Psyllid ID: psy3574

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300--
Protein Sequence
MSRVFNHFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEPDDDGEIPNVPQRIQSRLLTARNNHARNPNIDESEVFSLPDVSAPWNSTLST
Secondary Structure (PSIPRED)
ccEEcccccccEEEEEccccccccccEEEcccccccccccccHHHHHHHHHHHHHHcccccccccccccccccEEEEEcEEHHHcHHHHcccccccccccccHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccccEEEEccccccccccccccccccHHHHHHHHHHHcccccccccHHHHHccccccccccHHHHHHccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEHHHHHHHHHHHHcccccHHHHHHEEEcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEcHHHHHHHHHHHHHccccccccccccHHEEEEEcccccccHHHHHHHHHHHHHHHcccccccccccHHEEEEccccccccccccccccccHHHHHHHHHHHHccccccccHHHHHccHHHHcccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MSRVFNHFLQVAAVErkggynqqcdiWAVGITAIElaelqppmfdlhpmRALFlmsksgfkppalkdkdrcgdvkladfgvSAQITATINKRksfigtpywmapevaaverkggynqqcdiWAVGITAIElaelqppmfdlhpmRALFlmsksgfkppalkdkdrwssTFHNFVKIAltknpkkrptaDKLLQVILIHRARVAAVerkggynqqcdiwahpffkydMSKRVAIELLQKvsnppttytdlepdddgeipnvpQRIQSRLLTARnnharnpnidesevfslpdvsapwnstlst
Flexible Loop (DISEMBL)
MSRVFNHFLQVAAverkggynqQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLAdfgvsaqitatinkrksfigtpYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKialtknpkkrptaDKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKvsnppttytdlepdddgeipNVPQRIQSRLLTarnnharnpnidesevfslpdvsapwnstlst
Low Complexity Region (SEG)
MSRVFNHFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEPDDDGEIPNVPQRIQSRLLTARNNHARNPNIDESEVFSLPDVSAPWNSTLST
Disordered region (IsUnstruct)
***VFNHFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFK**ALKDKDRWSSTFHNFVKIALTKNP**RPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKV***************************************************************
Disordered Region (DISOPRED)
MSRVFNHFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG**********RWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGY*******************************************************************************************
Disordered Region (DISEMBL)
MSRVFNHFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEPDDDGEIPNVPQRIQSRLLTARNNHARNPNIDESEVFSLPDVSA********
Disordered Region (DISPRO)
MSRVFNHFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWA********SKR****LLQ*V***************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSRVFNHFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEPDDDGEIPNVPQRIQSRLLTARNNHARNPNIDESEVFSLPDVSAPWNSTLST
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	302	2.2.26 [Sep-21-2011]
Q8IVH8	894	Mitogen-activated protein	yes	N/A	0.781	0.263	0.535	7e-68
Q924I2	873	Mitogen-activated protein	yes	N/A	0.781	0.270	0.535	3e-67
Q99JP0	894	Mitogen-activated protein	yes	N/A	0.781	0.263	0.531	1e-66
Q9Y4K4	846	Mitogen-activated protein	no	N/A	0.589	0.210	0.616	2e-62
Q8BPM2	847	Mitogen-activated protein	no	N/A	0.589	0.210	0.626	4e-62
Q12851	820	Mitogen-activated protein	no	N/A	0.480	0.176	0.602	1e-55
Q61161	821	Mitogen-activated protein	no	N/A	0.509	0.187	0.576	4e-55
P70218	827	Mitogen-activated protein	no	N/A	0.413	0.151	0.720	3e-53
Q92918	833	Mitogen-activated protein	no	N/A	0.417	0.151	0.698	4e-51
Q0IHQ8	951	Serine/threonine-protein	no	N/A	0.397	0.126	0.532	3e-33

>sp|Q8IVH8|M4K3_HUMAN Mitogen-activated protein kinase kinase kinase kinase 3 OS=Homo sapiens GN=MAP4K3 PE=1 SV=1

 Score =  257 bits (657), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 145/271 (53%), Positives = 173/271 (63%), Gaps = 35/271 (12%)

Query: 13  AVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRC- 71
            +E  GG + Q DI+ V      L+ELQ        ++ L+ +   G     +K  +   
Sbjct: 89  CMEFCGGGSLQ-DIYHV---TGPLSELQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL 144

Query: 72  ---GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
              G VKLADFGVSAQITATI KRKSFIGTPYWMAPEVAAVERKGGYNQ CD+WAVGITA
Sbjct: 145 TDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDLWAVGITA 204

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
           IELAELQPPMFDLHPMRALFLM+KS F+PP LKDK +WS++FH+FVK+ALTKNPKKRPTA
Sbjct: 205 IELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTA 264

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPP-TTYT 247
           +KLLQ                          HPF    +++ +AIELL KV+NP  +TY 
Sbjct: 265 EKLLQ--------------------------HPFVTQHLTRSLAIELLDKVNNPDHSTYH 298

Query: 248 DLEPDDDGEIPNVPQRIQSRLLTARNNHARN 278
           D + DD   +  VP RI S     R    R+
Sbjct: 299 DFDDDDPEPLVAVPHRIHSTSRNVREEKTRS 329

May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q924I2|M4K3_RAT Mitogen-activated protein kinase kinase kinase kinase 3 OS=Rattus norvegicus GN=Map4k3 PE=1 SV=2

 Score =  255 bits (651), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 145/271 (53%), Positives = 173/271 (63%), Gaps = 35/271 (12%)

Query: 13  AVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRC- 71
            +E  GG + Q DI+ V      L+ELQ        ++ L+ +   G     +K  +   
Sbjct: 89  CMEFCGGGSLQ-DIYHV---TGPLSELQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL 144

Query: 72  ---GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
              G VKLADFGVSAQITATI KRKSFIGTPYWMAPEVAAVERKGGYNQ CD+WAVGITA
Sbjct: 145 TDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDLWAVGITA 204

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
           IELAELQPPMFDLHPMRALFLM+KS F+PP LKDK +WS++FH+FVK+ALTKNPKKRPTA
Sbjct: 205 IELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKLKWSNSFHHFVKMALTKNPKKRPTA 264

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPP-TTYT 247
           +KLLQ                          HPF    +++ +AIELL KV+NP  +TY 
Sbjct: 265 EKLLQ--------------------------HPFVTQPLTRSLAIELLDKVNNPDHSTYH 298

Query: 248 DLEPDDDGEIPNVPQRIQSRLLTARNNHARN 278
           D + DD   +  VP RI S     R    R+
Sbjct: 299 DFDDDDPEPLVAVPHRIPSTSRNVREEKTRS 329

May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q99JP0|M4K3_MOUSE Mitogen-activated protein kinase kinase kinase kinase 3 OS=Mus musculus GN=Map4k3 PE=1 SV=4

 Score =  253 bits (646), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 144/271 (53%), Positives = 172/271 (63%), Gaps = 35/271 (12%)

Query: 13  AVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRC- 71
            +E  GG + Q DI+ V      L+ELQ        ++ L+ +   G     +K  +   
Sbjct: 89  CMEFCGGGSLQ-DIYHV---TGPLSELQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL 144

Query: 72  ---GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
              G VKLADFGVSAQITATI KRKSFIGTPYWMAPEVAAVERKGGYNQ CD+WAVGITA
Sbjct: 145 TDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDLWAVGITA 204

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
           IELAELQPPMFDLHPMRALFLM+KS F+PP LKDK +WS++FH+FVK+ALTKNPKKRP A
Sbjct: 205 IELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKLKWSNSFHHFVKMALTKNPKKRPNA 264

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPP-TTYT 247
           +KLLQ                          HPF    +++ +AIELL KV+NP  +TY 
Sbjct: 265 EKLLQ--------------------------HPFVTQPLTRSLAIELLDKVNNPDHSTYH 298

Query: 248 DLEPDDDGEIPNVPQRIQSRLLTARNNHARN 278
           D + DD   +  VP RI S     R    R+
Sbjct: 299 DFDDDDPEPLVAVPHRIPSTSRNVREEKTRS 329

May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9Y4K4|M4K5_HUMAN Mitogen-activated protein kinase kinase kinase kinase 5 OS=Homo sapiens GN=MAP4K5 PE=1 SV=1

 Score =  239 bits (611), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 127/206 (61%), Positives = 144/206 (69%), Gaps = 28/206 (13%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGV+A+ITATI KRKSFIGTPYWMAPEVAAVE+ GGYNQ CDIWAVGITAIEL
Sbjct: 152 GDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 211

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            ELQPPMFDLHPMRALFLMSKS F+PP LKDK +WSSTFHNFVKIALTKNPKKRPTA++L
Sbjct: 212 GELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKIALTKNPKKRPTAERL 271

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEP 251
           L    +                     A P     +S+ +A+ELL KV+NP       E 
Sbjct: 272 LTHTFV---------------------AQP----GLSRALAVELLDKVNNPDNHAHYTEA 306

Query: 252 DDDGEIPNVPQRIQSRLLTARNNHAR 277
           DDD   P+    I    + + N +AR
Sbjct: 307 DDDDFEPHA---IIRHTIRSTNRNAR 329

May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8BPM2|M4K5_MOUSE Mitogen-activated protein kinase kinase kinase kinase 5 OS=Mus musculus GN=Map4k5 PE=2 SV=2

 Score =  238 bits (607), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 129/206 (62%), Positives = 144/206 (69%), Gaps = 28/206 (13%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGV+A+ITATI KRKSFIGTPYWMAPEVAAVE+ GGYNQ CDIWAVGITAIEL
Sbjct: 152 GDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 211

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            ELQPPMFDLHPMRALFLMSKS F+PP LKDK +WSSTFHNFVKIALTKNPKKRPTA++L
Sbjct: 212 GELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKIALTKNPKKRPTAERL 271

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFF-KYDMSKRVAIELLQKVSNPPTTYTDLE 250
           L                           H F  +  +S+ +A+ELL KVSNP       E
Sbjct: 272 L--------------------------THTFVGQPGLSRALAVELLDKVSNPDNHAPYSE 305

Query: 251 PDDDGEIPNVPQRIQSRLLTARNNHA 276
            D+D   P+   R   R  T RN+ A
Sbjct: 306 GDEDDLEPHAIIRHTIR-STNRNSRA 330

May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q12851|M4K2_HUMAN Mitogen-activated protein kinase kinase kinase kinase 2 OS=Homo sapiens GN=MAP4K2 PE=1 SV=2

 Score =  217 bits (552), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 103/171 (60%), Positives = 124/171 (72%), Gaps = 26/171 (15%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGVS ++TA++ KR+SFIGTPYWMAPEVAAVERKGGYN+ CD+WA+GITAIEL
Sbjct: 148 GDVKLADFGVSGELTASVAKRRSFIGTPYWMAPEVAAVERKGGYNELCDVWALGITAIEL 207

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            ELQPP+F LHPMRAL LMSKS F+PP L+DK RW+  FH+F+K+ALTKNPKKRPTA+KL
Sbjct: 208 GELQPPLFHLHPMRALMLMSKSSFQPPKLRDKTRWTQNFHHFLKLALTKNPKKRPTAEKL 267

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNP 242
           LQ                          HPF    + + +  +LL K S+P
Sbjct: 268 LQ--------------------------HPFTTQQLPRALLTQLLDKASDP 292

Serine/threonine-protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Acts as a MAPK kinase kinase kinase (MAP4K) and is an upstream activator of the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway and to a lesser extend of the p38 MAPKs signaling pathway. Required for the efficient activation of JNKs by TRAF6-dependent stimuli, including pathogen-associated molecular patterns (PAMPs) such as polyinosine-polycytidine (poly(IC)), lipopolysaccharides (LPS), lipid A, peptidoglycan (PGN), or bacterial flagellin. To a lesser degree, IL-1 and engagement of CD40 also stimulate MAP4K2-mediated JNKs activation. The requirement for MAP4K2/GCK is most pronounced for LPS signaling, and extends to LPS stimulation of c-Jun phosphorylation and induction of IL-8. Enhances MAP3K1 oligomerization, which may relieve N-terminal mediated MAP3K1 autoinhibition and lead to activation following autophosphorylation. Mediates also the SAP/JNK signaling pathway and the p38 MAPKs signaling pathway through activation of the MAP3Ks MAP3K10/MLK2 and MAP3K11/MLK3. May play a role in the regulation of vesicle targeting or fusion. regulation of vesicle targeting or fusion.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q61161|M4K2_MOUSE Mitogen-activated protein kinase kinase kinase kinase 2 OS=Mus musculus GN=Map4k2 PE=1 SV=1

 Score =  215 bits (547), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 105/182 (57%), Positives = 127/182 (69%), Gaps = 28/182 (15%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGVS ++TA++ KR+SFIGTPYWMAPEVAAVERKGGYN+ CD+WA+GITAIEL
Sbjct: 148 GDVKLADFGVSGELTASVAKRRSFIGTPYWMAPEVAAVERKGGYNELCDVWALGITAIEL 207

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            ELQPP+F LHPMRAL LMSKS F+PP L+DK RW+  FH+F+K+ALTKNPKKRPTA++L
Sbjct: 208 GELQPPLFHLHPMRALMLMSKSSFQPPKLRDKTRWTQNFHHFLKLALTKNPKKRPTAERL 267

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEP 251
           LQ                          HPF    +   +  +LL K S+P      L P
Sbjct: 268 LQ--------------------------HPFTTQHLPPALLTQLLDKASDP--HLGTLSP 299

Query: 252 DD 253
           +D
Sbjct: 300 ED 301

Serine/threonine-protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Acts as a MAPK kinase kinase kinase (MAP4K) and is an upstream activator of the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway and to a lesser extend of the p38 MAPKs signaling pathway. Required for the efficient activation of JNKs by TRAF6-dependent stimuli, including pathogen-associated molecular patterns (PAMPs) such as polyinosine-polycytidine (poly(IC)), lipopolysaccharides (LPS), lipid A, peptidoglycan (PGN),or bacterial flagellin. To a lesser degree, IL-1 and engagement of CD40 also stimulate MAP4K2-mediated JNKs activation. The requirement for MAP4K2/GCK is most pronounced for LPS signaling, and extends to LPS stimulation of c-Jun phosphorylation and induction of IL-8. Enhances MAP3K1 oligomerization, which may relieve N-terminal mediated MAP3K1 autoinhibition and lead to activation following autophosphorylation. Mediates also the SAP/JNK signaling pathway and the p38 MAPKs signaling pathway through activation of the MAP3Ks MAP3K10/MLK2 and MAP3K11/MLK3. May play a role in the regulation of vesicle targeting or fusion. regulation of vesicle targeting or fusion.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P70218|M4K1_MOUSE Mitogen-activated protein kinase kinase kinase kinase 1 OS=Mus musculus GN=Map4k1 PE=1 SV=1

 Score =  209 bits (531), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 93/129 (72%), Positives = 113/129 (87%)

Query: 71  CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIE 130
           CG+VKLADFG+SAQI AT+ +R SFIGTPYWMAPEVAAV  KGGYN+ CDIW++GITAIE
Sbjct: 148 CGEVKLADFGISAQIGATLARRLSFIGTPYWMAPEVAAVALKGGYNELCDIWSLGITAIE 207

Query: 131 LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           LAELQPP+FD+HP+R LFLM+KSG++PP LK+K RWSS+FHNFVK+ LTKN KKRP+A K
Sbjct: 208 LAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKSRWSSSFHNFVKVTLTKNSKKRPSATK 267

Query: 191 LLQVILIHR 199
           +L   L+ +
Sbjct: 268 MLSHQLVSQ 276

May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway. May play a role in hematopoietic lineage decisions and growth regulation.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q92918|M4K1_HUMAN Mitogen-activated protein kinase kinase kinase kinase 1 OS=Homo sapiens GN=MAP4K1 PE=1 SV=1

 Score =  201 bits (512), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 88/126 (69%), Positives = 111/126 (88%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G+V+LADFG+SAQI AT+ +R SFIGTPYWMAPEVAAV  KGGYN+ CDIW++GITAIEL
Sbjct: 149 GEVRLADFGISAQIGATLARRLSFIGTPYWMAPEVAAVALKGGYNELCDIWSLGITAIEL 208

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AELQPP+FD+HP+R LFLM+KSG++PP LK+K +WS+ FHNF+K+ LTK+PKKRP+A K+
Sbjct: 209 AELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKGKWSAAFHNFIKVTLTKSPKKRPSATKM 268

Query: 192 LQVILI 197
           L   L+
Sbjct: 269 LSHQLV 274

May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway. May play a role in hematopoietic lineage decisions and growth regulation.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q0IHQ8|STK10_XENTR Serine/threonine-protein kinase 10 OS=Xenopus tropicalis GN=stk10 PE=2 SV=1

 Score =  142 bits (359), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 66/124 (53%), Positives = 90/124 (72%), Gaps = 4/124 (3%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAI 129
           GD+KLADFGVSA+   T+ +R SFIGTPYWMAPEV   E  +   Y+ + DIW++GIT I
Sbjct: 169 GDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDAPYDYKADIWSLGITLI 228

Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           E+A+++PP  +L+PMR L  ++KS  +PP L    +WS  FHNF+K AL KNP+ RP+A 
Sbjct: 229 EMAQIEPPHHELNPMRVLLKIAKS--EPPTLSSPSKWSPEFHNFLKTALDKNPETRPSAA 286

Query: 190 KLLQ 193
           +LL+
Sbjct: 287 QLLE 290

May act as a polo kinase kinase by mediating phosphorylation of plk1/plx1 and subsequent activation of plk1/plx1 during oocyte maturation.

Xenopus tropicalis (taxid: 8364)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	302
332025920	897	Mitogen-activated protein kinase kinase	0.576	0.193	0.751	7e-80
189235723	761	PREDICTED: similar to mitogen-activated	0.615	0.244	0.712	1e-79
350407772	900	PREDICTED: mitogen-activated protein kin	0.576	0.193	0.746	3e-79
340717282	901	PREDICTED: mitogen-activated protein kin	0.576	0.193	0.746	4e-79
322792326	884	hypothetical protein SINV_06196 [Solenop	0.576	0.196	0.751	4e-79
340717284	896	PREDICTED: mitogen-activated protein kin	0.562	0.189	0.75	4e-79
383856072	900	PREDICTED: mitogen-activated protein kin	0.576	0.193	0.746	5e-79
383856074	896	PREDICTED: mitogen-activated protein kin	0.562	0.189	0.75	5e-79
270003381	857	hypothetical protein TcasGA2_TC002609 [T	0.639	0.225	0.688	5e-79
307191886	882	Mitogen-activated protein kinase kinase	0.576	0.197	0.741	2e-78

>gi|332025920|gb|EGI66076.1| Mitogen-activated protein kinase kinase kinase kinase 5 [Acromyrmex echinatior]

 Score =  303 bits (776), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 151/201 (75%), Positives = 162/201 (80%), Gaps = 27/201 (13%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQ CDIWA GITAIEL
Sbjct: 154 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWACGITAIEL 213

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AELQPPMFDLHPMRALFLMSKSGFKPP LKD+D+WS TFHNFVK+ALTKNPKKRPTA+KL
Sbjct: 214 AELQPPMFDLHPMRALFLMSKSGFKPPTLKDRDKWSPTFHNFVKVALTKNPKKRPTAEKL 273

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEP 251
           LQ                          H FF+ +MSKR+A+ELLQKVSNP   +TDLE 
Sbjct: 274 LQ--------------------------HAFFQGEMSKRLALELLQKVSNPSHMFTDLEA 307

Query: 252 DDDGEIPNVPQRIQSRLLTAR 272
           D+DG +PNVPQRI SR LTAR
Sbjct: 308 DEDGAVPNVPQRIASR-LTAR 327

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189235723|ref|XP_001807436.1| PREDICTED: similar to mitogen-activated protein kinase kinase kinase kinase 2-like [Tribolium castaneum]

 Score =  302 bits (774), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 156/219 (71%), Positives = 168/219 (76%), Gaps = 33/219 (15%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQ CDIWA+GITAIEL
Sbjct: 151 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAIGITAIEL 210

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AELQPPMFDLHPMRALFLMSKSGFKPP LKDK++WS TFHNFVK+ALTKNPKKRPTA+KL
Sbjct: 211 AELQPPMFDLHPMRALFLMSKSGFKPPTLKDKEKWSPTFHNFVKVALTKNPKKRPTAEKL 270

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEP 251
           LQ                          H FF+ DMSKR+AIELLQKV+NP   +T+ EP
Sbjct: 271 LQ--------------------------HAFFQGDMSKRLAIELLQKVNNPSHMFTE-EP 303

Query: 252 DDDGEIPNVPQRIQSRLL------TARNNHARNPNIDES 284
           DD+G IPNVPQRI SRL       +A N      NIDES
Sbjct: 304 DDEGAIPNVPQRIASRLTSRPKPQSAINISGEIENIDES 342

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350407772|ref|XP_003488189.1| PREDICTED: mitogen-activated protein kinase kinase kinase kinase 3-like [Bombus impatiens]

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 150/201 (74%), Positives = 161/201 (80%), Gaps = 27/201 (13%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQ CDIWA GITAIEL
Sbjct: 153 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWACGITAIEL 212

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AELQPPMFDLHPMRALFLMSKSGFKPP LKD+D+WS TFHNFVK+ALTKNPKKRPTA+KL
Sbjct: 213 AELQPPMFDLHPMRALFLMSKSGFKPPTLKDRDKWSPTFHNFVKVALTKNPKKRPTAEKL 272

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEP 251
           LQ                          H FF+ +MSKR+A+ELLQKVSNP   +TDLE 
Sbjct: 273 LQ--------------------------HAFFQGEMSKRLALELLQKVSNPSHMFTDLEA 306

Query: 252 DDDGEIPNVPQRIQSRLLTAR 272
           D+DG +PNVPQRI SR  TAR
Sbjct: 307 DEDGAVPNVPQRIASR-HTAR 326

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717282|ref|XP_003397114.1| PREDICTED: mitogen-activated protein kinase kinase kinase kinase 5-like isoform 1 [Bombus terrestris]

 Score =  300 bits (769), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 150/201 (74%), Positives = 161/201 (80%), Gaps = 27/201 (13%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQ CDIWA GITAIEL
Sbjct: 153 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWACGITAIEL 212

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AELQPPMFDLHPMRALFLMSKSGFKPP LKD+D+WS TFHNFVK+ALTKNPKKRPTA+KL
Sbjct: 213 AELQPPMFDLHPMRALFLMSKSGFKPPTLKDRDKWSPTFHNFVKVALTKNPKKRPTAEKL 272

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEP 251
           LQ                          H FF+ +MSKR+A+ELLQKVSNP   +TDLE 
Sbjct: 273 LQ--------------------------HAFFQGEMSKRLALELLQKVSNPSHMFTDLEA 306

Query: 252 DDDGEIPNVPQRIQSRLLTAR 272
           D+DG +PNVPQRI SR  TAR
Sbjct: 307 DEDGAVPNVPQRIASR-HTAR 326

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322792326|gb|EFZ16310.1| hypothetical protein SINV_06196 [Solenopsis invicta]

 Score =  300 bits (769), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 151/201 (75%), Positives = 161/201 (80%), Gaps = 27/201 (13%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQ CDIWA GITAIEL
Sbjct: 154 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWACGITAIEL 213

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AELQPPMFDLHPMRALFLMSKSGFKPP LKD+D+WS TFHNFVKIALTKNPKKRPTA+KL
Sbjct: 214 AELQPPMFDLHPMRALFLMSKSGFKPPTLKDRDKWSPTFHNFVKIALTKNPKKRPTAEKL 273

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEP 251
           LQ                          H FF+ +MSKR+A+ELLQKVSNP   +TDLE 
Sbjct: 274 LQ--------------------------HAFFQGEMSKRLALELLQKVSNPSHMFTDLEA 307

Query: 252 DDDGEIPNVPQRIQSRLLTAR 272
           D+DG +PNVPQRI SR  TAR
Sbjct: 308 DEDGAVPNVPQRIASR-HTAR 327

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717284|ref|XP_003397115.1| PREDICTED: mitogen-activated protein kinase kinase kinase kinase 5-like isoform 2 [Bombus terrestris]

 Score =  300 bits (769), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 147/196 (75%), Positives = 158/196 (80%), Gaps = 26/196 (13%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQ CDIWA GITAIEL
Sbjct: 153 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWACGITAIEL 212

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AELQPPMFDLHPMRALFLMSKSGFKPP LKD+D+WS TFHNFVK+ALTKNPKKRPTA+KL
Sbjct: 213 AELQPPMFDLHPMRALFLMSKSGFKPPTLKDRDKWSPTFHNFVKVALTKNPKKRPTAEKL 272

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEP 251
           LQ                          H FF+ +MSKR+A+ELLQKVSNP   +TDLE 
Sbjct: 273 LQ--------------------------HAFFQGEMSKRLALELLQKVSNPSHMFTDLEA 306

Query: 252 DDDGEIPNVPQRIQSR 267
           D+DG +PNVPQRI SR
Sbjct: 307 DEDGAVPNVPQRIASR 322

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383856072|ref|XP_003703534.1| PREDICTED: mitogen-activated protein kinase kinase kinase kinase 5-like isoform 1 [Megachile rotundata]

 Score =  300 bits (768), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 150/201 (74%), Positives = 161/201 (80%), Gaps = 27/201 (13%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQ CDIWA GITAIEL
Sbjct: 153 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWACGITAIEL 212

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AELQPPMFDLHPMRALFLMSKSGFKPP LKD+D+WS TFHNFVK+ALTKNPKKRPTA+KL
Sbjct: 213 AELQPPMFDLHPMRALFLMSKSGFKPPTLKDRDKWSPTFHNFVKVALTKNPKKRPTAEKL 272

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEP 251
           LQ                          H FF+ +MSKR+A+ELLQKVSNP   +TDLE 
Sbjct: 273 LQ--------------------------HAFFQGEMSKRLALELLQKVSNPSHMFTDLEA 306

Query: 252 DDDGEIPNVPQRIQSRLLTAR 272
           D+DG +PNVPQRI SR  TAR
Sbjct: 307 DEDGAVPNVPQRIASR-HTAR 326

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383856074|ref|XP_003703535.1| PREDICTED: mitogen-activated protein kinase kinase kinase kinase 5-like isoform 2 [Megachile rotundata]

 Score =  300 bits (768), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 147/196 (75%), Positives = 158/196 (80%), Gaps = 26/196 (13%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQ CDIWA GITAIEL
Sbjct: 154 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWACGITAIEL 213

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AELQPPMFDLHPMRALFLMSKSGFKPP LKD+D+WS TFHNFVK+ALTKNPKKRPTA+KL
Sbjct: 214 AELQPPMFDLHPMRALFLMSKSGFKPPTLKDRDKWSPTFHNFVKVALTKNPKKRPTAEKL 273

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEP 251
           LQ                          H FF+ +MSKR+A+ELLQKVSNP   +TDLE 
Sbjct: 274 LQ--------------------------HAFFQGEMSKRLALELLQKVSNPSHMFTDLEA 307

Query: 252 DDDGEIPNVPQRIQSR 267
           D+DG +PNVPQRI SR
Sbjct: 308 DEDGAVPNVPQRIASR 323

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270003381|gb|EEZ99828.1| hypothetical protein TcasGA2_TC002609 [Tribolium castaneum]

 Score =  300 bits (768), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 157/228 (68%), Positives = 171/228 (75%), Gaps = 35/228 (15%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQ CDIWA+GITAIEL
Sbjct: 151 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAIGITAIEL 210

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AELQPPMFDLHPMRALFLMSKSGFKPP LKDK++WS TFHNFVK+ALTKNPKKRPTA+KL
Sbjct: 211 AELQPPMFDLHPMRALFLMSKSGFKPPTLKDKEKWSPTFHNFVKVALTKNPKKRPTAEKL 270

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEP 251
           LQ                          H FF+ DMSKR+AIELLQKV+NP   +T+ EP
Sbjct: 271 LQ--------------------------HAFFQGDMSKRLAIELLQKVNNPSHMFTE-EP 303

Query: 252 DDDGEIPNVPQRIQSRLLTARNNHARNPNIDESEVFSLPDVSAPWNST 299
           DD+G IPNVPQRI SR LT+R    R  N       +LP     W+ T
Sbjct: 304 DDEGAIPNVPQRIASR-LTSRPKPQRATN-------ALPRDKQSWDVT 343

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307191886|gb|EFN75305.1| Mitogen-activated protein kinase kinase kinase kinase 5 [Harpegnathos saltator]

 Score =  298 bits (764), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 149/201 (74%), Positives = 160/201 (79%), Gaps = 27/201 (13%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQ CDIWA GITAIEL
Sbjct: 153 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWACGITAIEL 212

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AELQPPMFDLHPMRALFLMSKSGFKPP LKD+D+WS TFHNFVK+ALTKNPKKRPTA+KL
Sbjct: 213 AELQPPMFDLHPMRALFLMSKSGFKPPTLKDRDKWSPTFHNFVKVALTKNPKKRPTAEKL 272

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEP 251
           LQ                          H FF+ +MSKR+A+ELLQKVSNP   + DLE 
Sbjct: 273 LQ--------------------------HAFFQGEMSKRLALELLQKVSNPSHMFADLEA 306

Query: 252 DDDGEIPNVPQRIQSRLLTAR 272
           D+DG +PNVPQRI SR  TAR
Sbjct: 307 DEDGAVPNVPQRIASR-HTAR 326

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	302
FB|FBgn0263395	1218	hppy "happyhour" [Drosophila m	0.403	0.100	0.909	8.9e-66
UNIPROTKB|F1NLQ4	869	MAP4K3 "Mitogen-activated prot	0.403	0.140	0.877	1.9e-63
UNIPROTKB|F1N2U3	846	MAP4K5 "Mitogen-activated prot	0.447	0.159	0.804	1e-60
UNIPROTKB|F1NAN8	846	MAP4K5 "Mitogen-activated prot	0.400	0.143	0.892	2.1e-60
MGI|MGI:1925503	847	Map4k5 "mitogen-activated prot	0.447	0.159	0.804	2.8e-60
ZFIN|ZDB-GENE-030131-6497	878	map4k5 "mitogen-activated prot	0.417	0.143	0.793	3.4e-57
UNIPROTKB|F5H5A3	810	MAP4K3 "Mitogen-activated prot	0.701	0.261	0.590	4.6e-57
UNIPROTKB|Q8IVH8	894	MAP4K3 "Mitogen-activated prot	0.701	0.237	0.590	1.4e-56
ZFIN|ZDB-GENE-060512-339	889	zgc:136354 "zgc:136354" [Danio	0.403	0.137	0.811	1.8e-56
UNIPROTKB|F1S4T3	492	LOC100520016 "Uncharacterized	0.701	0.430	0.585	3.3e-56

FB|FBgn0263395 hppy "happyhour" [Drosophila melanogaster (taxid:7227)]

 Score = 596 (214.9 bits), Expect = 8.9e-66, Sum P(2) = 8.9e-66
 Identities = 111/122 (90%), Positives = 116/122 (95%)

Query:    72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
             GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQ CDIWA GITAIEL
Sbjct:   158 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWACGITAIEL 217

Query:   132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
             AELQPPMFDLHPMRALFLMSKSGFKPP L +KD+WS TFHNF+K ALTKNPKKRPTA++L
Sbjct:   218 AELQPPMFDLHPMRALFLMSKSGFKPPTLNNKDKWSPTFHNFIKTALTKNPKKRPTAERL 277

Query:   192 LQ 193
             LQ
Sbjct:   278 LQ 279

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=IGI;NAS

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=NAS

GO:0005524 "ATP binding" evidence=IEA

GO:0005083 "small GTPase regulator activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IGI

GO:0032008 "positive regulation of TOR signaling cascade" evidence=IGI

GO:0042059 "negative regulation of epidermal growth factor receptor signaling pathway" evidence=IGI

GO:0048149 "behavioral response to ethanol" evidence=IMP

GO:0070328 "triglyceride homeostasis" evidence=IMP

GO:0040009 "regulation of growth rate" evidence=IMP

GO:0008361 "regulation of cell size" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0032006 "regulation of TOR signaling cascade" evidence=IGI

GO:0043065 "positive regulation of apoptotic process" evidence=IMP

GO:0031931 "TORC1 complex" evidence=IPI

GO:0046626 "regulation of insulin receptor signaling pathway" evidence=IGI

GO:0046330 "positive regulation of JNK cascade" evidence=IMP

GO:0006915 "apoptotic process" evidence=IDA

GO:0007254 "JNK cascade" evidence=IDA

GO:0007030 "Golgi organization" evidence=IMP

UNIPROTKB|F1NLQ4 MAP4K3 "Mitogen-activated protein kinase kinase kinase kinase" [Gallus gallus (taxid:9031)]

 Score = 570 (205.7 bits), Expect = 1.9e-63, Sum P(2) = 1.9e-63
 Identities = 107/122 (87%), Positives = 116/122 (95%)

Query:    72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
             G VKLADFGVSAQITATI KRKSFIGTPYWMAPEVAAVERKGGYNQ CD+WAVGITAIEL
Sbjct:   144 GHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDLWAVGITAIEL 203

Query:   132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
             AELQPPMFDLHPMRALFLM+KS F+PP LKDK +WS++FH+FVK+ALTKNPKKRPTA+KL
Sbjct:   204 AELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKL 263

Query:   192 LQ 193
             LQ
Sbjct:   264 LQ 265

GO:0005083 "small GTPase regulator activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

UNIPROTKB|F1N2U3 MAP4K5 "Mitogen-activated protein kinase kinase kinase kinase" [Bos taurus (taxid:9913)]

 Score = 574 (207.1 bits), Expect = 1.0e-60, Sum P(2) = 1.0e-60
 Identities = 111/138 (80%), Positives = 121/138 (87%)

Query:    72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
             GDVKLADFGV+A+ITATI KRKSFIGTPYWMAPEVAAVE+ GGYNQ CDIWAVGITAIEL
Sbjct:   152 GDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 211

Query:   132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
              ELQPPMFDLHPMRALFLMSKS F+PP LKDK +WSSTFHNFVKIALTKNPKKRPTA++L
Sbjct:   212 GELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKIALTKNPKKRPTAERL 271

Query:   192 LQVILIHR---ARVAAVE 206
             L    + +   +R  AVE
Sbjct:   272 LTHTFVGQPGLSRALAVE 289

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005083 "small GTPase regulator activity" evidence=IEA

UNIPROTKB|F1NAN8 MAP4K5 "Mitogen-activated protein kinase kinase kinase kinase" [Gallus gallus (taxid:9031)]

 Score = 575 (207.5 bits), Expect = 2.1e-60, Sum P(2) = 2.1e-60
 Identities = 108/121 (89%), Positives = 115/121 (95%)

Query:    72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
             GDVKLADFGV+A+ITATI KRKSFIGTPYWMAPEVAAVE+ GGYNQ CDIWAVGITAIEL
Sbjct:   152 GDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 211

Query:   132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
             AELQPPMFDLHPMRALFLMSKS F+PP LK+K +WSSTFHNFVKIALTKNPKKRPTAD+L
Sbjct:   212 AELQPPMFDLHPMRALFLMSKSNFQPPKLKEKAKWSSTFHNFVKIALTKNPKKRPTADRL 271

Query:   192 L 192
             L
Sbjct:   272 L 272

GO:0005083 "small GTPase regulator activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

MGI|MGI:1925503 Map4k5 "mitogen-activated protein kinase kinase kinase kinase 5" [Mus musculus (taxid:10090)]

 Score = 574 (207.1 bits), Expect = 2.8e-60, Sum P(2) = 2.8e-60
 Identities = 111/138 (80%), Positives = 121/138 (87%)

Query:    72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
             GDVKLADFGV+A+ITATI KRKSFIGTPYWMAPEVAAVE+ GGYNQ CDIWAVGITAIEL
Sbjct:   152 GDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 211

Query:   132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
              ELQPPMFDLHPMRALFLMSKS F+PP LKDK +WSSTFHNFVKIALTKNPKKRPTA++L
Sbjct:   212 GELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKIALTKNPKKRPTAERL 271

Query:   192 LQVILIHR---ARVAAVE 206
             L    + +   +R  AVE
Sbjct:   272 LTHTFVGQPGLSRALAVE 289

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0005083 "small GTPase regulator activity" evidence=IEA

GO:0005524 "ATP binding" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=IEA;ISO

GO:0006950 "response to stress" evidence=ISO

GO:0007243 "intracellular protein kinase cascade" evidence=ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

ZFIN|ZDB-GENE-030131-6497 map4k5 "mitogen-activated protein kinase kinase kinase kinase 5" [Danio rerio (taxid:7955)]

 Score = 552 (199.4 bits), Expect = 3.4e-57, Sum P(2) = 3.4e-57
 Identities = 100/126 (79%), Positives = 115/126 (91%)

Query:    72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
             GDVKLADFGV+A+ITAT+ KRKSFIGTPYWMAPEVAAVE+ GGYN  CDIWAVGIT+IEL
Sbjct:   152 GDVKLADFGVAAKITATMAKRKSFIGTPYWMAPEVAAVEKNGGYNHLCDIWAVGITSIEL 211

Query:   132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
             AELQPPMFDLHPMRALFLMSKS F+PP LKDK +WS+ FHNFVK++LTKNPK+RPTA+K+
Sbjct:   212 AELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSTAFHNFVKLSLTKNPKRRPTAEKM 271

Query:   192 LQVILI 197
             L  + +
Sbjct:   272 LSHLFV 277

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0005083 "small GTPase regulator activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F5H5A3 MAP4K3 "Mitogen-activated protein kinase kinase kinase kinase" [Homo sapiens (taxid:9606)]

 Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
 Identities = 131/222 (59%), Positives = 152/222 (68%)

Query:    18 GGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRC----GD 73
             GG + Q DI+ V  T   L+ELQ        ++ L+ +   G     +K  +      G 
Sbjct:    31 GGGSLQ-DIYHV--TG-PLSELQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGH 86

Query:    74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
             VKLADFGVSAQITATI KRKSFIGTPYWMAPEVAAVERKGGYNQ CD+WAVGITAIELAE
Sbjct:    87 VKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDLWAVGITAIELAE 146

Query:   134 LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
             LQPPMFDLHPMRALFLM+KS F+PP LKDK +WS++FH+FVK+ALTKNPKKRPTA+KLLQ
Sbjct:   147 LQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 206

Query:   194 --VILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAI 233
                +  H  R  A+E     N       H F   D    VA+
Sbjct:   207 HPFVTQHLTRSLAIELLDKVNNPDHSTYHDFDDDDPEPLVAV 248

GO:0005083 "small GTPase regulator activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q8IVH8 MAP4K3 "Mitogen-activated protein kinase kinase kinase kinase 3" [Homo sapiens (taxid:9606)]

 Score = 587 (211.7 bits), Expect = 1.4e-56, P = 1.4e-56
 Identities = 131/222 (59%), Positives = 152/222 (68%)

Query:    18 GGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRC----GD 73
             GG + Q DI+ V  T   L+ELQ        ++ L+ +   G     +K  +      G 
Sbjct:    94 GGGSLQ-DIYHV--TG-PLSELQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGH 149

Query:    74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
             VKLADFGVSAQITATI KRKSFIGTPYWMAPEVAAVERKGGYNQ CD+WAVGITAIELAE
Sbjct:   150 VKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDLWAVGITAIELAE 209

Query:   134 LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
             LQPPMFDLHPMRALFLM+KS F+PP LKDK +WS++FH+FVK+ALTKNPKKRPTA+KLLQ
Sbjct:   210 LQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 269

Query:   194 --VILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAI 233
                +  H  R  A+E     N       H F   D    VA+
Sbjct:   270 HPFVTQHLTRSLAIELLDKVNNPDHSTYHDFDDDDPEPLVAV 311

GO:0005083 "small GTPase regulator activity" evidence=IEA

GO:0006950 "response to stress" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=IDA

GO:0004672 "protein kinase activity" evidence=TAS

GO:0007254 "JNK cascade" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

ZFIN|ZDB-GENE-060512-339 zgc:136354 "zgc:136354" [Danio rerio (taxid:7955)]

 Score = 549 (198.3 bits), Expect = 1.8e-56, Sum P(2) = 1.8e-56
 Identities = 99/122 (81%), Positives = 115/122 (94%)

Query:    72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
             GDVKLADFGV+A+I A++ KRKSFIGTPYWMAPEVAAVE+KGGYNQ CDIWAVGITAIEL
Sbjct:   147 GDVKLADFGVAAEINASVAKRKSFIGTPYWMAPEVAAVEKKGGYNQLCDIWAVGITAIEL 206

Query:   132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
             AELQPPMFDLHPMRAL LMSKS F+PP LK+K++WS+ FH+F+K+ALTKNP+KRPTA+K+
Sbjct:   207 AELQPPMFDLHPMRALMLMSKSSFQPPKLKEKNKWSTEFHSFIKMALTKNPRKRPTAEKI 266

Query:   192 LQ 193
             LQ
Sbjct:   267 LQ 268

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0005083 "small GTPase regulator activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F1S4T3 LOC100520016 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 130/222 (58%), Positives = 152/222 (68%)

Query:    18 GGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRC----GD 73
             GG + Q DI+ V  T   L+ELQ        ++ L+ +   G     +K  +      G 
Sbjct:    43 GGGSLQ-DIYHV--TG-PLSELQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGH 98

Query:    74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
             VKLADFGVSAQITATI KRKSFIGTPYWMAPEVAAVERKGGYNQ CD+WAVGITAIELAE
Sbjct:    99 VKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDLWAVGITAIELAE 158

Query:   134 LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
             LQPPMFDLHPMRALFLM+KS F+PP LKDK +WS++FH+FVK+ALTKNPKKRPTA+KLLQ
Sbjct:   159 LQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 218

Query:   194 VILIHR--ARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAI 233
                + +   R  A+E     N       H F   D    VA+
Sbjct:   219 HPFVTQPLTRSLAIELLDKVNNPDHSTYHDFDDDDPEPLVAV 260

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q99JP0	M4K3_MOUSE	2, ., 7, ., 1, 1, ., 1	0.5313	0.7814	0.2639	yes	N/A
Q8IVH8	M4K3_HUMAN	2, ., 7, ., 1, 1, ., 1	0.5350	0.7814	0.2639	yes	N/A
Q924I2	M4K3_RAT	2, ., 7, ., 1, 1, ., 1	0.5350	0.7814	0.2703	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	302
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-92
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	4e-79
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	3e-77
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-54
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	3e-54
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	8e-54
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	6e-53
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-49
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-48
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	8e-42
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	9e-40
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	6e-39
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	4e-38
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	6e-38
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	1e-37
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	6e-37
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-36
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	4e-36
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	6e-36
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	4e-35
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-33
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-33
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-32
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-32
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-32
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	4e-32
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	2e-31
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	1e-30
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-30
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	3e-30
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	1e-29
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-28
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-28
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	7e-28
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	7e-28
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	8e-28
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-27
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	8e-27
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-26
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	5e-26
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	8e-24
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	6e-23
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-22
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-22
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	4e-22
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-20
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-19
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-19
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	7e-19
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	3e-18
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-17
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	9e-17
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	1e-16
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-16
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-16
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	4e-16
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	4e-16
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	6e-16
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	9e-16
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-15
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-14
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-14
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	2e-14
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-14
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-14
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-14
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	3e-14
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-13
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-13
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-13
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-13
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	4e-13
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	4e-13
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	4e-13
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	1e-12
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	2e-12
smart00750	176	smart00750, KIND, kinase non-catalytic C-lobe doma	3e-12
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	3e-12
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	7e-12
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-11
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	2e-11
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-11
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-11
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-11
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	2e-11
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	4e-11
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	6e-11
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	7e-11
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-10
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	1e-10
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	1e-10
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-10
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-10
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	3e-10
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	4e-10
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	5e-10
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	7e-10
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	8e-10
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	8e-10
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-09
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-09
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-09
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-09
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	8e-09
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	1e-08
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-08
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-08
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	1e-08
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-08
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-08
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-08
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	2e-08
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	2e-08
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	3e-08
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	3e-08
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	4e-08
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	4e-08
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	4e-08
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	4e-08
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	6e-08
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	6e-08
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	2e-07
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	2e-07
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-07
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	3e-07
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	4e-07
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	4e-07
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	6e-07
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-06
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	1e-06
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	1e-06
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-06
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	1e-06
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	1e-06
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-06
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	1e-06
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-06
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	2e-06
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-06
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	2e-06
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-06
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	2e-06
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	3e-06
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	3e-06
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	3e-06
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	3e-06
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	4e-06
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	6e-06
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	6e-06
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	6e-06
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	6e-06
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	7e-06
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	8e-06
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	9e-06
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	1e-05
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	2e-05
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	2e-05
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-05
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-05
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	3e-05
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	3e-05
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	5e-05
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	6e-05
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	8e-05
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	8e-05
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	9e-05
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-04
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	1e-04
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	1e-04
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	1e-04
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	1e-04
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-04
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	2e-04
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	2e-04
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-04
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-04
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	3e-04
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	3e-04
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	3e-04
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	4e-04
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	5e-04
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	5e-04
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	5e-04
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	6e-04
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	6e-04
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	6e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	7e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	8e-04
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	8e-04
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	8e-04
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	0.001
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	0.001
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	0.001
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	0.001
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	0.002
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	0.002
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	0.002
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	0.002
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	0.002
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	0.002
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	0.002
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	0.002
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	0.002
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	0.003
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	0.003
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	0.003
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	0.003
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	0.004

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score =  275 bits (705), Expect = 1e-92
 Identities = 102/122 (83%), Positives = 112/122 (91%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGVSAQ+TATI KRKSFIGTPYWMAPEVAAVERKGGY+ +CDIWA+GITAIEL
Sbjct: 138 GDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIEL 197

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AELQPPMFDLHPMRALFL+SKS F PP LKDK++WS  FH+F+K  LTK+PKKRPTA KL
Sbjct: 198 AELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKL 257

Query: 192 LQ 193
           LQ
Sbjct: 258 LQ 259

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score =  241 bits (615), Expect = 4e-79
 Identities = 107/121 (88%), Positives = 115/121 (95%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGV+A+ITATI KRKSFIGTPYWMAPEVAAVE+ GGYNQ CDIWAVGITAIEL
Sbjct: 143 GDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 202

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AELQPPMFDLHPMRALFLMSKS F+PP LKDK +WSSTFHNFVKI+LTKNPKKRPTA++L
Sbjct: 203 AELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERL 262

Query: 192 L 192
           L
Sbjct: 263 L 263

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score =  236 bits (602), Expect = 3e-77
 Identities = 108/122 (88%), Positives = 116/122 (95%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKLADFGVSAQITATI KRKSFIGTPYWMAPEVAAVERKGGYNQ CDIWAVGITAIEL
Sbjct: 143 GHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIEL 202

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AELQPPMFDLHPMRALFLM+KS F+PP LKDK +WS++FH+FVK+ALTKNPKKRPTA+KL
Sbjct: 203 AELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKL 262

Query: 192 LQ 193
           LQ
Sbjct: 263 LQ 264

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score =  178 bits (453), Expect = 2e-54
 Identities = 69/133 (51%), Positives = 103/133 (77%), Gaps = 6/133 (4%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGVS Q+T+T++KR +F+GTP+WMAPEV    ++ GY+++ DIW++GITAIEL
Sbjct: 135 GDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVI---KQSGYDEKADIWSLGITAIEL 191

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           A+ +PP+ DLHPMR LFL+ K+   PP+L+  +++S  F +FV + L K+PK+RP+A +L
Sbjct: 192 AKGEPPLSDLHPMRVLFLIPKN--NPPSLEG-NKFSKPFKDFVSLCLNKDPKERPSAKEL 248

Query: 192 LQVILIHRARVAA 204
           L+   I +A+  +
Sbjct: 249 LKHKFIKKAKKTS 261

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score =  177 bits (450), Expect = 3e-54
 Identities = 61/124 (49%), Positives = 90/124 (72%), Gaps = 4/124 (3%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERK--GGYNQQCDIWAVGITAI 129
            +VKL DFGVSAQ+ +T+ +R +FIGTPYWMAPEV A + +    Y+ + D+W++GITAI
Sbjct: 150 AEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAI 209

Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           ELA+ +PP+ D+HPMRALF + ++   PP LK  + WS  F++F+   L KN ++RP  +
Sbjct: 210 ELADGKPPLCDMHPMRALFKIPRN--PPPTLKSPENWSKKFNDFISECLIKNYEQRPFME 267

Query: 190 KLLQ 193
           +LL+
Sbjct: 268 ELLE 271

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score =  175 bits (447), Expect = 8e-54
 Identities = 66/122 (54%), Positives = 90/122 (73%), Gaps = 5/122 (4%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G  KLADFGVS Q+T T+ KR + IGTP+WMAPEV    ++ GYN + DIW++GITAIE+
Sbjct: 136 GQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVI---QEIGYNNKADIWSLGITAIEM 192

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AE +PP  D+HPMRA+F++      PP L D ++WS  F++FVK  L K+P++RP+A +L
Sbjct: 193 AEGKPPYSDIHPMRAIFMIPNK--PPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQL 250

Query: 192 LQ 193
           LQ
Sbjct: 251 LQ 252

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  173 bits (440), Expect = 6e-53
 Identities = 63/122 (51%), Positives = 89/122 (72%), Gaps = 6/122 (4%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G+VKL DFG+SAQ++ T   R + +GTPYWMAPEV        Y+ + DIW++GITAIEL
Sbjct: 135 GEVKLIDFGLSAQLSDT-KARNTMVGTPYWMAPEVI---NGKPYDYKADIWSLGITAIEL 190

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AE +PP  +L PM+ALF ++ +G  PP L++ ++WS  F +F+K  L KNP+KRPTA++L
Sbjct: 191 AEGKPPYSELPPMKALFKIATNG--PPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQL 248

Query: 192 LQ 193
           L+
Sbjct: 249 LK 250

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  166 bits (422), Expect = 1e-49
 Identities = 62/122 (50%), Positives = 86/122 (70%), Gaps = 5/122 (4%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKLADFG +AQ+T   +KR S +GTPYWMAPEV  ++RK  Y  + DIW++GI  IE+
Sbjct: 153 GSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEV--IKRK-DYGPKVDIWSLGIMCIEM 209

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AE +PP     P+RALFL++  G   P LK+ ++WS  F +F+   L K+P+KRP+A++L
Sbjct: 210 AEGEPPYLREPPLRALFLITTKG--IPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEEL 267

Query: 192 LQ 193
           LQ
Sbjct: 268 LQ 269

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score =  162 bits (413), Expect = 1e-48
 Identities = 67/124 (54%), Positives = 91/124 (73%), Gaps = 4/124 (3%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAI 129
           GDVKLADFGVSA+  +T+ KR +FIGTPYWMAPEV A E  +   Y+ + DIW++GIT I
Sbjct: 140 GDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLI 199

Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           ELA+++PP  +L+PMR L  + KS  +PP L    +WSS+F++F+K  L K+P  RPTA 
Sbjct: 200 ELAQMEPPHHELNPMRVLLKILKS--EPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAA 257

Query: 190 KLLQ 193
           +LL+
Sbjct: 258 ELLK 261

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score =  145 bits (368), Expect = 8e-42
 Identities = 63/124 (50%), Positives = 89/124 (71%), Gaps = 4/124 (3%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAI 129
           GD+KLADFGVSA+   T+ +R SFIGTPYWMAPEV   E  +   Y+ + DIW++GIT I
Sbjct: 147 GDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLI 206

Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           E+A+++PP  +L+PMR L  ++KS  +PP L    +WS  F +F+K AL K+P+ RP+A 
Sbjct: 207 EMAQIEPPHHELNPMRVLLKIAKS--EPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAA 264

Query: 190 KLLQ 193
           +LL+
Sbjct: 265 QLLE 268

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score =  140 bits (353), Expect = 9e-40
 Identities = 65/128 (50%), Positives = 92/128 (71%), Gaps = 4/128 (3%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERK--GGYNQQCDIWAVGITAI 129
           G VKL DFGVSAQ+T+T  +R + +GTP+WMAPEV A E++    Y+ +CD+W++GITAI
Sbjct: 161 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAI 220

Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           EL +  PP+ DLHPMRALF + ++   PP L   + WS+ F++F++  LTK+ +KRPT  
Sbjct: 221 ELGDGDPPLADLHPMRALFKIPRN--PPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVS 278

Query: 190 KLLQVILI 197
            LLQ + I
Sbjct: 279 DLLQHVFI 286

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score =  137 bits (347), Expect = 6e-39
 Identities = 64/124 (51%), Positives = 88/124 (70%), Gaps = 5/124 (4%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERK--GGYNQQCDIWAVGITAI 129
            +VKL DFGVSAQ+  T+ +R +FIGTPYWMAPEV A +      Y+ + DIW++GITAI
Sbjct: 158 AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAI 217

Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           E+AE  PP+ D+HPMRALFL+ ++   PP LK K +WS  F +F++  L KN   RP+ +
Sbjct: 218 EMAEGAPPLCDMHPMRALFLIPRN--PPPKLKSK-KWSKKFIDFIEGCLVKNYLSRPSTE 274

Query: 190 KLLQ 193
           +LL+
Sbjct: 275 QLLK 278

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score =  135 bits (341), Expect = 4e-38
 Identities = 50/61 (81%), Positives = 57/61 (93%)

Query: 10  QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD 69
           +VAAVERKGGY+ +CDIWA+GITAIELAELQPPMFDLHPMRALFL+SKS F PP LKDK+
Sbjct: 171 EVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKE 230

Query: 70  R 70
           +
Sbjct: 231 K 231

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score =  134 bits (340), Expect = 6e-38
 Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 11/129 (8%)

Query: 72  GDVKLADFGVSAQI----TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT 127
           G VK+ADFGVSA +      T   RK+F+GTP WMAPEV  +E+  GY+ + DIW+ GIT
Sbjct: 139 GSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEV--MEQVHGYDFKADIWSFGIT 196

Query: 128 AIELAELQPPMFDLHPMRALFLMSKSGFKPPAL---KDKDRWSSTFHNFVKIALTKNPKK 184
           AIELA    P     PM+ L L  ++   PP+L    D  ++S +F   + + L K+P K
Sbjct: 197 AIELATGAAPYSKYPPMKVLMLTLQN--DPPSLETGADYKKYSKSFRKMISLCLQKDPSK 254

Query: 185 RPTADKLLQ 193
           RPTA++LL+
Sbjct: 255 RPTAEELLK 263

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score =  134 bits (339), Expect = 1e-37
 Identities = 65/124 (52%), Positives = 86/124 (69%), Gaps = 4/124 (3%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAI 129
           GD+KLADFGVSA+ T TI +R SFIGTPYWMAPEV   E  +   Y+ + D+W++GIT I
Sbjct: 140 GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 199

Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           E+A+++PP  +L+PMR L  ++KS  +PP L    RWSS F +F+K  L KN   R T  
Sbjct: 200 EMAQIEPPHHELNPMRVLLKIAKS--EPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTT 257

Query: 190 KLLQ 193
           +LLQ
Sbjct: 258 QLLQ 261

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score =  132 bits (334), Expect = 6e-37
 Identities = 67/128 (52%), Positives = 90/128 (70%), Gaps = 7/128 (5%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGV+ Q+T T  KR +F+GTP+WMAPEV    ++  Y+ + DIW++GITAIEL
Sbjct: 138 GDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI---KQSAYDFKADIWSLGITAIEL 194

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           A+ +PP  DLHPMR LFL+ K+   PP L+ +  +S  F  FV+  L K+P+ RPTA +L
Sbjct: 195 AKGEPPNSDLHPMRVLFLIPKN--SPPTLEGQ--YSKPFKEFVEACLNKDPRFRPTAKEL 250

Query: 192 LQVILIHR 199
           L+   I R
Sbjct: 251 LKHKFITR 258

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score =  131 bits (331), Expect = 2e-36
 Identities = 56/124 (45%), Positives = 87/124 (70%), Gaps = 4/124 (3%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERK--GGYNQQCDIWAVGITAI 129
           G VKL DFGVSAQ+T+T  +R + +GTP+WMAPEV A E++    Y+ +CD+W++GITAI
Sbjct: 165 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAI 224

Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           EL +  PP+FD+HP++ LF + ++   PP L   ++W  +F++F+   L K+ + RP+  
Sbjct: 225 ELGDGDPPLFDMHPVKTLFKIPRN--PPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVT 282

Query: 190 KLLQ 193
            LL+
Sbjct: 283 HLLE 286

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score =  131 bits (330), Expect = 4e-36
 Identities = 58/130 (44%), Positives = 85/130 (65%), Gaps = 7/130 (5%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKLADFG SA + +  N   SF+GTPYWMAPEV     +G Y+ + D+W++GIT IEL
Sbjct: 152 GTVKLADFG-SASLVSPAN---SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AE +PP+F+++ M AL+ ++++    P L   + WS  F NFV   L K P+ RP++++L
Sbjct: 208 AERKPPLFNMNAMSALYHIAQN--DSPTLS-SNDWSDYFRNFVDSCLQKIPQDRPSSEEL 264

Query: 192 LQVILIHRAR 201
           L+   + R R
Sbjct: 265 LKHRFVLRER 274

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score =  129 bits (326), Expect = 6e-36
 Identities = 62/124 (50%), Positives = 88/124 (70%), Gaps = 5/124 (4%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERK--GGYNQQCDIWAVGITAI 129
            +VKL DFGVSAQ+  T+ +R +FIGTPYWMAPEV A +      Y+ + D+W++GITAI
Sbjct: 148 AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAI 207

Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           E+AE  PP+ D+HPMRALFL+ ++    P LK K +WS  F +F++  L KN  +RPT +
Sbjct: 208 EMAEGAPPLCDMHPMRALFLIPRN--PAPRLKSK-KWSKKFQSFIESCLVKNHSQRPTTE 264

Query: 190 KLLQ 193
           +L++
Sbjct: 265 QLMK 268

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score =  127 bits (321), Expect = 4e-35
 Identities = 63/122 (51%), Positives = 84/122 (68%), Gaps = 7/122 (5%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGV+ Q+T T  KR +F+GTP+WMAPEV    ++  Y+ + DIW++GITAIEL
Sbjct: 138 GDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI---QQSAYDSKADIWSLGITAIEL 194

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           A+ +PP  D+HPMR LFL+ K    PP L  +  +S  F  F+   L K+P  RPTA +L
Sbjct: 195 AKGEPPNSDMHPMRVLFLIPK--NNPPTLTGE--FSKPFKEFIDACLNKDPSFRPTAKEL 250

Query: 192 LQ 193
           L+
Sbjct: 251 LK 252

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  122 bits (308), Expect = 3e-33
 Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 7/122 (5%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKLADFGV+ ++        S +GTPYWMAPEV  +    G +   DIW++G T IEL
Sbjct: 136 GVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMS---GASTASDIWSLGCTVIEL 192

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
               PP +DL+PM ALF + +    P      +  S    +F+     K+P  RPTA +L
Sbjct: 193 LTGNPPYYDLNPMAALFRIVQDDHPPLP----EGISPELKDFLMQCFQKDPNLRPTAKQL 248

Query: 192 LQ 193
           L+
Sbjct: 249 LK 250

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  121 bits (306), Expect = 5e-33
 Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 5/125 (4%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G VKLADFG++ Q+     K  +F+GTP +MAPEV       GY +  DIW++G+  
Sbjct: 131 DEDGHVKLADFGLARQLDPG-EKLTTFVGTPEYMAPEVL---LGKGYGKAVDIWSLGVIL 186

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            EL   +PP      +  LF       KPP    +   S    + ++  L K+P+KR TA
Sbjct: 187 YELLTGKPPFPGDDQLLELFKKIGKP-KPPFPPPEWDISPEAKDLIRKLLVKDPEKRLTA 245

Query: 189 DKLLQ 193
           ++ LQ
Sbjct: 246 EEALQ 250

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score =  121 bits (304), Expect = 1e-32
 Identities = 63/128 (49%), Positives = 86/128 (67%), Gaps = 7/128 (5%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G+VKLADFGV+ Q+T T  KR +F+GTP+WMAPEV    ++  Y+ + DIW++GITAIEL
Sbjct: 138 GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI---KQSAYDSKADIWSLGITAIEL 194

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           A+ +PP  +LHPM+ LFL+ K+   PP L+    +S     FV+  L K P  RPTA +L
Sbjct: 195 AKGEPPHSELHPMKVLFLIPKN--NPPTLEGN--YSKPLKEFVEACLNKEPSFRPTAKEL 250

Query: 192 LQVILIHR 199
           L+   I R
Sbjct: 251 LKHKFIVR 258

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score =  120 bits (301), Expect = 2e-32
 Identities = 52/61 (85%), Positives = 56/61 (91%)

Query: 10  QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD 69
           +VAAVE+ GGYNQ CDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS F+PP LKDK 
Sbjct: 176 EVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKT 235

Query: 70  R 70
           +
Sbjct: 236 K 236

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score =  121 bits (304), Expect = 2e-32
 Identities = 54/122 (44%), Positives = 78/122 (63%), Gaps = 5/122 (4%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G+VKL DFGV+A +    +KR +F+GTPYWMAPEV  +     Y+ + DIW++GIT  E+
Sbjct: 138 GNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEV--ITEGKYYDTKADIWSLGITIYEM 195

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           A   PP  D+   RA+ L+ KS  KPP L+D + +S     FV   L + PK+R +A++L
Sbjct: 196 ATGNPPYSDVDAFRAMMLIPKS--KPPRLED-NGYSKLLREFVAACLDEEPKERLSAEEL 252

Query: 192 LQ 193
           L+
Sbjct: 253 LK 254

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score =  119 bits (299), Expect = 4e-32
 Identities = 53/59 (89%), Positives = 56/59 (94%)

Query: 10  QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDK 68
           +VAAVERKGGYNQ CDIWAVGITAIELAELQPPMFDLHPMRALFLM+KS F+PP LKDK
Sbjct: 176 EVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDK 234

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score =  119 bits (298), Expect = 2e-31
 Identities = 61/134 (45%), Positives = 89/134 (66%), Gaps = 7/134 (5%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKLADFG SA I +  N   SF+GTPYWMAPEV     +G Y+ + D+W++GIT IEL
Sbjct: 162 GQVKLADFG-SASIASPAN---SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 217

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AE +PP+F+++ M AL+ ++++  + P L+  + WS  F NFV   L K P+ RPT+++L
Sbjct: 218 AERKPPLFNMNAMSALYHIAQN--ESPTLQSNE-WSDYFRNFVDSCLQKIPQDRPTSEEL 274

Query: 192 LQVILIHRARVAAV 205
           L+ + + R R   V
Sbjct: 275 LKHMFVLRERPETV 288

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score =  117 bits (293), Expect = 1e-30
 Identities = 61/134 (45%), Positives = 85/134 (63%), Gaps = 7/134 (5%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG SA I A  N    F+GTPYWMAPEV     +G Y+ + D+W++GIT IEL
Sbjct: 152 GLVKLGDFG-SASIMAPAN---XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AE +PP+F+++ M AL+ ++++  + PAL+    WS  F NFV   L K P+ RPT++ L
Sbjct: 208 AERKPPLFNMNAMSALYHIAQN--ESPALQ-SGHWSEYFRNFVDSCLQKIPQDRPTSEVL 264

Query: 192 LQVILIHRARVAAV 205
           L+   + R R   V
Sbjct: 265 LKHRFVLRERPPTV 278

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score =  116 bits (292), Expect = 1e-30
 Identities = 56/122 (45%), Positives = 82/122 (67%), Gaps = 5/122 (4%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG  AQIT   +KR + +GTPYWMAPEV  V RK  Y  + DIW++GI AIE+
Sbjct: 152 GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV--VTRK-AYGPKVDIWSLGIMAIEM 208

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            E +PP  + +P+RAL+L++ +G   P L++ ++ S+ F +F+   L  + +KR +A +L
Sbjct: 209 VEGEPPYLNENPLRALYLIATNG--TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKEL 266

Query: 192 LQ 193
           LQ
Sbjct: 267 LQ 268

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score =  114 bits (287), Expect = 3e-30
 Identities = 51/125 (40%), Positives = 74/125 (59%), Gaps = 6/125 (4%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G VKLADFG++ Q+    +  KSF G+PYWMAPEV  + ++GGY    DIW++G T 
Sbjct: 136 DTNGVVKLADFGMAKQVVE-FSFAKSFKGSPYWMAPEV--IAQQGGYGLAADIWSLGCTV 192

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
           +E+A  +PP   L  + A+F + +S   PP     D  S    +F+   L ++P  RPTA
Sbjct: 193 LEMATGKPPWSQLEGVAAVFKIGRSKELPPI---PDHLSDEAKDFILKCLQRDPSLRPTA 249

Query: 189 DKLLQ 193
            +LL+
Sbjct: 250 AELLE 254

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score =  113 bits (285), Expect = 1e-29
 Identities = 58/134 (43%), Positives = 87/134 (64%), Gaps = 7/134 (5%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKLADFG SA  ++  N   SF+GTPYWMAPEV     +G Y+ + D+W++GIT IEL
Sbjct: 158 GQVKLADFG-SASKSSPAN---SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 213

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AE +PP+F+++ M AL+ ++++    P L+  + W+ +F  FV   L K P++RP + +L
Sbjct: 214 AERKPPLFNMNAMSALYHIAQN--DSPTLQSNE-WTDSFRGFVDYCLQKIPQERPASAEL 270

Query: 192 LQVILIHRARVAAV 205
           L+   + R R A V
Sbjct: 271 LRHDFVRRDRPARV 284

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score =  110 bits (275), Expect = 3e-28
 Identities = 56/122 (45%), Positives = 81/122 (66%), Gaps = 5/122 (4%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG  AQIT   +KR + +GTPYWMAPEV  V RK  Y  + DIW++GI AIE+
Sbjct: 152 GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV--VTRK-AYGPKVDIWSLGIMAIEM 208

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            E +PP  + +P+RAL+L++ +G   P L++ +R S+ F +F+   L  +  +R +A +L
Sbjct: 209 VEGEPPYLNENPLRALYLIATNG--TPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKEL 266

Query: 192 LQ 193
           LQ
Sbjct: 267 LQ 268

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  109 bits (274), Expect = 3e-28
 Identities = 55/125 (44%), Positives = 75/125 (60%), Gaps = 9/125 (7%)

Query: 72  GDVKLADFGVSAQI--TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAI 129
           G VKLADFG + ++    T     S  GTPYWMAPEV    R   Y +  DIW++G T I
Sbjct: 138 GVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVI---RGEEYGRAADIWSLGCTVI 194

Query: 130 ELAELQPPMFDLH-PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
           E+A  +PP  +L  PM AL+ +  SG +PP + +    S    +F++  L ++PKKRPTA
Sbjct: 195 EMATGKPPWSELGNPMAALYKIGSSG-EPPEIPEHL--SEEAKDFLRKCLRRDPKKRPTA 251

Query: 189 DKLLQ 193
           D+LLQ
Sbjct: 252 DELLQ 256

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score =  109 bits (272), Expect = 7e-28
 Identities = 56/122 (45%), Positives = 81/122 (66%), Gaps = 5/122 (4%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG  AQIT   +KR + +GTPYWMAPEV  V RK  Y  + DIW++GI AIE+
Sbjct: 152 GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV--VTRK-AYGPKVDIWSLGIMAIEM 208

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            E +PP  + +P+RAL+L++ +G   P L++ ++ S  F +F+   L  + +KR +A +L
Sbjct: 209 VEGEPPYLNENPLRALYLIATNG--TPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKEL 266

Query: 192 LQ 193
           LQ
Sbjct: 267 LQ 268

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score =  109 bits (272), Expect = 7e-28
 Identities = 56/122 (45%), Positives = 82/122 (67%), Gaps = 5/122 (4%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG  AQIT   +KR + +GTPYWMAPEV  V RK  Y  + DIW++GI AIE+
Sbjct: 153 GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV--VTRK-AYGPKVDIWSLGIMAIEM 209

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            E +PP  + +P+RAL+L++ +G   P L++ ++ S+ F +F+   L  + +KR +A +L
Sbjct: 210 IEGEPPYLNENPLRALYLIATNG--TPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267

Query: 192 LQ 193
           LQ
Sbjct: 268 LQ 269

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score =  108 bits (272), Expect = 8e-28
 Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 5/122 (4%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL+DFG  AQ++  + +RKS +GTPYWMAPEV +      Y  + DIW++GI  IE+
Sbjct: 152 GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLP---YGTEVDIWSLGIMVIEM 208

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            + +PP F+  P++A+  +  +   PP LK+  + S    +F+   L ++P +R TA +L
Sbjct: 209 VDGEPPYFNEPPLQAMKRIRDN--LPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAEL 266

Query: 192 LQ 193
           L 
Sbjct: 267 LN 268

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score =  107 bits (269), Expect = 2e-27
 Identities = 52/122 (42%), Positives = 77/122 (63%), Gaps = 5/122 (4%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL+DFG  AQI+  + KRKS +GTPYWMAPEV +   +  Y  + DIW++GI  IE+
Sbjct: 154 GRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVIS---RTPYGTEVDIWSLGIMVIEM 210

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            + +PP F   P++A+  +  S   PP LK+  + S    +F++  LT+ P++R TA +L
Sbjct: 211 VDGEPPYFSDSPVQAMKRLRDS--PPPKLKNAHKISPVLRDFLERMLTREPQERATAQEL 268

Query: 192 LQ 193
           L 
Sbjct: 269 LD 270

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  105 bits (264), Expect = 8e-27
 Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 7/126 (5%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG+S  +++T++  K+ +GTPY+++PE+   + K  YN + DIW++G    EL
Sbjct: 140 GLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPEL--CQNK-PYNYKSDIWSLGCVLYEL 196

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
             L+ P F+   +  L L    G  PP      ++SS   N V   L K+P++RP+  ++
Sbjct: 197 CTLKHP-FEGENLLELALKILKGQYPP---IPSQYSSELRNLVSSLLQKDPEERPSIAQI 252

Query: 192 LQVILI 197
           LQ   I
Sbjct: 253 LQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score =  105 bits (263), Expect = 1e-26
 Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 9/128 (7%)

Query: 68  KDRCGDVKLADFGVSAQ---ITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           +D  G+VKL DFG S +   I ++    KS  GTPYWM+PEV + E   GY ++ D+W+V
Sbjct: 137 RDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGE---GYGRKADVWSV 193

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G T +E+   +PP  +   M A+F ++    +P   +     S    NF++    +N KK
Sbjct: 194 GCTVVEMLTEKPPWAEFEAMAAIFKIAT---QPTNPQLPSHVSPDARNFLRRTFVENAKK 250

Query: 185 RPTADKLL 192
           RP+A++LL
Sbjct: 251 RPSAEELL 258

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score =  103 bits (259), Expect = 5e-26
 Identities = 50/122 (40%), Positives = 77/122 (63%), Gaps = 5/122 (4%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G +KL+DFG  AQ++  + KRKS +GTPYWMAPEV +   +  Y  + DIW++GI  IE+
Sbjct: 155 GRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVIS---RLPYGTEVDIWSLGIMVIEM 211

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            + +PP F+  P++A+  +  +   PP +KD  + SS    F+ + L + P +R TA +L
Sbjct: 212 IDGEPPYFNEPPLQAMRRIRDN--LPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQEL 269

Query: 192 LQ 193
           LQ
Sbjct: 270 LQ 271

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 98.2 bits (244), Expect = 8e-24
 Identities = 48/129 (37%), Positives = 81/129 (62%), Gaps = 5/129 (3%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL+DFG  AQ++  + +RKS +GTPYWMAPE+ +   +  Y  + DIW++GI  IE+
Sbjct: 153 GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELIS---RLPYGPEVDIWSLGIMVIEM 209

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            + +PP F+  P++A+ ++  +   PP LK+  + S +   F+   L ++P +R TA +L
Sbjct: 210 VDGEPPYFNEPPLKAMKMIRDN--LPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAEL 267

Query: 192 LQVILIHRA 200
           L+   + +A
Sbjct: 268 LKHPFLAKA 276

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 95.1 bits (237), Expect = 6e-23
 Identities = 42/124 (33%), Positives = 70/124 (56%), Gaps = 7/124 (5%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G +KL DFGVS Q+  ++ K  +F+GT  +MAPE     +   Y+ + DIW++G++ IEL
Sbjct: 138 GQIKLCDFGVSGQLVNSLAK--TFVGTSSYMAPERI---QGNDYSVKSDIWSLGLSLIEL 192

Query: 132 AELQPPM--FDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           A  + P    +  P     L+     +PP      ++S  F +FV + L K+P++RP+  
Sbjct: 193 ATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYK 252

Query: 190 KLLQ 193
           +LL+
Sbjct: 253 ELLE 256

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 93.9 bits (234), Expect = 2e-22
 Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 4/124 (3%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VK+ADFG++ ++  + +   +F+GTP++MAPEV       GY  + D+W++G+   EL
Sbjct: 135 GVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGN--GYGPKVDVWSLGVILYEL 192

Query: 132 AELQPPMFDLHPMRALFLMSK--SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
              +PP    + +  L L+ +                S    + +K  L K+P KRPTA+
Sbjct: 193 LTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAE 252

Query: 190 KLLQ 193
           ++LQ
Sbjct: 253 EILQ 256

Length = 260

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 93.4 bits (233), Expect = 2e-22
 Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 7/124 (5%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG--YNQQCDIWAVGITAI 129
           G+VK+ADFG+S  +  T+++  +F+GT  +M+P     ER  G  Y+   DIW++G+T +
Sbjct: 137 GEVKIADFGISKVLENTLDQCNTFVGTVTYMSP-----ERIQGESYSYAADIWSLGLTLL 191

Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           E A  + P           LM      PP     + +S  F +F+   L K+PKKRP+A 
Sbjct: 192 ECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAA 251

Query: 190 KLLQ 193
           +LLQ
Sbjct: 252 ELLQ 255

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 93.1 bits (231), Expect = 4e-22
 Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 13/129 (10%)

Query: 72  GDVKLADFG-------VSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           G +KL DFG       V    T + N  KS  GTPYWMAPEV     + GY ++ DIW++
Sbjct: 139 GIIKLIDFGCARRLAWVGLHGTHS-NMLKSMHGTPYWMAPEVI---NESGYGRKSDIWSI 194

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G T  E+A  +PP+  +  + A+F +       P L   D +S+   +FV   LT++  +
Sbjct: 195 GCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRL--PDSFSAAAIDFVTSCLTRDQHE 252

Query: 185 RPTADKLLQ 193
           RP+A +LL+
Sbjct: 253 RPSALQLLR 261

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 88.8 bits (221), Expect = 1e-20
 Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 7/126 (5%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
            +VKL DFG++  +    +  K+++GTPY+M+PE         Y+++ DIW++G    EL
Sbjct: 147 NNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMS---YDEKSDIWSLGCLIYEL 203

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
             L PP F       L    K G          R+SS  +  +K  L  +P KRP+ ++L
Sbjct: 204 CALSPP-FTARNQLQLASKIKEGKFRRI---PYRYSSELNEVIKSMLNVDPDKRPSTEEL 259

Query: 192 LQVILI 197
           LQ+ LI
Sbjct: 260 LQLPLI 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 85.9 bits (213), Expect = 2e-19
 Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 14/133 (10%)

Query: 69  DRCGDVKLADFGVSAQITATINK-RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT 127
            R G VKL DFGVS ++   +N    +F GT ++MAPE     +   Y+   D+W++G+T
Sbjct: 139 TRKGQVKLCDFGVSGEL---VNSLAGTFTGTSFYMAPERI---QGKPYSITSDVWSLGLT 192

Query: 128 AIELAELQ---PPMFDLHPMRALFLMSKSGFKPPALKDKD----RWSSTFHNFVKIALTK 180
            +E+A+ +   PP  +        L        P LKD+     +WS  F +F+K  L K
Sbjct: 193 LLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEK 252

Query: 181 NPKKRPTADKLLQ 193
           +P +RPT   +L+
Sbjct: 253 DPTRRPTPWDMLE 265

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 85.5 bits (212), Expect = 2e-19
 Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 7/130 (5%)

Query: 69  DRCGDVKLADFGVSAQI----TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           D  G +KL DFG + ++    T    + +S  GTP +MAPEV    +  G+ +  DIW++
Sbjct: 133 DHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSL 192

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFK-PPALKDKDRWSSTFHNFVKIALTKNPK 183
           G   +E+A  + P  +L       +M   G    P + D  + S    +F+   L  +PK
Sbjct: 193 GCVVLEMATGKRPWSELDNEFQ--IMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPK 250

Query: 184 KRPTADKLLQ 193
           KRPTA +LLQ
Sbjct: 251 KRPTASELLQ 260

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 82.7 bits (205), Expect = 7e-19
 Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 38/126 (30%)

Query: 68  KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT 127
               G VKLADFG+S  +T+  +  K+ +GTP +MAPEV  +  KG Y+++ DIW++G+ 
Sbjct: 126 DSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEV--LLGKGYYSEKSDIWSLGVI 183

Query: 128 AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT 187
             EL EL+                                    + ++  L K+P+KRP+
Sbjct: 184 LYELPELK------------------------------------DLIRKMLQKDPEKRPS 207

Query: 188 ADKLLQ 193
           A ++L+
Sbjct: 208 AKEILE 213

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 82.0 bits (202), Expect = 3e-18
 Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 16/137 (11%)

Query: 68  KDRCGDVKLADFGVSAQ---ITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           +D  G+VKL DFG S +   I  +    KS  GTPYWM+PEV + E   GY ++ DIW+V
Sbjct: 139 RDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGE---GYGRKADIWSV 195

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFK---PPALKDKDRWSSTFHNFVKIALTKN 181
           G T +E+   +PP  +   M A+F ++        PP + D  R      +F+K    + 
Sbjct: 196 GCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCR------DFLKRIFVE- 248

Query: 182 PKKRPTADKLLQVILIH 198
            K RP+AD+LL+   +H
Sbjct: 249 AKLRPSADELLRHTFVH 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 80.2 bits (198), Expect = 1e-17
 Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 9/123 (7%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
             VK+ D G+S       N  K+ IGTP++MAPEV    +   Y+ + DIW++G    E+
Sbjct: 140 DLVKIGDLGISK--VLKKNMAKTQIGTPHYMAPEVW---KGRPYSYKSDIWSLGCLLYEM 194

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           A   PP F+   M+ L    + G  PP       +S    NF++  L   PK RP  DK+
Sbjct: 195 ATFAPP-FEARSMQDLRYKVQRGKYPPI---PPIYSQDLQNFIRSMLQVKPKLRPNCDKI 250

Query: 192 LQV 194
           L  
Sbjct: 251 LAS 253

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 78.1 bits (192), Expect = 9e-17
 Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 10/129 (7%)

Query: 68  KDRCGDVKLADFGVSAQITATI---NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           +D  G+VKL DFG S +I          KS  GTPYWM+PEV + E   GY ++ D+W+V
Sbjct: 139 RDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGE---GYGRKADVWSV 195

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
             T +E+   +PP  +   M A+F ++    KP      D  S    +F+K  +    K+
Sbjct: 196 ACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKP---MLPDGVSDACRDFLK-QIFVEEKR 251

Query: 185 RPTADKLLQ 193
           RPTA+ LL+
Sbjct: 252 RPTAEFLLR 260

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 77.7 bits (192), Expect = 1e-16
 Identities = 25/47 (53%), Positives = 37/47 (78%), Gaps = 2/47 (4%)

Query: 20  YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK 66
           Y+ + D+W++GITAIELA+ +PP+ D+HPMRALF + ++   PP LK
Sbjct: 195 YDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN--PPPTLK 239

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 76.9 bits (190), Expect = 2e-16
 Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 2/53 (3%)

Query: 16  RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDK 68
               Y+ + DIW++GITAIELAE +PP  +L PM+ALF ++ +G  PP L++ 
Sbjct: 170 NGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNG--PPGLRNP 220

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 76.5 bits (189), Expect = 3e-16
 Identities = 27/51 (52%), Positives = 37/51 (72%), Gaps = 2/51 (3%)

Query: 17  KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD 67
           + GYN + DIW++GITAIE+AE +PP  D+HPMRA+F++      PP L D
Sbjct: 173 EIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK--PPPTLSD 221

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 76.3 bits (187), Expect = 4e-16
 Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 10/129 (7%)

Query: 68  KDRCGDVKLADFGVSAQ---ITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           +D  G+VKL DFG S +   I  +    +S  GTPYWM+PEV + E   GY ++ D+W++
Sbjct: 139 RDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGE---GYGRKADVWSL 195

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G T +E+   +PP  +   M A+F ++     P         S    +F+     +  + 
Sbjct: 196 GCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQL---PSHISEHARDFLGCIFVE-ARH 251

Query: 185 RPTADKLLQ 193
           RP+A++LL+
Sbjct: 252 RPSAEELLR 260

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 76.6 bits (189), Expect = 4e-16
 Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 3/146 (2%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPE-VAAVERKGGYNQQCDIWAVGIT 127
           D  G+VKL DFG+S ++  +  K +S  G   +MAPE +   +    Y+ + D+W++GI+
Sbjct: 149 DASGNVKLCDFGISGRLVDSKAKTRS-AGCAAYMAPERIDPPDPNPKYDIRADVWSLGIS 207

Query: 128 AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT 187
            +ELA  Q P +         L      +PP+L   + +S  F +FV + LTK+ +KRP 
Sbjct: 208 LVELATGQFP-YKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPK 266

Query: 188 ADKLLQVILIHRARVAAVERKGGYNQ 213
             +LLQ   I R   A V+  G +  
Sbjct: 267 YRELLQHPFIRRYETAEVDVAGWFQD 292

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 75.2 bits (186), Expect = 6e-16
 Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 31/155 (20%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +KL DFG++ ++++  ++  +F GTP ++APEV       GY +  D W++G+  
Sbjct: 127 DADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVL---LGKGYGKAVDWWSLGVLL 183

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E+   +PP F     + ++           L+  +  S    + +   L K+P KR   
Sbjct: 184 YEMLTGKPP-FYAEDRKEIYEKILKD----PLRFPEFLSPEARDLISGLLQKDPTKRL-- 236

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFF 223
                                G     +I AHPFF
Sbjct: 237 ---------------------GSGGAEEIKAHPFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 75.3 bits (186), Expect = 9e-16
 Identities = 29/54 (53%), Positives = 43/54 (79%), Gaps = 2/54 (3%)

Query: 14  VERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD 67
           V ++ GY+++ DIW++GITAIELA+ +PP+ DLHPMR LFL+ K+   PP+L+ 
Sbjct: 169 VIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN--NPPSLEG 220

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 74.4 bits (183), Expect = 2e-15
 Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 8/136 (5%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKG-GYNQQCDIWAVGIT 127
           +R G VKL DFG+S  +  ++ K       PY MAPE    E    GY+ + D+W++GIT
Sbjct: 138 NRNGQVKLCDFGISGYLVDSVAKTIDAGCKPY-MAPERINPELNQKGYDVKSDVWSLGIT 196

Query: 128 AIELAELQPPMFDLHPMRALFLMSKSGFK--PPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            IELA  + P          F   K   +   P L   +++S  F +FV   L KN K+R
Sbjct: 197 MIELATGRFPYDSWKTP---FQQLKQVVEEPSPQLP-AEKFSPEFQDFVNKCLKKNYKER 252

Query: 186 PTADKLLQVILIHRAR 201
           P   +LLQ        
Sbjct: 253 PNYPELLQHPFFELHL 268

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 73.2 bits (178), Expect = 1e-14
 Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 14/155 (9%)

Query: 61  KPPALKDKDRCGDVKLADFGVSAQITATINKR------KSFIGTPYWMAPEVAAVERKGG 114
           KP  +        VKL DFG++  +    +         + +GTP +MAPEV        
Sbjct: 128 KPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAY 187

Query: 115 YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK------SGFKPPALKDKDRW-- 166
            +   DIW++GIT  EL    PP        A     K      +      L   +    
Sbjct: 188 ASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELI 247

Query: 167 SSTFHNFVKIALTKNPKKRPTADKLLQVILIHRAR 201
           S    + +K  L K+PK R ++   L   L+   +
Sbjct: 248 SKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLK 282

Length = 384

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 72.1 bits (177), Expect = 1e-14
 Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 6/124 (4%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL D G+    ++      S +GTPY+M+PE      + GYN + DIW++G    E+
Sbjct: 143 GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI---HENGYNFKSDIWSLGCLLYEM 199

Query: 132 AELQPPMF-DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           A LQ P + D   + +L    +    PP     D +S    + V   +  +P+KRP    
Sbjct: 200 AALQSPFYGDKMNLYSLCKKIEKCDYPPL--PADHYSEELRDLVSRCINPDPEKRPDISY 257

Query: 191 LLQV 194
           +LQV
Sbjct: 258 VLQV 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 71.4 bits (175), Expect = 2e-14
 Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 7/128 (5%)

Query: 70  RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAI 129
           + G +KL DFG++  + +T+   ++ IGTPY+++PE+   E +  YN + DIWA+G    
Sbjct: 136 KDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEI--CENR-PYNNKSDIWALGCVLY 192

Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           E+  L+   F+   M+ L L    G  PP       +S    N V     +NP+ RP+ +
Sbjct: 193 EMCTLKHA-FEAGNMKNLVLKIIRGSYPPV---SSHYSYDLRNLVSQLFKRNPRDRPSVN 248

Query: 190 KLLQVILI 197
            +L+   I
Sbjct: 249 SILEKNFI 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 72.0 bits (177), Expect = 2e-14
 Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 4/126 (3%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           DR G++KL DFG+S Q+  +I K +     PY MAPE      + GY+ + D+W++GIT 
Sbjct: 142 DRNGNIKLCDFGISGQLVDSIAKTRDAGCRPY-MAPERIDPSARDGYDVRSDVWSLGITL 200

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALK--DKDRWSSTFHNFVKIALTKNPKKRP 186
            E+A  + P    + +         G  PP L   ++  +S +F NF+ + L K+  KRP
Sbjct: 201 YEVATGKFPYPKWNSVFDQLTQVVKG-DPPILSNSEEREFSPSFVNFINLCLIKDESKRP 259

Query: 187 TADKLL 192
              +LL
Sbjct: 260 KYKELL 265

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 71.4 bits (175), Expect = 2e-14
 Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 7/125 (5%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D   +VK+ D GV+  ++   N   + +GTPY+++PE+   E K  YN++ D+WA+G+  
Sbjct: 135 DAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELC--EDK-PYNEKSDVWALGVVL 191

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E    + P FD +   AL L    G  PP       +S      +   LTK+ ++RP  
Sbjct: 192 YECCTGKHP-FDANNQGALILKIIRGVFPPV---SQMYSQQLAQLIDQCLTKDYRQRPDT 247

Query: 189 DKLLQ 193
            +LL+
Sbjct: 248 FQLLR 252

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 71.4 bits (175), Expect = 2e-14
 Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 13/128 (10%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G +KL DFGVS ++  +I    +F+GT  +M+PE     + G Y  + D+W++GI+ IEL
Sbjct: 141 GQIKLCDFGVSGELINSI--ADTFVGTSTYMSPERI---QGGKYTVKSDVWSLGISIIEL 195

Query: 132 AELQPPMFD--------LHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPK 183
           A  + P             PM  L L+ +   +PP       +     +FV   L K+P 
Sbjct: 196 ALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPT 255

Query: 184 KRPTADKL 191
           +RPT  +L
Sbjct: 256 ERPTPQQL 263

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 71.4 bits (175), Expect = 3e-14
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 10/127 (7%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE---RKGGYNQQCDIWAVGITA 128
           G VKL DFGVS  + A++ K    IG   +MAPE        +   Y  Q D+W++G++ 
Sbjct: 140 GQVKLCDFGVSGNLVASLAKTN--IGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSI 197

Query: 129 IELAELQPPMFDLHPMRALF--LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
           +E+A  + P +       +F  L +     PP L     +S    +FV   L K P +RP
Sbjct: 198 LEMALGRYP-YPPETYANIFAQLSAIVDGDPPTLPSG--YSDDAQDFVAKCLNKIPNRRP 254

Query: 187 TADKLLQ 193
           T  +LL+
Sbjct: 255 TYAQLLE 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 69.2 bits (170), Expect = 1e-13
 Identities = 38/164 (23%), Positives = 60/164 (36%), Gaps = 37/164 (22%)

Query: 69  DRCGDVKLADFGVSAQ--------ITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCD 120
           D  G +KL DFG+S          +     + K  +GTP ++APEV  +  + G+++  D
Sbjct: 127 DSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEV--ILGQ-GHSKTVD 183

Query: 121 IWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            W++G    E     PP     P   +F    +G       +    S    + +   L  
Sbjct: 184 WWSLGCILYEFLVGIPPFHGETPE-EIFQNILNGKIEW--PEDVEVSDEAIDLISKLLVP 240

Query: 181 NPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
           +P+KR                        G     +I  HPFFK
Sbjct: 241 DPEKRL-----------------------GAKSIEEIKNHPFFK 261

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 69.0 bits (169), Expect = 1e-13
 Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 9/124 (7%)

Query: 70  RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPE-VAAVERKGGYNQQCDIWAVGITA 128
           + G +KL DFG+S  + +  +  ++ +GTPY+M+PE    V+    YN + DIWA+G   
Sbjct: 136 KAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVK----YNFKSDIWALGCVL 191

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            EL  L+   FD      L +    G   P       +SS   + V   L ++P+KRPTA
Sbjct: 192 YELLTLK-RTFDATNPLNLVVKIVQGNYTPV---VSVYSSELISLVHSLLQQDPEKRPTA 247

Query: 189 DKLL 192
           D++L
Sbjct: 248 DEVL 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 68.7 bits (168), Expect = 2e-13
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 6/129 (4%)

Query: 69  DRCGDVKLADFGVSAQITATI---NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG 125
           D  G  K++DFG+S + +  I   ++  S  G+ +WMAPEV     +G Y+ + DIW++G
Sbjct: 142 DADGICKISDFGISKK-SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQG-YSAKVDIWSLG 199

Query: 126 ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-KDRWSSTFHNFVKIALTKNPKK 184
              +E+   + P  D   + A+F +      PP   D     S    +F+    T NP  
Sbjct: 200 CVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDN 259

Query: 185 RPTADKLLQ 193
           RPTA +LLQ
Sbjct: 260 RPTARELLQ 268

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 68.4 bits (167), Expect = 2e-13
 Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 15/133 (11%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFGVS Q+  +I   K+++GT  +MAPE  + E+   Y    D+W++GI+ +EL
Sbjct: 132 GQVKLCDFGVSTQLVNSI--AKTYVGTNAYMAPERISGEQ---YGIHSDVWSLGISFMEL 186

Query: 132 A-------ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           A       ++Q     L P++ L  +      PP L     +S  F +F+   + K PK+
Sbjct: 187 ALGRFPYPQIQKNQGSLMPLQLLQCIVDE--DPPVLPVGQ-FSEKFVHFITQCMRKQPKE 243

Query: 185 RPTADKLLQVILI 197
           RP  + L+    I
Sbjct: 244 RPAPENLMDHPFI 256

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 68.0 bits (167), Expect = 4e-13
 Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)

Query: 20  YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR 70
           Y  + DIW++GI  IE+AE +PP     P+RALFL++  G   P LK+ ++
Sbjct: 193 YGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKG--IPPLKNPEK 241

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 67.6 bits (165), Expect = 4e-13
 Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 15/131 (11%)

Query: 69  DRCGDVKLADFGVSAQ------ITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIW 122
           D  G +K++DFG+S +       T T   R S  G+ +WMAPEV    ++  Y ++ DIW
Sbjct: 140 DNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVV---KQTSYTRKADIW 196

Query: 123 AVGITAIELAELQPPMFDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKN 181
           ++G   +E+   + P  D   ++A+F +   +  + P        SS   +F++     +
Sbjct: 197 SLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIP-----SNISSEAIDFLEKTFEID 251

Query: 182 PKKRPTADKLL 192
             KRPTA +LL
Sbjct: 252 HNKRPTAAELL 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 67.5 bits (165), Expect = 4e-13
 Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 9/125 (7%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKG--GYNQQCDIWAVGITAI 129
           G VK++DFG S ++       ++F GT  +MAPEV     KG  GY    DIW++G T +
Sbjct: 146 GVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVI---DKGPRGYGAPADIWSLGCTIV 202

Query: 130 ELAELQPPMFDL-HPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
           E+A  +PP  +L  P  A+F   K G      +  +  S+   NF+      +P KR +A
Sbjct: 203 EMATGKPPFIELGEPQAAMF---KVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASA 259

Query: 189 DKLLQ 193
             LLQ
Sbjct: 260 HDLLQ 264

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 67.0 bits (164), Expect = 1e-12
 Identities = 41/156 (26%), Positives = 58/156 (37%), Gaps = 60/156 (38%)

Query: 100 YWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPA 159
            W++PEV   +   GYN++ DI++VGITA ELA    P  D+       L+ K     P 
Sbjct: 173 PWLSPEVLQ-QNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT--QMLLEKVRGTVPC 229

Query: 160 LKDKD-------------------------------RWSSTFHNFVKIALTKNPKKRPTA 188
           L DK                                 +S  FH FV++ L ++P+ RP+A
Sbjct: 230 LLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSA 289

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
            +LL                           H FFK
Sbjct: 290 SQLL--------------------------NHSFFK 299

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 65.9 bits (161), Expect = 2e-12
 Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 44/171 (25%)

Query: 72  GDVKLADFGVSAQ-ITATINKRKSFIGTPYWMAPEVAAVERKGG--YNQQCDIWAVGITA 128
           G++KL DFGVS Q I +  N   SF+GT  +M+P     ER  G  Y  Q DIW++G++ 
Sbjct: 137 GEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSP-----ERLQGTHYTVQSDIWSLGLSL 188

Query: 129 IELA----ELQPP-------MFD----------------LHPMR-----ALF-LMSKSGF 155
           +E+A     + PP       MF                  HP       A+F L+     
Sbjct: 189 VEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVN 248

Query: 156 KPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVE 206
           +PP       +S  F +FV   L KNPK+R    +L +   I RA +  V+
Sbjct: 249 EPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAELEEVD 299

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain

 Score = 63.6 bits (155), Expect = 3e-12
 Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 13/137 (9%)

Query: 71  CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIE 130
             D  L   G  A  T   +        PY+MAPEV   +    Y ++ DI+++GIT  E
Sbjct: 45  TWDGLLKLDGSVAFKTPEQS-----RPDPYFMAPEVIQGQ---SYTEKADIYSLGITLYE 96

Query: 131 LAELQPPMFDLHPMRALFLMSKSG---FKPPALKDKDRWSS--TFHNFVKIALTKNPKKR 185
             + + P  +   + A+  +  +G     P    + +  S+  +F +F+++  ++ P++R
Sbjct: 97  ALDYELPYNEERELSAILEILLNGMPADDPRDRSNLEGVSAARSFEDFMRLCASRLPQRR 156

Query: 186 PTADKLLQVILIHRARV 202
             A+  L       A  
Sbjct: 157 EAANHYLAHCRALFAET 173

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 64.9 bits (158), Expect = 3e-12
 Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           VK+ DFG+S +I ++ +K  + +GTP +++PE+   E K  YNQ+ DIWA+G    ELA 
Sbjct: 141 VKIGDFGIS-KILSSKSKAYTVVGTPCYISPELC--EGKP-YNQKSDIWALGCVLYELAS 196

Query: 134 LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLL 192
           L+   F+   + AL L   SG   P     DR+S      +   L  +P KRP   +++
Sbjct: 197 LKRA-FEAANLPALVLKIMSGTFAPI---SDRYSPDLRQLILSMLNLDPSKRPQLSQIM 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 64.3 bits (156), Expect = 7e-12
 Identities = 28/49 (57%), Positives = 38/49 (77%), Gaps = 2/49 (4%)

Query: 20  YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDK 68
           Y+ + DIW++GITAIE+AE  PP+ D+HPMRALFL+ ++   PP LK K
Sbjct: 203 YDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN--PPPKLKSK 249

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 63.3 bits (154), Expect = 1e-11
 Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 11/127 (8%)

Query: 73  DVKLADFGVSAQITATINK----RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
            +++ADFG +A++ A        +   +GT  +MAPEV    R   Y + CD+W+VG   
Sbjct: 142 RLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVL---RGEQYGRSCDVWSVGCVI 198

Query: 129 IELAELQPPMFDLHPMRALFLMSK--SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
           IE+A  +PP         L L+ K  S    P++   +  S    +     L   P+ RP
Sbjct: 199 IEMATAKPPWNAEKHSNHLALIFKIASATTAPSI--PEHLSPGLRDVTLRCLELQPEDRP 256

Query: 187 TADKLLQ 193
            + +LL+
Sbjct: 257 PSRELLK 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 64.1 bits (156), Expect = 2e-11
 Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 9/123 (7%)

Query: 72  GDVKLADFGVSAQITATINKR--KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAI 129
           G VKL DFG S    AT++    ++F GTPY++APE+    R+  Y+++ D++++G+   
Sbjct: 180 GLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIW---RRKPYSKKADMFSLGVLLY 236

Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           EL  L+ P FD   M  +   + +G   P        S      V   L+ +PK+RP++ 
Sbjct: 237 ELLTLKRP-FDGENMEEVMHKTLAGRYDPL---PPSISPEMQEIVTALLSSDPKRRPSSS 292

Query: 190 KLL 192
           KLL
Sbjct: 293 KLL 295

Length = 496

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 62.7 bits (152), Expect = 2e-11
 Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 11/123 (8%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG +  +T+      +++GTPY++ PE+        YN + DIW++G    EL
Sbjct: 137 GKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIW---ENMPYNNKSDIWSLGCILYEL 193

Query: 132 AELQPPMFDLHPMRALFL-MSKSGFKP-PALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
             L+ P F  +  + L L + +  +KP P+      +S    + +K    +NP+ RP+A 
Sbjct: 194 CTLKHP-FQANSWKNLILKVCQGSYKPLPS-----HYSYELRSLIKQMFKRNPRSRPSAT 247

Query: 190 KLL 192
            +L
Sbjct: 248 TIL 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 62.6 bits (153), Expect = 2e-11
 Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 15/122 (12%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G VKL DFG + ++  +  K  +F GTP ++APE+  +  K GY+   D W++GI  
Sbjct: 127 DSNGYVKLVDFGFAKKL-KSGQKTWTFCGTPEYVAPEI--ILNK-GYDFSVDYWSLGILL 182

Query: 129 IELAELQPPMF---DLHPMR--ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPK 183
            EL   +PP F   D  PM      L      + P   DK        + +K  L +NP+
Sbjct: 183 YELLTGRPP-FGEDDEDPMEIYNDILKGNGKLEFPNYIDKA-----AKDLIKQLLRRNPE 236

Query: 184 KR 185
           +R
Sbjct: 237 ER 238

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 62.7 bits (152), Expect = 2e-11
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 6/124 (4%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL D G+    ++      S +GTPY+M+PE      + GYN + DIW++G    E+
Sbjct: 143 GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI---HENGYNFKSDIWSLGCLLYEM 199

Query: 132 AELQPPMF-DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           A LQ P + D   + +L    +    PP     + +S      V + +  +P +RP    
Sbjct: 200 AALQSPFYGDKMNLFSLCQKIEQCDYPPL--PTEHYSEKLRELVSMCIYPDPDQRPDIGY 257

Query: 191 LLQV 194
           + Q+
Sbjct: 258 VHQI 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 62.3 bits (151), Expect = 2e-11
 Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL D G+    ++      S +GTPY+M+PE      + GYN + DIW++G    E+
Sbjct: 143 GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI---HENGYNFKSDIWSLGCLLYEM 199

Query: 132 AELQPPMF-DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
           A LQ P + D   + +L    +    PP     D +S      V + +  +P+KRP
Sbjct: 200 AALQSPFYGDKMNLYSLCKKIEQCDYPPL--PSDHYSEELRQLVNMCINPDPEKRP 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 62.0 bits (150), Expect = 4e-11
 Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)

Query: 8   FLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK 66
           F     V ++  Y+ + DIW++GITAIELA+ +PP  DLHPMR LFL+ K+   PP L+
Sbjct: 166 FWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN--SPPTLE 222

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 61.6 bits (149), Expect = 6e-11
 Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 14/90 (15%)

Query: 8   FLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD 67
           F     V ++  Y+ + DIW++GITAIELA+ +PP  D+HPMR LFL+ K    PP L  
Sbjct: 166 FWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK--NNPPTL-- 221

Query: 68  KDRCGDVKLADFGVSAQ--ITATINKRKSF 95
                     +F    +  I A +NK  SF
Sbjct: 222 --------TGEFSKPFKEFIDACLNKDPSF 243

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 61.1 bits (148), Expect = 7e-11
 Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 7/124 (5%)

Query: 70  RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAI 129
           R   +K+ D G++  +    +   + IGTPY+M+PE+ +      YN + D+WA+G    
Sbjct: 137 RTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFS---NKPYNYKSDVWALGCCVY 193

Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           E+A L+   F+   M +L      G  PP  KD   +S      +   L+K P+KRP+  
Sbjct: 194 EMATLKHA-FNAKDMNSLVYRIIEGKLPPMPKD---YSPELGELIATMLSKRPEKRPSVK 249

Query: 190 KLLQ 193
            +L+
Sbjct: 250 SILR 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 60.5 bits (147), Expect = 1e-10
 Identities = 23/46 (50%), Positives = 34/46 (73%), Gaps = 2/46 (4%)

Query: 20  YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL 65
           Y+ + DIW++GIT IELA+++PP  +L+PMR L  + KS  +PP L
Sbjct: 185 YDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS--EPPTL 228

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 60.8 bits (147), Expect = 1e-10
 Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 4/59 (6%)

Query: 10  QVAAVERK--GGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK 66
           +V A E++    Y+ +CD+W++GITAIEL +  PP+ DLHPMRALF + ++   PP L 
Sbjct: 194 EVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN--PPPTLH 250

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 61.6 bits (149), Expect = 1e-10
 Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 15/127 (11%)

Query: 72  GDVKLADFGVSAQIT--ATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAI 129
           G +KL DFG S Q +   +++   SF GTPY++APE+   ERK  Y+++ D+W++G+   
Sbjct: 206 GIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELW--ERK-RYSKKADMWSLGVILY 262

Query: 130 ELAELQPPM---FDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
           EL  L  P         M+ +       F  P        SS     +   L+KNP  RP
Sbjct: 263 ELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPV-------SSGMKALLDPLLSKNPALRP 315

Query: 187 TADKLLQ 193
           T  +LL 
Sbjct: 316 TTQQLLH 322

Length = 478

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 60.4 bits (146), Expect = 2e-10
 Identities = 25/63 (39%), Positives = 43/63 (68%), Gaps = 4/63 (6%)

Query: 10  QVAAVERK--GGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD 67
           +V A E++    Y+ +CD+W++GITAIEL +  PP+FD+HP++ LF + ++   PP L  
Sbjct: 198 EVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRN--PPPTLLH 255

Query: 68  KDR 70
            ++
Sbjct: 256 PEK 258

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 59.9 bits (145), Expect = 2e-10
 Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 7/124 (5%)

Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +K+ DFGVS  +  + +   +F GTPY+M+PE  A++ + GY+ + DIW++G    E+  
Sbjct: 144 LKIGDFGVSRLLMGSCDLATTFTGTPYYMSPE--ALKHQ-GYDSKSDIWSLGCILYEMCC 200

Query: 134 LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           L    F+     ++ L    G   P+L   + +S   ++ ++  L K+P  RP+A ++L+
Sbjct: 201 LAHA-FEGQNFLSVVLRIVEG-PTPSL--PETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256

Query: 194 VILI 197
              I
Sbjct: 257 NPFI 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 59.4 bits (144), Expect = 3e-10
 Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 8/75 (10%)

Query: 69  DRCGDVKLADFGVSAQITATINKR---KSFIGTPYWMAPEVAAV---ERKGGYNQQCDIW 122
           DR G +KLADFG +A++TA  NK    K  +GTP ++APEV      + KG Y  +CD W
Sbjct: 136 DRTGHIKLADFGSAARLTA--NKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWW 193

Query: 123 AVGITAIELAELQPP 137
           ++G+ A E+   + P
Sbjct: 194 SLGVIAYEMIYGRSP 208

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 58.9 bits (142), Expect = 4e-10
 Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 2/59 (3%)

Query: 8   FLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK 66
           F     V ++  Y+ + DIW++GITAIELA+ +PP  +LHPM+ LFL+ K+   PP L+
Sbjct: 166 FWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN--NPPTLE 222

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 59.4 bits (144), Expect = 5e-10
 Identities = 47/192 (24%), Positives = 76/192 (39%), Gaps = 35/192 (18%)

Query: 94  SFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS 153
           S +GTP ++APEV     + GY Q CD W+VG+   E+   QPP     P          
Sbjct: 203 SLVGTPNYIAPEVLL---RTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAET------- 252

Query: 154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQ 213
                 LK  + W +T H   +  L+     R  +D +L++           E + G N 
Sbjct: 253 -----QLKVIN-WETTLHIPSQAKLS-----REASDLILRLC-------CGAEDRLGKNG 294

Query: 214 QCDIWAHPFFK----YDMSKRVAIELLQKVSNPPTT--YTDLEPDDDGEIPNVPQRIQSR 267
             +I AHPFFK      + +R     + K+++P  T  +  ++P+      +       R
Sbjct: 295 ADEIKAHPFFKGIDFASLIRRQKAPYIPKITHPTDTSNFDPVDPEKLRSDDSGESS-PDR 353

Query: 268 LLTARNNHARNP 279
            +   N      
Sbjct: 354 NVKPNNRKRTEH 365

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 58.7 bits (142), Expect = 7e-10
 Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 15/148 (10%)

Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE-RKGGYNQQC-DIWAVGITAIEL 131
           VK+ADFGVS  +  T++   S +GT  +M+PE    +   G Y+    DIW++G++ +E 
Sbjct: 207 VKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEF 266

Query: 132 AELQPPMF-----DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
              + P       D   +     MS+    P         S  F +F+   L + P KR 
Sbjct: 267 YLGRFPFGVGRQGDWASLMCAICMSQPPEAPATA------SREFRHFISCCLQREPAKRW 320

Query: 187 TADKLLQVILIHRARVAAVERKGGYNQQ 214
           +A +LLQ   I   R    + +GG N  
Sbjct: 321 SAMQLLQHPFI--LRAQPGQGQGGPNLH 346

Length = 353

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 58.2 bits (140), Expect = 8e-10
 Identities = 26/49 (53%), Positives = 37/49 (75%), Gaps = 2/49 (4%)

Query: 20  YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDK 68
           Y+ + D+W++GITAIE+AE  PP+ D+HPMRALFL+ ++    P LK K
Sbjct: 193 YDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN--PAPRLKSK 239

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 58.3 bits (142), Expect = 8e-10
 Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 40/160 (25%)

Query: 69  DRCGDVKLADFGVSAQI---TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG 125
           D  G +K+ DFG + ++   T T+       GTP ++APE+  +  KG Y +  D WA+G
Sbjct: 135 DSDGYIKITDFGFAKRVKGRTYTL------CGTPEYLAPEI--ILSKG-YGKAVDWWALG 185

Query: 126 ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
           I   E+    PP FD +P++   +  K       L+ K R+ S F    K  +       
Sbjct: 186 ILIYEMLAGYPPFFDDNPIQ---IYEK------ILEGKVRFPSFFSPDAKDLIR------ 230

Query: 186 PTADKLLQVILIHRARVAAVERKG-GYNQQCDIWAHPFFK 224
                LLQV L         +R G   N   DI  HP+F 
Sbjct: 231 ----NLLQVDL--------TKRLGNLKNGVNDIKNHPWFA 258

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 56.9 bits (137), Expect = 2e-09
 Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 7/119 (5%)

Query: 75  KLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAEL 134
           KL DFG++ Q+  ++    + +GTPY+++PE+    +   YN + DIW++G    EL  L
Sbjct: 142 KLGDFGIARQLNDSMELAYTCVGTPYYLSPEIC---QNRPYNNKTDIWSLGCVLYELCTL 198

Query: 135 QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           + P F+ + +  L L    G+  P       +S    + +      +P+ RP+   +L+
Sbjct: 199 KHP-FEGNNLHQLVLKICQGYFAPI---SPNFSRDLRSLISQLFKVSPRDRPSITSILK 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 30/162 (18%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRK-SFIGTPYWMAPEVAAVERK-GGYNQQCDIW 122
           L D +  G V L DFG+S +  A   +R  SF GT  +MAPEV  +    GG+++  D W
Sbjct: 137 LLDSE--GHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEV--IRGGSGGHDKAVDWW 192

Query: 123 AVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNP 182
           ++G+   EL                     +G  P  +  +    S      +  L   P
Sbjct: 193 SLGVLTFELL--------------------TGASPFTVDGEQNSQS---EISRRILKSKP 229

Query: 183 KKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
               T     +   I +      +++ G N   +I  HPFF+
Sbjct: 230 PFPKTMSAEAR-DFIQKLLEKDPKKRLGANGADEIKNHPFFQ 270

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 57.1 bits (138), Expect = 2e-09
 Identities = 45/159 (28%), Positives = 65/159 (40%), Gaps = 33/159 (20%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +K+ADFG+  +        ++F GTP ++APE+ A +    Y +  D WA G+  
Sbjct: 135 DAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQP---YGKSVDWWAFGVLL 191

Query: 129 IELAELQPPMFDLHPMRALF--LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
            E+   QPP FD      LF  +M  +   P +L      S    +  K  LTK+P KR 
Sbjct: 192 YEMLAGQPP-FDGEDEDELFQSIMEHNVSYPKSL------SKEAVSICKGLLTKHPAKR- 243

Query: 187 TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKY 225
                                  G   + DI  H FF+ 
Sbjct: 244 --------------------LGCGPTGERDIREHAFFRR 262

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 57/212 (26%), Positives = 83/212 (39%), Gaps = 50/212 (23%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +K+ADFG+  +         +F GTP ++APE+ + +    Y    D WA+G+  
Sbjct: 130 DSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQP---YGPAVDWWALGVLL 186

Query: 129 IELAELQPPMFDLHPMRALF--LMSKSGFKPPALKDKDRWSST-FHNFVKIALTKNPKKR 185
            E+   Q P F+      LF  ++      P       RW S    + +K  LTKNP+KR
Sbjct: 187 YEMLAGQSP-FEGDDEDELFQSILEDEVRYP-------RWLSKEAKSILKSFLTKNPEKR 238

Query: 186 PTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKY---DMSKRVAIELLQK---- 238
                                       + DI  HPFF+    D  +R  I+   K    
Sbjct: 239 LGC---------------------LPTGEQDIKGHPFFREIDWDKLERKEIKPPFKPKIK 277

Query: 239 ----VSNPPTTYT----DLEPDDDGEIPNVPQ 262
               VSN    +T     L P D+  I N+ Q
Sbjct: 278 GRFDVSNFDDEFTKEKPVLTPPDEAIIRNIDQ 309

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 55.4 bits (133), Expect = 8e-09
 Identities = 52/183 (28%), Positives = 76/183 (41%), Gaps = 52/183 (28%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG--YNQQCDIWAVGITAI 129
           G++KL DFGVS Q+  ++    SF+GT  +M+PE     R  G  Y+ Q DIW++G++ +
Sbjct: 141 GEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPE-----RLQGTHYSVQSDIWSMGLSLV 193

Query: 130 ELA------------ELQ-----------------------PP-------MFDLHPMRAL 147
           ELA            EL+                       PP         D  P  A+
Sbjct: 194 ELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAI 253

Query: 148 F-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVE 206
           F L+     +PP       ++  F  FV   L KNP +R     L+    I R+ V  V+
Sbjct: 254 FELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSEVEEVD 313

Query: 207 RKG 209
             G
Sbjct: 314 FAG 316

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 55.2 bits (133), Expect = 1e-08
 Identities = 54/206 (26%), Positives = 78/206 (37%), Gaps = 52/206 (25%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKS-FIGTPYWMAPEVAAVERKGG-YNQQCDIWAVGI 126
           D+ G +KLADFG   ++ A    R    +GTP +++PEV   +   G Y ++CD W+VG+
Sbjct: 176 DKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 235

Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
              E+     P +                        D    T+    KI   KN    P
Sbjct: 236 FLYEMLVGDTPFYA-----------------------DSLVGTYS---KIMDHKNSLTFP 269

Query: 187 T-------ADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM---------SKR 230
                   A  L+   L  R      E + G N   +I +HPFFK D             
Sbjct: 270 DDIEISKQAKDLICAFLTDR------EVRLGRNGVDEIKSHPFFKNDQWTFDNIRETVAP 323

Query: 231 VAIELLQKVSNPPTTYTDLEPDDDGE 256
           V  EL   +    + + D+E DD  E
Sbjct: 324 VVPELSSDIDT--SNFDDIEDDDKNE 347

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 42/156 (26%), Positives = 62/156 (39%), Gaps = 31/156 (19%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +KL DFG+S       NK+  F+GTP ++APE   +   G  ++  D W++G   
Sbjct: 131 DQTGHLKLTDFGLSR--NGLENKK--FVGTPDYLAPET--ILGVGD-DKMSDWWSLGCVI 183

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E     PP F      A+F           L  +  W       VK   +         
Sbjct: 184 FEFLFGYPP-FHAETPDAVF--------DNILSRRINW----PEEVKEFCSPEAVD---- 226

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
                  LI+R       ++ G N   +I +HPFFK
Sbjct: 227 -------LINRLLCMDPAKRLGANGYQEIKSHPFFK 255

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 54.5 bits (132), Expect = 1e-08
 Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 36/149 (24%)

Query: 74  VKLADFGVSAQITATINKRKSF---IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIE 130
           VK+ADFG++ +I      R  +   + T ++ APE+  + R   Y+   DIWA+G    E
Sbjct: 138 VKIADFGLAREI----RSRPPYTDYVSTRWYRAPEI--LLRSTSYSSPVDIWALGCIMAE 191

Query: 131 LAELQPPMF-------DLHPM-------------RALFLMSKSGFKPPALKDKD------ 164
           L  L+ P+F        L+ +                 L SK GF+ P            
Sbjct: 192 LYTLR-PLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIP 250

Query: 165 RWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
             S    + +K  L  +PKKRPTA + LQ
Sbjct: 251 NASPEAIDLIKDMLRWDPKKRPTASQALQ 279

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 55.0 bits (132), Expect = 1e-08
 Identities = 58/194 (29%), Positives = 83/194 (42%), Gaps = 34/194 (17%)

Query: 70  RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAI 129
           RCGD +L      A          S +GTP ++APEV  + RKG Y Q CD W+VG+   
Sbjct: 184 RCGD-RLKTLEQRATKQHQRCLAHSLVGTPNYIAPEV--LLRKG-YTQLCDWWSVGVILF 239

Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           E+   QPP     P      +               W +T H   ++ L+      P A 
Sbjct: 240 EMLVGQPPFLAPTPTETQLKVIN-------------WENTLHIPPQVKLS------PEA- 279

Query: 190 KLLQVILIHRARVAAVERKGGYNQQCDIWAHPFF-KYDMS---KRVAIELLQKVSNPPTT 245
               V LI +   +A ER G  N   DI AHPFF + D S   +      + K+S+P  T
Sbjct: 280 ----VDLITKLCCSAEERLGR-NGADDIKAHPFFSEVDFSSDIRTQPAPYVPKISHPMDT 334

Query: 246 YTDLEPDDDGEIPN 259
            ++ +P ++    N
Sbjct: 335 -SNFDPVEEESPWN 347

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 6/50 (12%)

Query: 24  CDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKP------PALKD 67
            DIW++G T IEL    PP +DL+PM ALF + +    P      P LKD
Sbjct: 180 SDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKD 229

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 6/57 (10%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG 125
           D  G +KL DFG+S      +    S +G+P +MAPEV    R  GY+   D W++G
Sbjct: 135 DASGHIKLTDFGLSK---GIVTYANSVVGSPDYMAPEVL---RGKGYDFTVDYWSLG 185

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 53.7 bits (130), Expect = 2e-08
 Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 10/125 (8%)

Query: 74  VKLADFGVSAQITATINKRKSFIG-TPY-WMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK++DFG+S  I      RK   G  P  WMAPE     + G +  + D+W+ G+   E+
Sbjct: 141 VKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESL---KDGKFTSKSDVWSFGVLLWEI 197

Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
             L + P   +     L L+ + G++ P  ++        +  +      +P+ RPT  +
Sbjct: 198 FTLGEQPYPGMSNEEVLELL-EDGYRLPRPEN---CPDELYELMLQCWAYDPEDRPTFSE 253

Query: 191 LLQVI 195
           L++ +
Sbjct: 254 LVEDL 258

Length = 258

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 54.1 bits (130), Expect = 2e-08
 Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 13/118 (11%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G VK+ DFG + ++    ++  +  GTP ++APEV  ++ KG + +  D W +G+  
Sbjct: 152 DNKGHVKVTDFGFAKKVP---DRTFTLCGTPEYLAPEV--IQSKG-HGKAVDWWTMGVLL 205

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRW-SSTFHNFVKIALTKNPKKR 185
            E     PP FD  P R    +     K P       W      + VK  L  +  KR
Sbjct: 206 YEFIAGYPPFFDDTPFRIYEKILAGRLKFP------NWFDGRARDLVKGLLQTDHTKR 257

Length = 329

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 53.5 bits (129), Expect = 2e-08
 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 18/123 (14%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G V + DF ++ ++T       S  GTP +MAPEV     + GY+   D W++G+TA
Sbjct: 134 DEQGHVHITDFNIATKVTPDTLT-TSTSGTPGYMAPEVL---CRQGYSVAVDWWSLGVTA 189

Query: 129 IELAELQPPMFDLHP------MRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNP 182
            E    + P +  H       +RA    +   + P        WS+   + +   L ++P
Sbjct: 190 YECLRGKRP-YRGHSRTIRDQIRAKQETADVLY-PAT------WSTEAIDAINKLLERDP 241

Query: 183 KKR 185
           +KR
Sbjct: 242 QKR 244

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 53.5 bits (128), Expect = 3e-08
 Identities = 22/46 (47%), Positives = 35/46 (76%), Gaps = 2/46 (4%)

Query: 20  YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL 65
           Y+ + DIW++GIT IE+A+++PP  +L+PMR L  ++KS  +PP L
Sbjct: 192 YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--EPPTL 235

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 53.4 bits (128), Expect = 3e-08
 Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 10/119 (8%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G + L DFG+S           +F GT  ++APEV   E+  GY +  D W++G+  
Sbjct: 130 DATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEK--GYTKHVDFWSLGVLV 187

Query: 129 IELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+     P +  D   M       K  F    L D+ R       FVK  L +NP+ R
Sbjct: 188 FEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGR------QFVKGLLNRNPQHR 240

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 52.7 bits (127), Expect = 4e-08
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 14  VERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL---KDKDR 70
           +E+  GY+ + DIW+ GITAIELA    P     PM+ L L  ++   PP+L    D  +
Sbjct: 178 MEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN--DPPSLETGADYKK 235

Query: 71  CG 72
             
Sbjct: 236 YS 237

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 53.1 bits (127), Expect = 4e-08
 Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 2/51 (3%)

Query: 20  YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR 70
           Y+ + D+W++GIT IE+A+++PP  +L+PMR L  ++KS  +PP L    R
Sbjct: 185 YDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--EPPTLAQPSR 233

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 53.3 bits (128), Expect = 4e-08
 Identities = 21/53 (39%), Positives = 37/53 (69%), Gaps = 2/53 (3%)

Query: 17  KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD 69
           +G Y+ + D+W++GIT IELAE +PP+F+++ M AL+ ++++    P L   D
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DSPTLSSND 238

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 53.1 bits (127), Expect = 4e-08
 Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 50/181 (27%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG--YNQQCDIWAVGITAI 129
           G++KL DFGVS Q+  ++    SF+GT  +M+PE     R  G  Y+ Q DIW++G++ +
Sbjct: 141 GEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPE-----RLQGTHYSVQSDIWSMGLSLV 193

Query: 130 ELA----ELQPP-------MF-----------------------------DLHPMRALF- 148
           E+A     + PP       MF                             D  P  A+F 
Sbjct: 194 EMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFE 253

Query: 149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERK 208
           L+     +PP       + + F +FV   L KNP +R    +L+    I R+    V+  
Sbjct: 254 LLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSEAEEVDFA 313

Query: 209 G 209
           G
Sbjct: 314 G 314

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 52.4 bits (126), Expect = 6e-08
 Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 2/48 (4%)

Query: 20  YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD 67
           Y+ + DIW++GIT  E+A   PP  D+   RA+ L+ KS  KPP L+D
Sbjct: 179 YDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS--KPPRLED 224

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 53.1 bits (128), Expect = 6e-08
 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 32/101 (31%)

Query: 69  DRCGDVKLADFGVSAQI------------------TATINKR-----------KSFIGTP 99
           D  G +KLADFG+  ++                     +  R            S +GTP
Sbjct: 135 DADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTP 194

Query: 100 YWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFD 140
            ++APEV    R   Y  +CD W++G+   E+    PP + 
Sbjct: 195 DYIAPEVL---RGTPYGLECDWWSLGVILYEMLYGFPPFYS 232

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 51.7 bits (124), Expect = 2e-07
 Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 3/74 (4%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSF-IGTPYWMAPEV--AAVERKGGYNQQCDIWAVG 125
           D+ G ++LADFG   ++ A    + +  +GTP +++PE+  A  + KG Y  +CD W++G
Sbjct: 136 DKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLG 195

Query: 126 ITAIELAELQPPMF 139
           +   E+   + P +
Sbjct: 196 VCMYEMLYGETPFY 209

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 51.5 bits (123), Expect = 2e-07
 Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 38/177 (21%)

Query: 94  SFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS 153
           S +GTP ++APEV     + GY Q CD W+VG+   E+   QPP     P+     +   
Sbjct: 207 SLVGTPNYIAPEVLL---RTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVI-- 261

Query: 154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQ 213
                       W ++ H      +    K  P A  L  +I + R      E + G N 
Sbjct: 262 -----------NWQTSLH------IPPQAKLSPEASDL--IIKLCRGP----EDRLGKNG 298

Query: 214 QCDIWAHPFFK-YDMSKRV---AIELLQKVSNPPTT--YTDLEPD----DDGEIPNV 260
             +I AHPFFK  D S  +   +   + K+++P  T  +  ++PD    DD +  NV
Sbjct: 299 ADEIKAHPFFKTIDFSSDLRQQSAPYIPKITHPTDTSNFDPVDPDKLWSDDDKEGNV 355

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 50.5 bits (120), Expect = 3e-07
 Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 3/68 (4%)

Query: 7   HFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK 66
           +++    V RK  Y  + DIW++GI AIE+ E +PP  + +P+RAL+L++ +G   P L+
Sbjct: 180 YWMAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG--TPELQ 236

Query: 67  DKDRCGDV 74
           + +R   V
Sbjct: 237 NPERLSAV 244

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 6/75 (8%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +KL DFG + ++    ++  +  GTP ++APEV  ++ KG +N+  D WA+GI  
Sbjct: 135 DKEGHIKLTDFGFAKKL---RDRTWTLCGTPEYLAPEV--IQSKG-HNKAVDWWALGILI 188

Query: 129 IELAELQPPMFDLHP 143
            E+    PP FD +P
Sbjct: 189 YEMLVGYPPFFDDNP 203

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 50.3 bits (120), Expect = 4e-07
 Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 5/81 (6%)

Query: 14  VERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGD 73
           V RK  Y  + DIW++GI AIE+ E +PP  + +P+RAL+L++ +G   P L++ ++   
Sbjct: 187 VTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG--TPELQNPEKLSA 243

Query: 74  VKLADFGVSAQITATINKRKS 94
           +   DF ++  +   + KR S
Sbjct: 244 I-FRDF-LNRCLEMDVEKRGS 262

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 50.1 bits (120), Expect = 4e-07
 Identities = 18/50 (36%), Positives = 30/50 (60%)

Query: 14  VERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP 63
           + ++GGY    DIW++G T +E+A  +PP   L  + A+F + +S   PP
Sbjct: 173 IAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPP 222

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 39/159 (24%), Positives = 60/159 (37%), Gaps = 42/159 (26%)

Query: 69  DRCGDVKLADFGVSAQITATINKR-KSFIGTPYWMAPE--VAAVERKGGYNQQCDIWAVG 125
              G +KL DFG +  + A        ++ T ++ APE  V        Y +  D+WA+G
Sbjct: 134 SESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTN----YGKPVDVWAIG 189

Query: 126 ITAIELAELQPPMFDLHP-----------MRALFLMSKS------------GFKPPALKD 162
               EL + +P    L P            + L  +  S            G   P    
Sbjct: 190 CIMAELLDGEP----LFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQ 245

Query: 163 KD--------RWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
            +        + SS   +F+K  L  +PK+R T D+LLQ
Sbjct: 246 PESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 48.9 bits (116), Expect = 1e-06
 Identities = 20/53 (37%), Positives = 39/53 (73%), Gaps = 2/53 (3%)

Query: 17  KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD 69
           +G Y+ + D+W++GIT IELAE +PP+F+++ M AL+ ++++  + P L+  +
Sbjct: 198 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--ESPTLQSNE 248

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 48.9 bits (116), Expect = 1e-06
 Identities = 18/42 (42%), Positives = 34/42 (80%)

Query: 17  KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS 58
           +G Y+ + D+W++GIT IELAE +PP+F+++ M AL+ ++++
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 229

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 48.9 bits (116), Expect = 1e-06
 Identities = 18/42 (42%), Positives = 34/42 (80%)

Query: 17  KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS 58
           +G Y+ + D+W++GIT IELAE +PP+F+++ M AL+ ++++
Sbjct: 194 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 235

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 49.0 bits (116), Expect = 1e-06
 Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 3/64 (4%)

Query: 7   HFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK 66
           +++    V RK  Y  + DIW++GI AIE+ E +PP  + +P+RAL+L++ +G   P L+
Sbjct: 180 YWMAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG--TPELQ 236

Query: 67  DKDR 70
           + ++
Sbjct: 237 NPEK 240

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 48.6 bits (115), Expect = 1e-06
 Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 3/64 (4%)

Query: 7   HFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK 66
           +++    V RK  Y  + DIW++GI AIE+ E +PP  + +P+RAL+L++ +G   P L+
Sbjct: 181 YWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG--TPELQ 237

Query: 67  DKDR 70
           + ++
Sbjct: 238 NPEK 241

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 49.0 bits (117), Expect = 1e-06
 Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 35/161 (21%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           + DKD  G +K+ DFG+  +  +     K+F GTP ++APEV        Y +  D W +
Sbjct: 127 MLDKD--GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL---EDNDYGRAVDWWGL 181

Query: 125 GITAIELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNP 182
           G+   E+   + P +  D   +  L LM +  F P  L  + +      + +   L K+P
Sbjct: 182 GVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF-PRTLSPEAK------SLLAGLLKKDP 234

Query: 183 KKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFF 223
           K+R                       GG     +I  H FF
Sbjct: 235 KQR---------------------LGGGPEDAKEIMEHRFF 254

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 49.0 bits (117), Expect = 1e-06
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ADFG+  +      K  +F GTP ++APE+   ++   YN+  D W+ G+  
Sbjct: 130 DKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQK---YNESVDWWSFGVLL 186

Query: 129 IELAELQPP 137
            E+   Q P
Sbjct: 187 YEMLIGQSP 195

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 10/122 (8%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L + D+   V + DFG++ Q     +K  S +GT  +  PE+   E    Y ++ D+WA 
Sbjct: 147 LGEDDK---VTITDFGLAKQKQPE-SKLTSVVGTILYSCPEIVKNEP---YGEKADVWAF 199

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G    ++  LQPP +  + +     + ++ ++P  L +   +S    + +   LT + + 
Sbjct: 200 GCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP--LPE-GMYSEDVTDVITSCLTPDAEA 256

Query: 185 RP 186
           RP
Sbjct: 257 RP 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 3/63 (4%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +KL DFG+S +      K  SF GT  +MAPEV  V R+ G+ Q  D W+ G+  
Sbjct: 132 DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV--VNRR-GHTQSADWWSFGVLM 188

Query: 129 IEL 131
            E+
Sbjct: 189 FEM 191

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 49.4 bits (117), Expect = 2e-06
 Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 8/123 (6%)

Query: 75  KLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAEL 134
           K+ DFG+S  I    +   S +GTPY+ +PE+   E K  Y+ + D+WA+G    EL   
Sbjct: 182 KIGDFGLSKNIGIE-SMAHSCVGTPYYWSPELLLHETK-SYDDKSDMWALGCIIYELCSG 239

Query: 135 QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLL-- 192
           + P    +    L    K G   P L  K + S   +  +K  L  + K+RP+A + L  
Sbjct: 240 KTPFHKANNFSQLISELKRG---PDLPIKGK-SKELNILIKNLLNLSAKERPSALQCLGY 295

Query: 193 QVI 195
           Q+I
Sbjct: 296 QII 298

Length = 1021

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 35/194 (18%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSF-IGTPYWMAPEV--AAVERKGGYNQQCDIWAVG 125
           D  G ++LADFG   ++      + S  +GTP +++PE+  A  + KG Y  +CD W++G
Sbjct: 136 DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLG 195

Query: 126 ITAIELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPK 183
           +   E+   + P +   L       +  K  F+ PA                  ++++ K
Sbjct: 196 VCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTD--------------VSEDAK 241

Query: 184 KRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK---YDMSKRVAIELLQKVS 240
                       LI R  + + E + G N   D   HPFF    +D  +      + +VS
Sbjct: 242 D-----------LIRRL-ICSREHRLGQNGIEDFKQHPFFTGIDWDNIRNCEAPYIPEVS 289

Query: 241 NPPTTYTDLEPDDD 254
           +P  T ++ + DDD
Sbjct: 290 SPTDT-SNFDVDDD 302

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 12/119 (10%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +K+ADFG+  +        ++F GTP ++APE+ A +    Y +  D WA G+  
Sbjct: 135 DSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQP---YGKSVDWWAYGVLL 191

Query: 129 IELAELQPPMFDLHPMRALF--LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   QPP FD      LF  +M  +   P +L      S    +  K  +TK+P KR
Sbjct: 192 YEMLAGQPP-FDGEDEDELFQSIMEHNVSYPKSL------SKEAVSICKGLMTKHPSKR 243

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 47.9 bits (114), Expect = 2e-06
 Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 27/157 (17%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G+V+++D G++ ++    +K K + GTP +MAPE+   E    Y+   D +A+G+T 
Sbjct: 131 DNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEE---YDFSVDYFALGVTL 187

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E+   + P F     +      K      ++   D++S    +F +  L K+P+K    
Sbjct: 188 YEMIAARGP-FRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEK---- 242

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCD-IWAHPFFK 224
                             R G  +  CD +  HP F+
Sbjct: 243 ------------------RLGFRDGNCDGLRTHPLFR 261

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 47.9 bits (114), Expect = 2e-06
 Identities = 46/158 (29%), Positives = 66/158 (41%), Gaps = 31/158 (19%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G  KLADFG+  +         +F GTP ++APE+    ++  Y    D WA+G+  
Sbjct: 130 DAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEIL---QELEYGPSVDWWALGVLM 186

Query: 129 IELAELQPPMFDLHPMRALF--LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
            E+   QPP F+      LF  ++      P  L      S    + +K  +TKNP K  
Sbjct: 187 YEMMAGQPP-FEADNEDDLFESILHDDVLYPVWL------SKEAVSILKAFMTKNPNK-- 237

Query: 187 TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
                         R+  V  +GG +    I  HPFFK
Sbjct: 238 --------------RLGCVASQGGEDA---IKQHPFFK 258

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 47.6 bits (113), Expect = 3e-06
 Identities = 44/176 (25%), Positives = 69/176 (39%), Gaps = 37/176 (21%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G + L DFG+        +K  +F GTP ++APE+       GY +  D W +G+  
Sbjct: 127 DYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGH---GYTKAVDWWTLGVLL 183

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E+    PP +D +       M +   + P L+  D +     + +   L+++P +R   
Sbjct: 184 YEMLTGLPPFYDENVNE----MYRKILQEP-LRFPDGFDRDAKDLLIGLLSRDPTRRL-- 236

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFF-KYDMSKRVAIELLQKVSNPP 243
                                GYN   +I  HPFF +    K     LL K   PP
Sbjct: 237 ---------------------GYNGAQEIKNHPFFSQLSWKK-----LLMKGIQPP 266

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 48.0 bits (114), Expect = 3e-06
 Identities = 46/184 (25%), Positives = 65/184 (35%), Gaps = 72/184 (39%)

Query: 101 WMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKP--- 157
           W++PEV   +   GY+ + DI++VGITA ELA    P  D+ P   + L   +G  P   
Sbjct: 174 WLSPEVLQ-QNLQGYDAKSDIYSVGITACELANGHVPFKDM-PATQMLLEKLNGTVPCLL 231

Query: 158 --------------------------------------PALKDKDR-WSSTFHNFVKIAL 178
                                                  +    +R +S  FH+FV+  L
Sbjct: 232 DTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCL 291

Query: 179 TKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQK 238
            +NP  RP+A  LL                           H FFK    KR A E L +
Sbjct: 292 QRNPDARPSASTLLN--------------------------HSFFK--QIKRRASEALPE 323

Query: 239 VSNP 242
           +  P
Sbjct: 324 LLRP 327

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 47.7 bits (113), Expect = 3e-06
 Identities = 49/187 (26%), Positives = 70/187 (37%), Gaps = 38/187 (20%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G V L DFG+  +  A  +   +F GTP ++APEV    RK  Y+   D W +G   
Sbjct: 130 DSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVI---RKQPYDNTVDWWCLGAVL 186

Query: 129 IELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
            E+    PP +  D+  M                         + N +   L   P    
Sbjct: 187 YEMLYGLPPFYCRDVAEM-------------------------YDNILHKPLVLRPGASL 221

Query: 187 TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTY 246
           TA  +L+  L+ + R   +  K  + +   I  HPFF          +L QK   PP   
Sbjct: 222 TAWSILEE-LLEKDRQRRLGAKEDFLE---IQEHPFF----ESLSWTDLEQKKIPPPFNP 273

Query: 247 TDLEPDD 253
               PDD
Sbjct: 274 NVEGPDD 280

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 47.7 bits (113), Expect = 3e-06
 Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 49/137 (35%)

Query: 101 WMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM---------- 150
           W++PE+   +  G YN + DI++VGITA ELA  + P  D+   + L             
Sbjct: 174 WLSPELLRQDLYG-YNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLD 232

Query: 151 -------------SKSG----------------------FKPPALKDKDRWSSTFHNFVK 175
                        S+SG                       + P+ K    +S  F N V+
Sbjct: 233 ITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKT---FSPAFQNLVE 289

Query: 176 IALTKNPKKRPTADKLL 192
           + L ++P+KRP+A  LL
Sbjct: 290 LCLQQDPEKRPSASSLL 306

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 30/151 (19%)

Query: 70  RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAI 129
           + G VKL DFG +  + A       ++ T ++ APE+   + K  Y +  DIWAVG    
Sbjct: 135 QSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTK--YGRAVDIWAVGCLVT 192

Query: 130 ELAELQPPMF----DL----HPMRAL--------FLMSKS----GFKPPALKDKD----- 164
           E+   + P+F    D+    H ++ L         +  K+    G + P +K+ +     
Sbjct: 193 EMLTGE-PLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKR 251

Query: 165 --RWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
             + S    +  K  L  +P  RP++ +LL 
Sbjct: 252 FPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 46.4 bits (111), Expect = 6e-06
 Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 9/122 (7%)

Query: 74  VKLADFGVSAQITATINKRKSFIGTPY-WMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           VK++DFG+S  +      RK     P  WMAPE     ++G +  + D+W+ G+   E+ 
Sbjct: 141 VKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESL---KEGKFTSKSDVWSFGVLLWEIF 197

Query: 133 EL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            L + P   +     L  + K+G++ P   +        ++ +     ++P+ RPT  +L
Sbjct: 198 TLGEQPYPGMSNEEVLEYL-KNGYRLPQPPNC---PPELYDLMLQCWAEDPEDRPTFSEL 253

Query: 192 LQ 193
           ++
Sbjct: 254 VE 255

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 46.7 bits (111), Expect = 6e-06
 Identities = 58/229 (25%), Positives = 89/229 (38%), Gaps = 74/229 (32%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +KL D+G+  +     +   +F GTP ++APE+    R   Y    D WA+G+  
Sbjct: 130 DAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEIL---RGEDYGFSVDWWALGVLM 186

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E+   + P FD+                                  + ++ NP +  T 
Sbjct: 187 FEMMAGRSP-FDI----------------------------------VGMSDNPDQN-TE 210

Query: 189 DKLLQVILIHRARV-------AAVERKGGYNQQ------C-------DIWAHPFFK---Y 225
           D L QVIL  + R+       A+   KG  N+       C       DI +HPFF+   +
Sbjct: 211 DYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDW 270

Query: 226 DM--SKRVA------IELLQKVSNPPTTYTD----LEPDDDGEIPNVPQ 262
           D+   K+V       IE  + + N    +TD    L PDD   I  + Q
Sbjct: 271 DLLEQKQVLPPYKPNIESDRDLDNFDPQFTDEPVQLTPDDPDVIARIDQ 319

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 46.6 bits (110), Expect = 6e-06
 Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 12/119 (10%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG+  +        K+F GTP ++APEV        Y +  D W +G+  
Sbjct: 129 DKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVL---EDNDYGRAVDWWGLGVVM 185

Query: 129 IELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P +  D   +  L LM    F P  L      S+   + +   L K+P KR
Sbjct: 186 YEMMCGRLPFYNQDHEKLFELILMEDIKF-PRTL------SADAKSLLSGLLIKDPNKR 237

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 46.4 bits (111), Expect = 6e-06
 Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 9/122 (7%)

Query: 74  VKLADFGVSAQITATINKRKSFIGTPY-WMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           VK++DFG+S  +      +      P  WMAPE     ++G +  + D+W+ G+   E+ 
Sbjct: 142 VKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESL---KEGKFTSKSDVWSFGVLLWEIF 198

Query: 133 EL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            L + P   +     L  + K G++ P   +        +  +     ++P+ RPT  +L
Sbjct: 199 TLGEEPYPGMSNAEVLEYL-KKGYRLPKPPNC---PPELYKLMLQCWAEDPEDRPTFSEL 254

Query: 192 LQ 193
           ++
Sbjct: 255 VE 256

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 46.6 bits (110), Expect = 7e-06
 Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 53/211 (25%)

Query: 69  DRCGDVKLADFGVSAQITAT-INKRKSFIGTPYWMAPEVAAVERKGG---YNQQCDIWAV 124
           D+ G +KLADFG   ++  T + +  + +GTP +++PEV  ++ +GG   Y ++CD W+V
Sbjct: 176 DKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEV--LKSQGGDGYYGRECDWWSV 233

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G+   E+     P +                            S    + KI   KN   
Sbjct: 234 GVFLFEMLVGDTPFYA--------------------------DSLVGTYSKIMDHKNSLN 267

Query: 185 RPT-------ADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK-----YDMSKRVA 232
            P        A  L+   L  R      E + G N   +I  HPFFK     +D  +  A
Sbjct: 268 FPEDVEISKHAKNLICAFLTDR------EVRLGRNGVEEIKQHPFFKNDQWNWDNIRETA 321

Query: 233 IELLQKVSN--PPTTYTDLEPDDDGEIPNVP 261
             ++ ++S+    + + D+E DD G++   P
Sbjct: 322 APVVPELSSDIDSSNFDDIE-DDKGDVETFP 351

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 46.2 bits (109), Expect = 8e-06
 Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 31/192 (16%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSF-IGTPYWMAPEV--AAVERKGGYNQQCDIWAVG 125
           D  G ++LADFG   ++      + S  +GTP +++PE+  A  +  G Y  +CD W++G
Sbjct: 136 DMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLG 195

Query: 126 ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
           +   E+      ++   P  A  L+   G     +  ++R+    H      +T   +  
Sbjct: 196 VCMYEM------LYGETPFYAESLVETYG---KIMNHEERFQFPSH------ITDVSE-- 238

Query: 186 PTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK---YDMSKRVAIELLQKVSNP 242
             A  L+Q ++  R      ER+ G N   D   H FF+   ++  + +    +  VS+P
Sbjct: 239 -EAKDLIQRLICSR------ERRLGQNGIEDFKKHAFFEGIDWENIRNLEAPYIPDVSSP 291

Query: 243 PTTYTDLEPDDD 254
             T ++ + DDD
Sbjct: 292 SDT-SNFDVDDD 302

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 46.0 bits (110), Expect = 9e-06
 Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 12/124 (9%)

Query: 74  VKLADFGVSAQITATINKRKSFIG-TP-YWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK++DFG+S  +      RK   G  P  WMAPE     + G +  + D+W+ G+   E+
Sbjct: 144 VKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESL---KDGIFTSKSDVWSFGVLLWEI 200

Query: 132 AEL-QPPMFDLHPMRAL-FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
             L   P   L     L +L  + G++ P     +      +  +      +P+ RPT  
Sbjct: 201 FTLGATPYPGLSNEEVLEYL--RKGYRLPK---PEYCPDELYELMLSCWQLDPEDRPTFS 255

Query: 190 KLLQ 193
           +L++
Sbjct: 256 ELVE 259

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 45.8 bits (108), Expect = 1e-05
 Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 13/123 (10%)

Query: 69  DRCGDVKLADFGVSAQITATINKRK-SFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT 127
           D  G V L DFG+S +      +R  SF GT  +MAP++      GG+++  D W++G+ 
Sbjct: 139 DSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVR-GGDGGHDKAVDWWSMGVL 197

Query: 128 AIELAELQPPMF-----DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNP 182
             EL     P       +     +  ++     +PP  ++    S+   + ++  L K+P
Sbjct: 198 MYELLTGASPFTVDGEKNSQAEISRRILKS---EPPYPQEM---SALAKDIIQRLLMKDP 251

Query: 183 KKR 185
           KKR
Sbjct: 252 KKR 254

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 52/198 (26%), Positives = 79/198 (39%), Gaps = 42/198 (21%)

Query: 69  DRCGDVKLADFGVSAQITATINKRK-SFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT 127
           D  G V L DFG+S +  +   +R  SF GT  +MAPE+  +  KGG+ +  D W++GI 
Sbjct: 139 DSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEI--IRGKGGHGKAVDWWSLGIL 196

Query: 128 AIELAELQPPMFDLHPMRALFLMSKSGFKPPALK-DKDRWSSTFHNFVKIALTKNPKKRP 186
             EL                     +G  P  L+ +++  S      +K          P
Sbjct: 197 IFELL--------------------TGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGP 236

Query: 187 TADKLLQVILIH--RARVAAVERKGGYNQQCDIWAHPFFK----YDMSK-------RVAI 233
            A  LL  +L    + R+ A  +        +I  HPFFK      ++        R +I
Sbjct: 237 EAQDLLHKLLRKDPKKRLGAGPQGAS-----EIKEHPFFKGLDWEALALRKVNPPFRPSI 291

Query: 234 ELLQKVSNPPTTYTDLEP 251
                V N    +T+LEP
Sbjct: 292 RNELDVGNFAEEFTNLEP 309

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 45.4 bits (107), Expect = 2e-05
 Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 12/119 (10%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +K+ADFG+  +        K+F GTP ++APE+ A +    Y +  D WA G+  
Sbjct: 135 DSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQP---YGKSVDWWAFGVLL 191

Query: 129 IELAELQPPMFDLHPMRALF--LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   Q P F+      LF  +M  +   P ++      S       K  +TK+P KR
Sbjct: 192 YEMLAGQAP-FEGEDEDELFQSIMEHNVAYPKSM------SKEAVAICKGLMTKHPGKR 243

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 56/218 (25%), Positives = 85/218 (38%), Gaps = 57/218 (26%)

Query: 37  AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQIT--ATINKRKS 94
           AE+   + DLH  R ++       KP  +   D  G ++++D G++ +I    TI  R  
Sbjct: 109 AEITCGLEDLHRERIVY----RDLKPENILLDDY-GHIRISDLGLAVEIPEGETIRGR-- 161

Query: 95  FIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG 154
            +GT  +MAPEV   ER   Y    D W +G    E+ E + P          F   K  
Sbjct: 162 -VGTVGYMAPEVVKNER---YTFSPDWWGLGCLIYEMIEGKSP----------FRQRKEK 207

Query: 155 FKPP-----ALKDKDRWSSTFHNFVK----IALTKNPKKRPTADKLLQVILIHRARVAAV 205
            K         +D++ +S  F    +      LTK+P  R          L  R   A  
Sbjct: 208 VKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFR----------LGCRGEGAE- 256

Query: 206 ERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPP 243
                     ++ AHPFF+    KR+   +L+    PP
Sbjct: 257 ----------EVKAHPFFRTANFKRLEAGMLE----PP 280

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 44.5 bits (105), Expect = 3e-05
 Identities = 17/55 (30%), Positives = 29/55 (52%)

Query: 14  VERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDK 68
           V  + GY ++ DIW++G T  E+A  +PP+  +  + A+F +       P L D 
Sbjct: 179 VINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDS 233

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 44.6 bits (105), Expect = 3e-05
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)

Query: 69  DRCGDVKLADFGVSAQITATINKR-KSFIGTPYWMAPEVAAVERKGG---YNQQCDIWAV 124
           D+ G +KLADFG   ++      R  + +GTP +++PEV  ++ +GG   Y ++CD W+V
Sbjct: 176 DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV--LKSQGGDGYYGRECDWWSV 233

Query: 125 GITAIELAELQPPMF 139
           G+   E+     P +
Sbjct: 234 GVFLYEMLVGDTPFY 248

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 44.2 bits (104), Expect = 3e-05
 Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 9/119 (7%)

Query: 69  DRCGDVKLADFGVSAQIT--ATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           D  G ++++D G++ QI    T+  R   +GT  +MAPEV   E+   Y    D W +G 
Sbjct: 136 DDRGHIRISDLGLAVQIPEGETVRGR---VGTVGYMAPEVINNEK---YTFSPDWWGLGC 189

Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
              E+ + Q P F     R          K    +  +++S    +  ++ LTKNPK+R
Sbjct: 190 LIYEMIQGQSP-FRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKER 247

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 43.9 bits (103), Expect = 5e-05
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 12/119 (10%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG+  +        K+F GTP ++APEV        Y +  D W +G+  
Sbjct: 130 DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL---EDNDYGRAVDWWGLGVVM 186

Query: 129 IELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P +  D   +  L LM +  F P  L  + +      + +   L K+PK+R
Sbjct: 187 YEMMCGRLPFYNQDHEKLFELILMEEIRF-PRTLSPEAK------SLLSGLLKKDPKQR 238

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 43.5 bits (103), Expect = 6e-05
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 19  GYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDK 68
           GYN++ DI++VGITA ELA    P  D+       L+ K     P L DK
Sbjct: 186 GYNEKSDIYSVGITACELANGHVPFKDMPAT--QMLLEKVRGTVPCLLDK 233

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 43.0 bits (102), Expect = 8e-05
 Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 50/165 (30%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATIN---------------------KRKSFIGTPYWMA 103
           L DKD    +K+ DFG +A++    +                     +  SF+GT  +++
Sbjct: 134 LLDKD--MHIKITDFG-TAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVS 190

Query: 104 PEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK---------SG 154
           PE+   E+  G     D+WA+G    ++   +PP F            K           
Sbjct: 191 PELLN-EKPAGK--SSDLWALGCIIYQMLTGKPP-F--RGSNEYLTFQKILKLEYSFPPN 244

Query: 155 FKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHR 199
           F PP  KD           ++  L  +P+ R   ++    +  H 
Sbjct: 245 F-PPDAKD----------LIEKLLVLDPQDRLGVNEGYDELKAHP 278

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 43.1 bits (102), Expect = 8e-05
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G VK+ADFG+  +     ++  +F GTP ++APEV        Y +  D W +G+  
Sbjct: 135 DTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETS---YTRAVDWWGLGVLI 191

Query: 129 IELAELQPP 137
            E+   + P
Sbjct: 192 YEMLVGESP 200

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 43.0 bits (101), Expect = 9e-05
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           DR G +K+ADFG+  +     N+  +F GTP ++APE+    +   Y    D W+ G+  
Sbjct: 130 DRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLK---YTFSVDWWSFGVLL 186

Query: 129 IELAELQPP 137
            E+   Q P
Sbjct: 187 YEMLIGQSP 195

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 15/18 (83%), Positives = 17/18 (94%)

Query: 202 VAAVERKGGYNQQCDIWA 219
           VAAVERKGGY+ +CDIWA
Sbjct: 172 VAAVERKGGYDGKCDIWA 189

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 10/125 (8%)

Query: 74  VKLADFGVSAQITATINKRKSFIGT-PY-WMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G  P  WMAPE     + G +    D+W+ G+   E+
Sbjct: 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL---KDGVFTTSSDMWSFGVVLWEI 214

Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
             L + P   L   + L  +   G+    L   D       + +++    NPK RPT  +
Sbjct: 215 TSLAEQPYQGLSNEQVLKFVMDGGY----LDQPDNCPERVTDLMRMCWQFNPKMRPTFLE 270

Query: 191 LLQVI 195
           ++ ++
Sbjct: 271 IVNLL 275

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G+V+++D G++ ++     K K   GTP +MAPEV    +   Y+   D +A+G T 
Sbjct: 129 DDHGNVRISDLGLAVELKGG-KKIKGRAGTPGYMAPEVL---QGEVYDFSVDWFALGCTL 184

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P F     +      K      A++  D++S    +  +  L K+P+KR
Sbjct: 185 YEMIAGRSP-FRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKR 240

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L D D  G +K+ADFG+  +      K  +F GTP ++APE+   ++   YN   D W+ 
Sbjct: 128 LLDTD--GHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQK---YNTSVDWWSF 182

Query: 125 GITAIELAELQPPMFDLHPMRALF 148
           G+   E+   Q P F  H    LF
Sbjct: 183 GVLLYEMLIGQSP-FHGHDEEELF 205

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 57/229 (24%), Positives = 87/229 (37%), Gaps = 74/229 (32%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +KL D+G+  +     +   +F GTP ++APE+    R   Y    D WA+G+  
Sbjct: 130 DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL---RGEDYGFSVDWWALGVLM 186

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E+   + P FD+                                  +  + NP +  T 
Sbjct: 187 FEMMAGRSP-FDI----------------------------------VGSSDNPDQN-TE 210

Query: 189 DKLLQVILIHRARV--------AAV----------ERKGGYNQQ--CDIWAHPFFK---Y 225
           D L QVIL  + R+        A+V          ER G + Q    DI  HPFF+   +
Sbjct: 211 DYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW 270

Query: 226 DM--SKRVAIELLQKVS------NPPTTYTD----LEPDDDGEIPNVPQ 262
           D+   K+V       +S      N    +T+    L PDDD  +  + Q
Sbjct: 271 DLMEQKQVVPPFKPNISGEFGLDNFDAQFTNEPVQLTPDDDDIVRKIDQ 319

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 41.7 bits (99), Expect = 2e-04
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 16  RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF 53
              GY +  DIW++G+   EL   +PP      +  LF
Sbjct: 169 LGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELF 206

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 14/121 (11%)

Query: 67  DKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           DKD  G +K+ DFG+  +  +     K+F GTP ++APEV        Y +  D W +G+
Sbjct: 129 DKD--GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL---EDNDYGRAVDWWGLGV 183

Query: 127 TAIELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
              E+   + P +  D   +  L LM +  F P  L  + +      + +   L K+PK+
Sbjct: 184 VMYEMMCGRLPFYNQDHERLFELILMEEIRF-PRTLSPEAK------SLLAGLLKKDPKQ 236

Query: 185 R 185
           R
Sbjct: 237 R 237

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 13/121 (10%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G ++++D G++ +I    + R   +GT  +MAPEV   +R   Y    D W +G   
Sbjct: 136 DDYGHIRISDLGLAVKIPEGESIRGR-VGTVGYMAPEVLNNQR---YTLSPDYWGLGCLI 191

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTF----HNFVKIALTKNPKK 184
            E+ E Q P F     +    + +       L+ ++ +S+ F     +  K+ LTK+PK+
Sbjct: 192 YEMIEGQSP-FRGRKEK----VKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQ 246

Query: 185 R 185
           R
Sbjct: 247 R 247

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G V L DFG+  +         +F GTP ++APEV    RK  Y++  D W +G   
Sbjct: 130 DSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVL---RKEPYDRTVDWWCLGAVL 186

Query: 129 IELAELQPPMF 139
            E+    PP +
Sbjct: 187 YEMLYGLPPFY 197

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 39/155 (25%), Positives = 60/155 (38%), Gaps = 30/155 (19%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G V L DFG+  +         +F GTP ++APEV    RK  Y++  D W +G   
Sbjct: 130 DSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVL---RKQPYDRTVDWWCLGAVL 186

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E+    PP +                     +D    +  + N +   L   P    +A
Sbjct: 187 YEMLYGLPPFYS--------------------RDT---AEMYDNILNKPLRLKPNISVSA 223

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFF 223
             LL+  L+ + R    +R G  +   +I  H FF
Sbjct: 224 RHLLEG-LLQKDR---TKRLGAKDDFLEIKNHVFF 254

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 41.2 bits (96), Expect = 3e-04
 Identities = 17/18 (94%), Positives = 17/18 (94%)

Query: 202 VAAVERKGGYNQQCDIWA 219
           VAAVERKGGYNQ CDIWA
Sbjct: 177 VAAVERKGGYNQLCDIWA 194

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 41.6 bits (97), Expect = 3e-04
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 20  YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADF 79
           Y  + DIW++GI  IE+ + +PP F   P++A+  +  S   PP LK+  +   V L DF
Sbjct: 194 YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS--PPPKLKNAHKISPV-LRDF 250

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 41.3 bits (97), Expect = 3e-04
 Identities = 14/44 (31%), Positives = 25/44 (56%)

Query: 19  GYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKP 62
           GY ++ D+W+VG T +E+   +PP  +   M A+F ++     P
Sbjct: 183 GYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNP 226

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 41.2 bits (96), Expect = 4e-04
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)

Query: 20  YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDV 74
           Y  + DIW++GI  IE+ + +PP F+  P++A+  +  +   PP +KD  +   V
Sbjct: 195 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDN--LPPRVKDSHKVSSV 247

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 40.8 bits (95), Expect = 5e-04
 Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 10/125 (8%)

Query: 74  VKLADFGVSAQITATINKRKSFIG--TPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G     WM+PE     + G +    D+W+ G+   E+
Sbjct: 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL---KDGVFTTYSDVWSFGVVLWEI 214

Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           A L + P   +   + L  + + G     L   D         +++    NPK RP+  +
Sbjct: 215 ATLAEQPYQGMSNEQVLRFVMEGGL----LDKPDNCPDMLFELMRMCWQYNPKMRPSFLE 270

Query: 191 LLQVI 195
           ++  I
Sbjct: 271 IISSI 275

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 40.7 bits (95), Expect = 5e-04
 Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 51/213 (23%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G  KLADFG+  +         +F GTP ++APE+        Y    D WA+G+  
Sbjct: 130 DHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEML---YGPSVDWWAMGVLL 186

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFH----NFVKIALTKNPKK 184
            E+     P F+      LF           L D+  + +       + +K  +TKNP  
Sbjct: 187 YEMLCGHAP-FEAENEDDLF--------EAILNDEVVYPTWLSQDAVDILKAFMTKNPTM 237

Query: 185 RPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK---YDMSKRVAIE------- 234
           R  +  L                 GG   +  I  HPFFK   ++   R  IE       
Sbjct: 238 RLGSLTL-----------------GG---EEAILRHPFFKELDWEKLNRRQIEPPFRPRI 277

Query: 235 -LLQKVSN--PPTTYTD--LEPDDDGEIPNVPQ 262
              + VSN  P     D  L P ++  +P + Q
Sbjct: 278 KSREDVSNFDPDFIKEDPVLTPIEESLLPMINQ 310

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 35/148 (23%), Positives = 54/148 (36%), Gaps = 29/148 (19%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G +KLADFG++    + +     ++ T ++ APE+  +    GY+   DIW+VG    EL
Sbjct: 135 GVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPEL--LLGDKGYSTPVDIWSVGCIFAEL 192

Query: 132 AELQPPMFDLHPMRALF-------------------LMSKSGFKPPALKDKDRWSSTFHN 172
              +P       +  LF                   L     F  P           F N
Sbjct: 193 LSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMP-LPKLFPN 251

Query: 173 -------FVKIALTKNPKKRPTADKLLQ 193
                   +   L  +P KR TA++ L 
Sbjct: 252 ASPQALDLLSQMLHYDPHKRITAEQALA 279

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 40.8 bits (95), Expect = 6e-04
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +KL D+G+  +     +   +F GTP ++APE+    R   Y    D WA+G+  
Sbjct: 130 DADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEIL---RGEEYGFSVDWWALGVLM 186

Query: 129 IELAELQPPMFDL 141
            E+   + P FD+
Sbjct: 187 FEMMAGRSP-FDI 198

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 40.4 bits (94), Expect = 6e-04
 Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 14/125 (11%)

Query: 74  VKLADFGVSAQITATINKRKSFIGT-PY-WMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           +K+ADFG++  +      +K+  G  P  WMAPE A  +R   Y  Q D+W+ G+   E+
Sbjct: 173 MKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPE-ALFDRV--YTHQSDVWSFGVLLWEI 229

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKI---ALTKNPKKRPTA 188
             L    +   P+  LF + K G +       D+ ++  H    I        P +RPT 
Sbjct: 230 FTLGGSPYPGIPVEELFKLLKEGHR------MDKPANCTHELYMIMRECWHAVPSQRPTF 283

Query: 189 DKLLQ 193
            +L++
Sbjct: 284 KQLVE 288

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 40.4 bits (94), Expect = 6e-04
 Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 8/122 (6%)

Query: 74  VKLADFGVSAQITATINKRKSFIGT-PY-WMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           +K+ADFG++  I      +K+  G  P  WMAPE A  +R   Y  Q D+W+ G+   E+
Sbjct: 179 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE-ALFDRI--YTHQSDVWSFGVLLWEI 235

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
             L    +   P+  LF + K G +   +      ++  +  ++      P +RPT  +L
Sbjct: 236 FTLGGSPYPGVPVEELFKLLKEGHR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 292

Query: 192 LQ 193
           ++
Sbjct: 293 VE 294

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 40.1 bits (94), Expect = 7e-04
 Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)

Query: 20  YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD 67
           Y  + DIW++GI  IE+ + +PP F+  P++A+  +  +   PP LK+
Sbjct: 192 YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN--LPPKLKN 237

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 40.1 bits (94), Expect = 8e-04
 Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 18/121 (14%)

Query: 74  VKLADFGVSAQITATINKRKSFIGT-PY-WMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           +K+ADFG++  I      RK+  G  P  WMAPE A  +R   Y  Q D+W+ G+   E+
Sbjct: 171 MKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPE-ALFDRV--YTHQSDVWSFGVLLWEI 227

Query: 132 AELQPPMFDLHPMRALFLMSKSGFK--PPALKDKDRWS---STFHNFVKIALTKNPKKRP 186
             L    +   P+  LF + K G++   P    ++ +      +H        + P +RP
Sbjct: 228 FTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWH--------EVPSQRP 279

Query: 187 T 187
           T
Sbjct: 280 T 280

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 40.2 bits (94), Expect = 8e-04
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L DK + G +K+AD G+    +  +      I T ++ APEV        Y+   DIW+V
Sbjct: 142 LVDKQK-GLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTH--YSTPVDIWSV 198

Query: 125 GITAIELAELQP 136
           G    E++  QP
Sbjct: 199 GCIFAEMSRKQP 210

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 40.0 bits (94), Expect = 8e-04
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 6/58 (10%)

Query: 90  NKRK---SFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM 144
           N+R    S +GTP ++APEV     + GYN++CD W++G+   E+    PP    +P 
Sbjct: 191 NRRALAYSTVGTPDYIAPEVFL---QTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQ 245

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 2/48 (4%)

Query: 20  YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD 67
           Y  + DIW++GI  IE+ + +PP F+  P++A+ ++  +   PP LK+
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN--LPPKLKN 238

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 39/157 (24%), Positives = 61/157 (38%), Gaps = 29/157 (18%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G VKL DFG+  +         +F GT  +MAPE+     + G+ +  D W++G   
Sbjct: 134 DAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILM---RSGHGKAVDWWSLGAL- 189

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
                    M+D         M      PP   +  +   T    +K  L   P   P A
Sbjct: 190 ---------MYD---------MLTGA--PPFTAENRK--KTIDKILKGKLNLPPYLTPEA 227

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKY 225
             LL+ +L    R  +     G     ++ +HPFF++
Sbjct: 228 RDLLKKLL---KRNPSSRLGAGPGDAAEVQSHPFFRH 261

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 13/103 (12%)

Query: 37  AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQIT--ATINKRKS 94
           AE+   + DLH  R ++       KP  +   D  G ++++D G++  +    TI  R  
Sbjct: 109 AEICCGLEDLHQERIVY----RDLKPENILLDDH-GHIRISDLGLAVHVPEGQTIKGR-- 161

Query: 95  FIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPP 137
            +GT  +MAPEV   ER   Y    D WA+G    E+   Q P
Sbjct: 162 -VGTVGYMAPEVVKNER---YTFSPDWWALGCLLYEMIAGQSP 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 6/57 (10%)

Query: 90  NKRK---SFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHP 143
           N+R+   S +GTP ++APEV     + GYN+ CD W++G+   E+    PP     P
Sbjct: 188 NRRQLAFSTVGTPDYIAPEVFM---QTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP 241

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 38.9 bits (90), Expect = 0.002
 Identities = 15/18 (83%), Positives = 16/18 (88%)

Query: 202 VAAVERKGGYNQQCDIWA 219
           VAAVE+ GGYNQ CDIWA
Sbjct: 177 VAAVEKNGGYNQLCDIWA 194

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 38.7 bits (91), Expect = 0.002
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 16  RKGGYNQQCDIWAVGITAIELAELQPPMFDLH-PMRALFLMSKSGFKPP 63
           R   Y +  DIW++G T IE+A  +PP  +L  PM AL+ +  SG  P 
Sbjct: 176 RGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPE 224

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 38.8 bits (90), Expect = 0.002
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)

Query: 19  GYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK 57
           GYN + DI++VGITA ELA  + P  D+   R   L+ K
Sbjct: 186 GYNVKSDIYSVGITACELATGRVPFQDML--RTQMLLQK 222

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G + L DFG+  +         +F GTP ++APEV     K  Y++  D W +G   
Sbjct: 130 DSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVL---HKQPYDRTVDWWCLGAVL 186

Query: 129 IELAELQPPMF 139
            E+    PP +
Sbjct: 187 YEMLYGLPPFY 197

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 10/116 (8%)

Query: 75  KLADFGVSAQI---TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           K++DFG+S  +    + + + K  I    WMA E         Y  Q D+W+ G+   E+
Sbjct: 167 KISDFGLSRDVYEEDSYVKRSKGRIPVK-WMAIESLFDHI---YTTQSDVWSFGVLLWEI 222

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT 187
             L    +       LF + K+G++   ++  +  S   +N +     + P KRPT
Sbjct: 223 VTLGGNPYPGIAPERLFNLLKTGYR---MERPENCSEEMYNLMLTCWKQEPDKRPT 275

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 19/97 (19%)

Query: 49  MRALFLMSKSG-----FKPPALKDKDRCGDVKLADFGVS----AQITATINKRKSFIGTP 99
           +R L  +  +G      KP  +   + C D+K+ DFG++     Q+T        ++ T 
Sbjct: 118 LRGLKYVHSAGVVHRDLKPSNILINENC-DLKICDFGLARIQDPQMTG-------YVSTR 169

Query: 100 YWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQP 136
           Y+ APE+    +K  Y+ + DIW+ G    E+ E +P
Sbjct: 170 YYRAPEIMLTWQK--YDVEVDIWSAGCIFAEMLEGKP 204

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 38.9 bits (90), Expect = 0.002
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 6/51 (11%)

Query: 90  NKRK---SFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPP 137
           N+R+   S +GTP ++APEV     + GYN+ CD W++G+   E+    PP
Sbjct: 188 NRRQLAYSTVGTPDYIAPEVFM---QTGYNKLCDWWSLGVIMYEMLIGYPP 235

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 38.8 bits (90), Expect = 0.002
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L DKD  G +K+ DFG  A++  T  +  +  GTP ++APE+       G+ +  D W +
Sbjct: 163 LLDKD--GFIKMTDFGF-AKVVDT--RTYTLCGTPEYIAPEILL---NVGHGKAADWWTL 214

Query: 125 GITAIELAELQPPMFDLHPM 144
           GI   E+    PP +   P+
Sbjct: 215 GIFIYEILVGCPPFYANEPL 234

Length = 340

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G++KLADFG++      +N   + + T ++ AP+V    R   Y+   DIW+VG    E+
Sbjct: 137 GELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRT--YSTSIDIWSVGCIMAEM 194

Query: 132 AELQP 136
              +P
Sbjct: 195 ITGRP 199

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 19  GYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFK---PPALKDKDR 70
           GY ++ DIW+VG T +E+   +PP  +   M A+F ++        PP + D  R
Sbjct: 185 GYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCR 239

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 13/45 (28%), Positives = 25/45 (55%)

Query: 19  GYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP 63
           GY ++ D+W++G T +E+   +PP  +   M A+F ++     P 
Sbjct: 185 GYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQ 229

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 38.5 bits (89), Expect = 0.003
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)

Query: 74  VKLADFGVSAQITATINKRKSFIGT-PY-WMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           +K+ADFG++  +      +K+  G  P  WMAPE A  +R   Y  Q D+W+ G+   E+
Sbjct: 176 MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPE-ALFDRV--YTHQSDVWSFGVLMWEI 232

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
             L    +   P+  LF + K G +   +      ++  +  ++      P  RPT  +L
Sbjct: 233 FTLGGSPYPGIPVEELFKLLKEGHR---MDKPANCTNELYMMMRDCWHAIPSHRPTFKQL 289

Query: 192 LQ 193
           ++
Sbjct: 290 VE 291

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 38.4 bits (89), Expect = 0.003
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 4/70 (5%)

Query: 72  GDVKLADFGVSA-QITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIE 130
           GDV L DFG +   +    NK   + GT    APE+ A   +  Y    DIW+ GI   E
Sbjct: 219 GDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLA---RDPYGPAVDIWSAGIVLFE 275

Query: 131 LAELQPPMFD 140
           +A     +F+
Sbjct: 276 MATCHDSLFE 285

Length = 391

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 9/66 (13%)

Query: 74  VKLADFGVSAQITATINKRKSF---IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIE 130
           +KLADFG S      I  +  +   I T ++ APE    +  G Y  + DIWAVG    E
Sbjct: 138 LKLADFG-SC---RGIYSKPPYTEYISTRWYRAPECLLTD--GYYGPKMDIWAVGCVFFE 191

Query: 131 LAELQP 136
           +  L P
Sbjct: 192 ILSLFP 197

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	302
KOG0616|consensus	355		100.0
KOG0598|consensus	357		100.0
KOG0575|consensus	592		100.0
KOG0592|consensus	604		100.0
KOG0581|consensus	364		100.0
KOG0615|consensus	475		100.0
KOG0605|consensus	550		100.0
KOG0694|consensus	694		100.0
KOG0578|consensus	550		100.0
KOG0033|consensus	355		100.0
KOG0588|consensus	786		100.0
KOG0583|consensus	370		100.0
KOG0696|consensus	683		100.0
KOG0579|consensus	1187		100.0
KOG0591|consensus	375		100.0
KOG0661|consensus	538		100.0
KOG0599|consensus	411		100.0
KOG0595|consensus	429		100.0
KOG0593|consensus	396		100.0
KOG0610|consensus	459		100.0
KOG0198|consensus	313		100.0
KOG0201|consensus	467		100.0
KOG0690|consensus	516		100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
KOG0574|consensus	502		100.0
KOG0986|consensus	591		100.0
KOG0582|consensus	516		100.0
KOG0597|consensus	808		100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
KOG0612|consensus	1317		100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
KOG0660|consensus	359		100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
KOG0614|consensus	732		100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
KOG0604|consensus	400		100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
KOG4717|consensus	864		100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
KOG0589|consensus	426		100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
KOG0663|consensus	419		100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
KOG0659|consensus	318		100.0
KOG0658|consensus	364		100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
KOG0032|consensus	382		100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
KOG0580|consensus	281		100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
KOG0611|consensus	668		100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
KOG0600|consensus	560		100.0
KOG0585|consensus	576		100.0
KOG0192|consensus	362		100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
KOG0695|consensus	593		100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG0577|consensus	948		100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
KOG0608|consensus	1034		100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
KOG4721|consensus	904		100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
KOG0594|consensus	323		100.0
KOG4645|consensus	1509		100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
KOG0596|consensus	677		100.0
KOG0667|consensus	586		100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
KOG4279|consensus	1226		100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
KOG0983|consensus	391		100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
KOG1989|consensus	738		100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
KOG0197|consensus	468		100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
KOG0576|consensus	829		100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
KOG0584|consensus	632		100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
KOG0603|consensus	612		100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
KOG0587|consensus	953		100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
KOG0607|consensus	463		100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	99.98
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.98
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.98
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.98
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.98
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.98
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.98
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.98
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.98
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.98
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.98
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.98
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.98
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.97
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.97
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.97
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.97
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.97
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.97
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.97
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.97
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.97
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.97
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.97
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.97
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.97
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.97
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.97
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.97
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.97
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.97
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.97
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.97
KOG0665|consensus	369		99.97
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.97
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.97
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.97
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.97
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.97
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.97
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.97
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.97
KOG0586|consensus	596		99.97
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.97
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.97
KOG0193|consensus	678		99.97
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.97
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.97
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.97
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.97
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.97
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.97
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.97
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.97
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.97
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.97
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.97
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.97
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.97
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.97
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.97
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.97
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.97
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.97
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.97
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.97
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.97
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.97
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.97
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.97
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.97
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.97
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.97
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.97
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.97
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.97
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.97
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.97
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.97
PLN00009	294	cyclin-dependent kinase A; Provisional	99.97
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.97
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.97
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.97
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.97
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.97
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.97
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.97
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.97
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.97
PHA03210	501	serine/threonine kinase US3; Provisional	99.97
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.97
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.97
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.97
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.97
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.97
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.97
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.97
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.97
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.97
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.97
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.97
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.97
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.97
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.97
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.97
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.97
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.97
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.97
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.97
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.97
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.97
KOG1006|consensus	361		99.97
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.97
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.97
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.97
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.97
KOG0666|consensus	438		99.97
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.97
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.97
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.97
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.97
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.97
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.97
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.97
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.97
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.97
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.97
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.97
KOG0671|consensus	415		99.97
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.97
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.97
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.97
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.97
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.97
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.97
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.97
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.97
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.97
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.97
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.97
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.97
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.97
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.97
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.97
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.97
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.97
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.97
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.97
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.97
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.97
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.97
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.97
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.97
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.97
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.97
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.97
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.97
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.97
KOG2345|consensus	302		99.96
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.96
KOG0669|consensus	376		99.96
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.96
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.96
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.96
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.96
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.96
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.96
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.96
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.96
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.96
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.96
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.96
KOG0194|consensus	474		99.96
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.96
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.96
KOG0662|consensus	292		99.96
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.96
KOG1026|consensus	774		99.96
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.96
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.96
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.96
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.96
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.96
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.96
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.96
KOG0670|consensus	752		99.96
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.96
PHA02882	294	putative serine/threonine kinase; Provisional	99.96
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.96
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.96
KOG1151|consensus	775		99.96
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.96
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.96
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.96
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.96
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.96
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.96
KOG0664|consensus	449		99.96
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.96
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.96
KOG1095|consensus	1025		99.96
KOG1035|consensus	1351		99.96
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.96
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.95
KOG4236|consensus	888		99.95
KOG1027|consensus	903		99.95
PLN00181	793	protein SPA1-RELATED; Provisional	99.95
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.95
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.95
KOG4250|consensus	732		99.95
KOG0668|consensus	338		99.95
KOG0984|consensus	282		99.94
KOG4257|consensus	974		99.94
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.94
KOG0196|consensus	996		99.94
KOG1187|consensus	361		99.94
KOG4278|consensus	1157		99.93
KOG0199|consensus	1039		99.93
KOG0200|consensus	609		99.92
KOG1290|consensus	590		99.92
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.92
KOG1094|consensus	807		99.91
KOG1167|consensus	418		99.91
KOG3653|consensus	534		99.9
KOG2052|consensus	513		99.9
KOG1345|consensus	378		99.89
KOG1025|consensus	1177		99.89
KOG1024|consensus	563		99.89
KOG0590|consensus	601		99.89
KOG0603|consensus	612		99.88
KOG1152|consensus	772		99.87
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.86
KOG0606|consensus	1205		99.85
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.83
KOG4158|consensus	598		99.78
KOG1033|consensus	516		99.76
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.75
KOG1164|consensus	322		99.73
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.72
KOG1023|consensus	484		99.68
KOG1240|consensus	1431		99.65
KOG0195|consensus	448		99.61
KOG0606|consensus	1205		99.61
KOG1165|consensus	449		99.6
KOG0590|consensus	601		99.56
KOG1163|consensus	341		99.55
PRK12274	218	serine/threonine protein kinase; Provisional	99.55
PRK09188	365	serine/threonine protein kinase; Provisional	99.52
KOG1166|consensus	974		99.39
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.38
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.35
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.34
KOG1266|consensus	458		99.25
PRK10345	210	hypothetical protein; Provisional	99.15
smart00090	237	RIO RIO-like kinase.	99.15
KOG2137|consensus	700		99.09
KOG0601|consensus	524		99.07
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.02
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.94
PRK14879	211	serine/threonine protein kinase; Provisional	98.92
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.89
KOG1243|consensus	690		98.87
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.84
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.81
KOG0601|consensus	524		98.71
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.68
COG4248	637	Uncharacterized protein with protein kinase and he	98.37
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.35
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.33
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.3
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.21
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.11
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.04
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.04
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.97
KOG3741|consensus	655		97.91
KOG3087|consensus	229		97.9
KOG1035|consensus	1351		97.87
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.53
KOG0576|consensus	829		97.35
PRK09902	216	hypothetical protein; Provisional	97.25
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.17
KOG1826|consensus	2724		97.12
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	96.45
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	96.29
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	95.79
COG0661	517	AarF Predicted unusual protein kinase [General fun	95.63
KOG2268|consensus	465		94.93
KOG1235|consensus	538		94.24
KOG1093|consensus	725		92.49
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	90.35
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	88.2
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	87.23
KOG2270|consensus	520		84.91

>KOG0616|consensus

Probab=100.00  E-value=2.8e-47  Score=312.92  Aligned_cols=205  Identities=24%  Similarity=0.372  Sum_probs=180.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      +|++++.|.    +|+||||++||.|+ .++++.+   +|++..+++++.||+.||+|||+++|++||+||    ++.+|
T Consensus       106 lv~l~~t~~d~~~lymvmeyv~GGElF-S~Lrk~~---rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G  181 (355)
T KOG0616|consen  106 LVKLYGTFKDNSNLYMVMEYVPGGELF-SYLRKSG---RFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNG  181 (355)
T ss_pred             eEEEEEeeccCCeEEEEEeccCCccHH-HHHHhcC---CCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCC
Confidence            456666555    69999999999999 8888888   899999999999999999999999999999999    99999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+|+.+...   ..+.|||+.|+|||+++   .++|+.++|||||||++|||++|.+||...++..+..+|..
T Consensus       182 ~iKitDFGFAK~v~~r---T~TlCGTPeYLAPEii~---sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~  255 (355)
T KOG0616|consen  182 HIKITDFGFAKRVSGR---TWTLCGTPEYLAPEIIQ---SKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILE  255 (355)
T ss_pred             cEEEEeccceEEecCc---EEEecCCccccChHHhh---cCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHh
Confidence            9999999999988753   56789999999999996   88899999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCC-CCCccccCCCccccchhhHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGY-NQQCDIWAHPFFKYDMSKRV  231 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~-~~~~~i~~hp~f~~~~~~~~  231 (302)
                      .....|     ..++.++++||+++|+.|-.+|.                      |+. .|.+||++||||++..|..+
T Consensus       256 ~~v~fP-----~~fs~~~kdLl~~LL~vD~t~R~----------------------gnlknG~~dIk~H~wF~~v~W~~i  308 (355)
T KOG0616|consen  256 GKVKFP-----SYFSSDAKDLLKKLLQVDLTKRF----------------------GNLKNGVEDIKNHPWFKGVDWEAI  308 (355)
T ss_pred             CcccCC-----cccCHHHHHHHHHHHhhhhHhhh----------------------cCcCCCccccccCcccccccHHHH
Confidence            876665     67899999999999999988774                      333 48999999999998888777


Q ss_pred             HHHHhhhcCCC
Q psy3574         232 AIELLQKVSNP  242 (302)
Q Consensus       232 ~~~~~~~~~~~  242 (302)
                      ....++....|
T Consensus       309 ~~r~ie~P~~p  319 (355)
T KOG0616|consen  309 LQRKIEPPFEP  319 (355)
T ss_pred             hhccccCCCCC
Confidence            65554444433

>KOG0598|consensus

Probab=100.00  E-value=1.2e-46  Score=318.44  Aligned_cols=220  Identities=23%  Similarity=0.332  Sum_probs=184.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||+++-.||    +|+|+||+.||+|. ..+++.+   .|+|+.++.++.+|+.||.|||++||+|||+||    ++..|
T Consensus        87 iv~l~ysFQt~~kLylVld~~~GGeLf-~hL~~eg---~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~G  162 (357)
T KOG0598|consen   87 IVKLIYSFQTEEKLYLVLDYLNGGELF-YHLQREG---RFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQG  162 (357)
T ss_pred             EeeeEEecccCCeEEEEEeccCCccHH-HHHHhcC---CcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCC
Confidence            567777777    59999999999999 8888887   899999999999999999999999999999999    99999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      +|+|+|||+++..........++|||+.|||||++.   +.+|+..+||||||+++|+|++|.+||.+.+......+|..
T Consensus       163 Hi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~---~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~  239 (357)
T KOG0598|consen  163 HIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILL---GKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILK  239 (357)
T ss_pred             cEEEeccccchhcccCCCccccccCCccccChHHHh---cCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhc
Confidence            999999999997776666777899999999999997   77899999999999999999999999999999999999888


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVA  232 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~  232 (302)
                      .....+    +..++.+++++|+++|..||++|..                      +..++.+|++||||....|..+.
T Consensus       240 ~k~~~~----p~~ls~~ardll~~LL~rdp~~RLg----------------------~~~d~~~ik~HpfF~~inW~~l~  293 (357)
T KOG0598|consen  240 GKLPLP----PGYLSEEARDLLKKLLKRDPRQRLG----------------------GPGDAEEIKRHPFFKGINWEKLL  293 (357)
T ss_pred             CcCCCC----CccCCHHHHHHHHHHhccCHHHhcC----------------------CCCChHHhhcCcccccCCHHHHH
Confidence            762222    3458999999999999999999975                      24566678889999987776554


Q ss_pred             HHHhhhcCCCCCCCCCCCCCCCCCC
Q psy3574         233 IELLQKVSNPPTTYTDLEPDDDGEI  257 (302)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~  257 (302)
                          ++...|+..+......+...+
T Consensus       294 ----~k~l~PpF~P~~~~~~~~~~F  314 (357)
T KOG0598|consen  294 ----AKKLSPPFKPNVTGLEDTSNF  314 (357)
T ss_pred             ----hcCCCCCeecCCCCccccccc
Confidence                444444444444444443333

>KOG0575|consensus

Probab=100.00  E-value=2.9e-46  Score=333.36  Aligned_cols=181  Identities=23%  Similarity=0.359  Sum_probs=171.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||+||+.|.    +|||+|+|..|+|. .+++++.   +++|.+++.+++||+.||.|||+++|+|||||.    ++++.
T Consensus        80 IV~f~~~FEDs~nVYivLELC~~~sL~-el~Krrk---~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~  155 (592)
T KOG0575|consen   80 IVQFYHFFEDSNNVYIVLELCHRGSLM-ELLKRRK---PLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENM  155 (592)
T ss_pred             EEeeeeEeecCCceEEEEEecCCccHH-HHHHhcC---CCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcC
Confidence            789999998    59999999999999 8888776   999999999999999999999999999999999    88999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      +|||+|||+|..+........+.||||.|+|||++.   ..+++..+||||+|||||.||.|++||...+-.+...+|..
T Consensus       156 ~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~---k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~  232 (592)
T KOG0575|consen  156 NVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLN---KSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKL  232 (592)
T ss_pred             cEEecccceeeeecCcccccceecCCCcccChhHhc---cCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHh
Confidence            999999999999998878889999999999999996   78899999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+..|     ..++.++++||.+||..||.+|||++++|.
T Consensus       233 ~~Y~~P-----~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  233 NEYSMP-----SHLSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             cCcccc-----cccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            888776     478999999999999999999999999999

>KOG0592|consensus

Probab=100.00  E-value=5.3e-45  Score=320.81  Aligned_cols=197  Identities=20%  Similarity=0.347  Sum_probs=178.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |||+|-+|+    +|+|+||+++|+|. +++++.+   .|++..+++++.||+.||+|||++|||||||||    ++.+|
T Consensus       136 ivkLy~TFQD~~sLYFvLe~A~nGdll-~~i~K~G---sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dm  211 (604)
T KOG0592|consen  136 IVKLYFTFQDEESLYFVLEYAPNGDLL-DLIKKYG---SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDG  211 (604)
T ss_pred             eEEEEEEeecccceEEEEEecCCCcHH-HHHHHhC---cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCC
Confidence            688898998    59999999999999 8888888   899999999999999999999999999999999    99999


Q ss_pred             CEEEeccccccccccccc-------------cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCC
Q psy3574          73 DVKLADFGVSAQITATIN-------------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMF  139 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~  139 (302)
                      ++||+|||.|+.+.....             ...+++||-.|.+||++.   ....+..+|+|+|||++|+|+.|++||.
T Consensus       212 hikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~---~~~~~~~sDiWAlGCilyQmlaG~PPFr  288 (604)
T KOG0592|consen  212 HIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLN---DSPAGPSSDLWALGCILYQMLAGQPPFR  288 (604)
T ss_pred             cEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhc---CCCCCcccchHHHHHHHHHHhcCCCCCc
Confidence            999999999998754211             125689999999999996   6778899999999999999999999999


Q ss_pred             CCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccC
Q psy3574         140 DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWA  219 (302)
Q Consensus       140 ~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~  219 (302)
                      +.++.-.+.+|....+..+     ..+++.++|||+++|..||.+|+|+++|.+                          
T Consensus       289 a~NeyliFqkI~~l~y~fp-----~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~--------------------------  337 (604)
T KOG0592|consen  289 AANEYLIFQKIQALDYEFP-----EGFPEDARDLIKKLLVRDPSDRLTSQQIKA--------------------------  337 (604)
T ss_pred             cccHHHHHHHHHHhcccCC-----CCCCHHHHHHHHHHHccCccccccHHHHhh--------------------------
Confidence            9999999999999877665     678899999999999999999999999988                          


Q ss_pred             CCccccchhhHHHHHH
Q psy3574         220 HPFFKYDMSKRVAIEL  235 (302)
Q Consensus       220 hp~f~~~~~~~~~~~~  235 (302)
                      ||||.+.+|..+|...
T Consensus       338 HpFF~~Vdw~nlw~~~  353 (604)
T KOG0592|consen  338 HPFFEGVDWENLWQQT  353 (604)
T ss_pred             CcccccCChhhhhhcC
Confidence            9999999999866433

>KOG0581|consensus

Probab=100.00  E-value=1.6e-45  Score=311.83  Aligned_cols=181  Identities=27%  Similarity=0.443  Sum_probs=160.8

Q ss_pred             Cchhhhcch-----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh-CCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL-----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK-SGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~-----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~i~Hrdlkp----~~~   70 (302)
                      ||+|||.|+     .+|+||||.||+|. .+++..+   .++|..+..++.++++||.|||+ ++|+||||||    ++.
T Consensus       139 IV~~ygaF~~~~~~isI~mEYMDgGSLd-~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNs  214 (364)
T KOG0581|consen  139 IVGFYGAFYSNGEEISICMEYMDGGSLD-DILKRVG---RIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNS  214 (364)
T ss_pred             eeeEeEEEEeCCceEEeehhhcCCCCHH-HHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeecc
Confidence            789999887     48999999999999 8888777   79999999999999999999996 8999999999    899


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----ChHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL-----HPMR  145 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-----~~~~  145 (302)
                      .|.|||||||.++.+.+.  ...+++||..|||||-+.   +..|+.++||||||+++.||+.|+.||...     ...+
T Consensus       215 kGeVKicDFGVS~~lvnS--~a~tfvGT~~YMsPERi~---g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~  289 (364)
T KOG0581|consen  215 KGEVKICDFGVSGILVNS--IANTFVGTSAYMSPERIS---GESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFE  289 (364)
T ss_pred             CCCEEeccccccHHhhhh--hcccccccccccChhhhc---CCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHH
Confidence            999999999999998875  567889999999999996   778999999999999999999999999764     5666


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+..|...  .+|.++. ..+|+++++||..||++||.+|+++.++++
T Consensus       290 Ll~~Iv~~--ppP~lP~-~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  290 LLCAIVDE--PPPRLPE-GEFSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             HHHHHhcC--CCCCCCc-ccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            66667664  3333322 259999999999999999999999999999

>KOG0615|consensus

Probab=100.00  E-value=4.1e-46  Score=318.19  Aligned_cols=187  Identities=22%  Similarity=0.251  Sum_probs=158.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-------CC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-------KD   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-------~~   69 (302)
                      ||+++++|.    +||||||++||+|. +.+-.++   .+.|+..+.+++|++.||.|||++||+||||||       ..
T Consensus       238 IV~~~d~f~~~ds~YmVlE~v~GGeLf-d~vv~nk---~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~  313 (475)
T KOG0615|consen  238 IVRIKDFFEVPDSSYMVLEYVEGGELF-DKVVANK---YLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDA  313 (475)
T ss_pred             EEEEeeeeecCCceEEEEEEecCccHH-HHHHhcc---ccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCC
Confidence            688888887    49999999999999 5555555   699999999999999999999999999999999       22


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR-ALF  148 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~  148 (302)
                      .+..+||+|||+|+.... .....++|||+.|.|||++.......+..++|+||+||++|-+++|.+||.+..... ...
T Consensus       314 e~~llKItDFGlAK~~g~-~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~e  392 (475)
T KOG0615|consen  314 EDCLLKITDFGLAKVSGE-GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKE  392 (475)
T ss_pred             cceEEEecccchhhcccc-ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHH
Confidence            457899999999998764 366788999999999999975544455678999999999999999999998765555 555


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +|.++.+.... ..+..++.++.+||++||..||++|||+.++|+
T Consensus       393 QI~~G~y~f~p-~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  393 QILKGRYAFGP-LQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             HHhcCcccccC-hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            66666554332 345789999999999999999999999999999

>KOG0605|consensus

Probab=100.00  E-value=3.2e-45  Score=322.11  Aligned_cols=200  Identities=22%  Similarity=0.316  Sum_probs=170.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |||+|=.|+    +||||||++||++. .++.+.+   .|+++++++++.+++.|+..||+.|++||||||    ++..|
T Consensus       203 vVKLyYsFQD~~~LYLiMEylPGGD~m-TLL~~~~---~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~G  278 (550)
T KOG0605|consen  203 VVKLYYSFQDKEYLYLIMEYLPGGDMM-TLLMRKD---TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKG  278 (550)
T ss_pred             EEEEEEEecCCCeeEEEEEecCCccHH-HHHHhcC---cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCC
Confidence            689998998    59999999999999 7888777   899999999999999999999999999999999    99999


Q ss_pred             CEEEeccccccccccc-----------------------cc------------------------cccccccCcccchhh
Q psy3574          73 DVKLADFGVSAQITAT-----------------------IN------------------------KRKSFIGTPYWMAPE  105 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~-----------------------~~------------------------~~~~~~gt~~y~aPE  105 (302)
                      +|||+|||++..+...                       ..                        ...+.+|||.|||||
T Consensus       279 HiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPE  358 (550)
T KOG0605|consen  279 HIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPE  358 (550)
T ss_pred             CEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchH
Confidence            9999999999643110                       00                        012367999999999


Q ss_pred             cccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCC
Q psy3574         106 VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR  185 (302)
Q Consensus       106 ~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R  185 (302)
                      ++.   +.+|+..+||||||||+||||.|.+||.+.++.+...+|......... +....++.+++|||.+||. ||++|
T Consensus       359 Vll---~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~f-P~~~~~s~eA~DLI~rll~-d~~~R  433 (550)
T KOG0605|consen  359 VLL---GKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKF-PEEVDLSDEAKDLITRLLC-DPENR  433 (550)
T ss_pred             HHh---cCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccC-CCcCcccHHHHHHHHHHhc-CHHHh
Confidence            997   788999999999999999999999999999999999999886633222 1235578999999999999 99999


Q ss_pred             CCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHH
Q psy3574         186 PTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVA  232 (302)
Q Consensus       186 ~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~  232 (302)
                      ..                       ..|++|||.||||++..|..+.
T Consensus       434 LG-----------------------~~G~~EIK~HPfF~~v~W~~l~  457 (550)
T KOG0605|consen  434 LG-----------------------SKGAEEIKKHPFFKGVDWDHLR  457 (550)
T ss_pred             cC-----------------------cccHHHHhcCCccccCCcchhh
Confidence            85                       3566677779999988887654

>KOG0694|consensus

Probab=100.00  E-value=7.2e-45  Score=328.08  Aligned_cols=224  Identities=24%  Similarity=0.331  Sum_probs=191.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+..|.-|+    +|+||||+.||++. .+.+..    .|++..+++|++.|+.||.|||++|||+||||.    ++..|
T Consensus       431 L~~L~~~fQT~~~l~fvmey~~Ggdm~-~~~~~~----~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eG  505 (694)
T KOG0694|consen  431 LVNLFSCFQTKEHLFFVMEYVAGGDLM-HHIHTD----VFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEG  505 (694)
T ss_pred             EeecccccccCCeEEEEEEecCCCcEE-EEEecc----cccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccC
Confidence            466788888    69999999999976 544444    599999999999999999999999999999999    99999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+++..........++|||+.|||||++.   +..|+.++|||||||+||||+.|..||.+++..+....|..
T Consensus       506 h~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~---e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~  582 (694)
T KOG0694|consen  506 HVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLT---EQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVN  582 (694)
T ss_pred             cEEecccccccccCCCCCccccccCChhhcChhhhc---cCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhc
Confidence            999999999999886667888999999999999996   78899999999999999999999999999999999999998


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVA  232 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~  232 (302)
                      .....|     ..++.++.++++++|.++|++|+.+                     +..+.++|+.||||+...|..  
T Consensus       583 d~~~yP-----~~ls~ea~~il~~ll~k~p~kRLG~---------------------~e~d~~~i~~hpFFr~i~w~~--  634 (694)
T KOG0694|consen  583 DEVRYP-----RFLSKEAIAIMRRLLRKNPEKRLGS---------------------GERDAEDIKKHPFFRSIDWDD--  634 (694)
T ss_pred             CCCCCC-----CcccHHHHHHHHHHhccCcccccCC---------------------CCCCchhhhhCCccccCCHHH--
Confidence            765554     5689999999999999999999975                     345677788899999877654  


Q ss_pred             HHHhhhcCCCCCCCCCCCCCCCCCCCCcch
Q psy3574         233 IELLQKVSNPPTTYTDLEPDDDGEIPNVPQ  262 (302)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (302)
                        +.++...||..+....+.|-..++....
T Consensus       635 --L~~r~i~PPf~P~i~~~~D~snFd~eFt  662 (694)
T KOG0694|consen  635 --LLNRRIKPPFVPTIKGPEDVSNFDEEFT  662 (694)
T ss_pred             --HhhccCCCCCCcccCChhhhcccchhhh
Confidence              4455566777666666666555554333

>KOG0578|consensus

Probab=100.00  E-value=4.1e-44  Score=317.15  Aligned_cols=183  Identities=32%  Similarity=0.590  Sum_probs=170.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||+|++.|.    +|+||||++||+|. +++....    ++|.++..|+++++.||+|||.+||+|||||.    +..+|
T Consensus       332 iVnfl~Sylv~deLWVVMEym~ggsLT-DvVt~~~----~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g  406 (550)
T KOG0578|consen  332 IVNFLDSYLVGDELWVVMEYMEGGSLT-DVVTKTR----MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDG  406 (550)
T ss_pred             HHHHHHHhcccceeEEEEeecCCCchh-hhhhccc----ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCC
Confidence            588888887    49999999999998 8887765    99999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..+........+.+||+.|||||++.   ...|+.++||||||+++.||+.|.+||...++...++.|..
T Consensus       407 ~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvt---rk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~  483 (550)
T KOG0578|consen  407 SVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVT---RKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT  483 (550)
T ss_pred             cEEEeeeeeeeccccccCccccccCCCCccchhhhh---hcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhh
Confidence            999999999999988777788899999999999996   77899999999999999999999999999999999999988


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+  .|.++.+..+|+.+++||.+||+.|+.+|+++.+||+
T Consensus       484 ng--~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  484 NG--TPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             cC--CCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence            75  5666778999999999999999999999999999999

>KOG0033|consensus

Probab=100.00  E-value=3e-42  Score=276.65  Aligned_cols=176  Identities=28%  Similarity=0.387  Sum_probs=159.9

Q ss_pred             hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-------CCCCCCEEEecccc
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-------KDRCGDVKLADFGV   81 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-------~~~~~~ikL~DFg~   81 (302)
                      +.|||+|++.||+|..++.++.    .++|..+..+++||+.||.|||.+||+|||+||       .+...-+||+|||+
T Consensus        84 ~~ylvFe~m~G~dl~~eIV~R~----~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGv  159 (355)
T KOG0033|consen   84 FHYLVFDLVTGGELFEDIVARE----FYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGL  159 (355)
T ss_pred             eeEEEEecccchHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccce
Confidence            4689999999999998888874    499999999999999999999999999999999       55667899999999


Q ss_pred             ccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCC
Q psy3574          82 SAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK  161 (302)
Q Consensus        82 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  161 (302)
                      |..+.+ ......++|||+|||||++.   ...|+..+|||++||+||-++.|.+||.+.+..+....|....+..+. .
T Consensus       160 Ai~l~~-g~~~~G~~GtP~fmaPEvvr---kdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~-~  234 (355)
T KOG0033|consen  160 AIEVND-GEAWHGFAGTPGYLSPEVLK---KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPS-P  234 (355)
T ss_pred             EEEeCC-ccccccccCCCcccCHHHhh---cCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCC-c
Confidence            999884 35567789999999999994   788999999999999999999999999999999999999888776654 2


Q ss_pred             CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         162 DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       162 ~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+.++++++++|+++||..||.+|+|+.|+|+
T Consensus       235 ~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  235 EWDTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             ccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence            46789999999999999999999999999999

>KOG0588|consensus

Probab=100.00  E-value=2.7e-42  Score=309.78  Aligned_cols=180  Identities=21%  Similarity=0.296  Sum_probs=162.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      +++.|+.|.    +|+|+||++||.|+ +++-.++   +|+|.++.++++||+.|+.|||..+|+|||+||    ++..+
T Consensus        74 Vl~LydVwe~~~~lylvlEyv~gGELF-dylv~kG---~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~  149 (786)
T KOG0588|consen   74 VLRLYDVWENKQHLYLVLEYVPGGELF-DYLVRKG---PLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKN  149 (786)
T ss_pred             eeeeeeeeccCceEEEEEEecCCchhH-HHHHhhC---CCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhccc
Confidence            356677666    69999999999999 7777777   899999999999999999999999999999999    88888


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +|||+|||.|.....+ ....+.||+++|.|||++.   +..| +.++||||+|||||.|++|++||.+++-...+.++.
T Consensus       150 nIKIADFGMAsLe~~g-klLeTSCGSPHYA~PEIV~---G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~  225 (786)
T KOG0588|consen  150 NIKIADFGMASLEVPG-KLLETSCGSPHYAAPEIVS---GRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQ  225 (786)
T ss_pred             CEeeeccceeecccCC-ccccccCCCcccCCchhhc---CCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence            8999999999765554 5667889999999999997   5555 689999999999999999999999998888888888


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ++.+..|     ..++.++++||++||..||.+|+|.+++++
T Consensus       226 ~G~f~MP-----s~Is~eaQdLLr~ml~VDp~~RiT~~eI~k  262 (786)
T KOG0588|consen  226 RGVFEMP-----SNISSEAQDLLRRMLDVDPSTRITTEEILK  262 (786)
T ss_pred             cCcccCC-----CcCCHHHHHHHHHHhccCccccccHHHHhh
Confidence            8877665     778999999999999999999999999999

>KOG0583|consensus

Probab=100.00  E-value=2e-41  Score=300.99  Aligned_cols=181  Identities=25%  Similarity=0.333  Sum_probs=158.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC-
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC-   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~-   71 (302)
                      |+|+++.+.    +|+|||||.||+|+ +++...+   ++.|.+++.+++||+.|++|||++||+||||||    ++.+ 
T Consensus        82 I~~l~ev~~t~~~~~ivmEy~~gGdL~-~~i~~~g---~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~  157 (370)
T KOG0583|consen   82 IIRLLEVFATPTKIYIVMEYCSGGDLF-DYIVNKG---RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE  157 (370)
T ss_pred             EeEEEEEEecCCeEEEEEEecCCccHH-HHHHHcC---CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC
Confidence            455666555    59999999999999 6666677   899999999999999999999999999999999    7777 


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCC-C-CchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG-Y-NQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      +.+||+|||++...........+.|||+.|+|||++.   +.. | +.++||||+||+||.|++|+.||.+.+......+
T Consensus       158 ~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~---~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k  234 (370)
T KOG0583|consen  158 GNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLS---GKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK  234 (370)
T ss_pred             CCEEEeccccccccCCCCCcccCCCCCcccCCHHHhC---CCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH
Confidence            9999999999987743335677889999999999997   444 6 5899999999999999999999999888888888


Q ss_pred             HHhcCCCCCCCCCCCCC-CHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRW-SSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~-s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      |....+..|     ..+ +.++++|+.+||..||.+|+++.++++
T Consensus       235 i~~~~~~~p-----~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  235 IRKGEFKIP-----SYLLSPEARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             HhcCCccCC-----CCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence            777766655     445 999999999999999999999999999

>KOG0696|consensus

Probab=100.00  E-value=8.1e-41  Score=286.03  Aligned_cols=250  Identities=24%  Similarity=0.252  Sum_probs=199.5

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      |.++.-|+    +|+||||+.||+|- .-+++-+   .+-|..+.+++.+|+-||.|||++||++||||.    ++..|+
T Consensus       413 ~qlHScFQTmDRLyFVMEyvnGGDLM-yhiQQ~G---kFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGH  488 (683)
T KOG0696|consen  413 VQLHSCFQTMDRLYFVMEYVNGGDLM-YHIQQVG---KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGH  488 (683)
T ss_pred             HHHHHHhhhhhheeeEEEEecCchhh-hHHHHhc---ccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCc
Confidence            44555566    59999999999999 7777777   899999999999999999999999999999999    999999


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      |||+|||.++...-......++|||+.|+|||++.   ...|+.++||||+||+||||+.|++||.+.+..+....|...
T Consensus       489 iKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~---YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh  565 (683)
T KOG0696|consen  489 IKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIA---YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH  565 (683)
T ss_pred             eEeeecccccccccCCcceeeecCCCcccccceEE---ecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc
Confidence            99999999988766656677899999999999996   889999999999999999999999999999999999888876


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHHH
Q psy3574         154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAI  233 (302)
Q Consensus       154 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~~  233 (302)
                      ....     +..+|.++.++++..|.++|.+|..+                     +..+-.+|+.||||+..+|.....
T Consensus       566 nvsy-----PKslSkEAv~ickg~ltK~P~kRLGc---------------------g~~ge~di~~H~FFR~iDWek~E~  619 (683)
T KOG0696|consen  566 NVSY-----PKSLSKEAVAICKGLLTKHPGKRLGC---------------------GPEGERDIREHPFFRRIDWEKLER  619 (683)
T ss_pred             cCcC-----cccccHHHHHHHHHHhhcCCccccCC---------------------CCccccchhhCcchhhccHHHHhh
Confidence            5444     46789999999999999999999876                     556678999999999888877766


Q ss_pred             HHhhhcCCCCCCCCCCCCCCCCCCCCcchhHHHHhhhhhcccCCCCCCCCccccc
Q psy3574         234 ELLQKVSNPPTTYTDLEPDDDGEIPNVPQRIQSRLLTARNNHARNPNIDESEVFS  288 (302)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (302)
                      ..+++...|..    ....+.++++...................|-+++++++||
T Consensus       620 ~eiqPPfkPk~----k~~r~~eNFD~~Ft~~~~~lTPpD~~v~~nldq~eF~gFs  670 (683)
T KOG0696|consen  620 REIQPPFKPKI----KCGRDAENFDKFFTREPTDLTPPDKLVMMNLDQSEFEGFS  670 (683)
T ss_pred             ccCCCCCCCcc----ccCCchhhhhHHHhcCCCCCCCchHHHHhcCchhhcCcee
Confidence            55554433322    2222333333333333333333333344555666666655

>KOG0579|consensus

Probab=100.00  E-value=1.2e-40  Score=297.72  Aligned_cols=208  Identities=39%  Similarity=0.669  Sum_probs=184.9

Q ss_pred             Cchhhhcchh----eeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFLQ----VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~~----~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|++    ||++|||.||.+..-++..+.   +|.+.++..+++|++.||+|||+++|||||||.    +.-+|
T Consensus        91 ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r---~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldG  167 (1187)
T KOG0579|consen   91 IVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGR---VLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDG  167 (1187)
T ss_pred             HHHHHHHHhccCceEEEEeecCCchHhHHHHHhcc---ccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecC
Confidence            5888888884    999999999999955666555   899999999999999999999999999999999    77899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhccccc--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      .|+|+|||.+...........+++||+.|||||+.+|.  ...+|++++||||||+.|.+|..+.+|-...++...+.+|
T Consensus       168 dirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKi  247 (1187)
T KOG0579|consen  168 DIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI  247 (1187)
T ss_pred             cEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHH
Confidence            99999999987766655667789999999999999875  4578999999999999999999999999999999988888


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKR  230 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~  230 (302)
                      ...  .||.+..+.+++..+.||+++||.+||..||++.++|+                          ||||.+..+..
T Consensus       248 aKS--ePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~--------------------------Hpfv~~~~SnK  299 (1187)
T KOG0579|consen  248 AKS--EPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK--------------------------HPFVQNAPSNK  299 (1187)
T ss_pred             hhc--CCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh--------------------------CcccccCCcch
Confidence            776  57778888999999999999999999999999999999                          99999877766


Q ss_pred             HHHHHhhhc
Q psy3574         231 VAIELLQKV  239 (302)
Q Consensus       231 ~~~~~~~~~  239 (302)
                      ...+++...
T Consensus       300 ~ireLlAEa  308 (1187)
T KOG0579|consen  300 MIRELLAEA  308 (1187)
T ss_pred             HHHHHHHHH
Confidence            665555544

>KOG0591|consensus

Probab=100.00  E-value=8e-41  Score=273.27  Aligned_cols=186  Identities=21%  Similarity=0.390  Sum_probs=163.8

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHh--CC--CCCCCCcC--
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSK--SG--FKPPALKD--   67 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~--~~--i~Hrdlkp--   67 (302)
                      ||+||++.+      ++||||||.+|+|. .+++. +..+..++|..++.++.|++.||..||+  ..  |+||||||  
T Consensus        80 IVqYy~~~f~~~~evlnivmE~c~~GDLs-qmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaN  158 (375)
T KOG0591|consen   80 IVQYYAHSFIEDNEVLNIVMELCDAGDLS-QMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPAN  158 (375)
T ss_pred             HHHHHHHhhhccchhhHHHHHhhcccCHH-HHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchh
Confidence            689999655      58999999999999 77754 3334579999999999999999999999  44  99999999  


Q ss_pred             --CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          68 --KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        68 --~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                        ++.+|.+||+|||+++.+.....-..+++|||.||+||.+.   ..+|+.++||||+||++|||+.-++||.+.+-..
T Consensus       159 IFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~---~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~  235 (375)
T KOG0591|consen  159 IFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIH---ESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLS  235 (375)
T ss_pred             eEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHh---cCCCCcchhHHHHHHHHHHHHhcCCCcccccHHH
Confidence              99999999999999999988766778899999999999996   8889999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...+|.+..+.+..   ...+|..+..+|..|+..||..||+.-.++.
T Consensus       236 L~~KI~qgd~~~~p---~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~  280 (375)
T KOG0591|consen  236 LCKKIEQGDYPPLP---DEHYSTDLRELINMCIAVDPEQRPDTVPYVQ  280 (375)
T ss_pred             HHHHHHcCCCCCCc---HHHhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence            99999988654331   1568999999999999999999999655544

>KOG0661|consensus

Probab=100.00  E-value=2.5e-40  Score=287.27  Aligned_cols=178  Identities=24%  Similarity=0.304  Sum_probs=156.2

Q ss_pred             hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      .+|+|||||+. +|+ ++++.+.  +.|++..++.|++||+.||+|+|++|+.|||+||    +.....|||+|||+|+.
T Consensus        84 ~L~fVfE~Md~-NLY-qLmK~R~--r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARe  159 (538)
T KOG0661|consen   84 ILYFVFEFMDC-NLY-QLMKDRN--RLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLARE  159 (538)
T ss_pred             eEeeeHHhhhh-hHH-HHHhhcC--CcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccc
Confidence            47999999988 999 7887763  5899999999999999999999999999999999    55578899999999998


Q ss_pred             cccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCC--
Q psy3574          85 ITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD--  162 (302)
Q Consensus        85 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~--  162 (302)
                      +... ...+.++.|++|+|||+++  +...|+.++|+||+|||++|+.+-++.|.|.+..+.+.+|...-..|.....  
T Consensus       160 v~Sk-pPYTeYVSTRWYRAPEvLL--rs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~e  236 (538)
T KOG0661|consen  160 VRSK-PPYTEYVSTRWYRAPEVLL--RSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPE  236 (538)
T ss_pred             cccC-CCcchhhhcccccchHHhh--hccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchh
Confidence            8765 5567789999999999998  6788999999999999999999999999999999999999884333322111  


Q ss_pred             -----------------------CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         163 -----------------------KDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       163 -----------------------~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                             ...++.++.++|.+||.+||.+|||+.++|+
T Consensus       237 g~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~  290 (538)
T KOG0661|consen  237 GYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ  290 (538)
T ss_pred             HHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence                                   1246899999999999999999999999999

>KOG0599|consensus

Probab=100.00  E-value=1.1e-40  Score=271.61  Aligned_cols=180  Identities=21%  Similarity=0.320  Sum_probs=163.7

Q ss_pred             chheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccc
Q psy3574           8 FLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSA   83 (302)
Q Consensus         8 ~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~   83 (302)
                      .|+++|+|.|+.|.|+ +++....   .++|+..+.|++|++.|+.|||.++|+|||+||    ++++.+|||+|||+|+
T Consensus        96 sF~FlVFdl~prGELF-DyLts~V---tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~  171 (411)
T KOG0599|consen   96 AFVFLVFDLMPRGELF-DYLTSKV---TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFAC  171 (411)
T ss_pred             chhhhhhhhcccchHH-HHhhhhe---eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceee
Confidence            3468999999999999 9999888   899999999999999999999999999999999    8899999999999999


Q ss_pred             ccccccccccccccCcccchhhccccc---ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCC
Q psy3574          84 QITATINKRKSFIGTPYWMAPEVAAVE---RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL  160 (302)
Q Consensus        84 ~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  160 (302)
                      .+..+ ......|||++|+|||.+.++   ...+|+..+|+||+||++|.++.|.+||......-++..|..+.+.... 
T Consensus       172 ~l~~G-ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~s-  249 (411)
T KOG0599|consen  172 QLEPG-EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRS-  249 (411)
T ss_pred             ccCCc-hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCC-
Confidence            99876 556778999999999999753   4567999999999999999999999999988888888888887766543 


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         161 KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       161 ~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.+..++.+++|||.+||+.||.+|+|++++|.
T Consensus       250 peWadis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  250 PEWADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             cchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence            346788999999999999999999999999999

>KOG0595|consensus

Probab=100.00  E-value=5.3e-40  Score=280.79  Aligned_cols=184  Identities=22%  Similarity=0.337  Sum_probs=159.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC--
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR--   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~--   70 (302)
                      ||++++...    .|+|||||.||+|. +++++.+   .++|..++.++.||+.||++||+++|+||||||    +..  
T Consensus        71 IV~l~d~~~~~~~i~lVMEyC~gGDLs-~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~  146 (429)
T KOG0595|consen   71 IVRLLDCIEDDDFIYLVMEYCNGGDLS-DYIRRRG---RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTA  146 (429)
T ss_pred             eeeEEEEEecCCeEEEEEEeCCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCC
Confidence            456666544    58999999999999 8888887   899999999999999999999999999999999    222  


Q ss_pred             -C---CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH
Q psy3574          71 -C---GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRA  146 (302)
Q Consensus        71 -~---~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  146 (302)
                       .   ..+||+|||+|+.+... ....+.||++.|||||+++   .+.|+.++|+||+|+++|+|++|++||...+..+.
T Consensus       147 ~~~~~~~LKIADFGfAR~L~~~-~~a~tlcGSplYMAPEV~~---~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL  222 (429)
T KOG0595|consen  147 RNDTSPVLKIADFGFARFLQPG-SMAETLCGSPLYMAPEVIM---SQQYDAKADLWSIGTILYQCLTGKPPFDAETPKEL  222 (429)
T ss_pred             CCCCCceEEecccchhhhCCch-hHHHHhhCCccccCHHHHH---hccccchhhHHHHHHHHHHHHhCCCCccccCHHHH
Confidence             1   57899999999988864 4556789999999999996   78899999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         147 LFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       147 ~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      +..+.+.....+..  +..++....+++...|..++..|.+..+-+.+
T Consensus       223 ~~~~~k~~~~~~~~--~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~  268 (429)
T KOG0595|consen  223 LLYIKKGNEIVPVL--PAELSNPLRELLISLLQRNPKDRISFEDFFDH  268 (429)
T ss_pred             HHHHhccccccCch--hhhccCchhhhhhHHHhcCccccCchHHhhhh
Confidence            88777766554443  35567888899999999999999999999883

>KOG0593|consensus

Probab=100.00  E-value=4.3e-40  Score=271.44  Aligned_cols=178  Identities=20%  Similarity=0.309  Sum_probs=153.6

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .++|+|||+. ++.+.+-....   .++++.++.+++|++.|+.|||+++++||||||    +..+|.+||||||+|+.+
T Consensus        76 lhLVFE~~dh-TvL~eLe~~p~---G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L  151 (396)
T KOG0593|consen   76 LHLVFEYCDH-TVLHELERYPN---GVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTL  151 (396)
T ss_pred             eEEEeeecch-HHHHHHHhccC---CCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhh
Confidence            5899999999 55526666555   799999999999999999999999999999999    899999999999999999


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC-----------
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG-----------  154 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----------  154 (302)
                      .......+.++.|++|+|||.+.  ....|+.++||||+||++.||++|.+.|.+....++++.|...-           
T Consensus       152 ~~pgd~YTDYVATRWYRaPELLv--GDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF  229 (396)
T KOG0593|consen  152 SAPGDNYTDYVATRWYRAPELLV--GDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIF  229 (396)
T ss_pred             cCCcchhhhhhhhhhccChhhhc--ccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHh
Confidence            87667778889999999999998  35779999999999999999999999999999999999887721           


Q ss_pred             --------CCCCCCC-------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         155 --------FKPPALK-------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       155 --------~~~~~~~-------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                              ...|...       ....++.-+.||+++||..||.+|++.+++|.
T Consensus       230 ~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  230 SSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             ccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence                    1111111       12345778999999999999999999999999

>KOG0610|consensus

Probab=100.00  E-value=1.2e-39  Score=278.94  Aligned_cols=198  Identities=22%  Similarity=0.289  Sum_probs=167.8

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ...|.+|.    .|+|||||+||+|. .+++++. +..|+++.+++++.+++.||+|||-.|||+|||||    +.++|+
T Consensus       140 PTLYa~fet~~~~cl~meyCpGGdL~-~LrqkQp-~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGH  217 (459)
T KOG0610|consen  140 PTLYASFETDKYSCLVMEYCPGGDLH-SLRQKQP-GKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGH  217 (459)
T ss_pred             chhhheeeccceeEEEEecCCCccHH-HHHhhCC-CCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCc
Confidence            45677776    59999999999999 6666554 56899999999999999999999999999999999    889999


Q ss_pred             EEEecccccccccc---------------------------------c-c----------------------cccccccc
Q psy3574          74 VKLADFGVSAQITA---------------------------------T-I----------------------NKRKSFIG   97 (302)
Q Consensus        74 ikL~DFg~a~~~~~---------------------------------~-~----------------------~~~~~~~g   97 (302)
                      |.|+||.++.....                                 . .                      .....++|
T Consensus       218 IMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVG  297 (459)
T KOG0610|consen  218 IMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVG  297 (459)
T ss_pred             EEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccc
Confidence            99999988753210                                 0 0                      11235789


Q ss_pred             CcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHh
Q psy3574          98 TPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIA  177 (302)
Q Consensus        98 t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~  177 (302)
                      |-.|+|||++.   +.+++.++|||+||+++|||+.|..||.+.+..+.+.+|.......|..   ..++..++|||+++
T Consensus       298 ThEYlAPEvI~---G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~---~~vs~~akDLIr~L  371 (459)
T KOG0610|consen  298 THEYLAPEVIR---GEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEE---PEVSSAAKDLIRKL  371 (459)
T ss_pred             ccccccceeee---cCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCC---CcchhHHHHHHHHH
Confidence            99999999995   8889999999999999999999999999999999999999876665543   36789999999999


Q ss_pred             hhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhh
Q psy3574         178 LTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSK  229 (302)
Q Consensus       178 L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~  229 (302)
                      |.+||.+|+..                      ..|+.|||.||||++..|.
T Consensus       372 LvKdP~kRlg~----------------------~rGA~eIK~HpFF~gVnWa  401 (459)
T KOG0610|consen  372 LVKDPSKRLGS----------------------KRGAAEIKRHPFFEGVNWA  401 (459)
T ss_pred             hccChhhhhcc----------------------ccchHHhhcCccccCCChh
Confidence            99999999863                      3466777889999988775

>KOG0198|consensus

Probab=100.00  E-value=2.7e-40  Score=283.46  Aligned_cols=185  Identities=27%  Similarity=0.418  Sum_probs=152.6

Q ss_pred             Cchhhhc------chheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNH------FLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~------~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      ||+|||.      -.++|.|||++||+|. +++...+ + +|+|..++.+.+||+.||+|||++||+||||||    ++.
T Consensus        76 IV~~~G~~~~~~~~~~~i~mEy~~~GsL~-~~~~~~g-~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~  152 (313)
T KOG0198|consen   76 IVQYYGSSSSRENDEYNIFMEYAPGGSLS-DLIKRYG-G-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDP  152 (313)
T ss_pred             EEeeCCccccccCeeeEeeeeccCCCcHH-HHHHHcC-C-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeC
Confidence            6888885      1378999999999999 6666654 1 699999999999999999999999999999999    666


Q ss_pred             -CCCEEEeccccccccccc---cccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCC-CChHH
Q psy3574          71 -CGDVKLADFGVSAQITAT---INKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFD-LHPMR  145 (302)
Q Consensus        71 -~~~ikL~DFg~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~-~~~~~  145 (302)
                       +|.+||+|||+++.....   ........||+.|||||++..  +.....++|||||||++.||+||++||.. .....
T Consensus       153 ~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~--g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~  230 (313)
T KOG0198|consen  153 SNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRN--GEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAE  230 (313)
T ss_pred             CCCeEEeccCccccccccccccccccccccCCccccCchhhcC--CCcCCccchhhhcCCEEEeccCCCCcchhhcchHH
Confidence             699999999999877631   122345789999999999962  22223599999999999999999999987 45555


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+..+......|   ..+..++.++++||.+||..+|++|||+.++|+
T Consensus       231 ~~~~ig~~~~~P---~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~  275 (313)
T KOG0198|consen  231 ALLLIGREDSLP---EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLE  275 (313)
T ss_pred             HHHHHhccCCCC---CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence            555665555333   446779999999999999999999999999999

>KOG0201|consensus

Probab=100.00  E-value=6.8e-41  Score=288.40  Aligned_cols=183  Identities=42%  Similarity=0.722  Sum_probs=163.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |.+||+.+.    +|++||||.||++. ++++.+.   .+.|..+..++++++.||.|||.++.+|||||+    +...|
T Consensus        73 it~yygsyl~g~~LwiiMey~~gGsv~-~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g  148 (467)
T KOG0201|consen   73 ITEYYGSYLKGTKLWIIMEYCGGGSVL-DLLKSGN---ILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESG  148 (467)
T ss_pred             HHhhhhheeecccHHHHHHHhcCcchh-hhhccCC---CCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccC
Confidence            347888766    69999999999999 9999888   679999999999999999999999999999999    66679


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||.+..+........+++||+.|||||++.   ..+|+.++||||||++.+||++|.+|+....+...+..|-+
T Consensus       149 ~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~---~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk  225 (467)
T KOG0201|consen  149 DVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIK---QSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPK  225 (467)
T ss_pred             cEEEEecceeeeeechhhccccccccccccchhhhc---cccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccC
Confidence            999999999999988777778999999999999996   77899999999999999999999999999988776666655


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      .  .||.+..  .+++.+++|+..||++||+.||++.++|++
T Consensus       226 ~--~PP~L~~--~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  226 S--APPRLDG--DFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             C--CCCcccc--ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            4  4555433  789999999999999999999999999993

>KOG0690|consensus

Probab=100.00  E-value=8.5e-40  Score=272.26  Aligned_cols=200  Identities=23%  Similarity=0.297  Sum_probs=172.8

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      +|+||||+.||.|+ .-+.+..   .++|...+++-.+|+.||.|||+++|+.||+|.    ++++|+|||+|||+++..
T Consensus       243 lCFVMeyanGGeLf-~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~  318 (516)
T KOG0690|consen  243 LCFVMEYANGGELF-FHLSRER---VFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE  318 (516)
T ss_pred             EEEEEEEccCceEe-eehhhhh---cccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhc
Confidence            69999999999999 6666655   799999999999999999999999999999999    999999999999999987


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR  165 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  165 (302)
                      ........++|||+.|+|||++-   ...|+.++|||.+||++|||+||++||...+....+..|.......     +..
T Consensus       319 I~~g~t~kTFCGTPEYLAPEVle---DnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kF-----Pr~  390 (516)
T KOG0690|consen  319 IKYGDTTKTFCGTPEYLAPEVLE---DNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKF-----PRT  390 (516)
T ss_pred             ccccceeccccCChhhcCchhhc---cccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccC-----Ccc
Confidence            77667778999999999999995   7789999999999999999999999999999888888887765544     477


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHHHHHhhhcCCC
Q psy3574         166 WSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNP  242 (302)
Q Consensus       166 ~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~~~~~  242 (302)
                      ++++++.|+..+|.+||.+|..                     |+...+.||..|+||.+..|.......+.+...|
T Consensus       391 ls~eAktLLsGLL~kdP~kRLG---------------------gGpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKP  446 (516)
T KOG0690|consen  391 LSPEAKTLLSGLLKKDPKKRLG---------------------GGPDDAKEIMRHRFFASVDWEATYRKKIEPPFKP  446 (516)
T ss_pred             CCHHHHHHHHHHhhcChHhhcC---------------------CCchhHHHHHhhhhhccCCHHHHHHhccCCCCCC
Confidence            8999999999999999999975                     2334444455599999998887765554444333

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=3e-39  Score=285.27  Aligned_cols=194  Identities=21%  Similarity=0.299  Sum_probs=162.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.|.    .|+||||++||+|. .++....   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        57 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~  132 (323)
T cd05571          57 LTALKYSFQTHDRLCFVMEYANGGELF-FHLSRER---VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDG  132 (323)
T ss_pred             CCCEEEEEEcCCEEEEEEeCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC
Confidence            345555444    58999999999999 7776666   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+++............+||+.|+|||++.   +..++.++||||+||++|+|++|..||...+.......+..
T Consensus       133 ~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~  209 (323)
T cd05571         133 HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM  209 (323)
T ss_pred             CEEEeeCCCCcccccCCCcccceecCccccChhhhc---CCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHc
Confidence            999999999876443333344567999999999995   66789999999999999999999999988777766666655


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      ....     .+..++.++.+||.+||..||++||     ++.++++                          ||||....
T Consensus       210 ~~~~-----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~--------------------------h~~f~~~~  258 (323)
T cd05571         210 EEIR-----FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME--------------------------HRFFASIN  258 (323)
T ss_pred             CCCC-----CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc--------------------------CCCcCCCC
Confidence            4332     2356899999999999999999999     8999999                          99999876


Q ss_pred             hhHHH
Q psy3574         228 SKRVA  232 (302)
Q Consensus       228 ~~~~~  232 (302)
                      +....
T Consensus       259 ~~~~~  263 (323)
T cd05571         259 WQDVV  263 (323)
T ss_pred             HHHHH
Confidence            65443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0574|consensus

Probab=100.00  E-value=1.2e-40  Score=274.93  Aligned_cols=203  Identities=35%  Similarity=0.617  Sum_probs=181.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      +|||||..|    +|||||||..|++. ++++.+.  ++|+|+++..+++..+.||.|||...-+|||||.    ++.+|
T Consensus        90 VVKYYGSYFK~sDLWIVMEYCGAGSiS-DI~R~R~--K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G  166 (502)
T KOG0574|consen   90 VVKYYGSYFKHSDLWIVMEYCGAGSIS-DIMRARR--KPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDG  166 (502)
T ss_pred             hhhhhhhhccCCceEeehhhcCCCcHH-HHHHHhc--CCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccc
Confidence            689999888    69999999999999 7777654  5899999999999999999999999999999999    88999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      +.||+|||.|..+.+.....++.+||+.|||||++.   .-+|+..+||||||+...||..|++||.+..+...+..|-.
T Consensus       167 ~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~---EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT  243 (502)
T KOG0574|consen  167 IAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIE---EIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPT  243 (502)
T ss_pred             hhhhhhccccchhhhhHHhhCccccCcccccHHHHH---HhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccC
Confidence            999999999999998888888999999999999996   77899999999999999999999999999888887766654


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVA  232 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~  232 (302)
                      .  ++|.+..+..+|.++.||+++||.++|++|.|+.++++                          |||.++.....+.
T Consensus       244 ~--PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~--------------------------H~FiknA~g~~I~  295 (502)
T KOG0574|consen  244 K--PPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE--------------------------HTFIKNAPGCDIM  295 (502)
T ss_pred             C--CCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh--------------------------hhhhcCCCcccHH
Confidence            3  56677778889999999999999999999999999999                          9999876655554


Q ss_pred             HHHhh
Q psy3574         233 IELLQ  237 (302)
Q Consensus       233 ~~~~~  237 (302)
                      ..+++
T Consensus       296 ~~~I~  300 (502)
T KOG0574|consen  296 QLMIQ  300 (502)
T ss_pred             HHHHH
Confidence            44443

>KOG0986|consensus

Probab=100.00  E-value=9.4e-40  Score=282.15  Aligned_cols=250  Identities=19%  Similarity=0.251  Sum_probs=195.4

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      +|+||..|+||+|.-++++.+.  ..|+|..+++++.+|+.||.+||..+||+||+||    +|+.|+++|+|+|+|..+
T Consensus       260 LClVLtlMNGGDLkfHiyn~g~--~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei  337 (591)
T KOG0986|consen  260 LCLVLTLMNGGDLKFHIYNHGN--PGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEI  337 (591)
T ss_pred             eEEEEEeecCCceeEEeeccCC--CCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEec
Confidence            5999999999999967777664  4699999999999999999999999999999999    999999999999999988


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR  165 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  165 (302)
                      ... ......+||.+|||||++.   ...|+..+|||||||++|+|+.|+.||...........+.+.... .....+..
T Consensus       338 ~~g-~~~~~rvGT~GYMAPEvl~---ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~-~~~ey~~k  412 (591)
T KOG0986|consen  338 PEG-KPIRGRVGTVGYMAPEVLQ---NEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE-DPEEYSDK  412 (591)
T ss_pred             CCC-CccccccCcccccCHHHHc---CCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc-chhhcccc
Confidence            776 3445569999999999997   555999999999999999999999999876555444333333222 22344588


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHHHHHhhhcCCCCCC
Q psy3574         166 WSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTT  245 (302)
Q Consensus       166 ~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~~~~~~~~  245 (302)
                      +|++++++++.+|.+||.+|..+.                     -.+..+++.||||++..|+.+....+.+...|++.
T Consensus       413 FS~eakslc~~LL~Kdp~~RLGcr---------------------g~ga~evk~HpfFk~lnw~rleagml~PPfiPdp~  471 (591)
T KOG0986|consen  413 FSEEAKSLCEGLLTKDPEKRLGCR---------------------GEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDPG  471 (591)
T ss_pred             cCHHHHHHHHHHHccCHHHhccCC---------------------CcCcchhhhCcccccCCHhHHhccCCCCCCCCCcc
Confidence            999999999999999999998763                     24778889999999999998887766665555333


Q ss_pred             CC-CCCCCCCCCCCCcchhHHHHhhhhhcccCCCCCCCCcccccCCCCCCCCCC
Q psy3574         246 YT-DLEPDDDGEIPNVPQRIQSRLLTARNNHARNPNIDESEVFSLPDVSAPWNS  298 (302)
Q Consensus       246 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (302)
                      .. ..|-.|.++++        +..   .-.....+.+....|.+..+|+||..
T Consensus       472 aVyakDv~DIeqFs--------~VK---GV~ld~~D~~fy~~F~tg~vsipWQn  514 (591)
T KOG0986|consen  472 AVYAKDVLDIEQFS--------TVK---GVKLDDTDTDFYKNFATGSVSIPWQN  514 (591)
T ss_pred             ccchhhhhhhhhcc--------ccc---ceecccccHHHHHhccCCcccchHHH
Confidence            22 23333333333        222   22223335567788999999999974

>KOG0582|consensus

Probab=100.00  E-value=5.7e-39  Score=276.98  Aligned_cols=190  Identities=33%  Similarity=0.493  Sum_probs=162.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||+||-.|.    +|+||.||.+|++. ++++..- ...|+|..|..|++++++||.|||.+|.||||||+    ++.+|
T Consensus        86 Iv~~~~sFvv~~~LWvVmpfMa~GS~l-dIik~~~-~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG  163 (516)
T KOG0582|consen   86 IVTYHCSFVVDSELWVVMPFMAGGSLL-DIIKTYY-PDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDG  163 (516)
T ss_pred             cceEEEEEEecceeEEeehhhcCCcHH-HHHHHHc-cccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCC
Confidence            678888888    49999999999999 8888754 23699999999999999999999999999999999    99999


Q ss_pred             CEEEecccccccccccccc----ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q psy3574          73 DVKLADFGVSAQITATINK----RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF  148 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  148 (302)
                      .|||+|||.+..+......    ..+++||+.|||||+++. ...+|+.++||||||++..||++|..||....+...+.
T Consensus       164 ~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q-~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl  242 (516)
T KOG0582|consen  164 TVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQ-QLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLL  242 (516)
T ss_pred             cEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhh-cccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHH
Confidence            9999999988766543332    256789999999999643 46789999999999999999999999999999999888


Q ss_pred             HHHhcCCCCCC-----CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPA-----LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~-----~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...++..+.+.     ......++..++.+|..||++||.+|||++++|+
T Consensus       243 ~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  243 LTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             HHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            77776543222     1123356788999999999999999999999999

>KOG0597|consensus

Probab=100.00  E-value=9.3e-39  Score=282.50  Aligned_cols=180  Identities=27%  Similarity=0.417  Sum_probs=164.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||.|+++|.    +|+|+|||.| +|. .++...+   .++|+.++.++.+++.||.|||+++|+|||+||    +...|
T Consensus        63 iv~m~esfEt~~~~~vVte~a~g-~L~-~il~~d~---~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~  137 (808)
T KOG0597|consen   63 IVEMLESFETSAHLWVVTEYAVG-DLF-TILEQDG---KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGG  137 (808)
T ss_pred             hhhHHHhhcccceEEEEehhhhh-hHH-HHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCC
Confidence            678888888    5999999998 999 9999888   899999999999999999999999999999999    99999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++|+||||+|+.+...........||+.|||||++.   +..|+..+|+|||||++|||+.|++||....-......|..
T Consensus       138 ~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~---e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~  214 (808)
T KOG0597|consen  138 TLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVE---EQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILK  214 (808)
T ss_pred             ceeechhhhhhhcccCceeeeeccCcccccCHHHHc---CCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc
Confidence            999999999998877656666778999999999995   88899999999999999999999999998887777777777


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+|     ...+..+.+|+..+|.+||..|+++.+++.
T Consensus       215 d~v~~p-----~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  215 DPVKPP-----STASSSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             CCCCCc-----ccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence            554443     578999999999999999999999999999

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=2.1e-38  Score=279.53  Aligned_cols=193  Identities=23%  Similarity=0.300  Sum_probs=161.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    .|+||||++||+|. .++....   .+++..++.++.|++.||.|||++||+||||||    ++.++
T Consensus        58 iv~~~~~~~~~~~~~iv~Ey~~~g~L~-~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~  133 (320)
T cd05590          58 LTQLYCCFQTPDRLFFVMEFVNGGDLM-FHIQKSR---RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG  133 (320)
T ss_pred             hhceeeEEEcCCEEEEEEcCCCCchHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC
Confidence            456666554    58999999999999 7777666   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+++............+|++.|+|||++.   +..++.++||||+||++|+|++|+.||.+.+.......+..
T Consensus       134 ~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~  210 (320)
T cd05590         134 HCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQ---EMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN  210 (320)
T ss_pred             cEEEeeCCCCeecCcCCCcccccccCccccCHHHHc---CCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc
Confidence            999999999876433323334567999999999985   66688999999999999999999999998888777777665


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH------HHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccc
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA------DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYD  226 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~------~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~  226 (302)
                      .....     +..++.++.+||++||+.||.+|+++      +++++                          ||||...
T Consensus       211 ~~~~~-----~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~--------------------------h~~f~~~  259 (320)
T cd05590         211 DEVVY-----PTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILR--------------------------HPFFKEL  259 (320)
T ss_pred             CCCCC-----CCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHc--------------------------CCCcCCC
Confidence            44322     34578999999999999999999998      77777                          9999876


Q ss_pred             hhhHH
Q psy3574         227 MSKRV  231 (302)
Q Consensus       227 ~~~~~  231 (302)
                      .+...
T Consensus       260 ~~~~~  264 (320)
T cd05590         260 DWEKL  264 (320)
T ss_pred             CHHHH
Confidence            65543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0612|consensus

Probab=100.00  E-value=4e-38  Score=296.87  Aligned_cols=211  Identities=22%  Similarity=0.322  Sum_probs=171.6

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      +|+||||++||+|. .++...+   +++|+++++|+..|+.||.-+|+.|+|||||||    ++..|+|||+|||.+-.+
T Consensus       150 LYlVMdY~pGGDll-tLlSk~~---~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm  225 (1317)
T KOG0612|consen  150 LYLVMDYMPGGDLL-TLLSKFD---RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKM  225 (1317)
T ss_pred             eEEEEecccCchHH-HHHhhcC---CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhc
Confidence            69999999999999 8888877   899999999999999999999999999999999    999999999999999887


Q ss_pred             cc-ccccccccccCcccchhhcccccc-c-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--CCCCCCC
Q psy3574          86 TA-TINKRKSFIGTPYWMAPEVAAVER-K-GGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS--GFKPPAL  160 (302)
Q Consensus        86 ~~-~~~~~~~~~gt~~y~aPE~~~~~~-~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~~~~~~  160 (302)
                      .. +.......+|||.|++||++.... + +.|+..+||||+||++|||+.|..||....-.+...+|..-  .+.+|  
T Consensus       226 ~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP--  303 (1317)
T KOG0612|consen  226 DADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFP--  303 (1317)
T ss_pred             CCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCC--
Confidence            74 334456679999999999997432 2 56899999999999999999999999999888888888765  33333  


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHHHHHhhhcC
Q psy3574         161 KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVS  240 (302)
Q Consensus       161 ~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~~~  240 (302)
                       ....+|.++++||.+++. +|+.|..                       ..|.+||++||||.++.|..+..      .
T Consensus       304 -~~~~VSeeakdLI~~ll~-~~e~RLg-----------------------rngiedik~HpFF~g~~W~~iR~------~  352 (1317)
T KOG0612|consen  304 -DETDVSEEAKDLIEALLC-DREVRLG-----------------------RNGIEDIKNHPFFEGIDWDNIRE------S  352 (1317)
T ss_pred             -cccccCHHHHHHHHHHhc-Chhhhcc-----------------------cccHHHHHhCccccCCChhhhhh------c
Confidence             124489999999999876 5777875                       45556666699999999955432      3


Q ss_pred             CCCCCCCCCCCCCCCCC
Q psy3574         241 NPPTTYTDLEPDDDGEI  257 (302)
Q Consensus       241 ~~~~~~~~~~~~~~~~~  257 (302)
                      .||..++-..++|...+
T Consensus       353 ~pP~vPevssd~DTsnF  369 (1317)
T KOG0612|consen  353 VPPVVPEVSSDDDTSNF  369 (1317)
T ss_pred             CCCCCCcCCCCCccccc
Confidence            35555555444444444

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=7.7e-38  Score=276.06  Aligned_cols=193  Identities=25%  Similarity=0.290  Sum_probs=163.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.|.    .|+||||++||+|. ..+....   .+++..++.++.||+.||.|||++||+||||||    ++.++
T Consensus        58 i~~~~~~~~~~~~~~lv~E~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~  133 (321)
T cd05591          58 LTALHCCFQTKDRLFFVMEYVNGGDLM-FQIQRSR---KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG  133 (321)
T ss_pred             ccceeeEEEcCCeEEEEEeCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence            456666665    58999999999999 6776665   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++.............+|++.|+|||++.   ...++.++|||||||++|+|++|+.||...+.......+..
T Consensus       134 ~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~  210 (321)
T cd05591         134 HCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQ---ELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILH  210 (321)
T ss_pred             CEEEeecccceecccCCccccccccCccccCHHHHc---CCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            999999999876543333344567999999999985   66789999999999999999999999998888887777766


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-------CHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCcccc
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-------TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKY  225 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-------t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~  225 (302)
                      .....     +..++.++.++|.+||..||++|+       ++.++++                          ||||..
T Consensus       211 ~~~~~-----p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~--------------------------hp~~~~  259 (321)
T cd05591         211 DDVLY-----PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ--------------------------HPFFKE  259 (321)
T ss_pred             CCCCC-----CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc--------------------------CCccCC
Confidence            54332     245789999999999999999999       8888998                          999988


Q ss_pred             chhhHH
Q psy3574         226 DMSKRV  231 (302)
Q Consensus       226 ~~~~~~  231 (302)
                      ..|...
T Consensus       260 ~~~~~~  265 (321)
T cd05591         260 IDWVLL  265 (321)
T ss_pred             CCHHHH
Confidence            776544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=1e-37  Score=274.97  Aligned_cols=192  Identities=22%  Similarity=0.291  Sum_probs=161.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    +|+||||++||+|. ..+...+   .+++..+..++.||+.||+|||++||+||||||    ++.++
T Consensus        58 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~  133 (318)
T cd05570          58 LTQLHSCFQTKDRLFFVMEYVNGGDLM-FHIQRSG---RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEG  133 (318)
T ss_pred             ccceeeEEEcCCEEEEEEcCCCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCC
Confidence            466776554    69999999999999 7777666   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++.............+|+..|+|||++.   +..++.++|+||+||++|+|++|+.||.+.+.......+..
T Consensus       134 ~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~  210 (318)
T cd05570         134 HIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILS---YQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILE  210 (318)
T ss_pred             cEEecccCCCeecCcCCCcccceecCccccCHHHhc---CCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHc
Confidence            999999999875433323334557899999999995   66789999999999999999999999988877766666655


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH-----HHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA-----DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~-----~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      ....     .+..++..+.+||.+||..||.+||++     .++++                          ||||+...
T Consensus       211 ~~~~-----~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~--------------------------~~~~~~~~  259 (318)
T cd05570         211 DEVR-----YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG--------------------------HPFFREID  259 (318)
T ss_pred             CCCC-----CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc--------------------------CCCcCCCC
Confidence            4332     235678999999999999999999999     99999                          99998766


Q ss_pred             hhH
Q psy3574         228 SKR  230 (302)
Q Consensus       228 ~~~  230 (302)
                      +..
T Consensus       260 ~~~  262 (318)
T cd05570         260 WDK  262 (318)
T ss_pred             HHH
Confidence            543

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=5.8e-38  Score=277.03  Aligned_cols=193  Identities=21%  Similarity=0.300  Sum_probs=162.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.|.    .|+||||++||+|. .++....   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        57 i~~~~~~~~~~~~~~lv~E~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  132 (323)
T cd05595          57 LTALKYAFQTHDRLCFVMEYANGGELF-FHLSRER---VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG  132 (323)
T ss_pred             CcceeeEEecCCEEEEEEeCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCC
Confidence            456666555    58999999999998 7777666   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............|++.|+|||++.   +..++.++|+|||||++|+|++|+.||...+.......+..
T Consensus       133 ~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~  209 (323)
T cd05595         133 HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM  209 (323)
T ss_pred             CEEecccHHhccccCCCCccccccCCcCcCCccccc---CCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence            999999999876433323334567999999999985   66789999999999999999999999988877776666655


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      .....     +..+++++.+||.+||+.||.+|+     ++.++++                          ||||.+..
T Consensus       210 ~~~~~-----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~--------------------------h~~~~~~~  258 (323)
T cd05595         210 EEIRF-----PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME--------------------------HRFFLSIN  258 (323)
T ss_pred             CCCCC-----CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc--------------------------CCCcCCCC
Confidence            43332     356799999999999999999998     8999999                          99999776


Q ss_pred             hhHH
Q psy3574         228 SKRV  231 (302)
Q Consensus       228 ~~~~  231 (302)
                      +...
T Consensus       259 ~~~~  262 (323)
T cd05595         259 WQDV  262 (323)
T ss_pred             HHHH
Confidence            6543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0660|consensus

Probab=100.00  E-value=1.6e-38  Score=268.28  Aligned_cols=177  Identities=20%  Similarity=0.244  Sum_probs=151.6

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      +|+|+|+|+. +|. .+++.+.   .|+++.+..+++||++||+|+|+.||+|||+||    ++.+..+||||||+|+..
T Consensus       101 vYiV~elMet-DL~-~iik~~~---~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~  175 (359)
T KOG0660|consen  101 VYLVFELMET-DLH-QIIKSQQ---DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYL  175 (359)
T ss_pred             eEEehhHHhh-HHH-HHHHcCc---cccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeec
Confidence            5999999966 999 8998887   799999999999999999999999999999999    888999999999999987


Q ss_pred             ccc--cccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC----
Q psy3574          86 TAT--INKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPA----  159 (302)
Q Consensus        86 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~----  159 (302)
                      ...  ....+.++.|.+|.|||++.  ....|+..+||||+|||+.||++|++.|.+.+...++..|...-..+..    
T Consensus       176 ~~~~~~~~mTeYVaTRWYRAPElll--~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~  253 (359)
T KOG0660|consen  176 DKFFEDGFMTEYVATRWYRAPELLL--NSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQ  253 (359)
T ss_pred             cccCcccchhcceeeeeecCHHHHh--ccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHH
Confidence            542  13346678899999999997  5677999999999999999999999999998877777766653222211    


Q ss_pred             ----------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         160 ----------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       160 ----------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                            .....+.++.+.+|+.+||..||.+|+|++++|.
T Consensus       254 ~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~  309 (359)
T KOG0660|consen  254 KIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA  309 (359)
T ss_pred             HhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence                                  1112467899999999999999999999999999

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=1e-37  Score=275.57  Aligned_cols=193  Identities=23%  Similarity=0.296  Sum_probs=160.2

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.|.    .|+||||++||+|. .++....   .+++..++.++.||+.||+|||++||+||||||    ++.+|.
T Consensus        64 ~~~~~~~~~~~~~~lv~E~~~~g~L~-~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~  139 (324)
T cd05587          64 TQLHSCFQTMDRLYFVMEYVNGGDLM-YHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGH  139 (324)
T ss_pred             eeeEEEEEcCCEEEEEEcCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCC
Confidence            44555443    58999999999999 7776666   789999999999999999999999999999999    788999


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      +||+|||++.............+||+.|+|||++.   +..++.++|+||+||++|+|++|+.||.+.+.......+...
T Consensus       140 ~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~  216 (324)
T cd05587         140 IKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIA---YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH  216 (324)
T ss_pred             EEEeecCcceecCCCCCceeeecCCccccChhhhc---CCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence            99999999875433223344567999999999996   566889999999999999999999999988877777666654


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH-----HHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchh
Q psy3574         154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA-----DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMS  228 (302)
Q Consensus       154 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~-----~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~  228 (302)
                      ...     .+..++.++.++|.+||..||.+|++.     .++++                          ||||+...+
T Consensus       217 ~~~-----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~--------------------------hp~~~~~~~  265 (324)
T cd05587         217 NVS-----YPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIRE--------------------------HAFFRRIDW  265 (324)
T ss_pred             CCC-----CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc--------------------------CCCcCCCCH
Confidence            332     235678999999999999999999986     67777                          999998776


Q ss_pred             hHHH
Q psy3574         229 KRVA  232 (302)
Q Consensus       229 ~~~~  232 (302)
                      ....
T Consensus       266 ~~~~  269 (324)
T cd05587         266 EKLE  269 (324)
T ss_pred             HHHH
Confidence            5544

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=1.1e-37  Score=274.40  Aligned_cols=193  Identities=19%  Similarity=0.259  Sum_probs=159.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.|.    .|+||||+.||+|. .++..+.   .+++.++..++.||+.||+|||++||+||||||    ++.++
T Consensus        58 i~~~~~~~~~~~~~~lv~E~~~~g~L~-~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~  133 (316)
T cd05620          58 LTHLYCTFQTKEHLFFVMEFLNGGDLM-FHIQDKG---RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDG  133 (316)
T ss_pred             ccCeeEEEEeCCEEEEEECCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC
Confidence            456666554    58999999999999 7777666   799999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+++............+|++.|+|||++.   +..++.++||||+||++|+|++|..||.+.+.......+..
T Consensus       134 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~  210 (316)
T cd05620         134 HIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQ---GLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRV  210 (316)
T ss_pred             CEEeCccCCCeecccCCCceeccCCCcCccCHHHHc---CCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            999999999875433323344567999999999996   66789999999999999999999999988877766665554


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH-HHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA-DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRV  231 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~-~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~  231 (302)
                      ....     .+..++.++++||.+||..||++|+++ +++++                          ||||+...+...
T Consensus       211 ~~~~-----~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~--------------------------h~~f~~~~~~~~  259 (316)
T cd05620         211 DTPH-----YPRWITKESKDILEKLFERDPTRRLGVVGNIRG--------------------------HPFFKTINWTAL  259 (316)
T ss_pred             CCCC-----CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc--------------------------CCCcCCCCHHHH
Confidence            3322     234578999999999999999999997 57888                          999987665533

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0614|consensus

Probab=100.00  E-value=2.5e-38  Score=276.63  Aligned_cols=204  Identities=25%  Similarity=0.326  Sum_probs=182.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |||+|..|.    +|++||-|-||.|. .+++.++   .|.+..+++++..+++|++|||++||++||+||    ++.+|
T Consensus       482 IvrLYrTfrd~kyvYmLmEaClGGElW-TiLrdRg---~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~G  557 (732)
T KOG0614|consen  482 IVRLYRTFRDSKYVYMLMEACLGGELW-TILRDRG---SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRG  557 (732)
T ss_pred             HHHHHHHhccchhhhhhHHhhcCchhh-hhhhhcC---CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCC
Confidence            688888877    59999999999999 8998888   899999999999999999999999999999999    99999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      -+||.|||+|+.+... ....++|||+.|.|||++.   .++++.++|.||||+++|||++|.+||.+.++....+.|..
T Consensus       558 y~KLVDFGFAKki~~g-~KTwTFcGTpEYVAPEIIL---nKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILk  633 (732)
T KOG0614|consen  558 YLKLVDFGFAKKIGSG-RKTWTFCGTPEYVAPEIIL---NKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILK  633 (732)
T ss_pred             ceEEeehhhHHHhccC-CceeeecCCcccccchhhh---ccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHh
Confidence            9999999999998876 4556899999999999998   67789999999999999999999999999999999888887


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVA  232 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~  232 (302)
                      +   ......|..++..+.+||+++-..+|.+|...                     ..+|..||++|.||.+.+|..+.
T Consensus       634 G---id~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~---------------------~~~gI~DIkkH~Wf~gfdweglr  689 (732)
T KOG0614|consen  634 G---IDKIEFPRRITKTATDLIKKLCRDNPTERLGY---------------------QKGGINDIKKHRWFEGFDWEGLR  689 (732)
T ss_pred             h---hhhhhcccccchhHHHHHHHHHhcCcHhhhcc---------------------ccCChHHHHhhhhhhcCChhhhh
Confidence            4   33445568899999999999999999999863                     35788899999999988887766


Q ss_pred             HHHh
Q psy3574         233 IELL  236 (302)
Q Consensus       233 ~~~~  236 (302)
                      ...+
T Consensus       690 ~~~L  693 (732)
T KOG0614|consen  690 SRTL  693 (732)
T ss_pred             hccC
Confidence            5443

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-37  Score=273.14  Aligned_cols=181  Identities=19%  Similarity=0.270  Sum_probs=152.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. .++...+   .+++..++.++.||+.||.|||++||+||||||    ++.++
T Consensus        55 iv~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~  130 (312)
T cd05585          55 IVPLKFSFQSPEKLYLVLAFINGGELF-HHLQREG---RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQG  130 (312)
T ss_pred             EeceeeEEecCCeEEEEEcCCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCC
Confidence            455655544    58999999999999 7777666   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+++............+||+.|+|||++.   +..++.++||||+||++|+|++|..||.+.+.......+..
T Consensus       131 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~  207 (312)
T cd05585         131 HIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLL---GHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQ  207 (312)
T ss_pred             cEEEEECcccccCccCCCccccccCCcccCCHHHHc---CCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHc
Confidence            999999999876543333344567999999999996   66789999999999999999999999988877776666655


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC---CHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP---TADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~---t~~~ll~  193 (302)
                      ....     .+..++..+.+||.+||..||.+||   ++.++++
T Consensus       208 ~~~~-----~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         208 EPLR-----FPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             CCCC-----CCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence            4322     2356889999999999999999997   5788999

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0604|consensus

Probab=100.00  E-value=3.7e-38  Score=259.63  Aligned_cols=177  Identities=19%  Similarity=0.265  Sum_probs=152.8

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-------CCCCCCEEEeccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-------KDRCGDVKLADFGVS   82 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-------~~~~~~ikL~DFg~a   82 (302)
                      +.||||.++||+|+ +-++.++ ...++|.++..|++||..|+.|||+.+|.||||||       -..+..+||+|||+|
T Consensus       134 LLiVmE~meGGeLf-sriq~~g-~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA  211 (400)
T KOG0604|consen  134 LLIVMECMEGGELF-SRIQDRG-DQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA  211 (400)
T ss_pred             eEeeeecccchHHH-HHHHHcc-cccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccc
Confidence            36999999999999 6666665 23699999999999999999999999999999999       456778999999999


Q ss_pred             cccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHhcCCCCC
Q psy3574          83 AQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH----PMRALFLMSKSGFKPP  158 (302)
Q Consensus        83 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~~~~i~~~~~~~~  158 (302)
                      +..... ....+.|.|+.|.|||++-   ...|+...|+||+||++|-|++|.+||....    ...+..+|..+.+.+|
T Consensus       212 K~t~~~-~~L~TPc~TPyYvaPevlg---~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP  287 (400)
T KOG0604|consen  212 KETQEP-GDLMTPCFTPYYVAPEVLG---PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFP  287 (400)
T ss_pred             cccCCC-ccccCCcccccccCHHHhC---chhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCC
Confidence            987643 4455678899999999994   6669999999999999999999999997653    3455667888877777


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         159 ALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       159 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .. .+..+|..++|+|+.+|..+|.+|.|++++++
T Consensus       288 ~p-EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  288 EP-EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             Ch-hHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence            53 45778999999999999999999999999999

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=2.8e-37  Score=271.84  Aligned_cols=193  Identities=23%  Similarity=0.315  Sum_probs=161.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||++||+|. .++....   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        58 i~~~~~~~~~~~~~~lv~e~~~gg~L~-~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~  133 (316)
T cd05592          58 LTHLFCTFQTKEHLFFVMEYLNGGDLM-FHIQSSG---RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG  133 (316)
T ss_pred             ccceeeEEEcCCEEEEEEcCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC
Confidence            456666554    58999999999999 7777666   799999999999999999999999999999999    78899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+++............+||+.|+|||++.   +..++.++|||||||++|+|++|..||.+.+.......+..
T Consensus       134 ~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~  210 (316)
T cd05592         134 HIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILK---GQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN  210 (316)
T ss_pred             CEEEccCcCCeECCCCCCccccccCCccccCHHHHc---CCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            999999999976544333444567999999999985   56688999999999999999999999998887776666554


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHH-HHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD-KLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRV  231 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~-~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~  231 (302)
                      ....     .+..++.++.+||.+||..+|.+|+++. ++++                          ||||....+...
T Consensus       211 ~~~~-----~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~--------------------------h~~~~~~~~~~~  259 (316)
T cd05592         211 DRPH-----FPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ--------------------------HPFFRGIDWERL  259 (316)
T ss_pred             CCCC-----CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc--------------------------CcccCCCCHHHH
Confidence            3222     2355789999999999999999999864 7778                          999987666543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-37  Score=268.71  Aligned_cols=178  Identities=22%  Similarity=0.288  Sum_probs=152.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+.+|+|. +++...+   .+++..+..++.||+.||+|||++||+||||||    ++.+|
T Consensus        63 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~  138 (291)
T cd05612          63 IIRLFWTEHDQRFLYMLMEYVPGGELF-SYLRNSG---RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG  138 (291)
T ss_pred             HhhhHhhhccCCeEEEEEeCCCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC
Confidence            466666554    58999999999999 7777766   799999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++......   ....+|++.|+|||++.   +..++.++|||||||++|+|++|+.||.+.+.......+..
T Consensus       139 ~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~  212 (291)
T cd05612         139 HIKLTDFGFAKKLRDR---TWTLCGTPEYLAPEVIQ---SKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILA  212 (291)
T ss_pred             CEEEEecCcchhccCC---cccccCChhhcCHHHHc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            9999999998766432   23457899999999985   66688999999999999999999999998887777777666


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC-----HHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT-----ADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t-----~~~ll~  193 (302)
                      .....     +..++..+++||++||+.||.+|++     ++++++
T Consensus       213 ~~~~~-----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  253 (291)
T cd05612         213 GKLEF-----PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN  253 (291)
T ss_pred             CCcCC-----CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence            54332     3456899999999999999999995     999999

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=3.9e-37  Score=270.94  Aligned_cols=194  Identities=19%  Similarity=0.266  Sum_probs=160.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    +|+||||++||+|. .++....   .+++.++..++.|++.||.|||++||+||||||    ++.++
T Consensus        58 iv~~~~~~~~~~~~~lv~ey~~~g~L~-~~l~~~~---~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~  133 (316)
T cd05619          58 LTHLYCTFQTKENLFFVMEYLNGGDLM-FHIQSCH---KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDG  133 (316)
T ss_pred             CcceEEEEEeCCEEEEEEeCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC
Confidence            456666554    58999999999999 7776655   689999999999999999999999999999999    78899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++.............+||..|+|||++.   +..++.++|+||+||++|+|++|..||.+.+.......+..
T Consensus       134 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~  210 (316)
T cd05619         134 HIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILL---GQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRM  210 (316)
T ss_pred             CEEEccCCcceECCCCCCceeeecCCccccCHHHHc---CCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            999999999875433223334567999999999985   56689999999999999999999999988877766666554


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHH-HHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD-KLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRV  231 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~-~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~  231 (302)
                      ....     .+..++.++.++|.+||..||++|+++. ++++                          ||||+...+...
T Consensus       211 ~~~~-----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~--------------------------h~~~~~~~~~~~  259 (316)
T cd05619         211 DNPC-----YPRWLTREAKDILVKLFVREPERRLGVKGDIRQ--------------------------HPFFREIDWSAL  259 (316)
T ss_pred             CCCC-----CCccCCHHHHHHHHHHhccCHhhcCCChHHHHc--------------------------CcccCCCCHHHH
Confidence            3322     2345789999999999999999999996 7888                          999998776544


Q ss_pred             H
Q psy3574         232 A  232 (302)
Q Consensus       232 ~  232 (302)
                      .
T Consensus       260 ~  260 (316)
T cd05619         260 E  260 (316)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=1.6e-37  Score=274.84  Aligned_cols=194  Identities=22%  Similarity=0.303  Sum_probs=161.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++|+|. .++....   .+++.+++.++.||+.||+|||++||+||||||    ++.++
T Consensus        57 iv~~~~~~~~~~~~~lv~Ey~~~g~L~-~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~  132 (328)
T cd05593          57 LTSLKYSFQTKDRLCFVMEYVNGGELF-FHLSRER---VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG  132 (328)
T ss_pred             CcceEEEEEcCCEEEEEEeCCCCCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCC
Confidence            355555544    58999999999998 7776665   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+++............+||+.|+|||++.   +..++.++|||||||++|+|++|+.||.+.+.......+..
T Consensus       133 ~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~  209 (328)
T cd05593         133 HIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM  209 (328)
T ss_pred             cEEEecCcCCccCCCcccccccccCCcCccChhhhc---CCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc
Confidence            999999999876443323334567999999999985   66789999999999999999999999988777666655544


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      ....     .+..++.++.+||.+||..||.+|+     ++.++++                          ||||....
T Consensus       210 ~~~~-----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~--------------------------h~~~~~~~  258 (328)
T cd05593         210 EDIK-----FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR--------------------------HSFFTGVN  258 (328)
T ss_pred             CCcc-----CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc--------------------------CCCcCCCC
Confidence            3322     2456899999999999999999997     8999999                          99999876


Q ss_pred             hhHHH
Q psy3574         228 SKRVA  232 (302)
Q Consensus       228 ~~~~~  232 (302)
                      +....
T Consensus       259 ~~~~~  263 (328)
T cd05593         259 WQDVY  263 (328)
T ss_pred             HHHHH
Confidence            65443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.5e-37  Score=274.45  Aligned_cols=193  Identities=21%  Similarity=0.246  Sum_probs=160.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. .++....   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        58 iv~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~  133 (323)
T cd05575          58 LVGLHYSFQTADKLYFVLDYVNGGELF-FHLQRER---SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQG  133 (323)
T ss_pred             CCCeeEEEEeCCEEEEEEcCCCCCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC
Confidence            456666554    58999999999999 7777666   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++.............+|++.|+|||++.   +..++.++|||||||++|+|++|..||...+..+....+..
T Consensus       134 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~  210 (323)
T cd05575         134 HVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLR---KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILN  210 (323)
T ss_pred             cEEEeccCCCcccccCCCccccccCChhhcChhhhc---CCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHc
Confidence            999999999876543333344567999999999985   66789999999999999999999999998877776666655


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH----HHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchh
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA----DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMS  228 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~----~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~  228 (302)
                      ....     .+..++..+.++|.+||+.||.+||++    .++++                          ||||....+
T Consensus       211 ~~~~-----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~--------------------------~~~~~~~~~  259 (323)
T cd05575         211 KPLR-----LKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKN--------------------------HVFFSSINW  259 (323)
T ss_pred             CCCC-----CCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHc--------------------------CCCcCCCCH
Confidence            4322     234568999999999999999999987    57777                          999987666


Q ss_pred             hHH
Q psy3574         229 KRV  231 (302)
Q Consensus       229 ~~~  231 (302)
                      ...
T Consensus       260 ~~~  262 (323)
T cd05575         260 DDL  262 (323)
T ss_pred             HHH
Confidence            544

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG4717|consensus

Probab=100.00  E-value=1.2e-37  Score=273.01  Aligned_cols=181  Identities=22%  Similarity=0.317  Sum_probs=162.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-----~~~~   71 (302)
                      |||+|...-    +|+|+|+-.+|+|++.|++...   .+.|+.++++++||+.|+.|||+.++||||+||     ..+-
T Consensus        79 iVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~---Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKl  155 (864)
T KOG4717|consen   79 IVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEE---GLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKL  155 (864)
T ss_pred             eeeeeehhcccceEEEEEEecCCchHHHHHHhhhc---cccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeec
Confidence            577777433    6999999999999966676666   799999999999999999999999999999999     6678


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYN-QQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~-~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      |-|||+|||++..+..+ ....+.||+..|-|||+++   +..|+ +++||||||||||.|+||++||...+..+.+..|
T Consensus       156 GlVKLTDFGFSNkf~PG-~kL~TsCGSLAYSAPEILL---GDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmI  231 (864)
T KOG4717|consen  156 GLVKLTDFGFSNKFQPG-KKLTTSCGSLAYSAPEILL---GDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMI  231 (864)
T ss_pred             CceEeeeccccccCCCc-chhhcccchhhccCchhhh---cCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhh
Confidence            99999999999888776 5567889999999999998   44454 6899999999999999999999999999999999


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+..|     ..++.++++||..||+.||++|.+.++|..
T Consensus       232 mDCKYtvP-----shvS~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  232 MDCKYTVP-----SHVSKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             hcccccCc-----hhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence            88877655     778999999999999999999999999999

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=2.3e-37  Score=274.88  Aligned_cols=191  Identities=18%  Similarity=0.239  Sum_probs=162.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. .++....   .+++..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus        93 Iv~~~~~~~~~~~~~lv~Ey~~~g~L~-~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~  168 (340)
T PTZ00426         93 CVNLYGSFKDESYLYLVLEFVIGGEFF-TFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG  168 (340)
T ss_pred             CcceEEEEEeCCEEEEEEeCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC
Confidence            567777665    58999999999999 7777766   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++.....   .....+||+.|+|||++.   +..++.++|+||+||++|+|++|..||.+.+.......+..
T Consensus       169 ~ikL~DFG~a~~~~~---~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~  242 (340)
T PTZ00426        169 FIKMTDFGFAKVVDT---RTYTLCGTPEYIAPEILL---NVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILE  242 (340)
T ss_pred             CEEEecCCCCeecCC---CcceecCChhhcCHHHHh---CCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhc
Confidence            999999999976543   223567999999999995   56688999999999999999999999998887776666665


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      .....     +..++..+.++|++||+.||.+|+     +++++++                          ||||....
T Consensus       243 ~~~~~-----p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~--------------------------hp~f~~~~  291 (340)
T PTZ00426        243 GIIYF-----PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE--------------------------HPWFGNID  291 (340)
T ss_pred             CCCCC-----CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc--------------------------CCCcCCCC
Confidence            44332     355789999999999999999996     8999999                          99999877


Q ss_pred             hhHHH
Q psy3574         228 SKRVA  232 (302)
Q Consensus       228 ~~~~~  232 (302)
                      |....
T Consensus       292 ~~~~~  296 (340)
T PTZ00426        292 WVSLL  296 (340)
T ss_pred             HHHHH
Confidence            65443

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=1.1e-37  Score=275.56  Aligned_cols=194  Identities=22%  Similarity=0.301  Sum_probs=161.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh-CCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK-SGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~i~Hrdlkp----~~~~   71 (302)
                      |+++++.|.    .|+||||++||+|. .++....   .+++..++.++.||+.||+|||+ +||+||||||    ++.+
T Consensus        57 i~~~~~~~~~~~~~~lv~E~~~~~~L~-~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~  132 (325)
T cd05594          57 LTALKYSFQTHDRLCFVMEYANGGELF-FHLSRER---VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD  132 (325)
T ss_pred             CCceEEEEEcCCEEEEEEeCCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCC
Confidence            355555444    58999999999999 7776665   79999999999999999999997 7999999999    8889


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      |.+||+|||+++............+|++.|+|||++.   +..++.++|||||||++|+|++|..||.+.+.......+.
T Consensus       133 ~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~  209 (325)
T cd05594         133 GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL  209 (325)
T ss_pred             CCEEEecCCCCeecCCCCcccccccCCcccCCHHHHc---cCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHh
Confidence            9999999999876443323334567999999999985   6678999999999999999999999998887776666655


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccc
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYD  226 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~  226 (302)
                      ......     +..+++++.+||.+||+.||++|+     ++.++++                          ||||...
T Consensus       210 ~~~~~~-----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~--------------------------h~~~~~~  258 (325)
T cd05594         210 MEEIRF-----PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ--------------------------HKFFAGI  258 (325)
T ss_pred             cCCCCC-----CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc--------------------------CCCcCCC
Confidence            443322     356799999999999999999997     8999999                          9999976


Q ss_pred             hhhHHH
Q psy3574         227 MSKRVA  232 (302)
Q Consensus       227 ~~~~~~  232 (302)
                      .+....
T Consensus       259 ~~~~~~  264 (325)
T cd05594         259 VWQDVY  264 (325)
T ss_pred             CHHHHH
Confidence            665443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=3e-37  Score=273.16  Aligned_cols=190  Identities=21%  Similarity=0.302  Sum_probs=161.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+.||+|. .++...+   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        80 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~  155 (329)
T PTZ00263         80 IVNMMCSFQDENRVYFLLEFVVGGELF-THLRKAG---RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKG  155 (329)
T ss_pred             CCcEEEEEEcCCEEEEEEcCCCCChHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCC
Confidence            567777665    59999999999999 7776666   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++......   ....+|++.|+|||++.   +..++.++|||||||++|+|++|..||.+.........+..
T Consensus       156 ~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~  229 (329)
T PTZ00263        156 HVKVTDFGFAKKVPDR---TFTLCGTPEYLAPEVIQ---SKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILA  229 (329)
T ss_pred             CEEEeeccCceEcCCC---cceecCChhhcCHHHHc---CCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhc
Confidence            9999999999866432   23457999999999996   66688999999999999999999999998887777766665


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC-----HHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT-----ADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t-----~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      ....     .+..++..+++||.+||+.||.+|++     +++++.                          ||||....
T Consensus       230 ~~~~-----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~--------------------------hp~f~~~~  278 (329)
T PTZ00263        230 GRLK-----FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN--------------------------HPYFHGAN  278 (329)
T ss_pred             CCcC-----CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc--------------------------CCccCCCC
Confidence            4332     23457899999999999999999997     788998                          99998766


Q ss_pred             hhHH
Q psy3574         228 SKRV  231 (302)
Q Consensus       228 ~~~~  231 (302)
                      +...
T Consensus       279 ~~~~  282 (329)
T PTZ00263        279 WDKL  282 (329)
T ss_pred             HHHH
Confidence            5543

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=3.6e-37  Score=272.03  Aligned_cols=185  Identities=23%  Similarity=0.284  Sum_probs=157.5

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||++||+|. ..+...+   .+++..+..++.||+.||+|||++||+||||||    ++.++.+||+|||+++..
T Consensus        76 ~~lv~E~~~~g~L~-~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~  151 (323)
T cd05616          76 LYFVMEYVNGGDLM-YQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  151 (323)
T ss_pred             EEEEEcCCCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceec
Confidence            58999999999999 7776666   799999999999999999999999999999999    888999999999998765


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR  165 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  165 (302)
                      ..........+||+.|+|||++.   ...++.++|||||||++|+|++|+.||.+.+.......+.......     +..
T Consensus       152 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~-----p~~  223 (323)
T cd05616         152 MWDGVTTKTFCGTPDYIAPEIIA---YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY-----PKS  223 (323)
T ss_pred             CCCCCccccCCCChhhcCHHHhc---CCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-----CCc
Confidence            43323344567999999999996   6678999999999999999999999999888877777776654332     356


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCH-----HHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHH
Q psy3574         166 WSSTFHNFVKIALTKNPKKRPTA-----DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVA  232 (302)
Q Consensus       166 ~s~~~~~li~~~L~~dp~~R~t~-----~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~  232 (302)
                      ++.++.+++.+||+.+|.+|+++     .++++                          ||||+...|....
T Consensus       224 ~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~--------------------------h~~~~~~~~~~~~  269 (323)
T cd05616         224 MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE--------------------------HAFFRYIDWEKLE  269 (323)
T ss_pred             CCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhc--------------------------CCCcCCCCHHHHH
Confidence            79999999999999999999984     66777                          9999987766544

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0589|consensus

Probab=100.00  E-value=3.9e-37  Score=270.80  Aligned_cols=191  Identities=24%  Similarity=0.348  Sum_probs=169.8

Q ss_pred             Cchhhhcch-----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL-----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~-----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||.|++.|.     +||||+||+||+|.+.+.+++  +.-++|+.+..++.|++.|+.|||+++|+|||||+    +.++
T Consensus        65 iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~  142 (426)
T KOG0589|consen   65 IVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKD  142 (426)
T ss_pred             eeeeccchhcCCceEEEEEeecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcccc
Confidence            678888887     599999999999995555554  34799999999999999999999999999999999    8899


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +.|||.|||+|+.+........+.+||+.||+||++.   +..|+.++|||||||++|||++-+++|...+......+|.
T Consensus       143 ~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~---d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~  219 (426)
T KOG0589|consen  143 KKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILS---DIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKIN  219 (426)
T ss_pred             CceeecchhhhhhcCCchhhhheecCCCcccCHHHhC---CCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHh
Confidence            9999999999999988755777889999999999996   8889999999999999999999999999999999999998


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRA  200 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~  200 (302)
                      +....+.    +..++.+++.+|+.||..+|..||++.++|..+..++.
T Consensus       220 ~~~~~Pl----p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~  264 (426)
T KOG0589|consen  220 RGLYSPL----PSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRY  264 (426)
T ss_pred             hccCCCC----CccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence            8774433    46789999999999999999999999999996554433

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-37  Score=273.30  Aligned_cols=183  Identities=22%  Similarity=0.282  Sum_probs=151.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.|.    +|+||||+++|+|. .++...+   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        58 i~~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~---~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~  133 (330)
T cd05586          58 IVGLKFSFQTDSDLYLVTDYMSGGELF-WHLQKEG---RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG  133 (330)
T ss_pred             CcceEEEEecCCeEEEEEcCCCCChHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC
Confidence            345555444    69999999999999 7777666   799999999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++.............+||..|+|||++.  ....++.++|||||||++|+|++|..||.+.+.......+..
T Consensus       134 ~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~  211 (330)
T cd05586         134 HIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLL--DEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAF  211 (330)
T ss_pred             CEEEecCCcCcCCCCCCCCccCccCCccccCHHHHc--CCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHc
Confidence            999999999876443333344567999999999985  234578999999999999999999999998877776666665


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC----CHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP----TADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~----t~~~ll~  193 (302)
                      .....+    ...++..+.+||.+||..||.+||    ++.++++
T Consensus       212 ~~~~~~----~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         212 GKVRFP----KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             CCCCCC----CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            443333    134789999999999999999998    6888888

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=1.5e-36  Score=268.26  Aligned_cols=180  Identities=20%  Similarity=0.279  Sum_probs=152.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||++||+|. .++..+    .+++..+..++.||+.||+|||++||+||||||    ++.++
T Consensus        64 i~~~~~~~~~~~~~~lv~E~~~~~~L~-~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~  138 (324)
T cd05589          64 LVNLFACFQTEDHVCFVMEYAAGGDLM-MHIHTD----VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEG  138 (324)
T ss_pred             hhceeeEEEcCCEEEEEEcCCCCCcHH-HHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC
Confidence            456666555    59999999999998 666543    599999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+++............+|++.|+|||++.   +..++.++|+|||||++|+|++|+.||.+.+.......+..
T Consensus       139 ~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~  215 (324)
T cd05589         139 FVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLT---ETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVN  215 (324)
T ss_pred             cEEeCcccCCccCCCCCCcccccccCccccCHhHhc---CCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            999999999876543333344567999999999985   56688999999999999999999999998887777766665


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~  193 (302)
                      .....     +..++..+.++|.+||+.||.+||     ++.++++
T Consensus       216 ~~~~~-----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         216 DEVRY-----PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             CCCCC-----CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence            44332     356799999999999999999999     6888888

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.4e-36  Score=268.29  Aligned_cols=181  Identities=20%  Similarity=0.239  Sum_probs=153.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    .|+||||+.||+|. .++...+   .+.+..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus        62 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~  137 (323)
T cd05584          62 IVDLIYAFQTGGKLYLILEYLSGGELF-MHLEREG---IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQG  137 (323)
T ss_pred             hhceeeEEecCCeEEEEEeCCCCchHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence            466666655    58999999999999 7777766   789999999999999999999999999999999    78899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+++.............|++.|+|||++.   ...++.++|||||||++|+|++|+.||...+.......+..
T Consensus       138 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~  214 (323)
T cd05584         138 HVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILM---RSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILK  214 (323)
T ss_pred             CEEEeeCcCCeecccCCCcccccCCCccccChhhcc---CCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            999999999875443333344567999999999996   56678999999999999999999999998887777666665


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~  193 (302)
                      ....     .+..++..+.+||.+||+.+|++|+     +++++++
T Consensus       215 ~~~~-----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         215 GKLN-----LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             CCCC-----CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            4332     2356789999999999999999999     8999999

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=1.5e-36  Score=268.76  Aligned_cols=181  Identities=21%  Similarity=0.272  Sum_probs=145.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    +|+||||++||+|. .++...+   .+++..++.++.||+.||.|||++||+||||||    ++.++
T Consensus        58 Iv~~~~~~~~~~~~~lv~e~~~~g~L~-~~~~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~  133 (329)
T cd05588          58 LVGLHSCFQTESRLFFVIEFVSGGDLM-FHMQRQR---KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEG  133 (329)
T ss_pred             CCceEEEEEcCCEEEEEEeCCCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC
Confidence            466666554    59999999999998 7776666   799999999999999999999999999999999    78899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------ChH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL--------HPM  144 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--------~~~  144 (302)
                      .+||+|||+++............+||+.|+|||++.   +..++.++|+||+||++|+|++|+.||...        ...
T Consensus       134 ~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~  210 (329)
T cd05588         134 HIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILR---GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTE  210 (329)
T ss_pred             CEEECcCccccccccCCCccccccCCccccCHHHHc---CCCCCCccceechHHHHHHHHHCCCCcccccccccccccch
Confidence            999999999875433323344568999999999996   667889999999999999999999999531        111


Q ss_pred             HHH-HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC------HHHHHH
Q psy3574         145 RAL-FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT------ADKLLQ  193 (302)
Q Consensus       145 ~~~-~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t------~~~ll~  193 (302)
                      ... ..+.....     ..+..++..+.++|.+||+.||.+|++      +.++++
T Consensus       211 ~~~~~~~~~~~~-----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         211 DYLFQVILEKQI-----RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             HHHHHHHHcCCC-----CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence            222 22222221     234567899999999999999999997      678888

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.8e-36  Score=266.57  Aligned_cols=183  Identities=21%  Similarity=0.293  Sum_probs=152.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. .++...+   .+++..++.++.||+.||.|||++||+||||||    ++.++
T Consensus        63 iv~~~~~~~~~~~~~lv~e~~~g~~L~-~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~  138 (333)
T cd05600          63 LVKLLYAFQDDEYLYLAMEYVPGGDFR-TLLNNLG---VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG  138 (333)
T ss_pred             CccEEEEEEcCCEEEEEEeCCCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC
Confidence            456665554    58999999999999 8887766   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++.....   .....+|++.|+|||++.   +..++.++|||||||++|+|++|..||...+..+....+..
T Consensus       139 ~~kL~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~  212 (333)
T cd05600         139 HIKLTDFGLSKGIVT---YANSVVGSPDYMAPEVLR---GKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKY  212 (333)
T ss_pred             CEEEEeCcCCccccc---ccCCcccCccccChhHhc---CCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHh
Confidence            999999999876543   234567999999999996   55789999999999999999999999998877776665544


Q ss_pred             cCCC--CCCCC-CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFK--PPALK-DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~--~~~~~-~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....  .+... ....++.++.+||.+||..+|.+|+++.++++
T Consensus       213 ~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~  256 (333)
T cd05600         213 WKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKN  256 (333)
T ss_pred             ccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence            3211  11111 11256899999999999999999999999999

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=2e-36  Score=267.19  Aligned_cols=194  Identities=23%  Similarity=0.294  Sum_probs=160.5

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.|.    .|+||||++||+|. .++...+   .+++.++..++.||+.||+|||++||+||||||    ++.++.
T Consensus        64 ~~~~~~~~~~~~~~lv~Ey~~~g~L~-~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~  139 (323)
T cd05615          64 TQLHSCFQTVDRLYFVMEYVNGGDLM-YHIQQVG---KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGH  139 (323)
T ss_pred             hheeeEEecCCEEEEEEcCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC
Confidence            34554443    58999999999999 7777766   799999999999999999999999999999999    888999


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      +||+|||+++............+||+.|+|||++.   +..++.++|+||+||++|+|++|..||.+.........+...
T Consensus       140 ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~  216 (323)
T cd05615         140 IKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIA---YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH  216 (323)
T ss_pred             EEEeccccccccCCCCccccCccCCccccCHHHHc---CCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            99999999876543323334567999999999985   566889999999999999999999999988877777766654


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH-----HHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchh
Q psy3574         154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA-----DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMS  228 (302)
Q Consensus       154 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~-----~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~  228 (302)
                      ....     +..++.++.+++.+||..+|.+|++.     +++++                          ||||....+
T Consensus       217 ~~~~-----p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~--------------------------h~~f~~~~~  265 (323)
T cd05615         217 NVSY-----PKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIRE--------------------------HAFFRRIDW  265 (323)
T ss_pred             CCCC-----CccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhc--------------------------CcccCCCCH
Confidence            4332     35678999999999999999999984     45555                          999998776


Q ss_pred             hHHHH
Q psy3574         229 KRVAI  233 (302)
Q Consensus       229 ~~~~~  233 (302)
                      .....
T Consensus       266 ~~~~~  270 (323)
T cd05615         266 DKLEN  270 (323)
T ss_pred             HHHhc
Confidence            65443

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=4.1e-36  Score=269.45  Aligned_cols=196  Identities=21%  Similarity=0.302  Sum_probs=157.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    +|+|||||+||+|. +++...+   .+++..++.++.|++.||+|||++||+||||||    ++.++
T Consensus        63 iv~~~~~~~~~~~~~lv~E~~~gg~L~-~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~  138 (363)
T cd05628          63 VVKMFYSFQDKLNLYLIMEFLPGGDMM-TLLMKKD---TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKG  138 (363)
T ss_pred             cceEEEEEecCCeEEEEEcCCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC
Confidence            456666555    58999999999999 7777666   799999999999999999999999999999999    88899


Q ss_pred             CEEEecccccccccccc-----------------------------------ccccccccCcccchhhcccccccCCCCc
Q psy3574          73 DVKLADFGVSAQITATI-----------------------------------NKRKSFIGTPYWMAPEVAAVERKGGYNQ  117 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~-----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~  117 (302)
                      .+||+|||+++.+....                                   ......+||+.|+|||++.   +..++.
T Consensus       139 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~---~~~~~~  215 (363)
T cd05628         139 HVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFM---QTGYNK  215 (363)
T ss_pred             CEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHc---CCCCCC
Confidence            99999999987543210                                   0012457999999999996   667899


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCC---CCCCHHHHHHH
Q psy3574         118 QCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPK---KRPTADKLLQV  194 (302)
Q Consensus       118 ~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~---~R~t~~~ll~~  194 (302)
                      ++|||||||++|+|++|+.||.+.........+........ .+....++.++++||.+|+. +|.   .||+++++++ 
T Consensus       216 ~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~-~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~-  292 (363)
T cd05628         216 LCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLI-FPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKT-  292 (363)
T ss_pred             chhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCccc-CCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhC-
Confidence            99999999999999999999998888777777665332211 11123478999999999775 444   4589999999 


Q ss_pred             HHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHH
Q psy3574         195 ILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRV  231 (302)
Q Consensus       195 l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~  231 (302)
                                               ||||++..|...
T Consensus       293 -------------------------hp~f~~~~~~~~  304 (363)
T cd05628         293 -------------------------NPFFEGVDWEHI  304 (363)
T ss_pred             -------------------------CCCCCCCCHHHH
Confidence                                     999998776654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=2.3e-36  Score=267.35  Aligned_cols=193  Identities=22%  Similarity=0.284  Sum_probs=152.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.|.    +|+||||++||+|. .++....   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        58 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~  133 (327)
T cd05617          58 LVGLHSCFQTTSRLFLVIEYVNGGDLM-FHMQRQR---KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADG  133 (327)
T ss_pred             EeeEEEEEEeCCEEEEEEeCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCC
Confidence            345555444    58999999999999 7776665   799999999999999999999999999999999    78899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC------ChHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL------HPMRA  146 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~  146 (302)
                      .+||+|||+++............+||+.|+|||++.   +..++.++|||||||++|+|++|..||...      .....
T Consensus       134 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~  210 (327)
T cd05617         134 HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILR---GEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDY  210 (327)
T ss_pred             CEEEeccccceeccCCCCceecccCCcccCCHHHHC---CCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHH
Confidence            999999999875433223344567999999999995   667899999999999999999999999532      22222


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH------HHHHHHHHHHhHHHHHHhhhCCCCCCccccCC
Q psy3574         147 LFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA------DKLLQVILIHRARVAAVERKGGYNQQCDIWAH  220 (302)
Q Consensus       147 ~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~------~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~h  220 (302)
                      ........    ....+..++..+.++|.+||+.||.+|+++      +++++                          |
T Consensus       211 ~~~~~~~~----~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~--------------------------h  260 (327)
T cd05617         211 LFQVILEK----PIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKS--------------------------H  260 (327)
T ss_pred             HHHHHHhC----CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHc--------------------------C
Confidence            22222221    112345678999999999999999999984      56666                          9


Q ss_pred             CccccchhhH
Q psy3574         221 PFFKYDMSKR  230 (302)
Q Consensus       221 p~f~~~~~~~  230 (302)
                      |||....|..
T Consensus       261 ~~f~~~~~~~  270 (327)
T cd05617         261 TFFRSIDWDL  270 (327)
T ss_pred             CCCCCCCHHH
Confidence            9999776543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0663|consensus

Probab=100.00  E-value=8.5e-37  Score=254.98  Aligned_cols=178  Identities=20%  Similarity=0.197  Sum_probs=154.5

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|||||||+. +|. .++..-.  .+|...+++.++.|+++||+|||.+.|+|||+|+    +...|.+||+|||+|+.+
T Consensus       152 iy~VMe~~Eh-DLk-sl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y  227 (419)
T KOG0663|consen  152 IYIVMEYVEH-DLK-SLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREY  227 (419)
T ss_pred             eeeeHHHHHh-hHH-HHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhh
Confidence            5899999998 999 6665543  3899999999999999999999999999999999    889999999999999999


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCC----
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK----  161 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~----  161 (302)
                      .......+..+-|.+|.|||.+.+  ...|+.++|+||+|||+.||+++++.|.+....+++.+|.+....|....    
T Consensus       228 gsp~k~~T~lVVTLWYRaPELLLG--~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~  305 (419)
T KOG0663|consen  228 GSPLKPYTPLVVTLWYRAPELLLG--AKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGY  305 (419)
T ss_pred             cCCcccCcceEEEeeecCHHHhcC--CcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCc
Confidence            988777778889999999999984  55699999999999999999999999999999999999887432221100    


Q ss_pred             ----------------------C-CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         162 ----------------------D-KDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       162 ----------------------~-~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                            + ...++....+|++.+|.+||.+|.|++++|+
T Consensus       306 ~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  306 SELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             cccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence                                  0 0125688999999999999999999999999

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.5e-36  Score=263.40  Aligned_cols=201  Identities=21%  Similarity=0.237  Sum_probs=156.0

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      |++++.+.    .|+||||+++|+|. .++.... ...+++..+..++.|++.||+|||++||+||||||    ++.++.
T Consensus        63 v~~~~~~~~~~~~~lv~e~~~~g~L~-~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~  140 (285)
T cd05631          63 VSLAYAYETKDALCLVLTIMNGGDLK-FHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGH  140 (285)
T ss_pred             EEEEEEEccCCeEEEEEEecCCCcHH-HHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCC
Confidence            44444443    68999999999998 5554322 12589999999999999999999999999999999    778899


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      +||+|||++...... .......|+..|+|||++.   +..++.++||||+||++|+|++|+.||...........+...
T Consensus       141 ~kl~Dfg~~~~~~~~-~~~~~~~g~~~y~aPE~~~---~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~  216 (285)
T cd05631         141 IRISDLGLAVQIPEG-ETVRGRVGTVGYMAPEVIN---NEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR  216 (285)
T ss_pred             EEEeeCCCcEEcCCC-CeecCCCCCCCccCHhhhc---CCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHH
Confidence            999999999775433 2233457899999999996   667899999999999999999999999876543222222211


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC-----HHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchh
Q psy3574         154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT-----ADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMS  228 (302)
Q Consensus       154 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t-----~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~  228 (302)
                      . .......+..++..+.+||++||+.||.+|++     ++++++                          ||||....+
T Consensus       217 ~-~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~--------------------------h~~~~~~~~  269 (285)
T cd05631         217 V-KEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ--------------------------HPIFKNINF  269 (285)
T ss_pred             h-hcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc--------------------------CHhhcCCCH
Confidence            1 11122234568999999999999999999997     889998                          999998777


Q ss_pred             hHHHHHH
Q psy3574         229 KRVAIEL  235 (302)
Q Consensus       229 ~~~~~~~  235 (302)
                      +......
T Consensus       270 ~~~~~~~  276 (285)
T cd05631         270 KRLEANM  276 (285)
T ss_pred             HHHHhCc
Confidence            6655443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0659|consensus

Probab=100.00  E-value=2.4e-36  Score=245.14  Aligned_cols=178  Identities=22%  Similarity=0.187  Sum_probs=152.2

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      +.||+||++. +|+ .+++.+.  ..|+...++.++.++++||+|||++.|+|||+||    ++.+|.+||+|||+|+.+
T Consensus        76 l~lVfEfm~t-dLe-~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f  151 (318)
T KOG0659|consen   76 LSLVFEFMPT-DLE-VVIKDKN--IILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFF  151 (318)
T ss_pred             eEEEEEeccc-cHH-HHhcccc--cccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhcc
Confidence            4699999988 999 6666554  3899999999999999999999999999999999    899999999999999998


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCC----
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK----  161 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~----  161 (302)
                      ..........+-|++|.|||.+.+  .+.|+..+|+||+||++.||+-|.+-|.+.+..+++..|...-..|....    
T Consensus       152 ~~p~~~~~~~V~TRWYRAPELLfG--sr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~  229 (318)
T KOG0659|consen  152 GSPNRIQTHQVVTRWYRAPELLFG--SRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEM  229 (318)
T ss_pred             CCCCcccccceeeeeccChHHhcc--chhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccc
Confidence            876555445578999999999985  45699999999999999999999999999999999998887433322110    


Q ss_pred             -------------------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         162 -------------------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       162 -------------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                         .....+.++.||+.+||..||.+|+++.++|+
T Consensus       230 ~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~  280 (318)
T KOG0659|consen  230 TSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK  280 (318)
T ss_pred             cccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence                               11234678899999999999999999999999

>KOG0658|consensus

Probab=100.00  E-value=5.9e-37  Score=259.26  Aligned_cols=180  Identities=21%  Similarity=0.263  Sum_probs=151.7

Q ss_pred             hheeEEEecCCcchHHHHHHhc-cccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-----CCCCCCEEEeccccc
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-----KDRCGDVKLADFGVS   82 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-----~~~~~~ikL~DFg~a   82 (302)
                      .+.+||||++. +|+ ..++.. ..+..++.-.++.+++||++||+|||+.||+||||||     ....|.+||||||.|
T Consensus        96 ~lnlVleymP~-tL~-~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSA  173 (364)
T KOG0658|consen   96 YLNLVLEYMPE-TLY-RVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSA  173 (364)
T ss_pred             HHHHHHHhchH-HHH-HHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcc
Confidence            35799999998 999 666631 1123799999999999999999999999999999999     556699999999999


Q ss_pred             cccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC-----
Q psy3574          83 AQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKP-----  157 (302)
Q Consensus        83 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----  157 (302)
                      +.+..+ ....++..|+.|+|||.+.  ..+.|+.+.||||.|||+.||+-|++.|.+.+..+++..|.+.-..|     
T Consensus       174 K~L~~~-epniSYicSRyYRaPELif--ga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I  250 (364)
T KOG0658|consen  174 KVLVKG-EPNISYICSRYYRAPELIF--GATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDI  250 (364)
T ss_pred             eeeccC-CCceeEEEeccccCHHHHc--CccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            998876 4446778899999999998  45679999999999999999999999999999999888887732111     


Q ss_pred             ------------CCCC-------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         158 ------------PALK-------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       158 ------------~~~~-------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                  +..+       .....++++.+|+.++|..+|.+|.++.+++.
T Consensus       251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence                        1111       23456899999999999999999999999999

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=1.5e-36  Score=268.36  Aligned_cols=193  Identities=21%  Similarity=0.256  Sum_probs=159.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. .++....   .+++..++.++.||+.||+|||++||+||||||    ++.+|
T Consensus        58 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~  133 (325)
T cd05604          58 LVGLHYSFQTTEKLYFVLDFVNGGELF-FHLQRER---SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQG  133 (325)
T ss_pred             CccEEEEEecCCEEEEEEcCCCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC
Confidence            456666554    58999999999998 7776666   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+++............+|++.|+|||++.   +..++.++|||||||++|+|++|..||...+.......+..
T Consensus       134 ~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~  210 (325)
T cd05604         134 HVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIR---KQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILH  210 (325)
T ss_pred             CEEEeecCCcccCCCCCCCcccccCChhhCCHHHHc---CCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHc
Confidence            999999999876443333344567999999999995   66788999999999999999999999998877776666655


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHH----HHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchh
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD----KLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMS  228 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~----~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~  228 (302)
                      ....     ....++..+.++|.+||..+|.+||++.    ++++                          ||||....+
T Consensus       211 ~~~~-----~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~--------------------------h~~f~~~~~  259 (325)
T cd05604         211 KPLV-----LRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQE--------------------------HPFFESLSW  259 (325)
T ss_pred             CCcc-----CCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhc--------------------------CCCcCCCCH
Confidence            4322     1245789999999999999999999874    6666                          999987666


Q ss_pred             hHH
Q psy3574         229 KRV  231 (302)
Q Consensus       229 ~~~  231 (302)
                      ...
T Consensus       260 ~~~  262 (325)
T cd05604         260 TDL  262 (325)
T ss_pred             HHH
Confidence            543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0032|consensus

Probab=100.00  E-value=3.2e-36  Score=267.71  Aligned_cols=183  Identities=23%  Similarity=0.350  Sum_probs=160.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC--------C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD--------K   68 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp--------~   68 (302)
                      ||.+++.|.    +|+|||+|.||+|++.+.+. .    ++|..+..+++|++.|++|||+.||+|||+||        .
T Consensus        98 iv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~-~----~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~  172 (382)
T KOG0032|consen   98 IVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK-H----YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKD  172 (382)
T ss_pred             EEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc-c----CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeecccc
Confidence            456666666    59999999999999555444 2    99999999999999999999999999999999        2


Q ss_pred             CCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q psy3574          69 DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF  148 (302)
Q Consensus        69 ~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  148 (302)
                      ..++.+|++|||++..... .......+||+.|+|||++.   ...|+..+|+||+||++|.|++|.+||.+........
T Consensus       173 ~~~~~ik~~DFGla~~~~~-~~~~~~~~Gtp~y~APEvl~---~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~  248 (382)
T KOG0032|consen  173 EGSGRIKLIDFGLAKFIKP-GERLHTIVGTPEYVAPEVLG---GRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL  248 (382)
T ss_pred             CCCCcEEEeeCCCceEccC-CceEeeecCCccccCchhhc---CCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH
Confidence            2246899999999998877 45677889999999999995   6789999999999999999999999999999988888


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+....+.... ..+..++..+++||++||..||.+|+|+.++|+
T Consensus       249 ~i~~~~~~f~~-~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  249 AILRGDFDFTS-EPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             HHHcCCCCCCC-CCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence            88888765443 335678999999999999999999999999999

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=3.8e-36  Score=260.24  Aligned_cols=179  Identities=20%  Similarity=0.277  Sum_probs=141.9

Q ss_pred             heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      .|+||||++||+|. .++.. ......+++..++.++.||+.||+|||++||+||||||    ++.++.+||+|||++..
T Consensus        68 ~~lv~e~~~~g~L~-~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~  146 (280)
T cd05608          68 LCLVMTIMNGGDLR-YHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVE  146 (280)
T ss_pred             EEEEEeCCCCCCHH-HHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcccee
Confidence            58999999999998 55432 22223699999999999999999999999999999999    77889999999999977


Q ss_pred             cccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCC
Q psy3574          85 ITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD  164 (302)
Q Consensus        85 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  164 (302)
                      ............|++.|+|||++.   +..++.++|+||+||++|+|++|+.||...........+...... .....+.
T Consensus       147 ~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~  222 (280)
T cd05608         147 LKDGQSKTKGYAGTPGFMAPELLQ---GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILN-DSVTYPD  222 (280)
T ss_pred             cCCCCccccccCCCcCccCHHHhc---CCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcc-cCCCCcc
Confidence            655433344567899999999996   567889999999999999999999999765432222222211111 1123345


Q ss_pred             CCCHHHHHHHHHhhhcCCCCCC-----CHHHHHH
Q psy3574         165 RWSSTFHNFVKIALTKNPKKRP-----TADKLLQ  193 (302)
Q Consensus       165 ~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~  193 (302)
                      .++..+.+++.+||+.||++|+     +++++++
T Consensus       223 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         223 KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence            6899999999999999999999     7888999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=4.8e-36  Score=265.48  Aligned_cols=181  Identities=20%  Similarity=0.271  Sum_probs=145.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++|+|. .++....   .+++..++.++.||+.||.|||++||+||||||    ++.++
T Consensus        58 iv~~~~~~~~~~~~~lv~E~~~~~~L~-~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~  133 (329)
T cd05618          58 LVGLHSCFQTESRLFFVIEYVNGGDLM-FHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG  133 (329)
T ss_pred             CCceeeEEEeCCEEEEEEeCCCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC
Confidence            466676654    58999999999998 6776665   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------ChH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL--------HPM  144 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--------~~~  144 (302)
                      .+||+|||+++............+||..|+|||++.   +..++.++|+|||||++|+|++|+.||...        ...
T Consensus       134 ~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~  210 (329)
T cd05618         134 HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILR---GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE  210 (329)
T ss_pred             CEEEeeCCccccccCCCCccccccCCccccCHHHHc---CCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccH
Confidence            999999999875433323344567999999999996   667889999999999999999999999521        111


Q ss_pred             H-HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC------HHHHHH
Q psy3574         145 R-ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT------ADKLLQ  193 (302)
Q Consensus       145 ~-~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t------~~~ll~  193 (302)
                      . ....+.....     ..+..++..+.++|.+||+.||.+|++      +.++++
T Consensus       211 ~~~~~~i~~~~~-----~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05618         211 DYLFQVILEKQI-----RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  261 (329)
T ss_pred             HHHHHHHhcCCC-----CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhc
Confidence            1 2222222222     234567899999999999999999998      467777

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0580|consensus

Probab=100.00  E-value=5.3e-36  Score=239.78  Aligned_cols=181  Identities=22%  Similarity=0.305  Sum_probs=162.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |.|.|++|.    .|+++||..+|+|+.++.....  ..+++.....+++|++.||.|||.++|+||||||    ++..|
T Consensus        84 ilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~--~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~  161 (281)
T KOG0580|consen   84 ILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRM--KRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAG  161 (281)
T ss_pred             HHhhhhheeccceeEEEEEecCCchHHHHHHhccc--ccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCC
Confidence            568888888    5999999999999955443322  3699999999999999999999999999999999    88999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||.+....  .....+.|||..|.+||+..   +..++..+|+|++|++.||++.|.+||......+....|..
T Consensus       162 ~lkiAdfGwsV~~p--~~kR~tlcgt~dyl~pEmv~---~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k  236 (281)
T KOG0580|consen  162 ELKIADFGWSVHAP--SNKRKTLCGTLDYLPPEMVE---GRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRK  236 (281)
T ss_pred             CeeccCCCceeecC--CCCceeeecccccCCHhhcC---CCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHH
Confidence            99999999987655  35677899999999999995   77899999999999999999999999999888888888888


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....|     ..++..++|+|.+||..+|.+|.+..+++.
T Consensus       237 ~~~~~p-----~~is~~a~dlI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  237 VDLKFP-----STISGGAADLISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             ccccCC-----cccChhHHHHHHHHhccCccccccHHHHhh
Confidence            776655     778999999999999999999999999999

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.6e-36  Score=267.68  Aligned_cols=193  Identities=23%  Similarity=0.346  Sum_probs=160.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||++||+|. .++...+   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        63 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~  138 (350)
T cd05573          63 IVKLYYSFQDEEHLYLVMEYMPGGDLM-NLLIRKD---VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADG  138 (350)
T ss_pred             ccchhhheecCCeEEEEEcCCCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence            466666554    58999999999999 7777665   799999999999999999999999999999999    88899


Q ss_pred             CEEEecccccccccccc-----------------------------ccccccccCcccchhhcccccccCCCCchhhHHH
Q psy3574          73 DVKLADFGVSAQITATI-----------------------------NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWA  123 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Diws  123 (302)
                      .+||+|||++.......                             .......||+.|+|||++.   +..++.++||||
T Consensus       139 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwS  215 (350)
T cd05573         139 HIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLR---GTPYGLECDWWS  215 (350)
T ss_pred             CEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHc---CCCCCCceeeEe
Confidence            99999999998765432                             1223457899999999996   567899999999


Q ss_pred             HHHHHHHHHhCCCCCCCCChHHHHHHHHh--cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC-HHHHHHHHHHHhH
Q psy3574         124 VGITAIELAELQPPMFDLHPMRALFLMSK--SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT-ADKLLQVILIHRA  200 (302)
Q Consensus       124 lG~il~ell~g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t-~~~ll~~l~~~~~  200 (302)
                      |||++|+|++|+.||...........+..  .....+.   ...+++.+.+||.+||. +|.+|++ +.++++       
T Consensus       216 lG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~---~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~-------  284 (350)
T cd05573         216 LGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPP---DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS-------  284 (350)
T ss_pred             cchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCC---CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc-------
Confidence            99999999999999998887776666665  2222222   23379999999999997 9999999 999999       


Q ss_pred             HHHHHhhhCCCCCCccccCCCccccchhhH
Q psy3574         201 RVAAVERKGGYNQQCDIWAHPFFKYDMSKR  230 (302)
Q Consensus       201 ~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~  230 (302)
                                         ||||+...+..
T Consensus       285 -------------------hp~~~~~~~~~  295 (350)
T cd05573         285 -------------------HPFFKGIDWEN  295 (350)
T ss_pred             -------------------CCCcCCCCHHH
Confidence                               99999766543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=2.8e-36  Score=266.56  Aligned_cols=197  Identities=20%  Similarity=0.235  Sum_probs=160.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. .++....   .+++..++.++.||+.||.|||++||+||||||    ++.++
T Consensus        58 Iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~  133 (325)
T cd05602          58 LVGLHFSFQTADKLYFVLDYINGGELF-YHLQRER---CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG  133 (325)
T ss_pred             CCceeEEEEcCCeEEEEEeCCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC
Confidence            456666554    58999999999999 7777666   789999999999999999999999999999999    78899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+++............+|++.|+|||++.   +..++.++|||||||++|+|++|..||.+.+.......+..
T Consensus       134 ~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  210 (325)
T cd05602         134 HIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLH---KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN  210 (325)
T ss_pred             CEEEccCCCCcccccCCCCcccccCCccccCHHHHc---CCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh
Confidence            999999999876543333344567999999999996   66788999999999999999999999998887777666655


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRV  231 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~  231 (302)
                      ....     ....++..+.++|.+||+.+|.+|+++.+.+.                      ++++|+||....|...
T Consensus       211 ~~~~-----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~----------------------~i~~~~~~~~~~~~~~  262 (325)
T cd05602         211 KPLQ-----LKPNITNSARHLLEGLLQKDRTKRLGAKDDFM----------------------EIKNHIFFSPINWDDL  262 (325)
T ss_pred             CCcC-----CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHH----------------------HHhcCcccCCCCHHHH
Confidence            3222     23467899999999999999999999763322                      3344999987666544

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0611|consensus

Probab=100.00  E-value=2.9e-36  Score=257.62  Aligned_cols=185  Identities=21%  Similarity=0.332  Sum_probs=166.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+.+|..|.    .+|||||..+|.|+ +++...+   .|+|.+++.|++||+.|+.|||+++++|||+|.    ++.++
T Consensus       115 II~IyEVFENkdKIvivMEYaS~GeLY-DYiSer~---~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~  190 (668)
T KOG0611|consen  115 IIQIYEVFENKDKIVIVMEYASGGELY-DYISERG---SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNN  190 (668)
T ss_pred             eeehhhhhcCCceEEEEEEecCCccHH-HHHHHhc---cccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCC
Confidence            456777777    48999999999999 8998888   899999999999999999999999999999999    99999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      ++||+|||++..+.+. ....++||++-|.+||++.   +..| ++.+|.|||||+||.|+.|..||.+.+....+.+|.
T Consensus       191 NiKIADFGLSNly~~~-kfLqTFCGSPLYASPEIvN---G~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs  266 (668)
T KOG0611|consen  191 NIKIADFGLSNLYADK-KFLQTFCGSPLYASPEIVN---GTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQIS  266 (668)
T ss_pred             Ceeeeccchhhhhccc-cHHHHhcCCcccCCccccC---CCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhh
Confidence            9999999999877765 5567899999999999996   6666 588999999999999999999999999999999998


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHh
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHR  199 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~  199 (302)
                      .+.+..|.-      +.++.-||+.||..||++|.|++++..+-|+.-
T Consensus       267 ~GaYrEP~~------PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNw  308 (668)
T KOG0611|consen  267 RGAYREPET------PSDASGLIRWMLMVNPERRATIEDIASHWWVNW  308 (668)
T ss_pred             cccccCCCC------CchHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence            887765532      567999999999999999999999999887643

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.4e-36  Score=269.30  Aligned_cols=195  Identities=22%  Similarity=0.349  Sum_probs=159.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|+||||++||+|. +++...+   .+++..++.++.||+.||+|||++||+||||||    ++.+|
T Consensus        63 iv~~~~~~~~~~~~~lv~E~~~~g~L~-~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~  138 (364)
T cd05599          63 VVKLYYSFQDENYLYLIMEYLPGGDMM-TLLMKKD---TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKG  138 (364)
T ss_pred             CcceEEEEEcCCeEEEEECCCCCcHHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC
Confidence            466666655    68999999999999 7777666   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccc--------------------------------------cccccccCcccchhhcccccccCC
Q psy3574          73 DVKLADFGVSAQITATIN--------------------------------------KRKSFIGTPYWMAPEVAAVERKGG  114 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~--------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~  114 (302)
                      .+||+|||++..+.....                                      .....+||+.|+|||++.   ...
T Consensus       139 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~  215 (364)
T cd05599         139 HIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFL---QTG  215 (364)
T ss_pred             CEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHc---CCC
Confidence            999999999875432110                                      011346999999999985   667


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC---HHHH
Q psy3574         115 YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT---ADKL  191 (302)
Q Consensus       115 ~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t---~~~l  191 (302)
                      ++.++|||||||++|+|++|..||.+.+.......+........ ......+++.+.+||.+||. +|.+|++   +.++
T Consensus       216 ~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~l  293 (364)
T cd05599         216 YNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQ-FPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEI  293 (364)
T ss_pred             CCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccC-CCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHH
Confidence            89999999999999999999999998888777666655432221 11223578999999999997 8999998   9999


Q ss_pred             HHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhH
Q psy3574         192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKR  230 (302)
Q Consensus       192 l~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~  230 (302)
                      ++                          ||||+...+..
T Consensus       294 l~--------------------------h~~~~~~~~~~  306 (364)
T cd05599         294 KS--------------------------HPFFKGVDWEH  306 (364)
T ss_pred             hc--------------------------CCCcCCCCHHH
Confidence            99                          99999876653

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.4e-36  Score=267.61  Aligned_cols=193  Identities=22%  Similarity=0.302  Sum_probs=162.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    .|+||||+++|+|. .++....   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        60 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  135 (318)
T cd05582          60 IVKLHYAFQTEGKLYLILDFLRGGDLF-TRLSKEV---MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG  135 (318)
T ss_pred             cccEEEEEEcCCEEEEEEcCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCC
Confidence            566766665    58999999999999 7776665   799999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++.............+|++.|+|||++.   ...++.++|||||||++|+|++|+.||...........+..
T Consensus       136 ~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~  212 (318)
T cd05582         136 HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN---RRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILK  212 (318)
T ss_pred             cEEEeeccCCcccCCCCCceecccCChhhcCHHHHc---CCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHc
Confidence            999999999877654433344567999999999985   56688999999999999999999999998887777766665


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC-----HHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT-----ADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t-----~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      ....     .+..++..+.++|++||+.||.+||+     +.+++.                          ||||....
T Consensus       213 ~~~~-----~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~--------------------------~~~~~~~~  261 (318)
T cd05582         213 AKLG-----MPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKR--------------------------HPFFSTID  261 (318)
T ss_pred             CCCC-----CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhC--------------------------CCCcCCCC
Confidence            4432     23557899999999999999999999     666777                          99999876


Q ss_pred             hhHH
Q psy3574         228 SKRV  231 (302)
Q Consensus       228 ~~~~  231 (302)
                      +...
T Consensus       262 ~~~~  265 (318)
T cd05582         262 WNKL  265 (318)
T ss_pred             HHHH
Confidence            5543

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0600|consensus

Probab=100.00  E-value=3.5e-36  Score=263.26  Aligned_cols=179  Identities=21%  Similarity=0.218  Sum_probs=153.8

Q ss_pred             hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      .+|+|+|||+. +|. -++...+  ..|++.+++-|++||+.||+|||++||+|||||.    ++.+|.+||+|||+|+.
T Consensus       192 siYlVFeYMdh-DL~-GLl~~p~--vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~  267 (560)
T KOG0600|consen  192 SIYLVFEYMDH-DLS-GLLSSPG--VKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARF  267 (560)
T ss_pred             eEEEEEecccc-hhh-hhhcCCC--cccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceee
Confidence            46899999998 888 6666643  3799999999999999999999999999999999    99999999999999997


Q ss_pred             cccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCC-
Q psy3574          85 ITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-  162 (302)
Q Consensus        85 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~-  162 (302)
                      ...... ..+..+-|.+|.|||++++  ...|+..+|+||+||||.||+.|++.|.+.+..+++.+|......|..... 
T Consensus       268 y~~~~~~~~T~rVvTLWYRpPELLLG--~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~  345 (560)
T KOG0600|consen  268 YTPSGSAPYTSRVVTLWYRPPELLLG--ATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP  345 (560)
T ss_pred             ccCCCCcccccceEEeeccChHHhcC--CcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc
Confidence            665432 3556678999999999984  556999999999999999999999999999999999999885443321100 


Q ss_pred             -----------------------CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         163 -----------------------KDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       163 -----------------------~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                             ...++..+.+|+..||..||.+|.|+.++|+
T Consensus       346 ~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  346 VSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             cccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence                                   1235788999999999999999999999999

>KOG0585|consensus

Probab=100.00  E-value=1.2e-36  Score=264.37  Aligned_cols=180  Identities=22%  Similarity=0.230  Sum_probs=150.2

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      +|||+|||..|.+. ..-..+.   .|++.+++.|++.++.||+|||.+||+||||||    ++.+|++||+|||.+...
T Consensus       185 ~YlVley~s~G~v~-w~p~d~~---els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~  260 (576)
T KOG0585|consen  185 LYLVLEYCSKGEVK-WCPPDKP---ELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEF  260 (576)
T ss_pred             eEEEEEeccCCccc-cCCCCcc---cccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeec
Confidence            59999999999987 3222221   399999999999999999999999999999999    888999999999999866


Q ss_pred             cc-----ccccccccccCcccchhhcccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC
Q psy3574          86 TA-----TINKRKSFIGTPYWMAPEVAAVERKG-GYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPA  159 (302)
Q Consensus        86 ~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~  159 (302)
                      ..     ........+||+.|+|||.+...... ..+.+.||||+||+||.|+.|+.||.+....+...+|.......|.
T Consensus       261 ~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~  340 (576)
T KOG0585|consen  261 PQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPE  340 (576)
T ss_pred             ccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCC
Confidence            22     22233446899999999999742222 2368899999999999999999999999999999999987666654


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         160 LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       160 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .   ..+...++|||.+||.+||+.|++..++..|+|
T Consensus       341 ~---pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw  374 (576)
T KOG0585|consen  341 N---PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW  374 (576)
T ss_pred             c---ccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence            3   356889999999999999999999999988333

>KOG0192|consensus

Probab=100.00  E-value=1.4e-35  Score=261.56  Aligned_cols=191  Identities=23%  Similarity=0.328  Sum_probs=158.9

Q ss_pred             Cchhhhcch-----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCC-CCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL-----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG-FKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~-----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-i~Hrdlkp----~~~   70 (302)
                      ||+|+|.-.     ++|||||+++|+|. .++... .+..++...+..++.+|++||+|||+++ |||||||+    ++.
T Consensus       101 IV~f~G~~~~~~~~~~iVtEy~~~GsL~-~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~  178 (362)
T KOG0192|consen  101 IVQFYGACTSPPGSLCIVTEYMPGGSLS-VLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDL  178 (362)
T ss_pred             eeeEEEEEcCCCCceEEEEEeCCCCcHH-HHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcC
Confidence            466666443     58999999999999 777763 1238999999999999999999999999 99999999    777


Q ss_pred             CC-CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          71 CG-DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        71 ~~-~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      .+ ++||+|||+++.............||..|||||++.+. ...|+.++||||||+++|||+||+.||.+.........
T Consensus       179 ~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~-~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~  257 (362)
T KOG0192|consen  179 KGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGE-KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASA  257 (362)
T ss_pred             CCCEEEECCCccceeeccccccccCCCCCccccChhhhcCC-CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence            76 99999999998776543333346799999999999633 56799999999999999999999999999988666666


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILI  197 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~  197 (302)
                      +...+..++.   +..+++.+..++.+||..||..||++.+++..+..
T Consensus       258 v~~~~~Rp~~---p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~  302 (362)
T KOG0192|consen  258 VVVGGLRPPI---PKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLES  302 (362)
T ss_pred             HHhcCCCCCC---CccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHH
Confidence            6655544433   34489999999999999999999999999885543

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=1.3e-35  Score=266.59  Aligned_cols=187  Identities=21%  Similarity=0.324  Sum_probs=151.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. .++...    .+++..+..++.||+.||+|||++||+||||||    ++.++
T Consensus       105 iv~~~~~~~~~~~~~lv~Ey~~gg~L~-~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~  179 (370)
T cd05596         105 IVQLHYAFQDDKYLYMVMEYMPGGDLV-NLMSNY----DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG  179 (370)
T ss_pred             cceEEEEEecCCEEEEEEcCCCCCcHH-HHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCC
Confidence            455555544    58999999999999 777654    488999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccc-cccccccCcccchhhcccccc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVER-KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||++........ .....+||+.|+|||++.+.. ...++.++|||||||++|+|++|+.||.+.+.......+
T Consensus       180 ~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i  259 (370)
T cd05596         180 HLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI  259 (370)
T ss_pred             CEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHH
Confidence            999999999976643221 223567999999999986322 234789999999999999999999999988877776666


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCC--CCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK--RPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~--R~t~~~ll~  193 (302)
                      ...... ...+....++.++.+||.+||+.+|.+  |++++++++
T Consensus       260 ~~~~~~-~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~  303 (370)
T cd05596         260 MDHKNS-LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS  303 (370)
T ss_pred             HcCCCc-CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence            553322 112223357999999999999999987  999999999

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0695|consensus

Probab=100.00  E-value=2.1e-36  Score=253.22  Aligned_cols=189  Identities=23%  Similarity=0.299  Sum_probs=159.6

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      +++|.||++||+|. .-++++.   +|+|+.++++..+|+.||+|||++||+.||+|.    ++..|+|||+|+|.++..
T Consensus       326 lffvieyv~ggdlm-fhmqrqr---klpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~  401 (593)
T KOG0695|consen  326 LFFVIEYVNGGDLM-FHMQRQR---KLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG  401 (593)
T ss_pred             EEEEEEEecCccee-eehhhhh---cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcC
Confidence            68999999999998 6666666   899999999999999999999999999999999    899999999999999987


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCC-------CCChHHHHHH-HHhcCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMF-------DLHPMRALFL-MSKSGFKP  157 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~-------~~~~~~~~~~-i~~~~~~~  157 (302)
                      -.......++|||+.|.|||++.   +..|+..+|||+|||+++||+.|+.||.       +.+..+.+.+ |...++..
T Consensus       402 l~~gd~tstfcgtpnyiapeilr---geeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiri  478 (593)
T KOG0695|consen  402 LGPGDTTSTFCGTPNYIAPEILR---GEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRI  478 (593)
T ss_pred             CCCCcccccccCCCcccchhhhc---ccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccc
Confidence            77667788999999999999995   8889999999999999999999999995       2233333333 33443333


Q ss_pred             CCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhH
Q psy3574         158 PALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKR  230 (302)
Q Consensus       158 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~  230 (302)
                           +..+|-.+..+++..|++||.+|..+.                    ...|..+|+.|+||+..+|.-
T Consensus       479 -----prslsvkas~vlkgflnkdp~erlgc~--------------------~~~g~~dik~h~ffr~idwd~  526 (593)
T KOG0695|consen  479 -----PRSLSVKASHVLKGFLNKDPKERLGCR--------------------PQTGFSDIKSHAFFRSIDWDL  526 (593)
T ss_pred             -----cceeehhhHHHHHHhhcCCcHHhcCCC--------------------cccchhhhhcchhhhhCCHHH
Confidence                 466788899999999999999998753                    235788999999998666543

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=4e-36  Score=270.71  Aligned_cols=184  Identities=23%  Similarity=0.323  Sum_probs=148.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|+|||||+||+|. +++...+   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        63 iv~~~~~~~~~~~~~lv~E~~~~g~L~-~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~  138 (376)
T cd05598          63 VVKLYYSFQDKDNLYFVMDYIPGGDMM-SLLIRLG---IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG  138 (376)
T ss_pred             cceEEEEEEcCCEEEEEEeCCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCC
Confidence            466666655    58999999999999 7777666   799999999999999999999999999999999    88899


Q ss_pred             CEEEecccccccccccc-------------------------------------------ccccccccCcccchhhcccc
Q psy3574          73 DVKLADFGVSAQITATI-------------------------------------------NKRKSFIGTPYWMAPEVAAV  109 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~-------------------------------------------~~~~~~~gt~~y~aPE~~~~  109 (302)
                      .+||+|||+|..+....                                           ......+||+.|+|||++. 
T Consensus       139 ~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-  217 (376)
T cd05598         139 HIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLL-  217 (376)
T ss_pred             CEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHc-
Confidence            99999999975321000                                           0012357999999999995 


Q ss_pred             cccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC---
Q psy3574         110 ERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP---  186 (302)
Q Consensus       110 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~---  186 (302)
                        +..++.++|||||||++|+|++|+.||.+.........+....... .......++.++.++|.+|+ .+|.+|+   
T Consensus       218 --~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~  293 (376)
T cd05598         218 --RTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTL-HIPSQAKLSREASDLILRLC-CGAEDRLGKN  293 (376)
T ss_pred             --CCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccc-cCCCCCCCCHHHHHHHHHHh-cCHhhcCCCC
Confidence              6678999999999999999999999999888776665554432221 11223467999999999976 5999999   


Q ss_pred             CHHHHHH
Q psy3574         187 TADKLLQ  193 (302)
Q Consensus       187 t~~~ll~  193 (302)
                      ++.++++
T Consensus       294 t~~ell~  300 (376)
T cd05598         294 GADEIKA  300 (376)
T ss_pred             CHHHHhC
Confidence            9999999

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=9.4e-36  Score=258.80  Aligned_cols=187  Identities=18%  Similarity=0.220  Sum_probs=147.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+.+ +|. .++...+  ..+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~~-~l~-~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~  140 (288)
T cd07871          65 IVTLHDIIHTERCLTLVFEYLDS-DLK-QYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG  140 (288)
T ss_pred             EeeEEEEEcCCCeEEEEEeCCCc-CHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC
Confidence            456666554    5899999986 888 5555433  1578899999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+++.............+++.|+|||++.  ....++.++|+||+||++|+|++|++||.+.+..+....+..
T Consensus       141 ~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~  218 (288)
T cd07871         141 ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLL--GSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFR  218 (288)
T ss_pred             CEEECcCcceeeccCCCccccCceecccccChHHhc--CCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            999999999876544333334457899999999985  235588999999999999999999999988777666655543


Q ss_pred             cCCCCCC-------------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPA-------------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~-------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....++.                         ......++.++.+||++||+.||.+|||++++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         219 LLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             HhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            2111110                         0011346789999999999999999999999999

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=5.9e-36  Score=264.03  Aligned_cols=181  Identities=18%  Similarity=0.224  Sum_probs=148.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    .|+||||++||+|. ..+....   .+++..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus        58 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~  133 (321)
T cd05603          58 LVGLHYSFQTAEKLYFVLDYVNGGELF-FHLQRER---CFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQG  133 (321)
T ss_pred             ccceeeEEEcCCEEEEEEcCCCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC
Confidence            466666554    58999999999998 6666655   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+++............+|++.|+|||++.   ...++.++|||||||++|+|++|..||...+.......+..
T Consensus       134 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  210 (321)
T cd05603         134 HVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLR---KEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH  210 (321)
T ss_pred             CEEEccCCCCccCCCCCCccccccCCcccCCHHHhc---CCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhc
Confidence            999999999876433323344567999999999985   66688999999999999999999999988877666666554


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHH----HHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD----KLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~----~ll~  193 (302)
                      ....     .+...+..+.++|.+||+.+|.+|+++.    ++++
T Consensus       211 ~~~~-----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~  250 (321)
T cd05603         211 KPLQ-----LPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKN  250 (321)
T ss_pred             CCCC-----CCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhC
Confidence            3222     2345688999999999999999999764    5555

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.4e-36  Score=268.74  Aligned_cols=184  Identities=22%  Similarity=0.303  Sum_probs=147.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|+||||++||+|. .++....   .+++..++.++.|++.||+|||++||+||||||    ++.++
T Consensus        63 iv~~~~~~~~~~~~~lv~E~~~gg~L~-~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~  138 (377)
T cd05629          63 VVSLYYSFQDAQYLYLIMEFLPGGDLM-TMLIKYD---TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGG  138 (377)
T ss_pred             cceEEEEEEcCCeeEEEEeCCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC
Confidence            567777665    69999999999999 7776665   799999999999999999999999999999999    78899


Q ss_pred             CEEEeccccccccccccc-----------------------------------------------cccccccCcccchhh
Q psy3574          73 DVKLADFGVSAQITATIN-----------------------------------------------KRKSFIGTPYWMAPE  105 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-----------------------------------------------~~~~~~gt~~y~aPE  105 (302)
                      .+||+|||+++.......                                               .....+||+.|+|||
T Consensus       139 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  218 (377)
T cd05629         139 HIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPE  218 (377)
T ss_pred             CEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHH
Confidence            999999999863321000                                               001246999999999


Q ss_pred             cccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCC
Q psy3574         106 VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR  185 (302)
Q Consensus       106 ~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R  185 (302)
                      ++.   ...++.++|||||||++|+|++|.+||.+.........+....... ..+....++.++.+||.+||. +|.+|
T Consensus       219 ~~~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~-~~p~~~~~s~~~~dli~~lL~-~~~~r  293 (377)
T cd05629         219 IFL---QQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETL-YFPDDIHLSVEAEDLIRRLIT-NAENR  293 (377)
T ss_pred             HHc---cCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCcc-CCCCCCCCCHHHHHHHHHHhc-CHhhc
Confidence            996   6678999999999999999999999998887776666665432111 122234578999999999997 67765


Q ss_pred             ---CCHHHHHH
Q psy3574         186 ---PTADKLLQ  193 (302)
Q Consensus       186 ---~t~~~ll~  193 (302)
                         +++.+++.
T Consensus       294 ~~r~~~~~~l~  304 (377)
T cd05629         294 LGRGGAHEIKS  304 (377)
T ss_pred             CCCCCHHHHhc
Confidence               59999999

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=1.1e-35  Score=268.53  Aligned_cols=184  Identities=24%  Similarity=0.359  Sum_probs=149.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    .|+|||||+||+|. .++...+   .+++..++.++.||+.||+|||++||+||||||    ++.+|
T Consensus        63 iv~~~~~~~~~~~~~lv~E~~~gg~L~-~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g  138 (382)
T cd05625          63 VVRLYYSFQDKDNLYFVMDYIPGGDMM-SLLIRMG---IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG  138 (382)
T ss_pred             CCeEEEEEEeCCEEEEEEeCCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            567777766    59999999999999 7776665   699999999999999999999999999999999    88899


Q ss_pred             CEEEecccccccccccc-----------------------------------------------ccccccccCcccchhh
Q psy3574          73 DVKLADFGVSAQITATI-----------------------------------------------NKRKSFIGTPYWMAPE  105 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~-----------------------------------------------~~~~~~~gt~~y~aPE  105 (302)
                      .+||+|||++..+....                                               ......+||+.|+|||
T Consensus       139 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE  218 (382)
T cd05625         139 HIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPE  218 (382)
T ss_pred             CEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHH
Confidence            99999999975321000                                               0012357999999999


Q ss_pred             cccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCC
Q psy3574         106 VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR  185 (302)
Q Consensus       106 ~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R  185 (302)
                      ++.   +..|+.++|||||||++|+|++|++||.+.+.......+........ ......+++++.++|.+|+ .+|.+|
T Consensus       219 ~~~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~-~p~~~~~s~~~~~li~~l~-~~p~~R  293 (382)
T cd05625         219 VLL---RTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLH-IPPQAKLSPEASDLIIKLC-RGPEDR  293 (382)
T ss_pred             Hhc---CCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcC-CCCcccCCHHHHHHHHHHc-cCHhHc
Confidence            996   66789999999999999999999999998887776666654332221 1223567999999999976 599999


Q ss_pred             CC---HHHHHH
Q psy3574         186 PT---ADKLLQ  193 (302)
Q Consensus       186 ~t---~~~ll~  193 (302)
                      ++   ++++++
T Consensus       294 ~~~~~~~ei~~  304 (382)
T cd05625         294 LGKNGADEIKA  304 (382)
T ss_pred             CCCCCHHHHhc
Confidence            97   999988

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=1.9e-35  Score=256.53  Aligned_cols=186  Identities=19%  Similarity=0.245  Sum_probs=147.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++++.+. .+.....   .+++..++.++.||+.||.|||+.||+||||||    ++.++
T Consensus        62 iv~~~~~~~~~~~~~lv~e~~~~~~l~-~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~  137 (287)
T cd07848          62 IVELKEAFRRRGKLYLVFEYVEKNMLE-LLEEMPN---GVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHND  137 (287)
T ss_pred             ccchhhhEecCCEEEEEEecCCCCHHH-HHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            567777665    58999999997776 6655444   699999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      .+||+|||++........ ......|++.|+|||++.   +..++.++|+||+||++|+|++|++||.+.+.......+.
T Consensus       138 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~  214 (287)
T cd07848         138 VLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLL---GAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQ  214 (287)
T ss_pred             cEEEeeccCcccccccccccccccccccccCCcHHHc---CCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            999999999987643221 223457899999999996   5568899999999999999999999998776655444333


Q ss_pred             hcCCCC-------------------CCCC--------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKP-------------------PALK--------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~-------------------~~~~--------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ......                   +...        ....++..+.+||++||+.||++|||++++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         215 KVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             HhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            211100                   0000        01236888999999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0577|consensus

Probab=100.00  E-value=1.7e-36  Score=269.35  Aligned_cols=193  Identities=35%  Similarity=0.628  Sum_probs=167.9

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+|||||-| +-. +++....  ++|.|.+|..|..+.+.||+|||+.+.||||||.    +.+.|.|||+|||.|...
T Consensus       101 aWLVMEYClG-SAs-DlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~  176 (948)
T KOG0577|consen  101 AWLVMEYCLG-SAS-DLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIM  176 (948)
T ss_pred             HHHHHHHHhc-cHH-HHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhc
Confidence            4899999987 766 7776544  4899999999999999999999999999999999    889999999999998765


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR  165 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  165 (302)
                      ..    .++++|||.|||||++.....+.|+-++||||||++..|+..+++|+++++....++.|.++..  |.+. ...
T Consensus       177 ~P----AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNes--PtLq-s~e  249 (948)
T KOG0577|consen  177 AP----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--PTLQ-SNE  249 (948)
T ss_pred             Cc----hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCC--CCCC-Cch
Confidence            43    4578999999999999877788899999999999999999999999999999999999998753  3333 366


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHHHHHhhhc
Q psy3574         166 WSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKV  239 (302)
Q Consensus       166 ~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~~  239 (302)
                      +|..++.|+..||++-|.+|||.+++|.                          |+|.....+....-+++++.
T Consensus       250 WS~~F~~Fvd~CLqKipqeRptse~ll~--------------------------H~fv~R~Rp~tvi~dLIqRT  297 (948)
T KOG0577|consen  250 WSDYFRNFVDSCLQKIPQERPTSEELLK--------------------------HRFVLRERPPTVIMDLIQRT  297 (948)
T ss_pred             hHHHHHHHHHHHHhhCcccCCcHHHHhh--------------------------cchhccCCCchHHHHHHHHH
Confidence            8999999999999999999999999999                          88877666655555555553

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.8e-35  Score=258.79  Aligned_cols=187  Identities=17%  Similarity=0.171  Sum_probs=140.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+.+ +|.+.+....+   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~  140 (303)
T cd07869          65 IVLLHDIIHTKETLTLVFEYVHT-DLCQYMDKHPG---GLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTG  140 (303)
T ss_pred             cCeEEEEEecCCeEEEEEECCCc-CHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence            456666554    5899999975 77734444344   689999999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM-RALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~  151 (302)
                      .+||+|||++..............+++.|+|||++.  ....++.++||||+||++|+|++|..||.+.... .....+.
T Consensus       141 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~  218 (303)
T cd07869         141 ELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLL--GSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIF  218 (303)
T ss_pred             CEEECCCCcceeccCCCccCCCCcccCCCCChHHHc--CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHH
Confidence            999999999876543323334457899999999985  2345788999999999999999999999875433 2222222


Q ss_pred             hcCCCCC----------------CC-----------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPP----------------AL-----------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~----------------~~-----------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....+.                ..           .....++..+.+||.+||+.||.+|||+.++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         219 LVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             HHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence            1100000                00           001124578999999999999999999999999

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=1.5e-35  Score=262.65  Aligned_cols=182  Identities=24%  Similarity=0.268  Sum_probs=144.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.|.    .|+||||++||+|. .++..+.   .+++..++.++.||+.||.|||++||+||||||    ++.++
T Consensus        67 i~~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~  142 (332)
T cd05614          67 LVTLHYAFQTEAKLHLILDYVSGGEMF-THLYQRD---NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG  142 (332)
T ss_pred             cccEEEEEecCCEEEEEEeCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC
Confidence            455665554    58999999999999 6666655   699999999999999999999999999999999    88889


Q ss_pred             CEEEecccccccccccc-ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----hHHHH
Q psy3574          73 DVKLADFGVSAQITATI-NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH----PMRAL  147 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~~  147 (302)
                      .+||+|||+++...... ......+||+.|+|||++.  ....++.++|||||||++|+|++|+.||....    .....
T Consensus       143 ~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~  220 (332)
T cd05614         143 HVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIR--GKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVS  220 (332)
T ss_pred             CEEEeeCcCCccccccCCCccccccCCccccCHHHhc--CCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHH
Confidence            99999999987654322 2233467999999999985  22347889999999999999999999996432    22222


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHH
Q psy3574         148 FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~  193 (302)
                      ..+....  +   ..+..++..+.++|.+||+.||++||     +++++++
T Consensus       221 ~~~~~~~--~---~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         221 RRILKCD--P---PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             HHHhcCC--C---CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence            2222221  1   22356789999999999999999999     7889999

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=2.5e-35  Score=265.96  Aligned_cols=196  Identities=23%  Similarity=0.334  Sum_probs=155.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|+||||++||+|. .++....   .+++..++.++.||+.||.|||++||+||||||    ++.++
T Consensus        63 iv~l~~~~~~~~~~~lv~E~~~gg~L~-~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~  138 (381)
T cd05626          63 VVKLYYSFQDKDNLYFVMDYIPGGDMM-SLLIRME---VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDG  138 (381)
T ss_pred             eeeeEEEEecCCEEEEEEecCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCC
Confidence            466776665    58999999999999 7777666   799999999999999999999999999999999    88899


Q ss_pred             CEEEecccccccccccc-----------------------------------------------ccccccccCcccchhh
Q psy3574          73 DVKLADFGVSAQITATI-----------------------------------------------NKRKSFIGTPYWMAPE  105 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~-----------------------------------------------~~~~~~~gt~~y~aPE  105 (302)
                      ++||+|||++.......                                               ......+||+.|+|||
T Consensus       139 ~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE  218 (381)
T cd05626         139 HIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPE  218 (381)
T ss_pred             CEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHH
Confidence            99999999975431100                                               0012457999999999


Q ss_pred             cccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhh--cCCC
Q psy3574         106 VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALT--KNPK  183 (302)
Q Consensus       106 ~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~--~dp~  183 (302)
                      ++.   +..++.++|||||||++|+|++|..||...+.......+...... ........+++++.+||.+|+.  .++.
T Consensus       219 ~~~---~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~s~~~~dli~~ll~~~~~~~  294 (381)
T cd05626         219 VLL---RKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENT-LHIPPQVKLSPEAVDLITKLCCSAEERL  294 (381)
T ss_pred             HHc---CCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccc-cCCCCCCCCCHHHHHHHHHHccCccccc
Confidence            995   566899999999999999999999999887776665555432211 1122234579999999999664  4555


Q ss_pred             CCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhH
Q psy3574         184 KRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKR  230 (302)
Q Consensus       184 ~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~  230 (302)
                      .|+++.++++                          ||||....+..
T Consensus       295 ~R~~~~~~l~--------------------------hp~f~~~~~~~  315 (381)
T cd05626         295 GRNGADDIKA--------------------------HPFFSEVDFSS  315 (381)
T ss_pred             CCCCHHHHhc--------------------------CcccCCCChhH
Confidence            6999999999                          99999776654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=1.1e-35  Score=263.23  Aligned_cols=198  Identities=24%  Similarity=0.343  Sum_probs=159.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhc-cccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      |+++++.+.    .|+||||++||+|. +++... .   .+++..++.++.||+.||+|||++||+||||||    ++.+
T Consensus        63 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~  138 (330)
T cd05601          63 IPQLQYAFQDKDNLYLVMEYQPGGDLL-SLLNRYED---QFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRT  138 (330)
T ss_pred             CcceeeEEecCCeEEEEECCCCCCCHH-HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCC
Confidence            345555443    58999999999999 777665 4   799999999999999999999999999999999    8889


Q ss_pred             CCEEEecccccccccccccc-ccccccCcccchhhcccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy3574          72 GDVKLADFGVSAQITATINK-RKSFIGTPYWMAPEVAAVER---KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRAL  147 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~---~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  147 (302)
                      |.+||+|||++..+...... .....||+.|+|||++....   ...++.++|||||||++|+|++|..||.........
T Consensus       139 ~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~  218 (330)
T cd05601         139 GHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTY  218 (330)
T ss_pred             CCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHH
Confidence            99999999999876543222 22346899999999985221   345788999999999999999999999888777766


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         148 FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       148 ~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      ..+...... ........++..+.+||.+||. +|.+||++.++++                          ||||+...
T Consensus       219 ~~i~~~~~~-~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~--------------------------h~~~~~~~  270 (330)
T cd05601         219 NNIMNFQRF-LKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC--------------------------HPFFSKID  270 (330)
T ss_pred             HHHHcCCCc-cCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC--------------------------CCCcCCCC
Confidence            666543321 1222234578999999999998 9999999999999                          99998766


Q ss_pred             hhH
Q psy3574         228 SKR  230 (302)
Q Consensus       228 ~~~  230 (302)
                      +..
T Consensus       271 ~~~  273 (330)
T cd05601         271 WNN  273 (330)
T ss_pred             HHH
Confidence            553

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0608|consensus

Probab=100.00  E-value=5.8e-36  Score=267.75  Aligned_cols=198  Identities=25%  Similarity=0.330  Sum_probs=162.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |||+|-.|+    +|+||+|++||++- .++.+.+   -|+|+.+++++.++..|+++.|+.|+|||||||    ++.+|
T Consensus       691 VVrLyySFQDkdnLYFVMdYIPGGDmM-SLLIrmg---IFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdG  766 (1034)
T KOG0608|consen  691 VVRLYYSFQDKDNLYFVMDYIPGGDMM-SLLIRMG---IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG  766 (1034)
T ss_pred             eEEEEEEeccCCceEEEEeccCCccHH-HHHHHhc---cCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCC
Confidence            688888888    59999999999999 5555555   599999999999999999999999999999999    99999


Q ss_pred             CEEEeccccccccccc------------------------------------------cccccccccCcccchhhccccc
Q psy3574          73 DVKLADFGVSAQITAT------------------------------------------INKRKSFIGTPYWMAPEVAAVE  110 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~------------------------------------------~~~~~~~~gt~~y~aPE~~~~~  110 (302)
                      +|||+|||++..+.-.                                          .......+||+.|+|||++.  
T Consensus       767 HIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~--  844 (1034)
T KOG0608|consen  767 HIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLA--  844 (1034)
T ss_pred             ceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhc--
Confidence            9999999999643100                                          00113467999999999996  


Q ss_pred             ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHH
Q psy3574         111 RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK  190 (302)
Q Consensus       111 ~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~  190 (302)
                       ..+|+..+||||.|||||||+.|++||....+.+...++.+.. .........+++.++.++|.++. ..++.|+    
T Consensus       845 -r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~-~~l~~~~~~~ls~e~~~li~kLc-~sad~RL----  917 (1034)
T KOG0608|consen  845 -RTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWR-NFLHIPYQGNLSKEALDLIQKLC-CSADSRL----  917 (1034)
T ss_pred             -ccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehh-hccccccccccCHHHHHHHHHHh-cChhhhh----
Confidence             7889999999999999999999999999888887777666544 22233445778999999998854 4566675    


Q ss_pred             HHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhH
Q psy3574         191 LLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKR  230 (302)
Q Consensus       191 ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~  230 (302)
                                         +..+.+++|.||||+..++..
T Consensus       918 -------------------Gkng~d~vKaHpfFkgIDfss  938 (1034)
T KOG0608|consen  918 -------------------GKNGADQVKAHPFFKGIDFSS  938 (1034)
T ss_pred             -------------------cccchhhhhcCccccccchHh
Confidence                               346677888899999887765

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=9.6e-36  Score=266.73  Aligned_cols=196  Identities=22%  Similarity=0.320  Sum_probs=157.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    +|+||||++||+|. .++....   .+++..++.++.|++.||+|||++||+||||||    ++.+|
T Consensus        63 iv~~~~~~~~~~~~~lv~E~~~gg~L~-~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~  138 (360)
T cd05627          63 VVKMFYSFQDKRNLYLIMEFLPGGDMM-TLLMKKD---TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKG  138 (360)
T ss_pred             EeeEEEEEEcCCEEEEEEeCCCCccHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC
Confidence            456666554    59999999999999 7777666   799999999999999999999999999999999    88899


Q ss_pred             CEEEecccccccccccc-----------------------------------ccccccccCcccchhhcccccccCCCCc
Q psy3574          73 DVKLADFGVSAQITATI-----------------------------------NKRKSFIGTPYWMAPEVAAVERKGGYNQ  117 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~-----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~  117 (302)
                      .+||+|||++..+....                                   ......+||+.|+|||++.   +..++.
T Consensus       139 ~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~  215 (360)
T cd05627         139 HVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFM---QTGYNK  215 (360)
T ss_pred             CEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHc---CCCCCC
Confidence            99999999987543210                                   0012357999999999996   667899


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC---HHHHHHH
Q psy3574         118 QCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT---ADKLLQV  194 (302)
Q Consensus       118 ~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t---~~~ll~~  194 (302)
                      ++|||||||++|+|++|+.||.+.........+........ ......++.++++||.+|+. +|.+|++   +.++++ 
T Consensus       216 ~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~-~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~-  292 (360)
T cd05627         216 LCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLV-FPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKS-  292 (360)
T ss_pred             cceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCcee-cCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc-
Confidence            99999999999999999999998888777666654322111 11123478999999999874 9999984   788888 


Q ss_pred             HHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHH
Q psy3574         195 ILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRV  231 (302)
Q Consensus       195 l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~  231 (302)
                                               ||||++..|...
T Consensus       293 -------------------------hp~f~~~~~~~~  304 (360)
T cd05627         293 -------------------------HPFFEGVDWGHI  304 (360)
T ss_pred             -------------------------CCCCCCCCHHHH
Confidence                                     999998777654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG4721|consensus

Probab=100.00  E-value=4e-36  Score=266.00  Aligned_cols=191  Identities=19%  Similarity=0.248  Sum_probs=165.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |++|-|...    ||||||||..|.|+ .+++.+.   ++.......+..+|+.|++|||.+.|||||||.    +..+.
T Consensus       174 II~FkGVCtqsPcyCIiMEfCa~GqL~-~VLka~~---~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d  249 (904)
T KOG4721|consen  174 IITFKGVCTQSPCYCIIMEFCAQGQLY-EVLKAGR---PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDD  249 (904)
T ss_pred             eeeEeeeecCCceeEEeeeccccccHH-HHHhccC---ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccc
Confidence            344555444    69999999999999 8999888   899999999999999999999999999999999    77788


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .|||+|||.++..... .....++||..|||||++.   ....+.++||||||||||||+||..||.+.+...+   |+-
T Consensus       250 ~VKIsDFGTS~e~~~~-STkMSFaGTVaWMAPEvIr---nePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI---IwG  322 (904)
T KOG4721|consen  250 VVKISDFGTSKELSDK-STKMSFAGTVAWMAPEVIR---NEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI---IWG  322 (904)
T ss_pred             eEEeccccchHhhhhh-hhhhhhhhhHhhhCHHHhh---cCCcccccceehhHHHHHHHHhcCCCccccchhee---EEe
Confidence            9999999999887765 5567889999999999995   77789999999999999999999999987655443   444


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARV  202 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~  202 (302)
                      .+.+...+..+..++..++-||++||+..|.+||++.++|.|+-++.+..
T Consensus       323 VGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pel  372 (904)
T KOG4721|consen  323 VGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPEL  372 (904)
T ss_pred             ccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHH
Confidence            45555666778899999999999999999999999999999998877654

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=3.5e-35  Score=263.78  Aligned_cols=187  Identities=21%  Similarity=0.324  Sum_probs=149.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    .|+||||++||+|. +++...    .+++.+++.++.||+.||+|||++||+||||||    ++.++
T Consensus       105 iv~~~~~~~~~~~~~lv~Ey~~gg~L~-~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~  179 (370)
T cd05621         105 VVQLFCAFQDDKYLYMVMEYMPGGDLV-NLMSNY----DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG  179 (370)
T ss_pred             EeeEEEEEEcCCEEEEEEcCCCCCcHH-HHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC
Confidence            456666554    59999999999999 777654    489999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccc-cccccccCcccchhhcccccc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVER-KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||++........ .....+||+.|+|||++.... ...++.++|+||+||++|+|++|..||.+.+.......+
T Consensus       180 ~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i  259 (370)
T cd05621         180 HLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKI  259 (370)
T ss_pred             CEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            999999999987643221 224567999999999986321 123788999999999999999999999988877777766


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCC--CCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK--RPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~--R~t~~~ll~  193 (302)
                      ....... ..+....++..++++|.+||..++.+  |+++.++++
T Consensus       260 ~~~~~~~-~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~  303 (370)
T cd05621         260 MDHKNSL-NFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ  303 (370)
T ss_pred             HhCCccc-CCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence            6543222 12222457899999999999855543  889999999

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=2.9e-35  Score=269.84  Aligned_cols=179  Identities=20%  Similarity=0.221  Sum_probs=139.8

Q ss_pred             heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC-CCEEEecccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC-GDVKLADFGVSA   83 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~-~~ikL~DFg~a~   83 (302)
                      +|+||||+++ +|. .++.. ...+..+++..++.++.||+.||+|||++||+||||||    ++.+ +.+||+|||+|+
T Consensus       142 l~lvmE~~~~-~l~-~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~  219 (440)
T PTZ00036        142 LNVVMEFIPQ-TVH-KYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAK  219 (440)
T ss_pred             EEEEEecCCc-cHH-HHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccch
Confidence            5799999987 666 44432 11123689999999999999999999999999999999    5544 579999999998


Q ss_pred             ccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC------
Q psy3574          84 QITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKP------  157 (302)
Q Consensus        84 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~------  157 (302)
                      .+... ......+||+.|+|||++.  ....|+.++||||+||++|+|++|.+||.+......+..+......+      
T Consensus       220 ~~~~~-~~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  296 (440)
T PTZ00036        220 NLLAG-QRSVSYICSRFYRAPELML--GATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLK  296 (440)
T ss_pred             hccCC-CCcccCCCCcCccCHHHhc--CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence            76543 2333567899999999985  23468999999999999999999999999887766666554421111      


Q ss_pred             -----------CCC-------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         158 -----------PAL-------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       158 -----------~~~-------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                 +..       ..+...+.++.+||.+||+.||.+|+|+.++++
T Consensus       297 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~  350 (440)
T PTZ00036        297 EMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA  350 (440)
T ss_pred             HhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence                       100       012346789999999999999999999999999

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=5.5e-35  Score=253.97  Aligned_cols=186  Identities=20%  Similarity=0.191  Sum_probs=148.1

Q ss_pred             Cchhhhcc---------hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----
Q psy3574           1 MSRVFNHF---------LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----   67 (302)
Q Consensus         1 iv~~~~~~---------~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----   67 (302)
                      ||++++.+         ..|+||||+.+ +|. .++.... ...+++..+..++.||+.||.|||++||+||||||    
T Consensus        66 iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil  142 (290)
T cd07862          66 VVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLT-TYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNIL  142 (290)
T ss_pred             cceEEEEEecccCCCCCcEEEEEccCCC-CHH-HHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEE
Confidence            46666644         26899999975 888 6665432 12588999999999999999999999999999999    


Q ss_pred             CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy3574          68 KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRAL  147 (302)
Q Consensus        68 ~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  147 (302)
                      ++.++.+||+|||++...... .......|++.|+|||++.   ...++.++||||+||++|+|++|++||.+....+.+
T Consensus       143 ~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~  218 (290)
T cd07862         143 VTSSGQIKLADFGLARIYSFQ-MALTSVVVTLWYRAPEVLL---QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL  218 (290)
T ss_pred             EcCCCCEEEccccceEeccCC-cccccccccccccChHHHh---CCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHH
Confidence            788899999999999765543 2334557899999999985   566889999999999999999999999988877776


Q ss_pred             HHHHhcCCCCCCC----------------------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         148 FLMSKSGFKPPAL----------------------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~~~~~----------------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+......+...                      .....++..+.+|+.+||+.||++|||+.++++
T Consensus       219 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         219 GKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             HHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            6665432111100                      011346788999999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-34  Score=255.43  Aligned_cols=201  Identities=18%  Similarity=0.283  Sum_probs=156.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      |+++++.|.    .|+||||++||+|. .++.. ..   .+++..++.++.||+.||+|||++||+||||||    ++.+
T Consensus        63 i~~~~~~~~~~~~~~lv~e~~~g~~L~-~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~  138 (331)
T cd05597          63 ITNLHYAFQDENNLYLVMDYYVGGDLL-TLLSKFED---RLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKN  138 (331)
T ss_pred             CCceEEEEecCCeEEEEEecCCCCcHH-HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCC
Confidence            345555444    58999999999999 77765 33   699999999999999999999999999999999    8889


Q ss_pred             CCEEEecccccccccccccc-ccccccCcccchhhcccccc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINK-RKSFIGTPYWMAPEVAAVER--KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF  148 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  148 (302)
                      +.+||+|||++......... ....+||+.|+|||++....  ...++.++||||+||++|+|++|+.||.+....+...
T Consensus       139 ~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~  218 (331)
T cd05597         139 GHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG  218 (331)
T ss_pred             CCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHH
Confidence            99999999998765443221 22346899999999985211  2346789999999999999999999998887777666


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCC--CCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccc
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK--RPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYD  226 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~--R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~  226 (302)
                      .+...............++..+++||++||..+++.  |+++.++++                          ||||...
T Consensus       219 ~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~--------------------------hp~~~~~  272 (331)
T cd05597         219 KIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD--------------------------HPFFEGI  272 (331)
T ss_pred             HHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhc--------------------------CCCCCCC
Confidence            665433222222223457999999999998654443  789999999                          9999876


Q ss_pred             hhhHH
Q psy3574         227 MSKRV  231 (302)
Q Consensus       227 ~~~~~  231 (302)
                      .+...
T Consensus       273 ~~~~~  277 (331)
T cd05597         273 DWDNI  277 (331)
T ss_pred             CHHHH
Confidence            66543

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0594|consensus

Probab=100.00  E-value=8.4e-35  Score=246.14  Aligned_cols=181  Identities=20%  Similarity=0.205  Sum_probs=150.7

Q ss_pred             hheeEEEecCCcchHHHHHHhcccc-ccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccc
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVGITA-IELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSA   83 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~   83 (302)
                      ..++|+||+.. +|. .++...... ..++...++.+++||+.||+|||+++|+||||||    +++.|.+||+|||+|+
T Consensus        91 ~l~lvfe~~d~-DL~-~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAr  168 (323)
T KOG0594|consen   91 KLYLVFEFLDR-DLK-KYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLAR  168 (323)
T ss_pred             eEEEEEEeecc-cHH-HHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHH
Confidence            46899999988 999 777664311 2477789999999999999999999999999999    8889999999999999


Q ss_pred             ccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC----
Q psy3574          84 QITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPA----  159 (302)
Q Consensus        84 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~----  159 (302)
                      ...-+.......++|.+|.|||++.+  ...|+..+|+||+||+++||+++++.|.+....+++..|...-..|..    
T Consensus       169 a~~ip~~~yt~evvTlWYRaPEvLlG--s~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp  246 (323)
T KOG0594|consen  169 AFSIPMRTYTPEVVTLWYRAPEVLLG--STSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWP  246 (323)
T ss_pred             HhcCCcccccccEEEeeccCHHHhcC--CCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCC
Confidence            77655555666789999999999984  345999999999999999999999999999999998888874333211    


Q ss_pred             --------------CC-------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         160 --------------LK-------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       160 --------------~~-------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                    ..       .....+....+++.+||+.+|.+|.|+..+|.
T Consensus       247 ~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~  301 (323)
T KOG0594|consen  247 GVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALT  301 (323)
T ss_pred             CccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhc
Confidence                          00       01123458999999999999999999999999

>KOG4645|consensus

Probab=100.00  E-value=2.3e-36  Score=288.27  Aligned_cols=185  Identities=24%  Similarity=0.371  Sum_probs=160.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      +|+|||.--    .+|-||||+||+|. +++..++   -.+|-..+.+..|++.|++|||++|||||||||    ++.+|
T Consensus      1296 lV~YyGVEvHRekv~IFMEyC~~GsLa-~ll~~gr---i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g 1371 (1509)
T KOG4645|consen 1296 LVRYYGVEVHREKVYIFMEYCEGGSLA-SLLEHGR---IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNG 1371 (1509)
T ss_pred             ccccCceeecHHHHHHHHHHhccCcHH-HHHHhcc---hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCC
Confidence            688888544    58999999999999 9998887   788999999999999999999999999999999    88999


Q ss_pred             CEEEeccccccccccccc----cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-ChHHHH
Q psy3574          73 DVKLADFGVSAQITATIN----KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL-HPMRAL  147 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-~~~~~~  147 (302)
                      .||++|||.|..+.+...    ......||+.|||||++.+..+++...++||||||||..||+||+.||... ++..+.
T Consensus      1372 ~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIM 1451 (1509)
T KOG4645|consen 1372 LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIM 1451 (1509)
T ss_pred             cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHH
Confidence            999999999988776531    234568999999999999877788899999999999999999999999765 455666


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         148 FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +++..+..+ .   .|.+++.+.+|||.+||..||++|.++.++++
T Consensus      1452 y~V~~gh~P-q---~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1452 YHVAAGHKP-Q---IPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred             hHHhccCCC-C---CchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence            666655432 2   24669999999999999999999999999999

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=1.8e-34  Score=259.24  Aligned_cols=187  Identities=21%  Similarity=0.339  Sum_probs=149.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. .++...    .+++..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus       105 iv~~~~~~~~~~~~~lv~Ey~~gg~L~-~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~  179 (371)
T cd05622         105 VVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNY----DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG  179 (371)
T ss_pred             CCeEEEEEEcCCEEEEEEcCCCCCcHH-HHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCC
Confidence            466676654    58999999999999 777654    489999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccc-cccccccCcccchhhcccccc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVER-KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||++........ .....+||+.|+|||++.... ...++.++|||||||++|+|++|..||...+.......+
T Consensus       180 ~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i  259 (371)
T cd05622         180 HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI  259 (371)
T ss_pred             CEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            999999999987654221 233567999999999986321 123789999999999999999999999988877777666


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCC--CCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK--RPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~--R~t~~~ll~  193 (302)
                      ...... ........++..++++|.+||..++.+  |++++++++
T Consensus       260 ~~~~~~-~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~  303 (371)
T cd05622         260 MNHKNS-LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  303 (371)
T ss_pred             HcCCCc-ccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhc
Confidence            654322 122233568999999999999843332  779999999

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=2.8e-34  Score=254.53  Aligned_cols=192  Identities=17%  Similarity=0.259  Sum_probs=153.9

Q ss_pred             heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      +|+||||++||+|. +++.. ..   .+++..++.++.||+.||.|||++||+||||||    ++.++.+||+|||++..
T Consensus        76 ~~lv~ey~~~g~L~-~~l~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~  151 (332)
T cd05623          76 LYLVMDYYVGGDLL-TLLSKFED---RLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLK  151 (332)
T ss_pred             EEEEEeccCCCcHH-HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchhee
Confidence            58999999999999 77765 34   689999999999999999999999999999999    88899999999999876


Q ss_pred             cccccc-cccccccCcccchhhccccc--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCC
Q psy3574          85 ITATIN-KRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK  161 (302)
Q Consensus        85 ~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  161 (302)
                      ...... .....+||+.|+|||++...  ....++.++|||||||++|+|++|+.||...+.......+.......+...
T Consensus       152 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~  231 (332)
T cd05623         152 LMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPA  231 (332)
T ss_pred             cccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCC
Confidence            543222 22335799999999998521  124578899999999999999999999998888777777765443322222


Q ss_pred             CCCCCCHHHHHHHHHhhhcCCCC--CCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHH
Q psy3574         162 DKDRWSSTFHNFVKIALTKNPKK--RPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRV  231 (302)
Q Consensus       162 ~~~~~s~~~~~li~~~L~~dp~~--R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~  231 (302)
                      ....++.++++||++||..++..  |+++.++++                          ||||....+...
T Consensus       232 ~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~--------------------------h~~f~~~~~~~~  277 (332)
T cd05623         232 QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQ--------------------------HPFFTGIDWDNI  277 (332)
T ss_pred             ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhC--------------------------CCCcCCCCHHHH
Confidence            33567999999999999665443  689999999                          999997766543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1e-34  Score=268.96  Aligned_cols=189  Identities=24%  Similarity=0.375  Sum_probs=156.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhc-cccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++|+.|.    +||||||++||+|. .++... ....++++..+..++.||+.||.|||++||+||||||    ++.+
T Consensus       127 iv~~~~~~~~~~~~~lv~E~~~gg~L~-~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~  205 (478)
T PTZ00267        127 IVKHFDDFKSDDKLLLIMEYGSGGDLN-KQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPT  205 (478)
T ss_pred             EeEEEEEEEECCEEEEEEECCCCCCHH-HHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCC
Confidence            577888766    59999999999999 555432 1123688999999999999999999999999999999    8889


Q ss_pred             CCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      +.+||+|||+++.......  .....+||+.|+|||++.   +..++.++|||||||++|+|++|+.||.+.........
T Consensus       206 ~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~  282 (478)
T PTZ00267        206 GIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWE---RKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQ  282 (478)
T ss_pred             CcEEEEeCcCceecCCccccccccccCCCccccCHhHhC---CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            9999999999987654321  234567999999999985   66789999999999999999999999988887777776


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILI  197 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~  197 (302)
                      +......+    .+..++..+.++|.+||..+|++||++.+++.+.|.
T Consensus       283 ~~~~~~~~----~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~  326 (478)
T PTZ00267        283 VLYGKYDP----FPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFL  326 (478)
T ss_pred             HHhCCCCC----CCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHH
Confidence            66554332    235678999999999999999999999999994443

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.1e-34  Score=257.38  Aligned_cols=178  Identities=19%  Similarity=0.233  Sum_probs=139.1

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      +|+|||||. ++|. .++....   .+++..++.++.||+.||.|||++||+||||||    ++.++.+||+|||+++..
T Consensus        79 ~~lv~e~~~-~~L~-~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859          79 IYVVFELME-SDLH-QVIKAND---DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA  153 (338)
T ss_pred             EEEEEecCC-CCHH-HHHHhcc---cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence            589999996 4888 7777665   799999999999999999999999999999999    888999999999999765


Q ss_pred             ccccc---cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-------
Q psy3574          86 TATIN---KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF-------  155 (302)
Q Consensus        86 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-------  155 (302)
                      .....   .....+|++.|+|||++.+. ...++.++|||||||++|+|++|++||.+.+.......+.....       
T Consensus       154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  232 (338)
T cd07859         154 FNDTPTAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETI  232 (338)
T ss_pred             ccccCccccccCCCCCCCcCCHHHHhcc-ccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence            33211   12345789999999998521 25688999999999999999999999987655433322211100       


Q ss_pred             -------------------CCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         156 -------------------KPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       156 -------------------~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                         ..+.......+++.+.++|.+||..||++||+++++++
T Consensus       233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~  289 (338)
T cd07859         233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA  289 (338)
T ss_pred             HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence                               00000112346788999999999999999999999999

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=1.8e-34  Score=247.78  Aligned_cols=189  Identities=65%  Similarity=0.999  Sum_probs=153.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++++|. +++...+   .+++.+++.++.|++.||+|||++|++|+||+|    ++.++
T Consensus        68 ii~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~  143 (267)
T cd06645          68 IVAYFGSYLRRDKLWICMEFCGGGSLQ-DIYHVTG---PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNG  143 (267)
T ss_pred             eeeEEEEEEeCCEEEEEEeccCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence            345555443    58999999999999 7777766   799999999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............|+..|+|||++.......++.++|+||+||++|+|++|..||....+.........
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~  223 (267)
T cd06645         144 HVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTK  223 (267)
T ss_pred             CEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhc
Confidence            99999999987665433333455789999999997433345578899999999999999999999977665555544444


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....++.......++..+.++|.+||..+|++||+++++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         224 SNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             cCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence            44444443333457889999999999999999999999999

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0596|consensus

Probab=100.00  E-value=3.8e-35  Score=259.10  Aligned_cols=186  Identities=18%  Similarity=0.250  Sum_probs=141.7

Q ss_pred             Cchhhhcc----hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---CCCCCC
Q psy3574           1 MSRVFNHF----LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~----~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---~~~~~~   73 (302)
                      ||.+||+-    ++||||||-+. +|. .+++++..  .++.-.++.+..|++.|++++|.+||||.||||   +--.|.
T Consensus       422 IIqL~DYEv~d~~lYmvmE~Gd~-DL~-kiL~k~~~--~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~  497 (677)
T KOG0596|consen  422 IIQLYDYEVTDGYLYMVMECGDI-DLN-KILKKKKS--IDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGR  497 (677)
T ss_pred             EEEEeeeeccCceEEEEeecccc-cHH-HHHHhccC--CCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeee
Confidence            35555543    36999997665 999 89988761  233248999999999999999999999999999   778899


Q ss_pred             EEEecccccccccccccc--ccccccCcccchhhcccccccC--------CCCchhhHHHHHHHHHHHHhCCCCCCCCC-
Q psy3574          74 VKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKG--------GYNQQCDIWAVGITAIELAELQPPMFDLH-  142 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~--------~~~~~~DiwslG~il~ell~g~~pf~~~~-  142 (302)
                      +||+|||+|..+..+...  ..+.+||+.||+||.+......        ..+.++||||||||||+|+.|++||.... 
T Consensus       498 LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n  577 (677)
T KOG0596|consen  498 LKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN  577 (677)
T ss_pred             EEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH
Confidence            999999999988765332  4567899999999999742111        24678999999999999999999997654 


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCC-CHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         143 PMRALFLMSKSGFKPPALKDKDRW-SSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       143 ~~~~~~~i~~~~~~~~~~~~~~~~-s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+..|...+-..+   ++..- ..++.++++.||.+||++||++.++|+
T Consensus       578 ~~aKl~aI~~P~~~Ie---fp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  578 QIAKLHAITDPNHEIE---FPDIPENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             HHHHHHhhcCCCcccc---ccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            3333333333222111   11111 234999999999999999999999999

>KOG0667|consensus

Probab=100.00  E-value=5.6e-35  Score=263.59  Aligned_cols=184  Identities=21%  Similarity=0.267  Sum_probs=154.1

Q ss_pred             Cchhhhcchh----eeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC------CCC
Q psy3574           1 MSRVFNHFLQ----VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD------KDR   70 (302)
Q Consensus         1 iv~~~~~~~~----~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp------~~~   70 (302)
                      +||+|++|..    |||+|.++- +|+ ++++.+. -.+|+...++.|+.||+.||.+||+.||||+||||      ...
T Consensus       250 ~Vrm~d~F~fr~HlciVfELL~~-NLY-ellK~n~-f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~  326 (586)
T KOG0667|consen  250 IVRMLDYFYFRNHLCIVFELLST-NLY-ELLKNNK-FRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPK  326 (586)
T ss_pred             EEEeeeccccccceeeeehhhhh-hHH-HHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCC
Confidence            6899999984    999999976 999 8887764 23688999999999999999999999999999999      344


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      ...|||+|||+|+.....   ..+++.++.|+|||+++   +..|+.+.|+||||||++||++|.+.|.+.+..+++..|
T Consensus       327 r~~vKVIDFGSSc~~~q~---vytYiQSRfYRAPEVIL---GlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I  400 (586)
T KOG0667|consen  327 RSRIKVIDFGSSCFESQR---VYTYIQSRFYRAPEVIL---GLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARI  400 (586)
T ss_pred             cCceeEEecccccccCCc---ceeeeeccccccchhhc---cCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHH
Confidence            558999999999887653   23788999999999998   888999999999999999999999999999999999888


Q ss_pred             HhcCCCCCC-----------------------------------------------CCCC-----------CCCCHHHHH
Q psy3574         151 SKSGFKPPA-----------------------------------------------LKDK-----------DRWSSTFHN  172 (302)
Q Consensus       151 ~~~~~~~~~-----------------------------------------------~~~~-----------~~~s~~~~~  172 (302)
                      ......||.                                               ...+           ..-...+.|
T Consensus       401 ~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~d  480 (586)
T KOG0667|consen  401 IEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFID  480 (586)
T ss_pred             HHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHH
Confidence            772211110                                               0000           011345799


Q ss_pred             HHHHhhhcCCCCCCCHHHHHH
Q psy3574         173 FVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       173 li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ||++||.+||.+|+|+.++|+
T Consensus       481 flk~~L~~dP~~R~tp~qal~  501 (586)
T KOG0667|consen  481 FLKRCLEWDPAERITPAQALN  501 (586)
T ss_pred             HHHHHhccCchhcCCHHHHhc
Confidence            999999999999999999999

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-34  Score=250.55  Aligned_cols=199  Identities=19%  Similarity=0.234  Sum_probs=155.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. ..+.... ...+++..+..++.|++.||.|||++|++||||+|    +++++
T Consensus        62 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~  139 (285)
T cd05605          62 VVSLAYAYETKDALCLVLTLMNGGDLK-FHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYG  139 (285)
T ss_pred             EeeeeeeecCCCeEEEEEeccCCCcHH-HHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCC
Confidence            345555443    68999999999998 5554332 12589999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .++|+|||++...... ......+|+..|+|||++.   +..++.++||||+||++|+|++|..||.+.........+..
T Consensus       140 ~~~l~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~---~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~  215 (285)
T cd05605         140 HIRISDLGLAVEIPEG-ETIRGRVGTVGYMAPEVVK---NERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVER  215 (285)
T ss_pred             CEEEeeCCCceecCCC-CccccccCCCCccCcHHhc---CCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHH
Confidence            9999999998765433 2223457899999999985   56688999999999999999999999987655433322222


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      .. .......+..++..+.+||.+||..||.+||     +++++++                          ||||....
T Consensus       216 ~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~--------------------------~~~~~~~~  268 (285)
T cd05605         216 RV-KEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA--------------------------HPFFRTAN  268 (285)
T ss_pred             Hh-hhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc--------------------------CcCccCCC
Confidence            11 1111122355789999999999999999999     8999999                          99999877


Q ss_pred             hhHHH
Q psy3574         228 SKRVA  232 (302)
Q Consensus       228 ~~~~~  232 (302)
                      +....
T Consensus       269 ~~~~~  273 (285)
T cd05605         269 FKRLE  273 (285)
T ss_pred             HHHHh
Confidence            66543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG4279|consensus

Probab=100.00  E-value=3.5e-35  Score=265.12  Aligned_cols=185  Identities=25%  Similarity=0.393  Sum_probs=155.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhc-cccccc--cccchhHHHhhHHHHHHHHHhCCCCCCCCcC-----C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVG-ITAIEL--AELQPPMFDLHPMRALFLMSKSGFKPPALKD-----K   68 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~-~~~~~l--~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-----~   68 (302)
                      ||+|.|.+-    +-|.||-++||+|. .+++.+ +   ++  +|.++.++.+||++||.|||++.|||||||-     .
T Consensus       634 IVrYLGs~senGf~kIFMEqVPGGSLS-sLLrskWG---PlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN  709 (1226)
T KOG4279|consen  634 IVRYLGSVSENGFFKIFMEQVPGGSLS-SLLRSKWG---PLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN  709 (1226)
T ss_pred             HHHHhhccCCCCeEEEEeecCCCCcHH-HHHHhccC---CCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe
Confidence            688887544    45899999999999 777665 4   77  8999999999999999999999999999999     4


Q ss_pred             CCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-hHHHH
Q psy3574          69 DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH-PMRAL  147 (302)
Q Consensus        69 ~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~~  147 (302)
                      .-.|.+||+|||.++.+..-..+..++.||..|||||++. ....+|+.++|||||||.+.||.||++||.... +...+
T Consensus       710 TySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvID-qG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM  788 (1226)
T KOG4279|consen  710 TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVID-QGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM  788 (1226)
T ss_pred             eccceEEecccccchhhccCCccccccccchhhhChHhhc-cCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh
Confidence            5679999999999999987767777899999999999995 234679999999999999999999999997643 33333


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         148 FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .++--...   ....+..++.++++||.+|+..+|..||++.++|.
T Consensus       789 FkVGmyKv---HP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  789 FKVGMYKV---HPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             hhhcceec---CCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence            33322222   23346788999999999999999999999999999

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1.5e-34  Score=249.83  Aligned_cols=200  Identities=16%  Similarity=0.173  Sum_probs=148.6

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.+.    .|+||||++||+|. .++.... ...+++..+..++.|++.||+|||+.||+||||||    ++.++.
T Consensus        56 ~~~~~~~~~~~~~~lv~e~~~g~~L~-~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~  133 (277)
T cd05607          56 VNLAYAFESKTHLCLVMSLMNGGDLK-YHIYNVG-ERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGN  133 (277)
T ss_pred             EEEEEEEecCCeEEEEEecCCCCCHH-HHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCC
Confidence            45555443    58999999999998 5554332 12588888999999999999999999999999999    888899


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      ++|+|||++....... ......|+..|+|||++.   ...++.++|+||+||++|+|++|+.||...........+...
T Consensus       134 ~~l~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~  209 (277)
T cd05607         134 CRLSDLGLAVELKDGK-TITQRAGTNGYMAPEILK---EEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRR  209 (277)
T ss_pred             EEEeeceeeeecCCCc-eeeccCCCCCccCHHHHc---cCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHH
Confidence            9999999987665432 223456899999999986   555899999999999999999999999764332111111111


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhh
Q psy3574         154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSK  229 (302)
Q Consensus       154 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~  229 (302)
                      ............++.++.++|.+||+.||++||++.++++                      ++..||||+...+.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~----------------------~~~~h~~f~~~~~~  263 (277)
T cd05607         210 TLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKND----------------------DPRKHEFFKTINFP  263 (277)
T ss_pred             hhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchh----------------------hhhcChhhcCCCHH
Confidence            1111111112457899999999999999999999955443                      22339999875554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=3.1e-34  Score=254.17  Aligned_cols=183  Identities=24%  Similarity=0.399  Sum_probs=146.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC-CCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS-GFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp----~~~~   71 (302)
                      ||++++.+.    .|+||||++||+|. +++....   .+++..+..++.|++.||.|||++ +|+||||||    ++.+
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~  140 (331)
T cd06649          65 IVGFYGAFYSDGEISICMEHMDGGSLD-QVLKEAK---RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSR  140 (331)
T ss_pred             CCeEEEEEEECCEEEEEeecCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCC
Confidence            567776654    58999999999999 7777666   799999999999999999999986 699999999    7888


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +.+||+|||++......  ......|+..|+|||++.   +..++.++|||||||++|+|++|+.||...+..+....+.
T Consensus       141 ~~~kl~Dfg~~~~~~~~--~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~  215 (331)
T cd06649         141 GEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQ---GTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFG  215 (331)
T ss_pred             CcEEEccCccccccccc--ccccCCCCcCcCCHhHhc---CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhc
Confidence            99999999998766432  233457899999999996   5668999999999999999999999997655443322111


Q ss_pred             hcC--------------------------------------------CCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC
Q psy3574         152 KSG--------------------------------------------FKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT  187 (302)
Q Consensus       152 ~~~--------------------------------------------~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t  187 (302)
                      ...                                            ...+. .....++.++++||.+||+.||++|||
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~L~~~P~~Rpt  294 (331)
T cd06649         216 RPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPK-LPNGVFTPDFQEFVNKCLIKNPAERAD  294 (331)
T ss_pred             ccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcC-CCCccccHHHHHHHHHHccCCcccCCC
Confidence            100                                            00000 011246889999999999999999999


Q ss_pred             HHHHHH
Q psy3574         188 ADKLLQ  193 (302)
Q Consensus       188 ~~~ll~  193 (302)
                      +.++++
T Consensus       295 ~~ell~  300 (331)
T cd06649         295 LKMLMN  300 (331)
T ss_pred             HHHHhc
Confidence            999999

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0983|consensus

Probab=100.00  E-value=7.8e-35  Score=237.42  Aligned_cols=185  Identities=28%  Similarity=0.437  Sum_probs=157.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhC-CCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKS-GFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp----~~~   70 (302)
                      ||+-||.|.    ++|.||.|.. -+. .++++ .+   +++|..+-++...++.||.||.++ ||+|||+||    ++.
T Consensus       153 IV~c~GyFi~n~dV~IcMelMs~-C~e-kLlkrik~---piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe  227 (391)
T KOG0983|consen  153 IVQCFGYFITNTDVFICMELMST-CAE-KLLKRIKG---PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE  227 (391)
T ss_pred             eeeeeeEEeeCchHHHHHHHHHH-HHH-HHHHHhcC---CchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEcc
Confidence            678888887    4899998854 555 44443 44   899999999999999999999976 899999999    899


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCC-CChHHHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFD-LHPMRALFL  149 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~-~~~~~~~~~  149 (302)
                      .|+|||||||++..+.+.... ....|.+.|||||-+.-.....|+..+||||||+.++||.||+.||.+ ....+.+.+
T Consensus       228 ~GniKlCDFGIsGrlvdSkAh-trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltk  306 (391)
T KOG0983|consen  228 RGNIKLCDFGISGRLVDSKAH-TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTK  306 (391)
T ss_pred             CCCEEeecccccceeeccccc-ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHH
Confidence            999999999999998876433 334689999999999755566799999999999999999999999986 456677777


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.+.  .+|.+.....+|+.+++|+..||.+|+.+||...++|+
T Consensus       307 vln~--ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  307 VLNE--EPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             HHhc--CCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence            7774  45666666679999999999999999999999999999

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=3.7e-34  Score=245.78  Aligned_cols=189  Identities=65%  Similarity=0.998  Sum_probs=153.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    +|+||||+++|+|. +++....   ++++..+..++.|++.||.|||++||+|||++|    ++.++
T Consensus        68 ii~~~~~~~~~~~~~iv~e~~~~~~L~-~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~  143 (267)
T cd06646          68 IVAYFGSYLSREKLWICMEYCGGGSLQ-DIYHVTG---PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNG  143 (267)
T ss_pred             eeeeeEEEEeCCEEEEEEeCCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC
Confidence            355555443    58999999999999 7777666   799999999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............|+..|+|||.+.......++.++|+||+||++|+|++|+.||....+......+..
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~  223 (267)
T cd06646         144 DVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  223 (267)
T ss_pred             CEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeec
Confidence            99999999998765433333455788999999998533345577899999999999999999999976665554444444


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....++.......++..+.+||.+||..+|++||+++++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  264 (267)
T cd06646         224 SNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLT  264 (267)
T ss_pred             CCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhc
Confidence            44444444444567899999999999999999999999999

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=2.5e-34  Score=265.98  Aligned_cols=173  Identities=17%  Similarity=0.172  Sum_probs=134.6

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh-CCCCCCCCcC----CCCCC------------
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK-SGFKPPALKD----KDRCG------------   72 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~i~Hrdlkp----~~~~~------------   72 (302)
                      +|+|||++ |++|. +++...+   .+++..++.++.||+.||+|||+ .||+||||||    ++..+            
T Consensus       207 ~~iv~~~~-g~~l~-~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~  281 (467)
T PTZ00284        207 MCIVMPKY-GPCLL-DWIMKHG---PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALP  281 (467)
T ss_pred             EEEEEecc-CCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccC
Confidence            68999988 55888 6666655   79999999999999999999998 5999999999    44333            


Q ss_pred             ----CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q psy3574          73 ----DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF  148 (302)
Q Consensus        73 ----~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  148 (302)
                          .+||+|||.+....   ......+||+.|+|||++.   +..|+.++|||||||++|||++|++||.+.+..+.+.
T Consensus       282 ~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~---~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~  355 (467)
T PTZ00284        282 PDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVL---GLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLH  355 (467)
T ss_pred             CCCceEEECCCCccccCc---cccccccCCccccCcHHhh---cCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence                59999999875432   2234568999999999996   6679999999999999999999999998877665554


Q ss_pred             HHHhcCCCCCCC-----------------------CC--------------CCCCCHHHHHHHHHhhhcCCCCCCCHHHH
Q psy3574         149 LMSKSGFKPPAL-----------------------KD--------------KDRWSSTFHNFVKIALTKNPKKRPTADKL  191 (302)
Q Consensus       149 ~i~~~~~~~~~~-----------------------~~--------------~~~~s~~~~~li~~~L~~dp~~R~t~~~l  191 (302)
                      .+.......+..                       ..              ....+..+.|||.+||++||.+|||++++
T Consensus       356 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~  435 (467)
T PTZ00284        356 LMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQM  435 (467)
T ss_pred             HHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHH
Confidence            443321111100                       00              00114567899999999999999999999


Q ss_pred             HH
Q psy3574         192 LQ  193 (302)
Q Consensus       192 l~  193 (302)
                      |+
T Consensus       436 L~  437 (467)
T PTZ00284        436 TT  437 (467)
T ss_pred             hc
Confidence            99

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=3.1e-34  Score=254.17  Aligned_cols=200  Identities=15%  Similarity=0.248  Sum_probs=156.1

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      +++++.+.    .|+||||++||+|. .++.. ..   .+++..++.++.|++.||+|||++||+||||||    ++.++
T Consensus        64 ~~l~~~~~~~~~~~lv~Ey~~gg~L~-~~l~~~~~---~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~  139 (331)
T cd05624          64 TTLHYAFQDENYLYLVMDYYVGGDLL-TLLSKFED---RLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNG  139 (331)
T ss_pred             eeEEEEEEcCCEEEEEEeCCCCCcHH-HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCC
Confidence            44444444    58999999999999 67665 34   689999999999999999999999999999999    88889


Q ss_pred             CEEEecccccccccccccc-ccccccCcccchhhcccccc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINK-RKSFIGTPYWMAPEVAAVER--KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      .+||+|||++......... ....+|++.|+|||++.+..  ...++.++|+||+||++|+|++|+.||...+..+....
T Consensus       140 ~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~  219 (331)
T cd05624         140 HIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK  219 (331)
T ss_pred             CEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHH
Confidence            9999999998766543221 22356999999999985211  13578899999999999999999999998887777666


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCC--CCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK--RPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~--R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      +.......+.......++..++++|.+||...+.+  |++++++++                          ||||+...
T Consensus       220 i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~--------------------------h~~f~~~~  273 (331)
T cd05624         220 IMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK--------------------------HAFFEGID  273 (331)
T ss_pred             HHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc--------------------------CCCcCCCC
Confidence            66543222222223457899999999999865544  468899998                          99999766


Q ss_pred             hhHH
Q psy3574         228 SKRV  231 (302)
Q Consensus       228 ~~~~  231 (302)
                      |...
T Consensus       274 ~~~~  277 (331)
T cd05624         274 WENI  277 (331)
T ss_pred             HHHH
Confidence            6543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=1e-33  Score=243.59  Aligned_cols=179  Identities=37%  Similarity=0.623  Sum_probs=144.8

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+.+|+|. .++.... ...+++..+..++.|++.||+|||+++|+|||++|    ++.++.+||+|||++...
T Consensus        84 ~~iv~e~~~~~~L~-~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~  161 (272)
T cd06637          84 LWLVMEFCGAGSVT-DLIKNTK-GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  161 (272)
T ss_pred             EEEEEEcCCCCcHH-HHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence            58999999999999 6666532 12688999999999999999999999999999999    888899999999998866


Q ss_pred             ccccccccccccCcccchhhcccccc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVER--KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDK  163 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  163 (302)
                      ...........|+..|+|||++.+..  ...++.++|+||+||++|+|++|+.||...........+.....   .....
T Consensus       162 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~  238 (272)
T cd06637         162 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA---PRLKS  238 (272)
T ss_pred             ccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCC---CCCCC
Confidence            54333344567899999999985321  34578899999999999999999999987666555544433221   11123


Q ss_pred             CCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         164 DRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       164 ~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..++..+.+||.+||..+|.+|||+.+++.
T Consensus       239 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         239 KKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             CCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            457889999999999999999999999999

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=6.1e-34  Score=247.09  Aligned_cols=177  Identities=21%  Similarity=0.190  Sum_probs=141.1

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .++||||+.+ +|. .++.... ...+++..++.++.|++.||.|||++||+||||||    ++.++.+||+|||++...
T Consensus        82 ~~lv~e~~~~-~l~-~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~  158 (288)
T cd07863          82 VTLVFEHVDQ-DLR-TYLDKVP-PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY  158 (288)
T ss_pred             EEEEEccccc-CHH-HHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence            5899999986 887 6665432 12589999999999999999999999999999999    888999999999998766


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC------
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPA------  159 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~------  159 (302)
                      ... .......|+..|+|||++.   +..++.++||||+||++|+|++|.+||.+.........+......+..      
T Consensus       159 ~~~-~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (288)
T cd07863         159 SCQ-MALTPVVVTLWYRAPEVLL---QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD  234 (288)
T ss_pred             cCc-ccCCCccccccccCchHhh---CCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccc
Confidence            533 2223456899999999985   566899999999999999999999999887766655554431110000      


Q ss_pred             ----------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         160 ----------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       160 ----------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                      ......++..+.++|.+||+.||++|||+.+++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         235 VTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             ccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence                            0011346788999999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG1989|consensus

Probab=100.00  E-value=4.9e-34  Score=264.93  Aligned_cols=192  Identities=18%  Similarity=0.253  Sum_probs=159.0

Q ss_pred             Cchhhh-----------cchheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCC--CCCCCCcC
Q psy3574           1 MSRVFN-----------HFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG--FKPPALKD   67 (302)
Q Consensus         1 iv~~~~-----------~~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--i~Hrdlkp   67 (302)
                      ||-|+|           .|.++|+||||.||.|- ++++.+.+. .|+|.++..|++++++|+++||...  |||||||-
T Consensus        97 IV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lv-d~mn~Rlq~-~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKi  174 (738)
T KOG1989|consen   97 IVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLV-DFMNTRLQT-RLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKI  174 (738)
T ss_pred             eeeEeccccccccCCCceeEEEeehhhccCCcHH-HHHHHHHhc-cCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhh
Confidence            566777           46678999999999999 888765433 5999999999999999999999998  99999999


Q ss_pred             ----CCCCCCEEEecccccccccccccc---------ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhC
Q psy3574          68 ----KDRCGDVKLADFGVSAQITATINK---------RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAEL  134 (302)
Q Consensus        68 ----~~~~~~ikL~DFg~a~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g  134 (302)
                          +..+|++||||||.|.........         .-....|+.|+|||++...++...+.++|||||||+||.|+..
T Consensus       175 ENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~  254 (738)
T KOG1989|consen  175 ENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYF  254 (738)
T ss_pred             hheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHh
Confidence                889999999999998754332211         1122469999999999877888899999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHH
Q psy3574         135 QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRAR  201 (302)
Q Consensus       135 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~  201 (302)
                      ..||.+....    .|....+..|..   ..++..+++||+.||+.||.+||++.+++..++.....
T Consensus       255 t~PFe~sg~l----aIlng~Y~~P~~---p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~  314 (738)
T KOG1989|consen  255 TTPFEESGKL----AILNGNYSFPPF---PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK  314 (738)
T ss_pred             CCCcCcCcce----eEEeccccCCCC---ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence            9999765332    455666666653   57899999999999999999999999999977755543

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=7.9e-34  Score=263.54  Aligned_cols=179  Identities=22%  Similarity=0.361  Sum_probs=149.0

Q ss_pred             heeEEEecCCcchHHHHHHhc-cccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      +++||||+++|+|. +++... .....+++..+..++.|++.||.|||++||+||||||    ++.++.+||+|||+++.
T Consensus       114 i~lV~Ey~~~gsL~-~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~  192 (496)
T PTZ00283        114 IALVLDYANAGDLR-QEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKM  192 (496)
T ss_pred             EEEEEeCCCCCcHH-HHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCee
Confidence            57999999999999 655432 2223689999999999999999999999999999999    88899999999999976


Q ss_pred             ccccc--ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCC
Q psy3574          85 ITATI--NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD  162 (302)
Q Consensus        85 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  162 (302)
                      .....  ......+||+.|+|||++.   +..++.++|||||||++|+|++|+.||.+.+.......+......+    .
T Consensus       193 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~---~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~----~  265 (496)
T PTZ00283        193 YAATVSDDVGRTFCGTPYYVAPEIWR---RKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDP----L  265 (496)
T ss_pred             ccccccccccccccCCcceeCHHHhC---CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCC----C
Confidence            54321  2234567999999999995   6668999999999999999999999999887777666665543322    2


Q ss_pred             CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         163 KDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       163 ~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      +..+++++.+++.+||..||.+||++.+++++.+
T Consensus       266 ~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~  299 (496)
T PTZ00283        266 PPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPI  299 (496)
T ss_pred             CCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHH
Confidence            4567999999999999999999999999999443

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=1.8e-33  Score=243.83  Aligned_cols=185  Identities=11%  Similarity=0.084  Sum_probs=153.0

Q ss_pred             Cchhhhcc--------hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC-CCCCCCCcC----
Q psy3574           1 MSRVFNHF--------LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS-GFKPPALKD----   67 (302)
Q Consensus         1 iv~~~~~~--------~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp----   67 (302)
                      ||++++.+        .+++||||++||+|. +++....   .+++.....++.|++.||.|||+. +++||||||    
T Consensus        80 Iv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~-~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nil  155 (283)
T PHA02988         80 ILKIYGFIIDIVDDLPRLSLILEYCTRGYLR-EVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFL  155 (283)
T ss_pred             EEEEeeeEEecccCCCceEEEEEeCCCCcHH-HHHhhCC---CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEE
Confidence            56777654        348999999999999 7777665   789999999999999999999985 999999999    


Q ss_pred             CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy3574          68 KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRAL  147 (302)
Q Consensus        68 ~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  147 (302)
                      ++.++.+||+|||+++.....   .....|+..|+|||++.+. ...++.++|||||||++|+|++|+.||.+.+..+..
T Consensus       156 l~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~  231 (283)
T PHA02988        156 VTENYKLKIICHGLEKILSSP---PFKNVNFMVYFSYKMLNDI-FSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIY  231 (283)
T ss_pred             ECCCCcEEEcccchHhhhccc---cccccCcccccCHHHhhhc-cccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence            788899999999998765432   1234688999999998521 256899999999999999999999999988877777


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         148 FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       148 ~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ..+......++   .+..++..+.+++.+||+.||++|||+.++++.+-
T Consensus       232 ~~i~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~  277 (283)
T PHA02988        232 DLIINKNNSLK---LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLS  277 (283)
T ss_pred             HHHHhcCCCCC---CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence            66655443332   23457899999999999999999999999998553

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1.1e-33  Score=248.18  Aligned_cols=187  Identities=19%  Similarity=0.232  Sum_probs=144.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++ +|. .++...+  ..+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        66 iv~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~  141 (309)
T cd07872          66 IVTLHDIVHTDKSLTLVFEYLDK-DLK-QYMDDCG--NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERG  141 (309)
T ss_pred             cceEEEEEeeCCeEEEEEeCCCC-CHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence            456666554    5899999987 777 4444332  1588899999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............++..|+|||++.  ....++.++||||+||++|+|++|++||.+.+..+....+..
T Consensus       142 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~  219 (309)
T cd07872         142 ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLL--GSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFR  219 (309)
T ss_pred             CEEECccccceecCCCccccccccccccccCCHHHh--CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            999999999876544333333456789999999985  234578999999999999999999999987766555444332


Q ss_pred             cCCCC-------------------CC------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKP-------------------PA------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~-------------------~~------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+                   +.      ......++.++.+||.+||+.||.+|||+.++++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         220 LLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             HhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence            11100                   00      0112346889999999999999999999999999

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.3e-33  Score=255.07  Aligned_cols=185  Identities=22%  Similarity=0.289  Sum_probs=140.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    .|+|+|++. ++|. .++....   .+++..++.++.||+.||.|||++||+||||||    ++..+
T Consensus       145 Iv~~~~~~~~~~~~~lv~e~~~-~~L~-~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~  219 (391)
T PHA03212        145 IIQLKGTFTYNKFTCLILPRYK-TDLY-CYLAAKR---NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPG  219 (391)
T ss_pred             CCCEeEEEEECCeeEEEEecCC-CCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCC
Confidence            577877665    589999996 4888 6666555   689999999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccc-cccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------hH
Q psy3574          73 DVKLADFGVSAQITAT-INKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH-------PM  144 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-------~~  144 (302)
                      .+||+|||+++..... .......+||+.|+|||++.   +..++.++|||||||++|+|++|..||....       ..
T Consensus       220 ~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~  296 (391)
T PHA03212        220 DVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLA---RDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSD  296 (391)
T ss_pred             CEEEEeCCcccccccccccccccccCccCCCChhhhc---CCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchh
Confidence            9999999998754322 12233467999999999996   5678999999999999999999998876432       11


Q ss_pred             HHHHHHHhcCCCCC------------------------------CCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         145 RALFLMSKSGFKPP------------------------------ALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       145 ~~~~~i~~~~~~~~------------------------------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+..+.......+                              .......++.++.+||.+||..||.+|||++++|+
T Consensus       297 ~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        297 RQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             HHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence            11222211110000                              00001124668999999999999999999999999

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.7e-33  Score=242.18  Aligned_cols=188  Identities=41%  Similarity=0.670  Sum_probs=151.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++++|. .++....  ..+++..++.++.|++.||.|||++||+|+||+|    ++.++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~  140 (280)
T cd06611          64 IVGLYEAYFYENKLWILIEFCDGGALD-SIMLELE--RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDG  140 (280)
T ss_pred             eeEEEEEEecCCeEEEEeeccCCCcHH-HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCC
Confidence            355666554    58999999999999 6665532  2699999999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhccccc--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      .++|+|||++..............++..|+|||.+...  ....++.++|+||+||++|+|++|+.||...........+
T Consensus       141 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~  220 (280)
T cd06611         141 DVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKI  220 (280)
T ss_pred             CEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHH
Confidence            99999999987655433333445689999999998532  1344678999999999999999999999887776665555


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...  ..+....+..++..+.++|.+||..+|.+||++.++++
T Consensus       221 ~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (280)
T cd06611         221 LKS--EPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK  261 (280)
T ss_pred             hcC--CCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence            443  22333345568899999999999999999999999999

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=7.3e-34  Score=253.91  Aligned_cols=184  Identities=21%  Similarity=0.237  Sum_probs=140.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    +|+||||+++|+|. ..    .   .+.+..+..++.||+.||+|||++||+||||||    ++.++
T Consensus       134 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~----~---~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~  205 (353)
T PLN00034        134 VVKCHDMFDHNGEIQVLLEFMDGGSLE-GT----H---IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAK  205 (353)
T ss_pred             cceeeeEeccCCeEEEEEecCCCCccc-cc----c---cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC
Confidence            567777665    58999999999987 31    1   356778889999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhccccc--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||++..+...........|+..|+|||++...  .+...+.++|||||||++|+|++|+.||...........+
T Consensus       206 ~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~  285 (353)
T PLN00034        206 NVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLM  285 (353)
T ss_pred             CEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHH
Confidence            99999999998765443333456799999999997421  1233456899999999999999999999743322211111


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...... .....+..++.++.+||.+||..||++||++.++++
T Consensus       286 ~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~  327 (353)
T PLN00034        286 CAICMS-QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQ  327 (353)
T ss_pred             HHHhcc-CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            111101 111223567899999999999999999999999999

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=2.8e-33  Score=242.34  Aligned_cols=187  Identities=40%  Similarity=0.647  Sum_probs=150.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      |+++++.+.    .|+|+||+++|+|. .++.. ..   ++++..+..++.|++.||.|||+.|++||||+|    ++.+
T Consensus        64 ii~~~~~~~~~~~~~~v~e~~~~~~l~-~~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~  139 (282)
T cd06643          64 IVKLLDAFYYENNLWILIEFCAGGAVD-AVMLELER---PLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLD  139 (282)
T ss_pred             eeeEEEEEeeCCEEEEEEEecCCCcHH-HHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccC
Confidence            345555544    58999999999998 55543 34   799999999999999999999999999999999    7788


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhccccc--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      +.+||+|||++..............++..|+|||++.+.  ....++.++|+||+||++|+|++|++||...+.......
T Consensus       140 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~  219 (282)
T cd06643         140 GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLK  219 (282)
T ss_pred             CCEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHH
Confidence            999999999987655433333455789999999998421  234577899999999999999999999988776665555


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +....  .+....+..++..+.+||.+||+.+|.+||++.++++
T Consensus       220 ~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         220 IAKSE--PPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             HhhcC--CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            54432  2222334567899999999999999999999999999

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1.9e-33  Score=243.33  Aligned_cols=188  Identities=37%  Similarity=0.611  Sum_probs=148.3

Q ss_pred             Cchhhhcc----------hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---
Q psy3574           1 MSRVFNHF----------LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---   67 (302)
Q Consensus         1 iv~~~~~~----------~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---   67 (302)
                      |+++++.|          ..|+||||+.+|+|. .++.... ...+++..+..++.||+.||+|||++|++|||++|   
T Consensus        75 i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~-~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~ni  152 (282)
T cd06636          75 IATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVT-DLVKNTK-GNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNV  152 (282)
T ss_pred             EEEEeeehhcccccCCCCEEEEEEEeCCCCcHH-HHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHE
Confidence            45666655          358999999999999 6665432 12588888999999999999999999999999999   


Q ss_pred             -CCCCCCEEEeccccccccccccccccccccCcccchhhccccc--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH
Q psy3574          68 -KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM  144 (302)
Q Consensus        68 -~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  144 (302)
                       ++.++.++|+|||++..............|+..|+|||.+...  ....++.++|+|||||++|+|++|..||......
T Consensus       153 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~  232 (282)
T cd06636         153 LLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM  232 (282)
T ss_pred             EECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH
Confidence             8888999999999987654433333456789999999998522  1345788999999999999999999999876655


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         145 RALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       145 ~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....+....   +.......++..+.+||.+||..||.+||++.++++
T Consensus       233 ~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         233 RALFLIPRNP---PPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             hhhhhHhhCC---CCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            5444333321   111223457899999999999999999999999999

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.5e-33  Score=239.01  Aligned_cols=183  Identities=27%  Similarity=0.479  Sum_probs=150.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+|+||++|++|. +++....   .+++..++.++.|++.||.|||+.|++||||+|    ++.++
T Consensus        66 i~~~~~~~~~~~~~~~v~e~~~~~~l~-~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~  141 (263)
T cd06625          66 IVQYYGCLRDDETLSIFMEYMPGGSVK-DQLKAYG---ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAG  141 (263)
T ss_pred             eeeeEEEEccCCeEEEEEEECCCCcHH-HHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            456666655    58999999999999 7777666   799999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccc---cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKR---KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      .++|+|||.+..........   ....++..|+|||.+.   +..++.++|+||+|+++|+|++|+.||...........
T Consensus       142 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~  218 (263)
T cd06625         142 NVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVIS---GEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFK  218 (263)
T ss_pred             CEEEeecccceeccccccccccccCCCcCccccCcceec---cCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHH
Confidence            99999999987654321111   2346788999999996   55588999999999999999999999987766665555


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +......   ...+..++..+.++|.+||..+|.+|||+.++++
T Consensus       219 ~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  259 (263)
T cd06625         219 IATQPTN---PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLR  259 (263)
T ss_pred             HhccCCC---CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence            4443222   2234568899999999999999999999999999

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=2.1e-33  Score=251.93  Aligned_cols=173  Identities=19%  Similarity=0.214  Sum_probs=137.5

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+.+ +|. ..+..     .+++..+..++.|++.||+|||++||+||||||    ++.++.+||+|||+++..
T Consensus       104 ~~lv~e~~~~-~l~-~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~  176 (364)
T cd07875         104 VYIVMELMDA-NLC-QVIQM-----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  176 (364)
T ss_pred             EEEEEeCCCC-CHH-HHHHh-----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence            5899999987 666 44432     477889999999999999999999999999999    888999999999999765


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC-------
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP-------  158 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-------  158 (302)
                      ... .......|+..|+|||++.   +..++.++|||||||++|+|++|+.||.+.+.......+......+.       
T Consensus       177 ~~~-~~~~~~~~t~~y~aPE~~~---~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (364)
T cd07875         177 GTS-FMMTPYVVTRYYRAPEVIL---GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL  252 (364)
T ss_pred             CCC-CcccCCcccCCcCCHHHHh---CCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence            443 2234457899999999996   66789999999999999999999999988776665555433111100       


Q ss_pred             ------------C------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         159 ------------A------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       159 ------------~------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                  .                  .......+..+++||.+||+.||.+|||+.++|+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~  317 (364)
T cd07875         253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  317 (364)
T ss_pred             hHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                        0                  0001123567899999999999999999999999

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=1.8e-33  Score=243.44  Aligned_cols=172  Identities=17%  Similarity=0.229  Sum_probs=139.0

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+.||+|. .++...+   .+++..+..++.|++.||.|||++||+||||||    ++.++.++|+|||++...
T Consensus        72 ~~lv~e~~~~~~L~-~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~  147 (279)
T cd05633          72 LCFILDLMNGGDLH-YHLSQHG---VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF  147 (279)
T ss_pred             EEEEEecCCCCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceec
Confidence            58999999999998 7777666   799999999999999999999999999999999    778899999999998765


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHhcCCCCCCCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM--RALFLMSKSGFKPPALKDK  163 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~  163 (302)
                      ....  .....|+..|+|||.+.  .+..++.++|+||+||++|+|++|..||......  ........   . .....+
T Consensus       148 ~~~~--~~~~~~~~~y~aPE~~~--~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---~-~~~~~~  219 (279)
T cd05633         148 SKKK--PHASVGTHGYMAPEVLQ--KGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL---T-VNVELP  219 (279)
T ss_pred             cccC--ccCcCCCcCccCHHHhc--CCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh---c-CCcCCc
Confidence            4321  22346899999999985  2455789999999999999999999999754322  11111111   1 111234


Q ss_pred             CCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHH
Q psy3574         164 DRWSSTFHNFVKIALTKNPKKRP-----TADKLLQ  193 (302)
Q Consensus       164 ~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~  193 (302)
                      ..++.++.++|.+||..||.+|+     ++.++++
T Consensus       220 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~  254 (279)
T cd05633         220 DSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE  254 (279)
T ss_pred             cccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence            56789999999999999999999     5999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=1.4e-33  Score=242.45  Aligned_cols=180  Identities=20%  Similarity=0.217  Sum_probs=144.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.|.    +|+||||++||+|. .++..+.   .+++.+++.++.|++.||.|||+.|++||||+|    ++.++
T Consensus        71 iv~~~~~~~~~~~~~iv~e~~~~~~L~-~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~  146 (267)
T PHA03390         71 FIKLYYSVTTLKGHVLIMDYIKDGDLF-DLLKKEG---KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK  146 (267)
T ss_pred             EEEEEEEEecCCeeEEEEEcCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC
Confidence            355665554    69999999999999 7887766   799999999999999999999999999999999    66666


Q ss_pred             -CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHH
Q psy3574          73 -DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRAL-FLM  150 (302)
Q Consensus        73 -~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~i  150 (302)
                       .++|+|||++......    ....++..|+|||++.   +..++.++|+||+||++|+|++|..||......... ...
T Consensus       147 ~~~~l~dfg~~~~~~~~----~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~  219 (267)
T PHA03390        147 DRIYLCDYGLCKIIGTP----SCYDGTLDYFSPEKIK---GHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESL  219 (267)
T ss_pred             CeEEEecCccceecCCC----ccCCCCCcccChhhhc---CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHH
Confidence             9999999998765432    2346889999999995   566889999999999999999999999755433211 111


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC-HHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT-ADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t-~~~ll~  193 (302)
                      ....  .........++..+.+||.+||+.+|.+|++ ++++++
T Consensus       220 ~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        220 LKRQ--QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             HHhh--cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            1111  1111223468999999999999999999996 699999

>KOG0197|consensus

Probab=100.00  E-value=1.4e-33  Score=249.39  Aligned_cols=184  Identities=18%  Similarity=0.205  Sum_probs=156.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |||+|+.-.    +|||||||+.|+|. ++++... +..+...+...++.||++|++||+++++|||||..    +++++
T Consensus       263 lV~l~gV~~~~~piyIVtE~m~~GsLl-~yLr~~~-~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~  340 (468)
T KOG0197|consen  263 LVKLYGVCTKQEPIYIVTEYMPKGSLL-DYLRTRE-GGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDL  340 (468)
T ss_pred             eEEEEEEEecCCceEEEEEecccCcHH-HHhhhcC-CCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCc
Confidence            688888766    49999999999999 7777622 23789999999999999999999999999999999    89999


Q ss_pred             CEEEeccccccccccccccc-cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKR-KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||+|+...+..-.. ...--...|.|||.+.   ...|+.++|||||||+|+||+| |+.||.++...+.+..+
T Consensus       341 ~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~---~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~l  417 (468)
T KOG0197|consen  341 VVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALN---YGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELL  417 (468)
T ss_pred             eEEEcccccccccCCCceeecCCCCCCceecCHHHHh---hCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHH
Confidence            99999999999554432211 1112255699999996   7779999999999999999999 99999999999999888


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .++...+.    |..+++++.+++..||..+|++|||++.+..
T Consensus       418 e~GyRlp~----P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~  456 (468)
T KOG0197|consen  418 ERGYRLPR----PEGCPDEVYELMKSCWHEDPEDRPTFETLRE  456 (468)
T ss_pred             hccCcCCC----CCCCCHHHHHHHHHHhhCCcccCCCHHHHHH
Confidence            87654433    5789999999999999999999999997765

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.1e-33  Score=245.50  Aligned_cols=174  Identities=20%  Similarity=0.226  Sum_probs=138.8

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||++||+|. +++.... ...+++..+..++.|++.||.|||+.||+||||||    ++.++.++|+|||++...
T Consensus        75 ~~lv~e~~~g~~L~-~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~  152 (285)
T cd05630          75 LCLVLTLMNGGDLK-FHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHV  152 (285)
T ss_pred             EEEEEEecCCCcHH-HHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeec
Confidence            68999999999998 6654432 12588999999999999999999999999999999    788899999999998765


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHhcCCCCCCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM---RALFLMSKSGFKPPALKD  162 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~  162 (302)
                      .... ......|+..|+|||++.   +..++.++|+||+||++|+|++|+.||......   ..........    ....
T Consensus       153 ~~~~-~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~----~~~~  224 (285)
T cd05630         153 PEGQ-TIKGRVGTVGYMAPEVVK---NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV----QEEY  224 (285)
T ss_pred             CCCc-cccCCCCCccccChHHHc---CCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh----hhhc
Confidence            4332 223447899999999996   566889999999999999999999999765432   1121211111    1112


Q ss_pred             CCCCCHHHHHHHHHhhhcCCCCCCC-----HHHHHH
Q psy3574         163 KDRWSSTFHNFVKIALTKNPKKRPT-----ADKLLQ  193 (302)
Q Consensus       163 ~~~~s~~~~~li~~~L~~dp~~R~t-----~~~ll~  193 (302)
                      +..++..+.+|+.+||+.||++|||     ++++++
T Consensus       225 ~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         225 SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            3567899999999999999999999     899999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=2.9e-33  Score=250.58  Aligned_cols=173  Identities=20%  Similarity=0.237  Sum_probs=134.8

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+.+ +|. ..+.  .   .+++..+..++.||+.||.|||++||+||||||    ++.+|.+||+|||+++..
T Consensus       101 ~~lv~e~~~~-~l~-~~~~--~---~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~  173 (359)
T cd07876         101 VYLVMELMDA-NLC-QVIH--M---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  173 (359)
T ss_pred             eEEEEeCCCc-CHH-HHHh--c---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence            5899999987 565 4443  2   488889999999999999999999999999999    888999999999998765


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC----------
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF----------  155 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~----------  155 (302)
                      ... .......||+.|+|||++.   +..++.++|||||||++|+|++|+.||.+.+.......+.....          
T Consensus       174 ~~~-~~~~~~~~t~~y~aPE~~~---~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (359)
T cd07876         174 CTN-FMMTPYVVTRYYRAPEVIL---GMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL  249 (359)
T ss_pred             ccC-ccCCCCcccCCCCCchhcc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence            432 2233457899999999996   66788999999999999999999999987665443322221100          


Q ss_pred             ------------CCCC---------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         156 ------------KPPA---------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       156 ------------~~~~---------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                  ..+.               .......+..+++||.+||..||++|||+.++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  314 (359)
T cd07876         250 QPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR  314 (359)
T ss_pred             HHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence                        0000               0011124678999999999999999999999999

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2e-33  Score=254.38  Aligned_cols=185  Identities=18%  Similarity=0.216  Sum_probs=143.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    .|+|||++.+ +|. .++....   .+++.+++.++.||+.||.|||++||+||||||    ++..+
T Consensus       148 iv~~~~~~~~~~~~~lv~e~~~~-~l~-~~l~~~~---~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~  222 (392)
T PHA03207        148 IINLIHAYRWKSTVCMVMPKYKC-DLF-TYVDRSG---PLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPE  222 (392)
T ss_pred             ccceeeeEeeCCEEEEEehhcCC-CHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC
Confidence            567776654    5899999975 888 6666555   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH---HHH
Q psy3574          73 DVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM---RAL  147 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~  147 (302)
                      .+||+|||++........  ......||+.|+|||++.   ...|+.++|||||||++|+|++|+.||.+....   ..+
T Consensus       223 ~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l  299 (392)
T PHA03207        223 NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLA---LDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQL  299 (392)
T ss_pred             CEEEccCccccccCcccccccccccccccCccCHhHhc---CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHH
Confidence            999999999976654322  123457999999999995   666899999999999999999999999765321   112


Q ss_pred             HHHHhcCC-----------------------------CCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         148 FLMSKSGF-----------------------------KPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~-----------------------------~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+.....                             ..+.......++.++.+||.+||..||++||++.++|.
T Consensus       300 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~  374 (392)
T PHA03207        300 RSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS  374 (392)
T ss_pred             HHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence            22211000                             00000011245678999999999999999999999999

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-33  Score=239.35  Aligned_cols=189  Identities=62%  Similarity=0.979  Sum_probs=155.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhc-cccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      |+++++.+.    +|++|||+++++|. .++... .   .+++..+..++.|++.||+|||++|++|+||+|    ++.+
T Consensus        62 i~~~~~~~~~~~~~~l~~e~~~~~~l~-~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~  137 (262)
T cd06613          62 IVAYFGSYLRRDKLWIVMEYCGGGSLQ-DIYQVTRG---PLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTED  137 (262)
T ss_pred             hhceEEEEEeCCEEEEEEeCCCCCcHH-HHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCC
Confidence            456666554    58999999999999 777665 5   799999999999999999999999999999999    7889


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +.+||+|||.+..............++..|+|||.+.+.....++.++|+||+||++|+|++|..||.+.........+.
T Consensus       138 ~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~  217 (262)
T cd06613         138 GDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLIS  217 (262)
T ss_pred             CCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            99999999998876554333445578889999999863212267889999999999999999999998877776666665


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....++.......++.++.+++.+||..+|.+|||+.+++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         218 KSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             hccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            554444444444567889999999999999999999999999

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=2.9e-33  Score=248.07  Aligned_cols=183  Identities=23%  Similarity=0.406  Sum_probs=144.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC-CCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS-GFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp----~~~~   71 (302)
                      ||++++.|.    .|+||||+.||+|. +++....   .+++..+..++.|++.||.|||++ +++||||||    ++.+
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~  140 (333)
T cd06650          65 IVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAG---RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR  140 (333)
T ss_pred             ccceeEEEEECCEEEEEEecCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCC
Confidence            567776655    58999999999999 7777766   789999999999999999999985 799999999    7788


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +.+||+|||++......  ......|+..|+|||++.   +..++.++|+|||||++|+|++|+.||...........+.
T Consensus       141 ~~~kL~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~  215 (333)
T cd06650         141 GEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQ---GTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFG  215 (333)
T ss_pred             CCEEEeeCCcchhhhhh--ccccCCCCccccCHHHhc---CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhc
Confidence            99999999998765432  223457899999999985   5668899999999999999999999997654433221110


Q ss_pred             h------------------------------------------cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHH
Q psy3574         152 K------------------------------------------SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD  189 (302)
Q Consensus       152 ~------------------------------------------~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~  189 (302)
                      .                                          .....+.. ....++.++++||.+||+.||++|||+.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~~P~~Rpt~~  294 (333)
T cd06650         216 CPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKL-PSGVFGAEFQDFVNKCLIKNPAERADLK  294 (333)
T ss_pred             CcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccC-CCCCcCHHHHHHHHHhccCCcccCcCHH
Confidence            0                                          00000000 1123578899999999999999999999


Q ss_pred             HHHH
Q psy3574         190 KLLQ  193 (302)
Q Consensus       190 ~ll~  193 (302)
                      +++.
T Consensus       295 ell~  298 (333)
T cd06650         295 QLMV  298 (333)
T ss_pred             HHhh
Confidence            9999

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0576|consensus

Probab=100.00  E-value=6.5e-34  Score=255.91  Aligned_cols=238  Identities=61%  Similarity=0.903  Sum_probs=221.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||-||+...    .||+||||.||+|+ +++..-+   +++|.++.+..+..+.||+|||+.|-+|||||-    +.+.|
T Consensus        74 ivay~gsylr~dklwicMEycgggslQ-diy~~Tg---plselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~g  149 (829)
T KOG0576|consen   74 IVAYFGSYLRRDKLWICMEYCGGGSLQ-DIYHVTG---PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEG  149 (829)
T ss_pred             hHHHHhhhhhhcCcEEEEEecCCCccc-ceeeecc---cchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccC
Confidence            455666444    69999999999999 9999888   999999999999999999999999999999999    88999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||.+..+.....+...++||+.|||||+....+..+|...+|+|++|+...|+..-++|.++..+.+.+....+
T Consensus       150 DvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTk  229 (829)
T KOG0576|consen  150 DVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTK  229 (829)
T ss_pred             ceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhc
Confidence            99999999999998887888899999999999999888889999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVA  232 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~  232 (302)
                      .++.+|.+++...+++.+.+|++.+|.++|++||+++.+|.                          |||.......+..
T Consensus       230 S~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~--------------------------h~fvs~~l~~rl~  283 (829)
T KOG0576|consen  230 SGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ--------------------------HPFVSQTLSRRLA  283 (829)
T ss_pred             cCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee--------------------------ceeeccchhhHHH
Confidence            99999999999999999999999999999999999999999                          9999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCCCCCCCCCCcchhHHHHh
Q psy3574         233 IELLQKVSNPPTTYTDLEPDDDGEIPNVPQRIQSRL  268 (302)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (302)
                      .+++++.++|.......++.+.+.+..++.++.+.-
T Consensus       284 ~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~  319 (829)
T KOG0576|consen  284 IELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTG  319 (829)
T ss_pred             HHHHHHccCCCCcccccccCCcccccchhhhhhcCC
Confidence            999999999998888888888888888888887665

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=4.1e-33  Score=241.01  Aligned_cols=174  Identities=17%  Similarity=0.212  Sum_probs=139.7

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+.||+|. .++...+   .+++..++.++.|++.||+|||+.+++||||+|    ++.++.+||+|||++...
T Consensus        72 ~~~v~e~~~g~~L~-~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~  147 (278)
T cd05606          72 LSFILDLMNGGDLH-YHLSQHG---VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF  147 (278)
T ss_pred             EEEEEecCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCcccc
Confidence            68999999999999 7776666   799999999999999999999999999999999    778899999999998765


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR  165 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  165 (302)
                      ...  ......|+..|+|||++.  .+..++.++|+||+||++|+|++|+.||.+................  ....+..
T Consensus       148 ~~~--~~~~~~~~~~y~aPE~~~--~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~  221 (278)
T cd05606         148 SKK--KPHASVGTHGYMAPEVLQ--KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM--AVELPDS  221 (278)
T ss_pred             Ccc--CCcCcCCCcCCcCcHHhc--CCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhcc--CCCCCCc
Confidence            432  223457899999999985  2335789999999999999999999999765322111111111101  1122345


Q ss_pred             CCHHHHHHHHHhhhcCCCCCC-----CHHHHHH
Q psy3574         166 WSSTFHNFVKIALTKNPKKRP-----TADKLLQ  193 (302)
Q Consensus       166 ~s~~~~~li~~~L~~dp~~R~-----t~~~ll~  193 (302)
                      ++..+.+++.+||..+|.+|+     ++.++++
T Consensus       222 ~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         222 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             CCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            689999999999999999999     9999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=3e-33  Score=251.68  Aligned_cols=178  Identities=21%  Similarity=0.255  Sum_probs=141.4

Q ss_pred             hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      ..|+||||+.+ +|. .++....   .+++..++.++.||+.||.|||++||+||||||    ++.++.+||+|||++..
T Consensus        78 ~~~lv~e~~~~-~l~-~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~  152 (372)
T cd07853          78 EIYVVTELMQS-DLH-KIIVSPQ---PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARV  152 (372)
T ss_pred             eEEEEeecccc-CHH-HHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceee
Confidence            35899999975 787 6666555   799999999999999999999999999999999    88899999999999876


Q ss_pred             cccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC---------
Q psy3574          85 ITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG---------  154 (302)
Q Consensus        85 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~---------  154 (302)
                      ...... ......+++.|+|||++.+  ...++.++||||+||++|+|++|+.||.+.+.......+....         
T Consensus       153 ~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~  230 (372)
T cd07853         153 EEPDESKHMTQEVVTQYYRAPEILMG--SRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMR  230 (372)
T ss_pred             cccCccccCCCCCcCCCcCCHHHHcC--CCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence            543221 2233467899999999862  3447899999999999999999999998877666555443311         


Q ss_pred             --------------CCCCCC----CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         155 --------------FKPPAL----KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       155 --------------~~~~~~----~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                    ..++..    ......+.++.+||.+||+.||.+|||+.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence                          111110    112345889999999999999999999999999

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=3.6e-33  Score=249.63  Aligned_cols=173  Identities=20%  Similarity=0.250  Sum_probs=135.9

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+++ +|. ..+..     .+++..++.++.|++.||+|||++||+||||||    ++.++.+||+|||+++..
T Consensus        97 ~~lv~e~~~~-~l~-~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~  169 (355)
T cd07874          97 VYLVMELMDA-NLC-QVIQM-----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  169 (355)
T ss_pred             eEEEhhhhcc-cHH-HHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccC
Confidence            4899999987 566 44432     478889999999999999999999999999999    888999999999999765


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC--------
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKP--------  157 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~--------  157 (302)
                      ... .......||+.|+|||++.   +..++.++|+|||||++|+|++|+.||.+.+.......+......+        
T Consensus       170 ~~~-~~~~~~~~t~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (355)
T cd07874         170 GTS-FMMTPYVVTRYYRAPEVIL---GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL  245 (355)
T ss_pred             CCc-cccCCccccCCccCHHHHc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence            443 2234557899999999985   6678999999999999999999999998776554433322210000        


Q ss_pred             -------------------C----------CCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         158 -------------------P----------ALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       158 -------------------~----------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                         +          ........+..+++||.+||..||++|||+.++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~  310 (355)
T cd07874         246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ  310 (355)
T ss_pred             cHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence                               0          00011224567899999999999999999999999

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=6.2e-33  Score=241.44  Aligned_cols=202  Identities=40%  Similarity=0.659  Sum_probs=158.3

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      +++++.+.    .|+||||++|++|. .++.. ..   .+++..+..++.|++.||.|||++|++||||+|    ++.++
T Consensus        72 ~~~~~~~~~~~~~~lv~e~~~~~~l~-~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~  147 (292)
T cd06644          72 VKLLGAFYWDGKLWIMIEFCPGGAVD-AIMLELDR---GLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDG  147 (292)
T ss_pred             eeeEEEEEeCCeEEEEEecCCCCcHH-HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCC
Confidence            44555443    58999999999998 55543 34   689999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhccccc--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||++..............++..|+|||++...  ....++.++|+|||||++|+|++|..||...+.......+
T Consensus       148 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~  227 (292)
T cd06644         148 DIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI  227 (292)
T ss_pred             CEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHH
Confidence            99999999987654432333445688899999998522  1344678999999999999999999999877665554444


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKR  230 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~  230 (302)
                      ...  ..+....+..++.++.++|.+||..+|++||++.++++                          ||||....+..
T Consensus       228 ~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~--------------------------~~~~~~~~~~~  279 (292)
T cd06644         228 AKS--EPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE--------------------------HPFVSSVTSNR  279 (292)
T ss_pred             hcC--CCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc--------------------------Cccccccccch
Confidence            332  22233334567899999999999999999999999999                          99998766655


Q ss_pred             HHHHH
Q psy3574         231 VAIEL  235 (302)
Q Consensus       231 ~~~~~  235 (302)
                      .....
T Consensus       280 ~~~~~  284 (292)
T cd06644         280 PLREL  284 (292)
T ss_pred             hHHHH
Confidence            44433

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=6.2e-33  Score=241.27  Aligned_cols=191  Identities=21%  Similarity=0.321  Sum_probs=159.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++++|. +++....   .+++..+..++.|++.||+|||++|++|+||+|    ++.++
T Consensus        63 i~~~~~~~~~~~~~~~v~e~~~~~~L~-~~~~~~~---~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~  138 (290)
T cd05580          63 LVNLYGSFQDDSNLYLVMEYVPGGELF-SHLRKSG---RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG  138 (290)
T ss_pred             ccceeeEEEcCCeEEEEEecCCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC
Confidence            455666544    58999999999999 7777766   799999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++......   .....+++.|+|||.+.   ...++.++|+||||+++|+|++|..||...........+..
T Consensus       139 ~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  212 (290)
T cd05580         139 YIKITDFGFAKRVKGR---TYTLCGTPEYLAPEIIL---SKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE  212 (290)
T ss_pred             CEEEeeCCCccccCCC---CCCCCCCccccChhhhc---CCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence            9999999998876543   33456899999999985   45678899999999999999999999988776655555554


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      ....     .+..++..++++|.+||..||.+|+     +++++++                          ||||....
T Consensus       213 ~~~~-----~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~--------------------------~~~~~~~~  261 (290)
T cd05580         213 GKVR-----FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN--------------------------HPWFAGID  261 (290)
T ss_pred             CCcc-----CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc--------------------------CcccccCC
Confidence            3322     2345689999999999999999999     8999999                          99998877


Q ss_pred             hhHHH
Q psy3574         228 SKRVA  232 (302)
Q Consensus       228 ~~~~~  232 (302)
                      |....
T Consensus       262 ~~~~~  266 (290)
T cd05580         262 WIALL  266 (290)
T ss_pred             HHHHh
Confidence            66554

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=3.6e-33  Score=245.72  Aligned_cols=189  Identities=20%  Similarity=0.212  Sum_probs=137.3

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhcc------ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGI------TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-   67 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~------~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-   67 (302)
                      ||++++.|.      .|+||||+.+ +|. .++....      ....+++..++.++.||+.||.|||++||+|||||| 
T Consensus        60 iv~~~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~  137 (317)
T cd07868          60 VISLQKVFLSHADRKVWLLFDYAEH-DLW-HIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPA  137 (317)
T ss_pred             CcceeeeEecCCCcEEEEEEeccCC-CHH-HHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHH
Confidence            466666553      5899999976 787 6654321      112588899999999999999999999999999999 


Q ss_pred             ---C----CCCCCEEEeccccccccccccc---cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCC
Q psy3574          68 ---K----DRCGDVKLADFGVSAQITATIN---KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPP  137 (302)
Q Consensus        68 ---~----~~~~~ikL~DFg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p  137 (302)
                         +    +..+.+||+|||+++.......   ......||+.|+|||++.  ....++.++|+||+||++|+|++|++|
T Consensus       138 Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwslG~il~el~~g~~~  215 (317)
T cd07868         138 NILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL--GARHYTKAIDIWAIGCIFAELLTSEPI  215 (317)
T ss_pred             HEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHc--CCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence               3    4668999999999987654321   223457899999999986  234578999999999999999999999


Q ss_pred             CCCCCh---------HHHHHHHHhcCCCCCC-----------------------C----------CCCCCCCHHHHHHHH
Q psy3574         138 MFDLHP---------MRALFLMSKSGFKPPA-----------------------L----------KDKDRWSSTFHNFVK  175 (302)
Q Consensus       138 f~~~~~---------~~~~~~i~~~~~~~~~-----------------------~----------~~~~~~s~~~~~li~  175 (302)
                      |.....         ......+......+..                       .          ......+..+.+||.
T Consensus       216 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  295 (317)
T cd07868         216 FHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQ  295 (317)
T ss_pred             ccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHH
Confidence            964332         1111111111000000                       0          001123567899999


Q ss_pred             HhhhcCCCCCCCHHHHHH
Q psy3574         176 IALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       176 ~~L~~dp~~R~t~~~ll~  193 (302)
                      +||+.||.+|||++++|+
T Consensus       296 ~mL~~dP~~R~t~~e~l~  313 (317)
T cd07868         296 KLLTMDPIKRITSEQAMQ  313 (317)
T ss_pred             HHhccCcccCCCHHHHhc
Confidence            999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0584|consensus

Probab=100.00  E-value=8.9e-34  Score=254.12  Aligned_cols=180  Identities=22%  Similarity=0.350  Sum_probs=157.2

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCC--CCCCCCcC-----
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG--FKPPALKD-----   67 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--i~Hrdlkp-----   67 (302)
                      |||||+.|.      ..+|+|++.+|+|. .++++.+   .++...++.|++||++||.|||++.  |+|||||-     
T Consensus       103 Iirfy~SW~d~~n~~in~iTEL~TSGtLr-~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFi  178 (632)
T KOG0584|consen  103 IIRFYDSWVDTDNKTINFITELFTSGTLR-EYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFV  178 (632)
T ss_pred             eeeeeeheecCCCceeeeeeecccCCcHH-HHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEE
Confidence            789999998      36999999999999 8888877   7999999999999999999999994  99999999     


Q ss_pred             CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy3574          68 KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRAL  147 (302)
Q Consensus        68 ~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  147 (302)
                      ....|.|||+|+|+|.......  ....+|||.|||||+.    ...|+..+||||||+++.||+|+..||..-.+...+
T Consensus       179 nG~~G~VKIGDLGLAtl~r~s~--aksvIGTPEFMAPEmY----EE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQI  252 (632)
T KOG0584|consen  179 NGNLGEVKIGDLGLATLLRKSH--AKSVIGTPEFMAPEMY----EENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQI  252 (632)
T ss_pred             cCCcCceeecchhHHHHhhccc--cceeccCccccChHHH----hhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHH
Confidence            5567899999999998877642  3347899999999998    677999999999999999999999999876666677


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         148 FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ++.+..+..|..+....  .+++++||.+||.. ..+|+|+.|||+
T Consensus       253 YKKV~SGiKP~sl~kV~--dPevr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  253 YKKVTSGIKPAALSKVK--DPEVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             HHHHHcCCCHHHhhccC--CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence            77777776665543222  78999999999999 899999999999

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=4.9e-33  Score=247.10  Aligned_cols=155  Identities=19%  Similarity=0.300  Sum_probs=122.3

Q ss_pred             cccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhccc
Q psy3574          35 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAA  108 (302)
Q Consensus        35 ~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~  108 (302)
                      ++++..+..++.||+.||+|||++||+||||||    ++.++.+||+|||+++.......  ......++..|+|||++.
T Consensus       170 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  249 (338)
T cd05102         170 PLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIF  249 (338)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhh
Confidence            366777888999999999999999999999999    77889999999999976543211  112234567899999985


Q ss_pred             ccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC
Q psy3574         109 VERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT  187 (302)
Q Consensus       109 ~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t  187 (302)
                         ...++.++|||||||++|+|++ |..||.+.............+...   ..+..++..+.+++.+||..||.+|||
T Consensus       250 ---~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~RPs  323 (338)
T cd05102         250 ---DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRM---RAPENATPEIYRIMLACWQGDPKERPT  323 (338)
T ss_pred             ---cCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHccCChhhCcC
Confidence               5668999999999999999997 999998765443333333322211   224567899999999999999999999


Q ss_pred             HHHHHHHH
Q psy3574         188 ADKLLQVI  195 (302)
Q Consensus       188 ~~~ll~~l  195 (302)
                      +.++++.+
T Consensus       324 ~~el~~~l  331 (338)
T cd05102         324 FSALVEIL  331 (338)
T ss_pred             HHHHHHHH
Confidence            99998844

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=6.8e-33  Score=241.83  Aligned_cols=183  Identities=34%  Similarity=0.603  Sum_probs=151.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+|+||+.+++|. .++...    .+++.++..++.|++.||+|||++|++||||+|    ++.++
T Consensus        78 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~  152 (296)
T cd06655          78 IVNFLDSFLVGDELFVVMEYLAGGSLT-DVVTET----CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDG  152 (296)
T ss_pred             eeeeeeeEecCceEEEEEEecCCCcHH-HHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            345555544    58999999999999 666543    489999999999999999999999999999999    78899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............++..|+|||.+.   ...++.++|+|||||++|+|++|+.||...+.......+..
T Consensus       153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~  229 (296)
T cd06655         153 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT---RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT  229 (296)
T ss_pred             CEEEccCccchhcccccccCCCcCCCccccCcchhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            999999999876654333333456889999999985   56678999999999999999999999988877666555544


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..  .+....+..++..+.++|.+||..+|.+||++.++++
T Consensus       230 ~~--~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         230 NG--TPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             cC--CcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            32  2233345668899999999999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=7.6e-33  Score=236.12  Aligned_cols=183  Identities=21%  Similarity=0.317  Sum_probs=149.2

Q ss_pred             chhhhcch-----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           2 SRVFNHFL-----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         2 v~~~~~~~-----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      +++++.+.     +|+||||+++++|. +++.... ...+++.++..++.|++.||++||++|++||||+|    ++.++
T Consensus        62 ~~~~~~~~~~~~~~~lv~e~~~~~~l~-~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~  139 (257)
T cd08223          62 VAYRESWEGEDGLLYIVMGFCEGGDLY-HKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTN  139 (257)
T ss_pred             eeeeeeecCCCCEEEEEecccCCCcHH-HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCC
Confidence            45555443     58999999999999 6665432 12689999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .++|+|||++..............+++.|+|||++.   ...++.++|+||+||++|+|++|+.||...+.......+..
T Consensus       140 ~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~  216 (257)
T cd08223         140 IIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFS---NKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIE  216 (257)
T ss_pred             cEEEecccceEEecccCCccccccCCcCccChhHhc---CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Confidence            999999999987654433344557899999999985   56678899999999999999999999987776655555444


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....    .+..++..+.+++.+||+.+|.+||++.++++
T Consensus       217 ~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         217 GKLPP----MPKDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             cCCCC----CccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            32211    23567899999999999999999999999999

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.6e-33  Score=239.44  Aligned_cols=181  Identities=39%  Similarity=0.681  Sum_probs=145.5

Q ss_pred             heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      +|+||||+++++|. +++.. ...+..+++..++.++.|++.||.|||++|++|+||+|    ++.++.+||+|||++..
T Consensus        84 ~~lv~e~~~~~~L~-~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~  162 (275)
T cd06608          84 LWLVMELCGGGSVT-DLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQ  162 (275)
T ss_pred             EEEEEEcCCCCcHH-HHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCcccee
Confidence            58999999999999 66654 21122689999999999999999999999999999999    77889999999999876


Q ss_pred             cccccccccccccCcccchhhccccc--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCC
Q psy3574          85 ITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD  162 (302)
Q Consensus        85 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  162 (302)
                      ............|+..|+|||++...  ....++.++|+|||||++|+|++|+.||...........+....  .+....
T Consensus       163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~  240 (275)
T cd06608         163 LDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNP--PPTLKS  240 (275)
T ss_pred             cccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccC--CCCCCc
Confidence            65443344456789999999998532  13446789999999999999999999998766655555544432  222333


Q ss_pred             CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         163 KDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       163 ~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...++..+.+||.+||..||++|||+.++++
T Consensus       241 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         241 PENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             hhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            3457889999999999999999999999999

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=4.4e-33  Score=242.52  Aligned_cols=182  Identities=35%  Similarity=0.606  Sum_probs=148.3

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.+.    .|+||||+++++|. .++...    .+++.++..++.||+.||+|||++||+||||+|    ++.++.
T Consensus        82 i~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~  156 (292)
T cd06658          82 VDMYNSYLVGDELWVVMEFLEGGALT-DIVTHT----RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR  156 (292)
T ss_pred             HHHHHheecCCeEEEEEeCCCCCcHH-HHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC
Confidence            45555444    58999999999998 666543    488999999999999999999999999999999    788899


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      +||+|||++..............|+..|+|||.+.   ...++.++|+||+|+++|+|++|+.||...........+...
T Consensus       157 ~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~  233 (292)
T cd06658         157 IKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVIS---RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDN  233 (292)
T ss_pred             EEEccCcchhhcccccccCceeecCccccCHHHHc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence            99999999876544333334457899999999985   556889999999999999999999999887766655544332


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       154 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .  .+.......++..+.+++.+||..+|.+|||++++++
T Consensus       234 ~--~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  271 (292)
T cd06658         234 L--PPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQ  271 (292)
T ss_pred             C--CCccccccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            1  2222233457889999999999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0603|consensus

Probab=100.00  E-value=1.6e-33  Score=253.38  Aligned_cols=166  Identities=17%  Similarity=0.209  Sum_probs=139.3

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C-CCCCCEEEeccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K-DRCGDVKLADFGVSAQ   84 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~-~~~~~ikL~DFg~a~~   84 (302)
                      .|+|||++.||.+.+.++....    +. .++..|+++|+.|+.|||++||+|||+||    + ++.|+++|||||.++.
T Consensus       391 ~~~v~e~l~g~ell~ri~~~~~----~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~  465 (612)
T KOG0603|consen  391 IYLVMELLDGGELLRRIRSKPE----FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSE  465 (612)
T ss_pred             eeeeehhccccHHHHHHHhcch----hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhh
Confidence            5999999999998855554433    44 78888999999999999999999999999    5 5889999999999988


Q ss_pred             cccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcCCCCCCCCCC
Q psy3574          85 ITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM-RALFLMSKSGFKPPALKDK  163 (302)
Q Consensus        85 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~  163 (302)
                      ....   ..+.+-|..|.|||++.   ..+|+.++||||||++||+|++|+.||...... +....+....     .  .
T Consensus       466 ~~~~---~~tp~~t~~y~APEvl~---~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~-----~--s  532 (612)
T KOG0603|consen  466 LERS---CDTPALTLQYVAPEVLA---IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPK-----F--S  532 (612)
T ss_pred             Cchh---hcccchhhcccChhhhc---cCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCc-----c--c
Confidence            7764   33446788999999996   778999999999999999999999999876655 3333332221     1  2


Q ss_pred             CCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         164 DRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       164 ~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+|.++++||.+||+.||.+|+++.+++.
T Consensus       533 ~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  533 ECVSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence            678999999999999999999999999999

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.8e-33  Score=237.02  Aligned_cols=181  Identities=21%  Similarity=0.283  Sum_probs=149.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+|+||++|++|. .++....   .+++..+..++.|++.||.|||+.|++||||+|    ++.++
T Consensus        59 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~  134 (260)
T cd05611          59 VAKLYYSFQSKDYLYLVMEYLNGGDCA-SLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTG  134 (260)
T ss_pred             eeeeeeeEEcCCeEEEEEeccCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence            456666554    58999999999999 8887766   799999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++.....    .....++..|+|||.+.   +..++.++|+||+|+++|+|++|..||...+.......+..
T Consensus       135 ~~~l~dfg~~~~~~~----~~~~~~~~~y~~pe~~~---~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  207 (260)
T cd05611         135 HLKLTDFGLSRNGLE----NKKFVGTPDYLAPETIL---GVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILS  207 (260)
T ss_pred             cEEEeecccceeccc----cccCCCCcCccChhhhc---CCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            999999999875443    22446888999999986   44578999999999999999999999988777766655554


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC---HHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT---ADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t---~~~ll~  193 (302)
                      .....+. .....++..+.++|.+||+.+|++||+   +++++.
T Consensus       208 ~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~  250 (260)
T cd05611         208 RRINWPE-EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS  250 (260)
T ss_pred             cccCCCC-cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence            4332221 122357899999999999999999995   478888

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.7e-33  Score=248.36  Aligned_cols=173  Identities=20%  Similarity=0.251  Sum_probs=138.1

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+++|++ +++|. .++...    .+++..++.++.||+.||.|||++||+||||||    ++.++.+||+|||+++..
T Consensus        95 ~~~~~~~~-~~~l~-~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~  168 (343)
T cd07878          95 VYLVTNLM-GADLN-NIVKCQ----KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA  168 (343)
T ss_pred             EEEEeecC-CCCHH-HHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceec
Confidence            48999988 66898 776543    599999999999999999999999999999999    888999999999999865


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC-------
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP-------  158 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-------  158 (302)
                      ...   ....+|++.|+|||++.  ....++.++|||||||++|+|++|+.||.+.+....+..+......++       
T Consensus       169 ~~~---~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (343)
T cd07878         169 DDE---MTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKI  243 (343)
T ss_pred             CCC---cCCccccccccCchHhc--CCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence            432   33457899999999986  234588999999999999999999999987765555444332111100       


Q ss_pred             -------------CC------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         159 -------------AL------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       159 -------------~~------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                   ..      ......++.+.+||.+||..||.+|||+.++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~  297 (343)
T cd07878         244 SSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA  297 (343)
T ss_pred             chhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                         00      001235677899999999999999999999999

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=7.2e-33  Score=242.11  Aligned_cols=187  Identities=17%  Similarity=0.223  Sum_probs=145.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+.+ +|. .++....  ..+++..++.++.||+.||.|||++||+|+||+|    ++.++
T Consensus        66 I~~~~~~~~~~~~~~lv~e~~~~-~l~-~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~  141 (301)
T cd07873          66 IVTLHDIIHTEKSLTLVFEYLDK-DLK-QYLDDCG--NSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG  141 (301)
T ss_pred             cceEEEEEecCCeEEEEEecccc-CHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCC
Confidence            566777665    5899999985 888 5554432  2688999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............++..|+|||++.  ....++.++|||||||++|+|++|++||...+..+....+..
T Consensus       142 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~--~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~  219 (301)
T cd07873         142 ELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILL--GSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFR  219 (301)
T ss_pred             cEEECcCcchhccCCCCCcccccceeecccCcHHHh--CCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            999999999876544323333446788999999985  234578899999999999999999999987776555443332


Q ss_pred             cCCCC-------------------CCC------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKP-------------------PAL------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~-------------------~~~------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+                   +..      .....+++.+.+||.+||+.||.+|||+.++++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         220 ILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             HcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            11100                   000      011346889999999999999999999999999

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=7e-33  Score=241.71  Aligned_cols=182  Identities=34%  Similarity=0.586  Sum_probs=148.3

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.|.    .|+||||++|++|. .++...    .+++.++..++.|++.||+|||+.||+||||+|    ++.++.
T Consensus        80 ~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~  154 (296)
T cd06654          80 VNYLDSYLVGDELWVVMEYLAGGSLT-DVVTET----CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS  154 (296)
T ss_pred             eeEEEEEEeCCEEEEeecccCCCCHH-HHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCC
Confidence            45555443    69999999999999 777543    488899999999999999999999999999999    888899


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      +||+|||++..............+++.|+|||.+.   ...++.++|+||+||++|+|++|+.||...........+...
T Consensus       155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~  231 (296)
T cd06654         155 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT---RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN  231 (296)
T ss_pred             EEECccccchhccccccccCcccCCccccCHHHHc---CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC
Confidence            99999999876544323333457889999999985   556789999999999999999999999877765554444332


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       154 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .  .+....+..++..+.++|.+||..+|++||++.++++
T Consensus       232 ~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         232 G--TPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             C--CCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence            2  2222334567899999999999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=7.7e-33  Score=239.72  Aligned_cols=189  Identities=19%  Similarity=0.219  Sum_probs=144.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++ +|. .++.....+..+++..++.++.||+.||+|||++|++||||+|    ++.+|
T Consensus        61 i~~~~~~~~~~~~~~~v~e~~~~-~l~-~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~  138 (285)
T cd07861          61 IVCLQDVLMQESRLYLIFEFLSM-DLK-KYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKG  138 (285)
T ss_pred             EeeeEEEEeeCCeEEEEEecCCC-CHH-HHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCC
Confidence            356666554    5999999985 887 5665433223689999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............+++.|+|||++.  ....++.++|+|||||++|+|++|++||.+.........+..
T Consensus       139 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~  216 (285)
T cd07861         139 VIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLL--GSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFR  216 (285)
T ss_pred             cEEECcccceeecCCCcccccCCcccccccChHHhc--CCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            999999999876544322233346788999999985  234478899999999999999999999987665444333221


Q ss_pred             cCCCC------------------C------CCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKP------------------P------ALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~------------------~------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+                  +      .......++.++.++|.+||..||.+|||+.++++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         217 ILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             HhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            11000                  0      00012347889999999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=7.1e-33  Score=239.92  Aligned_cols=186  Identities=19%  Similarity=0.253  Sum_probs=140.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHH-hccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWA-VGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~-~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      |+++++.+.    .|+|+||+.+ +|. .++. ..+   .+++..++.++.||+.||.|||++|++||||+|    ++.+
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~  135 (284)
T cd07839          61 IVRLYDVLHSDKKLTLVFEYCDQ-DLK-KYFDSCNG---DIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKN  135 (284)
T ss_pred             eeeHHHHhccCCceEEEEecCCC-CHH-HHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCC
Confidence            355555554    5899999986 777 4444 344   699999999999999999999999999999999    7888


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL-HPMRALFLM  150 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-~~~~~~~~i  150 (302)
                      +.+||+|||++..............++..|+|||++.  ....++.++|+||+||++|+|++|..|+... +.......+
T Consensus       136 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~  213 (284)
T cd07839         136 GELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLF--GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI  213 (284)
T ss_pred             CcEEECccchhhccCCCCCCcCCCccccCCcChHHHh--CCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHH
Confidence            9999999999886654333334456788999999985  2344788999999999999999998886543 333333222


Q ss_pred             HhcCCC-----------------CCCC-------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFK-----------------PPAL-------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~-----------------~~~~-------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ......                 .+..       .....++.++.+||.+||..||.+|||++++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         214 FRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             HHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            211000                 0000       011346889999999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.3e-33  Score=248.20  Aligned_cols=184  Identities=18%  Similarity=0.258  Sum_probs=137.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.+.    .|+||||+.+ +|. .++.. ..   .+++..++.++.||+.||.|||++||+||||||    ++..
T Consensus       119 iv~~~~~~~~~~~~~lv~e~~~~-~l~-~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~  193 (357)
T PHA03209        119 VIRMKDTLVSGAITCMVLPHYSS-DLY-TYLTKRSR---PLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDV  193 (357)
T ss_pred             CcChhheEEeCCeeEEEEEccCC-cHH-HHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence            578888766    5899999965 887 45543 34   799999999999999999999999999999999    8888


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-------
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM-------  144 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------  144 (302)
                      +.+||+|||+++..... .......||..|+|||++.   +..++.++|||||||++|+|+++..++....+.       
T Consensus       194 ~~~kl~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~  269 (357)
T PHA03209        194 DQVCIGDLGAAQFPVVA-PAFLGLAGTVETNAPEVLA---RDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVK  269 (357)
T ss_pred             CCEEEecCccccccccC-cccccccccccccCCeecC---CCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHH
Confidence            99999999998754332 2233457899999999996   566899999999999999999866555332111       


Q ss_pred             ---HHHHHHHh-cCCCCCCCC----------------------------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHH
Q psy3574         145 ---RALFLMSK-SGFKPPALK----------------------------DKDRWSSTFHNFVKIALTKNPKKRPTADKLL  192 (302)
Q Consensus       145 ---~~~~~i~~-~~~~~~~~~----------------------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll  192 (302)
                         ..+..+.. .+..+....                            ....++..+.+||.+||+.||.+|||+.++|
T Consensus       270 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l  349 (357)
T PHA03209        270 SCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEIL  349 (357)
T ss_pred             HHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHh
Confidence               11111111 111111000                            0124567788899999999999999999999


Q ss_pred             H
Q psy3574         193 Q  193 (302)
Q Consensus       193 ~  193 (302)
                      +
T Consensus       350 ~  350 (357)
T PHA03209        350 N  350 (357)
T ss_pred             c
Confidence            9

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=1.2e-32  Score=239.55  Aligned_cols=181  Identities=35%  Similarity=0.627  Sum_probs=144.1

Q ss_pred             heeEEEecCCcchHHHHHHhc-cccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      .|+||||++||+|. ++++.. ..+..+++..++.++.|++.||+|||++|++||||+|    ++.++.+||+|||++..
T Consensus        99 ~~lv~ey~~~~sL~-~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~  177 (291)
T cd06639          99 LWLVLELCNGGSVT-ELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQ  177 (291)
T ss_pred             eEEEEEECCCCcHH-HHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchh
Confidence            68999999999999 666431 1123689999999999999999999999999999999    77889999999999877


Q ss_pred             cccccccccccccCcccchhhcccccc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCC
Q psy3574          85 ITATINKRKSFIGTPYWMAPEVAAVER--KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD  162 (302)
Q Consensus        85 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  162 (302)
                      ............|+..|+|||++....  ...++.++|+||+||++|+|++|++||...........+....  .+....
T Consensus       178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~  255 (291)
T cd06639         178 LTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNP--PPTLLH  255 (291)
T ss_pred             cccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCC--CCCCCc
Confidence            654322333456889999999975211  1236789999999999999999999998877665555544332  222333


Q ss_pred             CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         163 KDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       163 ~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +..++..+.++|.+||+.+|++||++.++++
T Consensus       256 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         256 PEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            4557788999999999999999999999999

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=2e-32  Score=233.30  Aligned_cols=184  Identities=22%  Similarity=0.380  Sum_probs=152.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||++|++|. +++.... ...+++..+..++.|++.||.|||++|++|+||+|    ++.++
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~  138 (256)
T cd08529          61 IIRYYESFLDKGKLNIVMEYAENGDLH-KLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYD  138 (256)
T ss_pred             eehheeeeccCCEEEEEEEeCCCCcHH-HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCC
Confidence            456676655    59999999999999 7776541 23688999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+++.............|+..|+|||++.   ...++.++|+|||||++|+|++|+.||...+.......+..
T Consensus       139 ~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  215 (256)
T cd08529         139 NVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCE---DKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIR  215 (256)
T ss_pred             CEEEcccccceeccCccchhhccccCccccCHHHhc---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            999999999887655433344557889999999985   56688999999999999999999999988876666555554


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....    ....++..+.+++.+||+.+|++||++.++++
T Consensus       216 ~~~~~----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         216 GVFPP----VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             CCCCC----CccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence            33222    12367899999999999999999999999999

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0587|consensus

Probab=100.00  E-value=2.3e-33  Score=259.23  Aligned_cols=189  Identities=38%  Similarity=0.682  Sum_probs=171.3

Q ss_pred             Cchhhhcch---------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----
Q psy3574           1 MSRVFNHFL---------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----   67 (302)
Q Consensus         1 iv~~~~~~~---------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----   67 (302)
                      +++||+.|+         +|+|||||.||+.- ++.+.-. +..+.|..+..|++.++.||.+||.+.++|||||-    
T Consensus        78 v~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVT-DLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiL  155 (953)
T KOG0587|consen   78 VATFYGAFIKKDPGNGDQLWLVMEFCGGGSVT-DLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVL  155 (953)
T ss_pred             cceEEEEEEEecCCCCCeEEEEeeccCCccHH-HHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEE
Confidence            467888776         59999999999999 8887654 45899999999999999999999999999999999    


Q ss_pred             CCCCCCEEEeccccccccccccccccccccCcccchhhcccccc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          68 KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVER--KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        68 ~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                      +..+|.|||+|||.+..+........+.+||+.|||||++.+..  ...|+..+|+||||++..||..|.+|+.++.+..
T Consensus       156 LT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr  235 (953)
T KOG0587|consen  156 LTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR  235 (953)
T ss_pred             EeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh
Confidence            89999999999999999988878888999999999999998643  3457789999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+..|...  ++|.+..+..++.++.+||..||.+|..+||+..++|+
T Consensus       236 aLF~IpRN--PPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  236 ALFLIPRN--PPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             hhccCCCC--CCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence            88777765  67778888999999999999999999999999999999

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-32  Score=236.20  Aligned_cols=190  Identities=43%  Similarity=0.737  Sum_probs=156.1

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+|+||+++++|. .++...    ++++..++.++.|++.||.|||+++++|+||+|    ++.++.++|+|||++...
T Consensus        74 ~~~v~e~~~~~~L~-~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~  148 (274)
T cd06609          74 LWIIMEYCGGGSCL-DLLKPG----KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQL  148 (274)
T ss_pred             EEEEEEeeCCCcHH-HHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceee
Confidence            58999999999999 777654    589999999999999999999999999999999    888999999999999877


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR  165 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  165 (302)
                      ...........++..|+|||.+.   +..++.++|+||+||++|+|++|..||...+.......+....  .+.... ..
T Consensus       149 ~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~-~~  222 (274)
T cd06609         149 TSTMSKRNTFVGTPFWMAPEVIK---QSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN--PPSLEG-NK  222 (274)
T ss_pred             cccccccccccCCccccChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC--CCCCcc-cc
Confidence            65433344557888999999996   5558999999999999999999999998776655554444432  222111 22


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHHHHHh
Q psy3574         166 WSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELL  236 (302)
Q Consensus       166 ~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~  236 (302)
                      ++..+.+++.+||..+|++||+++++++                          ||||...........+.
T Consensus       223 ~~~~~~~~l~~~l~~~p~~Rpt~~~il~--------------------------~~~~~~~~~~~~~~~~~  267 (274)
T cd06609         223 FSKPFKDFVSLCLNKDPKERPSAKELLK--------------------------HKFIKKAKKTSYLTLLI  267 (274)
T ss_pred             cCHHHHHHHHHHhhCChhhCcCHHHHhh--------------------------ChhhcCCCcccHHHHHH
Confidence            7889999999999999999999999999                          99998766654444443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG0607|consensus

Probab=100.00  E-value=4.6e-33  Score=231.51  Aligned_cols=187  Identities=21%  Similarity=0.326  Sum_probs=149.1

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-------CCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-------KDR   70 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-------~~~   70 (302)
                      +.+.++|.    +|+|||-+.||.|.++|.++.    .|+|.++..++++|+.||.|||.+||.|||+||       -+.
T Consensus       139 lqLiefFEdd~~FYLVfEKm~GGplLshI~~~~----~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~  214 (463)
T KOG0607|consen  139 LQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRK----HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNK  214 (463)
T ss_pred             HHHHHHhcccceEEEEEecccCchHHHHHHHhh----hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCC
Confidence            33444444    599999999999995555554    599999999999999999999999999999999       334


Q ss_pred             CCCEEEecccccccccccc-------ccccccccCcccchhhcccc--cccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q psy3574          71 CGDVKLADFGVSAQITATI-------NKRKSFIGTPYWMAPEVAAV--ERKGGYNQQCDIWAVGITAIELAELQPPMFDL  141 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~--~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  141 (302)
                      -.-||||||.++..+....       ....+.+|+..|||||+...  .....|+.+.|.||||||+|-|++|.+||.+.
T Consensus       215 vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~  294 (463)
T KOG0607|consen  215 VSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGH  294 (463)
T ss_pred             cCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCc
Confidence            4568999998876543221       12345688999999999742  22456899999999999999999999999754


Q ss_pred             C---------------hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         142 H---------------PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       142 ~---------------~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      -               ....+..|..+.+.+|. +.+..+|.+++|+|..+|..|+..|.++.++++
T Consensus       295 Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPd-kdWahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  295 CGADCGWDRGEVCRVCQNKLFESIQEGKYEFPD-KDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             cCCcCCccCCCccHHHHHHHHHHHhccCCcCCh-hhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence            2               33445556666666654 456789999999999999999999999999999

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=1.6e-32  Score=239.65  Aligned_cols=183  Identities=35%  Similarity=0.593  Sum_probs=151.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+|+||+++++|. .++...    .+++..+..++.|++.||+|||++|++||||+|    ++.++
T Consensus        80 i~~~~~~~~~~~~~~iv~e~~~~~~L~-~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~  154 (297)
T cd06659          80 VVEMYKSYLVGEELWVLMEFLQGGALT-DIVSQT----RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDG  154 (297)
T ss_pred             hhhhhhheeeCCeEEEEEecCCCCCHH-HHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCC
Confidence            456676654    58999999999998 666543    589999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............|+..|+|||++.   +..++.++|+||+||++|+|++|+.||...........+..
T Consensus       155 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~  231 (297)
T cd06659         155 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVIS---RTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD  231 (297)
T ss_pred             cEEEeechhHhhcccccccccceecCccccCHHHHc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence            999999999876554333334567899999999985   55688999999999999999999999987776665554433


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .  ..+.......++..+.++|.+||+.+|++||++.++++
T Consensus       232 ~--~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~  270 (297)
T cd06659         232 S--PPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLD  270 (297)
T ss_pred             c--CCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            2  22233334567889999999999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.4e-32  Score=238.53  Aligned_cols=189  Identities=21%  Similarity=0.261  Sum_probs=150.8

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+.+|+|. ..+.... ...+++..+..++.|++.||.|||++||+||||+|    ++.++.+||+|||++...
T Consensus        75 ~~lv~e~~~~~~L~-~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~  152 (285)
T cd05632          75 LCLVLTIMNGGDLK-FHIYNMG-NPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKI  152 (285)
T ss_pred             EEEEEEeccCccHH-HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceec
Confidence            58999999999998 5554332 12699999999999999999999999999999999    778899999999998665


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR  165 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  165 (302)
                      ... .......|+..|+|||++.   +..++.++|+||+||++|+|++|..||.+.........+...... ........
T Consensus       153 ~~~-~~~~~~~g~~~~~aPE~~~---~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~  227 (285)
T cd05632         153 PEG-ESIRGRVGTVGYMAPEVLN---NQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLE-TEEVYSAK  227 (285)
T ss_pred             CCC-CcccCCCCCcCccChHHhc---CCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhc-cccccCcc
Confidence            432 2223457899999999995   566889999999999999999999999877665444333322111 11223456


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCC-----HHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHH
Q psy3574         166 WSSTFHNFVKIALTKNPKKRPT-----ADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRV  231 (302)
Q Consensus       166 ~s~~~~~li~~~L~~dp~~R~t-----~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~  231 (302)
                      ++..+.+|+.+||+.||++||+     +.++++                          |+||+...+...
T Consensus       228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~--------------------------~~~~~~~~~~~~  272 (285)
T cd05632         228 FSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR--------------------------HPFFRNMNFKRL  272 (285)
T ss_pred             CCHHHHHHHHHHccCCHhHcCCCcccChHHHHc--------------------------ChhhhcCCHHHH
Confidence            7899999999999999999999     778888                          999997766543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=1.6e-32  Score=233.89  Aligned_cols=185  Identities=40%  Similarity=0.711  Sum_probs=149.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+++||+.+++|. +++....  ..+++..++.++.|++.||.|||+.|++|+||+|    ++.++
T Consensus        60 i~~~~~~~~~~~~~~l~~e~~~~~~L~-~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~  136 (256)
T cd06612          60 IVKYYGSYFKNTDLWIVMEYCGAGSVS-DIMKITN--KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEG  136 (256)
T ss_pred             EeeeeeeeecCCcEEEEEecCCCCcHH-HHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCC
Confidence            345555554    58999999999999 6765432  2789999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............++..|+|||++.   +..++.++|+||+||++|+|++|+.||...........+..
T Consensus       137 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~  213 (256)
T cd06612         137 QAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQ---EIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN  213 (256)
T ss_pred             cEEEcccccchhcccCccccccccCCccccCHHHHh---cCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc
Confidence            999999999987665433334456888999999985   55688999999999999999999999987665544433322


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .  ..+....+..++..+.++|.+||+.+|.+|||+.+++.
T Consensus       214 ~--~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         214 K--PPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             C--CCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            1  22233334567889999999999999999999999999

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=1.7e-32  Score=234.83  Aligned_cols=182  Identities=24%  Similarity=0.330  Sum_probs=148.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+|+||+++++|. +++....   .+++..+..++.||+.||+|||++|++|+||+|    ++.++
T Consensus        55 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~  130 (262)
T cd05572          55 IVKLYRTFKDKKYIYMLMEYCLGGELW-TILRDRG---LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNG  130 (262)
T ss_pred             EeeeeeeEEcCCccEEEEecCCCCcHH-HHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCC
Confidence            345555443    68999999999999 7777665   689999999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH--PMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~i  150 (302)
                      .++|+|||++....... ......++..|++||.+.   ...++.++|+||+|+++|+|++|..||....  .......+
T Consensus       131 ~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~PE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  206 (262)
T cd05572         131 YVKLVDFGFAKKLKSGQ-KTWTFCGTPEYVAPEIIL---NKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDI  206 (262)
T ss_pred             CEEEeeCCcccccCccc-ccccccCCcCccChhHhc---CCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHH
Confidence            99999999998775532 233456889999999985   5568899999999999999999999998766  44444444


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC-----HHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT-----ADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t-----~~~ll~  193 (302)
                      .....   ....+...+..+.++|.+||..+|.+|++     +.++++
T Consensus       207 ~~~~~---~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         207 LKGNG---KLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             hccCC---CCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence            42111   12223445889999999999999999999     999999

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=2e-32  Score=237.55  Aligned_cols=183  Identities=33%  Similarity=0.586  Sum_probs=150.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+|+||+.|++|. +++.. .   .+++..+..++.|++.||+|||++|++||||+|    ++.++
T Consensus        78 vv~~~~~~~~~~~~~~v~e~~~~~~L~-~~~~~-~---~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~  152 (285)
T cd06648          78 IVEMYSSYLVGDELWVVMEFLEGGALT-DIVTH-T---RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDG  152 (285)
T ss_pred             hheEEEEEEcCCeEEEEEeccCCCCHH-HHHHh-C---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCC
Confidence            355665543    58999999999999 77766 3   589999999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .++|+|||.+..............|+..|+|||.+.   +..++.++|+||+||++|+|++|+.||...+.......+..
T Consensus       153 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~  229 (285)
T cd06648         153 RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVIS---RLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRD  229 (285)
T ss_pred             cEEEcccccchhhccCCcccccccCCccccCHHHhc---CCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHh
Confidence            999999998876554333334456899999999985   55688999999999999999999999988777666655544


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .  .++.......++..+.+|+.+||..+|++||++.++++
T Consensus       230 ~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         230 N--LPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             c--CCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            3  22333333447889999999999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=2.3e-32  Score=237.01  Aligned_cols=182  Identities=38%  Similarity=0.617  Sum_probs=144.1

Q ss_pred             hheeEEEecCCcchHHHHHHhc-cccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccc
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSA   83 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~   83 (302)
                      ..|+||||++||+|. .++... .....+++..++.++.|++.||.|||+++++||||+|    ++.++.+||+|||++.
T Consensus        94 ~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~  172 (286)
T cd06638          94 QLWLVLELCNGGSVT-DLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSA  172 (286)
T ss_pred             eEEEEEeecCCCCHH-HHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCcee
Confidence            368999999999999 665421 1123688899999999999999999999999999999    7788899999999987


Q ss_pred             ccccccccccccccCcccchhhccccc--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCC
Q psy3574          84 QITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK  161 (302)
Q Consensus        84 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  161 (302)
                      .............|+..|+|||++.+.  ....++.++|+||+||++|+|++|+.||...........+...  ..+...
T Consensus       173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~--~~~~~~  250 (286)
T cd06638         173 QLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN--PPPTLH  250 (286)
T ss_pred             ecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc--CCCccc
Confidence            765432333445689999999998521  1344788999999999999999999999877665544333222  222333


Q ss_pred             CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         162 DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       162 ~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+..++..+.++|.+||+.+|++||++.++++
T Consensus       251 ~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~  282 (286)
T cd06638         251 QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQ  282 (286)
T ss_pred             CCCCcCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            34557889999999999999999999999999

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=3.2e-32  Score=233.66  Aligned_cols=182  Identities=25%  Similarity=0.415  Sum_probs=148.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++++|. .++...+   .+++..+..++.|++.||.|||++|++||||+|    ++.++
T Consensus        68 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~  143 (267)
T cd06628          68 IVQYLGSSLDADHLNIFLEYVPGGSVA-ALLNNYG---AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKG  143 (267)
T ss_pred             eeeEEEEEEeCCccEEEEEecCCCCHH-HHHHhcc---CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCC
Confidence            345555444    58999999999999 7887766   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccc------cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH
Q psy3574          73 DVKLADFGVSAQITATIN------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRA  146 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  146 (302)
                      .+||+|||.++.......      ......|+..|+|||.+.   ...++.++|+||+||++|+|++|+.||...+....
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~---~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~  220 (267)
T cd06628         144 GIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVK---QTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA  220 (267)
T ss_pred             CEEecccCCCcccccccccCCccccccccCCCcCccChhHhc---cCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH
Confidence            999999999887653211      112345788999999985   55678899999999999999999999987766554


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         147 LFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       147 ~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...+....  .+  ..+..++..+.++|.+||+.+|.+||++.++++
T Consensus       221 ~~~~~~~~--~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         221 IFKIGENA--SP--EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             HHHHhccC--CC--cCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            44433321  11  123567899999999999999999999999999

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=5e-32  Score=237.26  Aligned_cols=197  Identities=24%  Similarity=0.285  Sum_probs=158.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||++||+|. .++...+   .+++..+..++.|++.||+|||++|++||||+|    ++..+
T Consensus        63 i~~~~~~~~~~~~~~lv~e~~~g~~L~-~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~  138 (305)
T cd05609          63 VVSMFCSFETKRHLCMVMEYVEGGDCA-TLLKNIG---ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMG  138 (305)
T ss_pred             eeeeEEEEecCCEEEEEEecCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCC
Confidence            455665444    58999999999999 8887766   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccc---------------cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCC
Q psy3574          73 DVKLADFGVSAQITATIN---------------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPP  137 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~---------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p  137 (302)
                      .+||+|||.++.......               ......++..|+|||.+.   ...++.++|+|||||++|+|++|..|
T Consensus       139 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~vl~el~~g~~p  215 (305)
T cd05609         139 HIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVIL---RQGYGKPVDWWAMGIILYEFLVGCVP  215 (305)
T ss_pred             CEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhcc---CCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            999999998863211000               011235788899999985   56688999999999999999999999


Q ss_pred             CCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC---HHHHHHHHHHHhHHHHHHhhhCCCCCC
Q psy3574         138 MFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT---ADKLLQVILIHRARVAAVERKGGYNQQ  214 (302)
Q Consensus       138 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t---~~~ll~~l~~~~~~~~~~~~~~~~~~~  214 (302)
                      |.+.........+.......+..  ...++..+.++|.+||+.+|++||+   +.++++                     
T Consensus       216 f~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~---------------------  272 (305)
T cd05609         216 FFGDTPEELFGQVISDDIEWPEG--DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ---------------------  272 (305)
T ss_pred             CCCCCHHHHHHHHHhcccCCCCc--cccCCHHHHHHHHHHhccChhhccCccCHHHHHh---------------------
Confidence            98887776666665544333321  2357899999999999999999998   688888                     


Q ss_pred             ccccCCCccccchhhHHH
Q psy3574         215 CDIWAHPFFKYDMSKRVA  232 (302)
Q Consensus       215 ~~i~~hp~f~~~~~~~~~  232 (302)
                           ||||....+....
T Consensus       273 -----~~~~~~~~~~~~~  285 (305)
T cd05609         273 -----HRFFLGLDWNGLL  285 (305)
T ss_pred             -----CccccCCCHHHHh
Confidence                 9999877766543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-32  Score=239.98  Aligned_cols=185  Identities=22%  Similarity=0.288  Sum_probs=149.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+.|++|. +++.... +..+++..++.++.|++.||+|||+.|++|+||||    ++.++
T Consensus        63 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~  140 (316)
T cd05574          63 LPTLYASFQTETYLCLVMDYCPGGELF-RLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESG  140 (316)
T ss_pred             chhheeeeecCCEEEEEEEecCCCCHH-HHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCC
Confidence            456666554    58999999999999 7776532 23689999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccc-----------------------------cccccccCcccchhhcccccccCCCCchhhHHH
Q psy3574          73 DVKLADFGVSAQITATIN-----------------------------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWA  123 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Diws  123 (302)
                      .++|+|||++........                             ......|+..|+|||++.   +..++.++||||
T Consensus       141 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Di~s  217 (316)
T cd05574         141 HIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVIS---GDGHGSAVDWWT  217 (316)
T ss_pred             CEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHc---CCCCCchHHHHH
Confidence            999999999865432110                             112346788999999995   566889999999


Q ss_pred             HHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC----HHHHHH
Q psy3574         124 VGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT----ADKLLQ  193 (302)
Q Consensus       124 lG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t----~~~ll~  193 (302)
                      ||+++|+|++|..||.+.+.......+.......+.   ...++..+.++|.+||..+|++||+    ++++++
T Consensus       218 lG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         218 LGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPG---SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             HHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCC---ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            999999999999999888777666666544332222   2337899999999999999999999    999999

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=3.4e-32  Score=233.34  Aligned_cols=184  Identities=28%  Similarity=0.419  Sum_probs=148.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+|+||++|++|. +++....   ++++..+..++.|++.||+|||+.|++|+||+|    ++.++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~  139 (265)
T cd06631          64 IVQYLGTCLDDNTISIFMEFVPGGSIS-SILNRFG---PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNG  139 (265)
T ss_pred             EeeEeeEeecCCeEEEEEecCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCC
Confidence            345555443    58999999999999 7777766   789999999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccc------cccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH
Q psy3574          73 DVKLADFGVSAQITAT------INKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRA  146 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  146 (302)
                      .+||+|||++......      ........|+..|+|||.+.   +..++.++|+|||||++|+|++|..||...+....
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~  216 (265)
T cd06631         140 IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVIN---ESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA  216 (265)
T ss_pred             eEEeccchhhHhhhhccccccccccccccCCCccccChhhhc---CCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH
Confidence            9999999998765321      11122346888999999985   56688999999999999999999999987766555


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         147 LFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       147 ~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...+.......+  ..+..++.++.++|.+||..+|.+||++.++++
T Consensus       217 ~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         217 MFYIGAHRGLMP--RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             HHHhhhccCCCC--CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            444433221222  224567899999999999999999999999999

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2.8e-32  Score=263.01  Aligned_cols=186  Identities=23%  Similarity=0.274  Sum_probs=146.0

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhc-cccccccccchhHHHhhHHHHHHHHHhC-------CCCCCCCc
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSKS-------GFKPPALK   66 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~-------~i~Hrdlk   66 (302)
                      ||++++.|.      +||||||+.+|+|. .++... .....+++..++.|+.||+.||.|||+.       +|+|||||
T Consensus        74 IVrl~d~f~de~~~~lyIVMEY~~gGSL~-~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLK  152 (1021)
T PTZ00266         74 IVRYIDRFLNKANQKLYILMEFCDAGDLS-RNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLK  152 (1021)
T ss_pred             cCeEEEEEEecCCCEEEEEEeCCCCCcHH-HHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCc
Confidence            678888764      58999999999999 666542 1112699999999999999999999984       49999999


Q ss_pred             C----CC-----------------CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHH
Q psy3574          67 D----KD-----------------RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG  125 (302)
Q Consensus        67 p----~~-----------------~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG  125 (302)
                      |    +.                 ..+.+||+|||++...... ......+||+.|+|||++... ...++.++||||||
T Consensus       153 PeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~-s~~~s~vGTp~YmAPEvL~ge-~~~~s~KSDVWSLG  230 (1021)
T PTZ00266        153 PQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIE-SMAHSCVGTPYYWSPELLLHE-TKSYDDKSDMWALG  230 (1021)
T ss_pred             HHHeEeecCccccccccccccccCCCCceEEccCCcccccccc-ccccccCCCccccCHHHHhcc-CCCCCchhHHHHHH
Confidence            9    32                 2345899999999766443 223345799999999998522 34578999999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         126 ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       126 ~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      |++|+|++|..||........+..........+    ...++..+.+||..||..+|.+||++.++|.
T Consensus       231 ~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp----i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        231 CIIYELCSGKTPFHKANNFSQLISELKRGPDLP----IKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             HHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC----cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            999999999999987666555544444332222    1346889999999999999999999999999

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=2.6e-32  Score=234.20  Aligned_cols=186  Identities=24%  Similarity=0.345  Sum_probs=145.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .++|+||++|++|. +++....   ++++..+..++.||+.||+|||++|++|+||+|    ++.++
T Consensus        65 iv~~~~~~~~~~~~~~v~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~  140 (268)
T cd06630          65 IIRMLGATCEDSHFNLFVEWMAGGSVS-HLLSKYG---AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTG  140 (268)
T ss_pred             eehhhceeccCCeEEEEEeccCCCcHH-HHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            466777655    58999999999999 7777666   799999999999999999999999999999999    54444


Q ss_pred             -CEEEecccccccccccccc----ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy3574          73 -DVKLADFGVSAQITATINK----RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRAL  147 (302)
Q Consensus        73 -~ikL~DFg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  147 (302)
                       .+||+|||.+.........    .....++..|+|||.+.   ...++.++|+||+||++|+|++|..||.........
T Consensus       141 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~---~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~  217 (268)
T cd06630         141 QRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLR---GEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL  217 (268)
T ss_pred             CEEEEcccccccccccccccCCccccccccccceeCHhHhc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH
Confidence             6999999998776543211    12346788999999985   566889999999999999999999999754433222


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         148 FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+............+..++..+.+++.+||..+|.+||++.++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         218 ALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             HHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            2222211111112234567899999999999999999999999999

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=2.2e-32  Score=236.94  Aligned_cols=186  Identities=21%  Similarity=0.261  Sum_probs=146.6

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.+.    .|+||||++++.|. .++....   .+++..++.++.||+.||.|||+.|++||||+|    ++.++.
T Consensus        63 ~~~~~~~~~~~~~~~v~e~~~~~~l~-~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~  138 (286)
T cd07847          63 VNLIEVFRRKRKLHLVFEYCDHTVLN-ELEKNPR---GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQ  138 (286)
T ss_pred             eeeeeEEeeCCEEEEEEeccCccHHH-HHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCc
Confidence            45555544    58999999998887 7766555   699999999999999999999999999999999    888899


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      +||+|||++..............++..|+|||.+.+  ...++.++|+||+||++|+|++|..||.+....+....+...
T Consensus       139 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~  216 (286)
T cd07847         139 IKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVG--DTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKT  216 (286)
T ss_pred             EEECccccceecCCCcccccCcccccccCCHHHHhC--CCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            999999999876554333334567889999999852  345788999999999999999999999877765554443321


Q ss_pred             CC-------------------CCCCC-------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         154 GF-------------------KPPAL-------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       154 ~~-------------------~~~~~-------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..                   ..+..       .....++..+.+||.+||..+|++||++.+++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         217 LGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             hCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            00                   00000       001346788999999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=1.3e-32  Score=240.06  Aligned_cols=183  Identities=34%  Similarity=0.590  Sum_probs=148.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.|.    .|+||||++|++|. .++...    .+++.++..++.|++.||.|||+.|++||||+|    ++.++
T Consensus        78 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~  152 (297)
T cd06656          78 IVNYLDSYLVGDELWVVMEYLAGGSLT-DVVTET----CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDG  152 (297)
T ss_pred             EeeEEEEEecCCEEEEeecccCCCCHH-HHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            356666554    58999999999999 776543    488899999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .++|+|||++..............+++.|+|||.+.   ...++.++|+||+||++|+|++|..||...+.......+..
T Consensus       153 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~  229 (297)
T cd06656         153 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT---RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT  229 (297)
T ss_pred             CEEECcCccceEccCCccCcCcccCCccccCHHHHc---CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc
Confidence            999999999876554333333456889999999985   56678999999999999999999999987665444333322


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..  .+....+..++..+.+|+.+||..+|++||++.++++
T Consensus       230 ~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         230 NG--TPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             CC--CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            22  2222334567889999999999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.98  E-value=4.4e-32  Score=248.66  Aligned_cols=186  Identities=19%  Similarity=0.229  Sum_probs=139.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+|||++. ++|. .++....  ..+++..++.++.||+.||.|||++||+||||||    ++.++
T Consensus       222 Iv~l~~~~~~~~~~~lv~e~~~-~~L~-~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~  297 (461)
T PHA03211        222 VLALLDVRVVGGLTCLVLPKYR-SDLY-TYLGARL--RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPE  297 (461)
T ss_pred             CCcEEEEEEECCEEEEEEEccC-CCHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCC
Confidence            577777654    589999996 4888 5554432  1699999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------
Q psy3574          73 DVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH--------  142 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------  142 (302)
                      .+||+|||+++.......  ......||..|+|||++.   +..++.++|||||||++|||++|..|+....        
T Consensus       298 ~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~---~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~  374 (461)
T PHA03211        298 DICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLA---GDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPY  374 (461)
T ss_pred             CEEEcccCCceecccccccccccccCCCcCCcCHHHHc---CCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCc
Confidence            999999999976543211  122456999999999996   5668999999999999999999887654321        


Q ss_pred             hHHHHHHHHhcCCCCCC-----------------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         143 PMRALFLMSKSGFKPPA-----------------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       143 ~~~~~~~i~~~~~~~~~-----------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .......+...+.....                             +.....++..+.+||.+||+.||.+|||+.|+|+
T Consensus       375 ~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~  454 (461)
T PHA03211        375 DAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR  454 (461)
T ss_pred             HHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence            12222222222111000                             0001134668999999999999999999999999

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.98  E-value=6e-32  Score=231.12  Aligned_cols=183  Identities=22%  Similarity=0.302  Sum_probs=149.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+|+||+.+++|. .++...+   .+++..+..++.||+.||+|||++|++|+||+|    ++.++
T Consensus        55 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~  130 (265)
T cd05579          55 VVKLYYSFQGKKNLYLVMEYLPGGDLA-SLLENVG---SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNG  130 (265)
T ss_pred             hhHHHHheecCcEEEEEEecCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCC
Confidence            345555444    58999999999999 7887766   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccc--------cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH
Q psy3574          73 DVKLADFGVSAQITATIN--------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM  144 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  144 (302)
                      .++|+|||++........        ......++..|++||...   ...++.++|+||||+++|+|++|..||......
T Consensus       131 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~  207 (265)
T cd05579         131 HLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVIL---GQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE  207 (265)
T ss_pred             CEEEEecccchhcccCcccccccccccccCcccCccccCHHHhc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence            999999999876543211        223346788999999985   444788999999999999999999999888777


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH---HHHHH
Q psy3574         145 RALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA---DKLLQ  193 (302)
Q Consensus       145 ~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~---~~ll~  193 (302)
                      .....+.......+.   ...++..+.+++.+||+.+|.+|||+   .++++
T Consensus       208 ~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         208 EIFQNILNGKIEWPE---DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             HHHHHHhcCCcCCCc---cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            766665553333222   12258999999999999999999999   99999

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.98  E-value=3.3e-32  Score=240.78  Aligned_cols=190  Identities=23%  Similarity=0.306  Sum_probs=141.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    .|+||||+++|+|. +++.... ...+++..++.++.|++.||+|||++||+||||||    ++.++
T Consensus        61 iv~~~~~~~~~~~~~lv~e~~~~~~l~-~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~  138 (327)
T cd08227          61 IVPYRATFIADNELWVVTSFMAYGSAK-DLICTHF-MDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG  138 (327)
T ss_pred             eeeEEEEEEECCEEEEEEeccCCCcHH-HHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCC
Confidence            567777665    58999999999999 7775432 12589999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccc-------cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          73 DVKLADFGVSAQITATIN-------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                      .++++||+.+........       ......++..|+|||++... ...++.++||||+||++|+|++|+.||.......
T Consensus       139 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  217 (327)
T cd08227         139 KVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQN-LQGYDAKSDIYSVGITACELANGHVPFKDMPATQ  217 (327)
T ss_pred             cEEEcccchhhccccccccccccccccccccceecccChHHhhcc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH
Confidence            999999986544322111       01123467789999998521 2458899999999999999999999997655443


Q ss_pred             HHHHHHhcCCCC-----------------------------------------CCCCCCCCCCHHHHHHHHHhhhcCCCC
Q psy3574         146 ALFLMSKSGFKP-----------------------------------------PALKDKDRWSSTFHNFVKIALTKNPKK  184 (302)
Q Consensus       146 ~~~~i~~~~~~~-----------------------------------------~~~~~~~~~s~~~~~li~~~L~~dp~~  184 (302)
                      ............                                         ........+++.+.+||.+||+.||++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~  297 (327)
T cd08227         218 MLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDA  297 (327)
T ss_pred             HHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchh
Confidence            332222211000                                         000011235778999999999999999


Q ss_pred             CCCHHHHHH
Q psy3574         185 RPTADKLLQ  193 (302)
Q Consensus       185 R~t~~~ll~  193 (302)
                      |||+.++++
T Consensus       298 Rpt~~ell~  306 (327)
T cd08227         298 RPSASTLLN  306 (327)
T ss_pred             cCCHHHHhc
Confidence            999999999

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.98  E-value=5.4e-32  Score=231.93  Aligned_cols=181  Identities=34%  Similarity=0.516  Sum_probs=145.1

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+|||+++|++|. .++........+++..++.++.|++.||+|||+.|++||||+|    +++++.+||+|||++...
T Consensus        74 ~~iv~e~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~  152 (267)
T cd06610          74 LWLVMPYLSGGSLL-DIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASL  152 (267)
T ss_pred             EEEEEeccCCCcHH-HHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHh
Confidence            58999999999999 7776543112589999999999999999999999999999999    778899999999998776


Q ss_pred             cccccc----ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCC-
Q psy3574          86 TATINK----RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL-  160 (302)
Q Consensus        86 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~-  160 (302)
                      ......    .....|+..|+|||.+.  ....++.++|+||+||++|+|++|+.||...+.......+.......... 
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~--~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  230 (267)
T cd06610         153 ADGGDRTRKVRKTFVGTPCWMAPEVME--QVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETG  230 (267)
T ss_pred             ccCccccccccccccCChhhcChHHHc--cccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCc
Confidence            543222    23446889999999986  22367899999999999999999999998877665555554432111111 


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         161 KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       161 ~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....++..+.+++.+||..||++||++.++++
T Consensus       231 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         231 ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            112367899999999999999999999999999

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.98  E-value=8.4e-32  Score=233.33  Aligned_cols=187  Identities=21%  Similarity=0.303  Sum_probs=147.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+|+||++++.|. .+.....   .+++.++..++.||+.||+|||+.|++|+|++|    ++.++
T Consensus        62 i~~~~~~~~~~~~~~lv~e~~~~~~l~-~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~  137 (286)
T cd07846          62 LVNLIEVFRRKKRLYLVFEFVDHTVLD-DLEKYPN---GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSG  137 (286)
T ss_pred             hhhHHHhcccCCeEEEEEecCCccHHH-HHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC
Confidence            456666654    59999999998888 6666555   689999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .++|+|||++..............++..|+|||++.  ....++.++||||+||++|+|++|++||......+....+..
T Consensus       138 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~  215 (286)
T cd07846         138 VVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLV--GDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIK  215 (286)
T ss_pred             cEEEEeeeeeeeccCCccccCcccceeeccCcHHhc--cccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHH
Confidence            999999999887655433344556889999999985  234467899999999999999999999977665444433332


Q ss_pred             cCCC-------------------CCCC-------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFK-------------------PPAL-------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~-------------------~~~~-------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....                   .+..       .....++..+.+|+.+||..+|++||++.++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         216 CLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             HhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence            1000                   0000       012356888999999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.98  E-value=5.5e-32  Score=237.36  Aligned_cols=183  Identities=25%  Similarity=0.415  Sum_probs=144.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh-CCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK-SGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.+.    +|+||||++|++|. .++....   .+++..+..++.|++.||.|||+ .+++||||+|    ++.+
T Consensus        61 iv~~~~~~~~~~~~~lv~ey~~~~~L~-~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~  136 (308)
T cd06615          61 IVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAG---RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSR  136 (308)
T ss_pred             CCeEEEEEeeCCEEEEEeeccCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecC
Confidence            466776555    58999999999999 8887766   79999999999999999999998 5999999999    7788


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +.+||+|||++......  ......|+..|+|||.+.   +..++.++|+||+||++|+|++|+.||...+.......+.
T Consensus       137 ~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~aPE~~~---~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~  211 (308)
T cd06615         137 GEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQ---GTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFG  211 (308)
T ss_pred             CcEEEccCCCccccccc--ccccCCCCcCccChhHhc---CCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhc
Confidence            99999999998765432  223457899999999985   5568899999999999999999999987554333222111


Q ss_pred             hcC----------------------------------CCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSG----------------------------------FKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~----------------------------------~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...                                  ...+.. ....++.++++|+.+||..+|++||++.++++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  286 (308)
T cd06615         212 RPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKL-PSGAFSDEFQDFVDKCLKKNPKERADLKELTK  286 (308)
T ss_pred             CccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccC-cCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            100                                  000111 11236788999999999999999999999999

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.98  E-value=9.4e-32  Score=234.14  Aligned_cols=180  Identities=21%  Similarity=0.238  Sum_probs=139.0

Q ss_pred             heeEEEecCCcchHHHHHHhccc--cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC-CCCEEEeccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGIT--AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR-CGDVKLADFGVS   82 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~-~~~ikL~DFg~a   82 (302)
                      .|+||||+++ +|. .++.....  +..+++..++.++.||+.||.|||++||+||||+|    ++. ++.+||+|||.+
T Consensus        81 ~~lv~e~~~~-~l~-~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~  158 (295)
T cd07837          81 LYLVFEYLDS-DLK-KFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG  158 (295)
T ss_pred             EEEEeeccCc-CHH-HHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence            5899999987 788 55543221  23589999999999999999999999999999999    665 889999999998


Q ss_pred             cccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC---
Q psy3574          83 AQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPA---  159 (302)
Q Consensus        83 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~---  159 (302)
                      ..............+++.|+|||.+.  ....++.++|+||+|+++|+|++|..||.+.........+......+..   
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (295)
T cd07837         159 RAFSIPVKSYTHEIVTLWYRAPEVLL--GSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW  236 (295)
T ss_pred             eecCCCccccCCcccccCCCChHHhh--CCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhC
Confidence            76544323333345788899999885  2345789999999999999999999999887766655444331111100   


Q ss_pred             --------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         160 --------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       160 --------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                          ......++..+.+||.+||..||.+||++.+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         237 PGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             cchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence                                0011347889999999999999999999999999

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.98  E-value=1.2e-31  Score=232.10  Aligned_cols=187  Identities=14%  Similarity=0.197  Sum_probs=149.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-------------cccccccchhHHHhhHHHHHHHHHhCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-------------AIELAELQPPMFDLHPMRALFLMSKSGFKPP   63 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hr   63 (302)
                      |+++++.+.    .|++|||+++|+|. +++.....             ...+++..+..++.|++.||+|||++|++||
T Consensus        70 i~~~~~~~~~~~~~~~~~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~  148 (283)
T cd05048          70 IVCLLGVCTKEQPTCMLFEYLAHGDLH-EFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHR  148 (283)
T ss_pred             cceEEEEEcCCCceEEEEecCCCCcHH-HHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence            355555544    58999999999999 77765420             0257778889999999999999999999999


Q ss_pred             CCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCC
Q psy3574          64 ALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQP  136 (302)
Q Consensus        64 dlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~  136 (302)
                      ||||    +++++.+||+|||++........  ......+++.|+|||.+.   ...++.++|||||||++|+|++ |..
T Consensus       149 dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~sDv~slG~il~el~~~g~~  225 (283)
T cd05048         149 DLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAIL---YGKFTTESDIWSFGVVLWEIFSYGLQ  225 (283)
T ss_pred             ccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhc---cCcCchhhhHHHHHHHHHHHHcCCCC
Confidence            9999    77889999999999876533211  122345678899999985   5568899999999999999998 999


Q ss_pred             CCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         137 PMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       137 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ||.+....+....+......    ..+..++.++.+|+.+||+.||.+||++.++++++
T Consensus       226 p~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l  280 (283)
T cd05048         226 PYYGFSNQEVIEMIRSRQLL----PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRL  280 (283)
T ss_pred             CCCCCCHHHHHHHHHcCCcC----CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            99988877766665543322    12466899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.98  E-value=9e-32  Score=236.04  Aligned_cols=187  Identities=21%  Similarity=0.210  Sum_probs=145.6

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      |+++++.+.      .|+||||+.+ +|. .++....  ..+++.+++.++.||+.||+|||+.|++||||+|    ++.
T Consensus        68 i~~~~~~~~~~~~~~~~lv~e~~~~-~l~-~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~  143 (309)
T cd07845          68 IVELKEVVVGKHLDSIFLVMEYCEQ-DLA-SLLDNMP--TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTD  143 (309)
T ss_pred             CcceEEEEecCCCCeEEEEEecCCC-CHH-HHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC
Confidence            355555432      5899999976 787 5555432  2799999999999999999999999999999999    888


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      .+.+||+|||.+..............++..|+|||.+.  ....++.++|+||+||++|+|++|.+||.+.+....+..+
T Consensus       144 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~  221 (309)
T cd07845         144 KGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLL--GCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLI  221 (309)
T ss_pred             CCCEEECccceeeecCCccCCCCcccccccccChhhhc--CCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            89999999999987654322333334678899999985  2345789999999999999999999999988877776665


Q ss_pred             HhcCCCCCCC----------------C---------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPAL----------------K---------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~----------------~---------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ......+...                .         ....+++.+.+||.+||+.||++|||+++++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         222 IQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             HHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            5422111000                0         01225888999999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.98  E-value=1.5e-31  Score=228.03  Aligned_cols=184  Identities=27%  Similarity=0.455  Sum_probs=152.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.|.    .++||||+++|+|. +++.... ...+++.++..++.|++.||.|||+.|++|+||+|    ++.++
T Consensus        61 i~~~~~~~~~~~~~~~~~e~~~~~~L~-~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~  138 (256)
T cd08221          61 IIAYYNHFMDDNTLLIEMEYANGGTLY-DKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG  138 (256)
T ss_pred             eeEEEeEEecCCeEEEEEEecCCCcHH-HHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCC
Confidence            456666555    58999999999999 6666542 12689999999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............++..|+|||.+.   +..++.++|+||+|+++|+|++|..||......+....+..
T Consensus       139 ~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~---~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~  215 (256)
T cd08221         139 LIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQ---GVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQ  215 (256)
T ss_pred             CEEECcCcceEEcccccccccccCCCccccCHhhcC---CCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc
Confidence            999999999877655433334557899999999985   55578899999999999999999999988777777766655


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+.    ...++.++.++|.+||..+|.+||++.++++
T Consensus       216 ~~~~~~----~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~  252 (256)
T cd08221         216 GNYTPV----VSVYSSELISLVHSLLQQDPEKRPTADEVLD  252 (256)
T ss_pred             CCCCCC----ccccCHHHHHHHHHHcccCcccCCCHHHHhh
Confidence            433221    2567899999999999999999999999999

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.98  E-value=6.1e-32  Score=233.38  Aligned_cols=181  Identities=41%  Similarity=0.696  Sum_probs=147.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++++|. .++..+    .+++..++.++.|++.||.|||++|++|+||+|    ++.++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~  138 (277)
T cd06642          64 ITRYYGSYLKGTKLWIIMEYLGGGSAL-DLLKPG----PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG  138 (277)
T ss_pred             cHhhhcccccCCceEEEEEccCCCcHH-HHhhcC----CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCC
Confidence            466666655    69999999999999 776543    589999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .++|+|||++..+...........++..|+|||.+.   +..++.++|+|||||++|+|++|..||...........+..
T Consensus       139 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~  215 (277)
T cd06642         139 DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIK---QSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPK  215 (277)
T ss_pred             CEEEccccccccccCcchhhhcccCcccccCHHHhC---cCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhc
Confidence            999999999877654333333456888999999985   55688999999999999999999999976665554443322


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..  .+.  ....++..+.++|.+||..+|++||++.++++
T Consensus       216 ~~--~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         216 NS--PPT--LEGQYSKPFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             CC--CCC--CCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            21  111  23456889999999999999999999999999

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.98  E-value=8.9e-32  Score=236.74  Aligned_cols=189  Identities=20%  Similarity=0.211  Sum_probs=134.9

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhcc------ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGI------TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-   67 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~------~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-   67 (302)
                      ||++++.+.      .|+||||+.+ +|. +++....      ....+++..++.++.||+.||.|||++||+|||||| 
T Consensus        60 iv~~~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~  137 (317)
T cd07867          60 VIALQKVFLSHSDRKVWLLFDYAEH-DLW-HIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPA  137 (317)
T ss_pred             eeeEEEEEeccCCCeEEEEEeeeCC-cHH-HHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHH
Confidence            355555442      4899999986 777 5554221      112478888999999999999999999999999999 


Q ss_pred             ---C----CCCCCEEEeccccccccccccc---cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCC
Q psy3574          68 ---K----DRCGDVKLADFGVSAQITATIN---KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPP  137 (302)
Q Consensus        68 ---~----~~~~~ikL~DFg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p  137 (302)
                         +    +..+.+||+|||+++.......   ......||..|+|||++.  ....++.++||||+||++|+|++|++|
T Consensus       138 Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwSlG~il~el~tg~~~  215 (317)
T cd07867         138 NILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL--GARHYTKAIDIWAIGCIFAELLTSEPI  215 (317)
T ss_pred             HEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhc--CCCccCcHHHHHhHHHHHHHHHhCCCC
Confidence               3    5678999999999987654321   223456899999999985  234578999999999999999999999


Q ss_pred             CCCCChH---------HHHHHHHhcCCCC----------------------------CC-----CCCCCCCCHHHHHHHH
Q psy3574         138 MFDLHPM---------RALFLMSKSGFKP----------------------------PA-----LKDKDRWSSTFHNFVK  175 (302)
Q Consensus       138 f~~~~~~---------~~~~~i~~~~~~~----------------------------~~-----~~~~~~~s~~~~~li~  175 (302)
                      |......         .....+......+                            ..     .......+..+.+||.
T Consensus       216 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  295 (317)
T cd07867         216 FHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQ  295 (317)
T ss_pred             cccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHH
Confidence            9643211         1111111100000                            00     0001123567899999


Q ss_pred             HhhhcCCCCCCCHHHHHH
Q psy3574         176 IALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       176 ~~L~~dp~~R~t~~~ll~  193 (302)
                      +||+.||.+|||+.++|+
T Consensus       296 ~~l~~dP~~R~t~~e~l~  313 (317)
T cd07867         296 KLLTMDPTKRITSEQALQ  313 (317)
T ss_pred             HHhccCcccccCHHHHhc
Confidence            999999999999999999

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.98  E-value=1.2e-31  Score=231.61  Aligned_cols=180  Identities=40%  Similarity=0.697  Sum_probs=147.3

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.+.    .|+||||++||+|. +++..+    ++++..+..++.|++.||+|||+++++|+||+|    ++.++.
T Consensus        65 ~~~~~~~~~~~~~~lv~e~~~~~~L~-~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~  139 (277)
T cd06640          65 TKYYGSYLKGTKLWIIMEYLGGGSAL-DLLRAG----PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGD  139 (277)
T ss_pred             eeEEEEEEECCEEEEEEecCCCCcHH-HHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCC
Confidence            45555444    69999999999999 776543    588999999999999999999999999999999    888899


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      ++|+|||++..............++..|+|||++.   +..++.++|+|||||++|+|++|..||...........+...
T Consensus       140 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~---~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~  216 (277)
T cd06640         140 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQ---QSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN  216 (277)
T ss_pred             EEEcccccceeccCCccccccccCcccccCHhHhc---cCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcC
Confidence            99999999977654433333456788999999985   556789999999999999999999999887766555444322


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       154 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .  ++  .....++..+.+++.+||..+|++||++.++++
T Consensus       217 ~--~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06640         217 N--PP--TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLK  252 (277)
T ss_pred             C--CC--CCchhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence            1  11  123456889999999999999999999999999

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.97  E-value=9.7e-32  Score=232.18  Aligned_cols=185  Identities=21%  Similarity=0.253  Sum_probs=143.0

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.|.    .|+||||+++++|. +++..... ..+++..+..++.|++.||.|||++|++||||+|    ++.++.
T Consensus        56 ~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~  133 (277)
T cd05577          56 VSLAYAFETKDDLCLVMTLMNGGDLK-YHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGN  133 (277)
T ss_pred             eeeeeEEecCCeEEEEEecCCCCcHH-HHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC
Confidence            44444433    58999999999999 55544321 2589999999999999999999999999999999    888899


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      +||+|||.+...... .......++..|+|||++.   +..++.++|+||+||++|+|++|+.||...........+...
T Consensus       134 ~~l~dfg~~~~~~~~-~~~~~~~~~~~y~~PE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  209 (277)
T cd05577         134 VRISDLGLAVELKGG-KKIKGRAGTPGYMAPEVLQ---GEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRR  209 (277)
T ss_pred             EEEccCcchhhhccC-CccccccCCCCcCCHHHhc---CCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhc
Confidence            999999998765442 2233446788999999985   455889999999999999999999999765442222222221


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHH
Q psy3574         154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQ  193 (302)
Q Consensus       154 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~  193 (302)
                      ... .....+..+++.+.++|.+||+.+|.+||     ++.++++
T Consensus       210 ~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         210 TLE-MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             ccc-ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence            111 11123456799999999999999999999     8888999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1e-31  Score=231.81  Aligned_cols=182  Identities=35%  Similarity=0.618  Sum_probs=146.4

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.+.    .|+||||++|++|. +++..+    .+++..+..++.|++.||.|||+.|++|+||+|    ++.++.
T Consensus        65 i~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~  139 (277)
T cd06917          65 TKYYGSYLKGPRLWIIMEYAEGGSVR-TLMKAG----PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGN  139 (277)
T ss_pred             eeEeeeeeeCCEEEEEEecCCCCcHH-HHHHcc----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCC
Confidence            44555443    58999999999999 777553    589999999999999999999999999999999    778999


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      ++|+|||.+..............|+..|+|||.+.  .+..++.++|+|||||++|+|++|..||.+.........+...
T Consensus       140 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~  217 (277)
T cd06917         140 VKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVIT--EGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS  217 (277)
T ss_pred             EEEccCCceeecCCCccccccccCCcceeCHHHhc--cCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC
Confidence            99999999987765433344557889999999985  2445788999999999999999999999877655444333222


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       154 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                        .++... ...++.++.+++.+||+.||++||++.+++.
T Consensus       218 --~~~~~~-~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         218 --KPPRLE-DNGYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             --CCCCCC-cccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence              122211 2237889999999999999999999999999

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.97  E-value=1.1e-31  Score=230.36  Aligned_cols=173  Identities=25%  Similarity=0.452  Sum_probs=140.0

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .++++||+++++|. .++....   .+++..++.++.|++.||+|||+++++||||+|    ++.++.+||+|||++...
T Consensus        81 ~~l~~e~~~~~~L~-~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~  156 (266)
T cd06651          81 LTIFMEYMPGGSVK-DQLKAYG---ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRL  156 (266)
T ss_pred             EEEEEeCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence            58999999999999 7776665   689999999999999999999999999999999    778899999999998765


Q ss_pred             cccc---ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCC
Q psy3574          86 TATI---NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD  162 (302)
Q Consensus        86 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  162 (302)
                      ....   .......++..|+|||.+.   ...++.++|+||+||++|+|++|+.||...........+.....   ....
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~---~~~~  230 (266)
T cd06651         157 QTICMSGTGIRSVTGTPYWMSPEVIS---GEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPT---NPQL  230 (266)
T ss_pred             ccccccCCccccCCccccccCHHHhC---CCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCC---CCCC
Confidence            4311   1122345788999999985   55678999999999999999999999987765555544433221   1222


Q ss_pred             CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         163 KDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       163 ~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +..++..+.++| +||..+|++||+++++++
T Consensus       231 ~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         231 PSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            355788899999 677789999999999999

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.97  E-value=1.3e-32  Score=234.80  Aligned_cols=186  Identities=27%  Similarity=0.434  Sum_probs=145.3

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.+.    .|+||||+.+++|. .++....   .+++.++..++.||+.||++||++|++|+||+|    ++.++.
T Consensus        61 ~~~~~~~~~~~~~~~v~~~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~  136 (260)
T PF00069_consen   61 VQILDVFQDDNYLYIVMEYCPGGSLQ-DYLQKNK---PLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGE  136 (260)
T ss_dssp             CHEEEEEEESSEEEEEEEEETTEBHH-HHHHHHS---SBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSE
T ss_pred             cccccccccccccccccccccccccc-ccccccc---ccccccccccccccccccccccccccccccccccccccccccc
Confidence            45555544    58999999999999 8887555   799999999999999999999999999999999    788999


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      ++|+|||.+..............++..|+|||++.  ....++.++|+||||+++|+|++|..||...........+...
T Consensus       137 ~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~  214 (260)
T PF00069_consen  137 VKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQ--QGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKI  214 (260)
T ss_dssp             EEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHT--TTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccchhhhhhhhhc
Confidence            99999999876433333444567899999999984  2566889999999999999999999999887433333322221


Q ss_pred             CCCC--CCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         154 GFKP--PALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       154 ~~~~--~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....  ............+.++|.+||..||++||++.++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  215 LKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             ccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1000  000011112479999999999999999999999999

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.97  E-value=2.3e-31  Score=227.25  Aligned_cols=184  Identities=15%  Similarity=0.141  Sum_probs=148.3

Q ss_pred             Cchhhhcc---hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHF---LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~---~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      |+++++.+   ..++||||+++|+|. .++....   .+++..+..++.|++.||+|||++||+||||||    ++.++.
T Consensus        58 i~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~  133 (257)
T cd05116          58 IVRMIGICEAESWMLVMELAELGPLN-KFLQKNK---HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHY  133 (257)
T ss_pred             cceEEEEEcCCCcEEEEecCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCe
Confidence            34555433   248999999999999 7777665   799999999999999999999999999999999    778899


Q ss_pred             EEEecccccccccccccc---ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          74 VKLADFGVSAQITATINK---RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      +||+|||++.........   .....++..|+|||.+.   ...++.++|+|||||++|+|++ |..||...........
T Consensus       134 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~  210 (257)
T cd05116         134 AKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMN---YYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQM  210 (257)
T ss_pred             EEECCCccccccCCCCCeeeecCCCCCCccccCHhHhc---cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            999999999776543221   11223457899999985   5568889999999999999998 9999988777766666


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      +..... ++   .+..++.++.++|.+||+.||++||++.++.+.|
T Consensus       211 i~~~~~-~~---~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l  252 (257)
T cd05116         211 IESGER-ME---CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRL  252 (257)
T ss_pred             HHCCCC-CC---CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHH
Confidence            654332 11   2456789999999999999999999999998744

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.97  E-value=1.4e-31  Score=231.35  Aligned_cols=178  Identities=24%  Similarity=0.238  Sum_probs=138.0

Q ss_pred             chheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccc
Q psy3574           8 FLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSA   83 (302)
Q Consensus         8 ~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~   83 (302)
                      ...|+||||+++ +|.+.+.....   .+++..++.++.|++.||+|||++|++||||+|    ++. +.+||+|||++.
T Consensus        73 ~~~~lv~e~~~~-~l~~~l~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~  147 (282)
T cd07831          73 GRLALVFELMDM-NLYELIKGRKR---PLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCR  147 (282)
T ss_pred             CcEEEEEecCCc-cHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEeccccc
Confidence            346899999986 77734433334   689999999999999999999999999999999    666 999999999998


Q ss_pred             ccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC----
Q psy3574          84 QITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPA----  159 (302)
Q Consensus        84 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~----  159 (302)
                      ...... ......++..|+|||.+.  ....++.++|+||+||++|+|++|..||.+.+..+....+......++.    
T Consensus       148 ~~~~~~-~~~~~~~~~~y~aPE~~~--~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (282)
T cd07831         148 GIYSKP-PYTEYISTRWYRAPECLL--TDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLK  224 (282)
T ss_pred             ccccCC-CcCCCCCCcccCChhHhh--cCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence            765432 223456789999999874  2344688999999999999999999999887766554444321111000    


Q ss_pred             ---------C-----------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         160 ---------L-----------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       160 ---------~-----------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                               .           .....++..+.++|.+||..+|++||++.++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         225 KFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             hhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence                     0           001246889999999999999999999999999

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.97  E-value=2.1e-31  Score=230.66  Aligned_cols=188  Identities=16%  Similarity=0.194  Sum_probs=144.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+.+ +|. .++.... +..+++..+..++.|++.||+|||+.|++||||+|    ++.++
T Consensus        61 i~~~~~~~~~~~~~~~v~e~~~~-~l~-~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~  137 (284)
T cd07860          61 IVKLLDVIHTENKLYLVFEFLHQ-DLK-KFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG  137 (284)
T ss_pred             CcchhhhcccCCcEEEEeecccc-CHH-HHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence            456666555    5899999964 888 5554422 12688999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............++..|+|||++.  ....++.++|+|||||++|+|++|+.||...........+..
T Consensus       138 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~  215 (284)
T cd07860         138 AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL--GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR  215 (284)
T ss_pred             CEEEeeccchhhcccCccccccccccccccCCeEEe--cCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            999999999876654333333445788999999885  233467899999999999999999999987766554444333


Q ss_pred             cCCCCCC------------------C------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPA------------------L------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~------------------~------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....++.                  .      .....++..++++|.+||+.||.+|||+.++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         216 TLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            2111100                  0      011346788999999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=1.8e-31  Score=231.45  Aligned_cols=189  Identities=23%  Similarity=0.327  Sum_probs=145.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh-CCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK-SGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~i~Hrdlkp----~~~~   71 (302)
                      |+++++.+.    .|+||||++|++|. .++........+++..+..++.|++.||.|||+ .||+||||+|    ++.+
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~  139 (286)
T cd06622          61 IVDFYGAFFIEGAVYMCMEYMDAGSLD-KLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGN  139 (286)
T ss_pred             HHhhhhheecCCeEEEEEeecCCCCHH-HHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCC
Confidence            456676554    58999999999998 777764212268999999999999999999997 5999999999    7778


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVER---KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF  148 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  148 (302)
                      +.+||+|||.+......  ......++..|+|||.+.+..   ...++.++|+||+||++|+|++|+.||..........
T Consensus       140 ~~~~l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~  217 (286)
T cd06622         140 GQVKLCDFGVSGNLVAS--LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFA  217 (286)
T ss_pred             CCEEEeecCCcccccCC--ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHH
Confidence            99999999998766432  223446888999999985211   1235789999999999999999999997655443333


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+...... .....+..++.++.+||.+||+.+|.+||++.++++
T Consensus       218 ~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         218 QLSAIVDG-DPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             HHHHHhhc-CCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            22221111 111223458999999999999999999999999999

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.97  E-value=9.4e-32  Score=227.16  Aligned_cols=174  Identities=16%  Similarity=0.165  Sum_probs=138.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||++||+|. +++....   .+++..+..++.|++.||+|||++|++||||||    ++.++
T Consensus        47 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~  122 (237)
T cd05576          47 MVCLHKYIVSEDSVFLVLQHAEGGKLW-SHISKFL---NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRG  122 (237)
T ss_pred             eeehhhheecCCeEEEEEecCCCCCHH-HHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC
Confidence            356666554    58999999999999 7766655   699999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .++|+|||.+......   .....++..|+|||.+.   ...++.++|+||+||++|+|++|..|+.......      .
T Consensus       123 ~~~l~df~~~~~~~~~---~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------~  190 (237)
T cd05576         123 HIQLTYFSRWSEVEDS---CDGEAVENMYCAPEVGG---ISEETEACDWWSLGAILFELLTGKTLVECHPSGI------N  190 (237)
T ss_pred             CEEEecccchhccccc---cccCCcCccccCCcccC---CCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------c
Confidence            9999999987655432   22334677899999985   5667899999999999999999998875432110      0


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH-----HHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA-----DKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~-----~~ll~  193 (302)
                         .......+..++..+.++|.+||+.||.+|+++     +++++
T Consensus       191 ---~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~  233 (237)
T cd05576         191 ---THTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKS  233 (237)
T ss_pred             ---cccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHc
Confidence               001112345678999999999999999999986     77777

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.97  E-value=2e-31  Score=227.35  Aligned_cols=183  Identities=21%  Similarity=0.376  Sum_probs=149.4

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.+.    .|+|+||+.+++|. +.+.... ...+++.++..++.|++.||.|||++|++|+||+|    ++.++.
T Consensus        62 ~~~~~~~~~~~~~~lv~e~~~~~~l~-~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~  139 (256)
T cd08218          62 VQYQESFEENGNLYIVMDYCEGGDLY-KKINAQR-GVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT  139 (256)
T ss_pred             eeeEeeecCCCeEEEEEecCCCCcHH-HHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC
Confidence            45555544    58999999999999 6665432 12578899999999999999999999999999999    778899


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      ++|+|||.+..............|+..|+|||++.   +..++.++|+||+||++|+|++|+.||...........+...
T Consensus       140 ~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~  216 (256)
T cd08218         140 IKLGDFGIARVLNSTVELARTCIGTPYYLSPEICE---NRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRG  216 (256)
T ss_pred             EEEeeccceeecCcchhhhhhccCCccccCHHHhC---CCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcC
Confidence            99999999876654333333456888999999985   556788999999999999999999999887777766666554


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       154 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....    .+..++..+.++|.+||+.+|.+||++.++++
T Consensus       217 ~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         217 SYPP----VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             CCCC----CcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            3221    23567899999999999999999999999999

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.97  E-value=1.7e-31  Score=231.32  Aligned_cols=187  Identities=21%  Similarity=0.239  Sum_probs=144.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+|+||+ +++|. .++....  .++++.+++.++.||+.||+|||++|++|+||+|    ++.++
T Consensus        61 i~~~~~~~~~~~~~~~v~e~~-~~~L~-~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~  136 (286)
T cd07832          61 VVKLLDVFPHGSGFVLVMEYM-PSDLS-EVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADG  136 (286)
T ss_pred             CcceeeEEecCCeeEEEeccc-CCCHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCC
Confidence            455665444    58999999 99999 6665432  2799999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      .++|+|||.+........ ......++..|+|||.+.  ....++.++||||+||++|+|++|.+||.+.........+.
T Consensus       137 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~  214 (286)
T cd07832         137 VLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLY--GARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVF  214 (286)
T ss_pred             cEEEeeeeecccccCCCCCccccccCcccccCceeee--ccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHH
Confidence            999999999887654321 123456889999999985  23446899999999999999999988887776655554443


Q ss_pred             hcCCCCC-------------------C------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPP-------------------A------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~-------------------~------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....+.                   .      .......+..+.++|.+||..+|.+||+++++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         215 RTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             HHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            3111100                   0      0011245789999999999999999999999999

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.97  E-value=1e-31  Score=241.70  Aligned_cols=155  Identities=21%  Similarity=0.288  Sum_probs=122.9

Q ss_pred             cccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccccccccc--ccccccCcccchhhccc
Q psy3574          35 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAA  108 (302)
Q Consensus        35 ~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~  108 (302)
                      ++++..+..++.||+.||.|||++||+||||||    ++.++.+||+|||+++........  .....++..|||||++.
T Consensus       208 ~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~  287 (374)
T cd05106         208 PLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIF  287 (374)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhc
Confidence            467778899999999999999999999999999    778899999999998765432211  11223456799999985


Q ss_pred             ccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC
Q psy3574         109 VERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT  187 (302)
Q Consensus       109 ~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t  187 (302)
                         ...++.++|||||||++|+|++ |+.||....................   .+..++.++.+++.+||+.||.+||+
T Consensus       288 ---~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~RPs  361 (374)
T cd05106         288 ---DCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMS---RPDFAPPEIYSIMKMCWNLEPTERPT  361 (374)
T ss_pred             ---CCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCcc---CCCCCCHHHHHHHHHHcCCChhhCcC
Confidence               5668999999999999999997 9999987655444444444332222   23456899999999999999999999


Q ss_pred             HHHHHHHH
Q psy3574         188 ADKLLQVI  195 (302)
Q Consensus       188 ~~~ll~~l  195 (302)
                      +.++++.+
T Consensus       362 ~~~l~~~l  369 (374)
T cd05106         362 FSQISQLI  369 (374)
T ss_pred             HHHHHHHH
Confidence            99998843

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.97  E-value=2.7e-31  Score=227.10  Aligned_cols=185  Identities=25%  Similarity=0.393  Sum_probs=150.3

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhc-cccccccccchhHHHhhHHHHHHHHH-----hCCCCCCCCcC-
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMS-----KSGFKPPALKD-   67 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH-----~~~i~Hrdlkp-   67 (302)
                      |+++++.+.      .|++|||+++++|. .++... ....++++..++.++.||+.||+|||     +.+++|+||+| 
T Consensus        61 i~~~~~~~~~~~~~~~~~~~e~~~~~~L~-~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~  139 (265)
T cd08217          61 IVRYYDRIIDRSNQTLYIVMEYCEGGDLA-QLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPA  139 (265)
T ss_pred             cceeeeeeecCCCCEEEEEehhccCCCHH-HHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHH
Confidence            456666443      48999999999999 666542 11237899999999999999999999     99999999999 


Q ss_pred             ---CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH
Q psy3574          68 ---KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM  144 (302)
Q Consensus        68 ---~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  144 (302)
                         ++.++.+||+|||.+..............++..|+|||.+.   ...++.++|+||||+++|+|++|..||...+..
T Consensus       140 nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~---~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~  216 (265)
T cd08217         140 NIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLN---HMSYDEKSDIWSLGCLIYELCALSPPFTARNQL  216 (265)
T ss_pred             HEEEecCCCEEEecccccccccCCcccccccccCCCccChhhhc---CCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH
Confidence               88889999999999987765433244557899999999985   555789999999999999999999999887755


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         145 RALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       145 ~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....+.....    ...+..++..+.+++.+||..+|.+||++.++++
T Consensus       217 ~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         217 QLASKIKEGKF----RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             HHHHHHhcCCC----CCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            54444443321    1234567899999999999999999999999999

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.97  E-value=2.6e-31  Score=231.38  Aligned_cols=182  Identities=33%  Similarity=0.596  Sum_probs=147.0

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      |++++.|.    .|+||||+++++|. +++...    .+++..++.++.|++.||+|||++|++|+||+|    ++.++.
T Consensus        80 v~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~  154 (292)
T cd06657          80 VEMYNSYLVGDELWVVMEFLEGGALT-DIVTHT----RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGR  154 (292)
T ss_pred             hheeeEEEeCCEEEEEEecCCCCcHH-HHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC
Confidence            45555443    58999999999998 666543    488999999999999999999999999999999    888899


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      ++|+|||++..............|+..|+|||.+.   ...++.++|+||+|+++|+|++|..||.+.........+...
T Consensus       155 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~---~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~  231 (292)
T cd06657         155 VKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELIS---RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN  231 (292)
T ss_pred             EEEcccccceecccccccccccccCccccCHHHhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhh
Confidence            99999999876654333334456889999999985   455788999999999999999999999877666555444332


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       154 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .  ++.......++..+.+++.+||..+|.+||++.+++.
T Consensus       232 ~--~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         232 L--PPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             C--CcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence            1  2222233557889999999999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.97  E-value=1.9e-31  Score=232.64  Aligned_cols=187  Identities=22%  Similarity=0.193  Sum_probs=145.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+ +|+|. .++....  ..+++..+..++.||+.||.|||++|++|+||+|    ++.++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~-~~~L~-~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~  139 (298)
T cd07841          64 IIGLLDVFGHKSNINLVFEFM-ETDLE-KVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDG  139 (298)
T ss_pred             ChhhhheeecCCEEEEEEccc-CCCHH-HHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCC
Confidence            456666555    48999999 88999 7776542  2689999999999999999999999999999999    78899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............++..|+|||.+.  ....++.++|+||+||++|+|++|.+||.+.........+..
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~  217 (298)
T cd07841         140 VLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLF--GARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFE  217 (298)
T ss_pred             CEEEccceeeeeccCCCccccccccceeeeCHHHHh--CCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHH
Confidence            999999999987655433333345678899999885  234578999999999999999999888877666555544432


Q ss_pred             cCCCCC-----------------------CCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPP-----------------------ALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~-----------------------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+.                       ........+..+.++|.+||..+|++|||+.++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~  281 (298)
T cd07841         218 ALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE  281 (298)
T ss_pred             HcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            211000                       00011345788999999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.97  E-value=3.4e-31  Score=230.08  Aligned_cols=187  Identities=13%  Similarity=0.202  Sum_probs=148.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc----------ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCc
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI----------TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK   66 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~----------~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlk   66 (302)
                      |+++++.+.    .|+||||+++|+|. +++....          ....+++..+..++.|++.||+|||++|++|||||
T Consensus        69 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlk  147 (288)
T cd05093          69 IVKFYGVCVEGDPLIMVFEYMKHGDLN-KFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLA  147 (288)
T ss_pred             cceEEEEEecCCccEEEEEcCCCCCHH-HHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccC
Confidence            456666554    69999999999999 6665432          11248899999999999999999999999999999


Q ss_pred             C----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q psy3574          67 D----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMF  139 (302)
Q Consensus        67 p----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~  139 (302)
                      |    ++.++.+||+|||++........  ......++..|+|||++.   ...++.++|+|||||++|+|++ |..||.
T Consensus       148 p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~sDiwslG~il~~l~t~g~~p~~  224 (288)
T cd05093         148 TRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM---YRKFTTESDVWSLGVVLWEIFTYGKQPWY  224 (288)
T ss_pred             cceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            9    78899999999999876543211  112234567899999985   5668899999999999999998 999998


Q ss_pred             CCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         140 DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       140 ~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ..........+.......    .+..++..+.+++.+||+.||.+|||+.+++..+
T Consensus       225 ~~~~~~~~~~i~~~~~~~----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l  276 (288)
T cd05093         225 QLSNNEVIECITQGRVLQ----RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLL  276 (288)
T ss_pred             CCCHHHHHHHHHcCCcCC----CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence            877776666665543221    2345788999999999999999999999997744

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.97  E-value=3.9e-31  Score=228.46  Aligned_cols=186  Identities=14%  Similarity=0.184  Sum_probs=148.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-----------cccccccchhHHHhhHHHHHHHHHhCCCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-----------AIELAELQPPMFDLHPMRALFLMSKSGFKPPAL   65 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdl   65 (302)
                      |+++++.+.    .|+||||++||+|. +++...+.           ...+++..+..++.|++.||.|||++|++||||
T Consensus        70 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dl  148 (280)
T cd05049          70 IVKFYGVCTEGDPPIMVFEYMEHGDLN-KFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDL  148 (280)
T ss_pred             chheeeEEecCCCeEEEEecCCCCCHH-HHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecccc
Confidence            355665554    58999999999999 77765421           124788899999999999999999999999999


Q ss_pred             cC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCC
Q psy3574          66 KD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPM  138 (302)
Q Consensus        66 kp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf  138 (302)
                      +|    ++.++.+||+|||++........  ......++..|+|||++.   ...++.++|||||||++|+|++ |..||
T Consensus       149 kp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~e~~~~g~~p~  225 (280)
T cd05049         149 ATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIM---YRKFTTESDVWSFGVVLWEIFTYGKQPW  225 (280)
T ss_pred             ccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhc---cCCcchhhhHHHHHHHHHHHHhcCCCCC
Confidence            99    88889999999999875433211  112334577899999985   6668999999999999999998 99999


Q ss_pred             CCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         139 FDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       139 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      .+.........+.......+    +..++..+.+++.+||..||++||++.++++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  277 (280)
T cd05049         226 YGLSNEEVIECITQGRLLQR----PRTCPSEVYDIMLGCWKRDPQQRINIKDIHER  277 (280)
T ss_pred             CCCCHHHHHHHHHcCCcCCC----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            88877776666654332222    35678999999999999999999999999884

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.97  E-value=2.8e-31  Score=228.08  Aligned_cols=186  Identities=25%  Similarity=0.376  Sum_probs=141.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccc--cccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIEL--AELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l--~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      ||++++.+.    .|+|+||+.+++|. .++....  ..+  ++..+..++.||+.||+|||++||+||||+|    ++.
T Consensus        67 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~  143 (268)
T cd06624          67 IVQYLGSDSENGFFKIFMEQVPGGSLS-ALLRSKW--GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT  143 (268)
T ss_pred             eeeeeeeeccCCEEEEEEecCCCCCHH-HHHHHhc--ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC
Confidence            456666544    58999999999999 6665432  145  7888899999999999999999999999999    443


Q ss_pred             -CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HH
Q psy3574          71 -CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRA-LF  148 (302)
Q Consensus        71 -~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~  148 (302)
                       .+.+||+|||.+..............|+..|+|||.+... ...++.++|+||+|+++|+|++|..||........ ..
T Consensus       144 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~  222 (268)
T cd06624         144 YSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKG-PRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMF  222 (268)
T ss_pred             CCCeEEEecchhheecccCCCccccCCCCccccChhhhccc-cccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHh
Confidence             6799999999987654332233344688999999998521 23478899999999999999999999976443222 11


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+...... +  ..+..++.++.+|+.+||..+|.+|||+.+++.
T Consensus       223 ~~~~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         223 KVGMFKIH-P--EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             hhhhhccC-C--CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            11111111 1  224567889999999999999999999999999

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.97  E-value=5.1e-31  Score=225.61  Aligned_cols=188  Identities=27%  Similarity=0.426  Sum_probs=146.8

Q ss_pred             Cchhhhcc----hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHF----LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~----~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+    ..++|+||+++++|. +++..+.   .+++..++.++.|++.||.|||+.|++|+||+|    ++.++
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~  136 (264)
T cd06626          61 LVKYYGVEVHREKVYIFMEYCSGGTLE-ELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNG  136 (264)
T ss_pred             hhheeeeEecCCEEEEEEecCCCCcHH-HHHhhcC---CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            34555543    368999999999999 7887765   689999999999999999999999999999999    77899


Q ss_pred             CEEEeccccccccccccccc----cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKR----KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF  148 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  148 (302)
                      .+||+|||++..........    ....++..|+|||.+.+.....++.++|+||+|+++|+|++|+.||..........
T Consensus       137 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~  216 (264)
T cd06626         137 VIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIM  216 (264)
T ss_pred             CEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHH
Confidence            99999999988765432221    13467889999999863222337899999999999999999999997654333222


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...... ..+..+....++..+.++|.+||+.+|.+||++.+++.
T Consensus       217 ~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         217 FHVGAG-HKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HHHhcC-CCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            222222 22233333445899999999999999999999999999

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.97  E-value=4e-31  Score=225.22  Aligned_cols=182  Identities=25%  Similarity=0.376  Sum_probs=146.9

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC-CCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD-RCG   72 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~-~~~   72 (302)
                      +++++.+.    .|+||||++|++|. +++.... +..+++..+..++.|++.||+|||++|++|+||+|    ++ .++
T Consensus        62 ~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~  139 (256)
T cd08220          62 IEYYENFLEDKALMIVMEYAPGGTLA-EYIQKRC-NSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKM  139 (256)
T ss_pred             hheeeeEecCCEEEEEEecCCCCCHH-HHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC
Confidence            45555443    58999999999999 6665532 22588999999999999999999999999999999    44 455


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||.+...... .......++..|+|||.+.   +..++.++|+||+|+++|+|++|..||...+.......+..
T Consensus       140 ~~~l~d~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~  215 (256)
T cd08220         140 VVKIGDFGISKILSSK-SKAYTVVGTPCYISPELCE---GKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS  215 (256)
T ss_pred             EEEEccCCCceecCCC-ccccccccCCcccCchhcc---CCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHh
Confidence            6899999999876543 2223456888999999985   55678899999999999999999999988777666655554


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....    .+..++..+.+++.+||..+|.+|||+.++++
T Consensus       216 ~~~~~----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         216 GTFAP----ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             cCCCC----CCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            33221    23557899999999999999999999999999

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.97  E-value=4.7e-31  Score=224.99  Aligned_cols=182  Identities=30%  Similarity=0.435  Sum_probs=148.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+|+||+++++|. .++....   .+++..+..++.||+.||+|||+.|++|+||+|    ++.++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~  139 (258)
T cd06632          64 IVQYLGTEREEDNLYIFLELVPGGSLA-KLLKKYG---SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNG  139 (258)
T ss_pred             chheeeeEecCCeEEEEEEecCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            456666554    58999999999999 7777665   689999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKG-GYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      .+||+|||.+....... ......++..|++||.+.   .. .++.++|+||+||++|+|++|+.||...........+.
T Consensus       140 ~~kl~d~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~---~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~  215 (258)
T cd06632         140 VVKLADFGMAKQVVEFS-FAKSFKGSPYWMAPEVIA---QQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIG  215 (258)
T ss_pred             CEEEccCccceeccccc-cccccCCCcceeCHHHhc---CCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHH
Confidence            99999999987665432 233456889999999985   33 37899999999999999999999997766555444443


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ... ..  ...+..++..+.+++.+||..+|.+||++.+++.
T Consensus       216 ~~~-~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         216 RSK-EL--PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             hcc-cC--CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            322 11  1234567899999999999999999999999999

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0665|consensus

Probab=99.97  E-value=3.4e-32  Score=226.28  Aligned_cols=173  Identities=20%  Similarity=0.223  Sum_probs=142.9

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+.. +|. ..+..     .+.-..++.+++|++.|++|||+.||+||||||    +..++.+||+|||+|+..
T Consensus        96 ~y~v~e~m~~-nl~-~vi~~-----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e  168 (369)
T KOG0665|consen   96 VYLVMELMDA-NLC-QVILM-----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTE  168 (369)
T ss_pred             HHHHHHhhhh-HHH-HHHHH-----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhccc
Confidence            5899999977 998 55552     478899999999999999999999999999999    889999999999999876


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC------
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPA------  159 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~------  159 (302)
                      ... -..+.++.++.|.|||++.   +.+|...+||||+||++.||++|+..|.+.+..+...++......+..      
T Consensus       169 ~~~-~~mtpyVvtRyyrapevil---~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL  244 (369)
T KOG0665|consen  169 DTD-FMMTPYVVTRYYRAPEVIL---GMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL  244 (369)
T ss_pred             Ccc-cccCchhheeeccCchhee---ccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence            554 3556788999999999997   666999999999999999999999999988777776666552211110      


Q ss_pred             -------------------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         160 -------------------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       160 -------------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                                     ......-...+++++.+||..||++|.+++++|.
T Consensus       245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~  309 (369)
T KOG0665|consen  245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR  309 (369)
T ss_pred             hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence                                           0001112456899999999999999999999999

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.97  E-value=1.9e-31  Score=236.81  Aligned_cols=186  Identities=18%  Similarity=0.200  Sum_probs=144.8

Q ss_pred             Cchhhhcch---------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----
Q psy3574           1 MSRVFNHFL---------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----   67 (302)
Q Consensus         1 iv~~~~~~~---------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----   67 (302)
                      |+++++.+.         .|+|+||+. ++|. .++...+   .+++..+..++.|++.||.|||++|++||||+|    
T Consensus        66 i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~-~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil  140 (337)
T cd07858          66 VIAIKDIMPPPHREAFNDVYIVYELMD-TDLH-QIIRSSQ---TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLL  140 (337)
T ss_pred             ccchHHheecccccccCcEEEEEeCCC-CCHH-HHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEE
Confidence            456666442         589999997 4888 7777666   799999999999999999999999999999999    


Q ss_pred             CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy3574          68 KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRAL  147 (302)
Q Consensus        68 ~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  147 (302)
                      ++.++.+||+|||++..............++..|+|||.+.  ....++.++|+|||||++|+|++|++||.+.+.....
T Consensus       141 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~  218 (337)
T cd07858         141 LNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLL--NCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQL  218 (337)
T ss_pred             EcCCCCEEECcCccccccCCCcccccccccccCccChHHHh--cCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHH
Confidence            77889999999999987654323334456888999999985  2345789999999999999999999999766543333


Q ss_pred             HHHHhcCCC--------------------------CCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         148 FLMSKSGFK--------------------------PPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~--------------------------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+......                          .........+++.+.++|.+||+.+|++|||+.++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~  290 (337)
T cd07858         219 KLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALA  290 (337)
T ss_pred             HHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHc
Confidence            222211000                          0000112457899999999999999999999999999

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.97  E-value=4.8e-31  Score=225.03  Aligned_cols=186  Identities=19%  Similarity=0.239  Sum_probs=150.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc------cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT------AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---   67 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---   67 (302)
                      |+++++.+.    +++||||+++++|. +++.....      ...+++..++.++.|++.||+|||++|++||||+|   
T Consensus        58 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~ni  136 (262)
T cd00192          58 VVRLLGVCTEEEPLYLVLEYMEGGDLL-DYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNC  136 (262)
T ss_pred             hheeeeeecCCCceEEEEEeccCCcHH-HHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceE
Confidence            355555544    58999999999999 77766410      12799999999999999999999999999999999   


Q ss_pred             -CCCCCCEEEecccccccccccc--ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCh
Q psy3574          68 -KDRCGDVKLADFGVSAQITATI--NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHP  143 (302)
Q Consensus        68 -~~~~~~ikL~DFg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~  143 (302)
                       ++.++.+||+|||.+.......  .......++..|+|||.+.   ...++.++|+|||||++|+|++ |..||.....
T Consensus       137 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~  213 (262)
T cd00192         137 LVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLK---DGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN  213 (262)
T ss_pred             EECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhc---cCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH
Confidence             8888999999999998765432  1223345788999999985   4568899999999999999999 6999988877


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         144 MRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       144 ~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      ......+....    ....+..++.++.+++.+||..+|.+||++.+++++
T Consensus       214 ~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         214 EEVLEYLRKGY----RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             HHHHHHHHcCC----CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            76666655422    122345678999999999999999999999999883

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.97  E-value=1.2e-31  Score=233.63  Aligned_cols=183  Identities=34%  Similarity=0.589  Sum_probs=147.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+|+||+++++|. .++...    .+++..+..++.|++.||+|||++|++|||++|    ++.++
T Consensus        78 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~  152 (293)
T cd06647          78 IVNYLDSYLVGDELWVVMEYLAGGSLT-DVVTET----CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG  152 (293)
T ss_pred             eeehhheeeeCCcEEEEEecCCCCcHH-HHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCC
Confidence            355665543    68999999999999 777654    488899999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............+++.|+|||.+.   ...++.++|+||+||++|++++|+.||...+.......+..
T Consensus       153 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~  229 (293)
T cd06647         153 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT---RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT  229 (293)
T ss_pred             CEEEccCcceecccccccccccccCChhhcCchhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc
Confidence            999999998876654433334456888999999985   55678999999999999999999999987665544333322


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..  .+....+..++..+.++|.+||..+|++||++.+++.
T Consensus       230 ~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  268 (293)
T cd06647         230 NG--TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  268 (293)
T ss_pred             CC--CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            21  2222334557889999999999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.97  E-value=4e-31  Score=227.07  Aligned_cols=184  Identities=14%  Similarity=0.134  Sum_probs=147.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++|+|. +++....  ..+++..++.++.||+.||+|||++|++||||||    ++.++
T Consensus        68 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~  144 (266)
T cd05064          68 IVRLEGVITRGNTMMIVTEYMSNGALD-SFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDL  144 (266)
T ss_pred             cCeEEEEEecCCCcEEEEEeCCCCcHH-HHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCC
Confidence            466666544    58999999999999 7666532  1689999999999999999999999999999999    88889


Q ss_pred             CEEEecccccccccccccc-ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINK-RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      .+|++|||.+......... .....++..|+|||.+.   ...++.++||||+||++|++++ |..||.+.........+
T Consensus       145 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~  221 (266)
T cd05064         145 VCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQ---YHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAV  221 (266)
T ss_pred             cEEECCCcccccccccchhcccCCCCceeecCHHHHh---hCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH
Confidence            9999999987654322111 11223467899999985   5678999999999999999775 99999988877766665


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      ..... .+   .+..++..+.+++.+||+.+|.+||+++++++.
T Consensus       222 ~~~~~-~~---~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~  261 (266)
T cd05064         222 EDGFR-LP---APRNCPNLLHQLMLDCWQKERGERPRFSQIHSI  261 (266)
T ss_pred             HCCCC-CC---CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHH
Confidence            54322 22   245678999999999999999999999999884

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.97  E-value=6.6e-31  Score=228.28  Aligned_cols=187  Identities=17%  Similarity=0.248  Sum_probs=143.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-------cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC--
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-------AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD--   67 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp--   67 (302)
                      |+++++.+.    .|+||||+.+|+|. +++.....       ...++...+..++.|++.||.|||++||+||||||  
T Consensus        71 i~~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~n  149 (288)
T cd05061          71 VVRLLGVVSKGQPTLVVMELMAHGDLK-SYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARN  149 (288)
T ss_pred             eeeEEEEEcCCCCcEEEEeCCCCCCHH-HHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChhe
Confidence            345555444    58999999999999 67654321       01234557788999999999999999999999999  


Q ss_pred             --CCCCCCEEEecccccccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q psy3574          68 --KDRCGDVKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLH  142 (302)
Q Consensus        68 --~~~~~~ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~  142 (302)
                        ++.++.+||+|||+++........  .....++..|+|||.+.   ...++.++|+|||||++|+|++ |..||.+..
T Consensus       150 ili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~---~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~  226 (288)
T cd05061         150 CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLK---DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS  226 (288)
T ss_pred             EEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhc---cCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence              778899999999998765432111  11224567899999985   5668899999999999999998 789998877


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         143 PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       143 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ..+....+......    ..+..++..+.+++.+||+.+|++||++.++++.+
T Consensus       227 ~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l  275 (288)
T cd05061         227 NEQVLKFVMDGGYL----DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL  275 (288)
T ss_pred             HHHHHHHHHcCCCC----CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            66655555443221    12345678999999999999999999999998843

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.97  E-value=1.6e-31  Score=231.09  Aligned_cols=177  Identities=25%  Similarity=0.428  Sum_probs=139.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .++||||+++|+|. .+    .   .+++..+..++.|++.||.|||+.||+|+||+|    ++.++
T Consensus        61 iv~~~~~~~~~~~~~lv~e~~~~~~l~-~~----~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~  132 (279)
T cd06619          61 IIGFYGAFFVENRISICTEFMDGGSLD-VY----R---KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRG  132 (279)
T ss_pred             eeeEEEEEEECCEEEEEEecCCCCChH-Hh----h---cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCC
Confidence            456666655    58999999999986 33    2   477888999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-------H
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM-------R  145 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~  145 (302)
                      .+||+|||++......  .....+|+..|+|||++.   +..++.++|+||+||++|+|++|+.||......       .
T Consensus       133 ~~~l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~  207 (279)
T cd06619         133 QVKLCDFGVSTQLVNS--IAKTYVGTNAYMAPERIS---GEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQ  207 (279)
T ss_pred             CEEEeeCCcceecccc--cccCCCCChhhcCceeec---CCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHH
Confidence            9999999998766432  233457899999999996   556889999999999999999999999643211       1


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+...  ..+.. ....++.++.+++.+||..+|++||+++++++
T Consensus       208 ~~~~~~~~--~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~  252 (279)
T cd06619         208 LLQCIVDE--DPPVL-PVGQFSEKFVHFITQCMRKQPKERPAPENLMD  252 (279)
T ss_pred             HHHHHhcc--CCCCC-CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            11122111  11111 12446889999999999999999999999999

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.97  E-value=3.9e-31  Score=226.82  Aligned_cols=173  Identities=29%  Similarity=0.470  Sum_probs=141.1

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||++|++|. +++....   .+++..+..++.|++.||+|||++|++|+||+|    ++.++.+||+|||.+...
T Consensus        81 ~~~v~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~  156 (265)
T cd06652          81 LSIFMEHMPGGSIK-DQLKSYG---ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRL  156 (265)
T ss_pred             EEEEEEecCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence            57999999999999 7777655   688999999999999999999999999999999    888899999999998765


Q ss_pred             cccc---ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCC
Q psy3574          86 TATI---NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD  162 (302)
Q Consensus        86 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  162 (302)
                      ....   .......|+..|+|||.+.   +..++.++|+|||||++|+|++|+.||...........+....   .....
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---~~~~~  230 (265)
T cd06652         157 QTICLSGTGMKSVTGTPYWMSPEVIS---GEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQP---TNPVL  230 (265)
T ss_pred             ccccccccccccCCCCccccChhhhc---CCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCC---CCCCC
Confidence            4311   1123346888999999986   4567899999999999999999999998766555544433221   11223


Q ss_pred             CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         163 KDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       163 ~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +..++..+.++|.+|+. +|++||+++++++
T Consensus       231 ~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         231 PPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             chhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence            45678899999999995 8999999999999

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.97  E-value=2e-31  Score=228.38  Aligned_cols=181  Identities=27%  Similarity=0.474  Sum_probs=144.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhc-cccccccccchhHHHhhHHHHHHHHHh-CCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSK-SGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~i~Hrdlkp----~~~   70 (302)
                      |+++++.+.    .|+|+||+.+++|. +++... .   .+++..+..++.|++.||+|||+ .|++|+||+|    ++.
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~  136 (265)
T cd06605          61 IVGFYGAFYNNGDISICMEYMDGGSLD-KILKEVQG---RIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS  136 (265)
T ss_pred             hhhhheeeecCCEEEEEEEecCCCcHH-HHHHHccC---CCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC
Confidence            345555544    58999999999999 777665 4   79999999999999999999999 9999999999    788


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----hHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH-----PMR  145 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~  145 (302)
                      ++.++|+|||.+.........  ...++..|+|||.+.   +..++.++|+||+||++|+|++|..||....     ...
T Consensus       137 ~~~~~l~d~g~~~~~~~~~~~--~~~~~~~y~~PE~~~---~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~  211 (265)
T cd06605         137 RGQIKLCDFGVSGQLVNSLAK--TFVGTSSYMAPERIQ---GNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFE  211 (265)
T ss_pred             CCCEEEeecccchhhHHHHhh--cccCChhccCHHHHc---CCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHH
Confidence            999999999998766543222  267888999999986   5578899999999999999999999997542     222


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+...  ..+... ...++.++.++|.+||..+|++|||+.+++.
T Consensus       212 ~~~~~~~~--~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         212 LLQYIVNE--PPPRLP-SGKFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             HHHHHhcC--CCCCCC-hhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            22222222  111111 1227889999999999999999999999999

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG0586|consensus

Probab=99.97  E-value=3e-32  Score=243.93  Aligned_cols=186  Identities=20%  Similarity=0.242  Sum_probs=161.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |||.|....    +|+||||+.+|.++ +++...+   .+.+..++.++.|+++|++|||+++|+|||||.    ++.+.
T Consensus       117 Ivkl~~v~~t~~~lylV~eya~~ge~~-~yl~~~g---r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~m  192 (596)
T KOG0586|consen  117 IVKLFSVIETEATLYLVMEYASGGELF-DYLVKHG---RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENM  192 (596)
T ss_pred             eeeeeeeeeecceeEEEEEeccCchhH-HHHHhcc---cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccccc
Confidence            567776544    69999999999999 8888877   788999999999999999999999999999999    88888


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      ++||+|||++..+... ....++||++.|.|||+..   +..| ++.+|+||+|+++|.|++|.+||.+.+-.+......
T Consensus       193 nikIaDfgfS~~~~~~-~~lqt~cgsppyAaPEl~~---g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl  268 (596)
T KOG0586|consen  193 NIKIADFGFSTFFDYG-LMLQTFCGSPPYAAPELFN---GKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVL  268 (596)
T ss_pred             ceeeeccccceeeccc-ccccccCCCCCccChHhhc---CcccCCcceehhhhhhhheeeeecccccCCcccccccchhe
Confidence            9999999999888754 5667889999999999997   4334 689999999999999999999999988777776666


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHh
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHR  199 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~  199 (302)
                      ...+..+     ..++.++.++|+++|.++|.+|+++++++.+-|...
T Consensus       269 ~gk~rIp-----~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~  311 (596)
T KOG0586|consen  269 RGKYRIP-----FYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRND  311 (596)
T ss_pred             eeeeccc-----ceeechhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence            6655544     457889999999999999999999999999555433

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.97  E-value=2.9e-31  Score=226.26  Aligned_cols=183  Identities=21%  Similarity=0.340  Sum_probs=149.3

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.+.    .|+||||+++|+|. .++.... +..+++..+..++.|++.||.|||++|++|+||+|    ++.++.
T Consensus        61 ~~~~~~~~~~~~~~lv~e~~~~~~l~-~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~  138 (255)
T cd08219          61 VAFKESFEADGHLYIVMEYCDGGDLM-QKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGK  138 (255)
T ss_pred             ceEEEEEEECCEEEEEEeeCCCCcHH-HHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCc
Confidence            44555444    58999999999999 6554422 12588999999999999999999999999999999    788899


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      ++|+|||.+..............|+..|+|||++.   ...++.++|+||+|+++|+|++|..||...+.......+...
T Consensus       139 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~  215 (255)
T cd08219         139 VKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWE---NMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQG  215 (255)
T ss_pred             EEEcccCcceeecccccccccccCCccccCHHHHc---cCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcC
Confidence            99999999876654333334457889999999985   556889999999999999999999999887776666555544


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       154 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...+    .+..++..+.++|.+||+.||++||++.+++.
T Consensus       216 ~~~~----~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  251 (255)
T cd08219         216 SYKP----LPSHYSYELRSLIKQMFKRNPRSRPSATTILS  251 (255)
T ss_pred             CCCC----CCcccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence            3322    23557889999999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.97  E-value=4.8e-31  Score=229.47  Aligned_cols=188  Identities=14%  Similarity=0.181  Sum_probs=149.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-------------cccccccchhHHHhhHHHHHHHHHhCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-------------AIELAELQPPMFDLHPMRALFLMSKSGFKPP   63 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hr   63 (302)
                      |+++++.+.    .++||||+++++|. +++.....             ...+++..+..++.||+.||+|||++|++||
T Consensus        69 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~  147 (291)
T cd05094          69 IVKFYGVCGDGDPLIMVFEYMKHGDLN-KFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHR  147 (291)
T ss_pred             cceEEEEEccCCceEEEEecCCCCcHH-HHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence            455666544    58999999999999 77765320             1147888999999999999999999999999


Q ss_pred             CCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCC
Q psy3574          64 ALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQP  136 (302)
Q Consensus        64 dlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~  136 (302)
                      ||||    ++.++.+||+|||++........  ......++..|+|||.+.   +..++.++|||||||++|+|++ |..
T Consensus       148 dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~el~t~g~~  224 (291)
T cd05094         148 DLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM---YRKFTTESDVWSFGVILWEIFTYGKQ  224 (291)
T ss_pred             ccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhc---cCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            9999    78889999999999876543211  122345678899999985   5668899999999999999998 999


Q ss_pred             CCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         137 PMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       137 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ||...........+.......    .+..++..+.+++.+||+.+|.+||++.++++.+.
T Consensus       225 p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~  280 (291)
T cd05094         225 PWFQLSNTEVIECITQGRVLE----RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILH  280 (291)
T ss_pred             CCCCCCHHHHHHHHhCCCCCC----CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence            998877776665554432221    23456889999999999999999999999988554

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG0193|consensus

Probab=99.97  E-value=3.3e-32  Score=242.95  Aligned_cols=185  Identities=17%  Similarity=0.188  Sum_probs=152.1

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      +.||+.+|+|.+|+ ..++...  ..|.....+.|++||++|+.|||.++|||||||.    +.+++.|||+|||++..-
T Consensus       462 ~AIiTqwCeGsSLY-~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk  538 (678)
T KOG0193|consen  462 LAIITQWCEGSSLY-THLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK  538 (678)
T ss_pred             eeeeehhccCchhh-hhccchh--hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeee
Confidence            37999999999999 5554433  2788999999999999999999999999999999    777899999999998654


Q ss_pred             ccc--cccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCC
Q psy3574          86 TAT--INKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDK  163 (302)
Q Consensus        86 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  163 (302)
                      ...  ........|...|||||++.......|++.+||||||||+|||++|..||...+...++..+-++...+...+..
T Consensus       539 ~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~  618 (678)
T KOG0193|consen  539 TRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIR  618 (678)
T ss_pred             eeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhh
Confidence            322  122334457888999999987677889999999999999999999999999655555555555554455556666


Q ss_pred             CCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q psy3574         164 DRWSSTFHNFVKIALTKNPKKRPTADKLLQVILI  197 (302)
Q Consensus       164 ~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~  197 (302)
                      .++++++++|+..||..++++||.+.+||..+.-
T Consensus       619 s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~  652 (678)
T KOG0193|consen  619 SNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEE  652 (678)
T ss_pred             ccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHH
Confidence            7788899999999999999999999999985543

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.97  E-value=5.2e-31  Score=226.84  Aligned_cols=187  Identities=26%  Similarity=0.376  Sum_probs=146.4

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.+.    .++||||+.+|+|. +++...+   .+++..++.++.||+.||.|||++|++||||+|    ++.++.
T Consensus        71 ~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~  146 (272)
T cd06629          71 VQYLGFETTEEYLSIFLEYVPGGSIG-SCLRTYG---RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGI  146 (272)
T ss_pred             ceEEEEeccCCceEEEEecCCCCcHH-HHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCe
Confidence            45555433    58999999999999 7777666   799999999999999999999999999999999    778999


Q ss_pred             EEEecccccccccccc--ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATI--NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      ++|+|||++.......  .......|+..|+|||.+... ...++.++|+||||+++|+|++|..||...........+.
T Consensus       147 ~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~  225 (272)
T cd06629         147 CKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSY-SQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLG  225 (272)
T ss_pred             EEEeeccccccccccccccccccccCCccccCHHHhccc-cCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhh
Confidence            9999999987654321  112334678899999998521 1247889999999999999999999997666555444433


Q ss_pred             hcCCCCCC-CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPA-LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ........ ......++..+.++|.+||..+|.+||++.++++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         226 NKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             ccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            32211111 1122356899999999999999999999999999

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.97  E-value=3.3e-31  Score=226.66  Aligned_cols=181  Identities=25%  Similarity=0.420  Sum_probs=147.9

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh-CCCCCCCCcC----CCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK-SGFKPPALKD----KDRCG   72 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~i~Hrdlkp----~~~~~   72 (302)
                      +++++.+.    .|+||||+++++|. +++....   .+++..+..++.|++.||+|||+ .|++||||+|    ++.++
T Consensus        62 ~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~  137 (264)
T cd06623          62 VKCYGAFYKEGEISIVLEYMDGGSLA-DLLKKVG---KIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKG  137 (264)
T ss_pred             eeEEEEEccCCeEEEEEEecCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCC
Confidence            45555444    58999999999999 7777665   79999999999999999999999 9999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH---PMRALFL  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---~~~~~~~  149 (302)
                      .++|+|||.+..............++..|+|||.+.   ...++.++|+||||+++|+|++|..||....   .......
T Consensus       138 ~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~---~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~  214 (264)
T cd06623         138 EVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQ---GESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQA  214 (264)
T ss_pred             CEEEccCccceecccCCCcccceeecccccCHhhhC---CCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHH
Confidence            999999999987765433333456888999999985   5568899999999999999999999997763   3333333


Q ss_pred             HHhcCCCCCCCCCCCC-CCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDR-WSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~-~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.... .+   ..... ++..+.++|.+||..+|++||++.++++
T Consensus       215 ~~~~~-~~---~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~  255 (264)
T cd06623         215 ICDGP-PP---SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ  255 (264)
T ss_pred             HhcCC-CC---CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            33221 11   12234 7899999999999999999999999999

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.97  E-value=5.2e-31  Score=228.51  Aligned_cols=185  Identities=23%  Similarity=0.283  Sum_probs=144.8

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.+.    .|+||||++++.+. .+.....   .+++.++..++.||+.||.|||++|++|+|++|    ++.++.
T Consensus        63 ~~~~~~~~~~~~~~iv~e~~~~~~l~-~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~  138 (288)
T cd07833          63 VNLKEAFRRKGRLYLVFEYVERTLLE-LLEASPG---GLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGV  138 (288)
T ss_pred             eehhheEEECCEEEEEEecCCCCHHH-HHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCC
Confidence            45555554    58999999987776 6665555   699999999999999999999999999999999    788999


Q ss_pred             EEEeccccccccccccc-cccccccCcccchhhcccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKG-GYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~-~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||++........ ......++..|+|||++.   .. .++.++|+||+|+++|+|++|.+||.+....+....+.
T Consensus       139 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~---~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~  215 (288)
T cd07833         139 LKLCDFGFARALRARPASPLTDYVATRWYRAPELLV---GDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQ  215 (288)
T ss_pred             EEEEeeecccccCCCccccccCcccccCCcCCchhc---CCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            99999999887665432 233456788999999986   34 67899999999999999999999998766554443332


Q ss_pred             hcCC-------------------CCCCC--------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGF-------------------KPPAL--------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~-------------------~~~~~--------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....                   ..+..        ..+..++.++.+||++||..+|++||+++++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         216 KCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             HHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            2100                   00000        012234888999999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=8.8e-31  Score=227.38  Aligned_cols=187  Identities=25%  Similarity=0.406  Sum_probs=141.9

Q ss_pred             Cchhhhcc------hheeEEEecCCcchHHHHHHhcc-ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC
Q psy3574           1 MSRVFNHF------LQVAAVERKGGYNQQCDIWAVGI-TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD   69 (302)
Q Consensus         1 iv~~~~~~------~~~iv~E~~~~g~L~~~~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~   69 (302)
                      ||++++.+      .+|+||||++|++|. +++.... ....+++..+..++.||+.||+|||+.|++|+||+|    ++
T Consensus        61 iv~~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~  139 (287)
T cd06621          61 IVKYYGAFLDESSSSIGIAMEYCEGGSLD-SIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT  139 (287)
T ss_pred             eeeeeeEEEccCCCeEEEEEEecCCCCHH-HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe
Confidence            45666644      358999999999998 6654311 122588899999999999999999999999999999    77


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----ChH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL-----HPM  144 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-----~~~  144 (302)
                      .++.++|+|||++.......  .....++..|+|||.+.   ...++.++|+|||||++|+|++|..||...     ...
T Consensus       140 ~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~y~~pE~~~---~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~  214 (287)
T cd06621         140 RKGQVKLCDFGVSGELVNSL--AGTFTGTSFYMAPERIQ---GKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPI  214 (287)
T ss_pred             cCCeEEEeeccccccccccc--cccccCCccccCHHHhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChH
Confidence            88899999999987654322  12345788999999985   566889999999999999999999999765     222


Q ss_pred             HHHHHHHhcCCCCCC--CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         145 RALFLMSKSGFKPPA--LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       145 ~~~~~i~~~~~~~~~--~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +....+.........  ......++..+.+||.+||..+|.+|||+.+++.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         215 ELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             HHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            333232221111100  0111235678999999999999999999999999

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.97  E-value=4.4e-31  Score=229.06  Aligned_cols=184  Identities=38%  Similarity=0.686  Sum_probs=149.8

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.+.    .|+|+||++|++|. +++....  ..+++..+..++.|++.||+|||+.|++|+|++|    ++.++.
T Consensus        78 ~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~  154 (286)
T cd06614          78 VDYYDSYLVGDELWVVMEYMDGGSLT-DIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGS  154 (286)
T ss_pred             eEEEEEEEECCEEEEEEeccCCCcHH-HHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCC
Confidence            45555544    58999999999999 6766542  2689999999999999999999999999999999    778899


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      ++|+|||++..............++..|++||.+.   +..++.++|+|||||++|+|++|..||...+.......+...
T Consensus       155 ~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~  231 (286)
T cd06614         155 VKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIK---RKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK  231 (286)
T ss_pred             EEECccchhhhhccchhhhccccCCcccCCHhHhc---CCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence            99999999876554333333456788999999985   556889999999999999999999999887776655555443


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       154 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..  +.......++..+.++|.+||+.+|.+||++.++++
T Consensus       232 ~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         232 GI--PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             CC--CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            22  222233447899999999999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.97  E-value=3.2e-31  Score=235.16  Aligned_cols=186  Identities=17%  Similarity=0.240  Sum_probs=144.7

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~   68 (302)
                      ||++++.|.        .|+||||+.+ +|. .++....   .+++..++.++.||+.||+|||++|++||||||    +
T Consensus        66 iv~~~~~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~  140 (334)
T cd07855          66 IIAIRDILRPPGADFKDVYVVMDLMES-DLH-HIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV  140 (334)
T ss_pred             ccCHHHhccccCCCCceEEEEEehhhh-hHH-HHhccCC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE
Confidence            456666543        5899999965 888 7776666   699999999999999999999999999999999    8


Q ss_pred             CCCCCEEEecccccccccccccc----ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH
Q psy3574          69 DRCGDVKLADFGVSAQITATINK----RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM  144 (302)
Q Consensus        69 ~~~~~ikL~DFg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  144 (302)
                      +.+|.+||+|||++.........    .....|+..|+|||.+.  ....++.++|+||+||++|+|++|+.||.+.+..
T Consensus       141 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~--~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~  218 (334)
T cd07855         141 NEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLL--SLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV  218 (334)
T ss_pred             cCCCcEEecccccceeecccCcCCCcccccccccccccChHHhc--CCcccccccchHHHHHHHHHHHcCCCccCCCChH
Confidence            88999999999998766442211    12346888999999985  2345789999999999999999999999876655


Q ss_pred             HHHHHHHhcCCCCC-----------------------CC---CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         145 RALFLMSKSGFKPP-----------------------AL---KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       145 ~~~~~i~~~~~~~~-----------------------~~---~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....+......++                       ..   ......+..+.++|.+||+.+|.+||++.+++.
T Consensus       219 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         219 HQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             HHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            44333222111110                       00   011346889999999999999999999999999

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.97  E-value=8.2e-31  Score=226.88  Aligned_cols=188  Identities=19%  Similarity=0.229  Sum_probs=144.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||++ ++|. .++.... ...+++..+..++.|++.||+|||+++++||||+|    ++.++
T Consensus        60 iv~~~~~~~~~~~~~iv~e~~~-~~l~-~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~  136 (283)
T cd07835          60 IVRLLDVVHSENKLYLVFEFLD-LDLK-KYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREG  136 (283)
T ss_pred             ccCHhheeccCCeEEEEEeccC-cCHH-HHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC
Confidence            456666655    589999996 5888 6655432 12589999999999999999999999999999999    77799


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .++|+|||++..............++..|+|||++.  ....++.++|+||+|+++|+|++|++||...+.......+..
T Consensus       137 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~  214 (283)
T cd07835         137 ALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL--GSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFR  214 (283)
T ss_pred             cEEEeecccccccCCCccccCccccccCCCCCceee--cCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            999999999876543322223345688999999875  233468899999999999999999999987766555444333


Q ss_pred             cCCCC------------------------CCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKP------------------------PALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~------------------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+                        ........++..+.++|.+||+.+|.+|||++++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         215 TLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             HhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            21110                        001113456789999999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.97  E-value=1.1e-30  Score=222.59  Aligned_cols=184  Identities=20%  Similarity=0.357  Sum_probs=147.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+|+||+.+++|. +++.... +..+++..+..++.|++.||.|||+++++|+||+|    ++.++
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~  138 (257)
T cd08225          61 IVTFFASFQENGRLFIVMEYCDGGDLM-KRINRQR-GVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNG  138 (257)
T ss_pred             hhhhhheeccCCeEEEEEecCCCCcHH-HHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCC
Confidence            456666554    58999999999999 6665432 12578999999999999999999999999999999    55554


Q ss_pred             -CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          73 -DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 -~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                       .+||+|||.+..............|+..|+|||++.   ...++.++|+||+|+++++|++|..||...+.......+.
T Consensus       139 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~  215 (257)
T cd08225         139 MVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQ---NRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKIC  215 (257)
T ss_pred             CeEEecccccchhccCCcccccccCCCccccCHHHHc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh
Confidence             569999999887655433333456889999999985   5567899999999999999999999998776666555544


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....    .....++..+.++|.+||..+|++|||+.++++
T Consensus       216 ~~~~~----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         216 QGYFA----PISPNFSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             cccCC----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            43221    123457889999999999999999999999999

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.97  E-value=4.5e-31  Score=232.02  Aligned_cols=190  Identities=25%  Similarity=0.347  Sum_probs=142.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.|.    .|++|||+++|+|. .++.... ...+++..++.++.|++.||+|||++||+||||+|    ++.++
T Consensus        61 i~~~~~~~~~~~~~~~~~e~~~~~~l~-~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~  138 (314)
T cd08216          61 ILPYVTSFIVDSELYVVSPLMAYGSCE-DLLKTHF-PEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDG  138 (314)
T ss_pred             hhhhhheeecCCeEEEEEeccCCCCHH-HHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCC
Confidence            456666555    58999999999999 7776532 12588999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccc-------cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          73 DVKLADFGVSAQITATIN-------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                      .+||+|||.+........       ......++..|+|||++... ...++.++|+||+||++|+|++|..||.......
T Consensus       139 ~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~  217 (314)
T cd08216         139 KVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQN-LQGYNEKSDIYSVGITACELANGHVPFKDMPATQ  217 (314)
T ss_pred             ceEEecCccceeeccccccccccccccccccccccccCHHHhcCC-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            999999998876543211       11233567789999998521 2457889999999999999999999998765544


Q ss_pred             HHHHHHhcCCCC-----------------------------CCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFKP-----------------------------PALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~-----------------------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ............                             ........++.++.+|+.+||+.||++|||+.++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         218 MLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             HHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence            332222111000                             000011234567899999999999999999999999

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=9.7e-31  Score=223.38  Aligned_cols=183  Identities=15%  Similarity=0.181  Sum_probs=148.0

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++++.+.   .++||||+.+|+|. +++....   .+++..+..++.|++.||+|||.+|++||||+|    ++.++.
T Consensus        58 iv~~~~~~~~~~~~~v~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~  133 (257)
T cd05060          58 IVRLIGVCKGEPLMLVMELAPLGPLL-KYLKKRR---EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQ  133 (257)
T ss_pred             eeeEEEEEcCCceEEEEEeCCCCcHH-HHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCc
Confidence            355555433   58999999999999 7777665   799999999999999999999999999999999    888999


Q ss_pred             EEEecccccccccccccccc---ccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          74 VKLADFGVSAQITATINKRK---SFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      +||+|||.++..........   ...++..|+|||.+.   ...++.++|+|||||++|+|++ |..||...+.......
T Consensus       134 ~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~  210 (257)
T cd05060         134 AKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECIN---YGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAM  210 (257)
T ss_pred             EEeccccccceeecCCcccccccCccccccccCHHHhc---CCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence            99999999987654322211   112345799999985   5668899999999999999998 9999988777666555


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      +.....    ...+..++..+.++|.+||..+|++||++.++++.
T Consensus       211 ~~~~~~----~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~  251 (257)
T cd05060         211 LESGER----LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELEST  251 (257)
T ss_pred             HHcCCc----CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            544322    12345678999999999999999999999999883

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.97  E-value=3.4e-31  Score=229.15  Aligned_cols=187  Identities=26%  Similarity=0.404  Sum_probs=142.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhc-cccccccccchhHHHhhHHHHHHHHHhC-CCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSKS-GFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp----~~~   70 (302)
                      ||++++.+.    .|+||||++| +|. .++... .....+++..+..++.||+.||+|||++ +++||||+|    ++.
T Consensus        62 iv~~~~~~~~~~~~~lv~e~~~~-~l~-~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~  139 (283)
T cd06617          62 TVTFYGALFREGDVWICMEVMDT-SLD-KFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINR  139 (283)
T ss_pred             eeeeeEEEecCCcEEEEhhhhcc-cHH-HHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC
Confidence            456666554    5899999975 787 555432 2123689999999999999999999998 999999999    788


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCC-ChHHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVER-KGGYNQQCDIWAVGITAIELAELQPPMFDL-HPMRALF  148 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~-~~~~~~~  148 (302)
                      ++.+||+|||++....... ......++..|+|||.+.+.. ...++.++|+||+||++|+|++|+.||... ...+...
T Consensus       140 ~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~  218 (283)
T cd06617         140 NGQVKLCDFGISGYLVDSV-AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLK  218 (283)
T ss_pred             CCCEEEeeccccccccccc-ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHH
Confidence            9999999999987664321 222346888999999885321 255788999999999999999999999653 2333333


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+....  .+.. ....++.++.++|.+||..+|.+||++.++++
T Consensus       219 ~~~~~~--~~~~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         219 QVVEEP--SPQL-PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             HHHhcC--CCCC-CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            333221  1111 12457899999999999999999999999999

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.97  E-value=5.3e-31  Score=229.05  Aligned_cols=186  Identities=19%  Similarity=0.211  Sum_probs=138.0

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.+.    .|+||||+.+ +|. +++....  ..+++..++.++.|++.||.|||++|++||||+|    ++.++.
T Consensus        66 ~~~~~~~~~~~~~~lv~e~~~~-~L~-~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~  141 (291)
T cd07844          66 VTLHDIIHTKKTLTLVFEYLDT-DLK-QYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGE  141 (291)
T ss_pred             eeEEEEEecCCeEEEEEecCCC-CHH-HHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCC
Confidence            45555444    5899999986 898 6655432  1688999999999999999999999999999999    888899


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHh
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH-PMRALFLMSK  152 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~~~~i~~  152 (302)
                      +||+|||++..............++..|+|||++.  ....++.++||||+||++|+|++|..||.+.. ..+....+..
T Consensus       142 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~  219 (291)
T cd07844         142 LKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLL--GSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFR  219 (291)
T ss_pred             EEECccccccccCCCCccccccccccccCCcHHhh--cCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHH
Confidence            99999999875433222222335688899999985  23457889999999999999999999997655 2232222221


Q ss_pred             cCCCC-------------------------CCCCCCCCCC--HHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKP-------------------------PALKDKDRWS--STFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~-------------------------~~~~~~~~~s--~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+                         +.......++  ..+.+++.+||..+|++|||+.++++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         220 VLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             hcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence            10000                         0000011233  78899999999999999999999999

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.97  E-value=5.7e-31  Score=236.99  Aligned_cols=155  Identities=21%  Similarity=0.315  Sum_probs=122.8

Q ss_pred             cccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccccccccc--ccccccCcccchhhccc
Q psy3574          35 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAA  108 (302)
Q Consensus        35 ~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~  108 (302)
                      .+++..+..++.||+.||+|||++||+||||||    ++.++.+||+|||+++........  .....++..|+|||++.
T Consensus       210 ~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  289 (375)
T cd05104         210 ALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIF  289 (375)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhc
Confidence            467778889999999999999999999999999    777889999999999766443211  11223456799999995


Q ss_pred             ccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC
Q psy3574         109 VERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT  187 (302)
Q Consensus       109 ~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t  187 (302)
                         +..++.++|||||||++|+|++ |..||...............+....   .+...+.++.++|.+||+.||++||+
T Consensus       290 ---~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs  363 (375)
T cd05104         290 ---NCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRML---SPECAPSEMYDIMKSCWDADPLKRPT  363 (375)
T ss_pred             ---CCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCC---CCCCCCHHHHHHHHHHccCChhHCcC
Confidence               6678999999999999999998 8999987665544444444433222   12445789999999999999999999


Q ss_pred             HHHHHHHH
Q psy3574         188 ADKLLQVI  195 (302)
Q Consensus       188 ~~~ll~~l  195 (302)
                      +.++++.+
T Consensus       364 ~~eil~~l  371 (375)
T cd05104         364 FKQIVQLI  371 (375)
T ss_pred             HHHHHHHH
Confidence            99999854

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.97  E-value=1.1e-30  Score=222.92  Aligned_cols=183  Identities=16%  Similarity=0.158  Sum_probs=147.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++|+.+.    .|+||||+++|+|. +++....  ..+++..+..++.|++.||+|||++|++||||+|    ++.++
T Consensus        61 i~~~~~~~~~~~~~~iv~e~~~~~~L~-~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~  137 (256)
T cd05114          61 LVQLYGVCTQQKPLYIVTEFMENGCLL-NYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTG  137 (256)
T ss_pred             ceeEEEEEccCCCEEEEEEcCCCCcHH-HHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCC
Confidence            456666554    58999999999999 6665432  1588999999999999999999999999999999    77889


Q ss_pred             CEEEecccccccccccccc-ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINK-RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||.+......... .....++..|+|||.+.   ...++.++|+||+|+++|+|++ |+.||...+.......+
T Consensus       138 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i  214 (256)
T cd05114         138 VVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFN---FSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMI  214 (256)
T ss_pred             eEEECCCCCccccCCCceeccCCCCCchhhCChhhcc---cCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            9999999998765432211 11223456899999985   5568899999999999999999 99999888777777666


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ......    ..+...+..+.+++.+||..+|++||++.++++
T Consensus       215 ~~~~~~----~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         215 SRGFRL----YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             HCCCCC----CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            554321    113446788999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.97  E-value=1.2e-30  Score=223.17  Aligned_cols=185  Identities=23%  Similarity=0.370  Sum_probs=147.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---~~~~~   72 (302)
                      |+++++.+.    .|+|+||+++++|. .++.. ...+..+++..++.++.|++.||.|||++|++|+|++|   +-.++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~  142 (260)
T cd08222          64 IVKFHASFLERDAFCIITEYCEGRDLD-CKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNN  142 (260)
T ss_pred             HHHHHHHHhcCCceEEEEEeCCCCCHH-HHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecC
Confidence            355666554    58999999999998 66543 12223699999999999999999999999999999999   33457


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............|+..|+|||.+.   ...++.++|+||+|+++|+|++|..||...........+..
T Consensus       143 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~  219 (260)
T cd08222         143 LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALK---HQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE  219 (260)
T ss_pred             CEeecccCceeecCCCcccccCCCCCcCccCHHHHc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc
Confidence            799999999877654433444556888999999985   56678899999999999999999999987666555544443


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..  .+.  .+..++.++.++|.+||..+|++||++.++++
T Consensus       220 ~~--~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         220 GP--TPS--LPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             CC--CCC--CcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence            21  111  23567889999999999999999999999999

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.97  E-value=5.4e-31  Score=228.04  Aligned_cols=189  Identities=19%  Similarity=0.225  Sum_probs=144.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++ +|. .++........+++..+..++.|++.||.|||+.|++||||+|    ++.++
T Consensus        60 i~~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~  137 (284)
T cd07836          60 IVRLHDVIHTENKLMLVFEYMDK-DLK-KYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRG  137 (284)
T ss_pred             EeeeeeeEeeCCcEEEEEecCCc-cHH-HHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC
Confidence            345555554    5899999986 888 6665543233689999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||.+..............++..|++||.+.+  ...++.++|+||+||++|+|++|+.||.+.+..+....+..
T Consensus       138 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~  215 (284)
T cd07836         138 ELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLG--SRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFR  215 (284)
T ss_pred             cEEEeecchhhhhcCCccccccccccccccChHHhcC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Confidence            9999999998765443233334467889999999852  34478899999999999999999999987766555444432


Q ss_pred             cCCCC------------------CCC------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKP------------------PAL------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~------------------~~~------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+                  +..      .....++..+.++|.+||+.||.+||++.++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         216 IMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             HhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            11000                  000      001245788999999999999999999999999

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.97  E-value=1.1e-30  Score=228.68  Aligned_cols=189  Identities=15%  Similarity=0.158  Sum_probs=142.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc----------------cccccccchhHHHhhHHHHHHHHHhCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT----------------AIELAELQPPMFDLHPMRALFLMSKSGF   60 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~----------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i   60 (302)
                      ||++++.+.    .|+||||+++|+|. +++.....                ...+++..+..++.||+.||.|||++||
T Consensus        81 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i  159 (304)
T cd05096          81 IIRLLGVCVDEDPLCMITEYMENGDLN-QFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF  159 (304)
T ss_pred             eeEEEEEEecCCceEEEEecCCCCcHH-HHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCc
Confidence            466776555    58999999999999 66654320                1135667788999999999999999999


Q ss_pred             CCCCCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-
Q psy3574          61 KPPALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-  133 (302)
Q Consensus        61 ~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-  133 (302)
                      +||||||    ++.++.+||+|||+++.+.....  ......++..|+|||++.   ...++.++|||||||++|+|++ 
T Consensus       160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~~  236 (304)
T cd05096         160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECIL---MGKFTTASDVWAFGVTLWEILML  236 (304)
T ss_pred             cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHh---cCCCCchhhhHHHHHHHHHHHHc
Confidence            9999999    78889999999999876543211  112234577899999985   5668999999999999999986 


Q ss_pred             -CCCCCCCCChHHHHHHHHhc---CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         134 -LQPPMFDLHPMRALFLMSKS---GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       134 -g~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                       +..||...........+...   .........+..++..+.+++.+||..+|.+|||+.++.+
T Consensus       237 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         237 CKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             cCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence             66788776655544433221   1111111223457889999999999999999999999976

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.97  E-value=1.8e-30  Score=224.61  Aligned_cols=187  Identities=16%  Similarity=0.156  Sum_probs=147.5

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++++.+.   .++|+||+.+|+|. +++....  ..+++..+..++.||+.||+|||++|++||||||    ++.++.
T Consensus        71 iv~~~~~~~~~~~~~i~e~~~~gsL~-~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~  147 (279)
T cd05111          71 IVRLLGICPGASLQLVTQLSPLGSLL-DHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSI  147 (279)
T ss_pred             cceEEEEECCCccEEEEEeCCCCcHH-HHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCc
Confidence            466666543   57999999999999 6665432  2689999999999999999999999999999999    788899


Q ss_pred             EEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          74 VKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      +||+|||.++.......  ......++..|+|||.+.   ...++.++|+|||||++|+|++ |..||.+.........+
T Consensus       148 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~---~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~  224 (279)
T cd05111         148 VQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESIL---FGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLL  224 (279)
T ss_pred             EEEcCCccceeccCCCcccccCCCCCcccccCHHHhc---cCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            99999999976543211  122334677899999985   5668999999999999999998 99999887666544444


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILI  197 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~  197 (302)
                      .... .++   .+..++..+.+++.+||..+|.+|||+.++++.+..
T Consensus       225 ~~~~-~~~---~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~  267 (279)
T cd05111         225 EKGE-RLA---QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTR  267 (279)
T ss_pred             HCCC-cCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence            3322 222   134467889999999999999999999999885543

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.97  E-value=6.8e-31  Score=228.42  Aligned_cols=186  Identities=19%  Similarity=0.204  Sum_probs=136.5

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.+.    .|+||||+.+ +|.+.+.....   .+++..++.++.|++.||+|||++||+||||||    ++.++.
T Consensus        66 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~  141 (291)
T cd07870          66 VLLHDIIHTKETLTFVFEYMHT-DLAQYMIQHPG---GLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGE  141 (291)
T ss_pred             eEEEEEEecCCeEEEEEecccC-CHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCc
Confidence            44555444    5899999975 77634444444   678889999999999999999999999999999    788999


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHh
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM-RALFLMSK  152 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~  152 (302)
                      +||+|||+++.............++..|+|||.+.  ....++.++|+|||||++|+|++|..||...... +.+..+..
T Consensus       142 ~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~  219 (291)
T cd07870         142 LKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLL--GATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWT  219 (291)
T ss_pred             EEEeccccccccCCCCCCCCCccccccccCCceee--cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHH
Confidence            99999999876543322233446788999999985  2344788999999999999999999999765432 22222211


Q ss_pred             cCCCC------------------------CCCC---CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKP------------------------PALK---DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~------------------------~~~~---~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .-..+                        ....   .....+..+.+++.+||..||.+|||+.+++.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         220 VLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             HcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            00000                        0000   00112578999999999999999999999999

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.97  E-value=5.2e-31  Score=225.09  Aligned_cols=181  Identities=22%  Similarity=0.325  Sum_probs=146.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+|+||+.|++|. ..+....   ++++..+..++.||+.||.|||++|++|+||+|    ++.++
T Consensus        62 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~  137 (258)
T cd05578          62 LVNLWYSFQDEENMYLVVDLLLGGDLR-YHLSQKV---KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQG  137 (258)
T ss_pred             hHHHHHhhcCCCeEEEEEeCCCCCCHH-HHHHhcC---CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCC
Confidence            345555444    58999999999999 7777665   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHP--MRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i  150 (302)
                      .++|+|||.+....... ......|+..|+|||.+.   ...++.++|+||||+++|+|++|..||.....  .......
T Consensus       138 ~~~l~d~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~---~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~  213 (258)
T cd05578         138 HVHITDFNIATKVTPDT-LTTSTSGTPGYMAPEVLC---RQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAK  213 (258)
T ss_pred             CEEEeecccccccCCCc-cccccCCChhhcCHHHHc---ccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHH
Confidence            99999999987765432 233456888999999986   45578999999999999999999999987663  2222222


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH--HHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA--DKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~--~~ll~  193 (302)
                      ...    .....+..++..+.++|.+||..+|.+||++  .++++
T Consensus       214 ~~~----~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~  254 (258)
T cd05578         214 QET----ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN  254 (258)
T ss_pred             hcc----ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence            211    1222345678999999999999999999999  99999

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.97  E-value=1e-30  Score=223.51  Aligned_cols=184  Identities=15%  Similarity=0.134  Sum_probs=145.6

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.   .|+||||+++|+|. +++.. ..   .+++..+..++.|++.||+|||++|++||||||    ++.++
T Consensus        57 ii~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~  132 (257)
T cd05115          57 IVRMIGVCEAEALMLVMEMASGGPLN-KFLSGKKD---EITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQH  132 (257)
T ss_pred             eEEEEEEEcCCCeEEEEEeCCCCCHH-HHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCC
Confidence            345555433   58999999999999 66654 33   689999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccccc---cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKR---KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALF  148 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~  148 (302)
                      .+||+|||++..........   ....++..|+|||.+.   ...++.++|+|||||++|+|++ |..||..........
T Consensus       133 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~  209 (257)
T cd05115         133 YAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECIN---FRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMS  209 (257)
T ss_pred             cEEeccCCccccccCCccceeccCCCCCCcccCCHHHHc---cCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHH
Confidence            99999999987654332211   1112356899999985   5568899999999999999996 999998887776665


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .+..... +   ..+..++.++.++|.+||..+|++||++.++.+.+
T Consensus       210 ~~~~~~~-~---~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l  252 (257)
T cd05115         210 FIEQGKR-L---DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERM  252 (257)
T ss_pred             HHHCCCC-C---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            5544322 1   12356789999999999999999999999998743

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.97  E-value=1e-30  Score=225.58  Aligned_cols=181  Identities=18%  Similarity=0.268  Sum_probs=149.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++++|. +++....   .+++..+..++.|++.||.|||++|++|+||+|    ++.++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~  139 (280)
T cd05581          64 IIKLYYTFQDEENLYFVLEYAPNGELL-QYIRKYG---SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDM  139 (280)
T ss_pred             chhHHHHhcCCceEEEEEcCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC
Confidence            455665543    68999999999999 7777766   799999999999999999999999999999999    88889


Q ss_pred             CEEEecccccccccccc--------------------ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATI--------------------NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA  132 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~--------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell  132 (302)
                      .++|+|||.+.......                    .......++..|+|||+..   ...++.++|+||||+++++++
T Consensus       140 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~~~~~~~Di~slG~~l~~l~  216 (280)
T cd05581         140 HIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLN---EKPAGKSSDLWALGCIIYQML  216 (280)
T ss_pred             CEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhC---CCCCChhhhHHHHHHHHHHHH
Confidence            99999999987664422                    1122345788999999985   455788999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH----HHHHH
Q psy3574         133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA----DKLLQ  193 (302)
Q Consensus       133 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~----~~ll~  193 (302)
                      +|..||...........+......     .+..++..+.+||.+||+.+|.+||++    +++++
T Consensus       217 ~g~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         217 TGKPPFRGSNEYLTFQKILKLEYS-----FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             hCCCCCCCccHHHHHHHHHhcCCC-----CCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            999999887765555555433222     235668999999999999999999999    99999

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.97  E-value=1.3e-30  Score=222.93  Aligned_cols=186  Identities=15%  Similarity=0.141  Sum_probs=149.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++|+|. +++.... +..+++..+..++.||+.||.|||++|++||||+|    ++.++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~  141 (261)
T cd05148          64 LISLFAVCSVGEPVYIITELMEKGSLL-AFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDL  141 (261)
T ss_pred             hhheeeeEecCCCeEEEEeecccCCHH-HHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCc
Confidence            355555444    58999999999999 6666532 23688999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      .+||+|||.+..............++..|+|||.+.   ...++.++|+||||+++|+|++ |+.||...+..+....+.
T Consensus       142 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~---~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~  218 (261)
T cd05148         142 VCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAAS---HGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT  218 (261)
T ss_pred             eEEEccccchhhcCCccccccCCCCceEecCHHHHc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH
Confidence            999999999977654322223334567899999985   5568899999999999999998 899998877766666555


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ... ..   ..+..++..+.+++.+||+.+|.+|||+.++++.|
T Consensus       219 ~~~-~~---~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L  258 (261)
T cd05148         219 AGY-RM---PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREEL  258 (261)
T ss_pred             hCC-cC---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence            332 22   22356789999999999999999999999998843

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.97  E-value=7.1e-31  Score=227.91  Aligned_cols=190  Identities=23%  Similarity=0.380  Sum_probs=139.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHh--ccccccccccchhHHHhhHHHHHHHHHhC-CCCCCCCcC----CC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAV--GITAIELAELQPPMFDLHPMRALFLMSKS-GFKPPALKD----KD   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~--~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp----~~   69 (302)
                      ||++++.++    .+++|||+.+ +|. .+...  ......+++..+..++.|++.||+|||+. |++||||+|    ++
T Consensus        65 iv~~~~~~~~~~~~~~~~e~~~~-~l~-~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~  142 (288)
T cd06616          65 IVKFYGALFREGDCWICMELMDI-SLD-KFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD  142 (288)
T ss_pred             EeeeeeEEecCCcEEEEEecccC-CHH-HHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc
Confidence            467777654    4899999875 554 32221  00012689999999999999999999985 999999999    77


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM-RALF  148 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~  148 (302)
                      .++.+||+|||++....... ......|+..|+|||++.......++.++|+||+||++|+|++|+.||...... ....
T Consensus       143 ~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~  221 (288)
T cd06616         143 RNGNIKLCDFGISGQLVDSI-AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLT  221 (288)
T ss_pred             cCCcEEEeecchhHHhccCC-ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHh
Confidence            88999999999987665432 223346888999999986221136889999999999999999999999765421 2222


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+...............++.++.+||.+||+.+|++|||++++++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         222 QVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             hhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            222211111111122457899999999999999999999999999

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.97  E-value=1.3e-30  Score=225.15  Aligned_cols=186  Identities=16%  Similarity=0.226  Sum_probs=145.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-------cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC--
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-------AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD--   67 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp--   67 (302)
                      ||++++.+.    .|+||||+.+|+|. +++.....       ...+++..+..++.|++.||.|||+.|++||||||  
T Consensus        71 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~N  149 (277)
T cd05062          71 VVRLLGVVSQGQPTLVIMELMTRGDLK-SYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARN  149 (277)
T ss_pred             eeeEEEEEcCCCCeEEEEecCCCCCHH-HHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchhe
Confidence            355555544    58999999999999 77654321       01245667888999999999999999999999999  


Q ss_pred             --CCCCCCEEEecccccccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q psy3574          68 --KDRCGDVKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLH  142 (302)
Q Consensus        68 --~~~~~~ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~  142 (302)
                        ++.++.+||+|||++.........  .....++..|+|||.+.   +..++.++|+|||||++|+|++ |..||.+..
T Consensus       150 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~  226 (277)
T cd05062         150 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK---DGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS  226 (277)
T ss_pred             EEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhh---cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence              888999999999998765432111  11234577899999985   5668899999999999999999 789998877


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         143 PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       143 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      .......+.......    .+..++..+.+++.+||+.+|++|||+.++++.
T Consensus       227 ~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         227 NEQVLRFVMEGGLLD----KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             HHHHHHHHHcCCcCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            766665555443221    235578899999999999999999999999883

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.4e-30  Score=221.12  Aligned_cols=180  Identities=22%  Similarity=0.347  Sum_probs=148.9

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.+.    .|+||||+++++|. +++....   .+++..+..++.|++.||.|||+.+++|+||+|    ++.++.
T Consensus        56 ~~~~~~~~~~~~~~~v~e~~~~~~L~-~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~  131 (250)
T cd05123          56 VKLHYAFQTEEKLYLVLEYAPGGELF-SHLSKEG---RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGH  131 (250)
T ss_pred             HHHHHHeecCCeeEEEEecCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCc
Confidence            44555544    59999999999999 7777766   699999999999999999999999999999999    778899


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      ++|+|||.+..............++..|++||...   ....+.++|+||||+++|+|++|..||...+.......+...
T Consensus       132 ~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~  208 (250)
T cd05123         132 IKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLL---GKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD  208 (250)
T ss_pred             EEEeecCcceecccCCCcccCCcCCccccChHHhC---CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC
Confidence            99999999877654322334456888999999985   555788999999999999999999999877665555555442


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH---HHHHH
Q psy3574         154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA---DKLLQ  193 (302)
Q Consensus       154 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~---~~ll~  193 (302)
                      .     ...+..++..+.++|.+||..||++||++   +++++
T Consensus       209 ~-----~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~  246 (250)
T cd05123         209 P-----LRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKA  246 (250)
T ss_pred             C-----CCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHh
Confidence            2     22345568999999999999999999999   89999

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.97  E-value=6.3e-31  Score=232.71  Aligned_cols=177  Identities=22%  Similarity=0.245  Sum_probs=144.2

Q ss_pred             hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      ..|+||||+.+ +|. .++....   .+++..++.++.||+.||+|||++||+||||+|    ++.++.++|+|||.+..
T Consensus        78 ~~~lv~e~~~~-~l~-~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~  152 (330)
T cd07834          78 DVYIVTELMET-DLH-KVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARG  152 (330)
T ss_pred             ceEEEecchhh-hHH-HHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence            45899999985 888 7777666   799999999999999999999999999999999    88889999999999987


Q ss_pred             ccccc---ccccccccCcccchhhcccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCC
Q psy3574          85 ITATI---NKRKSFIGTPYWMAPEVAAVERKG-GYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL  160 (302)
Q Consensus        85 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  160 (302)
                      .....   .......++..|+|||.+.   +. .++.++|+||+|+++|+|++|.+||.+.+.......+......++..
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  229 (330)
T cd07834         153 VDPDEDEKGFLTEYVVTRWYRAPELLL---SSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEE  229 (330)
T ss_pred             ecccccccccccccccccCcCCceeee---cccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChh
Confidence            76543   1233456788999999996   33 68899999999999999999999998877766555554422111100


Q ss_pred             --------------------------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         161 --------------------------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       161 --------------------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                                .....++..+.++|.+||+.+|.+||+++++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  288 (330)
T cd07834         230 DLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA  288 (330)
T ss_pred             HhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence                                      011236788999999999999999999999999

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.97  E-value=6.2e-31  Score=230.54  Aligned_cols=180  Identities=35%  Similarity=0.636  Sum_probs=143.3

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      +++++.+.    .|+|+||+.| +|. +++.. ..   .+++..+..++.|++.||.|||+.|++||||+|    ++.++
T Consensus        78 v~~~~~~~~~~~~~lv~e~~~g-~l~-~~~~~~~~---~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~  152 (307)
T cd06607          78 IEYKGCYLREHTAWLVMEYCLG-SAS-DILEVHKK---PLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPG  152 (307)
T ss_pred             EEEEEEEEeCCeEEEEHHhhCC-CHH-HHHHHccc---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCC
Confidence            45554443    5899999986 666 44443 33   689999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++......    ....++..|+|||++.......++.++||||+|+++|+|++|+.||.+.+.......+..
T Consensus       153 ~~kL~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~  228 (307)
T cd06607         153 TVKLADFGSASLVSPA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ  228 (307)
T ss_pred             CEEEeecCcceecCCC----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc
Confidence            9999999998654322    244678899999998532345578899999999999999999999988777666555543


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..  .+.. ....++..+.++|.+||..+|++||++.+++.
T Consensus       229 ~~--~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  266 (307)
T cd06607         229 ND--SPTL-SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK  266 (307)
T ss_pred             CC--CCCC-CchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            32  1111 12446889999999999999999999999999

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.97  E-value=7.4e-31  Score=226.67  Aligned_cols=181  Identities=39%  Similarity=0.678  Sum_probs=147.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+.+|+|. .++...    .+++..+..++.|++.||.|||++|++|+||+|    ++.++
T Consensus        64 iv~~~~~~~~~~~~~lv~e~~~~~~l~-~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~  138 (277)
T cd06641          64 VTKYYGSYLKDTKLWIIMEYLGGGSAL-DLLEPG----PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG  138 (277)
T ss_pred             EeEEEEEEEeCCeEEEEEEeCCCCcHH-HHHhcC----CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCC
Confidence            356666555    68999999999999 777543    589999999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .++|+|||++..+...........++..|+|||.+.   ...++.++|+||+||++|+|++|..||...........+..
T Consensus       139 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~  215 (277)
T cd06641         139 EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIK---QSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPK  215 (277)
T ss_pred             CEEEeecccceecccchhhhccccCCccccChhhhc---cCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhc
Confidence            999999999876654322333456888999999985   55678899999999999999999999987766555544433


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..  .+.  ....++..+.+++.+||..+|.+||++.++++
T Consensus       216 ~~--~~~--~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  252 (277)
T cd06641         216 NN--PPT--LEGNYSKPLKEFVEACLNKEPSFRPTAKELLK  252 (277)
T ss_pred             CC--CCC--CCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            22  111  23457889999999999999999999999999

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.97  E-value=1.6e-30  Score=228.61  Aligned_cols=199  Identities=34%  Similarity=0.648  Sum_probs=155.8

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      +++++.+.    .|+||||+.| +|. +++.. ..   ++++.++..++.||+.||.|||++|++|+||+|    +..++
T Consensus        84 v~~~~~~~~~~~~~lv~e~~~~-~l~-~~l~~~~~---~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~  158 (313)
T cd06633          84 IEYKGCYLKEHTAWLVMEYCLG-SAS-DLLEVHKK---PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG  158 (313)
T ss_pred             ccEEEEEEeCCEEEEEEecCCC-CHH-HHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCC
Confidence            45555443    5899999975 777 45543 34   689999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++.....    .....|+..|+|||.+.......++.++|+||+||++|+|++|..||...+.......+..
T Consensus       159 ~~kL~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~  234 (313)
T cd06633         159 QVKLADFGSASKSSP----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ  234 (313)
T ss_pred             CEEEeecCCCcccCC----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Confidence            999999998864322    2345688899999998532245578899999999999999999999988877666666554


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVA  232 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~  232 (302)
                      ...  +.. ....++..+++|+.+||+.+|.+||++.+++.                          ||||+........
T Consensus       235 ~~~--~~~-~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~--------------------------~~~~~~~~~~~~~  285 (313)
T cd06633         235 NDS--PTL-QSNEWTDSFRGFVDYCLQKIPQERPASAELLR--------------------------HDFVRRDRPARVL  285 (313)
T ss_pred             cCC--CCC-CccccCHHHHHHHHHHccCChhhCcCHHHHhc--------------------------CcccCCCchhHHH
Confidence            322  111 12456788999999999999999999999999                          9999976665555


Q ss_pred             HHHhhh
Q psy3574         233 IELLQK  238 (302)
Q Consensus       233 ~~~~~~  238 (302)
                      .+.++.
T Consensus       286 ~~~~~~  291 (313)
T cd06633         286 IDLIQR  291 (313)
T ss_pred             HHHHHH
Confidence            444443

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.97  E-value=7.8e-31  Score=234.36  Aligned_cols=173  Identities=19%  Similarity=0.241  Sum_probs=136.4

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+.+ +|. ..+..     .+++..+..++.|++.||+|||++||+||||||    ++.++.+||+|||++...
T Consensus        96 ~~lv~e~~~~-~l~-~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~  168 (353)
T cd07850          96 VYLVMELMDA-NLC-QVIQM-----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  168 (353)
T ss_pred             EEEEEeccCC-CHH-HHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeC
Confidence            4899999976 777 55542     378889999999999999999999999999999    888899999999999876


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC-------
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP-------  158 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-------  158 (302)
                      ... .......++..|+|||.+.   +..++.++|||||||++|+|++|+.||...+.......+......++       
T Consensus       169 ~~~-~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (353)
T cd07850         169 GTS-FMMTPYVVTRYYRAPEVIL---GMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRL  244 (353)
T ss_pred             CCC-CCCCCCcccccccCHHHHh---CCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence            543 2233456889999999986   66789999999999999999999999987765544443322111100       


Q ss_pred             ------------------------CC-------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         159 ------------------------AL-------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       159 ------------------------~~-------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                              ..       ......+..+++||.+||+.||.+|||+.++|+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~  310 (353)
T cd07850         245 QPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ  310 (353)
T ss_pred             hhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                                    00       001134667899999999999999999999999

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.97  E-value=9.1e-31  Score=232.24  Aligned_cols=186  Identities=20%  Similarity=0.201  Sum_probs=144.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+.| +|. .++....   .+++..+..++.|++.||+|||++|++|+||+|    ++.++
T Consensus        82 iv~~~~~~~~~~~~~lv~e~~~~-~l~-~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~  156 (335)
T PTZ00024         82 IMGLVDVYVEGDFINLVMDIMAS-DLK-KVVDRKI---RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKG  156 (335)
T ss_pred             eeeeeEEEecCCcEEEEEecccc-CHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCC
Confidence            355555544    5899999975 888 7777665   799999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccc--------------cccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCC
Q psy3574          73 DVKLADFGVSAQITAT--------------INKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPM  138 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf  138 (302)
                      .+||+|||.+......              ........++..|+|||.+.  ....++.++|+|||||++|+|++|.+||
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~Dv~slG~~l~el~tg~~p~  234 (335)
T PTZ00024        157 ICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLM--GAEKYHFAVDMWSVGCIFAELLTGKPLF  234 (335)
T ss_pred             CEEECCccceeecccccccccccccccccccccccccccccCCCCChhcc--cCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence            9999999998765411              11122334678899999985  2344689999999999999999999999


Q ss_pred             CCCChHHHHHHHHhcCCCCCCC-----------------------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         139 FDLHPMRALFLMSKSGFKPPAL-----------------------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       139 ~~~~~~~~~~~i~~~~~~~~~~-----------------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+.+..+....+......+...                       ......+..+.++|.+||..+|++||++++++.
T Consensus       235 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        235 PGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             CCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            8887766655444321111100                       011345788999999999999999999999999

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.97  E-value=1.5e-30  Score=222.27  Aligned_cols=183  Identities=16%  Similarity=0.134  Sum_probs=147.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+.+|+|. +++....  ..+++..+..++.||+.||+|||++|++|+||+|    ++.++
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~l~-~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~  137 (256)
T cd05113          61 LVQLYGVCTKQRPIYIVTEYMSNGCLL-NYLREHG--KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQG  137 (256)
T ss_pred             eeeEEEEEccCCCcEEEEEcCCCCcHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC
Confidence            467777655    58999999999999 6666533  1689999999999999999999999999999999    77889


Q ss_pred             CEEEecccccccccccccc-ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINK-RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||.++........ .....++..|+|||.+.   ...++.++|+|||||++|+|++ |..||...+.......+
T Consensus       138 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~---~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~  214 (256)
T cd05113         138 CVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLL---YSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKV  214 (256)
T ss_pred             CEEECCCccceecCCCceeecCCCccChhhCCHHHHh---cCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH
Confidence            9999999998765443211 11223456799999985   5568899999999999999998 99999877766665555


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .......    .+...+..+.+++.+||+.+|.+||++.+++.
T Consensus       215 ~~~~~~~----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~  253 (256)
T cd05113         215 SQGLRLY----RPHLASEKVYAIMYSCWHEKAEERPTFQQLLS  253 (256)
T ss_pred             hcCCCCC----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            5433221    12446889999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.97  E-value=1e-30  Score=227.69  Aligned_cols=188  Identities=19%  Similarity=0.197  Sum_probs=141.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC-CC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD-RC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~-~~   71 (302)
                      |+++++.+.    .|+||||+++ +|. ..+.... ...+++..++.++.||+.||+|||++|++||||+|    ++ .+
T Consensus        63 i~~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~  139 (294)
T PLN00009         63 IVRLQDVVHSEKRLYLVFEYLDL-DLK-KHMDSSP-DFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRT  139 (294)
T ss_pred             EeeEEEEEecCCeEEEEEecccc-cHH-HHHHhCC-CCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCC
Confidence            355565554    5899999975 787 4554433 12467888899999999999999999999999999    44 45


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +.+||+|||++..............++..|+|||.+.  ....++.++|+||+||++|+|++|.+||...........+.
T Consensus       140 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~--~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~  217 (294)
T PLN00009        140 NALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILL--GSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIF  217 (294)
T ss_pred             CEEEEcccccccccCCCccccccCceeecccCHHHHh--CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            6799999999976543322233446788999999985  23457889999999999999999999998777666555443


Q ss_pred             hcCCCCCC------------------C------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPA------------------L------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~------------------~------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....+..                  .      .....++..+.+++.+||+.+|++||++.++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        218 RILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             HHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            21111100                  0      012346888999999999999999999999999

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.97  E-value=1.2e-30  Score=231.59  Aligned_cols=156  Identities=19%  Similarity=0.274  Sum_probs=123.9

Q ss_pred             cccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhccc
Q psy3574          35 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAA  108 (302)
Q Consensus        35 ~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~  108 (302)
                      ++++..+..++.||+.||+|||++||+||||||    ++.++.+||+|||++..+.....  ......++..|+|||++.
T Consensus       169 ~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  248 (337)
T cd05054         169 PLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIF  248 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhc
Confidence            578888999999999999999999999999999    77789999999999987643211  122334567899999986


Q ss_pred             ccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC
Q psy3574         109 VERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT  187 (302)
Q Consensus       109 ~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t  187 (302)
                         +..++.++||||+||++|+|++ |..||.+....+............   ..+..++.++.+++.+||+.+|++||+
T Consensus       249 ---~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~RPs  322 (337)
T cd05054         249 ---DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRM---RAPEYATPEIYSIMLDCWHNNPEDRPT  322 (337)
T ss_pred             ---CCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCC---CCCccCCHHHHHHHHHHccCChhhCcC
Confidence               6678999999999999999998 999997655444433333332221   123457889999999999999999999


Q ss_pred             HHHHHHHHH
Q psy3574         188 ADKLLQVIL  196 (302)
Q Consensus       188 ~~~ll~~l~  196 (302)
                      +.++++++-
T Consensus       323 ~~ell~~l~  331 (337)
T cd05054         323 FSELVEILG  331 (337)
T ss_pred             HHHHHHHHH
Confidence            999999553

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.97  E-value=1e-30  Score=227.23  Aligned_cols=187  Identities=22%  Similarity=0.273  Sum_probs=142.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.|.    .|+||||+++++|. +++....   .+++..+..++.|++.||.|||+.|++||||+|    ++.++
T Consensus        67 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~  142 (290)
T cd05613          67 LVTLHYAFQTDTKLHLILDYINGGELF-THLSQRE---RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNG  142 (290)
T ss_pred             hhceeeEeecCCeEEEEEecCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCC
Confidence            344554443    58999999999999 7776665   799999999999999999999999999999999    77889


Q ss_pred             CEEEecccccccccccc-ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATI-NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      .+||+|||++....... .......|+..|+|||.+... ...++.++|+||||+++|+|++|..||...........+.
T Consensus       143 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~  221 (290)
T cd05613         143 HVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGG-DGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEIS  221 (290)
T ss_pred             CEEEeeCccceecccccccccccccCCcccCChhhccCC-CCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHH
Confidence            99999999987654321 122345688999999998521 2346788999999999999999999996433221111111


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~  193 (302)
                      ...... ....+..++..+.+++.+||..+|++|+     ++++++.
T Consensus       222 ~~~~~~-~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         222 RRILKS-EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             HHhhcc-CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence            111000 0112355789999999999999999997     7899999

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.97  E-value=3.1e-30  Score=225.08  Aligned_cols=187  Identities=17%  Similarity=0.174  Sum_probs=145.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc-------------ccccccccchhHHHhhHHHHHHHHHhCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI-------------TAIELAELQPPMFDLHPMRALFLMSKSGFKPP   63 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hr   63 (302)
                      ||++++.+.    .|+|+||+++|+|. +++....             ....+++..++.++.|++.||+|||++||+||
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~  143 (297)
T cd05089          65 IINLLGACENRGYLYIAIEYAPYGNLL-DFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHR  143 (297)
T ss_pred             hhheEEEEccCCcceEEEEecCCCcHH-HHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence            355665443    58999999999999 6665432             01247788999999999999999999999999


Q ss_pred             CCcC----CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCC
Q psy3574          64 ALKD----KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPM  138 (302)
Q Consensus        64 dlkp----~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf  138 (302)
                      ||||    ++.++.+||+|||++....... .......+..|+|||.+.   ...++.++|||||||++|+|++ |..||
T Consensus       144 dlkp~Nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwSlG~il~el~t~g~~pf  219 (297)
T cd05089         144 DLAARNVLVGENLASKIADFGLSRGEEVYV-KKTMGRLPVRWMAIESLN---YSVYTTKSDVWSFGVLLWEIVSLGGTPY  219 (297)
T ss_pred             cCCcceEEECCCCeEEECCcCCCcccccee-ccCCCCcCccccCchhhc---cCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence            9999    7788999999999986433211 111122355799999985   5668899999999999999997 99999


Q ss_pred             CCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         139 FDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       139 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ...........+.... ..   ..+..++..+.+|+.+||..+|.+||++.++++.+.
T Consensus       220 ~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  273 (297)
T cd05089         220 CGMTCAELYEKLPQGY-RM---EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLS  273 (297)
T ss_pred             CCCCHHHHHHHHhcCC-CC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            8887776665554321 11   123567899999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=1.3e-30  Score=225.87  Aligned_cols=181  Identities=25%  Similarity=0.407  Sum_probs=143.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh-CCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK-SGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~i~Hrdlkp----~~~~   71 (302)
                      |+++++.+.    +|+||||+++|+|. .++...+   .+++..++.++.+++.||.|||+ .+++||||+|    ++.+
T Consensus        65 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~  140 (284)
T cd06620          65 IVSFYGAFLNENNICMCMEFMDCGSLD-RIYKKGG---PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSR  140 (284)
T ss_pred             cceEeeeEecCCEEEEEEecCCCCCHH-HHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCC
Confidence            456666555    58999999999998 7777666   79999999999999999999997 5999999999    7888


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-------
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM-------  144 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------  144 (302)
                      +.++|+|||++......  ......|+..|+|||++.   ...++.++|+||+||++|+|++|..||......       
T Consensus       141 ~~~~l~d~gl~~~~~~~--~~~~~~~~~~~~aPE~~~---~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~  215 (284)
T cd06620         141 GQIKLCDFGVSGELINS--IADTFVGTSTYMSPERIQ---GGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDP  215 (284)
T ss_pred             CcEEEccCCcccchhhh--ccCccccCcccCCHHHHc---cCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhh
Confidence            99999999998655332  222457899999999985   556889999999999999999999999764431       


Q ss_pred             ----HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         145 ----RALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       145 ----~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                          .....+....  .+.. ....++..+.+|+.+||+.||.+||++.++++
T Consensus       216 ~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~  265 (284)
T cd06620         216 MGILDLLQQIVQEP--PPRL-PSSDFPEDLRDFVDACLLKDPTERPTPQQLCA  265 (284)
T ss_pred             hHHHHHHHHHhhcc--CCCC-CchhcCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence                1222222211  1111 11236789999999999999999999999999

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.97  E-value=1.5e-30  Score=226.53  Aligned_cols=180  Identities=18%  Similarity=0.190  Sum_probs=141.2

Q ss_pred             chheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccc
Q psy3574           8 FLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSA   83 (302)
Q Consensus         8 ~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~   83 (302)
                      ...|+||||+.+ +|. .++....  ..+++..++.++.||+.||+|||++|++|+||+|    ++.++.+||+|||++.
T Consensus        79 ~~~~lv~e~~~~-~L~-~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~  154 (293)
T cd07843          79 DKIYMVMEYVEH-DLK-SLMETMK--QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAR  154 (293)
T ss_pred             CcEEEEehhcCc-CHH-HHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCcee
Confidence            346899999986 888 6665543  1589999999999999999999999999999999    8888999999999988


Q ss_pred             ccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC------
Q psy3574          84 QITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKP------  157 (302)
Q Consensus        84 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~------  157 (302)
                      .............++..|+|||.+.+  ...++.++|+||+|+++|+|++|.+||...........+......+      
T Consensus       155 ~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  232 (293)
T cd07843         155 EYGSPLKPYTQLVVTLWYRAPELLLG--AKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWP  232 (293)
T ss_pred             eccCCccccccccccccccCchhhcC--CccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHH
Confidence            76654333334567889999999852  2336789999999999999999999998777665554443211000      


Q ss_pred             --------------------CCCCCCCC-CCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         158 --------------------PALKDKDR-WSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       158 --------------------~~~~~~~~-~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                          .....+.. ++..+.++|.+||+.+|++|||+.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         233 GFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             HhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence                                00001112 5888999999999999999999999999

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.97  E-value=2.3e-30  Score=226.56  Aligned_cols=187  Identities=18%  Similarity=0.210  Sum_probs=145.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-------------cccccccchhHHHhhHHHHHHHHHhCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-------------AIELAELQPPMFDLHPMRALFLMSKSGFKPP   63 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hr   63 (302)
                      ||++++.+.    .|+||||+++|+|. +++...+.             ...+++.++..++.||+.||+|||++|++||
T Consensus        70 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~  148 (303)
T cd05088          70 IINLLGACEHRGYLYLAIEYAPHGNLL-DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHR  148 (303)
T ss_pred             cceEEEEECCCCCceEEEEeCCCCcHH-HHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence            456666554    59999999999999 77654321             1247888999999999999999999999999


Q ss_pred             CCcC----CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCC
Q psy3574          64 ALKD----KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPM  138 (302)
Q Consensus        64 dlkp----~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf  138 (302)
                      ||||    ++.++.+||+|||++....... ......++..|+|||.+.   ...++.++|||||||++|+|++ |..||
T Consensus       149 dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~ellt~g~~p~  224 (303)
T cd05088         149 DLAARNILVGENYVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLN---YSVYTTNSDVWSYGVLLWEIVSLGGTPY  224 (303)
T ss_pred             ccchheEEecCCCcEEeCccccCcccchhh-hcccCCCcccccCHHHHh---ccCCcccccchhhhhHHHHHHhcCCCCc
Confidence            9999    8888999999999986432211 111223456799999885   5568899999999999999998 99999


Q ss_pred             CCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         139 FDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       139 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ...+..+....+... .   ....+..++..+.+++.+||+.+|++||++.+++..+.
T Consensus       225 ~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~  278 (303)
T cd05088         225 CGMTCAELYEKLPQG-Y---RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN  278 (303)
T ss_pred             ccCChHHHHHHHhcC-C---cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            877666555444322 1   11123456889999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.97  E-value=2.7e-30  Score=221.47  Aligned_cols=186  Identities=19%  Similarity=0.212  Sum_probs=146.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    +|+||||+++|+|. +++.... ...+++..+..++.|++.||+|||++|++||||+|    ++.++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~  141 (263)
T cd05052          64 LVQLLGVCTREPPFYIITEFMTYGNLL-DYLRECN-RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH  141 (263)
T ss_pred             hhheEEEEcCCCCcEEEEEeCCCCcHH-HHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC
Confidence            355665443    58999999999999 6665432 12588889999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccccc-cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKR-KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||++.......... ....++..|+|||.+.   +..++.++|||||||++|+|++ |..||.+.........+
T Consensus       142 ~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~  218 (263)
T cd05052         142 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL  218 (263)
T ss_pred             cEEeCCCccccccccceeeccCCCCCccccCCHHHhc---cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            99999999987765432111 1223456799999985   6668899999999999999998 99999877666554444


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ... ..+   ..+..++..+.++|.+||..+|++||++.++++.+
T Consensus       219 ~~~-~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l  259 (263)
T cd05052         219 EKG-YRM---ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAF  259 (263)
T ss_pred             HCC-CCC---CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHH
Confidence            332 221   22456789999999999999999999999998843

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.97  E-value=2e-30  Score=227.16  Aligned_cols=178  Identities=17%  Similarity=0.188  Sum_probs=135.6

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+.+ +|. .++....  ..+++.+++.++.||+.||+|||++|++|+||+|    ++.++.+||+|||++...
T Consensus        94 ~~lv~e~~~~-~l~-~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  169 (310)
T cd07865          94 FYLVFEFCEH-DLA-GLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAF  169 (310)
T ss_pred             EEEEEcCCCc-CHH-HHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccc
Confidence            4899999976 777 5554432  2689999999999999999999999999999999    888899999999999766


Q ss_pred             ccccc----cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCC
Q psy3574          86 TATIN----KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK  161 (302)
Q Consensus        86 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  161 (302)
                      .....    ......++..|+|||.+.+  ...++.++|+||+|+++|+|++|..||.+.+.......+.......+...
T Consensus       170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (310)
T cd07865         170 SLSKNSKPNRYTNRVVTLWYRPPELLLG--ERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEV  247 (310)
T ss_pred             cCCcccCCCCccCcccCccccCcHHhcC--CcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence            43221    1123457888999998852  33467899999999999999999999987766554443333111100000


Q ss_pred             ---------------------------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         162 ---------------------------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       162 ---------------------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                                 .....+..+.+||.+||..||.+|||+.++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         248 WPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             cccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence                                       01123567889999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.97  E-value=4.2e-31  Score=226.14  Aligned_cols=185  Identities=21%  Similarity=0.288  Sum_probs=144.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||+++|.+.    .++|+||+++|+|. +++.... ...+++.++..++.||+.||.|||+++++|++|++    ++.++
T Consensus        63 i~~~~g~~~~~~~~~lv~e~~~~g~L~-~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~  140 (259)
T PF07714_consen   63 IVKLYGFCIENEPLFLVMEYCPGGSLD-DYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNG  140 (259)
T ss_dssp             BE-EEEEEESSSSEEEEEE--TTEBHH-HHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTT
T ss_pred             ccccccccccccccccccccccccccc-ccccccc-cccccccccccccccccccccccccccccccccccccccccccc
Confidence            567777776    58999999999999 7777651 12689999999999999999999999999999999    88899


Q ss_pred             CEEEecccccccccccc--ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          73 DVKLADFGVSAQITATI--NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      .+||+|||++.......  .......+...|+|||.+.   ...++.++||||||+++|||++ |+.||.+.+.......
T Consensus       141 ~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~  217 (259)
T PF07714_consen  141 QVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLK---DGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEK  217 (259)
T ss_dssp             EEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHH---HSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccc
Confidence            99999999998763211  1122334677899999985   5558999999999999999999 7899988888777777


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      +......    ..+..++..+.++|.+||..+|++||++.++++.
T Consensus       218 ~~~~~~~----~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~  258 (259)
T PF07714_consen  218 LKQGQRL----PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQE  258 (259)
T ss_dssp             HHTTEET----TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHH
T ss_pred             ccccccc----eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhc
Confidence            6444322    2246689999999999999999999999999873

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=9.4e-31  Score=243.54  Aligned_cols=188  Identities=18%  Similarity=0.156  Sum_probs=134.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc--cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT--AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      ||++++.+.    .|+|+|++.+ +|. .++.....  ........++.++.||+.||.|||++||+||||||    ++.
T Consensus       225 Iv~l~~~~~~~~~~~lv~e~~~~-~l~-~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~  302 (501)
T PHA03210        225 ILKIEEILRSEANTYMITQKYDF-DLY-SFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNC  302 (501)
T ss_pred             cCcEeEEEEECCeeEEEEecccc-CHH-HHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC
Confidence            567776654    5899999966 776 44433210  01233456788999999999999999999999999    888


Q ss_pred             CCCEEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCC-CC--ChHHH
Q psy3574          71 CGDVKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMF-DL--HPMRA  146 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~-~~--~~~~~  146 (302)
                      ++.+||+|||+++.+..... .....+|+..|+|||++.   +..++.++|||||||++|+|++|..++. ..  .....
T Consensus       303 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~  379 (501)
T PHA03210        303 DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILA---GDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ  379 (501)
T ss_pred             CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhc---CCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence            99999999999987654322 223467999999999996   6678999999999999999999876443 22  22222


Q ss_pred             HHHHHhcCC----CCC-----------------------CCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         147 LFLMSKSGF----KPP-----------------------ALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       147 ~~~i~~~~~----~~~-----------------------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +..+.....    ..+                       .......++..+.++|.+||+.||.+|||+.++|.
T Consensus       380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~  453 (501)
T PHA03210        380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA  453 (501)
T ss_pred             HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence            222222100    000                       00011235677888999999999999999999999

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=2.3e-30  Score=223.29  Aligned_cols=185  Identities=18%  Similarity=0.246  Sum_probs=147.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-------cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC--
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-------AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD--   67 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp--   67 (302)
                      |+++++.+.    .|+||||+++|+|. .++.....       ...+++..+..++.|++.||.|||++|++||||+|  
T Consensus        71 i~~~~~~~~~~~~~~~v~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~n  149 (277)
T cd05032          71 VVRLLGVVSTGQPTLVVMELMAKGDLK-SYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARN  149 (277)
T ss_pred             eeEEEEEEcCCCCcEEEEecCCCCCHH-HHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChhe
Confidence            456666554    68999999999999 66654321       11367778899999999999999999999999999  


Q ss_pred             --CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q psy3574          68 --KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLH  142 (302)
Q Consensus        68 --~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~  142 (302)
                        ++.++.+||+|||+++.......  ......++..|+|||.+.   ...++.++|+|||||++|++++ |..||.+..
T Consensus       150 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  226 (277)
T cd05032         150 CMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLK---DGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS  226 (277)
T ss_pred             EEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHh---cCCCCcccchHHHHHHHHHhhccCCCCCccCC
Confidence              88899999999999876543321  122335678899999985   5668899999999999999998 999998877


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         143 PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       143 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .......+.....    ...+..++..+.+++.+||+.+|++|||+.++++
T Consensus       227 ~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         227 NEEVLKFVIDGGH----LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             HHHHHHHHhcCCC----CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            7766665553321    1224556899999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.97  E-value=2.3e-30  Score=223.82  Aligned_cols=186  Identities=22%  Similarity=0.282  Sum_probs=145.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      |+++++.+.    .|+|+||+++ +|. +++.. ..   .+++..+..++.|++.||.|||++||+|+||+|    ++.+
T Consensus        60 i~~~~~~~~~~~~~~~v~e~~~~-~l~-~~l~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~  134 (283)
T cd05118          60 IIKLLDVFRHKGDLYLVFEFMDT-DLY-KLIKDRQR---GLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTE  134 (283)
T ss_pred             cchHHHhhccCCCEEEEEeccCC-CHH-HHHHhhcc---cCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCC
Confidence            456666554    5899999986 887 55554 34   799999999999999999999999999999999    7788


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +.+||+|||.+..............++..|+|||.+.+  ...++.++|+||+|+++|+|++|+.||...+..+....+.
T Consensus       135 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~  212 (283)
T cd05118         135 GVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLG--DKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIF  212 (283)
T ss_pred             CcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhc--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            99999999998776554322333467888999999862  2367899999999999999999999998877666554443


Q ss_pred             hcCCCCCC-------------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPA-------------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~-------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....+..                         ......++.++.+||.+||..||.+||++.+++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         213 RTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             HHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            32111000                         0012246789999999999999999999999999

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.8e-30  Score=219.56  Aligned_cols=173  Identities=31%  Similarity=0.514  Sum_probs=145.9

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+++++|. +++....   .+++..+..++.|++.||.|||++|++||||+|    ++.++.++|+|||.+...
T Consensus        74 ~~~v~e~~~~~~L~-~~~~~~~---~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~  149 (254)
T cd06627          74 LYIILEYAENGSLR-QIIKKFG---PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKL  149 (254)
T ss_pred             EEEEEecCCCCcHH-HHHHhcc---CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceec
Confidence            58999999999999 7777666   799999999999999999999999999999999    777899999999999877


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR  165 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  165 (302)
                      ...........++..|+|||.+.   ...++.++|+|++|+++|+|++|..||..................    ..+..
T Consensus       150 ~~~~~~~~~~~~~~~y~~pe~~~---~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~  222 (254)
T cd06627         150 NDVSKDDASVVGTPYWMAPEVIE---MSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHP----PLPEG  222 (254)
T ss_pred             CCCcccccccccchhhcCHhhhc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCC----CCCCC
Confidence            65433334456889999999985   445789999999999999999999999877655555444432211    22456


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         166 WSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       166 ~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ++..+.+++.+||..+|++||++.+++.
T Consensus       223 ~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         223 ISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             CCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            7899999999999999999999999999

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.97  E-value=2.7e-30  Score=223.57  Aligned_cols=185  Identities=15%  Similarity=0.173  Sum_probs=146.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcccc------------ccccccchhHHHhhHHHHHHHHHhCCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITA------------IELAELQPPMFDLHPMRALFLMSKSGFKPPA   64 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~------------~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrd   64 (302)
                      |+++++.+.    .|+||||+.+|+|. +++......            ..+++..+..++.||+.||+|||++|++|||
T Consensus        69 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~d  147 (280)
T cd05092          69 IVRFYGVCTEGRPLLMVFEYMRHGDLN-RFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRD  147 (280)
T ss_pred             CceEEEEEecCCceEEEEecCCCCCHH-HHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            456666554    58999999999999 666553210            1478889999999999999999999999999


Q ss_pred             CcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCC
Q psy3574          65 LKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPP  137 (302)
Q Consensus        65 lkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~p  137 (302)
                      |||    +++++.+||+|||++........  ......+++.|+|||.+.   +..++.++|+|||||++|+|++ |.+|
T Consensus       148 lkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~el~~~g~~p  224 (280)
T cd05092         148 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL---YRKFTTESDIWSFGVVLWEIFTYGKQP  224 (280)
T ss_pred             ccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhc---cCCcCchhhHHHHHHHHHHHHcCCCCC
Confidence            999    77889999999999875543211  112233567899999985   5668899999999999999998 9999


Q ss_pred             CCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         138 MFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       138 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      |......+....+......    ..+..++..+.++|.+||..||.+||++.+++.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         225 WYQLSNTEAIECITQGREL----ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             CccCCHHHHHHHHHcCccC----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            9877776666555443221    223567899999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.97  E-value=3.3e-30  Score=219.35  Aligned_cols=184  Identities=15%  Similarity=0.145  Sum_probs=144.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++++|. +++....  ..+++..+..++.|++.||.|||++|++||||+|    ++.++
T Consensus        55 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~  131 (252)
T cd05084          55 IVRLIGVCTQKQPIYIVMELVQGGDFL-TFLRTEG--PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKN  131 (252)
T ss_pred             cceEEEEEcCCCCeEEEEeeccCCcHH-HHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCC
Confidence            456665544    58999999999999 7765533  2588999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccccc--cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKR--KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      .+||+|||.+..........  ....++..|+|||.+.   ...++.++|+|||||++|+|++ |..||...........
T Consensus       132 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~  208 (252)
T cd05084         132 VLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALN---YGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREA  208 (252)
T ss_pred             cEEECccccCcccccccccccCCCCCCceeecCchhhc---CCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHH
Confidence            99999999987654321111  0112245699999985   5568899999999999999998 8999977766655544


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      +.... ..   ..+..++..+.+++.+||+.+|++||++.++++.
T Consensus       209 ~~~~~-~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~  249 (252)
T cd05084         209 IEQGV-RL---PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQE  249 (252)
T ss_pred             HHcCC-CC---CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            44322 11   2245678999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.97  E-value=2.8e-30  Score=227.38  Aligned_cols=185  Identities=15%  Similarity=0.132  Sum_probs=146.2

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++++.+.   .++|+||+.+|+|. +++....  ..+++..+..++.||+.||+|||++||+||||||    ++.++.
T Consensus        71 iv~~~g~~~~~~~~~v~e~~~~g~l~-~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~  147 (316)
T cd05108          71 VCRLLGICLTSTVQLITQLMPFGCLL-DYVREHK--DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQH  147 (316)
T ss_pred             CCeEEEEEcCCCceeeeecCCCCCHH-HHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCc
Confidence            466776554   47999999999999 6665432  1588888999999999999999999999999999    888899


Q ss_pred             EEEeccccccccccccccc--cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          74 VKLADFGVSAQITATINKR--KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      +||+|||+++.........  ....++..|+|||.+.   ...++.++|||||||++|+|++ |..||.+....... .+
T Consensus       148 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~---~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~-~~  223 (316)
T cd05108         148 VKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESIL---HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SI  223 (316)
T ss_pred             EEEccccccccccCCCcceeccCCccceeecChHHhc---cCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH-HH
Confidence            9999999998765432221  1223466799999985   6678999999999999999997 99999876655543 33


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .......+   .+..++..+.+++.+||..+|.+||++.+++..+
T Consensus       224 ~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l  265 (316)
T cd05108         224 LEKGERLP---QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEF  265 (316)
T ss_pred             HhCCCCCC---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            33332222   2355788999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.97  E-value=1.2e-30  Score=231.62  Aligned_cols=176  Identities=22%  Similarity=0.277  Sum_probs=136.2

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+|+||+.+ +|. .++..+    .+++..++.++.|++.||+|||++||+||||||    ++.++.+||+|||++...
T Consensus        83 ~~lv~e~~~~-~l~-~~~~~~----~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~  156 (336)
T cd07849          83 VYIVQELMET-DLY-KLIKTQ----HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIA  156 (336)
T ss_pred             EEEEehhccc-CHH-HHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeec
Confidence            5899999976 887 666543    599999999999999999999999999999999    788999999999998765


Q ss_pred             ccccc---cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC-----
Q psy3574          86 TATIN---KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKP-----  157 (302)
Q Consensus        86 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----  157 (302)
                      .....   ......|+..|+|||.+.  ....++.++||||+||++|+|++|+.||.+.+.......+......+     
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~  234 (336)
T cd07849         157 DPEHDHTGFLTEYVATRWYRAPEIML--NSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDL  234 (336)
T ss_pred             cccccccCCcCCcCcCCCccChHHhh--CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence            43211   112346889999999875  23457899999999999999999999997765443333222110000     


Q ss_pred             ------------------CCC---CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         158 ------------------PAL---KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       158 ------------------~~~---~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                        +..   ......+.++.++|.+||+.+|++|||+.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~  291 (336)
T cd07849         235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALA  291 (336)
T ss_pred             HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                              000   011345788999999999999999999999999

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.97  E-value=3.4e-30  Score=219.98  Aligned_cols=182  Identities=15%  Similarity=0.162  Sum_probs=143.7

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.+.    .|+||||++|++|. +++....  ..+++..+..++.|++.||+|||++|++||||+|    ++.++.
T Consensus        62 ~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~  138 (256)
T cd05059          62 VQLYGVCTKQRPIFIVTEYMANGCLL-NYLRERK--GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNV  138 (256)
T ss_pred             EEEEEEEcCCCceEEEEecCCCCCHH-HHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCc
Confidence            45555443    58999999999999 6665432  1688999999999999999999999999999999    788999


Q ss_pred             EEEecccccccccccccc-ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATINK-RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||.++........ .....++..|+|||.+.   +..++.++|+||||+++|+|++ |..||......+....+.
T Consensus       139 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~---~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~  215 (256)
T cd05059         139 VKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFD---YSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVS  215 (256)
T ss_pred             EEECCcccceecccccccccCCCCCCccccCHHHhc---cCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Confidence            999999998765432111 11112345799999985   5668899999999999999999 899998777666655554


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .. ...   ..+..++.++.+++.+||..+|++|||+.++++
T Consensus       216 ~~-~~~---~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~  253 (256)
T cd05059         216 AG-YRL---YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLS  253 (256)
T ss_pred             cC-CcC---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            32 111   123457899999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.97  E-value=2e-30  Score=225.18  Aligned_cols=194  Identities=25%  Similarity=0.273  Sum_probs=148.2

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.|.    .|+||||+.+|+|. ..+....   .+++..++.++.|++.||.|||+.|++||||+|    ++.++.
T Consensus        68 ~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~  143 (288)
T cd05583          68 VTLHYAFQTDTKLHLILDYVNGGELF-THLYQRE---HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGH  143 (288)
T ss_pred             hhhheeeecCCEEEEEEecCCCCcHH-HHHhhcC---CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC
Confidence            45555443    58999999999999 6666555   689999999999999999999999999999999    778899


Q ss_pred             EEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh----HHHHH
Q psy3574          74 VKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHP----MRALF  148 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~  148 (302)
                      ++|+|||++........ ......|+..|+|||.+.+. ....+.++|+||+|+++|+|++|..||.....    .....
T Consensus       144 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~  222 (288)
T cd05583         144 VVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGG-SGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISR  222 (288)
T ss_pred             EEEEECccccccccccccccccccCCccccCHHHhcCC-CCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHH
Confidence            99999999876544322 12234688999999998521 12367899999999999999999999964322    22222


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH---HHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCcccc
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA---DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKY  225 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~---~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~  225 (302)
                      .+.....     ..+..++..+.++|.+||+.+|++|||+   .++++                          ||||+.
T Consensus       223 ~~~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~--------------------------~~~~~~  271 (288)
T cd05583         223 RILKSKP-----PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN--------------------------HPFFQG  271 (288)
T ss_pred             HHHccCC-----CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc--------------------------Cccccc
Confidence            2222211     2235578899999999999999999995   45577                          999987


Q ss_pred             chhhHH
Q psy3574         226 DMSKRV  231 (302)
Q Consensus       226 ~~~~~~  231 (302)
                      ..|...
T Consensus       272 ~~~~~~  277 (288)
T cd05583         272 IDWDDL  277 (288)
T ss_pred             CCHHHH
Confidence            766433

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.97  E-value=3.2e-30  Score=223.29  Aligned_cols=187  Identities=14%  Similarity=0.206  Sum_probs=146.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc--------------cccccccchhHHHhhHHHHHHHHHhCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT--------------AIELAELQPPMFDLHPMRALFLMSKSGFKP   62 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~--------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~H   62 (302)
                      |+++++.+.    .|+||||+.+|+|. +++.....              ...+++..+..++.|++.||.|||++|++|
T Consensus        69 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H  147 (283)
T cd05090          69 IVCLLGVVTQEQPVCMLFEYLNQGDLH-EFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVH  147 (283)
T ss_pred             eeeEEEEEecCCceEEEEEcCCCCcHH-HHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeeh
Confidence            355665544    58999999999999 66643220              124778888999999999999999999999


Q ss_pred             CCCcC----CCCCCCEEEecccccccccccc--ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CC
Q psy3574          63 PALKD----KDRCGDVKLADFGVSAQITATI--NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQ  135 (302)
Q Consensus        63 rdlkp----~~~~~~ikL~DFg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~  135 (302)
                      |||||    ++.++.+||+|||+++......  .......++..|+|||.+.   +..++.++|+|||||++|+|++ |.
T Consensus       148 ~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~~g~  224 (283)
T cd05090         148 KDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIM---YGKFSSDSDIWSFGVVLWEIFSFGL  224 (283)
T ss_pred             hccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhc---cCCCCchhhhHHHHHHHHHHHcCCC
Confidence            99999    7788999999999997654321  1122334567899999985   5568899999999999999998 99


Q ss_pred             CCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         136 PPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       136 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .||.+.........+......    ..+..++..+.+++.+||+.+|.+||++.++++.+
T Consensus       225 ~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l  280 (283)
T cd05090         225 QPYYGFSNQEVIEMVRKRQLL----PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRL  280 (283)
T ss_pred             CCCCCCCHHHHHHHHHcCCcC----CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHh
Confidence            999887666555555443221    23456789999999999999999999999998843

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.97  E-value=2.5e-30  Score=223.37  Aligned_cols=187  Identities=15%  Similarity=0.198  Sum_probs=144.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc----cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT----AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~   68 (302)
                      |+++++.+.    .|+||||++||+|. +++.....    ...+++..+..++.||+.||+|||+++++||||+|    +
T Consensus        71 i~~~~~~~~~~~~~~lv~e~~~g~~L~-~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~  149 (277)
T cd05036          71 IVRLIGVSFERLPRFILLELMAGGDLK-SFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLL  149 (277)
T ss_pred             EeeEEEEEccCCCcEEEEecCCCCCHH-HHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEE
Confidence            456666555    58999999999999 77765431    11478888999999999999999999999999999    4


Q ss_pred             CCC---CCEEEecccccccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q psy3574          69 DRC---GDVKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLH  142 (302)
Q Consensus        69 ~~~---~~ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~  142 (302)
                      +..   ..+||+|||+++........  .....++..|+|||++.   +..++.++|||||||++|+|++ |..||.+..
T Consensus       150 ~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~~g~~pf~~~~  226 (277)
T cd05036         150 TCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFL---DGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT  226 (277)
T ss_pred             eccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHh---cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence            333   46999999999876332111  11223356799999985   5668999999999999999997 999998877


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         143 PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       143 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .......+.....    ...+..++..+.+++.+||+.+|++||++.++++++
T Consensus       227 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l  275 (277)
T cd05036         227 NQEVMEFVTGGGR----LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERI  275 (277)
T ss_pred             HHHHHHHHHcCCc----CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHh
Confidence            6665554443321    122456789999999999999999999999999843

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1.6e-30  Score=231.56  Aligned_cols=173  Identities=20%  Similarity=0.254  Sum_probs=139.5

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+|+||+ +++|. +++...    .+++..++.++.|++.||+|||+.||+||||+|    ++.++.+||+|||++...
T Consensus        95 ~~lv~e~~-~~~L~-~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~  168 (343)
T cd07851          95 VYLVTHLM-GADLN-NIVKCQ----KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHT  168 (343)
T ss_pred             EEEEEecC-CCCHH-HHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccc
Confidence            68999998 55998 777653    599999999999999999999999999999999    778899999999998765


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC------
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPA------  159 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~------  159 (302)
                      ...   .....++..|+|||.+.+  ...++.++||||+||++|+|++|+.||.+.........+......++.      
T Consensus       169 ~~~---~~~~~~~~~y~aPE~~~~--~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  243 (343)
T cd07851         169 DDE---MTGYVATRWYRAPEIMLN--WMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKI  243 (343)
T ss_pred             ccc---ccCCcccccccCHHHHhC--CCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Confidence            432   234567889999999852  235789999999999999999999999877766655554432211110      


Q ss_pred             --------------C------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         160 --------------L------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       160 --------------~------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                    .      .....++..+.+||.+||+.+|++|||+.++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         244 SSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             cchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence                          0      011245889999999999999999999999999

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.97  E-value=4e-30  Score=220.67  Aligned_cols=185  Identities=15%  Similarity=0.155  Sum_probs=147.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++|+|. +++....  ..+++..+..++.|++.||.|||++||+|+||+|    ++.++
T Consensus        67 i~~~~~~~~~~~~~~iv~e~~~~~~L~-~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~  143 (266)
T cd05033          67 IIRLEGVVTKSRPVMIITEYMENGSLD-KFLREND--GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNL  143 (266)
T ss_pred             cceEeEEEecCCceEEEEEcCCCCCHH-HHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC
Confidence            455655443    58999999999999 6665532  1689999999999999999999999999999999    88889


Q ss_pred             CEEEecccccccccccccccc--ccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRK--SFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      .+||+|||++...........  ...++..|+|||.+.   ...++.++|+||||+++|+|++ |..||...........
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~---~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~  220 (266)
T cd05033         144 VCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIA---YRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKA  220 (266)
T ss_pred             CEEECccchhhcccccccceeccCCCCCccccChhhhc---cCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Confidence            999999999987752212111  223456899999985   5668899999999999999998 9999988777666655


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      +......+    .+..++..+.+++.+||+.+|++||++.++++.+
T Consensus       221 ~~~~~~~~----~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l  262 (266)
T cd05033         221 VEDGYRLP----PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTL  262 (266)
T ss_pred             HHcCCCCC----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            55432222    1345789999999999999999999999999844

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.97  E-value=2.5e-30  Score=220.12  Aligned_cols=176  Identities=26%  Similarity=0.397  Sum_probs=145.6

Q ss_pred             heeEEEecCCcchHHHHHHhcc-ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGI-TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      .++|+||+++++|. .++.... .+..+++..+..++.+++.||.|||++|++|+||+|    ++.++.++|+|||.+..
T Consensus        74 ~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~  152 (258)
T cd08215          74 LCIVMEYADGGDLS-QKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKV  152 (258)
T ss_pred             EEEEEEecCCCcHH-HHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceee
Confidence            58999999999999 6665431 112799999999999999999999999999999999    77889999999999987


Q ss_pred             cccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCC
Q psy3574          85 ITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD  164 (302)
Q Consensus        85 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  164 (302)
                      ............|++.|+|||.+.   ...++.++|+||+|+++++|++|..||..................    ..+.
T Consensus       153 ~~~~~~~~~~~~~~~~y~~pe~~~---~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~  225 (258)
T cd08215         153 LSSTVDLAKTVVGTPYYLSPELCQ---NKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYP----PIPS  225 (258)
T ss_pred             cccCcceecceeeeecccChhHhc---cCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCC----CCCC
Confidence            655433334457889999999985   556889999999999999999999999877766655555443322    1234


Q ss_pred             CCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         165 RWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       165 ~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .++..+.+++.+||..+|++||++.++++
T Consensus       226 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         226 QYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            67899999999999999999999999999

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.97  E-value=3.8e-30  Score=222.37  Aligned_cols=175  Identities=15%  Similarity=0.134  Sum_probs=140.3

Q ss_pred             heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      .++++||+++|+|. +++.. ..   .+++..+..++.|++.||+|||++||+||||||    +..++.+||+|||+++.
T Consensus        83 ~~l~~~~~~~g~l~-~~l~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~  158 (279)
T cd05109          83 VQLVTQLMPYGCLL-DYVRENKD---RIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARL  158 (279)
T ss_pred             cEEEEEcCCCCCHH-HHHhhccC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceee
Confidence            57999999999999 66654 33   689999999999999999999999999999999    77788999999999987


Q ss_pred             cccccccc--cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCC
Q psy3574          85 ITATINKR--KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALK  161 (302)
Q Consensus        85 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~  161 (302)
                      ........  ....++..|+|||.+.   ...++.++|||||||++|||++ |..||...........+.. ....+.  
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~--  232 (279)
T cd05109         159 LDIDETEYHADGGKVPIKWMALESIL---HRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK-GERLPQ--  232 (279)
T ss_pred             cccccceeecCCCccchhhCCHHHhc---cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCcCCC--
Confidence            65432211  1123466799999985   5668899999999999999998 8999877666554444433 222221  


Q ss_pred             CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         162 DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       162 ~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                       +..++..+.+++.+||..||++||++.+++..+
T Consensus       233 -~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l  265 (279)
T cd05109         233 -PPICTIDVYMIMVKCWMIDSECRPRFRELVDEF  265 (279)
T ss_pred             -CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence             345788999999999999999999999999744

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.97  E-value=3.4e-30  Score=225.42  Aligned_cols=187  Identities=18%  Similarity=0.235  Sum_probs=147.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+.+|+|. .++.... ...+++.++..++.|++.||.|||+++++|+||+|    ++.++
T Consensus       101 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~  178 (302)
T cd05055         101 IVNLLGACTIGGPILVITEYCCYGDLL-NFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGK  178 (302)
T ss_pred             cceEEEEEecCCceEEEEEcCCCCcHH-HHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCC
Confidence            455665554    58999999999999 6765433 12389999999999999999999999999999999    77888


Q ss_pred             CEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          73 DVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      .+||+|||+++.......  ......++..|+|||.+.   ...++.++||||+||++|+|++ |..||...........
T Consensus       179 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~  255 (302)
T cd05055         179 IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIF---NCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYK  255 (302)
T ss_pred             eEEECCCcccccccCCCceeecCCCCcccccCCHhhhc---cCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHH
Confidence            999999999876543321  112234567899999985   5668899999999999999998 9999987766655555


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .........   .+...+..+.+++.+||..+|++||++.++++.+
T Consensus       256 ~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l  298 (302)
T cd05055         256 LIKEGYRMA---QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLI  298 (302)
T ss_pred             HHHcCCcCC---CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence            544332222   2345688999999999999999999999998843

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.97  E-value=4.2e-30  Score=221.10  Aligned_cols=178  Identities=19%  Similarity=0.182  Sum_probs=141.7

Q ss_pred             heeEEEecCCcchHHHHHHh-cc--ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAV-GI--TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVS   82 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~-~~--~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a   82 (302)
                      .++||||+.+|+|. .++.. ..  ....+++..+..++.|++.||+|||++||+||||||    ++.++.+||+|||++
T Consensus        81 ~~~v~e~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  159 (272)
T cd05075          81 PVVILPFMKHGDLH-SFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS  159 (272)
T ss_pred             cEEEEEeCCCCcHH-HHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence            47999999999999 55432 11  112588999999999999999999999999999999    788899999999999


Q ss_pred             ccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCC
Q psy3574          83 AQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPA  159 (302)
Q Consensus        83 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~  159 (302)
                      +........  .....++..|++||.+.   ...++.++|+|||||++|+|++ |..||.+.........+......   
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---  233 (272)
T cd05075         160 KKIYNGDYYRQGRIAKMPVKWIAIESLA---DRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRL---  233 (272)
T ss_pred             cccCcccceecCCcccCCcccCCHHHcc---CCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC---
Confidence            876543211  11224567899999985   5668899999999999999999 89999877766665555543321   


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         160 LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       160 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                       ..+..++..+.++|.+||..+|++|||+.++++.+
T Consensus       234 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l  268 (272)
T cd05075         234 -KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCEL  268 (272)
T ss_pred             -CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence             12356788999999999999999999999999844

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.97  E-value=3.7e-30  Score=225.23  Aligned_cols=215  Identities=14%  Similarity=0.108  Sum_probs=160.1

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++++.+.   .++++||+++|+|. +++....  ..+++..+..++.|++.||.|||++||+||||||    ++.++.
T Consensus        71 iv~~~~~~~~~~~~~v~e~~~~g~l~-~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~  147 (303)
T cd05110          71 LVRLLGVCLSPTIQLVTQLMPHGCLL-DYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNH  147 (303)
T ss_pred             cccEEEEEcCCCceeeehhcCCCCHH-HHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCc
Confidence            467777554   47999999999999 6665432  1588889999999999999999999999999999    777889


Q ss_pred             EEEecccccccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          74 VKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      +||+|||+++........  .....++..|+|||.+.   +..++.++|||||||++|+|++ |..||.+.........+
T Consensus       148 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~  224 (303)
T cd05110         148 VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH---YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL  224 (303)
T ss_pred             eEEccccccccccCcccccccCCCccccccCCHHHhc---cCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            999999999876543221  11233567899999985   6668899999999999999997 99999876655444333


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHH--HHHhhhCCCCCCccccCCCcccc
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARV--AAVERKGGYNQQCDIWAHPFFKY  225 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~--~~~~~~~~~~~~~~i~~hp~f~~  225 (302)
                      . .....+   .+..++..+.+++.+||..+|++||++.++++.+.......  ...-..+...++.....||||..
T Consensus       225 ~-~~~~~~---~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (303)
T cd05110         225 E-KGERLP---QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQRYLVIQGDDRMKLPSPNDSKFFQN  297 (303)
T ss_pred             H-CCCCCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchhhheeeccCCcCCCCCCchhhHHhc
Confidence            3 322222   23456789999999999999999999999998766432221  12222223445667777888864

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.97  E-value=2.7e-30  Score=218.94  Aligned_cols=175  Identities=41%  Similarity=0.688  Sum_probs=144.4

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+++||++|++|. +++....  ..+++..+..++.|++.||++||++|++|+||+|    ++.++.++|+|||.+...
T Consensus        72 ~~l~~e~~~~~~L~-~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~  148 (253)
T cd05122          72 LWIVMEFCSGGSLK-DLLKSTN--QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQL  148 (253)
T ss_pred             EEEEEecCCCCcHH-HHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccc
Confidence            58999999999999 7776652  2689999999999999999999999999999999    778899999999998776


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR  165 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  165 (302)
                      ..... .....++..|+|||.+.   ...++.++|+||+|+++|+|++|..||...+.......+...  ..+.......
T Consensus       149 ~~~~~-~~~~~~~~~~~~PE~~~---~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~  222 (253)
T cd05122         149 SDTKA-RNTMVGTPYWMAPEVIN---GKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN--GPPGLRNPEK  222 (253)
T ss_pred             ccccc-ccceecCCcccCHHHHc---CCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc--CCCCcCcccc
Confidence            65422 34456889999999985   455788999999999999999999999877555555444432  2223333334


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         166 WSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       166 ~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ++..+.++|.+||..||++|||+.++++
T Consensus       223 ~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         223 WSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            5889999999999999999999999999

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.97  E-value=3.7e-30  Score=219.68  Aligned_cols=174  Identities=17%  Similarity=0.167  Sum_probs=141.2

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+++|+|. +++.... ...+++..+..++.|++.||+|||++|++||||+|    ++.++.+||+|||++...
T Consensus        75 ~~lv~e~~~~~~L~-~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~  152 (256)
T cd05082          75 LYIVTEYMAKGSLV-DYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA  152 (256)
T ss_pred             eEEEEECCCCCcHH-HHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceec
Confidence            58999999999999 6666543 12478899999999999999999999999999999    788999999999998765


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKDKD  164 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  164 (302)
                      ....   ....++..|+|||++.   ...++.++|||||||++|+|++ |+.||...........+.... .+   ..+.
T Consensus       153 ~~~~---~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~---~~~~  222 (256)
T cd05082         153 SSTQ---DTGKLPVKWTAPEALR---EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY-KM---DAPD  222 (256)
T ss_pred             cccC---CCCccceeecCHHHHc---cCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-CC---CCCC
Confidence            4321   2234566899999985   5668899999999999999997 999998776666555544321 11   1235


Q ss_pred             CCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         165 RWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       165 ~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .++..+.+++.+||..+|++|||+.++++.+
T Consensus       223 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l  253 (256)
T cd05082         223 GCPPVVYDVMKQCWHLDAATRPSFLQLREQL  253 (256)
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence            6789999999999999999999999998743

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.97  E-value=2.7e-30  Score=224.83  Aligned_cols=187  Identities=17%  Similarity=0.217  Sum_probs=146.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc-------------ccccccccchhHHHhhHHHHHHHHHhCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI-------------TAIELAELQPPMFDLHPMRALFLMSKSGFKPP   63 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hr   63 (302)
                      |+++++.+.    .|+||||+++|+|. .++....             ....+++..+..++.|++.||+|||++||+||
T Consensus        78 i~~~~~~~~~~~~~~li~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~  156 (293)
T cd05053          78 IINLLGVCTQEGPLYVVVEYAAHGNLR-DFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHR  156 (293)
T ss_pred             eeeEEEEEcCCCCeEEEEEeCCCCcHH-HHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence            355555444    58999999999999 7775421             12368888999999999999999999999999


Q ss_pred             CCcC----CCCCCCEEEecccccccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCC
Q psy3574          64 ALKD----KDRCGDVKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQP  136 (302)
Q Consensus        64 dlkp----~~~~~~ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~  136 (302)
                      ||||    ++.++.+||+|||+++........  .....++..|+|||++.   ...++.++|||||||++|+|++ |..
T Consensus       157 dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~el~~~g~~  233 (293)
T cd05053         157 DLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALF---DRVYTHQSDVWSFGVLLWEIFTLGGS  233 (293)
T ss_pred             ccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhc---cCCcCcccceeehhhHHHHHhcCCCC
Confidence            9999    788999999999999866542211  11223456799999985   5668899999999999999997 999


Q ss_pred             CCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         137 PMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       137 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ||......+....+.... ..   ..+..++..+.+|+.+||..+|++|||+.++++.+
T Consensus       234 p~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l  288 (293)
T cd05053         234 PYPGIPVEELFKLLKEGY-RM---EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDL  288 (293)
T ss_pred             CCCCCCHHHHHHHHHcCC-cC---CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence            998777666555544332 11   22356688999999999999999999999999843

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG1006|consensus

Probab=99.97  E-value=8.4e-32  Score=218.87  Aligned_cols=187  Identities=24%  Similarity=0.371  Sum_probs=151.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhc--cccccccccchhHHHhhHHHHHHHHHhC-CCCCCCCcC----CC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVG--ITAIELAELQPPMFDLHPMRALFLMSKS-GFKPPALKD----KD   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~--~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp----~~   69 (302)
                      ||||||..|    .||.||+|.- +|. .+++.-  .++..++|+.+.+|....+.||.||... .|+|||+||    ++
T Consensus       125 IVkfyGa~F~EGdcWiCMELMd~-SlD-klYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILld  202 (361)
T KOG1006|consen  125 IVKFYGALFSEGDCWICMELMDI-SLD-KLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLD  202 (361)
T ss_pred             HHHHhhhhhcCCceeeeHHHHhh-hHH-HHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEe
Confidence            799999988    4999999976 776 555431  1223699999999999999999999976 899999999    89


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHP-MRALF  148 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~  148 (302)
                      ..|.|||||||.+..+.++... +.-.|...|||||-+... ..+|+.++|+||||++|||+.||..||..-+. .+.+.
T Consensus       203 r~G~vKLCDFGIcGqLv~SiAk-T~daGCrpYmAPERi~p~-~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~  280 (361)
T KOG1006|consen  203 RHGDVKLCDFGICGQLVDSIAK-TVDAGCRPYMAPERIDPS-DKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLC  280 (361)
T ss_pred             cCCCEeeecccchHhHHHHHHh-hhccCCccccChhccCCc-cCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHH
Confidence            9999999999999888775433 234689999999999755 44799999999999999999999999976443 33444


Q ss_pred             HHHhcCCCCCCCCCCC---CCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKD---RWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~---~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+..+  .+|.+....   +++..+..||..||.+|...||...++++
T Consensus       281 ~Vv~g--dpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  281 QVVIG--DPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             HHHcC--CCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence            44443  344443333   48999999999999999999999999999

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.97  E-value=1.7e-30  Score=229.88  Aligned_cols=190  Identities=23%  Similarity=0.302  Sum_probs=141.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    .|+|+||+.+|+|. .++.+.. ...+++..++.++.|++.||+|||++|++||||||    ++.++
T Consensus        61 iv~~~~~~~~~~~~~~v~e~~~~~~l~-~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~  138 (328)
T cd08226          61 IMTSWTVFTTGSWLWVISPFMAYGSAN-SLLKTYF-PEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDG  138 (328)
T ss_pred             cceEeeeEecCCceEEEEecccCCCHH-HHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCC
Confidence            567777765    58999999999999 7776543 12588999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccccc-------cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          73 DVKLADFGVSAQITATINKR-------KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                      .+|++||+.+..........       ....++..|+|||++.+. ...++.++|+||+||++|+|++|+.||.......
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~  217 (328)
T cd08226         139 LVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQD-LYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ  217 (328)
T ss_pred             cEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH
Confidence            99999998654332211110       112345679999998521 2447899999999999999999999998766544


Q ss_pred             HHHHHHhcCCCCC------------------------------------------CCCCCCCCCHHHHHHHHHhhhcCCC
Q psy3574         146 ALFLMSKSGFKPP------------------------------------------ALKDKDRWSSTFHNFVKIALTKNPK  183 (302)
Q Consensus       146 ~~~~i~~~~~~~~------------------------------------------~~~~~~~~s~~~~~li~~~L~~dp~  183 (302)
                      ....+.......+                                          .......++..+.+||++||..||+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~  297 (328)
T cd08226         218 MLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPE  297 (328)
T ss_pred             HHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcc
Confidence            4433322111000                                          0001123567899999999999999


Q ss_pred             CCCCHHHHHH
Q psy3574         184 KRPTADKLLQ  193 (302)
Q Consensus       184 ~R~t~~~ll~  193 (302)
                      +|||+.++++
T Consensus       298 ~Rpta~e~l~  307 (328)
T cd08226         298 KRPSASSLLS  307 (328)
T ss_pred             cCCCHHHHhh
Confidence            9999999999

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.97  E-value=4.4e-30  Score=219.74  Aligned_cols=177  Identities=17%  Similarity=0.232  Sum_probs=142.4

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+++|+|. +++.... ...+++..+..++.|++.||+|||++|++||||+|    ++.++.+||+|||++...
T Consensus        76 ~~lv~e~~~~~~L~-~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~  153 (261)
T cd05072          76 IYIITEYMAKGSLL-DFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVI  153 (261)
T ss_pred             cEEEEecCCCCcHH-HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceec
Confidence            58999999999999 6665432 12578888999999999999999999999999999    888899999999999876


Q ss_pred             cccccc-ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCC
Q psy3574          86 TATINK-RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKDK  163 (302)
Q Consensus        86 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  163 (302)
                      ...... .....++..|+|||.+.   ...++.++|+|||||++|+|++ |..||...........+.... ..+   ..
T Consensus       154 ~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-~~~---~~  226 (261)
T cd05072         154 EDNEYTAREGAKFPIKWTAPEAIN---FGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY-RMP---RM  226 (261)
T ss_pred             CCCceeccCCCccceecCCHHHhc---cCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC-CCC---CC
Confidence            543211 12234567899999985   5567889999999999999998 999998877666665554432 222   23


Q ss_pred             CCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         164 DRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       164 ~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ..++.++.+++.+||..+|++||+++++++.+
T Consensus       227 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l  258 (261)
T cd05072         227 ENCPDELYDIMKTCWKEKAEERPTFDYLQSVL  258 (261)
T ss_pred             CCCCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence            45789999999999999999999999998743

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.97  E-value=3e-30  Score=226.14  Aligned_cols=178  Identities=19%  Similarity=0.254  Sum_probs=136.9

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+|+||+.+ +|...+.....   .+++..++.++.|++.||+|||++|++||||+|    ++.++.+||+|||++...
T Consensus        90 ~~lv~~~~~~-~l~~~~~~~~~---~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  165 (311)
T cd07866          90 VYMVTPYMDH-DLSGLLENPSV---KLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPY  165 (311)
T ss_pred             EEEEEecCCc-CHHHHHhcccc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence            5899999976 66623333333   699999999999999999999999999999999    888999999999998765


Q ss_pred             ccccc-----------cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC
Q psy3574          86 TATIN-----------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG  154 (302)
Q Consensus        86 ~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~  154 (302)
                      .....           ......+++.|+|||.+.  ....++.++||||+||++|+|++|++||.+.+.......+....
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~  243 (311)
T cd07866         166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLL--GERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC  243 (311)
T ss_pred             cCCCcccccCCcccccccccceeccCcCChHHhh--CCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            43211           112235678899999985  23457889999999999999999999998877666555544321


Q ss_pred             CCCCC--C-----------------------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         155 FKPPA--L-----------------------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       155 ~~~~~--~-----------------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+..  .                       .....++..+.+||.+||+.+|.+|||+.+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            11100  0                       001234578899999999999999999999999

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.97  E-value=5.1e-30  Score=225.46  Aligned_cols=189  Identities=16%  Similarity=0.180  Sum_probs=148.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-------------cccccccchhHHHhhHHHHHHHHHhCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-------------AIELAELQPPMFDLHPMRALFLMSKSGFKPP   63 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hr   63 (302)
                      ||++++.+.    +|+||||+.+|+|. .++.....             ...+++..+..++.||+.||.|||++|++||
T Consensus        80 iv~~~~~~~~~~~~~lv~e~~~~g~L~-~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~  158 (314)
T cd05099          80 IINLLGVCTQEGPLYVIVEYAAKGNLR-EFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHR  158 (314)
T ss_pred             eeeEEEEEccCCceEEEEecCCCCcHH-HHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence            456666554    68999999999999 66654320             1247778889999999999999999999999


Q ss_pred             CCcC----CCCCCCEEEeccccccccccccccc--cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCC
Q psy3574          64 ALKD----KDRCGDVKLADFGVSAQITATINKR--KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQP  136 (302)
Q Consensus        64 dlkp----~~~~~~ikL~DFg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~  136 (302)
                      ||||    ++.++.+||+|||.++.........  ....++..|+|||++.   ...++.++|||||||++|+|++ |..
T Consensus       159 dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~el~~~g~~  235 (314)
T cd05099         159 DLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALF---DRVYTHQSDVWSFGILMWEIFTLGGS  235 (314)
T ss_pred             cccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHc---cCCcCccchhhHHHHHHHHHHhCCCC
Confidence            9999    7888999999999997664321111  1122446799999985   5668899999999999999999 899


Q ss_pred             CCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q psy3574         137 PMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILI  197 (302)
Q Consensus       137 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~  197 (302)
                      ||.+.........+.....    ...+..++.++.+++.+||..+|++||++.++++.+..
T Consensus       236 p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~  292 (314)
T cd05099         236 PYPGIPVEELFKLLREGHR----MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDK  292 (314)
T ss_pred             CCCCCCHHHHHHHHHcCCC----CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence            9988777666655544321    12235678899999999999999999999999986653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0666|consensus

Probab=99.97  E-value=9.4e-31  Score=217.08  Aligned_cols=180  Identities=19%  Similarity=0.192  Sum_probs=139.5

Q ss_pred             heeEEEecCCcchHHHHHHhccc--cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC--------CCCCCCEEEecc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGIT--AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD--------KDRCGDVKLADF   79 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp--------~~~~~~ikL~DF   79 (302)
                      +|+++||.+. +|. ++++....  .+.++...++.|+.||+.|+.|||++-|+|||+||        -...|.|||+||
T Consensus       103 v~l~fdYAEh-DL~-~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl  180 (438)
T KOG0666|consen  103 VWLLFDYAEH-DLW-HIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL  180 (438)
T ss_pred             EEEEehhhhh-hHH-HHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence            5899999998 998 88865422  24689999999999999999999999999999999        234599999999


Q ss_pred             ccccccccccccc---cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---------hHHHH
Q psy3574          80 GVSAQITATINKR---KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH---------PMRAL  147 (302)
Q Consensus        80 g~a~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---------~~~~~  147 (302)
                      |+++.+.+.....   ...+-|.+|.|||.+.+  ...|+.++|+||+|||+.||++-.+.|.+..         ..+.+
T Consensus       181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLG--a~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl  258 (438)
T KOG0666|consen  181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLG--ARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL  258 (438)
T ss_pred             cHHHHhhccccccccCCceEEEEEecChHHhcc--cccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence            9999887754332   34567999999999984  4569999999999999999999999887542         22333


Q ss_pred             HHHHhcCCCCCCC--C----C--------------------------CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         148 FLMSKSGFKPPAL--K----D--------------------------KDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~~~~~--~----~--------------------------~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+|......|...  +    .                          ...-++.+.+|+.+||+.||.+|+|++++|+
T Consensus       259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle  336 (438)
T KOG0666|consen  259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE  336 (438)
T ss_pred             HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence            3444322111110  0    0                          0012455899999999999999999999999

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.97  E-value=5.5e-30  Score=221.77  Aligned_cols=187  Identities=12%  Similarity=0.128  Sum_probs=147.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc-------------ccccccccchhHHHhhHHHHHHHHHhCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI-------------TAIELAELQPPMFDLHPMRALFLMSKSGFKPP   63 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hr   63 (302)
                      ||++++.+.    .++++||+.+++|. .++....             ....+++..+..++.|++.||.|||++||+||
T Consensus        70 iv~~~~~~~~~~~~~~~~e~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~  148 (283)
T cd05091          70 IVCLLGVVTKEQPLSMIFSYCSHSDLH-EFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHK  148 (283)
T ss_pred             cCeEEEEEcCCCceEEEEEcCCCCcHH-HHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence            456666543    58999999999999 6664321             01247777889999999999999999999999


Q ss_pred             CCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCC
Q psy3574          64 ALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQP  136 (302)
Q Consensus        64 dlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~  136 (302)
                      ||||    ++.++.+||+|||+++.......  ......+++.|+|||.+.   ...++.++|||||||++|+|++ |..
T Consensus       149 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~~g~~  225 (283)
T cd05091         149 DLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIM---YGKFSIDSDIWSYGVVLWEVFSYGLQ  225 (283)
T ss_pred             ccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHh---cCCCCcchhHHHHHHHHHHHHcCCCC
Confidence            9999    77888999999999876543211  122334577899999985   5568899999999999999998 888


Q ss_pred             CCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         137 PMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       137 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ||.+....+....+......    ..+..++..+.+++.+||+.+|.+||++.+++..+
T Consensus       226 p~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l  280 (283)
T cd05091         226 PYCGYSNQDVIEMIRNRQVL----PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRL  280 (283)
T ss_pred             CCCCCCHHHHHHHHHcCCcC----CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHh
Confidence            99887777766666654332    22456789999999999999999999999998844

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.97  E-value=6.7e-30  Score=218.01  Aligned_cols=185  Identities=18%  Similarity=0.229  Sum_probs=148.1

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++++.+.   .++||||+++|+|. ..+..... ..+++..++.++.|++.||.|||++|++||||+|    ++.++.
T Consensus        58 iv~~~~~~~~~~~~~v~e~~~~~~L~-~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~  135 (257)
T cd05040          58 LIRLYGVVLTHPLMMVTELAPLGSLL-DRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDK  135 (257)
T ss_pred             ccceeEEEcCCeEEEEEEecCCCcHH-HHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCE
Confidence            455555543   58999999999999 55554321 2688999999999999999999999999999999    778899


Q ss_pred             EEEecccccccccccccc---ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          74 VKLADFGVSAQITATINK---RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      +||+|||++.........   .....++..|+|||.+.   ...++.++|+|||||++|+|++ |..||...+..+....
T Consensus       136 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~---~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~  212 (257)
T cd05040         136 VKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLR---TRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKK  212 (257)
T ss_pred             EEeccccccccccccccceecccCCCCCceecCHHHhc---ccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            999999999876542111   11234677899999985   5668899999999999999998 9999988777776666


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +......   ...+..++..+.+++.+||+.+|++||++.++++
T Consensus       213 ~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         213 IDKEGER---LERPEACPQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             HHhcCCc---CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence            5543222   2234557899999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.97  E-value=3.8e-30  Score=221.38  Aligned_cols=186  Identities=18%  Similarity=0.199  Sum_probs=143.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc-------------ccccccccchhHHHhhHHHHHHHHHhCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI-------------TAIELAELQPPMFDLHPMRALFLMSKSGFKPP   63 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hr   63 (302)
                      |+++++.+.    .|+||||+++|+|. +++....             ....+++.+++.++.|++.||+|||++|++||
T Consensus        58 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~  136 (270)
T cd05047          58 IINLLGACEHRGYLYLAIEYAPHGNLL-DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHR  136 (270)
T ss_pred             eeeEEEEEecCCCceEEEEeCCCCcHH-HHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence            355665444    58999999999999 6665432             01247788999999999999999999999999


Q ss_pred             CCcC----CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCC
Q psy3574          64 ALKD----KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPM  138 (302)
Q Consensus        64 dlkp----~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf  138 (302)
                      ||||    ++.++.+||+|||++....... .......+..|+|||++.   ...++.++|+|||||++|+|++ |..||
T Consensus       137 dikp~nili~~~~~~kl~dfgl~~~~~~~~-~~~~~~~~~~y~apE~~~---~~~~~~~~Di~slG~il~el~~~g~~pf  212 (270)
T cd05047         137 DLAARNILVGENYVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLN---YSVYTTNSDVWSYGVLLWEIVSLGGTPY  212 (270)
T ss_pred             ccccceEEEcCCCeEEECCCCCccccchhh-hccCCCCccccCChHHHc---cCCCCchhhHHHHHHHHHHHHcCCCCCc
Confidence            9999    7889999999999986432211 111123356799999985   5668899999999999999997 99999


Q ss_pred             CCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         139 FDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       139 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .+.+.......+.... ..   ..+..++.++.+++.+||..+|.+||++.++++.+
T Consensus       213 ~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l  265 (270)
T cd05047         213 CGMTCAELYEKLPQGY-RL---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL  265 (270)
T ss_pred             cccCHHHHHHHHhCCC-CC---CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHH
Confidence            8776665554443321 11   12345688999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.97  E-value=6e-30  Score=219.54  Aligned_cols=187  Identities=23%  Similarity=0.384  Sum_probs=145.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhc-cccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      |+++++.+.    .|+||||++|++|. +++... .....+++..++.++.||+.||.|||++|++|+||+|    ++.+
T Consensus        64 i~~~~~~~~~~~~~~~v~e~~~~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~  142 (267)
T cd08229          64 VIKYYASFIEDNELNIVLELADAGDLS-RMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT  142 (267)
T ss_pred             hhhhhheeEeCCeEEEEEEecCCCCHH-HHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC
Confidence            456666554    58999999999999 666532 1123689999999999999999999999999999999    7788


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH--HHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM--RALFL  149 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~  149 (302)
                      +.++|+|||.+..............++..|+|||.+.   ...++.++|+||+|+++|+|++|..||.+....  .....
T Consensus       143 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~  219 (267)
T cd08229         143 GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK  219 (267)
T ss_pred             CCEEECcchhhhccccCCcccccccCCcCccCHHHhc---CCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhh
Confidence            9999999999876654333334457889999999985   566888999999999999999999999754332  22222


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      +..... ++.  ....++..+.++|.+||..+|++|||+.++++.
T Consensus       220 ~~~~~~-~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~  261 (267)
T cd08229         220 IEQCDY-PPL--PSDHYSEELRQLVNMCINPDPEKRPDITYVYDV  261 (267)
T ss_pred             hhcCCC-CCC--CcccccHHHHHHHHHhcCCCcccCCCHHHHHHH
Confidence            222211 111  124578899999999999999999999988873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.97  E-value=6.2e-30  Score=224.20  Aligned_cols=187  Identities=16%  Similarity=0.175  Sum_probs=144.8

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccc-------------cccccccchhHHHhhHHHHHHHHHhCCCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-------------AIELAELQPPMFDLHPMRALFLMSKSGFKPPA   64 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrd   64 (302)
                      +++++.+.    .|+||||+.+|+|. +++.....             ...+++.++..++.|++.||+|||++|++|||
T Consensus        87 ~~~~~~~~~~~~~~lv~e~~~~~~L~-~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~d  165 (307)
T cd05098          87 INLLGACTQDGPLYVIVEYASKGNLR-EYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRD  165 (307)
T ss_pred             eeEEEEEecCCceEEEEecCCCCcHH-HHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            45555433    58999999999999 77765321             11477788999999999999999999999999


Q ss_pred             CcC----CCCCCCEEEeccccccccccccccc--cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCC
Q psy3574          65 LKD----KDRCGDVKLADFGVSAQITATINKR--KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPP  137 (302)
Q Consensus        65 lkp----~~~~~~ikL~DFg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~p  137 (302)
                      |||    ++.++.+||+|||.+..........  ....++..|+|||++.   +..++.++|+|||||++|+|++ |..|
T Consensus       166 lkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~~~g~~p  242 (307)
T cd05098         166 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF---DRIYTHQSDVWSFGVLLWEIFTLGGSP  242 (307)
T ss_pred             ccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhc---cCCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence            999    7788999999999987654321111  1122456899999985   5668899999999999999998 8899


Q ss_pred             CCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         138 MFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       138 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      |.+.+.......+.... ..   ..+..++.++.+++.+||..+|.+||++.++++.+.
T Consensus       243 ~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~  297 (307)
T cd05098         243 YPGVPVEELFKLLKEGH-RM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD  297 (307)
T ss_pred             CCcCCHHHHHHHHHcCC-CC---CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence            87766655554444332 11   224567899999999999999999999999998664

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.97  E-value=5.2e-30  Score=219.91  Aligned_cols=188  Identities=21%  Similarity=0.362  Sum_probs=145.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc-ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI-TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      |+++++.+.    .|+|+||+++|+|. .++.... ....+++..+..++.|++.||+|||++|++|+||+|    ++.+
T Consensus        64 i~~~~~~~~~~~~~~~v~e~~~~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~  142 (267)
T cd08228          64 VIKYLDSFIEDNELNIVLELADAGDLS-QMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITAT  142 (267)
T ss_pred             eeeeeeeEEECCeEEEEEEecCCCcHH-HHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCC
Confidence            355666554    58999999999998 6664321 112588899999999999999999999999999999    8888


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHP--MRALFL  149 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~  149 (302)
                      +.++|+|||++..............|+..|+|||.+.   +..++.++|+||+|+++|+|++|..||.....  ......
T Consensus       143 ~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~  219 (267)
T cd08228         143 GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQK  219 (267)
T ss_pred             CCEEECccccceeccchhHHHhcCCCCccccChhhhc---cCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHH
Confidence            9999999999887654333333456888999999986   55678999999999999999999999865432  233333


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      +.... .++.  ....++..+.++|.+||..+|++||++.++++.+
T Consensus       220 ~~~~~-~~~~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~  262 (267)
T cd08228         220 IEQCD-YPPL--PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIA  262 (267)
T ss_pred             HhcCC-CCCC--ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHH
Confidence            32222 2221  1234678999999999999999999999999844

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.97  E-value=6e-30  Score=217.70  Aligned_cols=176  Identities=33%  Similarity=0.482  Sum_probs=144.2

Q ss_pred             chheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccc
Q psy3574           8 FLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSA   83 (302)
Q Consensus         8 ~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~   83 (302)
                      ...++|+||+++++|. +++....   .+++..+..++.|++.||+|||+.|++|+|++|    ++.++.++|+|||.+.
T Consensus        74 ~~~~lv~e~~~~~~L~-~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~  149 (260)
T cd06606          74 NTLNIFLEYVSGGSLS-SLLKKFG---KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAK  149 (260)
T ss_pred             CeEEEEEEecCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEE
Confidence            3468999999999999 8887765   799999999999999999999999999999999    7778999999999988


Q ss_pred             ccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhcCCCCCCC
Q psy3574          84 QITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH-PMRALFLMSKSGFKPPAL  160 (302)
Q Consensus        84 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~~~~~  160 (302)
                      .......  ......++..|+|||.+.   ...++.++|+||||+++|+|++|..||.... .......+...   ....
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~~pE~~~---~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~  223 (260)
T cd06606         150 RLGDIETGEGTGSVRGTPYWMAPEVIR---GEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSS---GEPP  223 (260)
T ss_pred             ecccccccccccCCCCCccccCHhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhcccc---CCCc
Confidence            7765432  133456888999999985   5558899999999999999999999997765 22222222221   1122


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         161 KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       161 ~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+..++..+.++|.+||..+|.+||++.++++
T Consensus       224 ~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         224 EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            234566899999999999999999999999999

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.97  E-value=7.4e-30  Score=223.89  Aligned_cols=173  Identities=34%  Similarity=0.605  Sum_probs=139.5

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+.| +|. +++....  .++++..+..++.|++.||.|||+++++||||+|    ++.++.+||+|||++...
T Consensus        90 ~~lv~e~~~~-~l~-~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  165 (308)
T cd06634          90 AWLVMEYCLG-SAS-DLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM  165 (308)
T ss_pred             eEEEEEccCC-CHH-HHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceee
Confidence            5899999975 777 5554322  2689999999999999999999999999999999    778899999999998765


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR  165 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  165 (302)
                      ...    ....++..|+|||.+.+.....++.++|||||||++|+|++|..||...+.......+........   ....
T Consensus       166 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~  238 (308)
T cd06634         166 APA----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL---QSGH  238 (308)
T ss_pred             cCc----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCc---Cccc
Confidence            432    234688899999998532234578899999999999999999999988776665555554332111   1245


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         166 WSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       166 ~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ++..+.++|.+||..+|.+||++.++++
T Consensus       239 ~~~~~~~li~~cl~~~P~~Rp~~~~ll~  266 (308)
T cd06634         239 WSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (308)
T ss_pred             ccHHHHHHHHHHhhCCcccCCCHHHHhh
Confidence            7889999999999999999999999999

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=6.8e-30  Score=219.07  Aligned_cols=173  Identities=29%  Similarity=0.464  Sum_probs=142.5

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      +++|+||+++++|. +++...+   .+++..+..++.|++.||.|||++|++|+||+|    ++.++.++|+|||+++..
T Consensus        81 ~~~v~e~~~~~~L~-~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~  156 (264)
T cd06653          81 LSIFVEYMPGGSIK-DQLKAYG---ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRI  156 (264)
T ss_pred             EEEEEEeCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence            57999999999999 7776655   689999999999999999999999999999999    778899999999999765


Q ss_pred             cccc---ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCC
Q psy3574          86 TATI---NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD  162 (302)
Q Consensus        86 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  162 (302)
                      ....   .......++..|+|||.+.   +..++.++|+|||||++|+|++|+.||...........+....   .....
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~  230 (264)
T cd06653         157 QTICMSGTGIKSVTGTPYWMSPEVIS---GEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQP---TKPML  230 (264)
T ss_pred             ccccccCccccccCCcccccCHhhhc---CCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCC---CCCCC
Confidence            4311   1122356889999999986   5567899999999999999999999998776666555443322   22233


Q ss_pred             CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         163 KDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       163 ~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +..++..+.++|.+||+ +|..||++.+++.
T Consensus       231 p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         231 PDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             CcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            56789999999999999 5799999999999

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.97  E-value=4.2e-30  Score=219.66  Aligned_cols=178  Identities=14%  Similarity=0.161  Sum_probs=137.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .++||||+.+|+|. .++..+.  ..+++..+..++.||+.||+|||++||+||||||    ++.++
T Consensus        61 iv~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~  137 (258)
T cd05078          61 LVLNYGVCVCGDESIMVQEYVKFGSLD-TYLKKNK--NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREE  137 (258)
T ss_pred             hhheeeEEEeCCCcEEEEecCCCCcHH-HHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEeccc
Confidence            466777654    58999999999999 7776543  1588899999999999999999999999999999    33333


Q ss_pred             --------CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCC-CCCCCCCh
Q psy3574          73 --------DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQ-PPMFDLHP  143 (302)
Q Consensus        73 --------~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~-~pf~~~~~  143 (302)
                              .++++|||++......    ....++..|+|||++.  ....++.++|+||+||++|+|++|. .||.....
T Consensus       138 ~~~~~~~~~~~l~d~g~~~~~~~~----~~~~~~~~y~aPE~~~--~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~  211 (258)
T cd05078         138 DRKTGNPPFIKLSDPGISITVLPK----EILLERIPWVPPECIE--NPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS  211 (258)
T ss_pred             ccccCCCceEEecccccccccCCc----hhccccCCccCchhcc--CCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH
Confidence                    4799999998655432    2346788999999985  2345788999999999999999984 66665555


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         144 MRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       144 ~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....... .....     .+...+.++.++|.+||+.+|++|||++++++
T Consensus       212 ~~~~~~~-~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  255 (258)
T cd05078         212 QKKLQFY-EDRHQ-----LPAPKWTELANLINQCMDYEPDFRPSFRAIIR  255 (258)
T ss_pred             HHHHHHH-Hcccc-----CCCCCcHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            4433222 22111     22345688999999999999999999999988

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.97  E-value=7.9e-30  Score=218.53  Aligned_cols=186  Identities=18%  Similarity=0.226  Sum_probs=145.8

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      |+++++.+.   .|+||||+++|+|. +++.... ...+++..+..++.|++.||+|||++|++||||+|    ++.++.
T Consensus        63 i~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~  140 (262)
T cd05071          63 LVQLYAVVSEEPIYIVTEYMSKGSLL-DFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV  140 (262)
T ss_pred             cceEEEEECCCCcEEEEEcCCCCcHH-HHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCc
Confidence            345554433   58999999999999 6665432 12578899999999999999999999999999999    778899


Q ss_pred             EEEecccccccccccccc-ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATINK-RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||.+......... .....++..|+|||.+.   ...++.++|+|||||++|+|++ |..||.+.........+.
T Consensus       141 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~  217 (262)
T cd05071         141 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL---YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE  217 (262)
T ss_pred             EEeccCCceeeccccccccccCCcccceecCHhHhc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHh
Confidence            999999999765433211 11234567899999985   5668999999999999999999 888998877666655554


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ... ..+   ....++..+.+++.+||+.+|++||++.++++.+
T Consensus       218 ~~~-~~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l  257 (262)
T cd05071         218 RGY-RMP---CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL  257 (262)
T ss_pred             cCC-CCC---CccccCHHHHHHHHHHccCCcccCCCHHHHHHHH
Confidence            332 111   1345788999999999999999999999998743

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG0671|consensus

Probab=99.97  E-value=1.9e-31  Score=226.52  Aligned_cols=183  Identities=18%  Similarity=0.234  Sum_probs=140.8

Q ss_pred             chhhhcchh----eeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----------
Q psy3574           2 SRVFNHFLQ----VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----------   67 (302)
Q Consensus         2 v~~~~~~~~----~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----------   67 (302)
                      |.+.++|-+    |||+|.+ |-+++ +.++.++ ..+++...++.+.+|++++++|||+.+++|-|+||          
T Consensus       154 v~m~~wFdyrghiCivfell-G~S~~-dFlk~N~-y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~  230 (415)
T KOG0671|consen  154 VQMRDWFDYRGHICIVFELL-GLSTF-DFLKENN-YIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEY  230 (415)
T ss_pred             EeeehhhhccCceEEEEecc-ChhHH-HHhccCC-ccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccce
Confidence            334445553    8999988 44899 7787765 45799999999999999999999999999999999          


Q ss_pred             --------------CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh
Q psy3574          68 --------------KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE  133 (302)
Q Consensus        68 --------------~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~  133 (302)
                                    ...+..|||+|||.|.....   ...+.+.|.+|.|||+++   +.+++.++||||+||||+|+.+
T Consensus       231 ~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e---~hs~iVsTRHYRAPEViL---gLGwS~pCDvWSiGCIL~Elyt  304 (415)
T KOG0671|consen  231 FKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE---HHSTIVSTRHYRAPEVIL---GLGWSQPCDVWSIGCILVELYT  304 (415)
T ss_pred             EEEeccCCccceeccCCCcceEEEecCCcceecc---CcceeeeccccCCchhee---ccCcCCccCceeeeeEEEEeec
Confidence                          12355699999999876543   235678899999999998   8889999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHhcCCCCCCCCC----------------C-------------------------CCCCHHHHH
Q psy3574         134 LQPPMFDLHPMRALFLMSKSGFKPPALKD----------------K-------------------------DRWSSTFHN  172 (302)
Q Consensus       134 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~----------------~-------------------------~~~s~~~~~  172 (302)
                      |...|...++.+-+........+.|....                +                         +.--.++.|
T Consensus       305 G~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfD  384 (415)
T KOG0671|consen  305 GETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFD  384 (415)
T ss_pred             cceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHH
Confidence            99999877655533332221111111000                0                         001234789


Q ss_pred             HHHHhhhcCCCCCCCHHHHHH
Q psy3574         173 FVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       173 li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ||++||..||.+|+|+.|+|.
T Consensus       385 Ll~~mL~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  385 LLRRMLEFDPARRITLREALS  405 (415)
T ss_pred             HHHHHHccCccccccHHHHhc
Confidence            999999999999999999999

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.97  E-value=7.1e-30  Score=224.87  Aligned_cols=180  Identities=33%  Similarity=0.599  Sum_probs=144.5

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHH-hccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWA-VGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~-~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |++++.+.    .|+||||+.| +|. +++. ...   ++++.++..++.|++.||.|||++||+||||+|    ++.++
T Consensus        88 v~~~~~~~~~~~~~lv~e~~~g-~l~-~~~~~~~~---~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~  162 (317)
T cd06635          88 IEYKGCYLREHTAWLVMEYCLG-SAS-DLLEVHKK---PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG  162 (317)
T ss_pred             EEEEEEEeeCCeEEEEEeCCCC-CHH-HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCC
Confidence            44555433    5899999986 777 4544 344   689999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++.....    .....|+..|+|||.+.......++.++|+||+||++|+|++|+.||...........+..
T Consensus       163 ~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~  238 (317)
T cd06635         163 QVKLADFGSASIASP----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ  238 (317)
T ss_pred             CEEEecCCCccccCC----cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh
Confidence            999999998765432    2234688899999998532245578899999999999999999999988777766666655


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .......   ...++..+.+++.+||+.+|.+||++.++++
T Consensus       239 ~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  276 (317)
T cd06635         239 NESPTLQ---SNEWSDYFRNFVDSCLQKIPQDRPTSEELLK  276 (317)
T ss_pred             ccCCCCC---CccccHHHHHHHHHHccCCcccCcCHHHHHh
Confidence            4432221   3456889999999999999999999999999

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.97  E-value=4.6e-30  Score=232.37  Aligned_cols=155  Identities=22%  Similarity=0.323  Sum_probs=122.7

Q ss_pred             cccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhccc
Q psy3574          35 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAA  108 (302)
Q Consensus        35 ~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~  108 (302)
                      .+++..+..++.||+.||+|||++||+||||||    ++.++.+||+|||+++.......  ......++..|+|||.+.
T Consensus       233 ~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~  312 (400)
T cd05105         233 GLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIF  312 (400)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhc
Confidence            366777889999999999999999999999999    77888999999999876543221  122334677899999985


Q ss_pred             ccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC
Q psy3574         109 VERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT  187 (302)
Q Consensus       109 ~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t  187 (302)
                         +..++.++|||||||++|+|++ |..||...................+   .+..++..+.+++.+||+.+|++||+
T Consensus       313 ---~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPt  386 (400)
T cd05105         313 ---DNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMA---KPDHATQEVYDIMVKCWNSEPEKRPS  386 (400)
T ss_pred             ---CCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCC---CCccCCHHHHHHHHHHCccCHhHCcC
Confidence               5668899999999999999997 9999987654444444333332222   23567899999999999999999999


Q ss_pred             HHHHHHHH
Q psy3574         188 ADKLLQVI  195 (302)
Q Consensus       188 ~~~ll~~l  195 (302)
                      +.++.+.+
T Consensus       387 ~~~l~~~l  394 (400)
T cd05105         387 FLHLSDIV  394 (400)
T ss_pred             HHHHHHHH
Confidence            99988744

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.97  E-value=4.4e-30  Score=228.58  Aligned_cols=177  Identities=20%  Similarity=0.248  Sum_probs=136.2

Q ss_pred             hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC-CCCCEEEecccccc
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD-RCGDVKLADFGVSA   83 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~-~~~~ikL~DFg~a~   83 (302)
                      ..|+||||+++ +|. .++..+    .+++..++.++.||+.||.|||+.|++||||||    ++ .++.+||+|||.+.
T Consensus        90 ~~~lv~e~~~~-~L~-~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~  163 (342)
T cd07854          90 SVYIVQEYMET-DLA-NVLEQG----PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLAR  163 (342)
T ss_pred             eEEEEeecccc-cHH-HHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccce
Confidence            35899999975 888 666543    589999999999999999999999999999999    43 56789999999987


Q ss_pred             ccccccc---cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC----
Q psy3574          84 QITATIN---KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFK----  156 (302)
Q Consensus        84 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----  156 (302)
                      .+.....   ......++..|+|||.+.  ....++.++|+|||||++|+|++|+.||...+.......+......    
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  241 (342)
T cd07854         164 IVDPHYSHKGYLSEGLVTKWYRSPRLLL--SPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREE  241 (342)
T ss_pred             ecCCccccccccccccccccccCHHHHh--CccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence            6543211   112235788999999875  2345788999999999999999999999877665554443321100    


Q ss_pred             ------------------CCCC---CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         157 ------------------PPAL---KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       157 ------------------~~~~---~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                        .+..   .....++.++.+||.+||+.||.+|||+.+++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         242 DRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             HhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence                              0000   011346788999999999999999999999999

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.97  E-value=9.8e-30  Score=218.59  Aligned_cols=191  Identities=16%  Similarity=0.224  Sum_probs=143.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc--cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT--AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      |+++++.+.    +|+||||+++|+|. +++.....  ...+++..+..++.||+.||+|||++||+||||||    ++.
T Consensus        57 ii~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~  135 (269)
T cd05042          57 VLQCLGQCIESIPYLLVLEFCPLGDLK-NYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTA  135 (269)
T ss_pred             cceEEEEECCCCceEEEEEeCCCCcHH-HHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecC
Confidence            466666544    69999999999999 76655331  11245677889999999999999999999999999    888


Q ss_pred             CCCEEEeccccccccccccc--cccccccCcccchhhccccc----ccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCh
Q psy3574          71 CGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVE----RKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHP  143 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~----~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~  143 (302)
                      ++.+||+|||++........  ......++..|+|||++...    ....++.++||||+||++|+|++ |..||.....
T Consensus       136 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~  215 (269)
T cd05042         136 DLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD  215 (269)
T ss_pred             CCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH
Confidence            99999999999865432211  11223456789999997421    12356789999999999999999 7889887776


Q ss_pred             HHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         144 MRALFLMSKSGF-KPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       144 ~~~~~~i~~~~~-~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ......+..... ..+.......++..+.+++..|+ .||++||+++++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         216 EQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence            666555544332 22333334568899999999998 59999999999987

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=7.5e-30  Score=220.46  Aligned_cols=178  Identities=21%  Similarity=0.205  Sum_probs=140.4

Q ss_pred             hheeEEEecCCcchHHHHHHhc-cccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccc
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSA   83 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~   83 (302)
                      ..|+|+||+++ +|. +++... .   .+++..+..++.|++.||+|||++||+||||+|    ++.++.+||+|||.+.
T Consensus        72 ~~~~v~e~~~~-~l~-~~i~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~  146 (282)
T cd07829          72 KLYLVFEYCDM-DLK-KYLDKRPG---PLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLAR  146 (282)
T ss_pred             ceEEEecCcCc-CHH-HHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCccc
Confidence            36899999985 898 677665 4   699999999999999999999999999999999    7788999999999987


Q ss_pred             ccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC-------
Q psy3574          84 QITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFK-------  156 (302)
Q Consensus        84 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-------  156 (302)
                      .............++..|+|||.+.  ....++.++|+|||||++|+|++|.+||...........+......       
T Consensus       147 ~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (282)
T cd07829         147 AFGIPLRTYTHEVVTLWYRAPEILL--GSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWP  224 (282)
T ss_pred             ccCCCccccCccccCcCcCChHHhc--CCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHH
Confidence            7654433333445678899999986  2336788999999999999999999999877665554443321100       


Q ss_pred             -----------CCCC------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         157 -----------PPAL------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       157 -----------~~~~------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                 .+..      .....++..+.++|.+||..+|++||++.+++.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         225 GVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             hhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence                       0000      011234788999999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.97  E-value=8.4e-30  Score=217.94  Aligned_cols=184  Identities=17%  Similarity=0.241  Sum_probs=145.7

Q ss_pred             chhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCE
Q psy3574           2 SRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDV   74 (302)
Q Consensus         2 v~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~i   74 (302)
                      +++++.+.   .|+||||+.+|+|. +++.... +..+++.++..++.|++.||+|||+.|++||||+|    ++.++.+
T Consensus        64 ~~~~~~~~~~~~~~v~e~~~~~~L~-~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~  141 (260)
T cd05067          64 VRLYAVVTQEPIYIITEYMENGSLV-DFLKTPE-GIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCC  141 (260)
T ss_pred             eeEEEEEccCCcEEEEEcCCCCCHH-HHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCE
Confidence            44555433   58999999999999 6665432 23688899999999999999999999999999999    8889999


Q ss_pred             EEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHh
Q psy3574          75 KLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        75 kL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~  152 (302)
                      +|+|||++........ ......++..|+|||++.   ...++.++|+||||+++|+|++ |++||.+.+.......+..
T Consensus       142 ~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~---~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~  218 (260)
T cd05067         142 KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLER  218 (260)
T ss_pred             EEccCcceeecCCCCcccccCCcccccccCHHHhc---cCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHc
Confidence            9999999876653211 122334567899999985   5668899999999999999999 9999988776666555443


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      .. ..   ..+..++.++.+++.+||+.+|++||++++++..
T Consensus       219 ~~-~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  256 (260)
T cd05067         219 GY-RM---PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSV  256 (260)
T ss_pred             CC-CC---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            22 22   2235578899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.97  E-value=1.1e-29  Score=217.25  Aligned_cols=185  Identities=17%  Similarity=0.221  Sum_probs=142.5

Q ss_pred             Cchhhhcch-----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL-----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~-----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.+.     .|+||||+.+|+|. .++....  ..+++..+..++.|++.||+|||+.+++||||+|    ++.+
T Consensus        58 iv~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~  134 (262)
T cd05058          58 VLSLLGICLPSEGSPLVVLPYMKHGDLR-NFIRSET--HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDES  134 (262)
T ss_pred             cceEEEEeecCCCCcEEEEecCCCCCHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCC
Confidence            456666433     58999999999999 7766533  1456677888999999999999999999999999    8888


Q ss_pred             CCEEEecccccccccccc----ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHH
Q psy3574          72 GDVKLADFGVSAQITATI----NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRA  146 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~  146 (302)
                      +.+||+|||+++......    .......++..|+|||.+.   ...++.++|||||||++|+|++ |.+||...+....
T Consensus       135 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~  211 (262)
T cd05058         135 FTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQ---TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDI  211 (262)
T ss_pred             CcEEECCccccccccCCcceeecccccCcCCccccChhHhc---cCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence            999999999987654321    1111234567899999985   5668899999999999999999 4667776666665


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         147 LFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       147 ~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ...+..... +   ..+..++..+.+++.+||..+|++||++.++++.+
T Consensus       212 ~~~~~~~~~-~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l  256 (262)
T cd05058         212 TVYLLQGRR-L---LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRI  256 (262)
T ss_pred             HHHHhcCCC-C---CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence            555443321 1   12345688999999999999999999999999844

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.97  E-value=4.2e-30  Score=228.23  Aligned_cols=185  Identities=20%  Similarity=0.244  Sum_probs=143.6

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      |+++++.+.      .|+||||+.+ +|. .++..+    .+++..++.++.||+.||.|||++||+||||+|    ++.
T Consensus        69 i~~~~~~~~~~~~~~~~lv~e~~~~-~L~-~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~  142 (337)
T cd07852          69 IVKLLNVIKAENDKDIYLVFEYMET-DLH-AVIRAN----ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNS  142 (337)
T ss_pred             ccceeeeeccCCCceEEEEeccccc-CHH-HHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC
Confidence            466766543      5899999985 888 666543    488889999999999999999999999999999    889


Q ss_pred             CCCEEEeccccccccccccc-----cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          71 CGDVKLADFGVSAQITATIN-----KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                      ++.+||+|||.+........     ......|+..|+|||.+.  ....++.++|+|||||++|+|++|+.||.+.....
T Consensus       143 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~  220 (337)
T cd07852         143 DCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILL--GSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN  220 (337)
T ss_pred             CCcEEEeeccchhccccccccccCcchhcccccccccCceeee--ccccccccchHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            99999999999876644321     223356889999999875  23457889999999999999999999998766555


Q ss_pred             HHHHHHhcCCC--------------------------CCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFK--------------------------PPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~--------------------------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+......                          .+.......++.++.++|.+||+.+|.+|||+.++++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~  294 (337)
T cd07852         221 QLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE  294 (337)
T ss_pred             HHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence            44433222110                          0001112336889999999999999999999999999

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.97  E-value=5.4e-30  Score=221.91  Aligned_cols=177  Identities=21%  Similarity=0.182  Sum_probs=140.0

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|++|||+.+ +|. +++.... ...+++..++.++.|++.||.|||+.|++|+||+|    ++.++.+||+|||++...
T Consensus        81 ~~l~~e~~~~-~l~-~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~  157 (287)
T cd07838          81 LTLVFEHVDQ-DLA-TYLSKCP-KPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIY  157 (287)
T ss_pred             eEEEehhccc-CHH-HHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceec
Confidence            6899999986 788 6666543 12589999999999999999999999999999999    778899999999998776


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC-------
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP-------  158 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-------  158 (302)
                      .... ......++..|+|||.+.   +..++.++|+||+||++|+|++|.+||.+....+....+......+.       
T Consensus       158 ~~~~-~~~~~~~~~~~~~PE~~~---~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (287)
T cd07838         158 SFEM-ALTSVVVTLWYRAPEVLL---QSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRN  233 (287)
T ss_pred             cCCc-ccccccccccccChHHhc---cCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCC
Confidence            5432 223345788899999986   55688999999999999999999999988777666655543211000       


Q ss_pred             ---------------CCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         159 ---------------ALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       159 ---------------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                     .......++..+.++|.+||+.||.+||++.+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence                           00001234678899999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.97  E-value=9.1e-30  Score=222.81  Aligned_cols=187  Identities=15%  Similarity=0.172  Sum_probs=146.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-------------cccccccchhHHHhhHHHHHHHHHhCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-------------AIELAELQPPMFDLHPMRALFLMSKSGFKPP   63 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hr   63 (302)
                      |+++++.+.    .|+||||+.+|+|. .++.....             ...++...+..++.||+.||.|||++|++||
T Consensus        83 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~  161 (304)
T cd05101          83 IINLLGACTQDGPLYVIVEYASKGNLR-EYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHR  161 (304)
T ss_pred             chheeEEEecCCceEEEEecCCCCcHH-HHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence            456666544    58999999999999 77665321             1136667788999999999999999999999


Q ss_pred             CCcC----CCCCCCEEEecccccccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCC
Q psy3574          64 ALKD----KDRCGDVKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQP  136 (302)
Q Consensus        64 dlkp----~~~~~~ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~  136 (302)
                      ||||    ++.++.+||+|||+++........  .....++..|+|||++.   +..++.++||||||+++|+|++ |..
T Consensus       162 dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~~~g~~  238 (304)
T cd05101         162 DLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALF---DRVYTHQSDVWSFGVLMWEIFTLGGS  238 (304)
T ss_pred             ccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhc---cCCCCchhhHHHHHHHHHHHHcCCCC
Confidence            9999    778899999999999876432211  12234567899999985   5668899999999999999998 888


Q ss_pred             CCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         137 PMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       137 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ||.+.........+..... .   ..+..++..+.+|+.+||..+|.+||++.++++.+
T Consensus       239 p~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l  293 (304)
T cd05101         239 PYPGIPVEELFKLLKEGHR-M---DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDL  293 (304)
T ss_pred             CcccCCHHHHHHHHHcCCc-C---CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHH
Confidence            9887777666655543321 1   12356789999999999999999999999999855

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.97  E-value=1.2e-29  Score=217.13  Aligned_cols=176  Identities=20%  Similarity=0.272  Sum_probs=141.8

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+.+|+|. +++.... ...+++..+..++.|++.||.|||+.|++||||+|    +++++.++|+|||.+...
T Consensus        75 ~~~v~e~~~~~~L~-~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~  152 (260)
T cd05069          75 IYIVTEFMGKGSLL-DFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLI  152 (260)
T ss_pred             cEEEEEcCCCCCHH-HHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEc
Confidence            58999999999999 6765432 12478888999999999999999999999999999    888999999999999765


Q ss_pred             ccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCC
Q psy3574          86 TATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKDK  163 (302)
Q Consensus        86 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  163 (302)
                      ..... ......++..|+|||.+.   +..++.++|+|||||++|+|++ |..||.+....+....+... ...+   .+
T Consensus       153 ~~~~~~~~~~~~~~~~y~~Pe~~~---~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~---~~  225 (260)
T cd05069         153 EDNEYTARQGAKFPIKWTAPEAAL---YGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG-YRMP---CP  225 (260)
T ss_pred             cCCcccccCCCccchhhCCHHHhc---cCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCC---CC
Confidence            43211 112234567899999885   5568899999999999999999 99999887776666555443 2222   23


Q ss_pred             CCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         164 DRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       164 ~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      ..++..+.+++.+||..+|++||+++++++.
T Consensus       226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  256 (260)
T cd05069         226 QGCPESLHELMKLCWKKDPDERPTFEYIQSF  256 (260)
T ss_pred             cccCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            4578899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.97  E-value=6.8e-30  Score=226.44  Aligned_cols=177  Identities=18%  Similarity=0.226  Sum_probs=138.1

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+++||+.+ +|. .++....   .+++..++.++.||+.||.|||++|++||||||    ++.++.+||+|||++...
T Consensus        81 ~~~~~e~~~~-~L~-~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~  155 (332)
T cd07857          81 LYLYEELMEA-DLH-QIIRSGQ---PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGF  155 (332)
T ss_pred             EEEEEecccC-CHH-HHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence            4788998864 888 6776655   799999999999999999999999999999999    788899999999999865


Q ss_pred             ccccc----cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC----
Q psy3574          86 TATIN----KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKP----  157 (302)
Q Consensus        86 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~----  157 (302)
                      .....    ......|+..|+|||.+.  ....++.++|+||+||++|+|++|.+||...+.......+......+    
T Consensus       156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  233 (332)
T cd07857         156 SENPGENAGFMTEYVATRWYRAPEIML--SFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET  233 (332)
T ss_pred             ccccccccccccCcccCccccCcHHHh--CCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence            43211    123356899999999875  23457899999999999999999999998766444333322211000    


Q ss_pred             ----------------------CCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         158 ----------------------PALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       158 ----------------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                            +.......++..+.+|+.+||+.||.+|||+.+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         234 LSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             HHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                                  000112345789999999999999999999999999

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.97  E-value=1.2e-29  Score=216.93  Aligned_cols=175  Identities=19%  Similarity=0.240  Sum_probs=141.2

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+.+++|. +++.... ...+++..++.++.|++.||+|||++|++||||+|    ++.++.++|+|||.+...
T Consensus        75 ~~lv~e~~~~~~L~-~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~  152 (260)
T cd05070          75 IYIVTEYMSKGSLL-DFLKDGE-GRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLI  152 (260)
T ss_pred             cEEEEEecCCCcHH-HHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeec
Confidence            58999999999999 6665432 12588899999999999999999999999999999    778889999999999765


Q ss_pred             cccccc-ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCC
Q psy3574          86 TATINK-RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKDK  163 (302)
Q Consensus        86 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  163 (302)
                      ...... .....++..|+|||.+.   ...++.++|+||||+++|+|++ |.+||.+.+..+....+.... ..+   .+
T Consensus       153 ~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~---~~  225 (260)
T cd05070         153 EDNEYTARQGAKFPIKWTAPEAAL---YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY-RMP---CP  225 (260)
T ss_pred             cCcccccccCCCCCccccChHHHh---cCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCC---CC
Confidence            442211 11223556799999985   5568899999999999999999 899998877776666554432 222   23


Q ss_pred             CCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         164 DRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       164 ~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...+..+.+++.+||..+|++|||+.++.+
T Consensus       226 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  255 (260)
T cd05070         226 QDCPISLHELMLQCWKKDPEERPTFEYLQS  255 (260)
T ss_pred             CcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence            557889999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.97  E-value=1.2e-29  Score=216.10  Aligned_cols=183  Identities=24%  Similarity=0.325  Sum_probs=148.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhc-cccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      |+++++.+.    .|+|+||+++++|. .++... ..+..+++..+..++.|++.||+|||+.|++|+||+|    ++.+
T Consensus        61 i~~~~~~~~~~~~~~~v~e~~~~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~  139 (256)
T cd08530          61 IISYKEAFLDGNKLCIVMEYAPFGDLS-KAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAN  139 (256)
T ss_pred             chhhhhhhccCCEEEEEehhcCCCCHH-HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecC
Confidence            345555444    58999999999999 666542 1123688999999999999999999999999999999    7778


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +.+||+|||++......  ......++..|++||.+.   ...++.++|+||+|+++|+|++|+.||...+.......+.
T Consensus       140 ~~~kl~d~g~~~~~~~~--~~~~~~~~~~~~~Pe~~~---~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~  214 (256)
T cd08530         140 DLVKIGDLGISKVLKKN--MAKTQIGTPHYMAPEVWK---GRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQ  214 (256)
T ss_pred             CcEEEeeccchhhhccC--CcccccCCccccCHHHHC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Confidence            99999999998776554  222346888999999985   5667889999999999999999999998887766555554


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ......    .+..++.++++++.+||..+|++||++.++++
T Consensus       215 ~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         215 RGKYPP----IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             cCCCCC----CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            433221    12467899999999999999999999999999

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.97  E-value=6.9e-30  Score=223.11  Aligned_cols=179  Identities=21%  Similarity=0.255  Sum_probs=138.8

Q ss_pred             hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      .+|+|+||+++ ++. ..+....  ..+++..++.++.|++.||+|||+.||+||||+|    ++.++.+||+|||++..
T Consensus        90 ~~~lv~e~~~~-~l~-~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~  165 (302)
T cd07864          90 AFYLVFEYMDH-DLM-GLLESGL--VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARL  165 (302)
T ss_pred             cEEEEEcccCc-cHH-HHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccccccc
Confidence            46899999987 666 4444332  2689999999999999999999999999999999    88899999999999876


Q ss_pred             cccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC----
Q psy3574          85 ITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPA----  159 (302)
Q Consensus        85 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~----  159 (302)
                      ...... ......++..|+|||.+.  ....++.++||||+||++|+|++|++||........+..+......+..    
T Consensus       166 ~~~~~~~~~~~~~~~~~y~~PE~~~--~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (302)
T cd07864         166 YNSEESRPYTNKVITLWYRPPELLL--GEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWP  243 (302)
T ss_pred             ccCCcccccccceeccCccChHHhc--CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence            654321 112234577899999885  2334678999999999999999999999877666555544442111100    


Q ss_pred             ---------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         160 ---------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       160 ---------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                           ......++..+.++|.+||..+|.+||++.+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         244 DVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             cccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                                 0112346889999999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.97  E-value=5.1e-30  Score=225.27  Aligned_cols=189  Identities=19%  Similarity=0.228  Sum_probs=136.6

Q ss_pred             Cchhhhcc------hheeEEEecCCcchHHHHHHhccc--cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C
Q psy3574           1 MSRVFNHF------LQVAAVERKGGYNQQCDIWAVGIT--AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~------~~~iv~E~~~~g~L~~~~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~   68 (302)
                      |+++++.+      ..|+||||+++ +|. .++.....  ...+++..++.++.||+.||+|||+++++||||+|    +
T Consensus        64 i~~~~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~  141 (316)
T cd07842          64 VVSLVEVFLEHADKSVYLLFDYAEH-DLW-QIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILV  141 (316)
T ss_pred             ccceEEEEeCCCCceEEEEEeCCCc-CHH-HHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEE
Confidence            34555543      36899999986 666 44433211  12688999999999999999999999999999999    6


Q ss_pred             CC----CCCEEEeccccccccccccc---cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q psy3574          69 DR----CGDVKLADFGVSAQITATIN---KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL  141 (302)
Q Consensus        69 ~~----~~~ikL~DFg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  141 (302)
                      +.    .+.+||+|||++........   ......++..|+|||++.  ....++.++|+|||||++|+|++|.+||.+.
T Consensus       142 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~  219 (316)
T cd07842         142 MGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLL--GARHYTKAIDIWAIGCIFAELLTLEPIFKGR  219 (316)
T ss_pred             cCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHh--CCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence            66    89999999999886644322   122346788999999885  2345789999999999999999999999755


Q ss_pred             ChHH---------HHHHHHhc-----------------------CCCCCCCC---------CCCCCCHHHHHHHHHhhhc
Q psy3574         142 HPMR---------ALFLMSKS-----------------------GFKPPALK---------DKDRWSSTFHNFVKIALTK  180 (302)
Q Consensus       142 ~~~~---------~~~~i~~~-----------------------~~~~~~~~---------~~~~~s~~~~~li~~~L~~  180 (302)
                      ....         ....+...                       ........         .....+..+.++|.+||..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  299 (316)
T cd07842         220 EAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEY  299 (316)
T ss_pred             cccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcC
Confidence            4321         11111000                       00000000         0014577899999999999


Q ss_pred             CCCCCCCHHHHHH
Q psy3574         181 NPKKRPTADKLLQ  193 (302)
Q Consensus       181 dp~~R~t~~~ll~  193 (302)
                      ||++|||+.++++
T Consensus       300 ~P~~Rps~~eil~  312 (316)
T cd07842         300 DPTKRITAEEALE  312 (316)
T ss_pred             CcccCcCHHHHhc
Confidence            9999999999999

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.97  E-value=5.9e-30  Score=219.37  Aligned_cols=179  Identities=13%  Similarity=0.129  Sum_probs=137.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++|+|. .++....  ..+++..+..++.||+.||+|||++||+||||||    ++.++
T Consensus        66 iv~~~~~~~~~~~~~lv~e~~~~~~l~-~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~  142 (262)
T cd05077          66 IVLLYGVCVRDVENIMVEEFVEFGPLD-LFMHRKS--DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREG  142 (262)
T ss_pred             EeeEEEEEecCCCCEEEEecccCCCHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCC
Confidence            466776544    58999999999998 6665432  1689999999999999999999999999999999    44333


Q ss_pred             -------CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHH-hCCCCCCCCChH
Q psy3574          73 -------DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA-ELQPPMFDLHPM  144 (302)
Q Consensus        73 -------~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~~  144 (302)
                             .+|++|||++......    ....++..|+|||.+.  ....++.++|||||||++|+|+ +|..||......
T Consensus       143 ~~~~~~~~~~l~d~g~~~~~~~~----~~~~~~~~y~aPE~~~--~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~  216 (262)
T cd05077         143 IDGECGPFIKLSDPGIPITVLSR----QECVERIPWIAPECVE--DSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA  216 (262)
T ss_pred             ccCCCCceeEeCCCCCCccccCc----ccccccccccChhhhc--CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh
Confidence                   3899999998655322    2345788999999884  2456889999999999999997 588888765544


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         145 RALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       145 ~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      +... .......     .....+.++.+||.+||+.||.+||++.++++.
T Consensus       217 ~~~~-~~~~~~~-----~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         217 EKER-FYEGQCM-----LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             HHHH-HHhcCcc-----CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            3322 2221111     112346789999999999999999999999983

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.97  E-value=1.2e-29  Score=220.52  Aligned_cols=187  Identities=18%  Similarity=0.228  Sum_probs=146.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc---------------------cccccccchhHHHhhHHHHHHHH
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT---------------------AIELAELQPPMFDLHPMRALFLM   55 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~---------------------~~~l~~~~~~~i~~qi~~aL~~l   55 (302)
                      ||++++.+.    .|+|+||+.+|+|. +++.....                     ...+++..+..++.|++.||.||
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L  143 (290)
T cd05045          65 VIKLYGACSQDGPLLLIVEYAKYGSLR-SFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYL  143 (290)
T ss_pred             EeeEEEEEecCCCcEEEEEecCCCCHH-HHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHH
Confidence            466666544    58999999999999 66654210                     12477888899999999999999


Q ss_pred             HhCCCCCCCCcC----CCCCCCEEEecccccccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHH
Q psy3574          56 SKSGFKPPALKD----KDRCGDVKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAI  129 (302)
Q Consensus        56 H~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~  129 (302)
                      |++|++||||+|    +++++.+||+|||+++........  .....++..|+|||.+.   +..++.++||||||+++|
T Consensus       144 H~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~---~~~~~~~~Di~slG~~l~  220 (290)
T cd05045         144 AEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLF---DHIYTTQSDVWSFGVLLW  220 (290)
T ss_pred             HHCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHc---cCCcchHhHHHHHHHHHH
Confidence            999999999999    778899999999998765432111  12234567899999985   566889999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         130 ELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       130 ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      +|++ |..||.+.........+... ...+   .+..++.++.+++.+||+.+|++||++.++++.+
T Consensus       221 el~t~g~~p~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l  283 (290)
T cd05045         221 EIVTLGGNPYPGIAPERLFNLLKTG-YRME---RPENCSEEMYNLMLTCWKQEPDKRPTFADISKEL  283 (290)
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHhCC-CCCC---CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHH
Confidence            9998 99999877766655444332 2221   2456789999999999999999999999998844

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.97  E-value=1.3e-29  Score=221.00  Aligned_cols=185  Identities=26%  Similarity=0.435  Sum_probs=141.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHh-CCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSK-SGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~i~Hrdlkp----~~~   70 (302)
                      |+++++.+.    .|+||||+.+ +|. .++.. ..   .+++..+..++.|++.||+|||+ .||+||||+|    ++.
T Consensus        76 i~~~~~~~~~~~~~~~v~e~~~~-~l~-~l~~~~~~---~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~  150 (296)
T cd06618          76 IVKCYGYFITDSDVFICMELMST-CLD-KLLKRIQG---PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDA  150 (296)
T ss_pred             hHhhheeeecCCeEEEEeeccCc-CHH-HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcC
Confidence            456676655    5899999865 777 55544 34   78999999999999999999997 5999999999    778


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVER-KGGYNQQCDIWAVGITAIELAELQPPMFDLHP-MRALF  148 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~  148 (302)
                      ++.+||+|||.+........ .....++..|+|||.+.+.. ...++.++|+||||+++|+|++|+.||..... .+...
T Consensus       151 ~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~  229 (296)
T cd06618         151 SGNVKLCDFGISGRLVDSKA-KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLT  229 (296)
T ss_pred             CCCEEECccccchhccCCCc-ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHH
Confidence            89999999999876644322 22335788999999985321 23478899999999999999999999976433 23333


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+....  .+.......++.++.+|+.+||..||.+||++.+++.
T Consensus       230 ~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  272 (296)
T cd06618         230 KILQEE--PPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ  272 (296)
T ss_pred             HHhcCC--CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            333322  1222222357889999999999999999999999999

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.97  E-value=1.8e-29  Score=214.50  Aligned_cols=183  Identities=18%  Similarity=0.193  Sum_probs=144.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++|+|. .++....  ..+++..+..++.|++.||.|||++|++||||+|    ++.++
T Consensus        54 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~  130 (250)
T cd05085          54 IVKLIGVCTQRQPIYIVMELVPGGDFL-SFLRKKK--DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENN  130 (250)
T ss_pred             cCeEEEEEecCCccEEEEECCCCCcHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCC
Confidence            345555443    58999999999999 6665432  1588999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccc-cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKR-KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||++.......... ....++..|+|||++.   ...++.++|+||||+++|++++ |..||...........+
T Consensus       131 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~  207 (250)
T cd05085         131 VLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALN---YGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQV  207 (250)
T ss_pred             eEEECCCccceeccccccccCCCCCCcccccCHHHhc---cCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence            99999999987544321111 1223456799999985   5567899999999999999998 99999887766655554


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .... .   ...+..++..+.+++.+||..+|++||++.++++
T Consensus       208 ~~~~-~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         208 EKGY-R---MSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             HcCC-C---CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            4321 1   1224567899999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.97  E-value=1.7e-29  Score=216.99  Aligned_cols=184  Identities=15%  Similarity=0.161  Sum_probs=145.1

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.+.    .|+||||+++++|. .++....  ..+++..+..++.|++.||+|||+.|++||||+|    ++.++.
T Consensus        69 ~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~  145 (268)
T cd05063          69 IRLEGVVTKFKPAMIITEYMENGALD-KYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLE  145 (268)
T ss_pred             eEEEEEEccCCCcEEEEEcCCCCCHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCc
Confidence            44555444    58999999999999 6665432  1689999999999999999999999999999999    778899


Q ss_pred             EEEecccccccccccccccc---ccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          74 VKLADFGVSAQITATINKRK---SFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      +||+|||++...........   ....+..|+|||++.   ...++.++|+||+||++|+|++ |..||...........
T Consensus       146 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~  222 (268)
T cd05063         146 CKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIA---YRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKA  222 (268)
T ss_pred             EEECCCccceecccccccceeccCCCcCceecCHHHhh---cCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHH
Confidence            99999999876643222111   112345799999985   5568899999999999999997 9999988777666666


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      +.... ..+   ....++..+.+++.+||..+|++||++.++++.+
T Consensus       223 i~~~~-~~~---~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l  264 (268)
T cd05063         223 INDGF-RLP---APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLL  264 (268)
T ss_pred             HhcCC-CCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            65432 222   2345688999999999999999999999998843

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.97  E-value=1.7e-29  Score=216.59  Aligned_cols=188  Identities=24%  Similarity=0.386  Sum_probs=145.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhc-cccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      |+++++.+.    .++||||+++|+|. .++... ..+..+++..+..++.+++.||+|||+.|++||||+|    ++.+
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~  142 (267)
T cd08224          64 VIKYLASFIENNELNIVLELADAGDLS-RMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITAT  142 (267)
T ss_pred             eeeeeeeeecCCeEEEEEecCCCCCHH-HHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCC
Confidence            345555544    58999999999999 666532 1123588999999999999999999999999999999    7889


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH--PMRALFL  149 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~  149 (302)
                      +.++|+|||++..............++..|+|||.+.   +..++.++|+||+||++|+|++|+.||....  .......
T Consensus       143 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  219 (267)
T cd08224         143 GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK  219 (267)
T ss_pred             CcEEEeccceeeeccCCCcccceecCCccccCHHHhc---cCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhh
Confidence            9999999999876654333334456888999999985   6668899999999999999999999986543  2222222


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      +..... ++.  ....++..+.++|.+||..+|++||++.++++.+
T Consensus       220 ~~~~~~-~~~--~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~  262 (267)
T cd08224         220 IEKCDY-PPL--PADHYSEELRDLVSRCINPDPEKRPDISYVLQVA  262 (267)
T ss_pred             hhcCCC-CCC--ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHH
Confidence            222211 111  1125788999999999999999999999998843

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.97  E-value=2.5e-29  Score=216.14  Aligned_cols=192  Identities=17%  Similarity=0.173  Sum_probs=142.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.+.    .|+||||+++|+|. .++..... ...+++..+..++.||+.||+|||+++++||||||    ++.+
T Consensus        57 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~  135 (268)
T cd05086          57 ILQCLGQCVEAIPYLLVFEYCELGDLK-SYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSD  135 (268)
T ss_pred             hhheEEEecCCCccEEEEecCCCCcHH-HHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCC
Confidence            466666555    58999999999999 66654321 12456667889999999999999999999999999    7788


Q ss_pred             CCEEEeccccccccccc--cccccccccCcccchhhcccccc----cCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChH
Q psy3574          72 GDVKLADFGVSAQITAT--INKRKSFIGTPYWMAPEVAAVER----KGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPM  144 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~----~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~  144 (302)
                      +.+||+|||++......  .......+++..|+|||++....    ...++.++|||||||++|+|++ |..||......
T Consensus       136 ~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~  215 (268)
T cd05086         136 LTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR  215 (268)
T ss_pred             ccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            99999999997643221  11223456788999999984211    2235678999999999999997 57788777766


Q ss_pred             HHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         145 RALFLMSKSGF-KPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       145 ~~~~~i~~~~~-~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      +....+..... ..+.......++..+.+++..|| .+|++||+++++++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~  265 (268)
T cd05086         216 EVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRL  265 (268)
T ss_pred             HHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHH
Confidence            66665544322 21222223457889999999999 679999999999873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=1.7e-29  Score=218.48  Aligned_cols=187  Identities=25%  Similarity=0.298  Sum_probs=143.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+ +|+|. ..+.... +..+++..+..++.|++.||.|||++|++|+||+|    ++.++
T Consensus        60 i~~~~~~~~~~~~~~lv~e~~-~~~l~-~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~  136 (283)
T cd07830          60 IVKLKEVFRENDELYFVFEYM-EGNLY-QLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPE  136 (283)
T ss_pred             chhHHHHhhcCCcEEEEEecC-CCCHH-HHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC
Confidence            345555544    58999999 67998 5554432 12689999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .++|+|||.+...... .......++..|+|||++.  ....++.++|+||||+++++|++|++||...........+..
T Consensus       137 ~~~l~d~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~--~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~  213 (283)
T cd07830         137 VVKIADFGLAREIRSR-PPYTDYVSTRWYRAPEILL--RSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICS  213 (283)
T ss_pred             CEEEeecccceeccCC-CCcCCCCCcccccCceeee--cCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHH
Confidence            9999999998766543 2223456888999999885  244578899999999999999999999987766555544433


Q ss_pred             cCCCCCC-------------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPA-------------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~-------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+..                         .......+..+.++|++||+.+|++|||+.+++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         214 VLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             hcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence            1111100                         0001123678999999999999999999999999

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.97  E-value=8.6e-30  Score=220.63  Aligned_cols=184  Identities=17%  Similarity=0.174  Sum_probs=140.6

Q ss_pred             Cchhhhcc------hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHF------LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~------~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      |+++++.+      ..|+||||+++|+|. +++...    .+++.+++.++.|++.||.|||++||+||||||    ++.
T Consensus        68 i~~~~~~~~~~~~~~~~lv~e~~~~~~l~-~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~  142 (283)
T cd05080          68 IVKYKGCCSEQGGKGLQLIMEYVPLGSLR-DYLPKH----KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDN  142 (283)
T ss_pred             EeeEEEEEecCCCceEEEEecCCCCCCHH-HHHHHc----CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcC
Confidence            35666643      258999999999999 777654    499999999999999999999999999999999    778


Q ss_pred             CCCEEEecccccccccccccc---ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-
Q psy3574          71 CGDVKLADFGVSAQITATINK---RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRA-  146 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-  146 (302)
                      ++.+||+|||++.........   .....++..|+|||.+.   ...++.++|||||||++|+|++|..||........ 
T Consensus       143 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~---~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~  219 (283)
T cd05080         143 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLK---ENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEE  219 (283)
T ss_pred             CCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhc---ccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhh
Confidence            899999999998866543211   11223566799999985   55688999999999999999999999864332110 


Q ss_pred             -------------HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         147 -------------LFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       147 -------------~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                                   ........   .....+..++..+.+++.+||+.+|++||++.++++.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l  278 (283)
T cd05080         220 MIGPKQGQMTVVRLIELLERG---MRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPIL  278 (283)
T ss_pred             hhcccccccchhhhhhhhhcC---CCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence                         00001111   11122456789999999999999999999999998843

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.97  E-value=2e-29  Score=214.81  Aligned_cols=180  Identities=17%  Similarity=0.215  Sum_probs=143.4

Q ss_pred             chhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCE
Q psy3574           2 SRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDV   74 (302)
Q Consensus         2 v~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~i   74 (302)
                      +++++.+.   .|+||||+.+|+|. .++.... ...+++..+..++.|++.||.|||++|++||||+|    ++.++.+
T Consensus        62 ~~~~~~~~~~~~~~v~e~~~~~~L~-~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~  139 (254)
T cd05083          62 VRLLGVILHNGLYIVMELMSKGNLV-NFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVA  139 (254)
T ss_pred             CeEEEEEcCCCcEEEEECCCCCCHH-HHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcE
Confidence            44444433   58999999999999 6665543 22578889999999999999999999999999999    7788999


Q ss_pred             EEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q psy3574          75 KLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        75 kL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~  153 (302)
                      ||+|||++......   ......+..|+|||.+.   ...++.++|+|||||++|+|++ |..||...........+...
T Consensus       140 kl~Dfg~~~~~~~~---~~~~~~~~~y~~pe~~~---~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  213 (254)
T cd05083         140 KVSDFGLARVGSMG---VDNSKLPVKWTAPEALK---HKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG  213 (254)
T ss_pred             EECCCccceecccc---CCCCCCCceecCHHHhc---cCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC
Confidence            99999998754332   11223456799999985   5668899999999999999997 99999887776655555443


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       154 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                       ..+.   ....++..+.+++.+||+.+|++||++.++++
T Consensus       214 -~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         214 -YRME---PPEGCPADVYVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             -CCCC---CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence             2221   13567899999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1.1e-29  Score=226.02  Aligned_cols=172  Identities=23%  Similarity=0.254  Sum_probs=134.7

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      +|+|+||+.+ +|. .+.  ..   .+++..+..++.|++.||+|||++|++||||+|    ++.++.+||+|||+++..
T Consensus        95 ~~lv~e~~~~-~l~-~~~--~~---~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~  167 (342)
T cd07879          95 FYLVMPYMQT-DLQ-KIM--GH---PLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHA  167 (342)
T ss_pred             EEEEeccccc-CHH-HHH--cC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence            4899999975 776 444  22   588999999999999999999999999999999    788999999999998765


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC--------
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKP--------  157 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~--------  157 (302)
                      ..   ......++..|+|||.+.  ....++.++|+|||||++|+|++|+.||.+.+.......+......+        
T Consensus       168 ~~---~~~~~~~~~~y~aPE~~~--~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (342)
T cd07879         168 DA---EMTGYVVTRWYRAPEVIL--NWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKL  242 (342)
T ss_pred             CC---CCCCceeeecccChhhhc--CccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence            32   223446788999999985  22457889999999999999999999998876555444433311000        


Q ss_pred             ------------CCC------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         158 ------------PAL------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       158 ------------~~~------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                  +..      ......+..+.+||.+||+.||.+||++.+++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~  296 (342)
T cd07879         243 EDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE  296 (342)
T ss_pred             cccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                        000      001246788999999999999999999999999

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.97  E-value=2.2e-29  Score=216.53  Aligned_cols=185  Identities=16%  Similarity=0.169  Sum_probs=147.6

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++++.+.   .|+||||+++|+|. +++....  ..+++..+..++.|++.||+|||+.|++||||+|    ++..+.
T Consensus        69 i~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~  145 (270)
T cd05056          69 IVKLIGVITENPVWIVMELAPLGELR-SYLQVNK--YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDC  145 (270)
T ss_pred             hhceeEEEcCCCcEEEEEcCCCCcHH-HHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCC
Confidence            456666444   58999999999999 7776543  2589999999999999999999999999999999    778899


Q ss_pred             EEEeccccccccccccccc-cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATINKR-KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||++.......... ....++..|+|||.+.   ...++.++|+|||||++|+|++ |..||......+....+.
T Consensus       146 ~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~  222 (270)
T cd05056         146 VKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESIN---FRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIE  222 (270)
T ss_pred             eEEccCceeeecccccceecCCCCccccccChhhhc---cCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            9999999987665432111 1223456799999985   5668899999999999999986 999998887766665554


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .....    ..+..++..+.++|.+||..+|.+|||+.+++..+
T Consensus       223 ~~~~~----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l  262 (270)
T cd05056         223 NGERL----PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQL  262 (270)
T ss_pred             cCCcC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            43222    22456789999999999999999999999998844

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=2.2e-29  Score=215.44  Aligned_cols=185  Identities=16%  Similarity=0.183  Sum_probs=145.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+.+++|. +++.... +..+++..+..++.|++.||.|||++|++||||+|    ++.++
T Consensus        63 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~  140 (261)
T cd05068          63 LIQLYAVCTLEEPIYIVTELMKYGSLL-EYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENN  140 (261)
T ss_pred             ccceeEEEecCCCeeeeeecccCCcHH-HHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCC
Confidence            345555443    58999999999999 6665432 23688999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccccc-cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKR-KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||++.......... .....+..|+|||.+.   ...++.++|+||||+++|+|++ |+.||.+.........+
T Consensus       141 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~  217 (261)
T cd05068         141 ICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAAL---YNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQV  217 (261)
T ss_pred             CEEECCcceEEEccCCcccccCCCcCceeccCccccc---cCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            99999999998765321111 1112245799999985   5668899999999999999999 99999887777666655


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      .... ..+   .+..++..+.+++.+||+.+|.+||++.++++.
T Consensus       218 ~~~~-~~~---~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~  257 (261)
T cd05068         218 DQGY-RMP---CPPGCPKELYDIMLDCWKEDPDDRPTFETLQWK  257 (261)
T ss_pred             HcCC-CCC---CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence            4432 211   234578999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG2345|consensus

Probab=99.96  E-value=2.9e-30  Score=207.93  Aligned_cols=182  Identities=20%  Similarity=0.221  Sum_probs=141.7

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCC--CCCCCCcC----CCCCCCEEEecccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG--FKPPALKD----KDRCGDVKLADFGVSA   83 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--i~Hrdlkp----~~~~~~ikL~DFg~a~   83 (302)
                      .||++.|+..|+|.+.+-.....+..++|.++..|+.+|++||.+||+..  ++||||||    +.+.+.++|.|||.+.
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~  177 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSAT  177 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence            58999999999999444444433346999999999999999999999998  99999999    6678999999999997


Q ss_pred             cccccccc---------ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHh
Q psy3574          84 QITATINK---------RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHP--MRALFLMSK  152 (302)
Q Consensus        84 ~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~  152 (302)
                      ...-....         ......|..|+|||.+.+..+...+.++|||||||++|.|+.|..||...-.  ......+..
T Consensus       178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n  257 (302)
T KOG2345|consen  178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQN  257 (302)
T ss_pred             ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeec
Confidence            65432111         1223468899999999876677788999999999999999999999953211  011112222


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      .++..|.   ...+|..+.++|+.||+.||.+||++.+++..
T Consensus       258 ~q~s~P~---~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  258 AQISIPN---SSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             cccccCC---CCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            3333333   34589999999999999999999999999883

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.96  E-value=2.8e-29  Score=218.00  Aligned_cols=186  Identities=16%  Similarity=0.242  Sum_probs=145.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc-------------------ccccccccchhHHHhhHHHHHHHHHh
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI-------------------TAIELAELQPPMFDLHPMRALFLMSK   57 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~-------------------~~~~l~~~~~~~i~~qi~~aL~~lH~   57 (302)
                      ||++++.+.    .|+||||+.+|+|. .++....                   ....+++..+..++.|++.||.|||+
T Consensus        70 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~  148 (288)
T cd05050          70 IVKLLGVCAVGKPMCLLFEYMAYGDLN-EFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE  148 (288)
T ss_pred             hheEEEEEcCCCccEEEEecCCCCCHH-HHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh
Confidence            456666544    58999999999999 6665321                   01246777889999999999999999


Q ss_pred             CCCCCCCCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHH
Q psy3574          58 SGFKPPALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL  131 (302)
Q Consensus        58 ~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~el  131 (302)
                      +|++||||+|    ++.++.+||+|||++........  ......++..|+|||.+.   ...++.++|+|||||++|+|
T Consensus       149 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el  225 (288)
T cd05050         149 RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIF---YNRYTTESDVWAYGVVLWEI  225 (288)
T ss_pred             CCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHh---cCCCCchhHHHHHHHHHHHH
Confidence            9999999999    78899999999999875533211  111223466799999985   56689999999999999999


Q ss_pred             Hh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         132 AE-LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       132 l~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      ++ |..||.+....+....+......    ..+..++..+.+||.+||+.+|.+|||+.++++.
T Consensus       226 ~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~  285 (288)
T cd05050         226 FSYGMQPYYGMAHEEVIYYVRDGNVL----SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRI  285 (288)
T ss_pred             HhCCCCCCCCCCHHHHHHHHhcCCCC----CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            97 88899888777766665544322    1234578899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>KOG0669|consensus

Probab=99.96  E-value=4.7e-30  Score=207.36  Aligned_cols=178  Identities=18%  Similarity=0.213  Sum_probs=145.8

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      +|+|+.+|+. +|. -++....  ..++..+++.++.+++.||.|+|...|+|||+|+    ++.+|.+||+|||+++.+
T Consensus        99 ~ylVf~~ceh-DLa-GlLsn~~--vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~f  174 (376)
T KOG0669|consen   99 FYLVFDFCEH-DLA-GLLSNRK--VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAF  174 (376)
T ss_pred             eeeeHHHhhh-hHH-HHhcCcc--ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccce
Confidence            5899999998 888 6666542  2788999999999999999999999999999999    889999999999999876


Q ss_pred             ccccc----cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC--CCCC
Q psy3574          86 TATIN----KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF--KPPA  159 (302)
Q Consensus        86 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--~~~~  159 (302)
                      .....    ..+..+.|.+|++||.+.+  ...|+.+.|+|..||++.+|++|.+-+.+......+..|.....  .+..
T Consensus       175 s~~~n~~kprytnrvvTLwYrppEllLG--~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkev  252 (376)
T KOG0669|consen  175 STSKNVVKPRYTNRVVTLWYRPPELLLG--DREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEV  252 (376)
T ss_pred             ecccccCCCCcccceeeeecCCHHHhhc--ccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCccc
Confidence            54322    2234466999999999984  56699999999999999999999999999988888877766221  1111


Q ss_pred             CCC----------------------------CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         160 LKD----------------------------KDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       160 ~~~----------------------------~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ++.                            +..-++++.+|+.++|..||.+|+.+.++++
T Consensus       253 WP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln  314 (376)
T KOG0669|consen  253 WPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN  314 (376)
T ss_pred             CCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence            111                            1112468899999999999999999999999

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.96  E-value=2.2e-29  Score=214.58  Aligned_cols=184  Identities=19%  Similarity=0.257  Sum_probs=147.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|++|||+++++|. +++..... ..+++..+..++.|++.||+|||+.|++|+||+|    ++.++
T Consensus        63 i~~~~~~~~~~~~~~~i~e~~~~~~l~-~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~  140 (258)
T smart00219       63 IVKLLGVCTEEEPLMIVMEYMEGGDLL-DYLRKNRP-KELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENL  140 (258)
T ss_pred             hheEEEEEcCCCeeEEEEeccCCCCHH-HHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCC
Confidence            456666655    58999999999999 77765440 1189999999999999999999999999999999    88889


Q ss_pred             CEEEecccccccccccccccc-ccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRK-SFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      .++|+|||.+........... ...++..|+|||.+.   ...++.++|+||+||++|+|++ |..||...+.......+
T Consensus       141 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~---~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~  217 (258)
T smart00219      141 VVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLK---DGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYL  217 (258)
T ss_pred             eEEEcccCCceecccccccccccCCCcccccChHHhc---cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            999999999876654311111 123678899999984   5668899999999999999998 88898877776666655


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ......    ..+..++.++.+++.+||..+|++|||+.++++
T Consensus       218 ~~~~~~----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      218 KKGYRL----PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             hcCCCC----CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence            544322    223457899999999999999999999999987

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=3.3e-29  Score=213.68  Aligned_cols=183  Identities=17%  Similarity=0.199  Sum_probs=146.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++++|. +++.... ...+++..+..++.|++.||.|||++|++||||+|    ++.++
T Consensus        62 i~~~~~~~~~~~~~~~v~e~~~~~~L~-~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~  139 (256)
T cd05039          62 LVQLLGVVLQGNPLYIVTEYMAKGSLV-DYLRSRG-RAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDL  139 (256)
T ss_pred             eeeeEEEEcCCCCeEEEEEecCCCcHH-HHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCC
Confidence            355555544    58999999999999 7765543 12589999999999999999999999999999999    78899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      .+||+|||.+........   ...++..|+|||.+.   ...++.++|+||||+++|+|++ |..||...........+.
T Consensus       140 ~~~l~d~g~~~~~~~~~~---~~~~~~~~~ape~~~---~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~  213 (256)
T cd05039         140 VAKVSDFGLAKEASQGQD---SGKLPVKWTAPEALR---EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVE  213 (256)
T ss_pred             CEEEcccccccccccccc---cCCCcccccCchhhc---CCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Confidence            999999999987643211   233466799999985   5567889999999999999997 999998776665554444


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ... .   ...+..++..+.++|.+||..+|++||++.++++.+
T Consensus       214 ~~~-~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l  253 (256)
T cd05039         214 KGY-R---MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQL  253 (256)
T ss_pred             cCC-C---CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHH
Confidence            321 1   122356789999999999999999999999998843

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.96  E-value=2e-29  Score=216.56  Aligned_cols=184  Identities=14%  Similarity=0.199  Sum_probs=146.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++|+|. .++....  ..+++.++..++.|++.||+|||++|++||||+|    ++.++
T Consensus        67 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~  143 (267)
T cd05066          67 IIHLEGVVTKSKPVMIVTEYMENGSLD-AFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNL  143 (267)
T ss_pred             cceEEEEEecCCccEEEEEcCCCCCHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCC
Confidence            456665544    58999999999999 6665543  1588899999999999999999999999999999    77889


Q ss_pred             CEEEecccccccccccccccc---ccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRK---SFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALF  148 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~  148 (302)
                      .+||+|||.+...........   ...++..|+|||.+.   ...++.++|+|||||++|++++ |..||.+....+...
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~---~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~  220 (267)
T cd05066         144 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA---YRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIK  220 (267)
T ss_pred             eEEeCCCCcccccccccceeeecCCCccceeecCHhHhc---cCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHH
Confidence            999999999887654322111   122356799999995   5668899999999999999886 999998877666655


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      .+... ...+   ....++..+.+++.+||+.+|.+||++.++++.
T Consensus       221 ~~~~~-~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  262 (267)
T cd05066         221 AIEEG-YRLP---APMDCPAALHQLMLDCWQKDRNERPKFEQIVSI  262 (267)
T ss_pred             HHhCC-CcCC---CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHH
Confidence            55443 2222   234568899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.96  E-value=2.8e-29  Score=215.81  Aligned_cols=191  Identities=16%  Similarity=0.185  Sum_probs=140.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc--cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT--AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      ||++++.+.    .|+||||+++|+|. +++.....  ...+++..+..++.|++.||+|||++|++||||||    ++.
T Consensus        57 iv~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~  135 (269)
T cd05087          57 LLQCLGQCTEVTPYLLVMEFCPLGDLK-GYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTA  135 (269)
T ss_pred             EeeEEEEEcCCCCcEEEEECCCCCcHH-HHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC
Confidence            345555443    58999999999999 66654321  12355667788999999999999999999999999    778


Q ss_pred             CCCEEEeccccccccccccc--cccccccCcccchhhccccccc----CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCh
Q psy3574          71 CGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERK----GGYNQQCDIWAVGITAIELAE-LQPPMFDLHP  143 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~----~~~~~~~DiwslG~il~ell~-g~~pf~~~~~  143 (302)
                      ++.+||+|||.++.......  ......++..|+|||++.+...    ..++.++|+||+||++|+|++ |..||.....
T Consensus       136 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~  215 (269)
T cd05087         136 DLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD  215 (269)
T ss_pred             CCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh
Confidence            89999999999865433211  1123456788999999852211    235789999999999999996 9999987666


Q ss_pred             HHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         144 MRALFLMSKSG-FKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       144 ~~~~~~i~~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+......... ...+........+..+.+++.+|+ .+|++|||+++++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         216 EQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             HHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            55544433322 222222222346788999999998 68999999999986

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.96  E-value=1.4e-29  Score=225.36  Aligned_cols=173  Identities=20%  Similarity=0.242  Sum_probs=137.6

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      +|+||||+ |++|. .++...    .+++..++.++.||+.||+|||+.||+||||+|    ++.++.+||+|||++...
T Consensus        95 ~~lv~e~~-~~~l~-~~~~~~----~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~  168 (343)
T cd07880          95 FYLVMPFM-GTDLG-KLMKHE----KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQT  168 (343)
T ss_pred             EEEEEecC-CCCHH-HHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence            48999999 66888 777643    589999999999999999999999999999999    778899999999998765


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC-------
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP-------  158 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-------  158 (302)
                      ...   .....+++.|+|||.+.  ....++.++|+||+||++|+|++|..||.+.+.......+.......+       
T Consensus       169 ~~~---~~~~~~~~~y~aPE~~~--~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (343)
T cd07880         169 DSE---MTGYVVTRWYRAPEVIL--NWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKL  243 (343)
T ss_pred             ccC---ccccccCCcccCHHHHh--CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence            432   23346788999999985  224578999999999999999999999987765544443332111110       


Q ss_pred             -------------C------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         159 -------------A------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       159 -------------~------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                   .      ......++..+.++|.+||+.||.+|||+.+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         244 QSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             cchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                         0      0012356788999999999999999999999999

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.96  E-value=3.4e-29  Score=213.56  Aligned_cols=183  Identities=14%  Similarity=0.140  Sum_probs=144.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++|+|. +++....  ..+++..++.++.|++.||+|||++|++||||+|    ++.++
T Consensus        61 i~~~~~~~~~~~~~~~v~e~~~~~~L~-~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~  137 (256)
T cd05112          61 LVQLYGVCTERSPICLVFEFMEHGCLS-DYLRAQR--GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQ  137 (256)
T ss_pred             eeeEEEEEccCCceEEEEEcCCCCcHH-HHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCC
Confidence            355666554    58999999999999 6665432  1688999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||.+........ ......++..|+|||.+.   +..++.++|+||+|+++|+|++ |..||...........+
T Consensus       138 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~---~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~  214 (256)
T cd05112         138 VVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFS---FSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETI  214 (256)
T ss_pred             eEEECCCcceeecccCcccccCCCccchhhcCHhHhc---cCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH
Confidence            999999999876543211 111223467899999985   5668899999999999999998 99999877766655555


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .......    .+...+..+.+|+.+||+.+|++||++.++++
T Consensus       215 ~~~~~~~----~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~  253 (256)
T cd05112         215 NAGFRLY----KPRLASQSVYELMQHCWKERPEDRPSFSLLLH  253 (256)
T ss_pred             hCCCCCC----CCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            4332111    12446889999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.96  E-value=3.3e-29  Score=222.25  Aligned_cols=187  Identities=16%  Similarity=0.170  Sum_probs=145.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc-------------ccccccccchhHHHhhHHHHHHHHHhCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI-------------TAIELAELQPPMFDLHPMRALFLMSKSGFKPP   63 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hr   63 (302)
                      ||++++.+.    .|+|+||+++|+|. +++....             ....++..++..++.|++.||+|||++|++||
T Consensus        80 iv~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~  158 (334)
T cd05100          80 IINLLGACTQDGPLYVLVEYASKGNLR-EYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHR  158 (334)
T ss_pred             eeeeeEEEccCCceEEEEecCCCCcHH-HHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence            456666554    58999999999999 6665432             01135667778899999999999999999999


Q ss_pred             CCcC----CCCCCCEEEecccccccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCC
Q psy3574          64 ALKD----KDRCGDVKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQP  136 (302)
Q Consensus        64 dlkp----~~~~~~ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~  136 (302)
                      ||||    ++.++.+||+|||+++........  .....++..|+|||++.   ...++.++|||||||++|+|++ |..
T Consensus       159 dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~el~~~g~~  235 (334)
T cd05100         159 DLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALF---DRVYTHQSDVWSFGVLLWEIFTLGGS  235 (334)
T ss_pred             ccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhc---cCCcCchhhhHHHHHHHHHHHhcCCC
Confidence            9999    778899999999998765432111  11223456799999985   5668899999999999999998 889


Q ss_pred             CCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         137 PMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       137 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ||.+.+.......+..... .   ..+..++..+.+++.+||+.+|.+||++.++++.+
T Consensus       236 p~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l  290 (334)
T cd05100         236 PYPGIPVEELFKLLKEGHR-M---DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDL  290 (334)
T ss_pred             CCCCCCHHHHHHHHHcCCC-C---CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence            9988777666655544321 1   12345688999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.96  E-value=1.8e-29  Score=224.89  Aligned_cols=173  Identities=20%  Similarity=0.257  Sum_probs=135.4

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|++++++ |++|. .+++..    .+++..++.++.|++.||+|||++||+||||+|    ++.++.+||+|||++...
T Consensus        97 ~~lv~~~~-~~~L~-~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~  170 (345)
T cd07877          97 VYLVTHLM-GADLN-NIVKCQ----KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT  170 (345)
T ss_pred             EEEEehhc-ccCHH-HHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccc
Confidence            47888876 66998 777643    489999999999999999999999999999999    888899999999998765


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC--------
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKP--------  157 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~--------  157 (302)
                      ..   ......++..|+|||.+.  ....++.++|+||+||++|+|++|+.||...+.......+......+        
T Consensus       171 ~~---~~~~~~~~~~y~aPE~~~--~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (345)
T cd07877         171 DD---EMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI  245 (345)
T ss_pred             cc---cccccccCCCccCHHHHh--CccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence            43   223456789999999985  23457889999999999999999999997766554443332211100        


Q ss_pred             ---------------CCC---CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         158 ---------------PAL---KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       158 ---------------~~~---~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                     +..   ......++.+.+||.+||+.||.+|+++.+++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  299 (345)
T cd07877         246 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  299 (345)
T ss_pred             ccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence                           000   001235788999999999999999999999999

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.96  E-value=3.5e-29  Score=218.03  Aligned_cols=189  Identities=15%  Similarity=0.166  Sum_probs=144.5

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhcc--------ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC--
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGI--------TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD--   67 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~--------~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp--   67 (302)
                      |++++.+.    .|+||||+.+++|. .++....        ....+++..++.++.|++.||+|||++|++||||||  
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N  160 (296)
T cd05051          82 ARLLGVCTVDPPLCMIMEYMENGDLN-QFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN  160 (296)
T ss_pred             eEEEEEEecCCCcEEEEecCCCCCHH-HHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence            45554433    58999999999999 6665432        012588899999999999999999999999999999  


Q ss_pred             --CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh--CCCCCCCC
Q psy3574          68 --KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE--LQPPMFDL  141 (302)
Q Consensus        68 --~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~--g~~pf~~~  141 (302)
                        ++.++.++|+|||++........  ......++..|+|||.+.   ...++.++|||||||++|+|++  |..||...
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~  237 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVL---LGKFTTKSDVWAFGVTLWEILTLCREQPYEHL  237 (296)
T ss_pred             eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhh---cCCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence              77889999999999876543211  122334677899999985   5568899999999999999998  78888776


Q ss_pred             ChHHHHHHHHhc---CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         142 HPMRALFLMSKS---GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       142 ~~~~~~~~i~~~---~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      ............   .........+..++.++.+++.+||+.||.+|||+.++++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~  293 (296)
T cd05051         238 TDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLF  293 (296)
T ss_pred             ChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHH
Confidence            666555544332   01111122234567899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.96  E-value=2.7e-29  Score=216.67  Aligned_cols=178  Identities=16%  Similarity=0.185  Sum_probs=137.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC-
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR-   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~-   70 (302)
                      ||++++.+.    .|+||||+++|+|. .++.. .+   .+++.++..++.||+.||+|||++||+||||||    ++. 
T Consensus        78 iv~~~~~~~~~~~~~lv~ey~~~g~L~-~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~  153 (274)
T cd05076          78 LAFVHGVCVRGSENIMVEEFVEHGPLD-VCLRKEKG---RVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARL  153 (274)
T ss_pred             eeeEEEEEEeCCceEEEEecCCCCcHH-HHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEecc
Confidence            466777554    58999999999998 66654 33   688999999999999999999999999999999    332 


Q ss_pred             ------CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCh
Q psy3574          71 ------CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA-ELQPPMFDLHP  143 (302)
Q Consensus        71 ------~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~  143 (302)
                            .+.+|++|||.+......    ....++..|+|||.+.  ....++.++|+|||||++|+|+ +|..||.....
T Consensus       154 ~~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~--~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~  227 (274)
T cd05076         154 GLAEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVP--GGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP  227 (274)
T ss_pred             CcccCccceeeecCCccccccccc----cccccCCcccCchhhc--CCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh
Confidence                  335899999987544322    2235778899999885  2355789999999999999984 79999987655


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         144 MRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       144 ~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      ......... ....     +...+..+.++|.+||+.+|++||++.++++.
T Consensus       228 ~~~~~~~~~-~~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         228 SEKERFYEK-KHRL-----PEPSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             HHHHHHHHh-ccCC-----CCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            443332222 1111     12346789999999999999999999999983

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.96  E-value=3.1e-29  Score=213.13  Aligned_cols=176  Identities=15%  Similarity=0.170  Sum_probs=140.0

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+.|++|. +++....  ..+++..+..++.+++.||+|||++|++||||+|    ++.++.+||+|||.+...
T Consensus        67 ~~~v~e~~~~~~l~-~~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~  143 (251)
T cd05041          67 IYIVMELVPGGSLL-TFLRKKK--NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREE  143 (251)
T ss_pred             eEEEEEcCCCCcHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccc
Confidence            58999999999999 6665432  1688889999999999999999999999999999    888899999999998765


Q ss_pred             ccccccc--cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCC
Q psy3574          86 TATINKR--KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKD  162 (302)
Q Consensus        86 ~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  162 (302)
                      .......  ....++..|+|||.+.   +..++.++|+|||||++|+|++ |..||...........+.... .   ...
T Consensus       144 ~~~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~-~---~~~  216 (251)
T cd05041         144 EGGIYTVSDGLKQIPIKWTAPEALN---YGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY-R---MPA  216 (251)
T ss_pred             cCCcceeccccCcceeccCChHhhc---cCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC-C---CCC
Confidence            4221111  1122356799999985   5568899999999999999999 889998777665555544321 1   122


Q ss_pred             CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         163 KDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       163 ~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      +..++..+.+++.+||..+|.+||++.++++.+
T Consensus       217 ~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l  249 (251)
T cd05041         217 PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNEL  249 (251)
T ss_pred             CccCCHHHHHHHHHHhccChhhCcCHHHHHHHh
Confidence            356788999999999999999999999999843

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0194|consensus

Probab=99.96  E-value=4.4e-30  Score=230.27  Aligned_cols=184  Identities=20%  Similarity=0.303  Sum_probs=153.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |||+||...    +|||||+|.||+|. ++++...  ..++..+...++.+.+.||+|||+++++||||-.    +...+
T Consensus       223 VVr~yGVa~~~~Pl~ivmEl~~gGsL~-~~L~k~~--~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~  299 (474)
T KOG0194|consen  223 VVRFYGVAVLEEPLMLVMELCNGGSLD-DYLKKNK--KSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKG  299 (474)
T ss_pred             EEEEEEEEcCCCccEEEEEecCCCcHH-HHHHhCC--CCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCC
Confidence            689999666    59999999999999 6776654  1589999999999999999999999999999999    66667


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      .+||+|||+++.............-...|+|||.+.   ..-|+.++||||+||++||+++ |..||.+....+....|.
T Consensus       300 ~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~---~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~  376 (474)
T KOG0194|consen  300 VVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLN---TGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIV  376 (474)
T ss_pred             eEEeCccccccCCcceeeccccccCcceecChhhhc---cCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHH
Confidence            789999999876542211111112467899999996   6689999999999999999999 889999999999999987


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..++..+.   +...+..+..++.+|+..+|+.||++.++.+
T Consensus       377 ~~~~r~~~---~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  377 KNGYRMPI---PSKTPKELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             hcCccCCC---CCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence            76655444   2456788999999999999999999999987

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.96  E-value=5.1e-29  Score=217.27  Aligned_cols=190  Identities=15%  Similarity=0.193  Sum_probs=142.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc--------cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT--------AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-   67 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~--------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-   67 (302)
                      |+++++.+.    .|+||||+.+|+|. .++.....        ...+++.++..++.|++.||+|||++|++|||||| 
T Consensus        81 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~  159 (296)
T cd05095          81 IIRLLAVCITSDPLCMITEYMENGDLN-QFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATR  159 (296)
T ss_pred             cceEEEEEecCCccEEEEEeCCCCcHH-HHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChh
Confidence            456666554    58999999999999 66655321        01356668999999999999999999999999999 


Q ss_pred             ---CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh--CCCCCCC
Q psy3574          68 ---KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE--LQPPMFD  140 (302)
Q Consensus        68 ---~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~--g~~pf~~  140 (302)
                         ++.++.++|+|||++..+.....  ......++..|++||...   ...++.++|+|||||++|+|++  |..||..
T Consensus       160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~  236 (296)
T cd05095         160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL---LGKFTTASDVWAFGVTLWEILTLCKEQPYSQ  236 (296)
T ss_pred             eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHh---cCCccchhhhhHHHHHHHHHHHhCCCCCccc
Confidence               77889999999999876543211  111223467899999875   5568899999999999999998  7789876


Q ss_pred             CChHHHHHHHHh---cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         141 LHPMRALFLMSK---SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       141 ~~~~~~~~~i~~---~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      ............   ..........+..++..+.+|+.+||+.||.+||++.++++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  293 (296)
T cd05095         237 LSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHAT  293 (296)
T ss_pred             cChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            655544432211   111111122235578899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.96  E-value=4.4e-29  Score=214.38  Aligned_cols=187  Identities=20%  Similarity=0.295  Sum_probs=144.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc----cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT----AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~   68 (302)
                      |+++++.+.    .|+||||+++|+|. +++.....    ...+++..+..++.|++.||+|||+++++|+||+|    +
T Consensus        61 i~~~~~~~~~~~~~~~v~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~  139 (269)
T cd05044          61 IVKLLGVCLLNEPQYIIMELMEGGDLL-SYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLV  139 (269)
T ss_pred             eeeEeeeecCCCCeEEEEeccCCCcHH-HHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEE
Confidence            456666554    58999999999999 66654210    12477888999999999999999999999999999    5


Q ss_pred             CCCC-----CEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q psy3574          69 DRCG-----DVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFD  140 (302)
Q Consensus        69 ~~~~-----~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~  140 (302)
                      +.++     .+||+|||++........  ......++..|+|||.+.   ...++.++|||||||++|+|++ |..||..
T Consensus       140 ~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~ellt~g~~p~~~  216 (269)
T cd05044         140 SEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLL---DGKFTTQSDVWSFGVLMWEILTLGQQPYPA  216 (269)
T ss_pred             ecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHc---cCCcccchhHHHHHHHHHHHHHcCCCCCcc
Confidence            5555     899999999876543211  112234567899999985   5668899999999999999998 9999987


Q ss_pred             CChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         141 LHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       141 ~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .+.......+.....    ...+..++..+.++|.+||..+|.+||++.++++.+
T Consensus       217 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l  267 (269)
T cd05044         217 LNNQEVLQHVTAGGR----LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEIL  267 (269)
T ss_pred             cCHHHHHHHHhcCCc----cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHH
Confidence            777666555543321    122356788999999999999999999999998743

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG0662|consensus

Probab=99.96  E-value=7.1e-30  Score=196.83  Aligned_cols=186  Identities=21%  Similarity=0.221  Sum_probs=152.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      |||.++.--    +-+|+|||.. +|. .++.. ++   .+..+.++.++.|+++||.|||+++++|||+||    ++.+
T Consensus        63 ivrl~dvlhsdkkltlvfe~cdq-dlk-kyfdslng---~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~n  137 (292)
T KOG0662|consen   63 IVRLHDVLHSDKKLTLVFEFCDQ-DLK-KYFDSLNG---DLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRN  137 (292)
T ss_pred             eeehhhhhccCceeEEeHHHhhH-HHH-HHHHhcCC---cCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccC
Confidence            466666433    4799999987 888 66654 44   789999999999999999999999999999999    8999


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      |.+||+|||+++.+.-...+....+.|.+|.+|.++.+  .+-|+...|+||.||++.|+.. |.+.|.+.+-.+.+.+|
T Consensus       138 gelkladfglarafgipvrcysaevvtlwyrppdvlfg--akly~tsidmwsagcifaelanagrplfpg~dvddqlkri  215 (292)
T KOG0662|consen  138 GELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG--AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI  215 (292)
T ss_pred             CcEEecccchhhhcCCceEeeeceeeeeeccCcceeee--eehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHH
Confidence            99999999999988877666666778999999999983  4568999999999999999987 77778888888888887


Q ss_pred             HhcCCCCCCCC------------------------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALK------------------------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~------------------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...-..+....                        ...+++..-+|++.++|.-+|..|++++.+++
T Consensus       216 f~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  216 FRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             HHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence            76332221100                        01234566799999999999999999999999

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.96  E-value=3.7e-29  Score=213.45  Aligned_cols=179  Identities=16%  Similarity=0.207  Sum_probs=136.4

Q ss_pred             Cchhhhcc---hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC-
Q psy3574           1 MSRVFNHF---LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG-   72 (302)
Q Consensus         1 iv~~~~~~---~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~-   72 (302)
                      |+++++.+   ..|+||||+++|+|. .++....  ..+++..+..++.||+.||.|||++||+||||||    ++..+ 
T Consensus        63 i~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~  139 (259)
T cd05037          63 LVKLYGVCVRDENIMVEEYVKFGPLD-VFLHREK--NNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGL  139 (259)
T ss_pred             hhheeeEEecCCcEEEEEcCCCCcHH-HHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCcc
Confidence            35556554   468999999999999 6665433  1588899999999999999999999999999999    55555 


Q ss_pred             ------CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHH
Q psy3574          73 ------DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMR  145 (302)
Q Consensus        73 ------~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~  145 (302)
                            .+||+|||++.....    .....++..|+|||++... ...++.++|+||+||++|+|++ |..||.......
T Consensus       140 ~~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~  214 (259)
T cd05037         140 NEGYVPFIKLSDPGIPITVLS----REERVERIPWIAPECIRNG-QASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE  214 (259)
T ss_pred             ccCCceeEEeCCCCccccccc----ccccccCCCccChhhhcCC-CCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh
Confidence                  799999999876543    1233567789999998521 1367899999999999999999 578886665433


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ......... ..+     ......+.++|.+||..+|.+||++.++++
T Consensus       215 ~~~~~~~~~-~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         215 KERFYQDQH-RLP-----MPDCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             HHHHHhcCC-CCC-----CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence            332222111 111     112378999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG1026|consensus

Probab=99.96  E-value=1.5e-29  Score=234.51  Aligned_cols=187  Identities=17%  Similarity=0.243  Sum_probs=156.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-----------cccccccchhHHHhhHHHHHHHHHhCCCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-----------AIELAELQPPMFDLHPMRALFLMSKSGFKPPAL   65 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdl   65 (302)
                      |||++|.-.    +|+|+|||..|||. .++.....           ..+|+..+...|+.||+.|+.||-++.+|||||
T Consensus       551 IVrLlGVC~~~~P~~MvFEYm~~GDL~-eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDL  629 (774)
T KOG1026|consen  551 IVRLLGVCREGDPLCMVFEYMDHGDLH-EFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDL  629 (774)
T ss_pred             eEEEEEEEccCCeeEEEEEecccccHH-HHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccch
Confidence            688888777    59999999999999 55544321           123788899999999999999999999999999


Q ss_pred             cC----CCCCCCEEEecccccccccccccc-cc-ccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCC
Q psy3574          66 KD----KDRCGDVKLADFGVSAQITATINK-RK-SFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPM  138 (302)
Q Consensus        66 kp----~~~~~~ikL~DFg~a~~~~~~~~~-~~-~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf  138 (302)
                      ..    +.++..|||+|||+++..=...-. .. ...-..+|||||.++   ...|+.++||||+||+|||+++ |+.||
T Consensus       630 ATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIl---y~kFTteSDVWs~GVvLWEIFsyG~QPy  706 (774)
T KOG1026|consen  630 ATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESIL---YGKFTTESDVWSFGVVLWEIFSYGKQPY  706 (774)
T ss_pred             hhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhh---cCcccchhhhhhhhhhhhhhhccccCcc
Confidence            99    889999999999999865332111 11 112366899999997   8889999999999999999998 99999


Q ss_pred             CCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         139 FDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       139 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .+..+.+.+..+..+..    +.-+..++.++.+|+..||+.+|++||++.||-..|
T Consensus       707 ~glSn~EVIe~i~~g~l----L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L  759 (774)
T KOG1026|consen  707 YGLSNQEVIECIRAGQL----LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRL  759 (774)
T ss_pred             cccchHHHHHHHHcCCc----ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence            99999999999988764    344688999999999999999999999999986633

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=6e-29  Score=212.61  Aligned_cols=183  Identities=17%  Similarity=0.207  Sum_probs=144.9

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++++.+.    .|+||||+++++|. +++.... ...+++..+..++.|++.||.|||++|++|+||+|    ++.++.
T Consensus        64 ~~~~~~~~~~~~~~~v~e~~~~~~L~-~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~  141 (261)
T cd05034          64 VQLYAVCSEEEPIYIVTEYMSKGSLL-DFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLV  141 (261)
T ss_pred             eeeeeeeecCCceEEEEeccCCCCHH-HHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCC
Confidence            45555433    58999999999999 6665432 12588999999999999999999999999999999    888899


Q ss_pred             EEEecccccccccccccc-ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATINK-RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||.+......... .....++..|+|||.+.   +..++.++|+||+||++|+|++ |+.||.+.........+.
T Consensus       142 ~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~  218 (261)
T cd05034         142 CKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAAN---YGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVE  218 (261)
T ss_pred             EEECccccceeccchhhhhhhccCCCccccCHHHhc---cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            999999998766532111 11223456899999985   5668899999999999999998 999998877766666554


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ... ..   ..+...+..+.+++.+||..+|++||++.++++
T Consensus       219 ~~~-~~---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         219 RGY-RM---PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             cCC-CC---CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            432 11   123445889999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.96  E-value=4.9e-29  Score=225.62  Aligned_cols=154  Identities=19%  Similarity=0.285  Sum_probs=122.0

Q ss_pred             ccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccc
Q psy3574          36 LAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAV  109 (302)
Q Consensus        36 l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~  109 (302)
                      +++..+..++.||+.||+|||+++++||||||    ++..+.+||+|||+++.......  ......++..|+|||.+. 
T Consensus       236 l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~-  314 (401)
T cd05107         236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIF-  314 (401)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhc-
Confidence            45556778999999999999999999999999    77788999999999976533211  122345678899999985 


Q ss_pred             cccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH
Q psy3574         110 ERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA  188 (302)
Q Consensus       110 ~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~  188 (302)
                        ...++.++|+|||||++|+|++ |..||......+........+..++   .+..++.++.+++.+||..+|.+||++
T Consensus       315 --~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~---~p~~~~~~l~~li~~cl~~~P~~RPs~  389 (401)
T cd05107         315 --NNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMA---KPAHASDEIYEIMQKCWEEKFEIRPDF  389 (401)
T ss_pred             --CCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHHcCCChhHCcCH
Confidence              5568899999999999999998 8999977665555444444332222   245678999999999999999999999


Q ss_pred             HHHHHHH
Q psy3574         189 DKLLQVI  195 (302)
Q Consensus       189 ~~ll~~l  195 (302)
                      .++++.+
T Consensus       390 ~ell~~L  396 (401)
T cd05107         390 SQLVHLV  396 (401)
T ss_pred             HHHHHHH
Confidence            9999844

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.96  E-value=5.3e-29  Score=221.69  Aligned_cols=154  Identities=18%  Similarity=0.259  Sum_probs=119.7

Q ss_pred             ccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccc
Q psy3574          36 LAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAV  109 (302)
Q Consensus        36 l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~  109 (302)
                      +++..+..++.||+.||+|||++||+||||||    ++.++.+||+|||++........  ......++..|+|||.+. 
T Consensus       176 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-  254 (343)
T cd05103         176 LTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-  254 (343)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhc-
Confidence            56677788999999999999999999999999    77889999999999876543211  111223567799999985 


Q ss_pred             cccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH
Q psy3574         110 ERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA  188 (302)
Q Consensus       110 ~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~  188 (302)
                        ...++.++|+|||||++|+|++ |..||...................   ..+..+++.+.+++.+||+.+|++||++
T Consensus       255 --~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~cl~~~p~~Rps~  329 (343)
T cd05103         255 --DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTF  329 (343)
T ss_pred             --CCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCC---CCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence              5668899999999999999997 999997654433333333322221   1234467899999999999999999999


Q ss_pred             HHHHHHH
Q psy3574         189 DKLLQVI  195 (302)
Q Consensus       189 ~~ll~~l  195 (302)
                      .++++++
T Consensus       330 ~eil~~l  336 (343)
T cd05103         330 SELVEHL  336 (343)
T ss_pred             HHHHHHH
Confidence            9999854

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.96  E-value=6.5e-29  Score=213.59  Aligned_cols=178  Identities=20%  Similarity=0.207  Sum_probs=142.1

Q ss_pred             heeEEEecCCcchHHHHHHhcc---ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGI---TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVS   82 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~---~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a   82 (302)
                      .++|+||+++|+|. .++....   ....+++..+..++.|++.||.|||++|++||||||    +++++.+||+|||++
T Consensus        82 ~~~v~e~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  160 (273)
T cd05035          82 PMVILPFMKHGDLH-SFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS  160 (273)
T ss_pred             cEEEEeccCCCCHH-HHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence            58999999999999 5553321   112588889999999999999999999999999999    778899999999999


Q ss_pred             ccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCC
Q psy3574          83 AQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPA  159 (302)
Q Consensus        83 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~  159 (302)
                      +........  .....++..|+|||.+.   ...++.++|||||||++|+|++ |..||.+....+....+.....    
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~----  233 (273)
T cd05035         161 KKIYSGDYYRQGRIAKMPVKWIAIESLA---DRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNR----  233 (273)
T ss_pred             eeccccccccccccccCCccccCHhhcc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC----
Confidence            866443211  11123466899999985   5668899999999999999999 8999988777666655544321    


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         160 LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       160 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ...+..++..+.+++.+||+.||++||++.++++.+
T Consensus       234 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l  269 (273)
T cd05035         234 LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVL  269 (273)
T ss_pred             CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            123456789999999999999999999999998843

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=7.2e-29  Score=216.24  Aligned_cols=190  Identities=16%  Similarity=0.180  Sum_probs=142.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcccc---------ccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITA---------IELAELQPPMFDLHPMRALFLMSKSGFKPPALKD   67 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~---------~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp   67 (302)
                      |+++++.+.    .|+||||+.+++|. +++......         ..+++..+..++.|++.||+|||++|++||||||
T Consensus        79 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp  157 (295)
T cd05097          79 IIRLLGVCVSDDPLCMITEYMENGDLN-QFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLAT  157 (295)
T ss_pred             cCeEEEEEcCCCccEEEEecCCCCcHH-HHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccCh
Confidence            456666554    58999999999999 666543200         1356778889999999999999999999999999


Q ss_pred             ----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh--CCCCCC
Q psy3574          68 ----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE--LQPPMF  139 (302)
Q Consensus        68 ----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~--g~~pf~  139 (302)
                          ++.++.+||+|||++........  ......++..|+|||.+.   ...++.++|+|||||++|+|++  |..||.
T Consensus       158 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwSlG~~l~el~~~~~~~p~~  234 (295)
T cd05097         158 RNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESIL---LGKFTTASDVWAFGVTLWEMFTLCKEQPYS  234 (295)
T ss_pred             hhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhc---cCCcCchhhHHHHHHHHHHHHHcCCCCCCc
Confidence                77888999999999876543211  112234567899999985   5568999999999999999988  678887


Q ss_pred             CCChHHHHHHHHh---cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         140 DLHPMRALFLMSK---SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       140 ~~~~~~~~~~i~~---~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      ..........+..   ..........+..++..+.+|+.+||..+|++||++.++++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~  292 (295)
T cd05097         235 LLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHF  292 (295)
T ss_pred             ccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            7665554443322   111111112234568899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.96  E-value=5.1e-29  Score=215.69  Aligned_cols=180  Identities=21%  Similarity=0.225  Sum_probs=140.3

Q ss_pred             chheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccc
Q psy3574           8 FLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSA   83 (302)
Q Consensus         8 ~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~   83 (302)
                      ...|+|+||+++ +|. .++....  ..+++..++.++.||+.||+|||+.|++|+||+|    +++++.+||+|||.+.
T Consensus        73 ~~~~lv~e~~~~-~l~-~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~  148 (287)
T cd07840          73 GSIYMVFEYMDH-DLT-GLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLAR  148 (287)
T ss_pred             CcEEEEeccccc-cHH-HHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEcccccee
Confidence            346899999986 888 6665542  2699999999999999999999999999999999    8889999999999988


Q ss_pred             ccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCC-
Q psy3574          84 QITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK-  161 (302)
Q Consensus        84 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-  161 (302)
                      ....... ......++..|+|||.+.+  ...++.++||||||+++|+|++|+.||...+.......+......+.... 
T Consensus       149 ~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  226 (287)
T cd07840         149 PYTKRNSADYTNRVITLWYRPPELLLG--ATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENW  226 (287)
T ss_pred             eccCCCcccccccccccccCCceeeEc--cccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhc
Confidence            7654321 1223456788999998752  34578999999999999999999999988776665555443211111000 


Q ss_pred             -------------------------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         162 -------------------------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       162 -------------------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                               ....++..+.+++.+||..+|.+||++.++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         227 PGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             cccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence                                     00113788999999999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.96  E-value=6.3e-29  Score=214.80  Aligned_cols=188  Identities=15%  Similarity=0.191  Sum_probs=147.2

Q ss_pred             Cchhhhc-----chheeEEEecCCcchHHHHHHhcccc-----ccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---
Q psy3574           1 MSRVFNH-----FLQVAAVERKGGYNQQCDIWAVGITA-----IELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---   67 (302)
Q Consensus         1 iv~~~~~-----~~~~iv~E~~~~g~L~~~~~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---   67 (302)
                      |+++++.     ...++++||+.+|+|. .++......     ..+++..+..++.|++.||+|||+++++||||+|   
T Consensus        70 i~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~ni  148 (280)
T cd05043          70 ILPILHVCIEDGEPPFVLYPYMNWGNLK-LFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNC  148 (280)
T ss_pred             CCeEEEEEecCCCCCEEEEEcCCCCcHH-HHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhE
Confidence            3555554     3358999999999999 777653211     3588999999999999999999999999999999   


Q ss_pred             -CCCCCCEEEecccccccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCh
Q psy3574          68 -KDRCGDVKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHP  143 (302)
Q Consensus        68 -~~~~~~ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~  143 (302)
                       ++.++.+||+|||+++.+......  .....++..|+|||.+.   ...++.++|||||||++|++++ |+.||...+.
T Consensus       149 l~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~---~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~  225 (280)
T cd05043         149 VIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLV---NKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP  225 (280)
T ss_pred             EEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHh---cCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH
Confidence             778899999999999765432111  12234567899999985   5668899999999999999999 9999988777


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         144 MRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       144 ~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ......+... ....   ....++..+.+++.+||..+|++|||+.++++.+-
T Consensus       226 ~~~~~~~~~~-~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  274 (280)
T cd05043         226 FEMAAYLKDG-YRLA---QPINCPDELFAVMACCWALDPEERPSFSQLVQCLT  274 (280)
T ss_pred             HHHHHHHHcC-CCCC---CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence            6655444432 2222   23456889999999999999999999999988543

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0670|consensus

Probab=99.96  E-value=2.2e-30  Score=227.61  Aligned_cols=185  Identities=21%  Similarity=0.252  Sum_probs=151.1

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C-CCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K-DRCG   72 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~-~~~~   72 (302)
                      +++|.+|.    +|+|+|-+.- +|. .+++.-+.+..|....++.|+.|++.||..|..+||+|.||||    + ....
T Consensus       497 lrl~r~F~hknHLClVFE~Lsl-NLR-evLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~  574 (752)
T KOG0670|consen  497 LRLFRHFKHKNHLCLVFEPLSL-NLR-EVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKN  574 (752)
T ss_pred             HHHHHHhhhcceeEEEehhhhc-hHH-HHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcc
Confidence            68899998    4999998866 999 8898888788999999999999999999999999999999999    3 3445


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||||||.|......  ..+.+..+..|.|||+++   +..|+...|+||+||+||||.||+..|.+..+..++.....
T Consensus       575 iLKLCDfGSA~~~~en--eitPYLVSRFYRaPEIiL---G~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me  649 (752)
T KOG0670|consen  575 ILKLCDFGSASFASEN--EITPYLVSRFYRAPEIIL---GLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFME  649 (752)
T ss_pred             eeeeccCccccccccc--cccHHHHHHhccCcceee---cCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHH
Confidence            6899999999776653  344556788999999998   78899999999999999999999999999877776654433


Q ss_pred             cCCCCCCCC------------------------------------------------C-------CCCCCHHHHHHHHHh
Q psy3574         153 SGFKPPALK------------------------------------------------D-------KDRWSSTFHNFVKIA  177 (302)
Q Consensus       153 ~~~~~~~~~------------------------------------------------~-------~~~~s~~~~~li~~~  177 (302)
                      .....|...                                                .       ...+-..+++||.+|
T Consensus       650 ~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkm  729 (752)
T KOG0670|consen  650 LKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKM  729 (752)
T ss_pred             hcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHH
Confidence            221111100                                                0       001124589999999


Q ss_pred             hhcCCCCCCCHHHHHH
Q psy3574         178 LTKNPKKRPTADKLLQ  193 (302)
Q Consensus       178 L~~dp~~R~t~~~ll~  193 (302)
                      |.+||++|+|+.++|+
T Consensus       730 l~LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  730 LILDPEKRITVNQALK  745 (752)
T ss_pred             hccChhhcCCHHHHhc
Confidence            9999999999999999

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=6.7e-29  Score=214.60  Aligned_cols=185  Identities=14%  Similarity=0.117  Sum_probs=145.8

Q ss_pred             chhhhcc---hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCE
Q psy3574           2 SRVFNHF---LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDV   74 (302)
Q Consensus         2 v~~~~~~---~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~i   74 (302)
                      +++++.+   ..|+||||+++|+|. +++....  ..+++..+..++.|++.||+|||++|++||||+|    ++.++.+
T Consensus        72 ~~~~~~~~~~~~~~v~e~~~~g~L~-~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~  148 (279)
T cd05057          72 VRLLGICLSSQVQLITQLMPLGCLL-DYVRNHK--DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHV  148 (279)
T ss_pred             ceEEEEEecCceEEEEecCCCCcHH-HHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeE
Confidence            4455443   368999999999999 6665532  1589999999999999999999999999999999    7788999


Q ss_pred             EEecccccccccccccccc--ccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          75 KLADFGVSAQITATINKRK--SFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        75 kL~DFg~a~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      ||+|||.++..........  ...++..|+|||.+.   ...++.++|+||+||++|++++ |..||.+....+....+.
T Consensus       149 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~  225 (279)
T cd05057         149 KITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESIL---HRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLE  225 (279)
T ss_pred             EECCCcccccccCcccceecCCCcccccccCHHHhh---cCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHh
Confidence            9999999987654322111  112356799999985   5668899999999999999998 999998877666555554


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ... ..   ..+..++..+.+++.+||..+|.+||++.++++.+-
T Consensus       226 ~~~-~~---~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~  266 (279)
T cd05057         226 KGE-RL---PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFS  266 (279)
T ss_pred             CCC-CC---CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence            332 11   223456889999999999999999999999988554

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.96  E-value=4.3e-29  Score=217.64  Aligned_cols=174  Identities=11%  Similarity=0.148  Sum_probs=132.3

Q ss_pred             eeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccccc
Q psy3574          11 VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQIT   86 (302)
Q Consensus        11 ~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~   86 (302)
                      |+++|++.. ++. .++....   ..++..++.++.|++.||+|||+++|+||||||    ++.++.+||+|||+|+...
T Consensus       103 ~~~~~~~~~-~~~-~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~  177 (294)
T PHA02882        103 FILLEKLVE-NTK-EIFKRIK---CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFI  177 (294)
T ss_pred             EEEEehhcc-CHH-HHHHhhc---cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeec
Confidence            688888755 666 5665544   567888999999999999999999999999999    7788999999999998664


Q ss_pred             ccc-------ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHh---cCC
Q psy3574          87 ATI-------NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM-RALFLMSK---SGF  155 (302)
Q Consensus        87 ~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~---~~~  155 (302)
                      ...       .......||+.|+|||+..   +..++.++||||+||++|+|++|+.||.+.... ........   ...
T Consensus       178 ~~~~~~~~~~~~~~~~~gt~~y~ape~~~---~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~  254 (294)
T PHA02882        178 IHGKHIEYSKEQKDLHRGTLYYAGLDAHN---GACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRL  254 (294)
T ss_pred             cCCcccccccccccccCCCccccCHHHhC---CCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHh
Confidence            221       1122346999999999985   666899999999999999999999999776322 11111100   010


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         156 KPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       156 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..... .....+..+.+++..|+..+|++||++.++++
T Consensus       255 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        255 HEGKI-KIKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             hhhhh-ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            11111 12345789999999999999999999999987

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.96  E-value=9.7e-29  Score=211.42  Aligned_cols=185  Identities=16%  Similarity=0.223  Sum_probs=144.8

Q ss_pred             chhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCE
Q psy3574           2 SRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDV   74 (302)
Q Consensus         2 v~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~i   74 (302)
                      +++++.+.   .|+||||+++|+|. +++.... ...+++..+..++.|++.||.|||++|++||||+|    ++..+.+
T Consensus        64 ~~~~~~~~~~~~~~v~e~~~~~~L~-~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~  141 (260)
T cd05073          64 VKLHAVVTKEPIYIITEFMAKGSLL-DFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVC  141 (260)
T ss_pred             ceEEEEEcCCCeEEEEEeCCCCcHH-HHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcE
Confidence            44444433   58999999999999 6665532 12577888999999999999999999999999999    8889999


Q ss_pred             EEecccccccccccccc-ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHh
Q psy3574          75 KLADFGVSAQITATINK-RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        75 kL~DFg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~  152 (302)
                      ||+|||.+......... .....++..|+|||.+.   ...++.++|+|||||++|++++ |..||.+.+.......+..
T Consensus       142 ~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~  218 (260)
T cd05073         142 KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN---FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER  218 (260)
T ss_pred             EECCCcceeeccCCCcccccCCcccccccCHhHhc---cCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhC
Confidence            99999998766432211 11223566799999985   5568889999999999999998 9999988776665555443


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .. ..+   .....+.++.+++.+||+.+|++||++.+++..|
T Consensus       219 ~~-~~~---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L  257 (260)
T cd05073         219 GY-RMP---RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL  257 (260)
T ss_pred             CC-CCC---CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence            32 211   2356788999999999999999999999998744

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.96  E-value=6.6e-29  Score=213.46  Aligned_cols=184  Identities=15%  Similarity=0.200  Sum_probs=144.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++|+|. +++....  ..+++.++..++.|++.||+|||++|++||||+|    ++.++
T Consensus        67 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~  143 (269)
T cd05065          67 IIHLEGVVTKSRPVMIITEFMENGALD-SFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNL  143 (269)
T ss_pred             cceEEEEECCCCceEEEEecCCCCcHH-HHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCC
Confidence            355555544    58999999999999 6666532  1688999999999999999999999999999999    77889


Q ss_pred             CEEEecccccccccccccc--ccccc---cCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHH
Q psy3574          73 DVKLADFGVSAQITATINK--RKSFI---GTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRA  146 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~--~~~~~---gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~  146 (302)
                      .+||+|||++.........  .....   .+..|+|||.+.   ...++.++||||+||++|+|++ |..||........
T Consensus       144 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~  220 (269)
T cd05065         144 VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIA---YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV  220 (269)
T ss_pred             cEEECCCccccccccCccccccccccCCCcceeecCHhHhc---cCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHH
Confidence            9999999998765432111  11111   235799999985   5668899999999999999886 9999988777766


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         147 LFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       147 ~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      ...+... ...+   .+..++..+.+++.+||..+|.+||++.+++..
T Consensus       221 ~~~i~~~-~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  264 (269)
T cd05065         221 INAIEQD-YRLP---PPMDCPTALHQLMLDCWQKDRNARPKFGQIVST  264 (269)
T ss_pred             HHHHHcC-CcCC---CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            6555432 2222   234568899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG1151|consensus

Probab=99.96  E-value=7e-30  Score=220.90  Aligned_cols=186  Identities=18%  Similarity=0.257  Sum_probs=150.1

Q ss_pred             Cchhhhcch-----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC--CCCCCCCcC------
Q psy3574           1 MSRVFNHFL-----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS--GFKPPALKD------   67 (302)
Q Consensus         1 iv~~~~~~~-----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~--~i~Hrdlkp------   67 (302)
                      |||.|+.|.     +|-|+|||+|.+|. .++++..   .++|.+++.|+.||+.||.||.+.  -|+|-||||      
T Consensus       529 IVKlYDyfslDtdsFCTVLEYceGNDLD-FYLKQhk---lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv  604 (775)
T KOG1151|consen  529 IVKLYDYFSLDTDSFCTVLEYCEGNDLD-FYLKQHK---LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLV  604 (775)
T ss_pred             eeeeeeeeeeccccceeeeeecCCCchh-HHHHhhh---hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEe
Confidence            799999988     49999999999999 8998887   899999999999999999999987  599999999      


Q ss_pred             -CCCCCCEEEeccccccccccccc-------cccccccCcccchhhccccc-ccCCCCchhhHHHHHHHHHHHHhCCCCC
Q psy3574          68 -KDRCGDVKLADFGVSAQITATIN-------KRKSFIGTPYWMAPEVAAVE-RKGGYNQQCDIWAVGITAIELAELQPPM  138 (302)
Q Consensus        68 -~~~~~~ikL~DFg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~DiwslG~il~ell~g~~pf  138 (302)
                       -...|.|||+|||+++.+.+...       ......||.+|++||.+... .....+.++||||+|||+|.++.|+-||
T Consensus       605 ~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPF  684 (775)
T KOG1151|consen  605 NGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPF  684 (775)
T ss_pred             cCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCC
Confidence             44678899999999998865422       23446799999999998632 1234678999999999999999999999


Q ss_pred             CCCChHHHH-H--HHHh-cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         139 FDLHPMRAL-F--LMSK-SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       139 ~~~~~~~~~-~--~i~~-~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ........+ .  .|.. ....+|   ....++.++++||++||.+--+.|..+.++..
T Consensus       685 GhnqsQQdILqeNTIlkAtEVqFP---~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  685 GHNQSQQDILQENTILKATEVQFP---PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC  740 (775)
T ss_pred             CCchhHHHHHhhhchhcceeccCC---CCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence            765433222 1  1111 111222   23457999999999999999999999999999

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.96  E-value=1e-28  Score=212.81  Aligned_cols=187  Identities=16%  Similarity=0.235  Sum_probs=145.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcccc------ccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITA------IELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---   67 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~------~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---   67 (302)
                      |+++++.+.    .|+||||+++|+|. +++.....+      ..+++..+..++.|++.||+|||++||+||||||   
T Consensus        70 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Ni  148 (275)
T cd05046          70 VVRLLGLCREAEPHYMILEYTDLGDLK-QFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNC  148 (275)
T ss_pred             eeeeEEEECCCCcceEEEEecCCCcHH-HHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceE
Confidence            355555543    58999999999999 666543311      1588999999999999999999999999999999   


Q ss_pred             -CCCCCCEEEecccccccccccc-ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChH
Q psy3574          68 -KDRCGDVKLADFGVSAQITATI-NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPM  144 (302)
Q Consensus        68 -~~~~~~ikL~DFg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~  144 (302)
                       ++..+.++|+|||++....... .......++..|+|||.+.   ...++.++||||||+++|+|++ |..||......
T Consensus       149 li~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~  225 (275)
T cd05046         149 LVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQ---EDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE  225 (275)
T ss_pred             EEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCccccchH
Confidence             7788999999999986543221 1122335677899999985   5557889999999999999998 88899776666


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         145 RALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       145 ~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      .....+......   ......++..+.+++.+||..+|.+||++.+++..
T Consensus       226 ~~~~~~~~~~~~---~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         226 EVLNRLQAGKLE---LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             HHHHHHHcCCcC---CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            555554433222   12235678999999999999999999999999884

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.96  E-value=1.1e-28  Score=212.12  Aligned_cols=184  Identities=19%  Similarity=0.312  Sum_probs=147.1

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHh-CCCCCCCCcC----CCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSK-SGFKPPALKD----KDRC   71 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~i~Hrdlkp----~~~~   71 (302)
                      +++++.+.    .|+||||++|++|. +++.. ......+++..++.++.|++.||.|||+ .|++|+||+|    ++.+
T Consensus        72 ~~~~~~~~~~~~~~lv~e~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~  150 (269)
T cd08528          72 VRYYKTFLENDRLYIVMDLIEGAPLG-EHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGED  150 (269)
T ss_pred             eeEEeeEccCCeEEEEEecCCCCcHH-HHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCC
Confidence            44555444    58999999999998 66533 1112368899999999999999999996 6899999999    8888


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +.+||+|||.+....... ......|+..|+|||.+.   ...++.++|+||||+++|+|++|+.||...........+.
T Consensus       151 ~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~Pe~~~---~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~  226 (269)
T cd08528         151 DKVTITDFGLAKQKQPES-KLTSVVGTILYSCPEIVK---NEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIV  226 (269)
T ss_pred             CcEEEecccceeeccccc-ccccccCcccCcChhhhc---CCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHh
Confidence            999999999998765442 334556889999999996   5558899999999999999999999998777666655555


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....+..   ...++..+.++|.+||+.||++||++.++..
T Consensus       227 ~~~~~~~~---~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~  265 (269)
T cd08528         227 EAVYEPLP---EGMYSEDVTDVITSCLTPDAEARPDIIQVSA  265 (269)
T ss_pred             hccCCcCC---cccCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence            44333221   2356889999999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.96  E-value=6.5e-29  Score=238.18  Aligned_cols=93  Identities=28%  Similarity=0.434  Sum_probs=79.4

Q ss_pred             ccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHH
Q psy3574          96 IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVK  175 (302)
Q Consensus        96 ~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~  175 (302)
                      +||+.|+|||++.   +..++.++||||+||++|||++|..||.+.........+.......+..  ...++..+.+++.
T Consensus       541 vGT~~Y~APE~l~---~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~--~~~~~~~~~~~l~  615 (669)
T cd05610         541 LGTPDYLAPELLL---GKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEG--EEKLSVNAQNAIE  615 (669)
T ss_pred             eeCccccCHHHcC---CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcc--cccCCHHHHHHHH
Confidence            4688999999996   5668999999999999999999999999888888777776654433322  2357889999999


Q ss_pred             HhhhcCCCCCCCHHHHHH
Q psy3574         176 IALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       176 ~~L~~dp~~R~t~~~ll~  193 (302)
                      .||..||.+||++.++++
T Consensus       616 ~lL~~dP~~R~ta~e~l~  633 (669)
T cd05610         616 ILLTMDPTKRAGLKELKQ  633 (669)
T ss_pred             HHcccChhHCcCHHHHHh
Confidence            999999999999999999

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.96  E-value=6.6e-29  Score=219.75  Aligned_cols=182  Identities=19%  Similarity=0.274  Sum_probs=139.1

Q ss_pred             Cchhhhcch-----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL-----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~-----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.|.     .|+|+||+. ++|. .+++..    ++++..+..++.|++.||+|||++||+||||+|    ++.+
T Consensus        71 iv~~~~~~~~~~~~~~lv~e~~~-~~L~-~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~  144 (328)
T cd07856          71 IISLSDIFISPLEDIYFVTELLG-TDLH-RLLTSR----PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINEN  144 (328)
T ss_pred             eeeEeeeEecCCCcEEEEeehhc-cCHH-HHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCC
Confidence            355555543     589999984 5888 777643    488889999999999999999999999999999    7788


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +.+||+|||.+.....   ......++..|+|||.+.  ....++.++|+||+||++|+|++|+.||...........+.
T Consensus       145 ~~~~l~dfg~~~~~~~---~~~~~~~~~~y~aPE~~~--~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~  219 (328)
T cd07856         145 CDLKICDFGLARIQDP---QMTGYVSTRYYRAPEIML--TWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIIT  219 (328)
T ss_pred             CCEEeCccccccccCC---CcCCCcccccccCceeee--ccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            9999999999875432   223456788999999875  23568899999999999999999999997765433222211


Q ss_pred             hcCC--------------------------CCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGF--------------------------KPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~--------------------------~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....                          ..+.......++..+.++|.+||+.+|++||++.+++.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~  287 (328)
T cd07856         220 DLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA  287 (328)
T ss_pred             HHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            1000                          00000112346789999999999999999999999999

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.96  E-value=5.9e-29  Score=233.32  Aligned_cols=182  Identities=16%  Similarity=0.145  Sum_probs=124.6

Q ss_pred             hheeEEEecCCcchHHHHHHhcccc-----------------ccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVGITA-----------------IELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----   67 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~~~~-----------------~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----   67 (302)
                      .+|+|+||+.+++|. +++......                 ....+..+..++.||+.||.|||++||+||||||    
T Consensus       209 ~~~LV~ey~~~gsL~-~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NIL  287 (566)
T PLN03225        209 EYWLVWRYEGESTLA-DLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNII  287 (566)
T ss_pred             ceEEEEEecCCCcHH-HHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEE
Confidence            368999999999999 776643200                 0112334678999999999999999999999999    


Q ss_pred             CC-CCCCEEEecccccccccccc-ccccccccCcccchhhccccccc-------------------CCCCchhhHHHHHH
Q psy3574          68 KD-RCGDVKLADFGVSAQITATI-NKRKSFIGTPYWMAPEVAAVERK-------------------GGYNQQCDIWAVGI  126 (302)
Q Consensus        68 ~~-~~~~ikL~DFg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~-------------------~~~~~~~DiwslG~  126 (302)
                      ++ ..+.+||+|||+|+.+.... ......++++.|||||.+.....                   ..++.++||||+||
T Consensus       288 l~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGv  367 (566)
T PLN03225        288 FSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGL  367 (566)
T ss_pred             EeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHH
Confidence            44 46899999999998654322 22345678999999997642111                   12445679999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHh-cCCCC--------CC--------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHH
Q psy3574         127 TAIELAELQPPMFDLHPMRALFLMSK-SGFKP--------PA--------LKDKDRWSSTFHNFVKIALTKNPKKRPTAD  189 (302)
Q Consensus       127 il~ell~g~~pf~~~~~~~~~~~i~~-~~~~~--------~~--------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~  189 (302)
                      ++|+|+++..++..  ....+..+.. .....        +.        ............+||.+||+.||.+|||+.
T Consensus       368 iL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~  445 (566)
T PLN03225        368 IFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAK  445 (566)
T ss_pred             HHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHH
Confidence            99999997766432  2222222111 11000        00        000111234466999999999999999999


Q ss_pred             HHHH
Q psy3574         190 KLLQ  193 (302)
Q Consensus       190 ~ll~  193 (302)
                      ++|+
T Consensus       446 e~L~  449 (566)
T PLN03225        446 AALA  449 (566)
T ss_pred             HHhC
Confidence            9999

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.96  E-value=6.7e-29  Score=238.67  Aligned_cols=187  Identities=16%  Similarity=0.151  Sum_probs=139.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc--------cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT--------AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-   67 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~--------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-   67 (302)
                      ||++|+.+.    .|+||||++||+|. +++.....        ...++...+..++.||+.||+|||++||+|||||| 
T Consensus        64 IVkl~~v~~d~~~lyLVMEY~eGGSL~-~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPe  142 (932)
T PRK13184         64 IVPVYSICSDGDPVYYTMPYIEGYTLK-SLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPD  142 (932)
T ss_pred             cCeEEEEEeeCCEEEEEEEcCCCCCHH-HHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchh
Confidence            455665443    58999999999999 77654210        11344556788999999999999999999999999 


Q ss_pred             ---CCCCCCEEEecccccccccccc------------------ccccccccCcccchhhcccccccCCCCchhhHHHHHH
Q psy3574          68 ---KDRCGDVKLADFGVSAQITATI------------------NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI  126 (302)
Q Consensus        68 ---~~~~~~ikL~DFg~a~~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~  126 (302)
                         ++.+|.+||+|||+++......                  ......+||+.|+|||.+.   +..++.++||||+||
T Consensus       143 NILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~---g~~~S~kSDIWSLGV  219 (932)
T PRK13184        143 NILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLL---GVPASESTDIYALGV  219 (932)
T ss_pred             eEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhc---CCCCCcHhHHHHHHH
Confidence               7889999999999997652110                  0112346999999999985   666899999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       127 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ++|+|++|..||..............  ..+........+++.+.+++.+||..||++|++..+.+.
T Consensus       220 ILyELLTG~~PF~~~~~~ki~~~~~i--~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        220 ILYQMLTLSFPYRRKKGRKISYRDVI--LSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             HHHHHHHCCCCCCCcchhhhhhhhhc--cChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            99999999999977554433222111  111111223467889999999999999999987655544

>KOG0664|consensus

Probab=99.96  E-value=2.6e-30  Score=211.19  Aligned_cols=177  Identities=19%  Similarity=0.243  Sum_probs=145.6

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+|+|++.. +|. .++-...   .|+.+.++.+++||++||+|||+.||+||||||    ++++..+||||||+++..
T Consensus       132 iYV~TELmQS-DLH-KIIVSPQ---~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARve  206 (449)
T KOG0664|consen  132 LYVLTELMQS-DLH-KIIVSPQ---ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTW  206 (449)
T ss_pred             HHHHHHHHHh-hhh-heeccCC---CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEeccccccccc
Confidence            4899999987 888 7777777   899999999999999999999999999999999    888999999999999876


Q ss_pred             ccccccc-cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC----------
Q psy3574          86 TATINKR-KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG----------  154 (302)
Q Consensus        86 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~----------  154 (302)
                      ....... +..+-|-.|.|||++++  ...|+.++||||+||++.|++.++..|...++.+.+..|...-          
T Consensus       207 e~d~~~hMTqEVVTQYYRAPEiLMG--aRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~  284 (449)
T KOG0664|consen  207 DQRDRLNMTHEVVTQYYRAPELLMG--ARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKY  284 (449)
T ss_pred             chhhhhhhHHHHHHHHhccHHHhhc--chhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHH
Confidence            5543332 33456889999999995  4559999999999999999999999999888888877776521          


Q ss_pred             -------------CCCCCCCC------CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         155 -------------FKPPALKD------KDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       155 -------------~~~~~~~~------~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                   ...|....      +..-..+..+++.++|..+|.+|++.++++.
T Consensus       285 ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~  342 (449)
T KOG0664|consen  285 ACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQ  342 (449)
T ss_pred             HhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcc
Confidence                         12222211      1223457888999999999999999999999

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.96  E-value=6.9e-29  Score=215.12  Aligned_cols=176  Identities=15%  Similarity=0.232  Sum_probs=135.1

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||++|++|. .++....  ..+++.++..++.|++.||+|||++|++||||||    ++.++.+||+|||++...
T Consensus        83 ~~lv~e~~~g~~L~-~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05079          83 IKLIMEFLPSGSLK-EYLPRNK--NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI  159 (284)
T ss_pred             eEEEEEccCCCCHH-HHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCcccccc
Confidence            58999999999999 7775542  1588999999999999999999999999999999    778899999999998866


Q ss_pred             ccccc---cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------------hHHHHH
Q psy3574          86 TATIN---KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH--------------PMRALF  148 (302)
Q Consensus        86 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------------~~~~~~  148 (302)
                      .....   ......++..|+|||++.   +..++.++|+|||||++|+|+++..|.....              ......
T Consensus       160 ~~~~~~~~~~~~~~~~~~y~apE~~~---~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd05079         160 ETDKEYYTVKDDLDSPVFWYAPECLI---QSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV  236 (284)
T ss_pred             ccCccceeecCCCCCCccccCHHHhc---cCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence            44321   112345677899999985   5568899999999999999999876643211              011111


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      ........   ...+..++..+.+|+.+||+.+|.+||++.++++.
T Consensus       237 ~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         237 RVLEEGKR---LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             HHHHcCcc---CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            11111111   12245678999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.96  E-value=1.3e-28  Score=213.35  Aligned_cols=177  Identities=15%  Similarity=0.216  Sum_probs=134.2

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      +|+||||+++|+|. +++....  ..+++..+..++.|++.||+|||++|++||||||    ++.++.+||+|||++...
T Consensus        82 ~~lv~e~~~~~~L~-~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~  158 (284)
T cd05081          82 LRLVMEYLPYGSLR-DYLQKHR--ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVL  158 (284)
T ss_pred             eEEEEEecCCCCHH-HHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence            58999999999999 6665432  1689999999999999999999999999999999    888899999999999866


Q ss_pred             cccccc---ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH---------------HH
Q psy3574          86 TATINK---RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR---------------AL  147 (302)
Q Consensus        86 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---------------~~  147 (302)
                      ......   .....++..|+|||.+.   +..++.++|+|||||++|+|++|..++.......               ..
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
T cd05081         159 PQDKEYYKVREPGESPIFWYAPESLT---ESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL  235 (284)
T ss_pred             cCCCcceeecCCCCCceEeeCHHHhc---cCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence            443211   11122345699999985   5568899999999999999999877654322110               01


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         148 FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       148 ~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ..+......   ......++..+.+|+.+||..+|++|||+.++++.+
T Consensus       236 ~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l  280 (284)
T cd05081         236 IELLKNNGR---LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQV  280 (284)
T ss_pred             HHHHhcCCc---CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence            111111111   122356788999999999999999999999998844

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG1095|consensus

Probab=99.96  E-value=6.4e-29  Score=237.79  Aligned_cols=176  Identities=18%  Similarity=0.280  Sum_probs=147.5

Q ss_pred             heeEEEecCCcchHHHHHHhcc----ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGI----TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGV   81 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~----~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~   81 (302)
                      .+|++|||+||+|. .+++...    +...|+......++.+|++|++||+++++|||||..    ++....+||+|||+
T Consensus       770 ~~i~leyM~gGDL~-sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGl  848 (1025)
T KOG1095|consen  770 PLILLEYMEGGDLL-SFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGL  848 (1025)
T ss_pred             cEEEehhcccCcHH-HHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccch
Confidence            58999999999999 6666541    013588889999999999999999999999999999    88889999999999


Q ss_pred             ccccccccc-ccccc-ccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCC
Q psy3574          82 SAQITATIN-KRKSF-IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPP  158 (302)
Q Consensus        82 a~~~~~~~~-~~~~~-~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~  158 (302)
                      |+.+-.... ..... .-...|||||.+.   ...|+.++|||||||++||+++ |..||.+.++.+.+......+    
T Consensus       849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~---d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg----  921 (1025)
T KOG1095|consen  849 ARDIYDKDYYRKHGEAMLPVKWMPPESLK---DGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG----  921 (1025)
T ss_pred             hHhhhhchheeccCccccceecCCHHHHh---hcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC----
Confidence            994433211 11111 2346799999996   6889999999999999999999 899999999999888676665    


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         159 ALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       159 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+..+..++..+.++|.+||+.+|++||++..|++
T Consensus       922 RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  922 RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence            33446889999999999999999999999999988

>KOG1035|consensus

Probab=99.96  E-value=6.9e-29  Score=236.37  Aligned_cols=179  Identities=22%  Similarity=0.281  Sum_probs=137.4

Q ss_pred             cchheeEEEecCCcchHHHHHHhccccccc-cccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccc
Q psy3574           7 HFLQVAAVERKGGYNQQCDIWAVGITAIEL-AELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGV   81 (302)
Q Consensus         7 ~~~~~iv~E~~~~g~L~~~~~~~~~~~~~l-~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~   81 (302)
                      ...+||-||||+.-+|. +++..+.   .. ....++.++++|+.||+|+|++|||||||||    ++.++.|||+|||+
T Consensus       668 ~~~LYIQMEyCE~~ll~-~iI~~N~---~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGL  743 (1351)
T KOG1035|consen  668 PLILYIQMEYCEKTLLR-DIIRRNH---FNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGL  743 (1351)
T ss_pred             ceEEEEEHhhhhhhHHH-HHHHhcc---cchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeeccccc
Confidence            35679999999996666 8888776   22 4788999999999999999999999999999    88999999999999


Q ss_pred             ccccc----c--------------ccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCC-CCC
Q psy3574          82 SAQIT----A--------------TINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMF-DLH  142 (302)
Q Consensus        82 a~~~~----~--------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~-~~~  142 (302)
                      |+...    .              .....++.+||.-|+|||++.+.....|+.++|+||||+|++||+.   ||. .+.
T Consensus       744 At~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME  820 (1351)
T KOG1035|consen  744 ATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSME  820 (1351)
T ss_pred             chhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHH
Confidence            98721    0              0112345789999999999975434479999999999999999975   453 333


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         143 PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       143 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+..+.....+.+ ......--+.-..+|+.||+.||.+|||+.++|+
T Consensus       821 Ra~iL~~LR~g~iP~~-~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  821 RASILTNLRKGSIPEP-ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             HHHHHHhcccCCCCCC-cccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence            4444444443333333 1112222356778999999999999999999999

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.96  E-value=5.4e-28  Score=208.07  Aligned_cols=177  Identities=18%  Similarity=0.188  Sum_probs=139.0

Q ss_pred             eeEEEecCCcchHHHHHHhcc---ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccc
Q psy3574          11 VAAVERKGGYNQQCDIWAVGI---TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSA   83 (302)
Q Consensus        11 ~iv~E~~~~g~L~~~~~~~~~---~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~   83 (302)
                      ++++||+.+|+|. .++....   ....+++..+..++.|++.||+|||++||+||||||    ++.++.+||+|||+++
T Consensus        83 ~~~~~~~~~~~l~-~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~  161 (273)
T cd05074          83 MVILPFMKHGDLH-TFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSK  161 (273)
T ss_pred             EEEEecCCCCcHH-HHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccc
Confidence            7899999999998 5543221   112478888999999999999999999999999999    7788999999999988


Q ss_pred             ccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCC
Q psy3574          84 QITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPAL  160 (302)
Q Consensus        84 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~  160 (302)
                      .......  ......++..|++||.+.   ...++.++|||||||++|+|++ |.+||.+.+.......+......    
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~----  234 (273)
T cd05074         162 KIYSGDYYRQGCASKLPVKWLALESLA---DNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRL----  234 (273)
T ss_pred             cccCCcceecCCCccCchhhcCHhHHh---cCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcC----
Confidence            6543211  112234567899999985   5667899999999999999999 89999877766655555443211    


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         161 KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       161 ~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ..+..++..+.+++.+||+.+|++||++.++++.+
T Consensus       235 ~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l  269 (273)
T cd05074         235 KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQL  269 (273)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            12245678999999999999999999999998843

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.95  E-value=2.7e-28  Score=210.97  Aligned_cols=186  Identities=16%  Similarity=0.235  Sum_probs=141.1

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      |+++++.+.      .|+||||+++++|. .++....  ..+++..+..++.|++.||+|||++|++||||+|    ++.
T Consensus        68 i~~~~~~~~~~~~~~~~lv~e~~~~~~l~-~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~  144 (284)
T cd05038          68 IVKYKGVCEKPGGRSLRLIMEYLPSGSLR-DYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVES  144 (284)
T ss_pred             hheEEeeeecCCCCceEEEEecCCCCCHH-HHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC
Confidence            456665443      58999999999999 6665432  1589999999999999999999999999999999    778


Q ss_pred             CCCEEEecccccccccccccc---ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH--
Q psy3574          71 CGDVKLADFGVSAQITATINK---RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR--  145 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--  145 (302)
                      ++.++|+|||.+.........   .....++..|+|||.+.   ...++.++|+|||||++|+|++|..|+.......  
T Consensus       145 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~  221 (284)
T cd05038         145 EDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLR---TSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR  221 (284)
T ss_pred             CCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHc---cCCCCcccchHHHhhhhheeeccCCCcccccchhcc
Confidence            899999999999876532111   11223456799999985   5568899999999999999999999986532211  


Q ss_pred             ------------HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         146 ------------ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       146 ------------~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                                  ..........   ....+..++.++.+++.+||+.+|.+||++.++++.+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l  280 (284)
T cd05038         222 MIGIAQGQMIVTRLLELLKEGE---RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIV  280 (284)
T ss_pred             ccccccccccHHHHHHHHHcCC---cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence                        1112222221   1222355678999999999999999999999998843

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG4236|consensus

Probab=99.95  E-value=1.8e-29  Score=222.24  Aligned_cols=174  Identities=24%  Similarity=0.284  Sum_probs=145.1

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-------CCCCCCEEEeccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-------KDRCGDVKLADFGVS   82 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-------~~~~~~ikL~DFg~a   82 (302)
                      .++|||-+.| +..+-|+....  -.|++...++++.||+.||.|||-+||+|.|+||       .+.-.++||||||+|
T Consensus       638 vFVVMEKl~G-DMLEMILSsEk--gRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfA  714 (888)
T KOG4236|consen  638 VFVVMEKLHG-DMLEMILSSEK--GRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFA  714 (888)
T ss_pred             EEEEehhhcc-hHHHHHHHhhc--ccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccce
Confidence            4799999988 55535555432  2799999999999999999999999999999999       555678999999999


Q ss_pred             cccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCC
Q psy3574          83 AQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD  162 (302)
Q Consensus        83 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  162 (302)
                      +.+... .-..+.+||+.|+|||++.   .++|+..-|+||+||++|--++|..||..+...  ..+|.+..+..|.. .
T Consensus       715 RiIgEk-sFRrsVVGTPAYLaPEVLr---nkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI--ndQIQNAaFMyPp~-P  787 (888)
T KOG4236|consen  715 RIIGEK-SFRRSVVGTPAYLAPEVLR---NKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI--NDQIQNAAFMYPPN-P  787 (888)
T ss_pred             eecchh-hhhhhhcCCccccCHHHHh---hccccccccceeeeEEEEEEecccccCCCccch--hHHhhccccccCCC-c
Confidence            987754 4456789999999999995   788999999999999999999999999865443  34455554444432 2


Q ss_pred             CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         163 KDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       163 ~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +..++.++.|||..+|+..-.+|.+++..|.
T Consensus       788 W~eis~~AidlIn~LLqVkm~kRysvdk~ls  818 (888)
T KOG4236|consen  788 WSEISPEAIDLINNLLQVKMRKRYSVDKSLS  818 (888)
T ss_pred             hhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence            5678999999999999999999999999999

>KOG1027|consensus

Probab=99.95  E-value=4.1e-29  Score=230.15  Aligned_cols=184  Identities=19%  Similarity=0.205  Sum_probs=141.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccc-cchhHHHhhHHHHHHHHHhCCCCCCCCcC------C-
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKD------K-   68 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~-~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp------~-   68 (302)
                      |||||+.-+    .||++|.|.. +|. +++...+....... ...+.++.|++.||++||+.+|+||||||      . 
T Consensus       565 viRyyc~E~d~qF~YIalELC~~-sL~-dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~  642 (903)
T KOG1027|consen  565 VIRYYCSEQDRQFLYIALELCAC-SLQ-DLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVP  642 (903)
T ss_pred             eEEEEeeccCCceEEEEehHhhh-hHH-HHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEcc
Confidence            688888543    6999999988 999 88877421112222 45688999999999999999999999999      2 


Q ss_pred             --CCCCCEEEecccccccccccccc---ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCC
Q psy3574          69 --DRCGDVKLADFGVSAQITATINK---RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAEL-QPPMFDLH  142 (302)
Q Consensus        69 --~~~~~ikL~DFg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~  142 (302)
                        +....++|+|||+++.+..+...   ..+..||-+|+|||++..   ..-..++||+|+||++|+.++| .+||... 
T Consensus       643 ~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~---~~~~~avDiFslGCvfyYvltgG~HpFGd~-  718 (903)
T KOG1027|consen  643 SADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLRE---DRKTQAVDIFSLGCVFYYVLTGGSHPFGDS-  718 (903)
T ss_pred             CCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhc---cccCcccchhhcCceEEEEecCCccCCCch-
Confidence              23467899999999998765433   345679999999999963   3345699999999999999886 8998653 


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         143 PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       143 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                       .+...+|.........+.....+  ++.|||.+|++.+|..||++.++|.
T Consensus       719 -~~R~~NIl~~~~~L~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  719 -LERQANILTGNYTLVHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             -HHhhhhhhcCccceeeeccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence             33334566655444333322222  8999999999999999999999999

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.95  E-value=1.7e-28  Score=240.22  Aligned_cols=178  Identities=15%  Similarity=0.112  Sum_probs=129.0

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC----------------
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD----------------   69 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~----------------   69 (302)
                      .+.++|++ +++|. +++....  ..+++.+++.+++||+.||+|||++||+||||||    +.                
T Consensus        55 ~~~~~e~~-~~~L~-~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~  130 (793)
T PLN00181         55 IVRALECE-DVSLR-QWLDNPD--RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS  130 (793)
T ss_pred             hhhhhccC-CccHH-HHHhccc--ccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcc
Confidence            46788877 45999 7776532  2699999999999999999999999999999999    53                


Q ss_pred             ---CCCCEEEecccccccccccc----------------ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHH
Q psy3574          70 ---RCGDVKLADFGVSAQITATI----------------NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIE  130 (302)
Q Consensus        70 ---~~~~ikL~DFg~a~~~~~~~----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~e  130 (302)
                         ..+.+|++|||+++......                ......+||+.|||||++.   +..|+.++|||||||++||
T Consensus       131 ~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~~sDVwSlGviL~E  207 (793)
T PLN00181        131 GSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDN---GSSSNCASDVYRLGVLLFE  207 (793)
T ss_pred             cccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhc---cCCCCchhhhhhHHHHHHH
Confidence               34566777777765432100                0011245888999999986   6678999999999999999


Q ss_pred             HHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhH
Q psy3574         131 LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRA  200 (302)
Q Consensus       131 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~  200 (302)
                      |++|.+|+.....  ....+.... .++..   ........+++.+||..+|.+||++.+++++.|+...
T Consensus       208 Ll~~~~~~~~~~~--~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        208 LFCPVSSREEKSR--TMSSLRHRV-LPPQI---LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             HhhCCCchhhHHH--HHHHHHHhh-cChhh---hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence            9999988653221  112222111 11111   1124567899999999999999999999997776543

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.95  E-value=2.6e-27  Score=199.27  Aligned_cols=174  Identities=29%  Similarity=0.406  Sum_probs=140.9

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .++++||+.+++|. .++....   .+++..+..++.+++.++.+||+.+++|+||+|    ++.++.++|+|||.+...
T Consensus        62 ~~l~~e~~~~~~L~-~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~  137 (244)
T smart00220       62 LYLVMEYCDGGDLF-DLLKKRG---RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQL  137 (244)
T ss_pred             EEEEEeCCCCCCHH-HHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeee
Confidence            58999999999999 7776655   488999999999999999999999999999999    777899999999999876


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHhcCCCCCCCCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFD-LHPMRALFLMSKSGFKPPALKDKD  164 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~  164 (302)
                      .... ......++..|++||...   ...++.++|+|++|+++++|++|..||.. ..................  ....
T Consensus       138 ~~~~-~~~~~~~~~~~~~pE~~~---~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~  211 (244)
T smart00220      138 DPGG-LLTTFVGTPEYMAPEVLL---GKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFP--PPEW  211 (244)
T ss_pred             cccc-ccccccCCcCCCCHHHHc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCc--cccc
Confidence            5532 334456888999999985   56678899999999999999999999977 333333333332221111  1111


Q ss_pred             CCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         165 RWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       165 ~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .++.++.+++.+||..+|++||++.++++
T Consensus       212 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      212 KISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             cCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            27889999999999999999999999999

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.95  E-value=1.3e-27  Score=192.57  Aligned_cols=158  Identities=25%  Similarity=0.303  Sum_probs=119.6

Q ss_pred             cchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccccccccccccc
Q psy3574          20 YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQITATINKRKSF   95 (302)
Q Consensus        20 g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~~~~~~   95 (302)
                      |+|. +++...+  .++++.+++.++.|++.||.|||+++      ||    ++.++.+|+  ||.+......     ..
T Consensus         1 GsL~-~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~-----~~   64 (176)
T smart00750        1 VSLA-DILEVRG--RPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE-----QS   64 (176)
T ss_pred             CcHH-HHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc-----cC
Confidence            6888 7776533  26999999999999999999999998      77    778889999  9998765432     22


Q ss_pred             ccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHhcCCCC--CCCCCCCCCCH--HH
Q psy3574          96 IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMSKSGFKP--PALKDKDRWSS--TF  170 (302)
Q Consensus        96 ~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~--~~~~~~~~~s~--~~  170 (302)
                      .|++.|||||++.   +..|+.++||||+||++|+|++|+.||........ ...+.......  ........++.  .+
T Consensus        65 ~g~~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (176)
T smart00750       65 RVDPYFMAPEVIQ---GQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSF  141 (176)
T ss_pred             CCcccccChHHhc---CCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhH
Confidence            6889999999996   66789999999999999999999999976544322 22222211111  00111222333  69


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         171 HNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       171 ~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .++|.+||..+|.+||++.+++++++
T Consensus       142 ~~~i~~cl~~~p~~Rp~~~~ll~~~~  167 (176)
T smart00750      142 ADFMRVCASRLPQRREAANHYLAHCR  167 (176)
T ss_pred             HHHHHHHHhcccccccCHHHHHHHHH
Confidence            99999999999999999999999333

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG4250|consensus

Probab=99.95  E-value=8.6e-28  Score=218.41  Aligned_cols=172  Identities=23%  Similarity=0.328  Sum_probs=134.5

Q ss_pred             eeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC------CCCCCC--EEEeccccc
Q psy3574          11 VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD------KDRCGD--VKLADFGVS   82 (302)
Q Consensus        11 ~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp------~~~~~~--ikL~DFg~a   82 (302)
                      .+|||||.||+|. .+++......+|+|.++..++..+..||.|||++||+||||||      ...+|+  .||+|||.|
T Consensus        93 vlvmEyC~gGsL~-~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A  171 (732)
T KOG4250|consen   93 VLVMEYCSGGSLR-KVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA  171 (732)
T ss_pred             eEEEeecCCCcHH-HHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence            7999999999999 8888876667899999999999999999999999999999999      333344  499999999


Q ss_pred             cccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC----ChHHHHHHHHhcCCCC-
Q psy3574          83 AQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL----HPMRALFLMSKSGFKP-  157 (302)
Q Consensus        83 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~----~~~~~~~~i~~~~~~~-  157 (302)
                      +.+.++ ....+++||..|++||+.-  +.+.|+..+|.||+||++|+++||..||...    +..+....+....... 
T Consensus       172 rel~d~-s~~~S~vGT~~YLhPel~E--~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v  248 (732)
T KOG4250|consen  172 RELDDN-SLFTSLVGTEEYLHPELYE--RQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGV  248 (732)
T ss_pred             ccCCCC-CeeeeecCchhhcChHHHh--hccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCce
Confidence            999887 4677889999999999984  2477999999999999999999999999532    2233444433321110 


Q ss_pred             ----------C-----CCCCCCCCCHH----HHHHHHHhhhcCCCCCC
Q psy3574         158 ----------P-----ALKDKDRWSST----FHNFVKIALTKNPKKRP  186 (302)
Q Consensus       158 ----------~-----~~~~~~~~s~~----~~~li~~~L~~dp~~R~  186 (302)
                                |     .++.+.+++..    +...+..+|..+|.+|.
T Consensus       249 ~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  249 AIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             eEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence                      0     11122333333    45678889999999998

>KOG0668|consensus

Probab=99.95  E-value=3e-27  Score=188.73  Aligned_cols=173  Identities=15%  Similarity=0.248  Sum_probs=138.2

Q ss_pred             eeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-----CCCCCCEEEecccccccc
Q psy3574          11 VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        11 ~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-----~~~~~~ikL~DFg~a~~~   85 (302)
                      -+|+||+++.+.. .++.      .|+.-.++.++.+++.||.|||+.||.|||+||     ......++|+|.|+|...
T Consensus       111 aLiFE~v~n~Dfk-~ly~------tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY  183 (338)
T KOG0668|consen  111 SLIFEYVNNTDFK-QLYP------TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY  183 (338)
T ss_pred             hhHhhhhccccHH-HHhh------hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhc
Confidence            5899999998877 6654      588899999999999999999999999999999     445678999999999877


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCC-CCChHHHHHHHHhcC----------
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMF-DLHPMRALFLMSKSG----------  154 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~-~~~~~~~~~~i~~~~----------  154 (302)
                      .... ..+..+.++.|-.||.+.  ....|+.+-|+|||||++..|+..+-||+ +.++.+++.+|...-          
T Consensus       184 Hp~~-eYnVRVASRyfKGPELLV--dy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~  260 (338)
T KOG0668|consen  184 HPGK-EYNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLN  260 (338)
T ss_pred             CCCc-eeeeeeehhhcCCchhee--echhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHH
Confidence            6653 334456788899999997  45668999999999999999999998875 556666666665510          


Q ss_pred             ---CC-CCC------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         155 ---FK-PPA------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       155 ---~~-~~~------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                         .. .|.                  .....-.++++.||+.++|..|-.+|+|+.|++.
T Consensus       261 KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  261 KYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             HHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence               00 000                  0011224799999999999999999999999999

>KOG0984|consensus

Probab=99.94  E-value=1.3e-27  Score=187.89  Aligned_cols=148  Identities=24%  Similarity=0.336  Sum_probs=121.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHH---HHHHhccccccccccchhHHHhhHHHHHHHHHhC-CCCCCCCcC----C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQC---DIWAVGITAIELAELQPPMFDLHPMRALFLMSKS-GFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~---~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp----~   68 (302)
                      +|.|||..+    .||.||.|.. +|..   ..++.++   .++|..+-.|+..+++||.|||++ .++|||+||    +
T Consensus       107 ~V~FyGa~~regdvwIcME~M~t-Sldkfy~~v~~~g~---~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI  182 (282)
T KOG0984|consen  107 TVHFYGALFREGDVWICMELMDT-SLDKFYRKVLKKGG---TIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI  182 (282)
T ss_pred             EEEeehhhhccccEEEeHHHhhh-hHHHHHHHHHhcCC---cCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE
Confidence            477888766    4899999976 7662   2233344   899999999999999999999998 899999999    8


Q ss_pred             CCCCCEEEeccccccccccccccccccccCcccchhhccccc-ccCCCCchhhHHHHHHHHHHHHhCCCCCCC-CChHHH
Q psy3574          69 DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE-RKGGYNQQCDIWAVGITAIELAELQPPMFD-LHPMRA  146 (302)
Q Consensus        69 ~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~-~~~~~~  146 (302)
                      +..|++|+||||.+..+.++.... --.|...|||||.+... +..+|+.++||||||+.+.||.+++.||.. ..+.++
T Consensus       183 n~~GqVKiCDFGIsG~L~dSiAkt-~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~q  261 (282)
T KOG0984|consen  183 NYDGQVKICDFGISGYLVDSIAKT-MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQ  261 (282)
T ss_pred             ccCCcEEEcccccceeehhhhHHH-HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHH
Confidence            999999999999999888764332 23588899999999743 234799999999999999999999999964 567777


Q ss_pred             HHHHHhc
Q psy3574         147 LFLMSKS  153 (302)
Q Consensus       147 ~~~i~~~  153 (302)
                      +.++...
T Consensus       262 LkqvVee  268 (282)
T KOG0984|consen  262 LKQVVEE  268 (282)
T ss_pred             HHHHhcC
Confidence            7766654

>KOG4257|consensus

Probab=99.94  E-value=7e-27  Score=209.49  Aligned_cols=185  Identities=15%  Similarity=0.173  Sum_probs=153.5

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      |||..|...   .|||||+++-|.|. .+++.+.  ..|+......+++||+.||+|||++.++||||..    +.+.-.
T Consensus       453 IikLIGv~~e~P~WivmEL~~~GELr-~yLq~nk--~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~C  529 (974)
T KOG4257|consen  453 IIKLIGVCVEQPMWIVMELAPLGELR-EYLQQNK--DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQC  529 (974)
T ss_pred             hhheeeeeeccceeEEEecccchhHH-HHHHhcc--ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcce
Confidence            456666555   48999999999999 7777654  3688889999999999999999999999999999    777788


Q ss_pred             EEEecccccccccccccccccc-ccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATINKRKSF-IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||+++.+.+..-...+. .-...|||||.+.   ...++.++|||-|||++||++. |.-||.+..+.+.+-.+.
T Consensus       530 VKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESIN---fRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iE  606 (974)
T KOG4257|consen  530 VKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESIN---FRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIE  606 (974)
T ss_pred             eeecccchhhhccccchhhccccccceeecCccccc---hhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEec
Confidence            9999999999988764333221 2245699999996   6779999999999999999877 999999988887776666


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ++...    +.+.++++.+..|+.+||.++|.+||++.++...+
T Consensus       607 nGeRl----P~P~nCPp~LYslmskcWayeP~kRPrftei~~~l  646 (974)
T KOG4257|consen  607 NGERL----PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAIL  646 (974)
T ss_pred             CCCCC----CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHH
Confidence            65533    33688999999999999999999999999886644

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.94  E-value=2.5e-26  Score=211.09  Aligned_cols=183  Identities=14%  Similarity=0.097  Sum_probs=126.6

Q ss_pred             heeEEEecCCcchHHHHHHhccc---------------------cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGIT---------------------AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-   67 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~---------------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-   67 (302)
                      .|+|+||+++|+|. +++.....                     ...+++..++.++.|++.||.|||+++|+|||||| 
T Consensus       260 ~~LV~Ey~~~gsL~-~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~  338 (507)
T PLN03224        260 QWLVWKFESDATLG-DALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPE  338 (507)
T ss_pred             eEEEEEcCCCCcHH-HHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchH
Confidence            58999999999999 66653210                     01234566888999999999999999999999999 


Q ss_pred             ---CCCCCCEEEeccccccccccccccc-cccccCcccchhhcccccccC-----------------CC--CchhhHHHH
Q psy3574          68 ---KDRCGDVKLADFGVSAQITATINKR-KSFIGTPYWMAPEVAAVERKG-----------------GY--NQQCDIWAV  124 (302)
Q Consensus        68 ---~~~~~~ikL~DFg~a~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~-----------------~~--~~~~Diwsl  124 (302)
                         ++.++.+||+|||++.......... ....+++.|+|||.+......                 .|  ....|+||+
T Consensus       339 NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSl  418 (507)
T PLN03224        339 NLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTA  418 (507)
T ss_pred             hEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhH
Confidence               7788999999999987654321111 122347899999998521100                 02  234799999


Q ss_pred             HHHHHHHHhCCC-CCCCCChHHHHH--------HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCC---CCCCCHHHHH
Q psy3574         125 GITAIELAELQP-PMFDLHPMRALF--------LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNP---KKRPTADKLL  192 (302)
Q Consensus       125 G~il~ell~g~~-pf~~~~~~~~~~--------~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp---~~R~t~~~ll  192 (302)
                      ||++|+|++|.. ||.+........        ..................+..++||+.+||..+|   .+|+|+.++|
T Consensus       419 Gvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL  498 (507)
T PLN03224        419 GVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQAL  498 (507)
T ss_pred             HHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHh
Confidence            999999999986 664322111100        0000000111222345678999999999999866   6899999999


Q ss_pred             H
Q psy3574         193 Q  193 (302)
Q Consensus       193 ~  193 (302)
                      +
T Consensus       499 ~  499 (507)
T PLN03224        499 S  499 (507)
T ss_pred             C
Confidence            9

>KOG0196|consensus

Probab=99.94  E-value=4.9e-27  Score=215.07  Aligned_cols=177  Identities=15%  Similarity=0.201  Sum_probs=152.7

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      ++||+|||++|+|...+.++.+   .|+..++..+++.|+.|++||-+.|+|||||..    ++.+...|++|||+++.+
T Consensus       705 vMIiTEyMENGsLDsFLR~~DG---qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvl  781 (996)
T KOG0196|consen  705 VMIITEYMENGSLDSFLRQNDG---QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL  781 (996)
T ss_pred             eEEEhhhhhCCcHHHHHhhcCC---ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeec
Confidence            4799999999999954445555   799999999999999999999999999999999    889999999999999988


Q ss_pred             cccccccc-cccc--CcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCC
Q psy3574          86 TATINKRK-SFIG--TPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALK  161 (302)
Q Consensus        86 ~~~~~~~~-~~~g--t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~  161 (302)
                      .++..... +.-|  ...|.|||.+.   ...++.++||||+|++|||.++ |..||.++.+.+.++.|.+.-..||   
T Consensus       782 edd~~~~ytt~GGKIPiRWTAPEAIa---~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPp---  855 (996)
T KOG0196|consen  782 EDDPEAAYTTLGGKIPIRWTAPEAIA---YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPP---  855 (996)
T ss_pred             ccCCCccccccCCccceeecChhHhh---hcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCC---
Confidence            76543222 2222  45799999996   7889999999999999999665 9999999999999999888765555   


Q ss_pred             CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         162 DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       162 ~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                       +-.++..+..|+..||++|-..||.+.+|+..+-
T Consensus       856 -PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lD  889 (996)
T KOG0196|consen  856 -PMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLD  889 (996)
T ss_pred             -CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Confidence             4668999999999999999999999999998664

>KOG1187|consensus

Probab=99.94  E-value=3.6e-26  Score=202.90  Aligned_cols=189  Identities=19%  Similarity=0.250  Sum_probs=137.1

Q ss_pred             Cchhhhcch-----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCC---CCCCCCcC----C
Q psy3574           1 MSRVFNHFL-----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~-----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---i~Hrdlkp----~   68 (302)
                      ||+++|...     .++|+||+++|+|. +.+...... +|+|.....|+.++++||+|||...   |+|||||+    +
T Consensus       133 lv~LlGyC~e~~~~~~LVYEym~nGsL~-d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL  210 (361)
T KOG1187|consen  133 LVKLLGYCLEGGEHRLLVYEYMPNGSLE-DHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL  210 (361)
T ss_pred             cccEEEEEecCCceEEEEEEccCCCCHH-HHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE
Confidence            456666443     58999999999999 555544322 7899999999999999999999964   99999999    8


Q ss_pred             CCCCCEEEecccccccccccccccccc-ccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---h-
Q psy3574          69 DRCGDVKLADFGVSAQITATINKRKSF-IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH---P-  143 (302)
Q Consensus        69 ~~~~~ikL~DFg~a~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---~-  143 (302)
                      |.+.+.||+|||+|+..........+. .||.+|+|||.+.   .+..+.++|||||||++.|+++|+.+.....   . 
T Consensus       211 D~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~---~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~  287 (361)
T KOG1187|consen  211 DEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYAS---TGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGEL  287 (361)
T ss_pred             CCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhc---cCCcCcccccccchHHHHHHHhCCcccCCCCCcccc
Confidence            999999999999996654311222222 7999999999996   5668899999999999999999998776432   1 


Q ss_pred             --HHHHHHHHhcC----CCCCCCCCCCCCC-----HHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         144 --MRALFLMSKSG----FKPPALKDKDRWS-----STFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       144 --~~~~~~i~~~~----~~~~~~~~~~~~s-----~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                        .+.........    ...+.+.. ..+.     ..+..+..+|++.+|.+||++.++++.+
T Consensus       288 ~l~~w~~~~~~~~~~~eiiD~~l~~-~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L  349 (361)
T KOG1187|consen  288 SLVEWAKPLLEEGKLREIVDPRLKE-GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKEL  349 (361)
T ss_pred             cHHHHHHHHHHCcchhheeCCCccC-CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHH
Confidence              11111111111    11111110 1222     2255677899999999999999987744

>KOG4278|consensus

Probab=99.93  E-value=4.8e-25  Score=197.86  Aligned_cols=185  Identities=18%  Similarity=0.197  Sum_probs=147.3

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      |++.|...    +|||+|||..|+|. ++++... +..++.-.+..++.||..|+.||..+++|||||..    +..+..
T Consensus       326 VqLLGVCT~EpPFYIiTEfM~yGNLL-dYLRecn-r~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhi  403 (1157)
T KOG4278|consen  326 VQLLGVCTHEPPFYIITEFMCYGNLL-DYLRECN-RSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHI  403 (1157)
T ss_pred             HHHhhhhccCCCeEEEEecccCccHH-HHHHHhc-hhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccce
Confidence            44555444    58999999999999 8887765 22466667788999999999999999999999998    888888


Q ss_pred             EEEecccccccccccccccc-ccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATINKRK-SFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      ||++|||+++.+..+....+ ...-...|.|||.+.   ...++.++|||+|||+|||+.| |-.||.+.+...... +.
T Consensus       404 VKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLA---yNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~-LL  479 (1157)
T KOG4278|consen  404 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA---YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYG-LL  479 (1157)
T ss_pred             EEeeccchhhhhcCCceecccCccCcccccCccccc---ccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHH-HH
Confidence            99999999998876422211 112245699999996   6678999999999999999988 888998877665544 44


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ..++...   .+..|++.+..|++.||+++|..||++.++-+.+
T Consensus       480 EkgyRM~---~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqaf  520 (1157)
T KOG4278|consen  480 EKGYRMD---GPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAF  520 (1157)
T ss_pred             hcccccc---CCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHH
Confidence            4443332   3578999999999999999999999999986643

>KOG0199|consensus

Probab=99.93  E-value=2.9e-26  Score=207.79  Aligned_cols=190  Identities=16%  Similarity=0.194  Sum_probs=155.3

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +||+||.-.   ..+|+|++++|+|. +.++... ...|.....+.|+.||+.|+.||.++++||||+..    +.....
T Consensus       173 liRLyGvVl~qp~mMV~ELaplGSLl-drLrka~-~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprt  250 (1039)
T KOG0199|consen  173 LIRLYGVVLDQPAMMVFELAPLGSLL-DRLRKAK-KAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRT  250 (1039)
T ss_pred             eeEEeeeeccchhhHHhhhcccchHH-HHHhhcc-ccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccce
Confidence            467787666   47999999999999 5555421 23688889999999999999999999999999999    667788


Q ss_pred             EEEecccccccccccccccc---ccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          74 VKLADFGVSAQITATINKRK---SFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      |||||||+.+.+........   ...-...|+|||.+.   ...++.++|+|++||++|||++ |..||.+.....++.+
T Consensus       251 VKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLr---h~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~  327 (1039)
T KOG0199|consen  251 VKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLR---HRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKN  327 (1039)
T ss_pred             eeeecccceeccCCCCcceEecCCCcCcccccCHhHhc---cccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHh
Confidence            99999999988776433221   111244699999995   7889999999999999999998 8899999999999988


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHh
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHR  199 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~  199 (302)
                      |.....    +..+..++.++.++++.||..+|.+|||+..|.+.++..+
T Consensus       328 iD~~er----LpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~e  373 (1039)
T KOG0199|consen  328 IDAGER----LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAE  373 (1039)
T ss_pred             cccccc----CCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHh
Confidence            885432    2335778999999999999999999999999975555433

>KOG0200|consensus

Probab=99.92  E-value=1.5e-24  Score=205.40  Aligned_cols=176  Identities=19%  Similarity=0.215  Sum_probs=139.1

Q ss_pred             heeEEEecCCcchHHHHHHhcc----c-c--------ccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGI----T-A--------IELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~----~-~--------~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      .++|+||+..|+|. .+++.+.    . .        ..|+......++.||+.|++||++..++|||+..    +..+.
T Consensus       377 ~~~v~Ey~~~G~L~-~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~  455 (609)
T KOG0200|consen  377 LYVIVEYAEHGDLL-EFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNK  455 (609)
T ss_pred             eEEEEEeccCCcHH-HHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCC
Confidence            58999999999999 5555443    0 0        1377888999999999999999999999999999    77888


Q ss_pred             CEEEeccccccccccccccc-cccc--cCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC-hHHHH
Q psy3574          73 DVKLADFGVSAQITATINKR-KSFI--GTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLH-PMRAL  147 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~-~~~~--gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~-~~~~~  147 (302)
                      .+||+|||+|+......... ....  -...|||||.+.   ...|+.++||||+|++|||+++ |..||.+.. ..+..
T Consensus       456 ~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~---~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~  532 (609)
T KOG0200|consen  456 VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLF---DRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELL  532 (609)
T ss_pred             EEEEccccceeccCCCCceEecCCCCccceeecCHHHhc---cCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHH
Confidence            99999999998654432221 1112  244599999996   6779999999999999999999 899998865 44444


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         148 FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      . ....+...   ..|..++.++.++++.||+.+|++||++.++.+
T Consensus       533 ~-~l~~G~r~---~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  533 E-FLKEGNRM---EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             H-HHhcCCCC---CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            3 33333222   235778999999999999999999999999987

>KOG1290|consensus

Probab=99.92  E-value=6.1e-25  Score=192.16  Aligned_cols=64  Identities=16%  Similarity=0.119  Sum_probs=55.5

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC-CCCCCCCcC
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS-GFKPPALKD   67 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp   67 (302)
                      ||+++|+|.        +|+|+|++.. +|. .+++... +..++...++.|++||+.||.|||.+ ||||-||||
T Consensus       144 VV~LlD~FkhsGpNG~HVCMVfEvLGd-nLL-klI~~s~-YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKP  216 (590)
T KOG1290|consen  144 VVQLLDHFKHSGPNGQHVCMVFEVLGD-NLL-KLIKYSN-YRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKP  216 (590)
T ss_pred             eeeeeccceecCCCCcEEEEEehhhhh-HHH-HHHHHhC-CCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCc
Confidence            689999998        4999999955 777 6666554 45799999999999999999999986 999999999

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.92  E-value=4.4e-25  Score=221.21  Aligned_cols=181  Identities=15%  Similarity=0.183  Sum_probs=131.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHH---hCCCCCCCCcC----CC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS---KSGFKPPALKD----KD   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~i~Hrdlkp----~~   69 (302)
                      ||++++.+.    .|+||||+++|+|. ++++      .+++..+..++.|++.||+|||   +.+|+|||+||    ++
T Consensus       745 Iv~~~~~~~~~~~~~lv~Ey~~~g~L~-~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~  817 (968)
T PLN00113        745 IVKLIGLCRSEKGAYLIHEYIEGKNLS-EVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIID  817 (968)
T ss_pred             cceEEEEEEcCCCCEEEEeCCCCCcHH-HHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEEC
Confidence            678888775    58999999999999 7774      3778889999999999999999   66999999999    66


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh----HH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHP----MR  145 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~  145 (302)
                      .++..++. ||.+......    ....++..|+|||++.   +..++.++||||+||++|||++|+.||.....    ..
T Consensus       818 ~~~~~~~~-~~~~~~~~~~----~~~~~t~~y~aPE~~~---~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~  889 (968)
T PLN00113        818 GKDEPHLR-LSLPGLLCTD----TKCFISSAYVAPETRE---TKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIV  889 (968)
T ss_pred             CCCceEEE-eccccccccC----CCccccccccCccccc---CCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHH
Confidence            66666665 5554333221    2336789999999985   66789999999999999999999999853211    11


Q ss_pred             HHHHHHhcCC-----CCCCCC----CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         146 ALFLMSKSGF-----KPPALK----DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       146 ~~~~i~~~~~-----~~~~~~----~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ..........     ..+...    .......++.+++.+||+.+|++||++.++++.+.
T Consensus       890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~  949 (968)
T PLN00113        890 EWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLE  949 (968)
T ss_pred             HHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHH
Confidence            1111000000     001110    01112235778999999999999999999999553

>KOG1094|consensus

Probab=99.91  E-value=6.4e-25  Score=195.67  Aligned_cols=188  Identities=14%  Similarity=0.151  Sum_probs=144.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||+++|...    +|+|+||++.|+|. +++..... ..+.......|+.||+.|++||.+.+++|||+.+    ++.++
T Consensus       597 IveLvGVC~~DePicmI~EYmEnGDLn-qFl~ahea-pt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~  674 (807)
T KOG1094|consen  597 IVELLGVCVQDDPLCMITEYMENGDLN-QFLSAHEL-PTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEF  674 (807)
T ss_pred             eeEEEeeeecCCchHHHHHHHhcCcHH-HHHHhccC-cccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcc
Confidence            455666544    58999999999999 55555430 1234445556999999999999999999999999    99999


Q ss_pred             CEEEecccccccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHH--HhCCCCCCCCChHHHHH
Q psy3574          73 DVKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL--AELQPPMFDLHPMRALF  148 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~el--l~g~~pf~~~~~~~~~~  148 (302)
                      ++||+|||.++.+-.....  ....+-...|||+|.+.   -+.++.++|+|++|+++||+  ++...||..........
T Consensus       675 ~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsil---lgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vve  751 (807)
T KOG1094|consen  675 TIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESIL---LGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVE  751 (807)
T ss_pred             cEEecCcccccccccCCceeeecceeeeeeehhHHHHH---hccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHH
Confidence            9999999999865432111  12335578899999997   56699999999999999996  56889998877766655


Q ss_pred             HHHh---cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSK---SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~---~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....   .+.....+..+.-++..+.+++.+||..+-.+||+++++-.
T Consensus       752 n~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  752 NAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             hhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence            4333   22222234456778999999999999999999999999844

>KOG1167|consensus

Probab=99.91  E-value=1.3e-24  Score=187.27  Aligned_cols=175  Identities=23%  Similarity=0.318  Sum_probs=128.3

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-----CCCCCCEEEeccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-----~~~~~~ikL~DFg~a~~   84 (302)
                      .++|+||++.-+.. +++.      .++..+++.+++.++.||.++|.+||+||||||     ....+.-.|+|||+|..
T Consensus       110 v~ivlp~~~H~~f~-~l~~------~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~  182 (418)
T KOG1167|consen  110 VAIVLPYFEHDRFR-DLYR------SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR  182 (418)
T ss_pred             eEEEecccCccCHH-HHHh------cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHH
Confidence            58999999997777 6665      467789999999999999999999999999999     44557779999999972


Q ss_pred             cccc---------------c-----------------------------ccccccccCcccchhhcccccccCCCCchhh
Q psy3574          85 ITAT---------------I-----------------------------NKRKSFIGTPYWMAPEVAAVERKGGYNQQCD  120 (302)
Q Consensus        85 ~~~~---------------~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~D  120 (302)
                      ....               .                             .......||++|.|||++.  +....+.++|
T Consensus       183 ~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~--k~~~QttaiD  260 (418)
T KOG1167|consen  183 YDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLF--RCPRQTTAID  260 (418)
T ss_pred             HHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHh--hccCcCCccc
Confidence            1000               0                             0011245899999999997  3445678999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHh-------------cCC----------------------------C--
Q psy3574         121 IWAVGITAIELAELQPPMFDLH-PMRALFLMSK-------------SGF----------------------------K--  156 (302)
Q Consensus       121 iwslG~il~ell~g~~pf~~~~-~~~~~~~i~~-------------~~~----------------------------~--  156 (302)
                      |||.||++.-++++..||+... ....+..+..             .+.                            .  
T Consensus       261 iws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~  340 (418)
T KOG1167|consen  261 IWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSR  340 (418)
T ss_pred             eeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccc
Confidence            9999999999999999996432 1111111111             000                            0  


Q ss_pred             ---CCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         157 ---PPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       157 ---~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                         .......+.++..+.+|+.+||..||.+|+|++++|+
T Consensus       341 q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk  380 (418)
T KOG1167|consen  341 QPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK  380 (418)
T ss_pred             ccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence               0000111234568999999999999999999999999

>KOG3653|consensus

Probab=99.90  E-value=1.6e-23  Score=182.70  Aligned_cols=183  Identities=15%  Similarity=0.098  Sum_probs=135.4

Q ss_pred             hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC---------CCCCCCCcC----CCCCCCEE
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS---------GFKPPALKD----KDRCGDVK   75 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---------~i~Hrdlkp----~~~~~~ik   75 (302)
                      .++||+||.+.|+|. ++++.+.    +++.....++..+++||+|||+.         .|+|||||.    +.++++..
T Consensus       282 eywLVt~fh~kGsL~-dyL~~nt----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTcc  356 (534)
T KOG3653|consen  282 EYWLVTEFHPKGSLC-DYLKANT----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCC  356 (534)
T ss_pred             ceeEEeeeccCCcHH-HHHHhcc----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEE
Confidence            478999999999999 9998886    99999999999999999999973         599999999    88999999


Q ss_pred             Eeccccccccccccc--cccccccCcccchhhccccccc---CCCCchhhHHHHHHHHHHHHhCCC------------CC
Q psy3574          76 LADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERK---GGYNQQCDIWAVGITAIELAELQP------------PM  138 (302)
Q Consensus        76 L~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~---~~~~~~~DiwslG~il~ell~g~~------------pf  138 (302)
                      |+|||+|..+.....  .....+||.+|||||++-+.-.   ...-...||||+|.++|||+++..            ||
T Consensus       357 IaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpf  436 (534)
T KOG3653|consen  357 IADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPF  436 (534)
T ss_pred             eeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCch
Confidence            999999988875432  2345789999999999953210   111246899999999999988632            33


Q ss_pred             C---C--CChHHHHHHHHhcCCCCCCCCCC--CCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         139 F---D--LHPMRALFLMSKSGFKPPALKDK--DRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       139 ~---~--~~~~~~~~~i~~~~~~~~~~~~~--~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .   +  ....++...+......|.....+  ..--.-+++.+..||..|++.|+|+.-+.++.+
T Consensus       437 e~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~  501 (534)
T KOG3653|consen  437 EAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMA  501 (534)
T ss_pred             hHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHH
Confidence            2   1  11223333333333222221111  112345789999999999999999988877443

>KOG2052|consensus

Probab=99.90  E-value=3.5e-23  Score=179.46  Aligned_cols=181  Identities=18%  Similarity=0.187  Sum_probs=136.1

Q ss_pred             chheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC--------CCCCCCCcC----CCCCCCEE
Q psy3574           8 FLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS--------GFKPPALKD----KDRCGDVK   75 (302)
Q Consensus         8 ~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~--------~i~Hrdlkp----~~~~~~ik   75 (302)
                      .++|+|++|.+.|+|+ +++++..    ++.+....++..++.||++||-.        .|.|||||.    +.++|...
T Consensus       282 TQLwLvTdYHe~GSL~-DyL~r~t----v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~  356 (513)
T KOG2052|consen  282 TQLWLVTDYHEHGSLY-DYLNRNT----VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC  356 (513)
T ss_pred             EEEEEeeecccCCcHH-HHHhhcc----CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE
Confidence            4579999999999999 9998854    99999999999999999999963        499999999    88999999


Q ss_pred             Eecccccccccccc----ccccccccCcccchhhcccccc-cCCC--CchhhHHHHHHHHHHHHhC----------CCCC
Q psy3574          76 LADFGVSAQITATI----NKRKSFIGTPYWMAPEVAAVER-KGGY--NQQCDIWAVGITAIELAEL----------QPPM  138 (302)
Q Consensus        76 L~DFg~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~-~~~~--~~~~DiwslG~il~ell~g----------~~pf  138 (302)
                      |+|+|+|.......    ...+..+||..|||||++...- ...+  -..+||||||.|+||++.+          ++||
T Consensus       357 IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Py  436 (513)
T KOG2052|consen  357 IADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPY  436 (513)
T ss_pred             EeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCc
Confidence            99999997665432    1245679999999999995210 0111  1468999999999998764          5788


Q ss_pred             CC----CChHHHHHHHHhcCCCCCCCCCCCCCCH---HHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         139 FD----LHPMRALFLMSKSGFKPPALKDKDRWSS---TFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       139 ~~----~~~~~~~~~i~~~~~~~~~~~~~~~~s~---~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+    +...+.+.++.-.+...|..+....-.+   .+..+++.||..||..|.|+-.+-+
T Consensus       437 yd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK  498 (513)
T KOG2052|consen  437 YDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKK  498 (513)
T ss_pred             ccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence            53    3444555554444333333332222233   3556799999999999999877755

>KOG1345|consensus

Probab=99.89  E-value=1.6e-23  Score=171.20  Aligned_cols=169  Identities=20%  Similarity=0.134  Sum_probs=125.4

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC------CCCCCCEEEecccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD------KDRCGDVKLADFGVSA   83 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp------~~~~~~ikL~DFg~a~   83 (302)
                      |++++||++.|+|. .-+...|    +-|.-.+.++.|++.||.|||++++||||||.      ..+..+|||||||...
T Consensus        97 YvF~qE~aP~gdL~-snv~~~G----igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~  171 (378)
T KOG1345|consen   97 YVFVQEFAPRGDLR-SNVEAAG----IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTR  171 (378)
T ss_pred             EEEeeccCccchhh-hhcCccc----ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeeccccc
Confidence            67999999999999 5444444    88999999999999999999999999999999      4455689999999987


Q ss_pred             ccccccccccccccCcccchhhcccccccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHhcCCCCC
Q psy3574          84 QITATINKRKSFIGTPYWMAPEVAAVERKG--GYNQQCDIWAVGITAIELAELQPPMFDLHPM---RALFLMSKSGFKPP  158 (302)
Q Consensus        84 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~--~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~i~~~~~~~~  158 (302)
                      .......   ....+..|.+||++.....+  ...+..|+|.||+++|.+++|.+||......   -........+..+.
T Consensus       172 k~g~tV~---~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~  248 (378)
T KOG1345|consen  172 KVGTTVK---YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPA  248 (378)
T ss_pred             ccCceeh---hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCcc
Confidence            6543322   12345678999987522112  2357899999999999999999999743211   11112222333333


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCCCCCC
Q psy3574         159 ALKDKDRWSSTFHNFVKIALTKNPKKRP  186 (302)
Q Consensus       159 ~~~~~~~~s~~~~~li~~~L~~dp~~R~  186 (302)
                      .......+++.+..+.++-|..++++|-
T Consensus       249 ~P~~F~~fs~~a~r~Fkk~lt~~~~drc  276 (378)
T KOG1345|consen  249 LPKKFNPFSEKALRLFKKSLTPRFKDRC  276 (378)
T ss_pred             CchhhcccCHHHHHHHHHhcCCcccccc
Confidence            3334466899999999999999999993

>KOG1025|consensus

Probab=99.89  E-value=8.4e-23  Score=188.37  Aligned_cols=175  Identities=16%  Similarity=0.140  Sum_probs=147.4

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      ..||++|+++|.|. ++++...  -.+-.+....|..||++|+.|||+++++||||-.    +..-.++|++|||+++.+
T Consensus       772 ~qlvtq~mP~G~Ll-Dyvr~hr--~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll  848 (1177)
T KOG1025|consen  772 LQLVTQLMPLGCLL-DYVREHR--DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLL  848 (1177)
T ss_pred             HHHHHHhcccchHH-HHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhcc
Confidence            57999999999999 6665543  2688889999999999999999999999999999    778889999999999988


Q ss_pred             cccccccccccc--CcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCC
Q psy3574          86 TATINKRKSFIG--TPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKD  162 (302)
Q Consensus        86 ~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  162 (302)
                      ...........|  .+.|||-|.+.   ...|+.++||||+||++||++| |..|+.+....++-..+....    .+..
T Consensus       849 ~~d~~ey~~~~gK~pikwmale~i~---~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ge----RLsq  921 (1177)
T KOG1025|consen  849 APDEKEYSAPGGKVPIKWMALESIR---IRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGE----RLSQ  921 (1177)
T ss_pred             CcccccccccccccCcHHHHHHHhh---ccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccc----cCCC
Confidence            765444333333  45699999985   7789999999999999999998 999999988877766655543    3555


Q ss_pred             CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         163 KDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       163 ~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      +..++.++.-++.+||..|+..||+++++...
T Consensus       922 PpiCtiDVy~~mvkCwmid~~~rp~fkel~~~  953 (1177)
T KOG1025|consen  922 PPICTIDVYMVMVKCWMIDADSRPTFKELAEE  953 (1177)
T ss_pred             CCCccHHHHHHHHHHhccCcccCccHHHHHHH
Confidence            78899999999999999999999999998763

>KOG1024|consensus

Probab=99.89  E-value=3.2e-22  Score=171.16  Aligned_cols=182  Identities=15%  Similarity=0.176  Sum_probs=145.6

Q ss_pred             cchheeEEEecCCcchHHHHHHhcc-----ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEe
Q psy3574           7 HFLQVAAVERKGGYNQQCDIWAVGI-----TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLA   77 (302)
Q Consensus         7 ~~~~~iv~E~~~~g~L~~~~~~~~~-----~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~   77 (302)
                      +-+=++++.++.-|+|. .++....     ....++..++..++.|+..|++|||++||+|.||..    +++..++||+
T Consensus       360 ~~~P~V~y~~~~~gNLK-~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVklt  438 (563)
T KOG1024|consen  360 YATPFVLYPATGVGNLK-SFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLT  438 (563)
T ss_pred             cCcceEEEeccCcchHH-HHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEec
Confidence            33346888999989999 7776321     112466777888999999999999999999999999    8888999999


Q ss_pred             cccccccccccc-ccc-cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcC
Q psy3574          78 DFGVSAQITATI-NKR-KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSG  154 (302)
Q Consensus        78 DFg~a~~~~~~~-~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~  154 (302)
                      |=.+++.+-... .+. ........||++|.+.   ...|+..+|+|||||++|||+| |+.|+...++.+....+..+.
T Consensus       439 DsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~---n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGy  515 (563)
T KOG1024|consen  439 DSALSRDLFPGDYHCLGDNENRPVKWMSLEALQ---NSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGY  515 (563)
T ss_pred             cchhccccCcccccccCCCCCCcccccCHHHHh---hhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccc
Confidence            988887653321 111 1123466799999997   6669999999999999999988 999999999998877776653


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         155 FKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       155 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .    +..+-++++++..++..||...|++||+++++...+-
T Consensus       516 R----laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLs  553 (563)
T KOG1024|consen  516 R----LAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLS  553 (563)
T ss_pred             e----ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence            2    3346789999999999999999999999999987553

>KOG0590|consensus

Probab=99.89  E-value=5.5e-24  Score=199.61  Aligned_cols=175  Identities=19%  Similarity=0.227  Sum_probs=137.7

Q ss_pred             eeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccccc
Q psy3574          11 VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQIT   86 (302)
Q Consensus        11 ~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~   86 (302)
                      +-+||||++ +|+ .++...+   .+...++.-+++|++.||+|||+.||.|||+|+    +...|.+||+|||.+..+.
T Consensus       397 ~~~mE~~~~-Dlf-~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~  471 (601)
T KOG0590|consen  397 LQSMEYCPY-DLF-SLVMSNG---KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFR  471 (601)
T ss_pred             hhhhhcccH-HHH-HHHhccc---ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeec
Confidence            344999999 999 7777765   699999999999999999999999999999999    7888899999999987765


Q ss_pred             cccc----cccccccCcccchhhcccccccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHhc---CCCC
Q psy3574          87 ATIN----KRKSFIGTPYWMAPEVAAVERKGGYN-QQCDIWAVGITAIELAELQPPMFDLHPMRALF-LMSKS---GFKP  157 (302)
Q Consensus        87 ~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~-~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~i~~~---~~~~  157 (302)
                      ..-.    .....+|+..|+|||++.   ...|+ ..+||||+|++++.|.+|+.||.-....+... .....   ....
T Consensus       472 ~~~e~~~~~~~g~~gS~pY~apE~~~---~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~  548 (601)
T KOG0590|consen  472 YPWEKNIHESSGIVGSDPYLAPEVLT---GKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFE  548 (601)
T ss_pred             cCcchhhhhhcCcccCCcCcCccccc---ccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcccccccccc
Confidence            4322    245678999999999996   55564 57899999999999999999996544332221 11110   0011


Q ss_pred             CCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         158 PALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       158 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ........++.+.+.+|.+||+.+|.+|.|+++|++
T Consensus       549 ~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  549 GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            111123456788999999999999999999999999

>KOG0603|consensus

Probab=99.88  E-value=6.7e-24  Score=191.48  Aligned_cols=181  Identities=22%  Similarity=0.228  Sum_probs=151.5

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .+++++|..||+|. .-+....   .+.+...+.+...++.|++++|+.+++|||+|+    ++..|++|+.|||+++..
T Consensus        72 l~l~ld~~rgg~lf-t~l~~~~---~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~  147 (612)
T KOG0603|consen   72 LYLILDFLRGGDLF-TRLSKEV---MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEA  147 (612)
T ss_pred             hhHhhhhcccchhh-hccccCC---chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHh
Confidence            58999999999999 4444444   689999999999999999999999999999999    889999999999999887


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR  165 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  165 (302)
                      ......    |||..|||||++.     ++...+|+||+|+++++|++|..||..    +....|.......     +..
T Consensus       148 v~~~~~----cgt~eymApEI~~-----gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~-----p~~  209 (612)
T KOG0603|consen  148 VKEKIA----CGTYEYRAPEIIN-----GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEM-----PRE  209 (612)
T ss_pred             Hhhhhc----ccchhhhhhHhhh-----ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCC-----chh
Confidence            654322    8999999999984     467899999999999999999999987    5556666654333     366


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHHH
Q psy3574         166 WSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAI  233 (302)
Q Consensus       166 ~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~~  233 (302)
                      ++..+++++..++..+|.+|...                     +..+..+|++|+||....|.....
T Consensus       210 l~~~a~~~~~~l~~r~p~nrLg~---------------------~~~~~~eik~h~f~~~i~~~~l~~  256 (612)
T KOG0603|consen  210 LSAEARSLFRQLFKRNPENRLGA---------------------GPDGVDEIKQHEFFQSIDWNELEA  256 (612)
T ss_pred             hhHHHHHHHHHHHhhCHHHHhcc---------------------CcchhHHHhccchheeeeHhhHhh
Confidence            78999999999999999998754                     334566788899999888775544

>KOG1152|consensus

Probab=99.87  E-value=3.6e-23  Score=184.41  Aligned_cols=131  Identities=25%  Similarity=0.395  Sum_probs=115.1

Q ss_pred             Cchhhhcch----heeEEEecC-CcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKG-GYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~-~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      |+|+.+.|.    |||+||-.. |.+|+ +++..+.   .++|.+++.|++|++.|+++||+.||+|||||-    ++.+
T Consensus       631 IlKlLdfFEddd~yyl~te~hg~gIDLF-d~IE~kp---~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~  706 (772)
T KOG1152|consen  631 ILKLLDFFEDDDYYYLETEVHGEGIDLF-DFIEFKP---RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSN  706 (772)
T ss_pred             hhhhhheeecCCeeEEEecCCCCCcchh-hhhhccC---ccchHHHHHHHHHHHhccccccccCceecccccccEEEecC
Confidence            678888777    689999774 66999 8888887   899999999999999999999999999999999    9999


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCC
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGITAIELAELQPPMFD  140 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~  140 (302)
                      |.+||+|||.|.....+  ....++||..|.|||++.   +..| +..-|||++|++||.++....||.+
T Consensus       707 g~~klidfgsaa~~ksg--pfd~f~gtv~~aapevl~---g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  707 GFVKLIDFGSAAYTKSG--PFDVFVGTVDYAAPEVLG---GEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             CeEEEeeccchhhhcCC--CcceeeeeccccchhhhC---CCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            99999999999776653  455789999999999996   4444 6889999999999999999999864

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.86  E-value=2.1e-21  Score=159.34  Aligned_cols=142  Identities=32%  Similarity=0.488  Sum_probs=121.4

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC-CCCEEEeccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR-CGDVKLADFGVSAQ   84 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~-~~~ikL~DFg~a~~   84 (302)
                      .++++|++.|++|. .++....  ..++...+..++.+++.+|++||+.|++|+||+|    ++. .+.++|+|||.+..
T Consensus        66 ~~~~~e~~~~~~l~-~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~  142 (215)
T cd00180          66 LYLVMEYCEGGSLK-DLLKENE--GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKL  142 (215)
T ss_pred             EEEEEecCCCCcHH-HHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEE
Confidence            48999999999999 7777651  1588999999999999999999999999999999    566 78999999999876


Q ss_pred             cccccccccccccCcccchhhcccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCC
Q psy3574          85 ITATINKRKSFIGTPYWMAPEVAAVERKG-GYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDK  163 (302)
Q Consensus        85 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  163 (302)
                      ............+...|++||...   .. .++.+.|+|++|+++++|                                
T Consensus       143 ~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~~D~~~lg~~~~~l--------------------------------  187 (215)
T cd00180         143 LTSDKSLLKTIVGTPAYMAPEVLL---GKGYYSEKSDIWSLGVILYEL--------------------------------  187 (215)
T ss_pred             ccCCcchhhcccCCCCccChhHhc---ccCCCCchhhhHHHHHHHHHH--------------------------------
Confidence            654321233345788899999985   33 678999999999999999                                


Q ss_pred             CCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         164 DRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       164 ~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                          ..+.+++.+|+..+|++||++.++++
T Consensus       188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~  213 (215)
T cd00180         188 ----PELKDLIRKMLQKDPEKRPSAKEILE  213 (215)
T ss_pred             ----HHHHHHHHHHhhCCcccCcCHHHHhh
Confidence                57899999999999999999999987

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0606|consensus

Probab=99.85  E-value=1.7e-21  Score=184.43  Aligned_cols=161  Identities=24%  Similarity=0.346  Sum_probs=132.7

Q ss_pred             hHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccccccc---------------ccccccccCcccchhhcc
Q psy3574          47 HPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQITATI---------------NKRKSFIGTPYWMAPEVA  107 (302)
Q Consensus        47 qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~  107 (302)
                      +++.+++|||+.||+|||+||    +..-|++|++|||+++...-..               -.....|||+.|.|||++
T Consensus       151 dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVi  230 (1205)
T KOG0606|consen  151 DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVI  230 (1205)
T ss_pred             hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhh
Confidence            348899999999999999999    8888999999999987532110               011345899999999999


Q ss_pred             cccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC
Q psy3574         108 AVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT  187 (302)
Q Consensus       108 ~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t  187 (302)
                      .   -.+|+..+|||++|+++|+.+-|..||+++.+.+.+..++......+..  ...+.++++++|.++|+.+|..|..
T Consensus       231 l---rqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~--dea~p~Ea~dli~~LL~qnp~~Rlg  305 (1205)
T KOG0606|consen  231 L---RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE--DEALPPEAQDLIEQLLRQNPLCRLG  305 (1205)
T ss_pred             h---hhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc--CcCCCHHHHHHHHHHHHhChHhhcc
Confidence            6   6779999999999999999999999999999999998888877666654  3557899999999999999999874


Q ss_pred             HHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHHHHH
Q psy3574         188 ADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIEL  235 (302)
Q Consensus       188 ~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~  235 (302)
                      ..                       ++.++++|+||+.-+|+.+....
T Consensus       306 t~-----------------------ga~evk~h~ff~~LDw~~llRqk  330 (1205)
T KOG0606|consen  306 TG-----------------------GALEVKQHGFFQLLDWKSLLRQK  330 (1205)
T ss_pred             cc-----------------------hhhhhhhccceeecccchhhhhh
Confidence            33                       44457779999998888655433

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.83  E-value=4.8e-20  Score=153.43  Aligned_cols=137  Identities=27%  Similarity=0.301  Sum_probs=112.4

Q ss_pred             heeEEEecCCcchHHHHHHhcccccc-ccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIE-LAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~-l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      .++++||+.+++|. .++....   . +++..+..++.+++.+|.+||+++++|+|++|    ++..+.++|+|||.+..
T Consensus        72 ~~~v~e~~~~~~L~-~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~  147 (225)
T smart00221       72 LYLVMEYCEGGDLF-DYLRKKG---GKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARF  147 (225)
T ss_pred             eEEEEeccCCCCHH-HHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeE
Confidence            58999999999999 7777655   4 88999999999999999999999999999999    77779999999999887


Q ss_pred             ccccc-ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHh
Q psy3574          85 ITATI-NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFD-LHPMRALFLMSK  152 (302)
Q Consensus        85 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~-~~~~~~~~~i~~  152 (302)
                      ..... .......++..|++||.+.  ....++.++|+|+||+++++|++|+.||.. .+..........
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~  215 (225)
T smart00221      148 IHRDLAALLKTVKGTPFYLAPEVLL--GGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWS  215 (225)
T ss_pred             ecCcccccccceeccCCcCCHhHhc--CCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHh
Confidence            65432 1223456788899999984  255677899999999999999999999977 455544444433

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG4158|consensus

Probab=99.78  E-value=1.3e-18  Score=149.59  Aligned_cols=176  Identities=19%  Similarity=0.187  Sum_probs=127.1

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC--------CCCCCCEEEecccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD--------KDRCGDVKLADFGV   81 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp--------~~~~~~ikL~DFg~   81 (302)
                      +|+||.-+.. +|. .++..+.    .+....+.++.|+++|+.|||++||.|||+|.        .|....+.|+|||.
T Consensus       318 lylvMkrY~~-tLr-~yl~~~~----~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGC  391 (598)
T KOG4158|consen  318 LYLVMKRYRQ-TLR-EYLWTRH----RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGC  391 (598)
T ss_pred             EEEehhcchh-hHH-HHHhcCC----CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccce
Confidence            4899999987 999 7777765    77788899999999999999999999999999        34445689999998


Q ss_pred             ccccccc------cccccccccCcccchhhcccccccCC---CCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          82 SAQITAT------INKRKSFIGTPYWMAPEVAAVERKGG---YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        82 a~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~---~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      +---...      .......-|.-.-||||+.....+..   --.++|.|++|.+.||+++...||........-....+
T Consensus       392 cLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq  471 (598)
T KOG4158|consen  392 CLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ  471 (598)
T ss_pred             eeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh
Confidence            6322110      01112334677899999985321111   12578999999999999999999986332221111111


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      ....+   ..++.+++.+++++..+|+.||.+|++..-+-+.
T Consensus       472 e~qLP---alp~~vpp~~rqlV~~lL~r~pskRvsp~iAANv  510 (598)
T KOG4158|consen  472 ESQLP---ALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANV  510 (598)
T ss_pred             hhhCC---CCcccCChHHHHHHHHHhcCCccccCCccHHHhH
Confidence            11122   2357789999999999999999999997654443

>KOG1033|consensus

Probab=99.76  E-value=3.6e-19  Score=158.18  Aligned_cols=170  Identities=18%  Similarity=0.182  Sum_probs=126.5

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .||.|++|.-.+|. +++..+......+......++.|+..|+.|   +|.+|||+||    ...+.++||.|||+....
T Consensus       331 lyI~Mn~c~~~tle-dWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~  406 (516)
T KOG1033|consen  331 LYIQMNLCEKETLE-DWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ  406 (516)
T ss_pred             hhhhhhhhhhhhHH-HHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence            57999999999999 898766544456677888999999999999   9999999999    445668999999998766


Q ss_pred             cccc------ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCC
Q psy3574          86 TATI------NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPP  158 (302)
Q Consensus        86 ~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~  158 (302)
                      ....      ......+||..||+||.+.   +..|+.++||||||++|+|++. -...+.   ....+.-+..+. -+|
T Consensus       407 ~~~~~~~~~~a~~t~~~gt~~YmsPEQi~---g~~y~~kvdIyaLGlil~EL~~~f~T~~e---r~~t~~d~r~g~-ip~  479 (516)
T KOG1033|consen  407 DKDETVAPAAASHTQQVGTLLYMSPEQIR---GQQYSEKVDIYALGLILAELLIQFSTQFE---RIATLTDIRDGI-IPP  479 (516)
T ss_pred             ccCCcccchhhhhhhcccccccCCHHHHh---hhhhhhhcchhhHHHHHHHHHHHhccHHH---HHHhhhhhhcCC-CCh
Confidence            5543      2345568999999999995   7889999999999999999987 222221   112222222222 222


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         159 ALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       159 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...  .. .+.-.+|+.+||...|.+||++.+.--
T Consensus       480 ~~~--~d-~p~e~~ll~~lls~~p~~RP~~~~~~~  511 (516)
T KOG1033|consen  480 EFL--QD-YPEEYTLLQQLLSPSPEERPSAIEVAL  511 (516)
T ss_pred             HHh--hc-CcHHHHHHHHhcCCCcccCchHHHHhh
Confidence            211  11 345679999999999999996655444

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.75  E-value=3.9e-17  Score=142.64  Aligned_cols=183  Identities=25%  Similarity=0.253  Sum_probs=137.6

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC-CEEEeccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG-DVKLADFGVSAQ   84 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~-~ikL~DFg~a~~   84 (302)
                      .+++++++.++++. .++........+.+..+..++.|++.++.|+|+.+++|||+||    ++..+ .++++|||.+..
T Consensus        73 ~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~  151 (384)
T COG0515          73 LYLVMEYVDGGSLE-DLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKL  151 (384)
T ss_pred             EEEEEecCCCCcHH-HHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCccee
Confidence            38999999999999 7776552111588999999999999999999999999999999    55566 699999999986


Q ss_pred             cccccc------cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhcC
Q psy3574          85 ITATIN------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHP----MRALFLMSKSG  154 (302)
Q Consensus        85 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~i~~~~  154 (302)
                      ......      .....+|+..|++||.+.+.....+....|+|++|++++++++|..||.....    ......+....
T Consensus       152 ~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  231 (384)
T COG0515         152 LPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELP  231 (384)
T ss_pred             cCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcC
Confidence            554322      23566899999999999621004678899999999999999999999876653    33333333332


Q ss_pred             CCCCCCCCCCCC----CHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         155 FKPPALKDKDRW----SSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       155 ~~~~~~~~~~~~----s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ............    ...+.+++..++..+|..|.+..+...
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~  274 (384)
T COG0515         232 TPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS  274 (384)
T ss_pred             CcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence            220111111111    257899999999999999999998877

>KOG1164|consensus

Probab=99.73  E-value=9.6e-17  Score=141.58  Aligned_cols=180  Identities=15%  Similarity=0.118  Sum_probs=131.9

Q ss_pred             hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC-----CCCEEEecc
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR-----CGDVKLADF   79 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~-----~~~ikL~DF   79 (302)
                      +.||||+.+ |.+|. ++..... ...++..++..++.|++.+|.+||+.|++||||||    +..     ...+.|.||
T Consensus        95 ~~~iVM~l~-G~sL~-dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDf  171 (322)
T KOG1164|consen   95 FNFIVMSLL-GPSLE-DLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDF  171 (322)
T ss_pred             eeEEEEecc-CccHH-HHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEec
Confidence            358999977 55999 7775544 34799999999999999999999999999999999    222     256999999


Q ss_pred             cccc--ccccccc-------c-ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          80 GVSA--QITATIN-------K-RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        80 g~a~--~~~~~~~-------~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      |+++  .......       . ...+.||..|+++.+..   +...+...|+||++.++.++..|..||...........
T Consensus       172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~---~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~  248 (322)
T KOG1164|consen  172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHL---GIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSK  248 (322)
T ss_pred             CCCccccccCCCCcccccCCCCccCCCCccccccHHHhC---CCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHH
Confidence            9998  3222111       1 22456999999999875   66678999999999999999999999976654333332


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      .................+..+..+...+-..+...+|....+...
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~  293 (322)
T KOG1164|consen  249 FEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL  293 (322)
T ss_pred             HHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence            222211111100123345677788777777899999999888773

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.72  E-value=4.7e-18  Score=144.55  Aligned_cols=162  Identities=19%  Similarity=0.198  Sum_probs=104.5

Q ss_pred             heeEEEecCCcchHHHHHHh----ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAV----GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGV   81 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~----~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~   81 (302)
                      ++++|+-+.+ +|. .++..    ......+.......+..|+++.+++||+.|++|+||+|    ++.+|.++|+||+.
T Consensus       114 ~~~l~P~~~~-dL~-~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~  191 (288)
T PF14531_consen  114 RFLLMPRAQG-DLQ-DLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSS  191 (288)
T ss_dssp             EEEEEE--SE-EHH-HHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGG
T ss_pred             hhhccchhhh-cHH-HHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHH
Confidence            3678887765 887 66543    11111233333455669999999999999999999999    88999999999998


Q ss_pred             ccccccccccccccccCcccchhhccccc-----ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC
Q psy3574          82 SAQITATINKRKSFIGTPYWMAPEVAAVE-----RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFK  156 (302)
Q Consensus        82 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~  156 (302)
                      ..........   ...+..|.+||.....     ....++.+.|.|+||+++|.|+||..||...........       
T Consensus       192 ~~r~g~~~~~---~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~-------  261 (288)
T PF14531_consen  192 LVRAGTRYRC---SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW-------  261 (288)
T ss_dssp             EEETTEEEEG---GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG-------
T ss_pred             HeecCceeec---cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc-------
Confidence            7665543221   2345789999987522     123468899999999999999999999976533221111       


Q ss_pred             CCCCCCCCCCCHHHHHHHHHhhhcCCCCC
Q psy3574         157 PPALKDKDRWSSTFHNFVKIALTKNPKKR  185 (302)
Q Consensus       157 ~~~~~~~~~~s~~~~~li~~~L~~dp~~R  185 (302)
                        .+....+++..++.||..+|+.||.+|
T Consensus       262 --~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  262 --DFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             --GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             --cchhcCCcCHHHHHHHHHHccCCcccC
Confidence              222234678999999999999999987

>KOG1023|consensus

Probab=99.68  E-value=6.7e-17  Score=145.98  Aligned_cols=192  Identities=20%  Similarity=0.226  Sum_probs=139.4

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCC-CCCCCcC----CCCCC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF-KPPALKD----KDRCG   72 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i-~Hrdlkp----~~~~~   72 (302)
                      .||+|...    .++|.+||..|+|+ +++....  ..++.-....++++|+.||+|+|...| .|+.++.    ++...
T Consensus        10 ~~f~g~~~~~~~~~~i~~~c~rGsl~-D~i~~~~--~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w   86 (484)
T KOG1023|consen   10 NKFIGASVDGPEMIVIWEYCSRGSLL-DILSNED--IKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRW   86 (484)
T ss_pred             hhheeeEecCCceEEEEeeecCccHH-hHHhccc--cCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeE
Confidence            45666555    48999999999999 7776633  368888888999999999999999866 9999999    88899


Q ss_pred             CEEEeccccccccccc--cccccccccCcccchhhcccccccCC----CCchhhHHHHHHHHHHHHhCCCCCCCC----C
Q psy3574          73 DVKLADFGVSAQITAT--INKRKSFIGTPYWMAPEVAAVERKGG----YNQQCDIWAVGITAIELAELQPPMFDL----H  142 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~----~~~~~DiwslG~il~ell~g~~pf~~~----~  142 (302)
                      .+||+|||+.......  ............|.|||.+.......    .+.++|+||+|++++|+++...||...    .
T Consensus        87 ~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~  166 (484)
T KOG1023|consen   87 VLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVED  166 (484)
T ss_pred             EEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCC
Confidence            9999999998766421  01111112345699999996431122    367899999999999999999999752    2


Q ss_pred             hHHHHHHHHhcCCCCCC--CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         143 PMRALFLMSKSGFKPPA--LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       143 ~~~~~~~i~~~~~~~~~--~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      +.+....+...+..+..  ........+++..++.+||..+|.+||+++.+-..+.
T Consensus       167 ~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~  222 (484)
T KOG1023|consen  167 PDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLL  222 (484)
T ss_pred             hHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhh
Confidence            33444444442222221  1111245668999999999999999999999866443

>KOG1240|consensus

Probab=99.65  E-value=8.2e-17  Score=153.46  Aligned_cols=174  Identities=17%  Similarity=0.130  Sum_probs=120.1

Q ss_pred             eeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccccc
Q psy3574          11 VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQIT   86 (302)
Q Consensus        11 ~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~   86 (302)
                      |+|-+|+.. +|+ +.+..+.   -|..-+.+.|+.||+.||..||..||+|+|||.    +..-.-+.|+||...+..-
T Consensus        97 ylvRqyvkh-nLy-DRlSTRP---FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtY  171 (1431)
T KOG1240|consen   97 YLVRQYVKH-NLY-DRLSTRP---FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTY  171 (1431)
T ss_pred             HHHHHHHhh-hhh-hhhccch---HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCcc
Confidence            788888887 888 6665544   688889999999999999999999999999999    6666778999998776532


Q ss_pred             cccc---ccc----ccccCcccchhhcccccc-------cCC-CCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          87 ATIN---KRK----SFIGTPYWMAPEVAAVER-------KGG-YNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        87 ~~~~---~~~----~~~gt~~y~aPE~~~~~~-------~~~-~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      -...   ...    +...-..|+|||-+....       ... .+++.||||+||+++|+++ |++||.-.    .+-..
T Consensus       172 LPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS----QL~aY  247 (1431)
T KOG1240|consen  172 LPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS----QLLAY  247 (1431)
T ss_pred             CCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH----HHHhH
Confidence            1111   111    112334699999985210       111 4578999999999999987 67877421    11111


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...+...+......--+..++++|..|++.||.+|.++++.|+
T Consensus       248 r~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~  290 (1431)
T KOG1240|consen  248 RSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQ  290 (1431)
T ss_pred             hccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHH
Confidence            1110000000000011446899999999999999999999998

>KOG0195|consensus

Probab=99.61  E-value=3.8e-15  Score=122.61  Aligned_cols=172  Identities=20%  Similarity=0.271  Sum_probs=127.0

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCC-CCCC---CCcC--CCCCCCEEE--ecccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG-FKPP---ALKD--KDRCGDVKL--ADFGV   81 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-i~Hr---dlkp--~~~~~~ikL--~DFg~   81 (302)
                      ..++..||+.|+|+ .+++.+. +..++..++..++.++++|++|||+.. ++.|   +-+-  ++++.+.+|  +|--+
T Consensus       262 lv~isq~mp~gsly-nvlhe~t-~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kf  339 (448)
T KOG0195|consen  262 LVIISQYMPFGSLY-NVLHEQT-SVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKF  339 (448)
T ss_pred             ceEeeeeccchHHH-HHHhcCc-cEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheeccccee
Confidence            36899999999999 7776553 456888999999999999999999973 3322   2111  333333222  23222


Q ss_pred             ccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCC
Q psy3574          82 SAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK  161 (302)
Q Consensus        82 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  161 (302)
                      +.       ........+.||+||.++.......-.++|+|||+++++|+.|+..||.+..+.+.-.++.-.+...   .
T Consensus       340 sf-------qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv---~  409 (448)
T KOG0195|consen  340 SF-------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRV---H  409 (448)
T ss_pred             ee-------eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccc---c
Confidence            11       1112345789999999973222222367999999999999999999999999999888887766443   3


Q ss_pred             CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         162 DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       162 ~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+..++..+..|++-|++.||.+||.+..+.-
T Consensus       410 ippgis~hm~klm~icmnedpgkrpkfdmivp  441 (448)
T KOG0195|consen  410 IPPGISRHMNKLMNICMNEDPGKRPKFDMIVP  441 (448)
T ss_pred             CCCCccHHHHHHHHHHhcCCCCcCCCcceehh
Confidence            46778999999999999999999999887654

>KOG0606|consensus

Probab=99.61  E-value=2.3e-15  Score=143.38  Aligned_cols=195  Identities=19%  Similarity=0.231  Sum_probs=158.8

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .++|++|+.|++|. ..++..+   ..+++-++.++..+..++++||...++|||++|    ....|+.+++|||.....
T Consensus       879 ~~L~~~~~~~~~~~-Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v  954 (1205)
T KOG0606|consen  879 LPLVGHYLNGGDLP-SKLHNSG---CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV  954 (1205)
T ss_pred             cchhhHHhccCCch-hhhhcCC---CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccccc
Confidence            47999999999999 7777776   799999999999999999999999999999999    567899999999843321


Q ss_pred             cc------c-------------------------cccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhC
Q psy3574          86 TA------T-------------------------INKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAEL  134 (302)
Q Consensus        86 ~~------~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g  134 (302)
                      ..      .                         ........||+.|.+||.+.   +......+|+|++|+++++.++|
T Consensus       955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~l---g~~hgs~ad~~~~g~~l~e~l~g 1031 (1205)
T KOG0606|consen  955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILL---GRRHGSAADWWSSGVCLFEVLTG 1031 (1205)
T ss_pred             ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccc---cccCCCcchhhhhhhhhhhhhcC
Confidence            10      0                         00123356899999999997   66678999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCC
Q psy3574         135 QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQ  214 (302)
Q Consensus       135 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~  214 (302)
                      .+||....+...+..+.......+.  .+...+..+++++...|..+|.+|..+.                       +.
T Consensus      1032 ~pp~na~tpq~~f~ni~~~~~~~p~--g~~~~s~~aq~~~~~ll~~~~~qr~~a~-----------------------~~ 1086 (1205)
T KOG0606|consen 1032 IPPFNAETPQQIFENILNRDIPWPE--GPEEGSYEAQDLINRLLTEEPTQRLGAK-----------------------GA 1086 (1205)
T ss_pred             CCCCCCcchhhhhhccccCCCCCCC--CccccChhhhhhhhhhhccCchhccCcc-----------------------cc
Confidence            9999999999988888776554443  3456789999999999999999998763                       44


Q ss_pred             ccccCCCccccchhhHHHHHHh
Q psy3574         215 CDIWAHPFFKYDMSKRVAIELL  236 (302)
Q Consensus       215 ~~i~~hp~f~~~~~~~~~~~~~  236 (302)
                      .+.+.|+||+...|..+.....
T Consensus      1087 ~e~k~~~~~~~~~~~~l~~q~~ 1108 (1205)
T KOG0606|consen 1087 AEVKGHPFFQDVDWENLALQKA 1108 (1205)
T ss_pred             cccccCCccCCCCccccccccC
Confidence            5667799999988876654433

>KOG1165|consensus

Probab=99.60  E-value=5e-15  Score=124.97  Aligned_cols=174  Identities=13%  Similarity=0.163  Sum_probs=139.1

Q ss_pred             eeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---------CCCCCCEEEecccc
Q psy3574          11 VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---------KDRCGDVKLADFGV   81 (302)
Q Consensus        11 ~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---------~~~~~~ikL~DFg~   81 (302)
                      .+|+|++ |-+|+ +++.-++  ..|+.+++..++.|++.-++|+|++.+|.|||||         ......|.++|||+
T Consensus       100 iLVidLL-GPSLE-DLFD~Cg--R~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGm  175 (449)
T KOG1165|consen  100 ILVIDLL-GPSLE-DLFDLCG--RRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGM  175 (449)
T ss_pred             hhhhhhh-CcCHH-HHHHHhc--CcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccc
Confidence            4899988 56999 9999887  4699999999999999999999999999999999         33445689999999


Q ss_pred             cccccccccc-------ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC---ChHHHHHHHH
Q psy3574          82 SAQITATINK-------RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL---HPMRALFLMS  151 (302)
Q Consensus        82 a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~---~~~~~~~~i~  151 (302)
                      |+...+..+.       ..+..||..||+--.-+   +..-+...|+=|||.++.+.+.|.+||.+.   +.++...+|-
T Consensus       176 AK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHl---GrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIG  252 (449)
T KOG1165|consen  176 AKEYRDPKTKQHIPYREHKSLSGTARYMSINTHL---GREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIG  252 (449)
T ss_pred             hhhhcCccccccCccccccccccceeeeEeeccc---cchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhc
Confidence            9988775443       34567999999987765   556678899999999999999999999864   4556666666


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL  191 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~l  191 (302)
                      ......+.......++.++..-++-.=.++-.+-|..+-+
T Consensus       253 e~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdyl  292 (449)
T KOG1165|consen  253 ETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYL  292 (449)
T ss_pred             cccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHH
Confidence            6555555444456678888888777767777777876543

>KOG0590|consensus

Probab=99.56  E-value=3.6e-16  Score=147.10  Aligned_cols=179  Identities=18%  Similarity=0.178  Sum_probs=139.1

Q ss_pred             heeEEEecCCcchHHHHH-HhccccccccccchhHHHhhHHHHHHHHH-hCCCCCCCCcC----CCCCC-CEEEeccccc
Q psy3574          10 QVAAVERKGGYNQQCDIW-AVGITAIELAELQPPMFDLHPMRALFLMS-KSGFKPPALKD----KDRCG-DVKLADFGVS   82 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~-~~~~~~~~l~~~~~~~i~~qi~~aL~~lH-~~~i~Hrdlkp----~~~~~-~ikL~DFg~a   82 (302)
                      +++++||..||++. ..+ ....  ...+...+..++.|+..++.|+| ..++.|||++|    ++..+ .+|+.|||+|
T Consensus        96 ~~~~~~~s~g~~~f-~~i~~~~~--~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~A  172 (601)
T KOG0590|consen   96 YLLSLSYSDGGSLF-SKISHPDS--TGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLA  172 (601)
T ss_pred             cccccCcccccccc-cccccCCc--cCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhh
Confidence            47999999999999 544 2221  14788899999999999999999 99999999999    77778 9999999999


Q ss_pred             ccccc-ccc--ccccccc-CcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC
Q psy3574          83 AQITA-TIN--KRKSFIG-TPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP  158 (302)
Q Consensus        83 ~~~~~-~~~--~~~~~~g-t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~  158 (302)
                      ..... ...  .....+| ++.|+|||...+  ........|+||+|+++.-+++|..|+.........+.-........
T Consensus       173 t~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~--~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  250 (601)
T KOG0590|consen  173 TAYRNKNGAERSLKDRCGSSPPYGAPEHLSG--KAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRF  250 (601)
T ss_pred             ccccccCCcceeeecccCCCCCCCCcccccc--hhhcCCCcccccccccccccccCCCCccccccccccceeeccccccc
Confidence            87766 222  2345578 999999999962  13446889999999999999999999976554443322222221121


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         159 ALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       159 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+..++....+++.+++..+|..|.+.+++-.
T Consensus       251 ~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  251 TQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             ccCccccCChhhhhcccccccCCchhccccccccc
Confidence            23335678899999999999999999999998888

>KOG1163|consensus

Probab=99.55  E-value=1.9e-14  Score=116.54  Aligned_cols=175  Identities=13%  Similarity=0.168  Sum_probs=135.2

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-------CCCCCCEEEeccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-------KDRCGDVKLADFGVS   82 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-------~~~~~~ikL~DFg~a   82 (302)
                      ..+||+++ |.+|+ ++++...  ..++..++..++-|++.-++|+|.++++||||||       --....+-|+|||+|
T Consensus        86 nvlVMdLL-GPsLE-dLfnfC~--R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLa  161 (341)
T KOG1163|consen   86 NVLVMDLL-GPSLE-DLFNFCS--RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLA  161 (341)
T ss_pred             ceeeeecc-CccHH-HHHHHHh--hhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccch
Confidence            36999988 56999 9998776  3688899999999999999999999999999999       234567899999999


Q ss_pred             ccccccccc-------ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHh
Q psy3574          83 AQITATINK-------RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM---RALFLMSK  152 (302)
Q Consensus        83 ~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~i~~  152 (302)
                      +..-+..+.       .....||..|.+--...   +...+...|+=|+|.++.+...|..||.+....   ....+|..
T Consensus       162 Kky~d~~t~~HIpyre~r~ltGTaRYASinAh~---g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~E  238 (341)
T KOG1163|consen  162 KKYRDIRTRQHIPYREDRNLTGTARYASINAHL---GIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISE  238 (341)
T ss_pred             hhhccccccccCccccCCccceeeeehhhhhhh---hhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHH
Confidence            987654322       23456899998766654   334567889999999999999999999886544   33344555


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL  191 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~l  191 (302)
                      .....+.......++.++.-.+.-|=..--++-|...-+
T Consensus       239 kK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~yl  277 (341)
T KOG1163|consen  239 KKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYL  277 (341)
T ss_pred             hhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHH
Confidence            555555444567788999999998888777788875543

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.55  E-value=1.2e-14  Score=118.00  Aligned_cols=128  Identities=12%  Similarity=0.031  Sum_probs=90.9

Q ss_pred             chhhhcchheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCC-cC----CCCCCCEEE
Q psy3574           2 SRVFNHFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL-KD----KDRCGDVKL   76 (302)
Q Consensus         2 v~~~~~~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdl-kp----~~~~~~ikL   76 (302)
                      .+++++...|++|||+.|.+|. .....         . ...++.|++.+|.+||++||+|||| ||    ++.+|.++|
T Consensus        65 P~ll~~~~~~lvmeyI~G~~L~-~~~~~---------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~L  133 (218)
T PRK12274         65 PRLLHWDGRHLDRSYLAGAAMY-QRPPR---------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAV  133 (218)
T ss_pred             CEEEEEcCEEEEEeeecCccHH-hhhhh---------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEE
Confidence            3444555568999999998887 43221         1 1357889999999999999999999 67    677899999


Q ss_pred             ecccccccccccccc-------------ccccccCcccchhhcccccccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCC
Q psy3574          77 ADFGVSAQITATINK-------------RKSFIGTPYWMAPEVAAVERKGGYN-QQCDIWAVGITAIELAELQPPMFDLH  142 (302)
Q Consensus        77 ~DFg~a~~~~~~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~-~~~DiwslG~il~ell~g~~pf~~~~  142 (302)
                      +|||+|.........             ......++.|+.|+--...  ...+ ...++++.|+.+|.++||..+..++.
T Consensus       134 IDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l--~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        134 IDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVL--KRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             EECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhh--ccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence            999999854432210             0112257778888764311  1122 45678899999999999999876543

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.52  E-value=1.2e-14  Score=128.90  Aligned_cols=96  Identities=14%  Similarity=0.097  Sum_probs=73.8

Q ss_pred             hhhhcchheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCC-cC----CCCCCCEEEe
Q psy3574           3 RVFNHFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL-KD----KDRCGDVKLA   77 (302)
Q Consensus         3 ~~~~~~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdl-kp----~~~~~~ikL~   77 (302)
                      ++++....|+||||++|++|. .. ..      ..   ...++.|++.||.|||++||+|||| ||    ++.++.+||+
T Consensus        86 ~l~~~~~~~LVmE~~~G~~L~-~~-~~------~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLi  154 (365)
T PRK09188         86 QLLATGKDGLVRGWTEGVPLH-LA-RP------HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVI  154 (365)
T ss_pred             EEEEcCCcEEEEEccCCCCHH-Hh-Cc------cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEE
Confidence            455666679999999999997 32 11      11   1467899999999999999999999 99    6678899999


Q ss_pred             cccccccccccccc--------ccccccCcccchhhcccc
Q psy3574          78 DFGVSAQITATINK--------RKSFIGTPYWMAPEVAAV  109 (302)
Q Consensus        78 DFg~a~~~~~~~~~--------~~~~~gt~~y~aPE~~~~  109 (302)
                      |||+|+.+......        .....++..|+|||.+.-
T Consensus       155 DFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        155 DFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             ECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            99999876543211        134567888999999863

>KOG1166|consensus

Probab=99.39  E-value=8.6e-13  Score=127.67  Aligned_cols=119  Identities=17%  Similarity=0.097  Sum_probs=103.4

Q ss_pred             eeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-----------CCCCCCEEEecc
Q psy3574          11 VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-----------KDRCGDVKLADF   79 (302)
Q Consensus        11 ~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-----------~~~~~~ikL~DF   79 (302)
                      ++|+||.+-|+|. ++++...   .+++..+.++..|++..++.||..+|||+||||           ......++|+||
T Consensus       770 ~lv~ey~~~Gtll-d~~N~~~---~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf  845 (974)
T KOG1166|consen  770 VLVSEYSPYGTLL-DLINTNK---VMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDF  845 (974)
T ss_pred             eeeeeccccccHH-HhhccCC---CCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEec
Confidence            6999999999999 9998666   899999999999999999999999999999999           333566999999


Q ss_pred             ccccccccc--cccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCC
Q psy3574          80 GVSAQITAT--INKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQP  136 (302)
Q Consensus        80 g~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~  136 (302)
                      |.+--+...  .......++|-.+-++|+..   ++.+++.+|.|.|+.++|-|+.|+.
T Consensus       846 G~siDm~lfp~~~~F~~~~~td~f~C~EM~~---grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  846 GRSIDMKLFPDGTKFKAVWHTDLFDCIEMRE---GRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             ccceeeeEcCCCcEEeeeeccccchhHHHhc---CCCCchhhhhHHHHHHHHHHHHHHH
Confidence            998665432  23445667899999999995   8889999999999999999999965

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.38  E-value=4.5e-13  Score=109.00  Aligned_cols=72  Identities=14%  Similarity=0.131  Sum_probs=60.1

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHH-HhCCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM-SKSGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~l-H~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      .||||||++|+++. .......   ++++..+..++.|++.+|.+| |+.||+||||||    ++ ++.++|+|||+|..
T Consensus        92 ~~iVmE~i~g~~l~-~~~~~~~---~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~  166 (190)
T cd05147          92 HVLVMEFIGDDGWA-APRLKDA---PLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVE  166 (190)
T ss_pred             CEEEEEEeCCCCCc-chhhhcC---CCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEcccccc
Confidence            37999999998876 3333334   688999999999999999999 799999999999    44 58899999999865


Q ss_pred             cc
Q psy3574          85 IT   86 (302)
Q Consensus        85 ~~   86 (302)
                      ..
T Consensus       167 ~~  168 (190)
T cd05147         167 HD  168 (190)
T ss_pred             CC
Confidence            43

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.35  E-value=4.5e-13  Score=110.87  Aligned_cols=94  Identities=13%  Similarity=0.165  Sum_probs=69.6

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .++||||++|.+|. ++.       .+++    ....+++.+|..||..|++|||++|    ++.+| ++|+|||.....
T Consensus       118 ~~lvmEyi~G~tL~-~~~-------~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~  184 (232)
T PRK10359        118 YIMLIEYIEGVELN-DMP-------EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCT  184 (232)
T ss_pred             eEEEEEEECCccHH-Hhh-------hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccc
Confidence            57999999999998 552       2332    3466999999999999999999999    66677 999999987654


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHH
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL  131 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~el  131 (302)
                      ......            ..+++   ...|+.++|+|+||+.+...
T Consensus       185 ~e~~a~------------d~~vl---er~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        185 AQRKAK------------DRIDL---ERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             cchhhH------------HHHHH---HhHhcccccccceeEeehHH
Confidence            321111            00222   34467889999999987754

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.34  E-value=1.4e-12  Score=106.32  Aligned_cols=73  Identities=12%  Similarity=0.119  Sum_probs=61.1

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh-CCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK-SGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      .|+||||++|+++....+.. .   .+++..+..++.|++.+|.+||+ +||+||||||    ++ ++.++|+|||++..
T Consensus        92 ~~lVmE~~~g~~~~~~~l~~-~---~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~  166 (190)
T cd05145          92 NVLVMEFIGDDGSPAPRLKD-V---PLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVE  166 (190)
T ss_pred             CEEEEEEecCCCchhhhhhh-c---cCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEccccee
Confidence            37999999998665243433 3   58888999999999999999999 9999999999    55 78999999999876


Q ss_pred             ccc
Q psy3574          85 ITA   87 (302)
Q Consensus        85 ~~~   87 (302)
                      ...
T Consensus       167 ~~~  169 (190)
T cd05145         167 LDH  169 (190)
T ss_pred             cCC
Confidence            543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1266|consensus

Probab=99.25  E-value=8.8e-12  Score=105.55  Aligned_cols=172  Identities=15%  Similarity=0.101  Sum_probs=114.2

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC--CCCCCCCcC----CCCCCCEEEecccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS--GFKPPALKD----KDRCGDVKLADFGVSA   83 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~--~i~Hrdlkp----~~~~~~ikL~DFg~a~   83 (302)
                      ..+++||+..|+|.+.+.+.+.....+.....++|+.||+.||.|||+.  -|+|+++..    +..+|-||+.--.- .
T Consensus       147 viFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap-~  225 (458)
T KOG1266|consen  147 VIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAP-D  225 (458)
T ss_pred             eEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCc-c
Confidence            3699999999999944444444345788899999999999999999998  499999988    66778777643110 0


Q ss_pred             ccccccc-----cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcCCCC
Q psy3574          84 QITATIN-----KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM-RALFLMSKSGFKP  157 (302)
Q Consensus        84 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~  157 (302)
                      .......     ......+-++|.+||.=.   ....+.++|||++|+...+|.-+..--...... ..-..+.+.-+..
T Consensus       226 s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~---~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~l  302 (458)
T KOG1266|consen  226 STHPSVNSTREAEKSVNTSLPGFSAPESGT---TTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGL  302 (458)
T ss_pred             ccchhhhhhhHhhhhccccCCccccCCcCc---ccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeec
Confidence            0111000     011123567889998753   344567899999999999998876542222111 1111111111100


Q ss_pred             CCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         158 PALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       158 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                              -...-++++.+||+-.|..||++.+++.
T Consensus       303 --------en~lqr~~i~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  303 --------ENGLQRGSITKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             --------cCccccCcCcccccCCCCCCcchhhhhc
Confidence                    0123467889999999999999999999

>PRK10345 hypothetical protein; Provisional

Probab=99.15  E-value=4.8e-11  Score=98.22  Aligned_cols=75  Identities=9%  Similarity=-0.084  Sum_probs=57.4

Q ss_pred             Cchhhhcchh--------eeEEEe--cCCcchHHHHHHhccccccccccchhHHHhhHHHHH-HHHHhCCCCCCCCcC--
Q psy3574           1 MSRVFNHFLQ--------VAAVER--KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRAL-FLMSKSGFKPPALKD--   67 (302)
Q Consensus         1 iv~~~~~~~~--------~iv~E~--~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL-~~lH~~~i~Hrdlkp--   67 (302)
                      |++|||.+..        .+|+||  +.+|+|. ++++..    .+++.  ..++.|++.++ +|||+++|+||||||  
T Consensus        63 Ivr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~-~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~N  135 (210)
T PRK10345         63 IPRYYGTVETDCGTGYVYDVIADFDGKPSITLT-EFAEQC----RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQN  135 (210)
T ss_pred             cceeeEEEEeCCCCeEEEEEEecCCCCcchhHH-HHHHcc----cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHH
Confidence            6788887662        278999  5589999 788653    36655  46688888888 999999999999999  


Q ss_pred             --CC----CCCCEEEeccccc
Q psy3574          68 --KD----RCGDVKLADFGVS   82 (302)
Q Consensus        68 --~~----~~~~ikL~DFg~a   82 (302)
                        ++    ..+.++|+||+.+
T Consensus       136 ILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        136 ILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             EEEeccCCCCCcEEEEECCCC
Confidence              32    3458999995443

>smart00090 RIO RIO-like kinase

Probab=99.15  E-value=2.4e-11  Score=102.29  Aligned_cols=73  Identities=18%  Similarity=0.132  Sum_probs=60.3

Q ss_pred             hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCC-CCCCCCcC----CCCCCCEEEecccccc
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG-FKPPALKD----KDRCGDVKLADFGVSA   83 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-i~Hrdlkp----~~~~~~ikL~DFg~a~   83 (302)
                      ..|+||||++|++|. .......   .+.+..+..++.|++.+|.+||++| ++|||+||    ++ .+.++|+|||.+.
T Consensus       122 ~~~lV~E~~~g~~L~-~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~  196 (237)
T smart00090      122 RNVLVMEFIGGDGLP-APRLKDV---EPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSV  196 (237)
T ss_pred             CceEEEEEecCCccc-ccccccC---CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhh
Confidence            458999999998887 4432333   5666778899999999999999999 99999999    55 7899999999986


Q ss_pred             ccc
Q psy3574          84 QIT   86 (302)
Q Consensus        84 ~~~   86 (302)
                      ...
T Consensus       197 ~~~  199 (237)
T smart00090      197 ELD  199 (237)
T ss_pred             ccC
Confidence            544

>KOG2137|consensus

Probab=99.09  E-value=1.7e-11  Score=113.21  Aligned_cols=184  Identities=15%  Similarity=0.145  Sum_probs=132.9

Q ss_pred             ccchhHHHhhHHHHHHHHHhC-CCCCCCCcC----CCCCCCEEEeccccccccccccccc---------cccccCcccch
Q psy3574          38 ELQPPMFDLHPMRALFLMSKS-GFKPPALKD----KDRCGDVKLADFGVSAQITATINKR---------KSFIGTPYWMA  103 (302)
Q Consensus        38 ~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~~~---------~~~~gt~~y~a  103 (302)
                      -+....=+.++..|+.|+|.. ++||++|.|    ++..|.+||+.|+++..........         ....-...|.|
T Consensus        98 Te~~f~nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~a  177 (700)
T KOG2137|consen   98 TEDGFANLGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLA  177 (700)
T ss_pred             ccHhhhhhhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCccccc
Confidence            334444556667999999987 899999999    8899999999999987655421110         01123456999


Q ss_pred             hhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCC
Q psy3574         104 PEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPK  183 (302)
Q Consensus       104 PE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~  183 (302)
                      ||++.   ....+.++|++|+||.+|.+..|..+..........+................+++.++++-|.++|..++.
T Consensus       178 pE~~~---~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~  254 (700)
T KOG2137|consen  178 PEYLL---GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSA  254 (700)
T ss_pred             chhhc---cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcc
Confidence            99996   455678999999999999998544443333333333344444334444455578899999999999999999


Q ss_pred             CCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccc
Q psy3574         184 KRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK  224 (302)
Q Consensus       184 ~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~  224 (302)
                      .||++..++...++.+.+....+.++........++--|++
T Consensus       255 ~rp~~~~l~~~~ff~D~~~~aLrfLD~l~~kdn~qKs~Flk  295 (700)
T KOG2137|consen  255 VRPTLDLLLSIPFFSDPGLKALRFLDDLPQKDNSQKSSFLK  295 (700)
T ss_pred             cCcchhhhhcccccCCchhhhhhhcccccccCcHHHHHHHH
Confidence            99999999998888888888887777666655555555555

>KOG0601|consensus

Probab=99.07  E-value=1.5e-10  Score=105.41  Aligned_cols=183  Identities=20%  Similarity=0.088  Sum_probs=132.3

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHH----HHHHHHhCCCCCCCCcC----CC
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR----ALFLMSKSGFKPPALKD----KD   69 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~----aL~~lH~~~i~Hrdlkp----~~   69 (302)
                      ||.+..|.    .|+-+|+|. .+|. .+.....  .-++...++.++.+...    ||.++|+.+++|-|++|    ..
T Consensus       181 v~~~~~~e~~~~lfiqtE~~~-~sl~-~~~~~~~--~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~  256 (524)
T KOG0601|consen  181 VRDSPAWEGSGILFIQTELCG-ESLQ-SYCHTPC--NFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTT  256 (524)
T ss_pred             cccCcccccCCcceeeecccc-chhH-Hhhhccc--ccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecc
Confidence            44455554    589999996 4777 4444433  25899999999999999    99999999999999999    55


Q ss_pred             CC-CCEEEeccccccccccccccccc-----cccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--
Q psy3574          70 RC-GDVKLADFGVSAQITATINKRKS-----FIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL--  141 (302)
Q Consensus        70 ~~-~~ikL~DFg~a~~~~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--  141 (302)
                      .+ ...+++|||+...+....-....     ..|...|++||..    ..-++...|++++|.++.+..+|..+....  
T Consensus       257 ~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~----~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~  332 (524)
T KOG0601|consen  257 SDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELL----NGLATFASDIFSLGEVILEAILGSHLPSVGKN  332 (524)
T ss_pred             cccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhh----ccccchHhhhcchhhhhHhhHhhcccccCCCC
Confidence            55 78899999999887765322111     2467789999998    444789999999999999998887665433  


Q ss_pred             ChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q psy3574         142 HPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIH  198 (302)
Q Consensus       142 ~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~  198 (302)
                      .....+..    .+  .........+..+...+.+|+..+|..|+++..++++-.++
T Consensus       333 ~~W~~~r~----~~--ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~  383 (524)
T KOG0601|consen  333 SSWSQLRQ----GY--IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIH  383 (524)
T ss_pred             CCcccccc----cc--CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcccccc
Confidence            22222111    11  11112234466677799999999999999999988844333

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.02  E-value=6.4e-10  Score=91.17  Aligned_cols=70  Identities=11%  Similarity=0.054  Sum_probs=58.1

Q ss_pred             chheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccc
Q psy3574           8 FLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSA   83 (302)
Q Consensus         8 ~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~   83 (302)
                      ...|+||||++|++|. .+..         ......++.+++.++.++|..|++||||+|    ++.++.++|+|||.+.
T Consensus       104 ~~~~lv~e~~~g~~L~-~~~~---------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~  173 (198)
T cd05144         104 NRHAVVMEYIDGVELY-RVRV---------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMV  173 (198)
T ss_pred             CCceEEEEEeCCcchh-hccc---------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccc
Confidence            3458999999999987 4322         145567899999999999999999999999    7778999999999986


Q ss_pred             cccc
Q psy3574          84 QITA   87 (302)
Q Consensus        84 ~~~~   87 (302)
                      ....
T Consensus       174 ~~~~  177 (198)
T cd05144         174 STDH  177 (198)
T ss_pred             cCCC
Confidence            5543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.94  E-value=1.7e-09  Score=91.21  Aligned_cols=65  Identities=18%  Similarity=0.107  Sum_probs=53.3

Q ss_pred             eeEEEecCC-cchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574          11 VAAVERKGG-YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus        11 ~iv~E~~~~-g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      ++|||+++| .+|. +++...    .+++.    .+.+|+.+|.+||++||+||||||    ++.++.++|+|||.+..
T Consensus       122 ~lV~e~l~G~~~L~-~~l~~~----~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        122 DILIERIEGARDLV-ALLQEA----PLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             eEEEEecCCCCCHH-HHHhcC----CCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence            599999997 6888 666542    34443    467899999999999999999999    66678999999998754

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.92  E-value=2.2e-09  Score=88.77  Aligned_cols=67  Identities=16%  Similarity=0.125  Sum_probs=57.9

Q ss_pred             hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      ..++||||++|++|. +++....   .    ....++.+++.+|.+||+.|++|+|++|    ++ .+.++|+|||.+..
T Consensus        73 ~~~lv~e~~~G~~L~-~~~~~~~---~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         73 NFIIVMEYIEGEPLK-DLINSNG---M----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             CCEEEEEEeCCcCHH-HHHHhcc---H----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            357999999999999 7776543   2    7889999999999999999999999999    44 78999999998764

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.89  E-value=2.7e-09  Score=87.39  Aligned_cols=64  Identities=19%  Similarity=0.160  Sum_probs=55.0

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .++||||++|++|. .++....   .       .++.+++.+|.+||+.|++|+|++|    ++ ++.++++|||.+...
T Consensus        72 ~~lv~e~~~g~~l~-~~~~~~~---~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724        72 KTIVMEYIEGKPLK-DVIEEGN---D-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             CEEEEEEECCccHH-HHHhhcH---H-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence            48999999999999 6665433   1       7899999999999999999999999    44 889999999987653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1243|consensus

Probab=98.87  E-value=1.4e-08  Score=93.91  Aligned_cols=121  Identities=14%  Similarity=0.124  Sum_probs=88.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHH-hCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS-KSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH-~~~i~Hrdlkp----~~~~   71 (302)
                      |.+|++.+.    .|||+|-+.  .|. .+++.      +....+...+.||+.||.||| +++++|++|.-    ++..
T Consensus        71 Il~yL~t~e~~~~~ylvTErV~--Pl~-~~lk~------l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~  141 (690)
T KOG1243|consen   71 ILSYLDTTEEEGTLYLVTERVR--PLE-TVLKE------LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNES  141 (690)
T ss_pred             hhhhhhhhcccCceEEEeeccc--cHH-HHHHH------hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCC
Confidence            456777665    499999884  455 55664      446788899999999999997 66999999998    9999


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCC
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQ  135 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~  135 (302)
                      |..||++|.++...............--.|..|+.+.   ..  ....|.|-|||++++++.|.
T Consensus       142 GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~---~s--~~s~D~~~Lg~li~el~ng~  200 (690)
T KOG1243|consen  142 GEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEID---PS--EWSIDSWGLGCLIEELFNGS  200 (690)
T ss_pred             CcEEEeeeEEEeccccCCcccccchhhhcccChhhcC---cc--ccchhhhhHHHHHHHHhCcc
Confidence            9999999998765544322122222233466676653   11  14579999999999999993

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.84  E-value=4.5e-09  Score=85.16  Aligned_cols=74  Identities=18%  Similarity=0.117  Sum_probs=57.3

Q ss_pred             chheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh-CCCCCCCCcC----CCCCCCEEEeccccc
Q psy3574           8 FLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK-SGFKPPALKD----KDRCGDVKLADFGVS   82 (302)
Q Consensus         8 ~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~i~Hrdlkp----~~~~~~ikL~DFg~a   82 (302)
                      ...|+||||++|+.+....+....    . ...+..++.+++.++.++|. .||+|||++|    ++ ++.++|+|||.+
T Consensus        88 ~~~~lv~e~~~g~~~~~~~l~~~~----~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a  161 (187)
T cd05119          88 NRHVLVMEFIGGDGIPAPRLKDVR----L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQA  161 (187)
T ss_pred             CCCEEEEEEeCCCCccChhhhhhh----h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEECccc
Confidence            345899999999654322222211    1 16788999999999999999 9999999999    55 899999999998


Q ss_pred             ccccc
Q psy3574          83 AQITA   87 (302)
Q Consensus        83 ~~~~~   87 (302)
                      .....
T Consensus       162 ~~~~~  166 (187)
T cd05119         162 VEIDH  166 (187)
T ss_pred             ccccC
Confidence            65543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.81  E-value=6.7e-09  Score=97.95  Aligned_cols=65  Identities=20%  Similarity=0.218  Sum_probs=55.3

Q ss_pred             hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---CCCCCCEEEecccccccc
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---~~~~~~ikL~DFg~a~~~   85 (302)
                      ..++||||++|++|. +++.           ....++.+++.+|.+||+.|++|||+||   +-.++.++|+|||+++..
T Consensus       410 ~~~lv~E~~~g~~L~-~~l~-----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~~~~~~liDFGla~~~  477 (535)
T PRK09605        410 EKTIVMEYIGGKDLK-DVLE-----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVRDDRLYLIDFGLGKYS  477 (535)
T ss_pred             CCEEEEEecCCCcHH-HHHH-----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEECCcEEEEeCcccccC
Confidence            458999999999999 6554           2356899999999999999999999999   226789999999998653

>KOG0601|consensus

Probab=98.71  E-value=6.4e-09  Score=94.88  Aligned_cols=176  Identities=16%  Similarity=0.101  Sum_probs=124.7

Q ss_pred             Cchhhhcchh----eeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC-C
Q psy3574           1 MSRVFNHFLQ----VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR-C   71 (302)
Q Consensus         1 iv~~~~~~~~----~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~-~   71 (302)
                      +|+++..|+.    ||-.|||+++++. .-.....   .+.+...+.+..|++.++.++|+..++|+|++|    +.. +
T Consensus       328 ~~g~~~~W~~~r~~~ip~e~~~~~s~~-l~~~~~~---~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~  403 (524)
T KOG0601|consen  328 SVGKNSSWSQLRQGYIPLEFCEGGSSS-LRSVTSQ---MLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG  403 (524)
T ss_pred             cCCCCCCccccccccCchhhhcCcchh-hhhHHHH---hcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch
Confidence            3567777774    7999999999988 3333333   689999999999999999999999999999999    222 3


Q ss_pred             CCEEEeccccccccccccccccccccCcccc-hhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWM-APEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~-aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      +..++.|||.+..+...   .....+...++ ..|++.  ....+..++|+++||.-+.+.++|...-......   ..+
T Consensus       404 ~~~~~~~~~~~t~~~~~---~~~~~~~~r~~p~~~~~~--e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~---~~i  475 (524)
T KOG0601|consen  404 FFSKLGDFGCWTRLAFS---SGVFHHIDRLYPIAEILL--EDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS---LTI  475 (524)
T ss_pred             hhhhcccccccccccee---cccccccccccccchhhc--cccccccccccccccccccccccCcccCcccccc---eee
Confidence            78899999998753322   12223444555 356654  4556788999999999999999987543222111   111


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+.  .+.   .......+..+.+.+...++..|+.+.++..
T Consensus       476 ~~~~--~p~---~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~  513 (524)
T KOG0601|consen  476 RSGD--TPN---LPGLKLQLQVLLKVMINPDRKRRPSAVELSL  513 (524)
T ss_pred             eccc--ccC---CCchHHhhhhhhhhhcCCccccchhhhhhcc
Confidence            1111  111   1223478888999999999999999988876

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.68  E-value=2.3e-08  Score=81.11  Aligned_cols=75  Identities=12%  Similarity=0.019  Sum_probs=57.4

Q ss_pred             chheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHH-HhCCCCCCCCcC---CCCCCCEEEecccccc
Q psy3574           8 FLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM-SKSGFKPPALKD---KDRCGDVKLADFGVSA   83 (302)
Q Consensus         8 ~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~l-H~~~i~Hrdlkp---~~~~~~ikL~DFg~a~   83 (302)
                      ...+|||||+.++.+....++..    .+++.++..+..+++.+|..| |+.|++|+|+++   +-.++.+.|+|||.+.
T Consensus        97 ~~~~lvME~Ig~~~~~~~~Lkd~----~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~~~~v~iIDF~qav  172 (197)
T cd05146          97 KKHVLVMSFIGDDQVPAPKLKDA----KLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWHDGKVWFIDVSQSV  172 (197)
T ss_pred             cCCEEEEEEcCCCCccchhhhcc----ccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEECCcEEEEECCCce
Confidence            34589999998765542333322    355566778899999999999 899999999999   4346889999999886


Q ss_pred             ccc
Q psy3574          84 QIT   86 (302)
Q Consensus        84 ~~~   86 (302)
                      ...
T Consensus       173 ~~~  175 (197)
T cd05146         173 EPT  175 (197)
T ss_pred             eCC
Confidence            554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.37  E-value=3.9e-06  Score=74.29  Aligned_cols=159  Identities=15%  Similarity=0.118  Sum_probs=110.3

Q ss_pred             cccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccccccccccccccccCcccchhhccccc
Q psy3574          35 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE  110 (302)
Q Consensus        35 ~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  110 (302)
                      ...++.+....+.|+.+.+-||..|..-+|+.+    +.+.+.+.|+|=..-. +..........+|...|.+||.....
T Consensus       113 ~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq-i~~ng~~~~cpVg~~eftPPElQ~~~  191 (637)
T COG4248         113 HCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ-INANGTLHLCPVGVSEFTPPELQTLP  191 (637)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccccee-eccCCceEecccCccccCCHHHhccc
Confidence            466778888999999999999999999999999    8888999998854322 22333445566899999999987411


Q ss_pred             --ccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCC-------hHH-HHH-------HHHhcC-CCCCCCCCCCCCCHHHH
Q psy3574         111 --RKGGYNQQCDIWAVGITAIELAEL-QPPMFDLH-------PMR-ALF-------LMSKSG-FKPPALKDKDRWSSTFH  171 (302)
Q Consensus       111 --~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~-------~~~-~~~-------~i~~~~-~~~~~~~~~~~~s~~~~  171 (302)
                        .+-+-+...|.|.||+++++++.| ++||.+..       +.+ .+.       .....+ .++|......-+++.++
T Consensus       192 sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vq  271 (637)
T COG4248         192 SFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQ  271 (637)
T ss_pred             cccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHH
Confidence              122345778999999999998886 99996531       222 110       011112 22333333455788999


Q ss_pred             HHHHHhhhc--CCCCCCCHHHHHHH
Q psy3574         172 NFVKIALTK--NPKKRPTADKLLQV  194 (302)
Q Consensus       172 ~li~~~L~~--dp~~R~t~~~ll~~  194 (302)
                      .+..+|+..  ++.-|||++.=+..
T Consensus       272 AlF~qaF~~~~~~~~RP~a~aW~aA  296 (637)
T COG4248         272 ALFQQAFTESGVATPRPTAKAWVAA  296 (637)
T ss_pred             HHHHHHhcccCCCCCCCCHHHHHHH
Confidence            999999954  35689998754443

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.35  E-value=7.8e-07  Score=81.63  Aligned_cols=72  Identities=22%  Similarity=0.277  Sum_probs=55.2

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHH-HHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR-ALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~-aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~   84 (302)
                      .++||||++|++|. ++......  .+   ....++..++. .+..+|..|++|+|++|    +..+|.++|+|||++..
T Consensus       233 ~vLvmE~i~G~~L~-~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~  306 (437)
T TIGR01982       233 RVLTMEWIDGIPLS-DIAALDEA--GL---DRKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGR  306 (437)
T ss_pred             ceEEEEeECCcccc-cHHHHHhc--CC---CHHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeE
Confidence            37999999999998 65543210  12   34456666666 47889999999999999    77889999999999877


Q ss_pred             ccc
Q psy3574          85 ITA   87 (302)
Q Consensus        85 ~~~   87 (302)
                      +..
T Consensus       307 l~~  309 (437)
T TIGR01982       307 LSE  309 (437)
T ss_pred             CCH
Confidence            654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.33  E-value=1.1e-06  Score=69.54  Aligned_cols=68  Identities=18%  Similarity=0.120  Sum_probs=54.2

Q ss_pred             hhcchheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---CCCCCCEEEecccc
Q psy3574           5 FNHFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---KDRCGDVKLADFGV   81 (302)
Q Consensus         5 ~~~~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---~~~~~~ikL~DFg~   81 (302)
                      ++-+...|+|||++|-.|. +.+...          ...+++.+=.-+.-||..||+|+|+.+   +-.++.+.++|||+
T Consensus        69 vD~~~~~I~me~I~G~~lk-d~l~~~----------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~i~~IDfGL  137 (204)
T COG3642          69 VDPDNGLIVMEYIEGELLK-DALEEA----------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGRIYFIDFGL  137 (204)
T ss_pred             EcCCCCEEEEEEeCChhHH-HHHHhc----------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCcEEEEECCc
Confidence            4445557999999997777 666543          245788888889999999999999999   55566699999999


Q ss_pred             cc
Q psy3574          82 SA   83 (302)
Q Consensus        82 a~   83 (302)
                      +.
T Consensus       138 g~  139 (204)
T COG3642         138 GE  139 (204)
T ss_pred             cc
Confidence            75

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.30  E-value=5e-07  Score=69.78  Aligned_cols=64  Identities=11%  Similarity=0.028  Sum_probs=52.8

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC---CCCCCCCcC----CCCCCCEEEeccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS---GFKPPALKD----KDRCGDVKLADFGVS   82 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~i~Hrdlkp----~~~~~~ikL~DFg~a   82 (302)
                      .|++|||++|+.+. .+          +......++.+++.+|++||..   +++|+|++|    ++..+.++++|||.+
T Consensus        68 ~~~v~e~~~g~~~~-~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~  136 (155)
T cd05120          68 SYLLMEWIEGETLD-EV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYA  136 (155)
T ss_pred             cEEEEEecCCeecc-cC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccc
Confidence            68999999998887 32          3345566889999999999985   699999999    566789999999987


Q ss_pred             cc
Q psy3574          83 AQ   84 (302)
Q Consensus        83 ~~   84 (302)
                      ..
T Consensus       137 ~~  138 (155)
T cd05120         137 GY  138 (155)
T ss_pred             cC
Confidence            53

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.21  E-value=3.2e-06  Score=72.28  Aligned_cols=72  Identities=10%  Similarity=-0.107  Sum_probs=57.1

Q ss_pred             heeEEEecCCc-chHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC-------CCCEEEe
Q psy3574          10 QVAAVERKGGY-NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR-------CGDVKLA   77 (302)
Q Consensus        10 ~~iv~E~~~~g-~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~-------~~~ikL~   77 (302)
                      .+||||++++. +|. +++.... ..+.++.....++.++...+.-||..||+|+|+++    ++.       .+.+.|+
T Consensus       110 s~LVte~l~~~~sL~-~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LI  187 (268)
T PRK15123        110 SFIITEDLAPTISLE-DYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVI  187 (268)
T ss_pred             eEEEEeeCCCCccHH-HHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEE
Confidence            57999999986 787 7765321 01455667789999999999999999999999999    332       5789999


Q ss_pred             cccccc
Q psy3574          78 DFGVSA   83 (302)
Q Consensus        78 DFg~a~   83 (302)
                      ||+.+.
T Consensus       188 Dl~r~~  193 (268)
T PRK15123        188 DLHRAQ  193 (268)
T ss_pred             ECCccc
Confidence            999874

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.11  E-value=7.9e-06  Score=67.34  Aligned_cols=71  Identities=15%  Similarity=0.039  Sum_probs=58.8

Q ss_pred             heeEEEecCCc-chHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC---CEEEecccc
Q psy3574          10 QVAAVERKGGY-NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG---DVKLADFGV   81 (302)
Q Consensus        10 ~~iv~E~~~~g-~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~---~ikL~DFg~   81 (302)
                      .++|+|+++|. +|. +++....   .++......++.++...++-||.+||+|+|+++    +...+   .+.|+||+.
T Consensus        92 s~lite~l~~~~~L~-~~~~~~~---~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~  167 (206)
T PF06293_consen   92 SYLITEALPGAQDLR-DLLQQWE---QLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDR  167 (206)
T ss_pred             EEEEEEeCCCcccHH-HHHHhhc---ccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchh
Confidence            47999999984 788 7777644   466778889999999999999999999999999    44444   799999987


Q ss_pred             ccc
Q psy3574          82 SAQ   84 (302)
Q Consensus        82 a~~   84 (302)
                      ++.
T Consensus       168 ~~~  170 (206)
T PF06293_consen  168 MRF  170 (206)
T ss_pred             cee
Confidence            654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.04  E-value=3.3e-06  Score=68.24  Aligned_cols=75  Identities=20%  Similarity=0.256  Sum_probs=50.8

Q ss_pred             hcchheeEEEecC--CcchHHHHHHhccccccccccchhHHHhhHHHHHHH-HHhCCCCCCCCcC---CCCCCCEEEecc
Q psy3574           6 NHFLQVAAVERKG--GYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL-MSKSGFKPPALKD---KDRCGDVKLADF   79 (302)
Q Consensus         6 ~~~~~~iv~E~~~--~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~-lH~~~i~Hrdlkp---~~~~~~ikL~DF   79 (302)
                      +....+|||||++  |..+. .+...     .++......++.+++..+.. +|+.||+|+|+.+   +-..+.+.++||
T Consensus        77 ~~~~~~ivME~I~~~G~~~~-~l~~~-----~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~~~~iIDf  150 (188)
T PF01163_consen   77 DYNRNVIVMEYIGEDGVPLP-RLKDV-----DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDGKVYIIDF  150 (188)
T ss_dssp             EEETTEEEEE--EETTEEGG-CHHHC-----GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETTCEEE--G
T ss_pred             EEeCCEEEEEecCCCccchh-hHHhc-----cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecceEEEEec
Confidence            3344589999999  76665 44433     24467888899999996555 5799999999999   334459999999


Q ss_pred             ccccccc
Q psy3574          80 GVSAQIT   86 (302)
Q Consensus        80 g~a~~~~   86 (302)
                      |.+....
T Consensus       151 ~qav~~~  157 (188)
T PF01163_consen  151 GQAVDSS  157 (188)
T ss_dssp             TTEEETT
T ss_pred             CcceecC
Confidence            9886544

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.04  E-value=7.9e-06  Score=64.86  Aligned_cols=61  Identities=18%  Similarity=0.065  Sum_probs=49.0

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCC-----CCCCCcC----CCCCCCEEEeccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF-----KPPALKD----KDRCGDVKLADFG   80 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i-----~Hrdlkp----~~~~~~ikL~DFg   80 (302)
                      .++||||++|.++. ..           ......++.+++.+|+.||..++     +|+|++|    ++ ++.++++|||
T Consensus        66 ~~lv~e~i~G~~l~-~~-----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~  132 (170)
T cd05151          66 GVLITEFIEGSELL-TE-----------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWE  132 (170)
T ss_pred             CeEEEEecCCCccc-cc-----------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecc
Confidence            57999999998886 22           11224567899999999999985     9999999    44 6789999999


Q ss_pred             ccc
Q psy3574          81 VSA   83 (302)
Q Consensus        81 ~a~   83 (302)
                      .+.
T Consensus       133 ~a~  135 (170)
T cd05151         133 YAG  135 (170)
T ss_pred             ccc
Confidence            874

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.97  E-value=6.7e-06  Score=76.81  Aligned_cols=69  Identities=20%  Similarity=0.189  Sum_probs=51.1

Q ss_pred             eeEEEecCCcchHHHHH--Hhcc-ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC----CEEEecc
Q psy3574          11 VAAVERKGGYNQQCDIW--AVGI-TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG----DVKLADF   79 (302)
Q Consensus        11 ~iv~E~~~~g~L~~~~~--~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~----~ikL~DF   79 (302)
                      +|||||+.|+.+. ++-  ...+ ....+.+..+..++.|++       ..|++|+|++|    ++.+|    +++++||
T Consensus       237 VLvmE~i~G~~l~-d~~~l~~~g~d~~~la~~~v~~~~~Qif-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDF  308 (537)
T PRK04750        237 VMVMERMYGIPVS-DVAALRAAGTDMKLLAERGVEVFFTQVF-------RDGFFHADMHPGNIFVSYDPPENPRYIALDF  308 (537)
T ss_pred             eEEEeeecCccHH-hHHHHHhcCCCHHHHHHHHHHHHHHHHH-------hCCeeeCCCChHHeEEecCCCCCCeEEEEec
Confidence            6999999999997 542  2222 112466666667777765       48999999999    66666    9999999


Q ss_pred             cccccccc
Q psy3574          80 GVSAQITA   87 (302)
Q Consensus        80 g~a~~~~~   87 (302)
                      |.+..+..
T Consensus       309 Givg~l~~  316 (537)
T PRK04750        309 GIVGSLNK  316 (537)
T ss_pred             ceEEECCH
Confidence            99987754

>KOG3741|consensus

Probab=97.91  E-value=0.00021  Score=65.15  Aligned_cols=154  Identities=16%  Similarity=0.090  Sum_probs=104.8

Q ss_pred             heeEEEecCC-cchHHHHHHhcc-----------ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574          10 QVAAVERKGG-YNQQCDIWAVGI-----------TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus        10 ~~iv~E~~~~-g~L~~~~~~~~~-----------~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      +++|++|+++ ++|.+.++....           ++..++|..+|.++.||..||.++|+.|+.-+-+.+    +....+
T Consensus       352 lvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~R  431 (655)
T KOG3741|consen  352 LVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMR  431 (655)
T ss_pred             EEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcce
Confidence            5899999985 578844443211           123578899999999999999999999999888888    444447


Q ss_pred             EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCC-CCCCChHHH-HHHHH
Q psy3574          74 VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPP-MFDLHPMRA-LFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p-f~~~~~~~~-~~~i~  151 (302)
                      |+|...|....+..+.       +       +.+.      --.+-|.=.||.++..|.||..- +..+..... ...|.
T Consensus       432 IriS~C~i~Dvl~~d~-------~-------~~le------~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~  491 (655)
T KOG3741|consen  432 IRISGCGIMDVLQEDP-------T-------EPLE------SQQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRIT  491 (655)
T ss_pred             EEEecccceeeecCCC-------C-------cchh------HHhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhh
Confidence            8887776654433321       0       1111      11456888999999999999542 222222222 21221


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                                  ..++.+++++|.-+...++.+ -++.+++.+..
T Consensus       492 ------------~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~~  523 (655)
T KOG3741|consen  492 ------------TTYSTDLRNVVEYLESLNFRE-KSIQDLLPMIG  523 (655)
T ss_pred             ------------hhhhHHHHHHHHHHHhcCccc-ccHHHHHHHHH
Confidence                        446889999999999888876 68888887543

>KOG3087|consensus

Probab=97.90  E-value=3.8e-05  Score=60.90  Aligned_cols=72  Identities=14%  Similarity=0.085  Sum_probs=52.4

Q ss_pred             heeEEEecCC-cchHHHHHHhccccccccccch-hHHHhhHHHHHHHHHhCCCCCCCCcC-----CCCCCC--EEEeccc
Q psy3574          10 QVAAVERKGG-YNQQCDIWAVGITAIELAELQP-PMFDLHPMRALFLMSKSGFKPPALKD-----KDRCGD--VKLADFG   80 (302)
Q Consensus        10 ~~iv~E~~~~-g~L~~~~~~~~~~~~~l~~~~~-~~i~~qi~~aL~~lH~~~i~Hrdlkp-----~~~~~~--ikL~DFg   80 (302)
                      -+|+|||++| .++. +++.....  .-.++.. ..+++.|=..+.-||.++|+|+||..     .+.+++  +.++|||
T Consensus        85 ~~i~ME~~~g~~~vk-~~i~~~~~--~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfg  161 (229)
T KOG3087|consen   85 GQIYMEFIDGASTVK-DFILSTME--DESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFG  161 (229)
T ss_pred             CeEEEEeccchhHHH-HHHHHHcc--CcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeec
Confidence            4699999988 4666 44444321  2333333 78999999999999999999999998     233334  4899999


Q ss_pred             cccc
Q psy3574          81 VSAQ   84 (302)
Q Consensus        81 ~a~~   84 (302)
                      ++..
T Consensus       162 ls~~  165 (229)
T KOG3087|consen  162 LSSV  165 (229)
T ss_pred             chhc
Confidence            9754

>KOG1035|consensus

Probab=97.87  E-value=2.7e-05  Score=76.90  Aligned_cols=169  Identities=14%  Similarity=0.100  Sum_probs=117.6

Q ss_pred             chheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-------CCCCCCEEEe--c
Q psy3574           8 FLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-------KDRCGDVKLA--D   78 (302)
Q Consensus         8 ~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-------~~~~~~ikL~--D   78 (302)
                      +...+..|+|..-++. ..+..-+   .++..+++.+..+++.||.|+|+....|.-+..       .+..+.+...  |
T Consensus       259 ~~~~v~~~~~s~~~~~-~~~q~v~---~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~  334 (1351)
T KOG1035|consen  259 IVLDVLQEICSKVELR-SLLQSVG---SIPLETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSD  334 (1351)
T ss_pred             HHHHHHHhhcCccchH-HHHhhcc---ccCHHHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCccceeecchhh
Confidence            3445777888888888 7777766   789999999999999999999999776665544       5566677776  8


Q ss_pred             cccccccccccccccccccCcccchhhcccccccCCC--CchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC
Q psy3574          79 FGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGY--NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFK  156 (302)
Q Consensus        79 Fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~--~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~  156 (302)
                      |+..+.+.+.. .......+..+.++|...   ...+  ....|+|.+|.....+..|..+-....   ......     
T Consensus       335 ~~ss~~l~d~~-~~~~~~~~~~~~~~e~~~---~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~---~~~~~l-----  402 (1351)
T KOG1035|consen  335 FDSSKPLPDNE-KSFSDLLAEIRNADEDLK---ENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSA---VPVSLL-----  402 (1351)
T ss_pred             hcccccCCCcc-cchhhcCccccccccccc---cccchhhhhhHHHHHHHHHhhhhhcCccccccc---chhhhh-----
Confidence            88887766542 222334456677777764   2223  334699999999999988765421110   000000     


Q ss_pred             CCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q psy3574         157 PPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIH  198 (302)
Q Consensus       157 ~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~  198 (302)
                            .........+++.+|+.-++++|+++.+++.+.+..
T Consensus       403 ------~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~  438 (1351)
T KOG1035|consen  403 ------DVLSTSELLDALPKCLDEDSEERLSALELLTHPFLR  438 (1351)
T ss_pred             ------ccccchhhhhhhhhhcchhhhhccchhhhhhchhcc
Confidence                  011112678899999999999999999999944433

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.53  E-value=0.00013  Score=59.88  Aligned_cols=61  Identities=18%  Similarity=0.134  Sum_probs=46.8

Q ss_pred             eeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---CCCCCCEEEecccccc
Q psy3574          11 VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---KDRCGDVKLADFGVSA   83 (302)
Q Consensus        11 ~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---~~~~~~ikL~DFg~a~   83 (302)
                      ++||||++|..|. ++..       +++    .+...+..++.-||+.|++|+|..|   +-.++.++++||+..+
T Consensus       119 ~ll~EYIeG~~l~-d~~~-------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~i~iID~~~k~  182 (229)
T PF06176_consen  119 VLLMEYIEGVELN-DIED-------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNGIRIIDTQGKR  182 (229)
T ss_pred             EEEEEEecCeecc-cchh-------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCcEEEEECcccc
Confidence            5899999998876 4332       222    2456677889999999999999999   4445669999998654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG0576|consensus

Probab=97.35  E-value=2e-05  Score=73.25  Aligned_cols=173  Identities=25%  Similarity=0.244  Sum_probs=113.8

Q ss_pred             heeEEEecCCc-chHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcCCCCCCCEEEeccccccccccc
Q psy3574          10 QVAAVERKGGY-NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITAT   88 (302)
Q Consensus        10 ~~iv~E~~~~g-~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp~~~~~~ikL~DFg~a~~~~~~   88 (302)
                      .+++++++.+| +.....-....   .+.+-+...+.+.-+++++++|+..-+||| ..+..++..|+.+|+....+...
T Consensus       309 ~~i~~~i~s~~rs~~~~~~~se~---~~~~~~~~~~~r~et~~l~~l~~~~~~~~d-~~l~s~~~~~~~~~~v~~~L~~~  384 (829)
T KOG0576|consen  309 LWIPMRICSTGRSSALEMTVSEI---ALEQYQFAYPLRKETRPLAELHSSYKVHRD-NILGSEEEVKLLDFAVPPQLTRT  384 (829)
T ss_pred             cchhhhhhcCCccccccCChhhH---hhhhhhhhhhhhhhcccccccccccccCcc-cccccccccccccccCCcccCcc
Confidence            47899999887 22201111111   455666777888889999999999888998 33556688899999998777654


Q ss_pred             cccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCH
Q psy3574          89 INKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSS  168 (302)
Q Consensus        89 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~  168 (302)
                      . ..++..+++.++|||+..   ...+....|+|++|+-..+|.-|.+|-...  ......+-. +...+.+.....+++
T Consensus       385 ~-~~~t~~~~~~~~~pev~~---~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P--~~~~~~~g~-~p~s~~L~~~~aw~~  457 (829)
T KOG0576|consen  385 M-KPRTAIGTPEPLAPEVIQ---ENTIDGCPDSGSLAVSAIQMAPGLPPRSSP--PAVLPMIGN-GPNSPMLTDKSAWSP  457 (829)
T ss_pred             c-ccccCCCCCCCCCchhhc---ccccccCCCccCCCcchhhcCCCCCCCCCC--ccccCCCCC-CCCccccchhhhcCc
Confidence            3 455678999999999986   556788899999998888888887774331  111100000 001111111111222


Q ss_pred             HHH-HHHHHhhhcCCCCCCCHHHHHH
Q psy3574         169 TFH-NFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       169 ~~~-~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ... ++...|+...|..|+....++.
T Consensus       458 ~~~~~~~~~~~~g~P~~pkv~mgacf  483 (829)
T KOG0576|consen  458 VFHRDFPAPCLNGLPPTPKVHMGACF  483 (829)
T ss_pred             ccccCCcccccCCCCCCCcchhhHHH
Confidence            222 4778889989998988887777

>PRK09902 hypothetical protein; Provisional

Probab=97.25  E-value=0.00087  Score=54.90  Aligned_cols=75  Identities=12%  Similarity=0.012  Sum_probs=57.5

Q ss_pred             chheeEEEecCC-cchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC--EEEeccc
Q psy3574           8 FLQVAAVERKGG-YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD--VKLADFG   80 (302)
Q Consensus         8 ~~~~iv~E~~~~-g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~--ikL~DFg   80 (302)
                      .+.+||+|-+.| -+|. +++..... .+.++.....++.++..+++-||..|+.|+|+.+    ++..|.  ++++||.
T Consensus        98 ~rA~LVTe~L~g~~~L~-~~l~~~~~-~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlE  175 (216)
T PRK09902         98 WRALLVTEDMAGFISIA-DWYAQHAV-SPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLE  175 (216)
T ss_pred             eEEEEEEEeCCCCccHH-HHHhcCCc-CCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhh
Confidence            345899998864 3777 77655431 1346667789999999999999999999999999    454556  9999998


Q ss_pred             cccc
Q psy3574          81 VSAQ   84 (302)
Q Consensus        81 ~a~~   84 (302)
                      -++.
T Consensus       176 k~r~  179 (216)
T PRK09902        176 KSRR  179 (216)
T ss_pred             ccch
Confidence            6643

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.17  E-value=0.00081  Score=56.78  Aligned_cols=70  Identities=13%  Similarity=0.107  Sum_probs=55.6

Q ss_pred             hcchheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccc
Q psy3574           6 NHFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGV   81 (302)
Q Consensus         6 ~~~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~   81 (302)
                      ++....+||||++|-.|. .+        ++..+.+..++..|+.-+.-+-..||+|+|+.+    ++.+|.+.++||-.
T Consensus       178 ~~nRHaVvMe~ieG~eL~-~~--------r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~vIDwPQ  248 (304)
T COG0478         178 AWNRHAVVMEYIEGVELY-RL--------RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIVVIDWPQ  248 (304)
T ss_pred             ccccceeeeehcccceee-cc--------cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEEEEeCcc
Confidence            344458999999997776 11        234667777888888888888889999999999    88899999999976


Q ss_pred             ccc
Q psy3574          82 SAQ   84 (302)
Q Consensus        82 a~~   84 (302)
                      +..
T Consensus       249 ~v~  251 (304)
T COG0478         249 AVP  251 (304)
T ss_pred             ccc
Confidence            644

>KOG1826|consensus

Probab=97.12  E-value=6.9e-05  Score=76.08  Aligned_cols=176  Identities=10%  Similarity=-0.075  Sum_probs=113.6

Q ss_pred             heeEEEecCCcchHHHHHHhcccc-ccccccchhHHHhhHHHHHHHHHhC-C----CCCCCCcC----CCCCCCEEEecc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITA-IELAELQPPMFDLHPMRALFLMSKS-G----FKPPALKD----KDRCGDVKLADF   79 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~lH~~-~----i~Hrdlkp----~~~~~~ikL~DF   79 (302)
                      .|++++|+.+|.++ .++-.+... .++.+.-+.-...+.+.+..-+|+. +    .+|+++++    +..+..+|+.++
T Consensus      1306 e~~r~~~~~~g~~f-~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~ 1384 (2724)
T KOG1826|consen 1306 EYIRSLYVEFGKLF-SIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKG 1384 (2724)
T ss_pred             HHHHHHHHHHhHHH-HHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCccccccc
Confidence            57899999999999 555544322 2344444444444447888888875 2    67889988    667778999999


Q ss_pred             ccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC
Q psy3574          80 GVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPA  159 (302)
Q Consensus        80 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~  159 (302)
                      |+.+.............+++.|+.+++..   ...++.++|+|..|+-+|....|..+|..-... ....+...+...  
T Consensus      1385 gLdKIknp~~sf~Gl~l~sp~~v~qli~N---~ik~t~rsdilr~s~~ly~rs~~n~~fi~flq~-~Lkgiidn~tf~-- 1458 (2724)
T KOG1826|consen 1385 GLDKIKNPVLSFFGLELCSPIYVLQLIKN---EIKFTKRSDILRRSLSLYLRSDGNAYFIFFLQP-ALKGIIDNHTFF-- 1458 (2724)
T ss_pred             ccccccCchHhhhhhhhCCHHHHHHHHHH---HHhhhhHHHHHHHHHHHHHHhcccHHHHHHHHH-HHcCcccccccc--
Confidence            99985555444555667889999999985   666788899999999999998887776321111 111122211111  


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         160 LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       160 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                       ..+...+.++-.....+|.+.-..||.-...+.
T Consensus      1459 -sIe~l~pgdaNve~~~~Ll~K~~~rp~q~isls 1491 (2724)
T KOG1826|consen 1459 -SIEKLKPGDANVEALHRLLWKYMERPGQYISLS 1491 (2724)
T ss_pred             -cccccCCCcccHHHHHHHHHHhhhcchhhhhcc
Confidence             111112333444444555555667888776666

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=96.45  E-value=0.0019  Score=53.37  Aligned_cols=44  Identities=16%  Similarity=0.057  Sum_probs=31.7

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS   58 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~   58 (302)
                      .|+||||++|+++. ..+.. .   .+++.....++.+++.+|..||+.
T Consensus        75 ~~~v~e~i~G~~l~-~~~~~-~---~~~~~~~~~i~~~i~~~l~~lH~~  118 (223)
T cd05154          75 PFYVMERVDGRVLR-DRLLR-P---ELSPEERRALARALADTLAALHSV  118 (223)
T ss_pred             ceEEEEEeCCEecC-CCCCC-C---CCCHHHHHHHHHHHHHHHHHHhCC
Confidence            47999999999887 43321 2   466666777788888888888754

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=96.29  E-value=0.0051  Score=51.42  Aligned_cols=74  Identities=14%  Similarity=0.026  Sum_probs=54.2

Q ss_pred             hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh-CCCCCCCCcC---CCCCCCEEEeccccccc
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK-SGFKPPALKD---KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~i~Hrdlkp---~~~~~~ikL~DFg~a~~   84 (302)
                      ...+||||+....+-.-.++.-    ++...++..+..+++..+.-|-. .++||+||+.   +-.++.+.++|+|.|..
T Consensus       140 ~nVLvMEfIg~~g~pAP~LkDv----~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~~~~p~iID~~QaV~  215 (268)
T COG1718         140 NNVLVMEFIGDDGLPAPRLKDV----PLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVHDGEPYIIDVSQAVT  215 (268)
T ss_pred             CCeEEEEeccCCCCCCCCcccC----CcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEECCeEEEEECccccc
Confidence            3479999997642221122211    34444788899999999999888 8999999999   44589999999998865


Q ss_pred             cc
Q psy3574          85 IT   86 (302)
Q Consensus        85 ~~   86 (302)
                      ..
T Consensus       216 ~~  217 (268)
T COG1718         216 ID  217 (268)
T ss_pred             cC
Confidence            54

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=95.79  E-value=0.007  Score=49.01  Aligned_cols=83  Identities=14%  Similarity=0.041  Sum_probs=61.1

Q ss_pred             chhhhcchheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC---CCCCCCCcC----CCCCCCE
Q psy3574           2 SRVFNHFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS---GFKPPALKD----KDRCGDV   74 (302)
Q Consensus         2 v~~~~~~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~i~Hrdlkp----~~~~~~i   74 (302)
                      .|++|.-=.++|.||...+++. .+...-.....-++.....|+.+++..+.+|+..   .+.-.|+++    ++++|++
T Consensus        23 pk~lG~CG~~~v~E~~~~~~~~-~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~l  101 (188)
T PF12260_consen   23 PKLLGSCGRFYVVEYVGAGSLY-GIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRL  101 (188)
T ss_pred             CCeeeECCCEEEEEeecCcccc-ccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcE
Confidence            5677776667999999977664 2211000111467888999999999999999983   456689999    7888999


Q ss_pred             EEecccccccc
Q psy3574          75 KLADFGVSAQI   85 (302)
Q Consensus        75 kL~DFg~a~~~   85 (302)
                      |++|...+...
T Consensus       102 k~iDld~v~~~  112 (188)
T PF12260_consen  102 KLIDLDDVFVE  112 (188)
T ss_pred             EEEechhcchh
Confidence            99999876544

Proteins in this uncharacterised family are described as transmembrane proteins.

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=95.63  E-value=0.014  Score=54.62  Aligned_cols=70  Identities=21%  Similarity=0.270  Sum_probs=48.3

Q ss_pred             heeEEEecCCcchHHHH--HHhccccccccccchhHHHhhHHHH-HHHHHhCCCCCCCCcC----CCCCCCEEEeccccc
Q psy3574          10 QVAAVERKGGYNQQCDI--WAVGITAIELAELQPPMFDLHPMRA-LFLMSKSGFKPPALKD----KDRCGDVKLADFGVS   82 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~--~~~~~~~~~l~~~~~~~i~~qi~~a-L~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a   82 (302)
                      -+++|||++|-.+. ++  ++..+    ++   .+.++..++.+ +..+-..|++|.|..|    +..+|++.+.|||..
T Consensus       241 ~VLtmE~i~Gi~i~-d~~~l~~~g----~d---~k~ia~~~~~~f~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~  312 (517)
T COG0661         241 RVLTMEWIDGIKIS-DIAALKSAG----ID---RKELAELLVRAFLRQLLRDGFFHADPHPGNILVRSDGRIVLLDFGIV  312 (517)
T ss_pred             cEEEEEeeCCEecc-cHHHHHhcC----CC---HHHHHHHHHHHHHHHHHhcCccccCCCccceEEecCCcEEEEcCcce
Confidence            37999999998888 55  33333    33   22333333332 2233348999999999    888899999999998


Q ss_pred             ccccc
Q psy3574          83 AQITA   87 (302)
Q Consensus        83 ~~~~~   87 (302)
                      ..+..
T Consensus       313 g~l~~  317 (517)
T COG0661         313 GRLDP  317 (517)
T ss_pred             ecCCH
Confidence            77654

>KOG2268|consensus

Probab=94.93  E-value=0.025  Score=49.37  Aligned_cols=71  Identities=14%  Similarity=0.218  Sum_probs=54.2

Q ss_pred             hhhcchheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecc
Q psy3574           4 VFNHFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADF   79 (302)
Q Consensus         4 ~~~~~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DF   79 (302)
                      -+++...|+|||++.|..|. .+.+         ...+..+...++.-+--|-.+|+||+|..-    +.+++.++++||
T Consensus       177 piD~~RH~Vvmelv~g~Pl~-~v~~---------v~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i~vIDF  246 (465)
T KOG2268|consen  177 PIDHNRHCVVMELVDGYPLR-QVRH---------VEDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKIVVIDF  246 (465)
T ss_pred             cccccceeeHHHhhccccee-eeee---------cCChHHHHHHHHHHHHHHHHcCceecccchheeEEecCCCEEEeec
Confidence            45566679999999998887 3332         234556677777778888999999999988    777899999999


Q ss_pred             ccccc
Q psy3574          80 GVSAQ   84 (302)
Q Consensus        80 g~a~~   84 (302)
                      -....
T Consensus       247 PQmvS  251 (465)
T KOG2268|consen  247 PQMVS  251 (465)
T ss_pred             hHhhc
Confidence            76543

>KOG1235|consensus

Probab=94.24  E-value=0.088  Score=49.36  Aligned_cols=70  Identities=19%  Similarity=0.132  Sum_probs=45.5

Q ss_pred             heeEEEecCCcchHHHH--HHhccccccccccchhHHHhhHHHHH-HHHHhCCCCCCCCcC----CC----CCCCEEEec
Q psy3574          10 QVAAVERKGGYNQQCDI--WAVGITAIELAELQPPMFDLHPMRAL-FLMSKSGFKPPALKD----KD----RCGDVKLAD   78 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~--~~~~~~~~~l~~~~~~~i~~qi~~aL-~~lH~~~i~Hrdlkp----~~----~~~~ikL~D   78 (302)
                      -+++||||+|..+. ++  +...+    ++..   .++..+.++. .-|=..|++|.|-.|    +.    .++.+.+.|
T Consensus       277 RVLtME~~~G~~i~-Dl~~i~~~g----i~~~---~i~~~l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllD  348 (538)
T KOG1235|consen  277 RVLTMEYVDGIKIN-DLDAIDKRG----ISPH---DILNKLVEAYLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLD  348 (538)
T ss_pred             eEEEEEecCCccCC-CHHHHHHcC----CCHH---HHHHHHHHHHHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEc
Confidence            47999999998555 33  23333    4444   3334444332 223346899999999    22    478899999


Q ss_pred             ccccccccc
Q psy3574          79 FGVSAQITA   87 (302)
Q Consensus        79 Fg~a~~~~~   87 (302)
                      ||+...+..
T Consensus       349 hGl~~~is~  357 (538)
T KOG1235|consen  349 HGLYAVISH  357 (538)
T ss_pred             ccccccccH
Confidence            999876654

>KOG1093|consensus

Probab=92.49  E-value=0.065  Score=49.63  Aligned_cols=77  Identities=19%  Similarity=0.140  Sum_probs=54.3

Q ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCC-------CCCCCCHHHHHHHHHhhhcCCCCCCCHH
Q psy3574         117 QQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK-------DKDRWSSTFHNFVKIALTKNPKKRPTAD  189 (302)
Q Consensus       117 ~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-------~~~~~s~~~~~li~~~L~~dp~~R~t~~  189 (302)
                      +++|||++|.++.++.-|...+......+....+......+....       ....++..+.++..+|+-..|..||...
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~  189 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPM  189 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchh
Confidence            589999999999999988777766666655555554332222110       0122466788899999999999999877


Q ss_pred             HHHH
Q psy3574         190 KLLQ  193 (302)
Q Consensus       190 ~ll~  193 (302)
                      ++.+
T Consensus       190 ~~~k  193 (725)
T KOG1093|consen  190 ELSK  193 (725)
T ss_pred             HHhc
Confidence            7666

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=90.35  E-value=0.38  Score=38.43  Aligned_cols=70  Identities=16%  Similarity=0.107  Sum_probs=48.4

Q ss_pred             hhhcchheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-----CCCCCCEEEec
Q psy3574           4 VFNHFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-----KDRCGDVKLAD   78 (302)
Q Consensus         4 ~~~~~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-----~~~~~~ikL~D   78 (302)
                      +|.....++.|||+.|-.|. .+....          -+.-+..++.+-.-|-..||-|..+.-     +-.++.+.|+|
T Consensus        81 vy~yg~~~i~me~i~G~~L~-~~~~~~----------~rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iID  149 (201)
T COG2112          81 VYFYGEDFIRMEYIDGRPLG-KLEIGG----------DRKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIID  149 (201)
T ss_pred             EEEechhhhhhhhhcCcchh-hhhhcc----------cHHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEE
Confidence            34444456789999998887 433311          133445566666667778999999987     55566899999


Q ss_pred             cccccc
Q psy3574          79 FGVSAQ   84 (302)
Q Consensus        79 Fg~a~~   84 (302)
                      |..|..
T Consensus       150 Fd~At~  155 (201)
T COG2112         150 FDSATF  155 (201)
T ss_pred             ccchhh
Confidence            998863

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=88.20  E-value=0.48  Score=42.31  Aligned_cols=66  Identities=20%  Similarity=0.118  Sum_probs=49.4

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC-CCCCCCCcC---CCCCCCEEEeccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS-GFKPPALKD---KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp---~~~~~~ikL~DFg~a~~   84 (302)
                      .|++|++. |++|.  +++.      -..+++..|+++.+..++-+..+ ..-|||+..   +-+.|+|.|+||-+++.
T Consensus       301 ~yl~~kdh-gt~is--~ik~------~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId~GnvtLIDfklsRl  370 (488)
T COG5072         301 LYLHFKDH-GTPIS--IIKA------DRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILIDEGNVTLIDFKLSRL  370 (488)
T ss_pred             EEEEEecC-Cceee--eeec------ccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeeecCceEEEEeeeeec
Confidence            47888865 44665  3332      33567788888888888877776 788999998   33499999999999874

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=87.23  E-value=0.78  Score=37.52  Aligned_cols=38  Identities=34%  Similarity=0.399  Sum_probs=30.3

Q ss_pred             HHHhhHHHHHHHHHhCCCCCCCCcC-CCCCCCEEEeccccc
Q psy3574          43 MFDLHPMRALFLMSKSGFKPPALKD-KDRCGDVKLADFGVS   82 (302)
Q Consensus        43 ~i~~qi~~aL~~lH~~~i~Hrdlkp-~~~~~~ikL~DFg~a   82 (302)
                      .-+.+|++-|..+|..||+-+|+++ .-.+|  ||+|||.+
T Consensus       168 ~~~~~~~~dl~~~~k~gI~~~Dv~~~ny~~G--~lvDfs~~  206 (207)
T PF13095_consen  168 RDIPQMLRDLKILHKLGIVPRDVKPRNYRGG--KLVDFSSS  206 (207)
T ss_pred             hHHHHHHHHHHHHHHCCeeeccCccccccCC--EEEecccC
Confidence            3467888889999999999999998 22233  89999864

>KOG2270|consensus

Probab=84.91  E-value=1.1  Score=40.10  Aligned_cols=71  Identities=13%  Similarity=0.051  Sum_probs=53.7

Q ss_pred             eeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh-CCCCCCCCcC---CCCCCCEEEecccccccc
Q psy3574          11 VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK-SGFKPPALKD---KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        11 ~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~i~Hrdlkp---~~~~~~ikL~DFg~a~~~   85 (302)
                      +|||+|+.+..-..-.++.    ..++...+..+-.+++.-+.-|.. +++||.||.-   +-.+|.+.++|-+.+...
T Consensus       240 VLVM~FlGrdgw~aPkLKd----~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~LyhdG~lyiIDVSQSVE~  314 (520)
T KOG2270|consen  240 VLVMEFLGRDGWAAPKLKD----ASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYHDGKLYIIDVSQSVEH  314 (520)
T ss_pred             eEeeeeccCCCCcCccccc----ccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEECCEEEEEEccccccC
Confidence            7999999753333122322    258888899998999888888754 5999999988   778899999998876543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	302
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		3e-32
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		3e-32
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-31
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		6e-31
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		2e-30
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		2e-30
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		4e-30
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		6e-30
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		1e-29
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		1e-28
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		5e-28
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		7e-28
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-27
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-27
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		7e-25
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		7e-25
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-24
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		2e-24
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-24
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		2e-24
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		4e-24
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		2e-22
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		7e-22
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		5e-21
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		5e-21
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		3e-20
4fie_A	423	Full-Length Human Pak4 Length = 423		3e-20
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		3e-20
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		3e-20
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		3e-20
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		4e-20
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		4e-14
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		3e-13
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		2e-11
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		3e-11
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		6e-11
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		1e-10
3kk9_A	282	Camkii Substrate Complex B Length = 282		1e-10
3kk8_A	284	Camkii Substrate Complex A Length = 284		1e-10
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		2e-10
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		2e-10
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		2e-10
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		4e-10
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		5e-10
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		5e-10
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		6e-10
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		7e-10
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		7e-10
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		1e-09
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		2e-09
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		2e-09
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		2e-09
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		2e-09
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		3e-09
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		4e-09
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		7e-09
3soa_A	444	Full-Length Human Camkii Length = 444		7e-09
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		8e-09
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		8e-09
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		8e-09
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		9e-09
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		1e-08
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		1e-08
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		1e-08
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		1e-08
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		2e-08
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		2e-08
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		2e-08
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		3e-08
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		3e-08
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		3e-08
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-08
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		5e-08
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-08
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-08
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		6e-08
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		6e-08
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		6e-08
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-08
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		6e-08
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		7e-08
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		7e-08
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		8e-08
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-07
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-07
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-07
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		2e-07
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		2e-07
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		3e-07
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		3e-07
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		3e-07
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-07
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-07
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		3e-07
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		3e-07
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		4e-07
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		5e-07
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		5e-07
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		7e-07
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		7e-07
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		7e-07
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		8e-07
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		8e-07
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		8e-07
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		8e-07
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		8e-07
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		8e-07
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		8e-07
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		9e-07
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		9e-07
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		1e-06
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		1e-06
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		1e-06
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		1e-06
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		1e-06
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		2e-06
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		2e-06
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-06
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-06
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		2e-06
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		2e-06
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		2e-06
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		2e-06
4ae9_A	343	Structure And Function Of The Human Sperm-specific		2e-06
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		2e-06
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		2e-06
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		2e-06
4h58_A	275	Braf In Complex With Compound 3 Length = 275		2e-06
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		2e-06
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		2e-06
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		2e-06
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-06
4ae6_A	343	Structure And Function Of The Human Sperm-specific		2e-06
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		2e-06
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-06
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		2e-06
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		2e-06
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-06
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		2e-06
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		2e-06
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		2e-06
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		2e-06
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-06
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		2e-06
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		2e-06
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		2e-06
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		2e-06
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		2e-06
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		2e-06
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		2e-06
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		2e-06
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-06
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		2e-06
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		2e-06
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		2e-06
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		2e-06
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		2e-06
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		2e-06
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		2e-06
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		2e-06
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		2e-06
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-06
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		3e-06
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		3e-06
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		3e-06
3g51_A	325	Structural Diversity Of The Active Conformation Of		3e-06
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-06
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-06
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		3e-06
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		3e-06
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		4e-06
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		4e-06
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		4e-06
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		4e-06
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		4e-06
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		4e-06
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		4e-06
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		4e-06
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		4e-06
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		4e-06
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		4e-06
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		4e-06
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		5e-06
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		5e-06
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		5e-06
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		5e-06
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		5e-06
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		5e-06
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		5e-06
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		5e-06
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		5e-06
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		5e-06
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		6e-06
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		6e-06
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		7e-06
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		8e-06
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		8e-06
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		9e-06
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		9e-06
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		9e-06
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		9e-06
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		9e-06
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		9e-06
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		1e-05
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		1e-05
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		1e-05
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		1e-05
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		1e-05
2oza_A	356	Structure Of P38alpha Complex Length = 356		1e-05
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		1e-05
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-05
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		1e-05
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		1e-05
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		1e-05
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		1e-05
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		1e-05
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		1e-05
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		1e-05
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		1e-05
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-05
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		1e-05
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		1e-05
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		2e-05
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		2e-05
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		2e-05
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-05
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		2e-05
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		2e-05
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-05
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		2e-05
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		3e-05
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		3e-05
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		3e-05
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-05
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		3e-05
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-05
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		3e-05
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		3e-05
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		3e-05
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		3e-05
2wtk_B	373	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		4e-05
3gni_B	389	Structure Of Strad And Mo25 Length = 389		4e-05
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		4e-05
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		5e-05
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		5e-05
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		5e-05
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		5e-05
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		5e-05
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		6e-05
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		6e-05
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		7e-05
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		8e-05
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		8e-05
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		9e-05
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		9e-05
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		9e-05
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-04
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		1e-04
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-04
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-04
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		1e-04
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		1e-04
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		1e-04
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		1e-04
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		1e-04
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		2e-04
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		2e-04
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		2e-04
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		2e-04
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		2e-04
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		2e-04
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		2e-04
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		2e-04
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		2e-04
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		2e-04
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		2e-04
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		2e-04
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		3e-04
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		3e-04
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		3e-04
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		3e-04
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		3e-04
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		3e-04
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		3e-04
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		3e-04
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		3e-04
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		3e-04
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		3e-04
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		4e-04
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		4e-04
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		4e-04
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		6e-04
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		6e-04
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		6e-04
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		6e-04
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		6e-04
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		6e-04
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		6e-04
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		7e-04
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		7e-04
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		7e-04
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		7e-04
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		7e-04
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		7e-04
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		7e-04
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		7e-04
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		7e-04
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		8e-04
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		8e-04
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		8e-04
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		9e-04
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		9e-04
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		9e-04

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score =  135 bits (340), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/124 (52%), Positives = 89/124 (71%), Gaps = 4/124 (3%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAI 129
           GD++LADFGVSA+   T+ KR SFIGTPYWMAPEV   E  +   Y+ + DIW++GIT I
Sbjct: 154 GDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLI 213
Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           E+A+++PP  +L+PMR L  ++KS   PP L    +WS  F +F+KIAL KNP+ RP+A 
Sbjct: 214 EMAQIEPPHHELNPMRVLLKIAKS--DPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAA 271
Query: 190 KLLQ 193
           +LL+
Sbjct: 272 QLLE 275

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score =  135 bits (340), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/124 (52%), Positives = 89/124 (71%), Gaps = 4/124 (3%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAI 129
           GD++LADFGVSA+   T+ KR SFIGTPYWMAPEV   E  +   Y+ + DIW++GIT I
Sbjct: 146 GDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLI 205
Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           E+A+++PP  +L+PMR L  ++KS   PP L    +WS  F +F+KIAL KNP+ RP+A 
Sbjct: 206 EMAQIEPPHHELNPMRVLLKIAKS--DPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAA 263
Query: 190 KLLQ 193
           +LL+
Sbjct: 264 QLLE 267

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score =  133 bits (334), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/124 (53%), Positives = 85/124 (68%), Gaps = 4/124 (3%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG--YNQQCDIWAVGITAI 129
           GD+KLADFGVSA+ T TI +R SFIGTPYWMAPEV   E      Y+ + D+W++GIT I
Sbjct: 172 GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           E+AE++PP  +L+PMR L  ++KS  +PP L    RWSS F +F+K  L KN   R T  
Sbjct: 232 EMAEIEPPHHELNPMRVLLKIAKS--EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTS 289
Query: 190 KLLQ 193
           +LLQ
Sbjct: 290 QLLQ 293

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score =  131 bits (329), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 65/124 (52%), Positives = 84/124 (67%), Gaps = 4/124 (3%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG--YNQQCDIWAVGITAI 129
           GD+KLADFGVSA+ T  I +R SFIGTPYWMAPEV   E      Y+ + D+W++GIT I
Sbjct: 172 GDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           E+AE++PP  +L+PMR L  ++KS  +PP L    RWSS F +F+K  L KN   R T  
Sbjct: 232 EMAEIEPPHHELNPMRVLLKIAKS--EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTS 289
Query: 190 KLLQ 193
           +LLQ
Sbjct: 290 QLLQ 293

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score =  129 bits (324), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/124 (51%), Positives = 83/124 (66%), Gaps = 4/124 (3%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG--YNQQCDIWAVGITAI 129
           GD+KLADFGVSA+ T  I +R  FIGTPYWMAPEV   E      Y+ + D+W++GIT I
Sbjct: 172 GDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           E+AE++PP  +L+PMR L  ++KS  +PP L    RWSS F +F+K  L KN   R T  
Sbjct: 232 EMAEIEPPHHELNPMRVLLKIAKS--EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTS 289
Query: 190 KLLQ 193
           +LLQ
Sbjct: 290 QLLQ 293

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score =  129 bits (324), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/136 (47%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G  KLADFGV+ Q+T  + KR   IGTP+WMAPEV    ++ GYN   DIW++GITAIE+
Sbjct: 162 GHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVI---QEIGYNCVADIWSLGITAIEM 218
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AE +PP  D+HPMRA+F++  +   PP  +  + WS  F +FVK  L K+P++R TA +L
Sbjct: 219 AEGKPPYADIHPMRAIFMIPTN--PPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQL 276
Query: 192 LQVILIHRARVAAVER 207
           LQ   +  A+  ++ R
Sbjct: 277 LQHPFVRSAKGVSILR 292

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score =  127 bits (320), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 61/123 (49%), Positives = 87/123 (70%), Gaps = 5/123 (4%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERK--GGYNQQCDIWAVGITAIE 130
           +VKL DFGVSAQ+  T+ +R +FIGTPYWMAPEV A +      Y+ + D+W++GITAIE
Sbjct: 167 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE 226
Query: 131 LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           +AE  PP+ D+HPMRALFL+ ++    P LK K +WS  F +F++  L KN  +RP  ++
Sbjct: 227 MAEGAPPLCDMHPMRALFLIPRN--PAPRLKSK-KWSKKFQSFIESCLVKNHSQRPATEQ 283
Query: 191 LLQ 193
           L++
Sbjct: 284 LMK 286

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score =  126 bits (317), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/128 (52%), Positives = 88/128 (68%), Gaps = 7/128 (5%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGV+ Q+T T  KR  F+GTP+WMAPEV    ++  Y+ + DIW++GITAIEL
Sbjct: 153 GDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI---KQSAYDFKADIWSLGITAIEL 209
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           A+ +PP  DLHPMR LFL+ K+   PP L+ +   S  F  FV+  L K+P+ RPTA +L
Sbjct: 210 AKGEPPNSDLHPMRVLFLIPKNS--PPTLEGQH--SKPFKEFVEACLNKDPRFRPTAKEL 265
Query: 192 LQVILIHR 199
           L+   I R
Sbjct: 266 LKHKFITR 273

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/122 (50%), Positives = 85/122 (69%), Gaps = 7/122 (5%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GDVKLADFGV+ Q+T T  KR +F+GTP+WMAPEV    ++  Y+ + DIW++GITAIEL
Sbjct: 157 GDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI---QQSAYDSKADIWSLGITAIEL 213
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           A+ +PP  D+HPMR LFL+ K+   PP L     ++ +F  F+   L K+P  RPTA +L
Sbjct: 214 AKGEPPNSDMHPMRVLFLIPKN--NPPTLVGD--FTKSFKEFIDACLNKDPSFRPTAKEL 269
Query: 192 LQ 193
           L+
Sbjct: 270 LK 271

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 63/128 (49%), Positives = 85/128 (66%), Gaps = 7/128 (5%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G+VKLADFGV+ Q+T T  KR +F+GTP+WMAPEV    ++  Y+ + DIW++GITAIEL
Sbjct: 161 GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI---KQSAYDSKADIWSLGITAIEL 217
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           A  +PP  +LHPM+ LFL+ K+   PP L  +  +S     FV+  L K P  RPTA +L
Sbjct: 218 ARGEPPHSELHPMKVLFLIPKN--NPPTL--EGNYSKPLKEFVEACLNKEPSFRPTAKEL 273
Query: 192 LQVILIHR 199
           L+   I R
Sbjct: 274 LKHKFILR 281

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score =  120 bits (302), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 63/128 (49%), Positives = 85/128 (66%), Gaps = 7/128 (5%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G+VKLADFGV+ Q+T T  KR +F+GTP+WMAPEV    ++  Y+ + DIW++GITAIEL
Sbjct: 141 GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI---KQSAYDSKADIWSLGITAIEL 197
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           A  +PP  +LHPM+ LFL+ K+   PP L  +  +S     FV+  L K P  RPTA +L
Sbjct: 198 ARGEPPHSELHPMKVLFLIPKNN--PPTL--EGNYSKPLKEFVEACLNKEPSFRPTAKEL 253
Query: 192 LQVILIHR 199
           L+   I R
Sbjct: 254 LKHKFILR 261

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 7/128 (5%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G+VKLADFGV+ Q+T T  KR  F+GTP+WMAPEV    ++  Y+ + DIW++GITAIEL
Sbjct: 156 GEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI---KQSAYDSKADIWSLGITAIEL 212
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           A  +PP  +LHPM+ LFL+ K+   PP L  +  +S     FV+  L K P  RPTA +L
Sbjct: 213 ARGEPPHSELHPMKVLFLIPKNN--PPTL--EGNYSKPLKEFVEACLNKEPSFRPTAKEL 268
Query: 192 LQVILIHR 199
           L+   I R
Sbjct: 269 LKHKFILR 276

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 7/128 (5%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G+VKLADFGV+ Q+T T  KR  F+GTP+WMAPEV    ++  Y+ + DIW++GITAIEL
Sbjct: 141 GEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI---KQSAYDSKADIWSLGITAIEL 197
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           A  +PP  +LHPM+ LFL+ K+   PP L  +  +S     FV+  L K P  RPTA +L
Sbjct: 198 ARGEPPHSELHPMKVLFLIPKNN--PPTL--EGNYSKPLKEFVEACLNKEPSFRPTAKEL 253
Query: 192 LQVILIHR 199
           L+   I R
Sbjct: 254 LKHKFILR 261

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score =  110 bits (276), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 7/130 (5%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG SA I A  N    F+GTPYWMAPEV     +G Y+ + D+W++GIT IEL
Sbjct: 152 GLVKLGDFG-SASIMAPAN---XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AE +PP+F+++ M AL+ ++++  + PAL+    WS  F NFV   L K P+ RPT++ L
Sbjct: 208 AERKPPLFNMNAMSALYHIAQN--ESPALQ-SGHWSEYFRNFVDSCLQKIPQDRPTSEVL 264
Query: 192 LQVILIHRAR 201
           L+   + R R
Sbjct: 265 LKHRFVLRER 274

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score =  110 bits (276), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 7/130 (5%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG SA I A  N    F+GTPYWMAPEV     +G Y+ + D+W++GIT IEL
Sbjct: 191 GLVKLGDFG-SASIMAPAN---XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AE +PP+F+++ M AL+ ++++  + PAL+    WS  F NFV   L K P+ RPT++ L
Sbjct: 247 AERKPPLFNMNAMSALYHIAQN--ESPALQ-SGHWSEYFRNFVDSCLQKIPQDRPTSEVL 303
Query: 192 LQVILIHRAR 201
           L+   + R R
Sbjct: 304 LKHRFVLRER 313

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 82/122 (67%), Gaps = 5/122 (4%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG  AQIT   +KR + +GTPYWMAPEV  V RK  Y  + DIW++GI AIE+
Sbjct: 153 GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV--VTRK-AYGPKVDIWSLGIMAIEM 209
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            E +PP  + +P+RAL+L++ +G   P L++ ++ S+ F +F+   L  + +KR +A +L
Sbjct: 210 IEGEPPYLNENPLRALYLIATNG--TPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267
Query: 192 LQ 193
           LQ
Sbjct: 268 LQ 269

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 81/122 (66%), Gaps = 5/122 (4%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG  AQIT   +KR   +GTPYWMAPEV  V RK  Y  + DIW++GI AIE+
Sbjct: 153 GSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEV--VTRK-AYGPKVDIWSLGIMAIEM 209
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            E +PP  + +P+RAL+L++ +G   P L++ ++ S+ F +F+   L  + +KR +A +L
Sbjct: 210 IEGEPPYLNENPLRALYLIATNG--TPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267
Query: 192 LQ 193
           LQ
Sbjct: 268 LQ 269

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 81/122 (66%), Gaps = 5/122 (4%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG  AQIT   +KR   +GTPYWMAPEV  V RK  Y  + DIW++GI AIE+
Sbjct: 153 GSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEV--VTRK-AYGPKVDIWSLGIMAIEM 209
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            E +PP  + +P+RAL+L++ +G   P L++ ++ S+ F +F+   L  + +KR +A +L
Sbjct: 210 IEGEPPYLNENPLRALYLIATNG--TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKEL 267
Query: 192 LQ 193
           LQ
Sbjct: 268 LQ 269

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/122 (45%), Positives = 82/122 (67%), Gaps = 5/122 (4%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG  AQIT   +KR + +GTPYWMAPEV  V RK  Y  + DIW++GI AIE+
Sbjct: 154 GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV--VTRK-AYGPKVDIWSLGIMAIEM 210
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            E +PP  + +P+RAL+L++ +G   P L++ ++ S+ F +F+   L  + +KR +A +L
Sbjct: 211 IEGEPPYLNENPLRALYLIATNG--TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKEL 268
Query: 192 LQ 193
           +Q
Sbjct: 269 IQ 270

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 55/122 (45%), Positives = 81/122 (66%), Gaps = 5/122 (4%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG  AQIT   +KR   +GTPYWMAPEV  V RK  Y  + DIW++GI AIE+
Sbjct: 154 GSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEV--VTRK-AYGPKVDIWSLGIMAIEM 210
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            E +PP  + +P+RAL+L++ +G   P L++ ++ S+ F +F+   L  + +KR +A +L
Sbjct: 211 IEGEPPYLNENPLRALYLIATNG--TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKEL 268
Query: 192 LQ 193
           +Q
Sbjct: 269 IQ 270

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 31  ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRC----GDVKLADFGVSAQIT 86
           +T   + E Q     L  +RAL  +   G     +K         G +KL+DFG  AQ++
Sbjct: 133 VTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVS 192
Query: 87  ATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRA 146
             + KRK  +GTPYWMAPEV +   +  Y  + DIW++GI  IE+ + +PP F+  P++A
Sbjct: 193 KEVPKRKXLVGTPYWMAPEVIS---RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA 249
Query: 147 LFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLL 192
           +  +  S   PP +KD  + SS    F+ + L + P +R TA +LL
Sbjct: 250 MRRIRDS--LPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELL 293

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score =  100 bits (250), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 76/121 (62%), Gaps = 5/121 (4%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL+DFG  AQI+  + KRK  +GTPYWMAPEV +   +  Y  + DIW++GI  IE+
Sbjct: 178 GRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVIS---RSLYATEVDIWSLGIMVIEM 234
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            + +PP F   P++A+  +  S   PP LK+  + S    +F++  L ++P++R TA +L
Sbjct: 235 VDGEPPYFSDSPVQAMKRLRDS--PPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQEL 292
Query: 192 L 192
           L
Sbjct: 293 L 293

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/142 (42%), Positives = 87/142 (61%), Gaps = 16/142 (11%)
Query: 72  GDVKLADFGVSAQITA----TINK-RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           G V++ADFGVSA +      T NK RK+F+GTP WMAPEV  +E+  GY+ + DIW+ GI
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV--MEQVRGYDFKADIWSFGI 215
Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL----KDKD---RWSSTFHNFVKIALT 179
           TAIELA    P     PM+ L L  ++   PP+L    +DK+   ++  +F   + + L 
Sbjct: 216 TAIELATGAAPYHKYPPMKVLMLTLQN--DPPSLETGVQDKEMLKKYGKSFRKMISLCLQ 273
Query: 180 KNPKKRPTADKLLQVILIHRAR 201
           K+P+KRPTA +LL+     +A+
Sbjct: 274 KDPEKRPTAAELLRHKFFQKAK 295

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/142 (42%), Positives = 87/142 (61%), Gaps = 16/142 (11%)
Query: 72  GDVKLADFGVSAQITA----TINK-RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           G V++ADFGVSA +      T NK RK+F+GTP WMAPEV  +E+  GY+ + DIW+ GI
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV--MEQVRGYDFKADIWSFGI 210
Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL----KDKD---RWSSTFHNFVKIALT 179
           TAIELA    P     PM+ L L  ++   PP+L    +DK+   ++  +F   + + L 
Sbjct: 211 TAIELATGAAPYHKYPPMKVLMLTLQN--DPPSLETGVQDKEMLKKYGKSFRKMISLCLQ 268
Query: 180 KNPKKRPTADKLLQVILIHRAR 201
           K+P+KRPTA +LL+     +A+
Sbjct: 269 KDPEKRPTAAELLRHKFFQKAK 290

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL+DFG  AQ++  + +RK  +GTPYWMAPE+ +   +  Y  + DIW++GI  IE+
Sbjct: 207 GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLGIMVIEM 263
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            + +PP F+  P++A+ ++  +   PP LK+  + S +   F+   L ++P +R TA +L
Sbjct: 264 VDGEPPYFNEPPLKAMKMIRDN--LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAEL 321
Query: 192 LQ 193
           L+
Sbjct: 322 LK 323

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL+DFG  AQ++  + +RK  +GTPYWMAPE+ +   +  Y  + DIW++GI  IE+
Sbjct: 284 GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLGIMVIEM 340
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            + +PP F+  P++A+ ++  +   PP LK+  + S +   F+   L ++P +R TA +L
Sbjct: 341 VDGEPPYFNEPPLKAMKMIRDN--LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAEL 398
Query: 192 LQ 193
           L+
Sbjct: 399 LK 400

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL+DFG  AQ++  + +RK  +GTPYWMAPE+ +   +  Y  + DIW++GI  IE+
Sbjct: 162 GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLGIMVIEM 218
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            + +PP F+  P++A+ ++  +   PP LK+  + S +   F+   L ++P +R TA +L
Sbjct: 219 VDGEPPYFNEPPLKAMKMIRDN--LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAEL 276
Query: 192 LQ 193
           L+
Sbjct: 277 LK 278

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL+DFG  AQ++  + +RK  +GTPYWMAPE+ +   +  Y  + DIW++GI  IE+
Sbjct: 164 GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLGIMVIEM 220
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            + +PP F+  P++A+ ++  +   PP LK+  + S +   F+   L ++P +R TA +L
Sbjct: 221 VDGEPPYFNEPPLKAMKMIRDN--LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAEL 278
Query: 192 LQ 193
           L+
Sbjct: 279 LK 280

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL+DFG  AQ++  + +RK  +GTPYWMAPE+ +   +  Y  + DIW++GI  IE+
Sbjct: 153 GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLGIMVIEM 209
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            + +PP F+  P++A+ ++  +   PP LK+  + S +   F+   L ++P +R TA +L
Sbjct: 210 VDGEPPYFNEPPLKAMKMIRDN--LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAEL 267
Query: 192 LQ 193
           L+
Sbjct: 268 LK 269

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL+DFG  AQ++  + +RK  +GTPYWMAPE+ +   +  Y  + DIW++GI  IE+
Sbjct: 157 GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLGIMVIEM 213
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            + +PP F+  P++A+ ++  +   PP LK+  + S +   F+   L ++P +R TA +L
Sbjct: 214 VDGEPPYFNEPPLKAMKMIRDN--LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAEL 271
Query: 192 LQ 193
           L+
Sbjct: 272 LK 273

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPE-VAAVERKGGYNQQCDIWAVGIT 127
           DR G++KL DFG+S Q+  +I K +     PY MAPE +     + GY+ + D+W++GIT
Sbjct: 160 DRSGNIKLCDFGISGQLVDSIAKTRDAGCRPY-MAPERIDPSASRQGYDVRSDVWSLGIT 218
Query: 128 AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD--RWSSTFHNFVKIALTKNPKKR 185
             ELA  + P    + +         G  PP L + +   +S +F NFV + LTK+  KR
Sbjct: 219 LYELATGRFPYPKWNSVFDQLTQVVKG-DPPQLSNSEEREFSPSFINFVNLCLTKDESKR 277
Query: 186 PTADKLLQ--VILIHRARVAAV 205
           P   +LL+   IL++  R   V
Sbjct: 278 PKYKELLKHPFILMYEERAVEV 299

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G V+L DFG++  + +T+   ++ IGTPY+++PE+   E K  YN + DIWA+G    EL
Sbjct: 162 GTVQLGDFGIARVLNSTVELARACIGTPYYLSPEIC--ENK-PYNNKSDIWALGCVLYEL 218
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
             L+   F+   M+ L L   SG  PP       +S    + V     +NP+ RP+ + +
Sbjct: 219 CTLKHA-FEAGSMKNLVLKIISGSFPPV---SLHYSYDLRSLVSQLFKRNPRDRPSVNSI 274
Query: 192 LQ 193
           L+
Sbjct: 275 LE 276

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 10/141 (7%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG--YNQQCDIWAVGITAI 129
           G++KL DFGVS Q+  ++    SF+GT  +M+PE     R  G  Y+ Q DIW++G++ +
Sbjct: 161 GEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPE-----RLQGTHYSVQSDIWSMGLSLV 213
Query: 130 ELAELQPPMFDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
           E+A  + P+       A+F L+     +PP       +S  F +FV   L KNP +R   
Sbjct: 214 EMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADL 273
Query: 189 DKLLQVILIHRARVAAVERKG 209
            +L+    I R+    V+  G
Sbjct: 274 KQLMVHAFIKRSDAEEVDFAG 294

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 22/157 (14%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG--YNQQCDIWAVGITAI 129
           G++KL DFGVS Q+  ++    SF+GT  +M+PE     R  G  Y+ Q DIW++G++ +
Sbjct: 142 GEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPE-----RLQGTHYSVQSDIWSMGLSLV 194
Query: 130 ELAELQPPM------FDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNP 182
           E+A  + P+       D  P  A+F L+     +PP       +S  F +FV   L KNP
Sbjct: 195 EMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNP 254
Query: 183 KKRPTADKLLQVILIHRARVAAVERKG------GYNQ 213
            +R    +L+    I R+    V+  G      G NQ
Sbjct: 255 AERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLNQ 291

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL D G+    ++      S +GTPY+M+PE      + GYN + DIW++G    E+
Sbjct: 173 GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI---HENGYNFKSDIWSLGCLLYEM 229
Query: 132 AELQPPMF-DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           A LQ P + D   + +L    +    PP     D +S      V + +  +P+KRP    
Sbjct: 230 AALQSPFYGDKMNLYSLCKKIEQCDYPPL--PSDHYSEELRQLVNMCINPDPEKRPDVTY 287
Query: 191 LLQV 194
           +  V
Sbjct: 288 VYDV 291

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAA--VERKGGYNQQCDIWAVGI 126
           D  G +KL DFG+S ++     K +S  G   +MAPE        K  Y+ + D+W++GI
Sbjct: 159 DERGQIKLCDFGISGRLVDDKAKDRS-AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGI 217
Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
           + +ELA  Q P  +      + L      +PP L     +S  F +FVK  LTK+ +KRP
Sbjct: 218 SLVELATGQFPYKNCKTDFEV-LTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRP 276
Query: 187 TADKLLQVILIHRARVAAVE 206
             +KLL+   I R     V+
Sbjct: 277 KYNKLLEHSFIKRYETLEVD 296

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  K +   VKLADFG++ ++  +      F GTP +++PEV    +K  Y++  DIWA 
Sbjct: 137 LASKAKGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPEVL---KKDPYSKPVDIWAC 192
Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G+    L    PP +D    R L+   K+G       + D  +    + +   LT NPKK
Sbjct: 193 GVILYILLVGYPPFWDEDQHR-LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK 251
Query: 185 RPTADKLLQV-ILIHRARVA-AVERK 208
           R TAD+ L+V  + +R RVA A+ R+
Sbjct: 252 RITADQALKVPWICNRERVASAIHRQ 277

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  K +   VKLADFG++ ++  +      F GTP +++PEV    +K  Y++  DIWA 
Sbjct: 138 LASKAKGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPEVL---KKDPYSKPVDIWAC 193
Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G+    L    PP +D    R L+   K+G       + D  +    + +   LT NPKK
Sbjct: 194 GVILYILLVGYPPFWDEDQHR-LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK 252
Query: 185 RPTADKLLQV-ILIHRARVA-AVERK 208
           R TAD+ L+V  + +R RVA A+ R+
Sbjct: 253 RITADQALKVPWICNRERVASAIHRQ 278

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  K +   VKLADFG++ ++  +      F GTP +++PEV    +K  Y++  DIWA 
Sbjct: 161 LASKAKGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPEVL---KKDPYSKPVDIWAC 216
Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G+    L    PP +D    R L+   K+G       + D  +    + +   LT NPKK
Sbjct: 217 GVILYILLVGYPPFWDEDQHR-LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK 275
Query: 185 RPTADKLLQV-ILIHRARVA-AVERK 208
           R TAD+ L+V  + +R RVA A+ R+
Sbjct: 276 RITADQALKVPWICNRERVASAIHRQ 301

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE-RKGGYNQQCDIWAVGITAIE 130
           G VK+ DFG+S  +  ++ K       PY MAPE    E  + GY+ + DIW++GIT IE
Sbjct: 191 GQVKMCDFGISGYLVDSVAKTIDAGCKPY-MAPERINPELNQKGYSVKSDIWSLGITMIE 249
Query: 131 LAELQPPMFDL--HPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
           LA L+ P +D    P + L  + +   +P      D++S+ F +F    L KN K+RPT 
Sbjct: 250 LAILRFP-YDSWGTPFQQLKQVVE---EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTY 305
Query: 189 DKLLQ 193
            +L+Q
Sbjct: 306 PELMQ 310

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG--YNQQCDIWAVGITAI 129
           G++KL DFGVS Q+   +     F+GT  +M+PE     R  G  Y+ Q DIW++G++ +
Sbjct: 145 GEIKLCDFGVSGQLIDEMANE--FVGTRSYMSPE-----RLQGTHYSVQSDIWSMGLSLV 197
Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           E+A  + P     PM    L+     +PP       +S  F +FV   L KNP +R    
Sbjct: 198 EMAVGRYPR---PPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLK 254
Query: 190 KLLQVILIHRARVAAVERKG 209
           +L+    I R+    V+  G
Sbjct: 255 QLMVHAFIKRSDAEEVDFAG 274

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE-RKGGYNQQCDIWAVGITAIE 130
           G VK+ DFG+S  +   + K       PY MAPE    E  + GY+ + DIW++GIT IE
Sbjct: 147 GQVKMCDFGISGYLVDDVAKDIDAGCKPY-MAPERINPELNQKGYSVKSDIWSLGITMIE 205
Query: 131 LAELQPPMFDL--HPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
           LA L+ P +D    P + L  + +   +P      D++S+ F +F    L KN K+RPT 
Sbjct: 206 LAILRFP-YDSWGTPFQQLKQVVE---EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTY 261
Query: 189 DKLLQ 193
            +L+Q
Sbjct: 262 PELMQ 266

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKG--GYNQQCDIWAVGITAI 129
           G +K++DFG S ++       ++F GT  +MAPE+     KG  GY +  DIW++G T I
Sbjct: 160 GVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEII---DKGPRGYGKAADIWSLGCTII 216
Query: 130 ELAELQPPMFDL-HPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
           E+A  +PP ++L  P  A+F +      P      +  S+    F+      +P KR  A
Sbjct: 217 EMATGKPPFYELGEPQAAMFKVGMFKVHPEI---PESMSAEAKAFILKCFEPDPDKRACA 273
Query: 189 DKLL 192
           + LL
Sbjct: 274 NDLL 277

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKG--GYNQQCDIWAVGITAI 129
           G +K++DFG S ++       ++F GT  +MAPE+     KG  GY +  DIW++G T I
Sbjct: 146 GVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEII---DKGPRGYGKAADIWSLGCTII 202
Query: 130 ELAELQPPMFDL-HPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
           E+A  +PP ++L  P  A+F +      P      +  S+    F+      +P KR  A
Sbjct: 203 EMATGKPPFYELGEPQAAMFKVGMFKVHPEI---PESMSAEAKAFILKCFEPDPDKRACA 259
Query: 189 DKLL 192
           + LL
Sbjct: 260 NDLL 263

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  K +   VKLADFG++ ++  +      F GTP +++PEV    +K  Y++  DIWA 
Sbjct: 138 LASKAKGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPEVL---KKDPYSKPVDIWAC 193
Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G+    L    PP +D    R L+   K+G       + D  +    + +   LT NPKK
Sbjct: 194 GVILYILLVGYPPFWDEDQHR-LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK 252
Query: 185 RPTADKLLQV 194
           R TAD+ L+V
Sbjct: 253 RITADQALKV 262

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 60  FKPPALKDKDRC--GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQ 117
            KP  L    +C    VKLADFG++ ++         F GTP +++PEV    RK  Y +
Sbjct: 156 LKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVL---RKDPYGK 212
Query: 118 QCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIA 177
             DIWA G+    L    PP +D      L+   K+G       + D  +    N +   
Sbjct: 213 PVDIWACGVILYILLVGYPPFWD-EDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQM 271
Query: 178 LTKNPKKRPTADKLLQ 193
           LT NP KR TAD+ L+
Sbjct: 272 LTINPAKRITADQALK 287

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+   VK+ DFG+S    +T    KS  GTP WMAPEV    R    N++ D+++ G+  
Sbjct: 173 DKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVL---RDEPSNEKSDVYSFGVIL 229
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            ELA LQ P  +L+P +   +++  GFK   L+     +      ++   T  P KRP+ 
Sbjct: 230 WELATLQQPWGNLNPAQ---VVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSF 286
Query: 189 DKLLQVI 195
             ++ ++
Sbjct: 287 ATIMDLL 293

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           +VKL DFG++  +    +  K+F+GTPY+M+PE      +  YN++ DIW++G    EL 
Sbjct: 154 NVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM---NRMSYNEKSDIWSLGCLLYELC 210
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLL 192
            L PP            + +  F+        R+S   +  +   L      RP+ +++L
Sbjct: 211 ALMPPFTAFSQKELAGKIREGKFRRIPY----RYSDELNEIITRMLNLKDYHRPSVEEIL 266
Query: 193 QVILI 197
           +  LI
Sbjct: 267 ENPLI 271

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           +VKL DFG++  +    +  K+F+GTPY+M+PE      +  YN++ DIW++G    EL 
Sbjct: 154 NVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM---NRMSYNEKSDIWSLGCLLYELC 210
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLL 192
            L PP            + +  F+        R+S   +  +   L      RP+ +++L
Sbjct: 211 ALMPPFTAFSQKELAGKIREGKFRRIPY----RYSDELNEIITRMLNLKDYHRPSVEEIL 266
Query: 193 QVILI 197
           +  LI
Sbjct: 267 ENPLI 271

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L+ K R   +K+ DFG+SA       K K  +GT Y++APEV     +  Y+++CD+W+ 
Sbjct: 154 LESKSRDALIKIVDFGLSAHFEVG-GKMKERLGTAYYIAPEVL----RKKYDEKCDVWSC 208
Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKS--GFKPPALKDKDRWSSTFHNFVKIALTKNP 182
           G+    L    PP         L  + K    F PP   D  + S      VK+ LT  P
Sbjct: 209 GVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPP---DWTQVSDEAKQLVKLMLTYEP 265
Query: 183 KKRPTADKLL 192
            KR +A++ L
Sbjct: 266 SKRISAEEAL 275

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L+ K R   +K+ DFG+SA       K K  +GT Y++APEV     +  Y+++CD+W+ 
Sbjct: 137 LESKSRDALIKIVDFGLSAHFEVG-GKMKERLGTAYYIAPEVL----RKKYDEKCDVWSC 191
Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKS--GFKPPALKDKDRWSSTFHNFVKIALTKNP 182
           G+    L    PP         L  + K    F PP   D  + S      VK+ LT  P
Sbjct: 192 GVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPP---DWTQVSDEAKQLVKLMLTYEP 248
Query: 183 KKRPTADKLL 192
            KR +A++ L
Sbjct: 249 SKRISAEEAL 258

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 62/136 (45%), Gaps = 6/136 (4%)
Query: 60  FKPPALKDKDRC--GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQ 117
            KP  L    +C    VKLADFG++ ++         F GTP +++PEV    RK  Y +
Sbjct: 129 LKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL---RKEAYGK 185
Query: 118 QCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIA 177
             DIWA G+    L    PP +D      L+   K+G       + D  +    N +   
Sbjct: 186 PVDIWACGVILYILLVGYPPFWD-EDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQM 244
Query: 178 LTKNPKKRPTADKLLQ 193
           LT NP KR TA + L+
Sbjct: 245 LTINPAKRITAHEALK 260

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           +VKL DFG++  +    +  K F+GTPY+M+PE      +  YN++ DIW++G    EL 
Sbjct: 154 NVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM---NRMSYNEKSDIWSLGCLLYELC 210
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLL 192
            L PP            + +  F+        R+S   +  +   L      RP+ +++L
Sbjct: 211 ALMPPFTAFSQKELAGKIREGKFRRIPY----RYSDELNEIITRMLNLKDYHRPSVEEIL 266
Query: 193 QVILI 197
           +  LI
Sbjct: 267 ENPLI 271

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAV---ERKGGYNQQCDIWAVGITAI 129
           ++KL DFG S Q+     K +S  GTP ++APE+      +   GY ++ D+W+ G+   
Sbjct: 162 NIKLTDFGFSCQLDPG-EKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220
Query: 130 ELAELQPPMFDLHPMRALFL-MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            L    PP +  H  + L L M  SG       + D +S T  + V   L   P+KR TA
Sbjct: 221 TLLAGSPPFW--HRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTA 278
Query: 189 DKLL 192
           ++ L
Sbjct: 279 EEAL 282

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L+ K++  D+K+ DFG+S        K K  IGT Y++APEV     +G Y+++CD+W+ 
Sbjct: 154 LESKEKDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVL----RGTYDEKCDVWSA 208
Query: 125 GITAIELAELQPPMFDLHPMRAL--FLMSKSGFKPPALKDKDRW---SSTFHNFVKIALT 179
           G+    L    PP +  +    L      K  F  P      +W   S    + ++  LT
Sbjct: 209 GVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP------QWRTISDDAKDLIRKMLT 262
Query: 180 KNPKKRPTADKLLQ 193
            +P  R TA + L+
Sbjct: 263 FHPSLRITATQCLE 276

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  K +   VKLADFG++ ++         F GTP +++PEV    RK  Y +  D+WA 
Sbjct: 143 LASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL---RKDPYGKPVDLWAC 199
Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G+    L    PP +D    R L+   K+G       + D  +    + +   LT NP K
Sbjct: 200 GVILYILLVGYPPFWDEDQHR-LYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSK 258
Query: 185 RPTADKLLQVILI-HRARVAAV 205
           R TA + L+   I HR+ VA+ 
Sbjct: 259 RITAAEALKHPWISHRSTVASC 280

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L+ K++  D+K+ DFG+S        K K  IGT Y++APEV     +G Y+++CD+W+ 
Sbjct: 154 LESKEKDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVL----RGTYDEKCDVWSA 208
Query: 125 GITAIELAELQPPMFDLHPMRAL--FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNP 182
           G+    L    PP +  +    L      K  F  P  +     S    + ++  LT +P
Sbjct: 209 GVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR---TISDDAKDLIRKMLTFHP 265
Query: 183 KKRPTADKLLQ 193
             R TA + L+
Sbjct: 266 SLRITATQCLE 276

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  K +   VKLADFG++ ++         F GTP +++PEV    RK  Y +  D+WA 
Sbjct: 154 LASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL---RKDPYGKPVDLWAC 210
Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G+    L    PP +D    R L+   K+G       + D  +    + +   LT NP K
Sbjct: 211 GVILYILLVGYPPFWDEDQHR-LYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSK 269
Query: 185 RPTADKLLQVILI-HRARVAAV 205
           R TA + L+   I HR+ VA+ 
Sbjct: 270 RITAAEALKHPWISHRSTVASC 291

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L+ K++  D+K+ DFG+S        K K  IGT Y++APEV     +G Y+++CD+W+ 
Sbjct: 154 LESKEKDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVL----RGTYDEKCDVWSA 208
Query: 125 GITAIELAELQPPMFDLHPMRAL--FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNP 182
           G+    L    PP +  +    L      K  F  P  +     S    + ++  LT +P
Sbjct: 209 GVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR---TISDDAKDLIRKMLTFHP 265
Query: 183 KKRPTADKLLQ 193
             R TA + L+
Sbjct: 266 SLRITATQCLE 276

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VK  DFG+S  +   + K       PY     +     + GY+ + DIW++GIT IEL
Sbjct: 174 GQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
Query: 132 AELQPPMFDL--HPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           A L+ P +D    P + L  + +   +P      D++S+ F +F    L KN K+RPT  
Sbjct: 234 AILRFP-YDSWGTPFQQLKQVVE---EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYP 289
Query: 190 KLLQ 193
           +L Q
Sbjct: 290 ELXQ 293

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAV---ERKGGYNQQCDIWAVGITAIE 130
           ++L+DFG S  +     K +   GTP ++APE+      E   GY ++ D+WA G+    
Sbjct: 239 IRLSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFT 297
Query: 131 LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           L    PP +    +  L ++ +  ++  + +  DR SST  + +   L  +P+ R TA++
Sbjct: 298 LLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDR-SSTVKDLISRLLQVDPEARLTAEQ 356
Query: 191 LLQ 193
            LQ
Sbjct: 357 ALQ 359

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+   VK+ DFG+S    +     K   GTP WMAPEV    R    N++ D+++ G+  
Sbjct: 173 DKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVL---RDEPSNEKSDVYSFGVIL 229
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            ELA LQ P  +L+P +   +++  GFK   L+     +      ++   T  P KRP+ 
Sbjct: 230 WELATLQQPWGNLNPAQ---VVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSF 286
Query: 189 DKLLQVI 195
             ++ ++
Sbjct: 287 ATIMDLL 293

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAV---ERKGGYNQQCDIWAVGITAI 129
           ++KL DFG S Q+     K +   GTP ++APE+      +   GY ++ D+W+ G+   
Sbjct: 149 NIKLTDFGFSCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 207
Query: 130 ELAELQPPMFDLHPMRALFL-MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            L    PP +  H  + L L M  SG       + D +S T  + V   L   P+KR TA
Sbjct: 208 TLLAGSPPFW--HRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTA 265
Query: 189 DKLL 192
           ++ L
Sbjct: 266 EEAL 269

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAV---ERKGGYNQQCDIWAVGITAI 129
           ++KL DFG S Q+     K +   GTP ++APE+      +   GY ++ D+W+ G+   
Sbjct: 162 NIKLTDFGFSCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220
Query: 130 ELAELQPPMFDLHPMRALFL-MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            L    PP +  H  + L L M  SG       + D +S T  + V   L   P+KR TA
Sbjct: 221 TLLAGSPPFW--HRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTA 278
Query: 189 DKLL 192
           ++ L
Sbjct: 279 EEAL 282

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  K +   VKLADFG++ ++         F GTP +++PEV    RK  Y +  D+WA 
Sbjct: 136 LASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL---RKDPYGKPVDMWAC 192
Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G+    L    PP +D    R L+   K+G       + D  +    + +   LT NP K
Sbjct: 193 GVILYILLVGYPPFWDEDQHR-LYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAK 251
Query: 185 RPTADKLLQ 193
           R TA + L+
Sbjct: 252 RITASEALK 260

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  K +   VKLADFG++ ++         F GTP +++PEV    RK  Y +  D+WA 
Sbjct: 136 LASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL---RKDPYGKPVDMWAC 192
Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G+    L    PP +D    R L+   K+G       + D  +    + +   LT NP K
Sbjct: 193 GVILYILLVGYPPFWDEDQHR-LYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAK 251
Query: 185 RPTADKLLQ 193
           R TA + L+
Sbjct: 252 RITASEALK 260

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G +K+ADFGVS +   +     + +GTP +MAPE  +  RK    +  D+WA+G+T    
Sbjct: 174 GHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCF 233
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
              Q P  D    R + L SK   +     D+   +    + +   L KNP+ R
Sbjct: 234 VFGQCPFMD---ERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESR 284

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 20/127 (15%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           +VK+ DFG++ ++     ++K+  GTP ++APEV +   K G++ + D+W++G     L 
Sbjct: 155 EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS---KKGHSFEVDVWSIGCIMYTLL 211
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFH------NFVKIALTKNPKKRP 186
             +PP F+   ++  +L  K          K+ +S   H      + ++  L  +P  RP
Sbjct: 212 VGKPP-FETSCLKETYLRIK----------KNEYSIPKHINPVAASLIQKMLQTDPTARP 260
Query: 187 TADKLLQ 193
           T ++LL 
Sbjct: 261 TINELLN 267

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 20/127 (15%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           +VK+ DFG++ ++     ++K+  GTP ++APEV +   K G++ + D+W++G     L 
Sbjct: 155 EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS---KKGHSFEVDVWSIGCIMYTLL 211
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFH------NFVKIALTKNPKKRP 186
             +PP F+   ++  +L  K          K+ +S   H      + ++  L  +P  RP
Sbjct: 212 VGKPP-FETSCLKETYLRIK----------KNEYSIPKHINPVAASLIQKMLQTDPTARP 260
Query: 187 TADKLLQ 193
           T ++LL 
Sbjct: 261 TINELLN 267

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 20/127 (15%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           +VK+ DFG++ ++     ++K+  GTP ++APEV +   K G++ + D+W++G     L 
Sbjct: 159 EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS---KKGHSFEVDVWSIGCIMYTLL 215
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFH------NFVKIALTKNPKKRP 186
             +PP F+   ++  +L  K          K+ +S   H      + ++  L  +P  RP
Sbjct: 216 VGKPP-FETSCLKETYLRIK----------KNEYSIPKHINPVAASLIQKMLQTDPTARP 264
Query: 187 TADKLLQ 193
           T ++LL 
Sbjct: 265 TINELLN 271

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 73/183 (39%), Gaps = 52/183 (28%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG--YNQQCDIWAVGITAI 129
           G++KL DFGVS Q+  ++    SF+GT  +MAPE     R  G  Y+ Q DIW++G++ +
Sbjct: 152 GEIKLCDFGVSGQLIDSMAN--SFVGTRSYMAPE-----RLQGTHYSVQSDIWSMGLSLV 204
Query: 130 ELAELQPPM------------------------------------------FDLHPMRAL 147
           ELA  + P+                                           D  P  A+
Sbjct: 205 ELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAI 264
Query: 148 F-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVE 206
           F L+     +PP       ++  F  FV   L KNP +R     L     I R+ V  V+
Sbjct: 265 FELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLTNHTFIKRSEVEEVD 324
Query: 207 RKG 209
             G
Sbjct: 325 FAG 327

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L+ K +  ++++ DFG+S    A+  K K  IGT Y++APEV      G Y+++CD+W+ 
Sbjct: 159 LESKSKDANIRIIDFGLSTHFEAS-KKXKDKIGTAYYIAPEVL----HGTYDEKCDVWST 213
Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKS--GFKPPALKDKDRWSSTFHNFVKIALTKNP 182
           G+    L    PP    +    L  + K    F+ P  K   + S +  + ++  LT  P
Sbjct: 214 GVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK---KVSESAKDLIRKXLTYVP 270
Query: 183 KKRPTA 188
             R +A
Sbjct: 271 SXRISA 276

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 48/179 (26%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG--YNQQCDIWAVGITAI 129
           G++KL DFGVS Q+  ++    SF+GT  +M+PE     R  G  Y+ Q DIW++G++ +
Sbjct: 142 GEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPE-----RLQGTHYSVQSDIWSMGLSLV 194
Query: 130 ELA----ELQPP-------MF---------------------------DLHPMRALF-LM 150
           E+A     + PP       MF                           D  P  A+F L+
Sbjct: 195 EMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELL 254
Query: 151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKG 209
                +PP       +S  F +FV   L KNP +R    +L+    I R+    V+  G
Sbjct: 255 DYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAG 313

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 48/179 (26%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG--YNQQCDIWAVGITAI 129
           G++KL DFGVS Q+  ++    SF+GT  +M+PE     R  G  Y+ Q DIW++G++ +
Sbjct: 142 GEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPE-----RLQGTHYSVQSDIWSMGLSLV 194
Query: 130 ELA----ELQPP-------MF---------------------------DLHPMRALF-LM 150
           E+A     + PP       MF                           D  P  A+F L+
Sbjct: 195 EMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELL 254
Query: 151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKG 209
                +PP       +S  F +FV   L KNP +R    +L+    I R+    V+  G
Sbjct: 255 DYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAG 313

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 48/179 (26%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG--YNQQCDIWAVGITAI 129
           G++KL DFGVS Q+  ++    SF+GT  +M+PE     R  G  Y+ Q DIW++G++ +
Sbjct: 142 GEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPE-----RLQGTHYSVQSDIWSMGLSLV 194
Query: 130 ELA----ELQPP-------MF---------------------------DLHPMRALF-LM 150
           E+A     + PP       MF                           D  P  A+F L+
Sbjct: 195 EMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELL 254
Query: 151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKG 209
                +PP       +S  F +FV   L KNP +R    +L+    I R+    V+  G
Sbjct: 255 DYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAG 313

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 48/179 (26%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG--YNQQCDIWAVGITAI 129
           G++KL DFGVS Q+  ++    SF+GT  +M+PE     R  G  Y+ Q DIW++G++ +
Sbjct: 142 GEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPE-----RLQGTHYSVQSDIWSMGLSLV 194
Query: 130 ELA----ELQPP-------MF---------------------------DLHPMRALF-LM 150
           E+A     + PP       MF                           D  P  A+F L+
Sbjct: 195 EMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELL 254
Query: 151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKG 209
                +PP       +S  F +FV   L KNP +R    +L+    I R+    V+  G
Sbjct: 255 DYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAG 313

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 20/127 (15%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           +VK+ DFG++ ++     ++K   GTP ++APEV +   K G++ + D+W++G     L 
Sbjct: 177 EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS---KKGHSFEVDVWSIGCIMYTLL 233
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFH------NFVKIALTKNPKKRP 186
             +PP F+   ++  +L  K          K+ +S   H      + ++  L  +P  RP
Sbjct: 234 VGKPP-FETSCLKETYLRIK----------KNEYSIPKHINPVAASLIQKMLQTDPTARP 282
Query: 187 TADKLLQ 193
           T ++LL 
Sbjct: 283 TINELLN 289

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 80/189 (42%), Gaps = 54/189 (28%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG--YNQQCDIWAVGITAI 129
           G++KL DFGVS Q+  ++    SF+GT  +M+PE     R  G  Y+ Q DIW++G++ +
Sbjct: 169 GEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE-----RLQGTHYSVQSDIWSMGLSLV 221
Query: 130 ELA----ELQPP-------MF---------------------------DLHPMRALF-LM 150
           E+A     + PP       MF                           D  P  A+F L+
Sbjct: 222 EMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELL 281
Query: 151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKG- 209
                +PP       +S  F +FV   L KNP +R    +L+    I R+    V+  G 
Sbjct: 282 DYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGW 341
Query: 210 -----GYNQ 213
                G NQ
Sbjct: 342 LCSTIGLNQ 350

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 20/127 (15%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           +VK+ DFG++ ++     ++K   GTP ++APEV +   K G++ + D+W++G     L 
Sbjct: 179 EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS---KKGHSFEVDVWSIGCIMYTLL 235
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFH------NFVKIALTKNPKKRP 186
             +PP F+   ++  +L  K          K+ +S   H      + ++  L  +P  RP
Sbjct: 236 VGKPP-FETSCLKETYLRIK----------KNEYSIPKHINPVAASLIQKMLQTDPTARP 284
Query: 187 TADKLLQ 193
           T ++LL 
Sbjct: 285 TINELLN 291

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 20/126 (15%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           +VK+ DFG++ ++     ++K   GTP ++APEV +   K G++ + D+W++G     L 
Sbjct: 153 EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS---KKGHSFEVDVWSIGCIMYTLL 209
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFH------NFVKIALTKNPKKRP 186
             +PP F+   ++  +L  K          K+ +S   H      + ++  L  +P  RP
Sbjct: 210 VGKPP-FETSCLKETYLRIK----------KNEYSIPKHINPVAASLIQKMLQTDPTARP 258
Query: 187 TADKLL 192
           T ++LL
Sbjct: 259 TINELL 264

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 48/179 (26%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG--YNQQCDIWAVGITAI 129
           G++KL DFGVS Q+  ++    SF+GT  +M+PE     R  G  Y+ Q DIW++G++ +
Sbjct: 204 GEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPE-----RLQGTHYSVQSDIWSMGLSLV 256
Query: 130 ELA----ELQPP-------MF---------------------------DLHPMRALF-LM 150
           E+A     + PP       MF                           D  P  A+F L+
Sbjct: 257 EMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELL 316
Query: 151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKG 209
                +PP       +S  F +FV   L KNP +R    +L+    I R+    V+  G
Sbjct: 317 DYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAG 375

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L+ K +  ++++ DFG+S    A+  K K  IGT Y++APEV      G Y+++CD+W+ 
Sbjct: 159 LESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVL----HGTYDEKCDVWST 213
Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKS--GFKPPALKDKDRWSSTFHNFVKIALTKNP 182
           G+    L    PP    +    L  + K    F+ P  K   + S +  + ++  LT  P
Sbjct: 214 GVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK---KVSESAKDLIRKMLTYVP 270
Query: 183 KKRPTA 188
             R +A
Sbjct: 271 SMRISA 276

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L+ K +  ++++ DFG+S    A+  K K  IGT Y++APEV      G Y+++CD+W+ 
Sbjct: 183 LESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVL----HGTYDEKCDVWST 237
Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKS--GFKPPALKDKDRWSSTFHNFVKIALTKNP 182
           G+    L    PP    +    L  + K    F+ P  K   + S +  + ++  LT  P
Sbjct: 238 GVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK---KVSESAKDLIRKMLTYVP 294
Query: 183 KKRPTA 188
             R +A
Sbjct: 295 SMRISA 300

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L+ K +  ++++ DFG+S    A+  K K  IGT Y++APEV      G Y+++CD+W+ 
Sbjct: 182 LESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVL----HGTYDEKCDVWST 236
Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKS--GFKPPALKDKDRWSSTFHNFVKIALTKNP 182
           G+    L    PP    +    L  + K    F+ P  K   + S +  + ++  LT  P
Sbjct: 237 GVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK---KVSESAKDLIRKMLTYVP 293
Query: 183 KKRPTA 188
             R +A
Sbjct: 294 SMRISA 299

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L+ K +  ++++ DFG+S    A+  K K  IGT Y++APEV      G Y+++CD+W+ 
Sbjct: 165 LESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVL----HGTYDEKCDVWST 219
Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKS--GFKPPALKDKDRWSSTFHNFVKIALTKNP 182
           G+    L    PP    +    L  + K    F+ P  K   + S +  + ++  LT  P
Sbjct: 220 GVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK---KVSESAKDLIRKMLTYVP 276
Query: 183 KKRPTA 188
             R +A
Sbjct: 277 SMRISA 282

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L++K+   ++K+ DFG+S+  +    K +  +GT Y++APEV     K  YN++CD+W+ 
Sbjct: 179 LENKNSLLNIKIVDFGLSSFFSKDY-KLRDRLGTAYYIAPEVL----KKKYNEKCDVWSC 233
Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G+    L    PP F     + +    + G       D    S      +K+ LT +  K
Sbjct: 234 GVIMYILLCGYPP-FGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNK 292
Query: 185 RPTADKLL 192
           R TA++ L
Sbjct: 293 RCTAEEAL 300

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 20/126 (15%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           DVK+ DFG++ +I     ++K+  GTP ++APEV     K G++ + DIW++G     L 
Sbjct: 180 DVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLC---KKGHSFEVDIWSLGCILYTLL 236
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFH------NFVKIALTKNPKKRP 186
             +PP F+   ++  ++  K          K+ +S   H        ++  L  +P  RP
Sbjct: 237 VGKPP-FETSCLKETYIRIK----------KNEYSVPRHINPVASALIRRMLHADPTLRP 285
Query: 187 TADKLL 192
           +  +LL
Sbjct: 286 SVAELL 291

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ADFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIKVADFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ADFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 176 DQQGYIKVADFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 229
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 280

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 20/126 (15%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           DVK+ DFG++ +I     ++K   GTP ++APEV     K G++ + DIW++G     L 
Sbjct: 164 DVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC---KKGHSFEVDIWSLGCILYTLL 220
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFH------NFVKIALTKNPKKRP 186
             +PP F+   ++  ++  K          K+ +S   H        ++  L  +P  RP
Sbjct: 221 VGKPP-FETSCLKETYIRIK----------KNEYSVPRHINPVASALIRRMLHADPTLRP 269
Query: 187 TADKLL 192
           +  +LL
Sbjct: 270 SVAELL 275

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ADFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIKVADFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ADFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIKVADFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 20/126 (15%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           DVK+ DFG++ +I     ++K   GTP ++APEV     K G++ + DIW++G     L 
Sbjct: 180 DVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC---KKGHSFEVDIWSLGCILYTLL 236
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFH------NFVKIALTKNPKKRP 186
             +PP F+   ++  ++  K          K+ +S   H        ++  L  +P  RP
Sbjct: 237 VGKPP-FETSCLKETYIRIK----------KNEYSVPRHINPVASALIRRMLHADPTLRP 285
Query: 187 TADKLL 192
           +  +LL
Sbjct: 286 SVAELL 291

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 20/126 (15%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           DVK+ DFG++ +I     ++K   GTP ++APEV     K G++ + DIW++G     L 
Sbjct: 180 DVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLC---KKGHSFEVDIWSLGCILYTLL 236
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFH------NFVKIALTKNPKKRP 186
             +PP F+   ++  ++  K          K+ +S   H        ++  L  +P  RP
Sbjct: 237 VGKPP-FETSCLKETYIRIK----------KNEYSVPRHINPVASALIRRMLHADPTLRP 285
Query: 187 TADKLL 192
           +  +LL
Sbjct: 286 SVAELL 291

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 51  ALFLMSKSGFKPPALKDK----DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEV 106
            LF + K G     LK      D  G +K+ADFG+  +        + F GTP ++APE+
Sbjct: 132 GLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEI 191
Query: 107 AAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF--LMSKSGFKPPALKDKD 164
            A +    Y +  D WA G+   E+   QPP FD      LF  +M  +   P +L    
Sbjct: 192 IAYQP---YGKSVDWWAYGVLLYEMLAGQPP-FDGEDEDELFQSIMEHNVSYPKSL---- 243
Query: 165 RWSSTFHNFVKIALTKNPKKR 185
             S    +  K  +TK+P KR
Sbjct: 244 --SKEAVSICKGLMTKHPAKR 262

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           GD+K+ DFG+S +I      R+  +GTP ++APE+   +         D+W +GI A  L
Sbjct: 171 GDIKIVDFGMSRKIGHACELRE-IMGTPEYLAPEILNYD---PITTATDMWNIGIIAYML 226
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFH---NFVKIALTKNPKKRPTA 188
                P            +S+          ++ +SS      +F++  L KNP+KRPTA
Sbjct: 227 LTHTSPFVGEDNQETYLNISQVNVD----YSEETFSSVSQLATDFIQSLLVKNPEKRPTA 282
Query: 189 DKLL 192
           +  L
Sbjct: 283 EICL 286

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG++ ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIKVTDFGLAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L+ K++   +K+ DFG+SA +     K K  +GT Y++APEV     +  Y+++CD+W++
Sbjct: 169 LESKEKDALIKIVDFGLSA-VFENQKKMKERLGTAYYIAPEVL----RKKYDEKCDVWSI 223
Query: 125 GITAIELAELQPP 137
           G+    L    PP
Sbjct: 224 GVILFILLAGYPP 236

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G+V+++D G++ ++ A   K K + GTP +MAPE+   E    Y+   D +A+G+T 
Sbjct: 323 DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE---YDFSVDYFALGVTL 379
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P F     +      K      A+   D++S    +F +  L K+P+KR
Sbjct: 380 YEMIAARGP-FRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G+V+++D G++ ++ A   K K + GTP +MAPE+   E    Y+   D +A+G+T 
Sbjct: 323 DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE---YDFSVDYFALGVTL 379
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P F     +      K      A+   D++S    +F +  L K+P+KR
Sbjct: 380 YEMIAARGP-FRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G+V+++D G++ ++ A   K K + GTP +MAPE+   E    Y+   D +A+G+T 
Sbjct: 323 DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE---YDFSVDYFALGVTL 379
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P F     +      K      A+   D++S    +F +  L K+P+KR
Sbjct: 380 YEMIAARGP-FRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G+V+++D G++ ++ A   K K + GTP +MAPE+   E    Y+   D +A+G+T 
Sbjct: 323 DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE---YDFSVDYFALGVTL 379
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P F     +      K      A+   D++S    +F +  L K+P+KR
Sbjct: 380 YEMIAARGP-FRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 176 DQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 229
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 280

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 176 DQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 229
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 280

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 176 DQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 229
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 280

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 176 DQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 229
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 280

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 74  VKLADFGVSAQIT--ATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++ + +  +  ++ +   G+  WMAPEV  ++ K  Y+ Q D++A GI   EL
Sbjct: 171 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 230
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPAL-KDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
              Q P  +++    +  M   G+  P L K +          +   L K   +RP   +
Sbjct: 231 MTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQ 290
Query: 191 LLQVI 195
           +L  I
Sbjct: 291 ILASI 295

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 74  VKLADFGVSAQIT--ATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++ + +  +  ++ +   G+  WMAPEV  ++ K  Y+ Q D++A GI   EL
Sbjct: 163 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 222
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPAL-KDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
              Q P  +++    +  M   G+  P L K +          +   L K   +RP   +
Sbjct: 223 MTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQ 282
Query: 191 LLQVI 195
           +L  I
Sbjct: 283 ILASI 287

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +  +  GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 161 DQQGYIQVTDFGFAKRVKG---RTWTLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 214
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 215 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 265

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +  +  GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 176 DQQGYIQVTDFGFAKRVKG---RTWTLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 229
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 280

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 74  VKLADFGVSAQIT--ATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++ + +  +  ++ +   G+  WMAPEV  ++ K  Y+ Q D++A GI   EL
Sbjct: 143 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPAL-KDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
              Q P  +++    +  M   G+  P L K +          +   L K   +RP   +
Sbjct: 203 MTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQ 262
Query: 191 LLQVI 195
           +L  I
Sbjct: 263 ILASI 267

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG++ ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGLAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +KL DFG++ +I A  N+ K+  GTP ++APE+   E  G    + D+W++G+    L  
Sbjct: 151 IKLIDFGIAHKIEAG-NEFKNIFGTPEFVAPEIVNYEPLG---LEADMWSIGVITYILLS 206
Query: 134 LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFH---NFVKIALTKNPKKRPTADK 190
              P         L  +S   +      D++ +S+T     +F++  L K+PK+R T  +
Sbjct: 207 GASPFLGETKQETLTNISAVNYDF----DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQ 262
Query: 191 LLQ 193
            L+
Sbjct: 263 SLE 265

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +KL DFG++A+       R   +GTPY+++P+V     +G Y  +CD W+ G+    L  
Sbjct: 165 LKLIDFGLAARFKPGKMMRTK-VGTPYYVSPQVL----EGLYGPECDEWSAGVMMYVLLC 219
Query: 134 LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
             PP         +  + +  F  P  KD    S    + ++  LTK+PK+R T+ + L+
Sbjct: 220 GYPPFSAPTDXEVMLKIREGTFTFPE-KDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 278

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +KL DFG++A+       R   +GTPY+++P+V     +G Y  +CD W+ G+    L  
Sbjct: 148 LKLIDFGLAARFKPGKMMRTK-VGTPYYVSPQVL----EGLYGPECDEWSAGVMMYVLLC 202
Query: 134 LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
             PP         +  + +  F  P  KD    S    + ++  LTK+PK+R T+ + L+
Sbjct: 203 GYPPFSAPTDXEVMLKIREGTFTFPE-KDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++        +  GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 196 DQQGYIQVTDFGFAKRVKGAT---WTLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 249
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 250 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 300

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 74  VKLADFGVSAQITATINKR-------KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           VK+ DFG+     AT+  R       +   G+  WMAPEV  ++ K  Y+ Q D++A GI
Sbjct: 171 VKIGDFGL-----ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 225
Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL-KDKDRWSSTFHNFVKIALTKNPKKR 185
              EL   Q P  +++    +  M   G+  P L K +          +   L K   +R
Sbjct: 226 VLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 285
Query: 186 PTADKLLQVI 195
           P   ++L  I
Sbjct: 286 PLFPQILASI 295

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 74  VKLADFGVSAQITATINKR-------KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           VK+ DFG+     AT+  R       +   G+  WMAPEV  ++ K  Y+ Q D++A GI
Sbjct: 170 VKIGDFGL-----ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 224
Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL-KDKDRWSSTFHNFVKIALTKNPKKR 185
              EL   Q P  +++    +  M   G+  P L K +          +   L K   +R
Sbjct: 225 VLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 284
Query: 186 PTADKLLQVI 195
           P   ++L  I
Sbjct: 285 PLFPQILASI 294

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E+A   PP F   P++    +     + P+    D       N +++ LTK     P  
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTKRFGNLPNG 287

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 74  VKLADFGVSAQITATINKRKS-------FIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           VK+ DFG+     AT+  R S         G+  WMAPEV  ++ K  Y+ Q D++A GI
Sbjct: 145 VKIGDFGL-----ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 199
Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL-KDKDRWSSTFHNFVKIALTKNPKKR 185
              EL   Q P  +++    +  M   G+  P L K +          +   L K   +R
Sbjct: 200 VLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 259
Query: 186 PTADKLLQVI 195
           P   ++L  I
Sbjct: 260 PLFPQILASI 269

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 168 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 221
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 222 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 272

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 74  VKLADFGVSAQITATINKRKS-------FIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           VK+ DFG+     AT+  R S         G+  WMAPEV  ++ K  Y+ Q D++A GI
Sbjct: 148 VKIGDFGL-----ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 202
Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL-KDKDRWSSTFHNFVKIALTKNPKKR 185
              EL   Q P  +++    +  M   G+  P L K +          +   L K   +R
Sbjct: 203 VLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 262
Query: 186 PTADKLLQVI 195
           P   ++L  I
Sbjct: 263 PLFPQILASI 272

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 74  VKLADFGVSAQITATINKRKS-------FIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           VK+ DFG+     AT+  R S         G+  WMAPEV  ++ K  Y+ Q D++A GI
Sbjct: 148 VKIGDFGL-----ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 202
Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL-KDKDRWSSTFHNFVKIALTKNPKKR 185
              EL   Q P  +++    +  M   G+  P L K +          +   L K   +R
Sbjct: 203 VLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 262
Query: 186 PTADKLLQVI 195
           P   ++L  I
Sbjct: 263 PLFPQILASI 272

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 74  VKLADFGVSAQITATINKRKS-------FIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           VK+ DFG+     AT+  R S         G+  WMAPEV  ++ K  Y+ Q D++A GI
Sbjct: 143 VKIGDFGL-----ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 197
Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL-KDKDRWSSTFHNFVKIALTKNPKKR 185
              EL   Q P  +++    +  M   G+  P L K +          +   L K   +R
Sbjct: 198 VLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 257
Query: 186 PTADKLLQVI 195
           P   ++L  I
Sbjct: 258 PLFPQILASI 267

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIIISK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 74  VKLADFGVSAQITATINKRKS-------FIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           VK+ DFG+     AT+  R S         G+  WMAPEV  ++ K  Y+ Q D++A GI
Sbjct: 143 VKIGDFGL-----ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 197
Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL-KDKDRWSSTFHNFVKIALTKNPKKR 185
              EL   Q P  +++    +  M   G+  P L K +          +   L K   +R
Sbjct: 198 VLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 257
Query: 186 PTADKLLQVI 195
           P   ++L  I
Sbjct: 258 PLFPQILASI 267

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 176 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 229
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 280

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 168 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 221
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 222 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 272

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 196 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 249
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 250 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 300

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 176 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 229
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 280

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 176 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 229
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 280

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 176 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 229
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 280

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 170 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 223
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 224 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 274

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 176 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 229
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 280

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 64  ALKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPY---WMAPEVAAVERKGGYNQQCD 120
            L D+D C  VK++DFG++  +    ++  S +GT +   W APEV    +   Y+ + D
Sbjct: 135 CLVDRDLC--VKVSDFGMTRYVLD--DQYVSSVGTKFPVKWSAPEVFHYFK---YSSKSD 187
Query: 121 IWAVGITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKDKDRWSSTFHNFVKIA 177
           +WA GI   E+  L    +DL+    + L    G   ++P    D      T +  +   
Sbjct: 188 VWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASD------TIYQIMYSC 241
Query: 178 LTKNPKKRPTADKLLQVI 195
             + P+KRPT  +LL  I
Sbjct: 242 WHELPEKRPTFQQLLSSI 259

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 176 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 229
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 280

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 196 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 249
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 250 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 300

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLXGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 35/202 (17%)
Query: 69  DRCGDVKLADFGVSAQITAT-INKRKSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGI 126
           D+ G +KLADFG   ++  T +    + +GTP +++PEV   +   GY  ++CD W+VG+
Sbjct: 208 DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 267
Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
              E+                 L+  + F   +L     +S    +   +   ++ +   
Sbjct: 268 FLFEM-----------------LVGDTPFYADSLVGT--YSKIMDHKNSLCFPEDAEISK 308
Query: 187 TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK-----YDMSKRVAIELLQKVSN 241
            A  L+   L  R      E + G N   +I  HPFFK     +D  +  A  ++ ++S+
Sbjct: 309 HAKNLICAFLTDR------EVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSS 362
Query: 242 --PPTTYTDLEPDDDGEIPNVP 261
               + + D+E DD G++   P
Sbjct: 363 DIDSSNFDDIE-DDKGDVETFP 383

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLAGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           LAEL   +  LH +  ++       KP  +   D  G +KL DFG+S +      K  SF
Sbjct: 133 LAELALALDHLHSLGIIY----RDLKPENIL-LDEEGHIKLTDFGLSKESIDHEKKAYSF 187
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
            GT  +MAPEV  V R+ G+ Q  D W+ G+   E+
Sbjct: 188 CGTVEYMAPEV--VNRR-GHTQSADWWSFGVLMFEM 220

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           LAEL   +  LH +  ++       KP  +   D  G +KL DFG+S +      K  SF
Sbjct: 132 LAELALALDHLHSLGIIY----RDLKPENIL-LDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
            GT  +MAPEV  V R+ G+ Q  D W+ G+   E+
Sbjct: 187 CGTVEYMAPEV--VNRR-GHTQSADWWSFGVLMFEM 219

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 162 DEQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 215
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 216 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 266

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D    + ++DFG+S ++    +   +  GTP ++APEV A   +  Y++  D W++G+ A
Sbjct: 153 DEDSKIMISDFGLS-KMEDPGSVLSTACGTPGYVAPEVLA---QKPYSKAVDCWSIGVIA 208
Query: 129 IELAELQPPMFDLHPMRAL--FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
             L    PP +D +  +     L ++  F  P   D    S +  +F++  + K+P+KR 
Sbjct: 209 YILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD---ISDSAKDFIRHLMEKDPEKRF 265
Query: 187 TADKLLQ 193
           T ++ LQ
Sbjct: 266 TCEQALQ 272

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           LAEL   +  LH +  ++       KP  +   D  G +KL DFG+S +      K  SF
Sbjct: 132 LAELALALDHLHSLGIIY----RDLKPENIL-LDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
            GT  +MAPEV  V R+ G+ Q  D W+ G+   E+
Sbjct: 187 CGTVEYMAPEV--VNRR-GHTQSADWWSFGVLMFEM 219

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           ++K+ADFG S + T   NK  +F G+P + APE+   ++  G   + D+W++G+    L 
Sbjct: 151 NIKIADFGFSNEFTFG-NKLDTFCGSPPYAAPELFQGKKYDG--PEVDVWSLGVILYTLV 207
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR----WSSTFHNFVKIALTKNPKKRPTA 188
               P FD   ++ L        +   L+ K R     S+   N +K  L  NP KR T 
Sbjct: 208 SGSLP-FDGQNLKEL--------RERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTL 258
Query: 189 DKLLQ 193
           +++++
Sbjct: 259 EQIMK 263

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           ++K+ADFG S + T   NK  +F G+P + APE+   ++  G   + D+W++G+    L 
Sbjct: 151 NIKIADFGFSNEFTFG-NKLDTFCGSPPYAAPELFQGKKYDG--PEVDVWSLGVILYTLV 207
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR----WSSTFHNFVKIALTKNPKKRPTA 188
               P FD   ++ L        +   L+ K R     S+   N +K  L  NP KR T 
Sbjct: 208 SGSLP-FDGQNLKEL--------RERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTL 258
Query: 189 DKLLQ 193
           +++++
Sbjct: 259 EQIMK 263

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           ++K+ADFG S + T   NK  +F G+P + APE+   ++  G   + D+W++G+    L 
Sbjct: 151 NIKIADFGFSNEFTFG-NKLDTFCGSPPYAAPELFQGKKYDG--PEVDVWSLGVILYTLV 207
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR----WSSTFHNFVKIALTKNPKKRPTA 188
               P FD   ++ L        +   L+ K R     S+   N +K  L  NP KR T 
Sbjct: 208 SGSLP-FDGQNLKEL--------RERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTL 258
Query: 189 DKLLQ 193
           +++++
Sbjct: 259 EQIMK 263

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           L  LQ   FDL P   + L+ ++  KP           +K+ DFG++ +I    N+ K+ 
Sbjct: 130 LHSLQIAHFDLKP-ENIMLLDRNVPKPR----------IKIIDFGLAHKIDFG-NEFKNI 177
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF 155
            GTP ++APE+   E  G    + D+W++G+    L     P         L  +S   +
Sbjct: 178 FGTPEFVAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 156 KPPALKDK--DRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           +    +D+     S+   +F++  L K+PKKR T    LQ
Sbjct: 235 E---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           ++K+ADFG S + T   NK  +F G+P + APE+   ++  G   + D+W++G+    L 
Sbjct: 144 NIKIADFGFSNEFTFG-NKLDTFCGSPPYAAPELFQGKKYDG--PEVDVWSLGVILYTLV 200
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR----WSSTFHNFVKIALTKNPKKRPTA 188
               P FD   ++ L        +   L+ K R     S+   N +K  L  NP KR T 
Sbjct: 201 SGSLP-FDGQNLKEL--------RERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTL 251
Query: 189 DKLLQ 193
           +++++
Sbjct: 252 EQIMK 256

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D    + ++DFG+S ++    +   +  GTP ++APEV A   +  Y++  D W++G+ A
Sbjct: 153 DEDSKIMISDFGLS-KMEDPGSVLSTACGTPGYVAPEVLA---QKPYSKAVDCWSIGVIA 208
Query: 129 IELAELQPPMFDLHPMRAL--FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
             L    PP +D +  +     L ++  F  P   D    S +  +F++  + K+P+KR 
Sbjct: 209 YILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD---ISDSAKDFIRHLMEKDPEKRF 265
Query: 187 TADKLLQ 193
           T ++ LQ
Sbjct: 266 TCEQALQ 272

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           L  LQ   FDL P   + L+ ++  KP           +K+ DFG++ +I    N+ K+ 
Sbjct: 130 LHSLQIAHFDLKP-ENIMLLDRNVPKPR----------IKIIDFGLAHKIDFG-NEFKNI 177
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF 155
            GTP ++APE+   E  G    + D+W++G+    L     P         L  +S   +
Sbjct: 178 FGTPEFVAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 156 KPPALKDK--DRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           +    +D+     S+   +F++  L K+PKKR T    LQ
Sbjct: 235 E---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           L  LQ   FDL P   + L+ ++  KP           +K+ DFG++ +I    N+ K+ 
Sbjct: 130 LHSLQIAHFDLKP-ENIMLLDRNVPKPR----------IKIIDFGLAHKIDFG-NEFKNI 177
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF 155
            GTP ++APE+   E  G    + D+W++G+    L     P         L  +S   +
Sbjct: 178 FGTPEFVAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 156 KPPALKDK--DRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           +    +D+     S+   +F++  L K+PKKR T    LQ
Sbjct: 235 E---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 68  KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT 127
           K++   +KL DFG + + T   N  ++   TPY++APEV   E+   Y++ CD+W++G+ 
Sbjct: 164 KEKDAVLKLTDFGFAKETTQ--NALQTPCYTPYYVAPEVLGPEK---YDKSCDMWSLGVI 218
Query: 128 AIELAELQPPMFD-----LHP-MRALFLMSKSGFKPPALKDKDRWSSTFHN---FVKIAL 178
              L    PP +      + P M+    + + GF  P       WS    +    +++ L
Sbjct: 219 MYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP------EWSEVSEDAKQLIRLLL 272
Query: 179 TKNPKKRPTADKLLQVILIHRARVA 203
             +P +R T  + +    I+++ V 
Sbjct: 273 KTDPTERLTITQFMNHPWINQSMVV 297

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D    + ++DFG+S ++    +   +  GTP ++APEV A   +  Y++  D W++G+ A
Sbjct: 153 DEDSKIMISDFGLS-KMEDPGSVLSTACGTPGYVAPEVLA---QKPYSKAVDCWSIGVIA 208
Query: 129 IELAELQPPMFDLHPMRAL--FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
             L    PP +D +  +     L ++  F  P   D    S +  +F++  + K+P+KR 
Sbjct: 209 YILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD---ISDSAKDFIRHLMEKDPEKRF 265
Query: 187 TADKLLQ 193
           T ++ LQ
Sbjct: 266 TCEQALQ 272

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           L  LQ   FDL P   + L+ ++  KP           +K+ DFG++ +I    N+ K+ 
Sbjct: 130 LHSLQIAHFDLKP-ENIMLLDRNVPKPR----------IKIIDFGLAHKIDFG-NEFKNI 177
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF 155
            GTP ++APE+   E  G    + D+W++G+    L     P         L  +S   +
Sbjct: 178 FGTPEFVAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 156 KPPALKDK--DRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           +    +D+     S+   +F++  L K+PKKR T    LQ
Sbjct: 235 E---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 68  KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT 127
           K++   +KL DFG + + T   N  ++   TPY++APEV   E+   Y++ CD+W++G+ 
Sbjct: 145 KEKDAVLKLTDFGFAKETTQ--NALQTPCYTPYYVAPEVLGPEK---YDKSCDMWSLGVI 199
Query: 128 AIELAELQPPMFD-----LHP-MRALFLMSKSGFKPPALKDKDRWSSTFHN---FVKIAL 178
              L    PP +      + P M+    + + GF  P       WS    +    +++ L
Sbjct: 200 MYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP------EWSEVSEDAKQLIRLLL 253
Query: 179 TKNPKKRPTADKLLQVILIHRARVA 203
             +P +R T  + +    I+++ V 
Sbjct: 254 KTDPTERLTITQFMNHPWINQSMVV 278

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D    + ++DFG+S ++    +   +  GTP ++APEV A   +  Y++  D W++G+ A
Sbjct: 153 DEDSKIMISDFGLS-KMEDPGSVLSTACGTPGYVAPEVLA---QKPYSKAVDCWSIGVIA 208
Query: 129 IELAELQPPMFDLHPMRAL--FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
             L    PP +D +  +     L ++  F  P   D    S +  +F++  + K+P+KR 
Sbjct: 209 YILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD---ISDSAKDFIRHLMEKDPEKRF 265
Query: 187 TADKLLQ 193
           T ++ LQ
Sbjct: 266 TCEQALQ 272

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           L  LQ   FDL P   + L+ ++  KP           +K+ DFG++ +I    N+ K+ 
Sbjct: 130 LHSLQIAHFDLKP-ENIMLLDRNVPKPR----------IKIIDFGLAHKIDFG-NEFKNI 177
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF 155
            GTP ++APE+   E  G    + D+W++G+    L     P         L  +S   +
Sbjct: 178 FGTPEFVAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 156 KPPALKDK--DRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           +    +D+     S+   +F++  L K+PKKR T    LQ
Sbjct: 235 E---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           L  LQ   FDL P   + L+ ++  KP           +K+ DFG++ +I    N+ K+ 
Sbjct: 129 LHSLQIAHFDLKP-ENIMLLDRNVPKPR----------IKIIDFGLAHKIDFG-NEFKNI 176
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF 155
            GTP ++APE+   E  G    + D+W++G+    L     P         L  +S   +
Sbjct: 177 FGTPEFVAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 233
Query: 156 KPPALKDK--DRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           +    +D+     S+   +F++  L K+PKKR T    LQ
Sbjct: 234 E---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           L  LQ   FDL P   + L+ ++  KP           +K+ DFG++ +I    N+ K+ 
Sbjct: 130 LHSLQIAHFDLKP-ENIMLLDRNVPKPR----------IKIIDFGLAHKIDFG-NEFKNI 177
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF 155
            GTP ++APE+   E  G    + D+W++G+    L     P         L  +S   +
Sbjct: 178 FGTPEFVAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 156 KPPALKDK--DRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           +    +D+     S+   +F++  L K+PKKR T    LQ
Sbjct: 235 E---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           L  LQ   FDL P   + L+ ++  KP           +K+ DFG++ +I    N+ K+ 
Sbjct: 130 LHSLQIAHFDLKP-ENIMLLDRNVPKPR----------IKIIDFGLAHKIDFG-NEFKNI 177
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF 155
            GTP ++APE+   E  G    + D+W++G+    L     P         L  +S   +
Sbjct: 178 FGTPAFVAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 156 KPPALKDK--DRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           +    +D+     S+   +F++  L K+PKKR T    LQ
Sbjct: 235 E---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           L  LQ   FDL P   + L+ ++  KP           +K+ DFG++ +I    N+ K+ 
Sbjct: 130 LHSLQIAHFDLKP-ENIMLLDRNVPKPR----------IKIIDFGLAHKIDFG-NEFKNI 177
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF 155
            GTP ++APE+   E  G    + D+W++G+    L     P         L  +S   +
Sbjct: 178 FGTPEFVAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 156 KPPALKDK--DRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           +    +D+     S+   +F++  L K+PKKR T    LQ
Sbjct: 235 E---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           L  LQ   FDL P   + L+ ++  KP           +K+ DFG++ +I    N+ K+ 
Sbjct: 130 LHSLQIAHFDLKP-ENIMLLDRNVPKPR----------IKIIDFGLAHKIDFG-NEFKNI 177
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF 155
            GTP ++APE+   E  G    + D+W++G+    L     P         L  +S   +
Sbjct: 178 FGTPEFVAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 156 KPPALKDK--DRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           +    +D+     S+   +F++  L K+PKKR T    LQ
Sbjct: 235 E---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           L  LQ   FDL P   + L+ ++  KP           +K+ DFG++ +I    N+ K+ 
Sbjct: 129 LHSLQIAHFDLKP-ENIMLLDRNVPKPR----------IKIIDFGLAHKIDFG-NEFKNI 176
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF 155
            GTP ++APE+   E  G    + D+W++G+    L     P         L  +S   +
Sbjct: 177 FGTPEFVAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 233
Query: 156 KPPALKDK--DRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           +    +D+     S+   +F++  L K+PKKR T    LQ
Sbjct: 234 E---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           ++K+ADFG S + T   NK   F G+P + APE+   ++  G   + D+W++G+    L 
Sbjct: 151 NIKIADFGFSNEFTFG-NKLDEFCGSPPYAAPELFQGKKYDG--PEVDVWSLGVILYTLV 207
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR----WSSTFHNFVKIALTKNPKKRPTA 188
               P FD   ++ L        +   L+ K R     S+   N +K  L  NP KR T 
Sbjct: 208 SGSLP-FDGQNLKEL--------RERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTL 258
Query: 189 DKLLQ 193
           +++++
Sbjct: 259 EQIMK 263

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           L  LQ   FDL P   + L+ ++  KP           +K+ DFG++ +I    N+ K+ 
Sbjct: 130 LHSLQIAHFDLKP-ENIMLLDRNVPKPR----------IKIIDFGLAHKIDFG-NEFKNI 177
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF 155
            GTP ++APE+   E  G    + D+W++G+    L     P         L  +S   +
Sbjct: 178 FGTPEFVAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 156 KPPALKDK--DRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           +    +D+     S+   +F++  L K+PKKR T    LQ
Sbjct: 235 E---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           L  LQ   FDL P   + L+ ++  KP           +K+ DFG++ +I    N+ K+ 
Sbjct: 130 LHSLQIAHFDLKP-ENIMLLDRNVPKPR----------IKIIDFGLAHKIDFG-NEFKNI 177
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF 155
            GTP ++APE+   E  G    + D+W++G+    L     P         L  +S   +
Sbjct: 178 FGTPEFVAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 156 KPPALKDK--DRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           +    +D+     S+   +F++  L K+PKKR T    LQ
Sbjct: 235 E---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +KL DFG++ +I A  N+ K+  GTP ++APE+   E  G    + D+W++G+    L  
Sbjct: 172 IKLIDFGIAHKIEAG-NEFKNIFGTPEFVAPEIVNYEPLG---LEADMWSIGVITYILLS 227
Query: 134 LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFH---NFVKIALTKNPKKR 185
              P         L  +S   +      D++ +S+T     +F++  L K+PK+R
Sbjct: 228 GASPFLGETKQETLTNISAVNYDF----DEEYFSNTSELAKDFIRRLLVKDPKRR 278

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +KL DFG++ +I A  N+ K+  GTP ++APE+   E  G    + D+W++G+    L  
Sbjct: 158 IKLIDFGIAHKIEAG-NEFKNIFGTPEFVAPEIVNYEPLG---LEADMWSIGVITYILLS 213
Query: 134 LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFH---NFVKIALTKNPKKR 185
              P         L  +S   +      D++ +S+T     +F++  L K+PK+R
Sbjct: 214 GASPFLGETKQETLTNISAVNYDF----DEEYFSNTSELAKDFIRRLLVKDPKRR 264

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            ++A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YQMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           L  LQ   FDL P   + L+ ++  KP           +K+ DFG++ +I    N+ K+ 
Sbjct: 130 LHSLQIAHFDLKP-ENIMLLDRNVPKPR----------IKIIDFGLAHKIDFG-NEFKNI 177
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF 155
            GTP ++APE+   E  G    + D+W++G+    L     P         L  +S   +
Sbjct: 178 FGTPEFVAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 156 KPPALKDK--DRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           +    +D+     S+   +F++  L K+PKKR T    LQ
Sbjct: 235 E---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           ++K+ADFG S + T   NK  +F G P + APE+   ++  G   + D+W++G+    L 
Sbjct: 151 NIKIADFGFSNEFTFG-NKLDAFCGAPPYAAPELFQGKKYDG--PEVDVWSLGVILYTLV 207
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR----WSSTFHNFVKIALTKNPKKRPTA 188
               P FD   ++ L        +   L+ K R     S+   N +K  L  NP KR T 
Sbjct: 208 SGSLP-FDGQNLKEL--------RERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTL 258
Query: 189 DKLLQ 193
           +++++
Sbjct: 259 EQIMK 263

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 35/194 (18%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSF-IGTPYWMAPEV--AAVERKGGYNQQCDIWAVG 125
           D  G ++LADFG   ++      + S  +GTP +++PE+  A    KG Y  +CD W++G
Sbjct: 209 DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLG 268
Query: 126 ITAIELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPK 183
           +   E+   + P +   L       +  K  F+ P                    T+   
Sbjct: 269 VCMYEMLYGETPFYAESLVETYGKIMNHKERFQFP--------------------TQVTD 308
Query: 184 KRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK---YDMSKRVAIELLQKVS 240
               A  L++ ++  R      E + G N   D   HPFF    +D  +      + +VS
Sbjct: 309 VSENAKDLIRRLICSR------EHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVS 362
Query: 241 NPPTTYTDLEPDDD 254
           +P  T ++ + DDD
Sbjct: 363 SPTDT-SNFDVDDD 375

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSF-IGTPYWMAPE----VAAVERKGGYNQQCDIWA 123
           DRCG ++LADFG   ++ A    R    +GTP +++PE    V      G Y  +CD WA
Sbjct: 196 DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWA 255
Query: 124 VGITAIELAELQPPMF 139
           +G+ A E+   Q P +
Sbjct: 256 LGVFAYEMFYGQTPFY 271

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ADFG+  +      K   F GTP ++APE+   ++   YN   D W+ G+  
Sbjct: 153 DKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQK---YNHSVDWWSFGVLL 209
Query: 129 IELAELQPPM 138
            E+   Q P 
Sbjct: 210 YEMLIGQSPF 219

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 69  DRCGDVKLADFGVSAQITATINKR-KSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGI 126
           D+ G +KLADFG   ++      R  + +GTP +++PEV   +   GY  ++CD W+VG+
Sbjct: 207 DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 266
Query: 127 TAIELAELQPPMF 139
              E+     P +
Sbjct: 267 FLYEMLVGDTPFY 279

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 69  DRCGDVKLADFGVSAQITATINKR-KSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGI 126
           D+ G +KLADFG   ++      R  + +GTP +++PEV   +   GY  ++CD W+VG+
Sbjct: 202 DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 261
Query: 127 TAIELAELQPPMF 139
              E+     P +
Sbjct: 262 FLYEMLVGDTPFY 274

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP ++AP   A+    GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAP---AIILSKGYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 36  LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSF 95
           LAEL   +  LH +  ++       KP  +   D  G +KL DFG+S +      K  SF
Sbjct: 136 LAELALGLDHLHSLGIIY----RDLKPENIL-LDEEGHIKLTDFGLSKEAIDHEKKAYSF 190
Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
            GT  +MAPEV     + G++   D W+ G+   E+
Sbjct: 191 CGTVEYMAPEVV---NRQGHSHSADWWSYGVLMFEM 223

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 9/125 (7%)
Query: 68  KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT 127
           +D    + ++DFG+S ++    +   +  GTP ++APEV A   +  Y++  D W++G+ 
Sbjct: 156 QDEESKIMISDFGLS-KMEGKGDVMSTACGTPGYVAPEVLA---QKPYSKAVDCWSIGVI 211
Query: 128 AIELAELQPPMFDLHPMRAL--FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
           A  L    PP +D +  +     L ++  F  P   D    S +  +F++  + K+P KR
Sbjct: 212 AYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDD---ISDSAKDFIRNLMEKDPNKR 268
Query: 186 PTADK 190
            T ++
Sbjct: 269 YTCEQ 273

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ADFG+  +      K   F GTP ++APE+   ++   YN   D W+ G+  
Sbjct: 152 DKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQK---YNHSVDWWSFGVLL 208
Query: 129 IELAELQPPM 138
            E+   Q P 
Sbjct: 209 YEMLIGQSPF 218

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +K+ DFG S +I    +  ++  GTP ++APEV       GYN+  D W++G+       
Sbjct: 295 IKITDFGHS-KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 353
Query: 134 LQPPMFDLH----PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
             PP F  H     ++      K  F P    +    S    + VK  L  +PK R T +
Sbjct: 354 GYPP-FSEHRTQVSLKDQITSGKYNFIPEVWAEV---SEKALDLVKKLLVVDPKARFTTE 409
Query: 190 KLLQ 193
           + L+
Sbjct: 410 EALR 413

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +K+ DFG S +I    +  ++  GTP ++APEV       GYN+  D W++G+       
Sbjct: 281 IKITDFGHS-KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 339
Query: 134 LQPPMFDLH----PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
             PP F  H     ++      K  F P    +    S    + VK  L  +PK R T +
Sbjct: 340 GYPP-FSEHRTQVSLKDQITSGKYNFIPEVWAEV---SEKALDLVKKLLVVDPKARFTTE 395
Query: 190 KLLQ 193
           + L+
Sbjct: 396 EALR 399

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +     GTP  +APE+   +   GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEALAPEIILSK---GYNKAVDWWALGVLI 228
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            E+A   PP F   P++    +     + P+    D       N +++ LTK
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD-LKDLLRNLLQVDLTK 279

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 69  DRCGDVKLADFGVSAQITATINKR-KSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGI 126
           D+ G +KLADFG   ++      R  + +GTP +++PEV   +   GY  ++CD W+VG+
Sbjct: 207 DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 266
Query: 127 TAIELAELQPPMF 139
              E+     P +
Sbjct: 267 FLYEMLVGDTPFY 279

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +KL DFG + + T+  N   +   TPY++APEV   E+   Y++ CD+W++G+    L  
Sbjct: 209 LKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEK---YDKSCDMWSLGVIMYILLC 264
Query: 134 LQPPMFDLHPM 144
             PP +  H +
Sbjct: 265 GYPPFYSNHGL 275

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +KL DFG + + T+  N   +   TPY++APEV   E+   Y++ CD+W++G+    L  
Sbjct: 159 LKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEK---YDKSCDMWSLGVIMYILLC 214
Query: 134 LQPPMFDLHPM 144
             PP +  H +
Sbjct: 215 GYPPFYSNHGL 225

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +KL DFG + + T+  N   +   TPY++APEV   E+   Y++ CD+W++G+    L  
Sbjct: 203 LKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEK---YDKSCDMWSLGVIMYILLC 258
Query: 134 LQPPMFDLHPM 144
             PP +  H +
Sbjct: 259 GYPPFYSNHGL 269

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +K+ DFG S +I    +  ++  GTP ++APEV       GYN+  D W++G+       
Sbjct: 156 IKITDFGHS-KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
Query: 134 LQPPMFDLH----PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
             PP F  H     ++      K  F P    +    S    + VK  L  +PK R T +
Sbjct: 215 GYPP-FSEHRTQVSLKDQITSGKYNFIPEVWAE---VSEKALDLVKKLLVVDPKARFTTE 270
Query: 190 KLLQ 193
           + L+
Sbjct: 271 EALR 274

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +K+ DFG S +I    +  ++  GTP ++APEV       GYN+  D W++G+       
Sbjct: 155 IKITDFGHS-KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 213
Query: 134 LQPPMFDLH----PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
             PP F  H     ++      K  F P    +    S    + VK  L  +PK R T +
Sbjct: 214 GYPP-FSEHRTQVSLKDQITSGKYNFIPEVWAE---VSEKALDLVKKLLVVDPKARFTTE 269
Query: 190 KLLQ 193
           + L+
Sbjct: 270 EALR 273

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +K+ DFG S +I    +  ++  GTP ++APEV       GYN+  D W++G+       
Sbjct: 156 IKITDFGHS-KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
Query: 134 LQPPMFDLH----PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
             PP F  H     ++      K  F P    +    S    + VK  L  +PK R T +
Sbjct: 215 GYPP-FSEHRTQVSLKDQITSGKYNFIPEVWAE---VSEKALDLVKKLLVVDPKARFTTE 270
Query: 190 KLLQ 193
           + L+
Sbjct: 271 EALR 274

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +K+ DFG S +I    +  ++  GTP ++APEV       GYN+  D W++G+       
Sbjct: 162 IKITDFGHS-KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 220
Query: 134 LQPPMFDLH----PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
             PP F  H     ++      K  F P    +    S    + VK  L  +PK R T +
Sbjct: 221 GYPP-FSEHRTQVSLKDQITSGKYNFIPEVWAE---VSEKALDLVKKLLVVDPKARFTTE 276
Query: 190 KLLQ 193
           + L+
Sbjct: 277 EALR 280

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +KL DFG + + T+  N   +   TPY++APEV   E+   Y++ CD+W++G+    L  
Sbjct: 173 LKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEK---YDKSCDMWSLGVIMYILLC 228
Query: 134 LQPPMFDLHPM 144
             PP +  H +
Sbjct: 229 GYPPFYSNHGL 239

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +KL DFG + + T+  N   +   TPY++APEV   E+   Y++ CD+W++G+    L  
Sbjct: 158 LKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEK---YDKSCDMWSLGVIMYILLC 213
Query: 134 LQPPMFDLHPM 144
             PP +  H +
Sbjct: 214 GYPPFYSNHGL 224

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +KL DFG + + T+  N   +   TPY++APEV   E+   Y++ CD+W++G+    L  
Sbjct: 163 LKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEK---YDKSCDMWSLGVIMYILLC 218
Query: 134 LQPPMFDLHPM 144
             PP +  H +
Sbjct: 219 GYPPFYSNHGL 229

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +KL DFG + + T+  N   +   TPY++APEV   E+   Y++ CD+W++G+    L  
Sbjct: 165 LKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEK---YDKSCDMWSLGVIMYILLC 220
Query: 134 LQPPMFDLHPM 144
             PP +  H +
Sbjct: 221 GYPPFYSNHGL 231

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +KL DFG + + T+  N   +   TPY++APEV   E+   Y++ CD+W++G+    L  
Sbjct: 159 LKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEK---YDKSCDMWSLGVIMYILLC 214
Query: 134 LQPPMFDLHPM 144
             PP +  H +
Sbjct: 215 GYPPFYSNHGL 225

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +K+ DFG S +I    +  ++  GTP ++APEV       GYN+  D W++G+       
Sbjct: 156 IKITDFGHS-KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
Query: 134 LQPPMFDLH----PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
             PP F  H     ++      K  F P    +    S    + VK  L  +PK R T +
Sbjct: 215 GYPP-FSEHRTQVSLKDQITSGKYNFIPEVWAE---VSEKALDLVKKLLVVDPKARFTTE 270
Query: 190 KLLQ 193
           + L+
Sbjct: 271 EALR 274

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +KL DFG + + T+  N   +   TPY++APEV   E+   Y++ CD+W++G+    L  
Sbjct: 164 LKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEK---YDKSCDMWSLGVIMYILLC 219
Query: 134 LQPPMFDLHPM 144
             PP +  H +
Sbjct: 220 GYPPFYSNHGL 230

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +KL DFG + + T+  N   +   TPY++APEV   E+   Y++ CD+W++G+    L  
Sbjct: 157 LKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEK---YDKSCDMWSLGVIMYILLC 212
Query: 134 LQPPMFDLHPM 144
             PP +  H +
Sbjct: 213 GYPPFYSNHGL 223

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +KL DFG + + T+  N   +   TPY++APEV   E+   Y++ CD W++G+    L  
Sbjct: 203 LKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEK---YDKSCDXWSLGVIXYILLC 258
Query: 134 LQPPMFDLHPM 144
             PP +  H +
Sbjct: 259 GYPPFYSNHGL 269

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           ++K+ADFG S + T    K  +F G+P + APE+   ++  G   + D+W++G+    L 
Sbjct: 149 NIKIADFGFSNEFTVG-GKLDTFCGSPPYAAPELFQGKKYDG--PEVDVWSLGVILYTLV 205
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR----WSSTFHNFVKIALTKNPKKRPTA 188
               P FD   ++ L        +   L+ K R     S+   N +K  L  NP KR T 
Sbjct: 206 SGSLP-FDGQNLKEL--------RERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTL 256
Query: 189 DKLLQ 193
           +++++
Sbjct: 257 EQIMK 261

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +KL DFG + + T+  N       TPY++APEV   E+   Y++ CD+W++G+    L  
Sbjct: 157 LKLTDFGFAKETTSH-NSLTEPCYTPYYVAPEVLGPEK---YDKSCDMWSLGVIMYILLC 212
Query: 134 LQPPMFDLHPM 144
             PP +  H +
Sbjct: 213 GYPPFYSNHGL 223

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 70  RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAI 129
           R  ++K+ADFG++ Q+     K  +  GTP +++PE+A    +  +  + D+W++G    
Sbjct: 147 RNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIAT---RSAHGLESDVWSLGCMFY 203
Query: 130 ELAELQPPMFD 140
            L   +PP FD
Sbjct: 204 TLLIGRPP-FD 213

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG+  +  +     K+F GTP ++APEV        Y +  D W +G+  
Sbjct: 139 DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL---EDNDYGRAVDWWGLGVVM 195
Query: 129 IELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P +  D   +  L LM +  F P  L      S    + +   L K+PK+R
Sbjct: 196 YEMMCGRLPFYNQDHERLFELILMEEIRF-PRTL------SPEAKSLLAGLLKKDPKQR 247

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG+  +  +     K+F GTP ++APEV        Y +  D W +G+  
Sbjct: 142 DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL---EDNDYGRAVDWWGLGVVM 198
Query: 129 IELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P +  D   +  L LM +  F P  L      S    + +   L K+PK+R
Sbjct: 199 YEMMCGRLPFYNQDHERLFELILMEEIRF-PRTL------SPEAKSLLAGLLKKDPKQR 250

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 16/123 (13%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           ++K+ADFG S + T   NK  +F G P + APE+   ++  G   + D+W++G+    L 
Sbjct: 151 NIKIADFGFSNEFTFG-NKLDAFCGAPPYAAPELFQGKKYDG--PEVDVWSLGVILYTLV 207
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR----WSSTFHNFVKIALTKNPKKRPTA 188
               P FD   ++ L        +   L+ K R     S+   N +K  L  NP KR T 
Sbjct: 208 SGSLP-FDGQNLKEL--------RERVLRGKYRIPFYXSTDCENLLKKFLILNPSKRGTL 258
Query: 189 DKL 191
           +++
Sbjct: 259 EQI 261

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG+  +  +     K+F GTP ++APEV        Y +  D W +G+  
Sbjct: 139 DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL---EDNDYGRAVDWWGLGVVM 195
Query: 129 IELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P +  D   +  L LM +  F P  L      S    + +   L K+PK+R
Sbjct: 196 YEMMCGRLPFYNQDHERLFELILMEEIRF-PRTL------SPEAKSLLAGLLKKDPKQR 247

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 65/172 (37%), Gaps = 33/172 (19%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG+  +         +F GT  +MAPE+     + G+N+  D W++G    ++
Sbjct: 158 GHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILM---RSGHNRAVDWWSLGALMYDM 214
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
               PP                          +    T    +K  L   P     A  L
Sbjct: 215 LTGAPPF-----------------------TGENRKKTIDKILKCKLNLPPYLTQEARDL 251
Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPP 243
           L+ +L    R AA     G     ++ AHPFF++   +    ELL +   PP
Sbjct: 252 LKKLL---KRNAASRLGAGPGDAGEVQAHPFFRHINWE----ELLARKVEPP 296

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG+  +  +     K F GTP ++APEV        Y +  D W +G+  
Sbjct: 144 DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL---EDNDYGRAVDWWGLGVVM 200
Query: 129 IELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P +  D   +  L LM +  F P  L      S    + +   L K+PK+R
Sbjct: 201 YEMMCGRLPFYNQDHERLFELILMEEIRF-PRTL------SPEAKSLLAGLLKKDPKQR 252

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG+  +  +     K F GTP ++APEV        Y +  D W +G+  
Sbjct: 139 DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL---EDNDYGRAVDWWGLGVVM 195
Query: 129 IELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P +  D   +  L LM +  F P  L      S    + +   L K+PK+R
Sbjct: 196 YEMMCGRLPFYNQDHERLFELILMEEIRF-PRTL------SPEAKSLLAGLLKKDPKQR 247

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 74  VKLADFGVSAQIT--ATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++ + +  +  ++ +   G+  WMAPEV  ++    Y+ Q D++A GI   EL
Sbjct: 159 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYEL 218
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPAL-KDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
              Q P  +++    +  M   G   P L K +          +   L K   +RP+  +
Sbjct: 219 MTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPR 278
Query: 191 LLQVI 195
           +L  I
Sbjct: 279 ILAEI 283

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG+  +        K+F GTP ++APEV        Y +  D W +G+  
Sbjct: 286 DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL---EDNDYGRAVDWWGLGVVM 342
Query: 129 IELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P +  D   +  L LM +  F P  L  + +      + +   L K+PK+R
Sbjct: 343 YEMMCGRLPFYNQDHEKLFELILMEEIRF-PRTLGPEAK------SLLSGLLKKDPKQR 394

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 74  VKLADFGVSAQIT--ATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++ + +  +  ++ +   G+  WMAPEV  ++    Y+ Q D++A GI   EL
Sbjct: 159 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYEL 218
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPAL-KDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
              Q P  +++    +  M   G   P L K +          +   L K   +RP+  +
Sbjct: 219 MTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPR 278
Query: 191 LLQVI 195
           +L  I
Sbjct: 279 ILAEI 283

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           ++K+ADFG S + T    K  +F G P + APE+   ++  G   + D+W++G+    L 
Sbjct: 152 NIKIADFGFSNEFTVG-GKLDAFCGAPPYAAPELFQGKKYDG--PEVDVWSLGVILYTLV 208
Query: 133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR----WSSTFHNFVKIALTKNPKKRPTA 188
               P FD   ++ L        +   L+ K R     S+   N +K  L  NP KR T 
Sbjct: 209 SGSLP-FDGQNLKEL--------RERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTL 259
Query: 189 DKLLQ 193
           +++++
Sbjct: 260 EQIMK 264

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG+  +        K+F GTP ++APEV        Y +  D W +G+  
Sbjct: 283 DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL---EDNDYGRAVDWWGLGVVM 339
Query: 129 IELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P +  D   +  L LM +  F P  L  + +      + +   L K+PK+R
Sbjct: 340 YEMMCGRLPFYNQDHEKLFELILMEEIRF-PRTLGPEAK------SLLSGLLKKDPKQR 391

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG+  +  +     K F GTP ++APEV        Y +  D W +G+  
Sbjct: 139 DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL---EDNDYGRAVDWWGLGVVM 195
Query: 129 IELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P +  D   +  L LM +  F P  L      S    + +   L K+PK+R
Sbjct: 196 YEMMCGRLPFYNQDHERLFELILMEEIRF-PRTL------SPEAKSLLAGLLKKDPKQR 247

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG+  +  +     K F GTP ++APEV        Y +  D W +G+  
Sbjct: 139 DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL---EDNDYGRAVDWWGLGVVM 195
Query: 129 IELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P +  D   +  L LM +  F P  L      S    + +   L K+PK+R
Sbjct: 196 YEMMCGRLPFYNQDHERLFELILMEEIRF-PRTL------SPEAKSLLAGLLKKDPKQR 247

>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 68/192 (35%), Gaps = 72/192 (37%)
Query: 101 WMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKP--- 157
           W++PEV   +   GY+ + DI++VGITA ELA    P  D+ P   + L   +G  P   
Sbjct: 185 WLSPEVLQ-QNLQGYDAKSDIYSVGITACELANGHVPFKDM-PATQMLLEKLNGTVPCLL 242
Query: 158 ---------------------------------------PALKDKDRWSSTFHNFVKIAL 178
                                                  P+      +S  FH+FV+  L
Sbjct: 243 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCL 302
Query: 179 TKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQK 238
            +NP  RP+A  LL                           H FFK    KR A E L +
Sbjct: 303 QRNPDARPSASTLLN--------------------------HSFFK--QIKRRASEALPE 334
Query: 239 VSNPPTTYTDLE 250
           +  P T  T+ E
Sbjct: 335 LLRPVTPITNFE 346

>pdb|3GNI|B Chain B, Structure Of Strad And Mo25 Length = 389

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 68/192 (35%), Gaps = 72/192 (37%)
Query: 101 WMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKP--- 157
           W++PEV   +   GY+ + DI++VGITA ELA    P  D+ P   + L   +G  P   
Sbjct: 201 WLSPEVLQ-QNLQGYDAKSDIYSVGITACELANGHVPFKDM-PATQMLLEKLNGTVPCLL 258
Query: 158 ---------------------------------------PALKDKDRWSSTFHNFVKIAL 178
                                                  P+      +S  FH+FV+  L
Sbjct: 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCL 318
Query: 179 TKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQK 238
            +NP  RP+A  LL                           H FFK    KR A E L +
Sbjct: 319 QRNPDARPSASTLLN--------------------------HSFFK--QIKRRASEALPE 350
Query: 239 VSNPPTTYTDLE 250
           +  P T  T+ E
Sbjct: 351 LLRPVTPITNFE 362

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 74  VKLADFGVSAQITATINKR-------KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           VK+ DFG+     AT+  R       +   G+  WMAPEV  ++    Y+ Q D++A GI
Sbjct: 147 VKIGDFGL-----ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGI 201
Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL-KDKDRWSSTFHNFVKIALTKNPKKR 185
              EL   Q P  +++    +  M   G   P L K +          +   L K   +R
Sbjct: 202 VLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDER 261
Query: 186 PTADKLLQVI 195
           P+  ++L  I
Sbjct: 262 PSFPRILAEI 271

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 64/172 (37%), Gaps = 33/172 (19%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG+  +          F GT  +MAPE+     + G+N+  D W++G    ++
Sbjct: 158 GHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILM---RSGHNRAVDWWSLGALMYDM 214
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
               PP                          +    T    +K  L   P     A  L
Sbjct: 215 LTGAPPF-----------------------TGENRKKTIDKILKCKLNLPPYLTQEARDL 251
Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPP 243
           L+ +L    R AA     G     ++ AHPFF++   +    ELL +   PP
Sbjct: 252 LKKLL---KRNAASRLGAGPGDAGEVQAHPFFRHINWE----ELLARKVEPP 296

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG+  +        K F GTP ++APEV        Y +  D W +G+  
Sbjct: 143 DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL---EDNDYGRAVDWWGLGVVM 199
Query: 129 IELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P +  D   +  L LM +  F P  L  + +      + +   L K+PK+R
Sbjct: 200 YEMMCGRLPFYNQDHEKLFELILMEEIRF-PRTLGPEAK------SLLSGLLKKDPKQR 251

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  K+    VKL DFGV+ Q+  +       +GTP++MAPEV    ++  Y +  D+W  
Sbjct: 163 LASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV---KREPYGKPVDVWGC 219
Query: 125 GI 126
           G+
Sbjct: 220 GV 221

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG+  +        K F GTP ++APEV        Y +  D W +G+  
Sbjct: 145 DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL---EDNDYGRAVDWWGLGVVM 201
Query: 129 IELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P +  D   +  L LM +  F P  L  + +      + +   L K+PK+R
Sbjct: 202 YEMMCGRLPFYNQDHEKLFELILMEEIRF-PRTLGPEAK------SLLSGLLKKDPKQR 253

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG+  +        K F GTP ++APEV        Y +  D W +G+  
Sbjct: 144 DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL---EDNDYGRAVDWWGLGVVM 200
Query: 129 IELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P +  D   +  L LM +  F P  L  + +      + +   L K+PK+R
Sbjct: 201 YEMMCGRLPFYNQDHEKLFELILMEEIRF-PRTLGPEAK------SLLSGLLKKDPKQR 252

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 67/176 (38%), Gaps = 59/176 (33%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +KL D+G+  +     +   +F GTP ++APE+    R   Y    D WA+G+  
Sbjct: 187 DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL---RGEDYGFSVDWWALGVLM 243
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E+   + P FD+                                  +  + NP +  T 
Sbjct: 244 FEMMAGRSP-FDI----------------------------------VGSSDNPDQN-TE 267
Query: 189 DKLLQVILIHRARV--------AAV----------ERKGGYNQQ--CDIWAHPFFK 224
           D L QVIL  + R+        A+V          ER G + Q    DI  HPFF+
Sbjct: 268 DYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  + RC   KL DFG+  ++  T    +   G P +MAPE+     +G Y    D++++
Sbjct: 190 LGPRGRC---KLGDFGLLVEL-GTAGAGEVQEGDPRYMAPELL----QGSYGTAADVFSL 241
Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G+T +E+A       +L      +   + G+ PP        SS   + + + L  +PK 
Sbjct: 242 GLTILEVA----CNMELPHGGEGWQQLRQGYLPPEFTAG--LSSELRSVLVMMLEPDPKL 295
Query: 185 RPTADKLLQVILIHR 199
           R TA+ LL + ++ +
Sbjct: 296 RATAEALLALPVLRQ 310

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +K+ADFG+  +        K F GTP ++APE+ A +    Y +  D WA G+  
Sbjct: 476 DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP---YGKSVDWWAFGVLL 532
Query: 129 IELAELQPPM 138
            E+   Q P 
Sbjct: 533 YEMLAGQAPF 542

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +K+ADFG+  +        K F GTP ++APE+ A +    Y +  D WA G+  
Sbjct: 155 DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP---YGKSVDWWAFGVLL 211
Query: 129 IELAELQPPM 138
            E+   Q P 
Sbjct: 212 YEMLAGQAPF 221

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G V + DF ++A +     +  +  GT  +MAPE+ +  +  GY+   D W++G+TA
Sbjct: 149 DEHGHVHITDFNIAAMLPRE-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTA 207
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            EL   + P        +  ++    F+   +     WS    + +K  L  NP +R
Sbjct: 208 YELLRGRRPYHIRSSTSSKEIVHT--FETTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 31/192 (16%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSF-IGTPYWMAPEV--AAVERKGGYNQQCDIWAVG 125
           D  G ++LADFG   ++      + S  +GTP +++PE+  A  +  G Y  +CD W++G
Sbjct: 225 DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLG 284
Query: 126 ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
           +   E+   + P +      A  L+   G     +  ++R+    H      +T   ++ 
Sbjct: 285 VCMYEMLYGETPFY------AESLVETYG---KIMNHEERFQFPSH------VTDVSEE- 328
Query: 186 PTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK---YDMSKRVAIELLQKVSNP 242
             A  L+Q ++  R      ER+ G N   D   H FF+   ++  + +    +  VS+P
Sbjct: 329 --AKDLIQRLICSR------ERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSP 380
Query: 243 PTTYTDLEPDDD 254
             T ++ + DDD
Sbjct: 381 SDT-SNFDVDDD 391

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 31/192 (16%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSF-IGTPYWMAPEV--AAVERKGGYNQQCDIWAVG 125
           D  G ++LADFG   ++      + S  +GTP +++PE+  A  +  G Y  +CD W++G
Sbjct: 209 DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLG 268
Query: 126 ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
           +   E+   + P +      A  L+   G     +  ++R+    H      +T   ++ 
Sbjct: 269 VCMYEMLYGETPFY------AESLVETYG---KIMNHEERFQFPSH------VTDVSEE- 312
Query: 186 PTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK---YDMSKRVAIELLQKVSNP 242
             A  L+Q ++  R      ER+ G N   D   H FF+   ++  + +    +  VS+P
Sbjct: 313 --AKDLIQRLICSR------ERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSP 364
Query: 243 PTTYTDLEPDDD 254
             T ++ + DDD
Sbjct: 365 SDT-SNFDVDDD 375

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG +  +           GTP ++APEV + +    YN+  D W+ GI  
Sbjct: 140 DKNGHIKITDFGFAKYVPDVT---YXLCGTPDYIAPEVVSTK---PYNKSIDWWSFGILI 193
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD 164
            E+     P +D + M+    +  +  + P   ++D
Sbjct: 194 YEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNED 229

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 18/148 (12%)
Query: 45  DLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAP 104
           DL P   L+L  +   K            + + DFG+S      I    +  GTP ++AP
Sbjct: 131 DLKPENLLYLTPEENSK------------IMITDFGLSKMEQNGI--MSTACGTPGYVAP 176
Query: 105 EVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD 164
           EV A   +  Y++  D W++G+    L    PP ++      LF   K G+        D
Sbjct: 177 EVLA---QKPYSKAVDCWSIGVITYILLCGYPPFYE-ETESKLFEKIKEGYYEFESPFWD 232
Query: 165 RWSSTFHNFVKIALTKNPKKRPTADKLL 192
             S +  +F+   L K+P +R T +K L
Sbjct: 233 DISESAKDFICHLLEKDPNERYTCEKAL 260

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 66/176 (37%), Gaps = 59/176 (33%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +KL D+G+  +     +    F GTP ++APE+    R   Y    D WA+G+  
Sbjct: 140 DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL---RGEDYGFSVDWWALGVLM 196
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E+   + P FD+                                  +  + NP +  T 
Sbjct: 197 FEMMAGRSP-FDI----------------------------------VGSSDNPDQN-TE 220
Query: 189 DKLLQVILIHRARV--------AAV----------ERKGGYNQQ--CDIWAHPFFK 224
           D L QVIL  + R+        A+V          ER G + Q    DI  HPFF+
Sbjct: 221 DYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 276

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G     WMAPE     + G +    D+W+ G+   E+
Sbjct: 169 VKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL---KDGVFTTSSDMWSFGVVLWEI 225
Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
             L + P   L   + L  +   G+    L   D       + +++    NPK RPT  +
Sbjct: 226 TSLAEQPYQGLSNEQVLKFVMDGGY----LDQPDNCPERVTDLMRMCWQFNPKMRPTFLE 281
Query: 191 LLQVI 195
           ++ ++
Sbjct: 282 IVNLL 286

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G     WMAPE     + G +    D+W+ G+   E+
Sbjct: 166 VKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL---KDGVFTTSSDMWSFGVVLWEI 222
Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
             L + P   L   + L  +   G+    L   D       + +++    NPK RPT  +
Sbjct: 223 TSLAEQPYQGLSNEQVLKFVMDGGY----LDQPDNCPERVTDLMRMCWQFNPKMRPTFLE 278
Query: 191 LLQVI 195
           ++ ++
Sbjct: 279 IVNLL 283

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 66/176 (37%), Gaps = 59/176 (33%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +KL D+G+  +     +    F GTP ++APE+    R   Y    D WA+G+  
Sbjct: 144 DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL---RGEDYGFSVDWWALGVLM 200
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E+   + P FD+                                  +  + NP +  T 
Sbjct: 201 FEMMAGRSP-FDI----------------------------------VGSSDNPDQN-TE 224
Query: 189 DKLLQVILIHRARV--------AAV----------ERKGGYNQQ--CDIWAHPFFK 224
           D L QVIL  + R+        A+V          ER G + Q    DI  HPFF+
Sbjct: 225 DYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G     WMAPE     + G +    D+W+ G+   E+
Sbjct: 169 VKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESL---KDGVFTTSSDMWSFGVVLWEI 225
Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
             L + P   L   + L  +   G+    L   D       + +++    NPK RPT  +
Sbjct: 226 TSLAEQPYQGLSNEQVLKFVMDGGY----LDQPDNCPERVTDLMRMCWQFNPKMRPTFLE 281
Query: 191 LLQVI 195
           ++ ++
Sbjct: 282 IVNLL 286

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 10/123 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +K+ADFG+S  +   +   K+  GTP + APE+    R   Y  + D+W+VGI    L  
Sbjct: 190 LKIADFGLSKIVEHQV-LMKTVCGTPGYCAPEIL---RGCAYGPEVDMWSVGIITYILLC 245
Query: 134 LQPPMFDLHPMRALF---LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
              P +D    + +F   L  +  F  P     D  S    + V+  +  +PKKR T  +
Sbjct: 246 GFEPFYDERGDQFMFRRILNCEYYFISPWW---DEVSLNAKDLVRKLIVLDPKKRLTTFQ 302
Query: 191 LLQ 193
            LQ
Sbjct: 303 ALQ 305

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G + L DFG+  +     +   +F GTP ++APEV     K  Y++  D W +G   
Sbjct: 173 DSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVL---HKQPYDRTVDWWCLGAVL 229
Query: 129 IELAELQPPMF 139
            E+    PP +
Sbjct: 230 YEMLYGLPPFY 240

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G     WM+PE     + G +    D+W+ G+   E+
Sbjct: 171 VKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESL---KDGVFTTYSDVWSFGVVLWEI 227
Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           A L + P   L   + L  + + G     L   D         +++    NPK RP+  +
Sbjct: 228 ATLAEQPYQGLSNEQVLRFVMEGGL----LDKPDNCPDMLFELMRMCWQYNPKMRPSFLE 283
Query: 191 LLQVI 195
           ++  I
Sbjct: 284 IISSI 288

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/114 (22%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 75  KLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAEL 134
           K+ADFG+S Q   +++     +G   WMAPE    E +  Y ++ D ++  +    +   
Sbjct: 169 KVADFGLSQQ---SVHSVSGLLGNFQWMAPETIGAEEE-SYTEKADTYSFAMILYTILTG 224
Query: 135 QPPM--FDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
           + P   +    ++ + ++ + G +P   +D         N +++  + +PKKRP
Sbjct: 225 EGPFDEYSYGKIKFINMIREEGLRPTIPED---CPPRLRNVIELCWSGDPKKRP 275

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G     WM+PE     + G +    D+W+ G+   E+
Sbjct: 162 VKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESL---KDGVFTTYSDVWSFGVVLWEI 218
Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           A L + P   L   + L  + + G     L   D         +++    NPK RP+  +
Sbjct: 219 ATLAEQPYQGLSNEQVLRFVMEGGL----LDKPDNCPDMLLELMRMCWQYNPKMRPSFLE 274
Query: 191 LLQVI 195
           ++  I
Sbjct: 275 IISSI 279

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VK+ D G++    A+  K  + IGTP + APE    E K  Y++  D++A G   +E 
Sbjct: 169 GSVKIGDLGLATLKRASFAK--AVIGTPEFXAPE--XYEEK--YDESVDVYAFGXCXLEX 222
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPAL 160
           A  + P  +      ++    SG KP + 
Sbjct: 223 ATSEYPYSECQNAAQIYRRVTSGVKPASF 251

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 28/162 (17%)
Query: 72  GDVKLADFGV------------SAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQC 119
           G +KL DFG             SAQ  A + +  +   TP +  PE+  +       ++ 
Sbjct: 175 GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ 234
Query: 120 DIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALT 179
           DIWA+G     L   Q P  D   +R   +++     PP     D   + FH+ ++  L 
Sbjct: 235 DIWALGCILYLLCFRQHPFEDGAKLR---IVNGKYSIPP----HDTQYTVFHSLIRAMLQ 287
Query: 180 KNPKKRPT-ADKLLQVILIHRAR--------VAAVERKGGYN 212
            NP++R + A+ + Q+  I  AR           +E+ GGY 
Sbjct: 288 VNPEERLSIAEVVHQLQEIAAARNVNPKSPITELLEQNGGYG 329

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G     WM+PE     + G +    D+W+ G+   E+
Sbjct: 177 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL---KDGVFTTYSDVWSFGVVLWEI 233
Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           A L + P   L   + L  + + G     L   D         +++    NPK RP+  +
Sbjct: 234 ATLAEQPYQGLSNEQVLRFVMEGGL----LDKPDNCPDMLFELMRMCWQYNPKMRPSFLE 289
Query: 191 LLQVI 195
           ++  I
Sbjct: 290 IISSI 294

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G     WM+PE     + G +    D+W+ G+   E+
Sbjct: 177 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL---KDGVFTTYSDVWSFGVVLWEI 233
Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           A L + P   L   + L  + + G     L   D         +++    NPK RP+  +
Sbjct: 234 ATLAEQPYQGLSNEQVLRFVMEGGL----LDKPDNCPDMLFELMRMCWQYNPKMRPSFLE 289
Query: 191 LLQVI 195
           ++  I
Sbjct: 290 IISSI 294

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G     WM+PE     + G +    D+W+ G+   E+
Sbjct: 170 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL---KDGVFTTYSDVWSFGVVLWEI 226
Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           A L + P   L   + L  + + G     L   D         +++    NPK RP+  +
Sbjct: 227 ATLAEQPYQGLSNEQVLRFVMEGGL----LDKPDNCPDMLFELMRMCWQYNPKMRPSFLE 282
Query: 191 LLQVI 195
           ++  I
Sbjct: 283 IISSI 287

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G     WM+PE     + G +    D+W+ G+   E+
Sbjct: 164 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL---KDGVFTTYSDVWSFGVVLWEI 220
Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           A L + P   L   + L  + + G     L   D         +++    NPK RP+  +
Sbjct: 221 ATLAEQPYQGLSNEQVLRFVMEGGL----LDKPDNCPDMLFELMRMCWQYNPKMRPSFLE 276
Query: 191 LLQVI 195
           ++  I
Sbjct: 277 IISSI 281

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/114 (22%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 75  KLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAEL 134
           K+ADFG S Q   +++     +G   WMAPE    E +  Y ++ D ++  +    +   
Sbjct: 169 KVADFGTSQQ---SVHSVSGLLGNFQWMAPETIGAEEE-SYTEKADTYSFAMILYTILTG 224
Query: 135 QPPM--FDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
           + P   +    ++ + ++ + G +P   +D         N +++  + +PKKRP
Sbjct: 225 EGPFDEYSYGKIKFINMIREEGLRPTIPED---CPPRLRNVIELCWSGDPKKRP 275

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G     WM+PE     + G +    D+W+ G+   E+
Sbjct: 171 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL---KDGVFTTYSDVWSFGVVLWEI 227
Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           A L + P   L   + L  + + G     L   D         +++    NPK RP+  +
Sbjct: 228 ATLAEQPYQGLSNEQVLRFVMEGGL----LDKPDNCPDMLFELMRMCWQYNPKMRPSFLE 283
Query: 191 LLQVI 195
           ++  I
Sbjct: 284 IISSI 288

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 86/229 (37%), Gaps = 74/229 (32%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +KL D+G+  +     +    F GTP ++APE+    R   Y    D WA+G+  
Sbjct: 155 DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL---RGEDYGFSVDWWALGVLM 211
Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E+   + P FD+                                  +  + NP +  T 
Sbjct: 212 FEMMAGRSP-FDI----------------------------------VGSSDNPDQN-TE 235
Query: 189 DKLLQVILIHRARV--------AAV----------ERKGGYNQQ--CDIWAHPFFK---Y 225
           D L QVIL  + R+        A+V          ER G   Q    DI  HPFF+   +
Sbjct: 236 DYLFQVILEKQIRIPRSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDW 295
Query: 226 DM--SKRVAIELLQKVS------NPPTTYTD----LEPDDDGEIPNVPQ 262
           DM   K+V       +S      N  + +T+    L PDDD  +  + Q
Sbjct: 296 DMMEQKQVVPPFKPNISGEFGLDNFDSQFTNERVQLXPDDDDIVRKIDQ 344

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G     WM+PE     + G +    D+W+ G+   E+
Sbjct: 170 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL---KDGVFTTYSDVWSFGVVLWEI 226
Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           A L + P   L   + L  + + G     L   D         +++    NPK RP+  +
Sbjct: 227 ATLAEQPYQGLSNEQVLRFVMEGGL----LDKPDNCPDMLFELMRMCWQYNPKMRPSFLE 282
Query: 191 LLQVI 195
           ++  I
Sbjct: 283 IISSI 287

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G     WM+PE     + G +    D+W+ G+   E+
Sbjct: 168 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL---KDGVFTTYSDVWSFGVVLWEI 224
Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           A L + P   L   + L  + + G     L   D         +++    NPK RP+  +
Sbjct: 225 ATLAEQPYQGLSNEQVLRFVMEGGL----LDKPDNCPDMLFELMRMCWQYNPKMRPSFLE 280
Query: 191 LLQVI 195
           ++  I
Sbjct: 281 IISSI 285

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G     WM+PE     + G +    D+W+ G+   E+
Sbjct: 167 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL---KDGVFTTYSDVWSFGVVLWEI 223
Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           A L + P   L   + L  + + G     L   D         +++    NPK RP+  +
Sbjct: 224 ATLAEQPYQGLSNEQVLRFVMEGGL----LDKPDNCPDMLFELMRMCWQYNPKMRPSFLE 279
Query: 191 LLQVI 195
           ++  I
Sbjct: 280 IISSI 284

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G     WM+PE     + G +    D+W+ G+   E+
Sbjct: 199 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL---KDGVFTTYSDVWSFGVVLWEI 255
Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           A L + P   L   + L  + + G     L   D         +++    NPK RP+  +
Sbjct: 256 ATLAEQPYQGLSNEQVLRFVMEGGL----LDKPDNCPDMLFELMRMCWQYNPKMRPSFLE 311
Query: 191 LLQVI 195
           ++  I
Sbjct: 312 IISSI 316

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  K+    VKL  FGV+ Q+  +       +GTP++MAPEV    ++  Y +  D+W  
Sbjct: 165 LASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV---KREPYGKPVDVWGC 221
Query: 125 GITAIELAELQPPMF 139
           G+    L     P +
Sbjct: 222 GVILFILLSGCLPFY 236

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 13/134 (9%)
Query: 45  DLHPMRALFLMS--KSGFKPPALKDKDRCG--DVKLADFGVSAQITATINKRKSFIGTPY 100
           DL P   LF+ S     + P   +D+      D+K+ DFG +   T       + + T +
Sbjct: 143 DLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA---TYDDEHHSTLVSTRH 199
Query: 101 WMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS--GFKPP 158
           + APEV       G++Q CD+W++G   IE   L   +F  H  +    M +   G  P 
Sbjct: 200 YRAPEVILA---LGWSQPCDVWSIGCILIEYY-LGFTVFPTHDSKEHLAMMERILGPLPK 255
Query: 159 ALKDKDRWSSTFHN 172
            +  K R    FH+
Sbjct: 256 HMIQKTRKRKYFHH 269

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  K+    VKL  FGV+ Q+  +       +GTP++MAPEV    ++  Y +  D+W  
Sbjct: 163 LASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV---KREPYGKPVDVWGC 219
Query: 125 GITAIELAELQPPMF 139
           G+    L     P +
Sbjct: 220 GVILFILLSGCLPFY 234

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 60  FKPPALKDKDRCGD---VKLADFGVSAQITATINKRKSFIGTPYWMAPEVA-AVERKGGY 115
            KP  +   D  G+   +++ DFG + Q+ A        + TP + A  VA  V ++ GY
Sbjct: 147 LKPSNILYVDESGNPECLRICDFGFAKQLRA----ENGLLMTPCYTANFVAPEVLKRQGY 202
Query: 116 NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRW---SSTFHN 172
           ++ CDIW++GI    +     P  +        ++++ G     L   + W   S T  +
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGN-WNTVSETAKD 261
Query: 173 FVKIALTKNPKKRPTADKLLQ 193
            V   L  +P +R TA ++LQ
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQ 282

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 60  FKPPALKDKDRCGD---VKLADFGVSAQITATINKRKSFIGTPYWMAPEVA-AVERKGGY 115
            KP  +   D  G+   +++ DFG + Q+ A        + TP + A  VA  V ++ GY
Sbjct: 147 LKPSNILYVDESGNPECLRICDFGFAKQLRA----ENGLLMTPCYTANFVAPEVLKRQGY 202
Query: 116 NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRW---SSTFHN 172
           ++ CDIW++GI    +     P  +        ++++ G     L   + W   S T  +
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGN-WNTVSETAKD 261
Query: 173 FVKIALTKNPKKRPTADKLLQ 193
            V   L  +P +R TA ++LQ
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQ 282

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 74  VKLADFGVSAQITATINKRKSF-------IGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           VK+ DFG+     AT+  R S         G+  WMAPEV  ++    ++ Q D+++ GI
Sbjct: 171 VKIGDFGL-----ATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGI 225
Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL 160
              EL   + P   ++    +  M   G+  P L
Sbjct: 226 VLYELMTGELPYSHINNRDQIIFMVGRGYASPDL 259

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G     WMAPE     + G +    D+W+ G+   E+
Sbjct: 169 VKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL---KDGVFTTSSDMWSFGVVLWEI 225
Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
             L + P   L   + L  +   G+    L   D       + +++    NP  RPT  +
Sbjct: 226 TSLAEQPYQGLSNEQVLKFVMDGGY----LDQPDNCPERVTDLMRMCWQFNPNMRPTFLE 281
Query: 191 LLQVI 195
           ++ ++
Sbjct: 282 IVNLL 286

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 26/144 (18%)
Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYN-QQCDIWAVGIT 127
           D+ G VKL+DFG S  +     K K   GT  +M PE  + E    YN  + DIW++GI 
Sbjct: 186 DKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNE--SSYNGAKVDIWSLGIC 241
Query: 128 -------------AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFH--- 171
                         I L EL     ++      + + ++ F  P    K   S+ F    
Sbjct: 242 LYVMFYNVVPFSLKISLVEL---FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNE 298
Query: 172 --NFVKIALTKNPKKRPTADKLLQ 193
             +F+K+ L KNP +R T++  L+
Sbjct: 299 DIDFLKLFLRKNPAERITSEDALK 322

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I  T   RK   G     WM+PE     + G +    D+W+ G+   E+
Sbjct: 164 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL---KDGVFTTYSDVWSFGVVLWEI 220
Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           A L + P   L   + L  + + G     L   D         +++    NPK RP+  +
Sbjct: 221 ATLAEQPYQGLSNEQVLRFVMEGGL----LDKPDNCPDMLLELMRMCWQYNPKMRPSFLE 276
Query: 191 LLQVI 195
           ++  I
Sbjct: 277 IISSI 281

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 69  DRCGDVKLADFGVSAQITATINKRK-SFIGTPYWMAPEVAAVERKG--GYNQQCDIWAVG 125
           D  G V L DFG+S +  A   +R   F GT  +MAP++    R G  G+++  D W++G
Sbjct: 193 DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV---RGGDSGHDKAVDWWSLG 249
Query: 126 ITAIELAELQPPMFDLHPMRALFLMSKSGFK--PPALKDKDRWSSTFHNFVKIALTKNPK 183
           +   EL     P        +   +S+   K  PP  ++    S+   + ++  L K+PK
Sbjct: 250 VLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE---MSALAKDLIQRLLMKDPK 306
Query: 184 KR 185
           KR
Sbjct: 307 KR 308

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 16/132 (12%)
Query: 67  DKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           D+D    + +AD   S Q    +         P W+APE    + +    +  D+W+  +
Sbjct: 147 DEDMTARISMADVKFSFQSPGRMY-------APAWVAPEALQKKPEDTNRRSADMWSFAV 199
Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFK---PPALKDKDRWSSTFHNFVKIALTKNPK 183
              EL   + P  DL  M     ++  G +   PP +      S      +KI + ++P 
Sbjct: 200 LLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGI------SPHVSKLMKICMNEDPA 253
Query: 184 KRPTADKLLQVI 195
           KRP  D ++ ++
Sbjct: 254 KRPKFDMIVPIL 265

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
           ++K+ADFG S + T   NK  +F G+P + APE+   ++  G   + D+W++G+    L 
Sbjct: 152 NIKIADFGFSNEFTVG-NKLDTFCGSPPYAAPELFQGKKYDG--PEVDVWSLGVILYTLV 208
Query: 133 ELQPPMFDLHPMRAL 147
               P FD   ++ L
Sbjct: 209 SGSLP-FDGQNLKEL 222

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           +K+ADFG++  I      +K+  G     WMAPE A  +R   Y  Q D+W+ G+   E+
Sbjct: 189 MKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPE-ALFDRI--YTHQSDVWSFGVLLWEI 245
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
             L    +   P+  LF + K G +   +      ++  +  ++      P +RPT  +L
Sbjct: 246 FTLGGSPYPGVPVEELFKLLKEGHR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 302
Query: 192 LQ 193
           ++
Sbjct: 303 VE 304

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 71  CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIE 130
            G++K+ADFG S  + A  ++R +  GT  ++ PE+  +E +  ++++ D+W++G+   E
Sbjct: 170 AGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM--IEGRM-HDEKVDLWSLGVLCYE 224
Query: 131 LAELQPPMFDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
               +PP F+ +  +  +  +S+  F  P     D  +    + +   L  NP +RP   
Sbjct: 225 FLVGKPP-FEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQRPMLR 278
Query: 190 KLLQ 193
           ++L+
Sbjct: 279 EVLE 282

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G++K+ADFG S  + A  ++R +  GT  ++ PE+  +E +  ++++ D+W++G+   E 
Sbjct: 145 GELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM--IEGRM-HDEKVDLWSLGVLCYEF 199
Query: 132 AELQPPMFDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
              +PP F+ +  +  +  +S+  F  P     D  +    + +   L  NP +RP   +
Sbjct: 200 LVGKPP-FEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQRPMLRE 253
Query: 191 LLQ 193
           +L+
Sbjct: 254 VLE 256

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 71  CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIE 130
            G++K+ADFG S  + A  ++R +  GT  ++ PE+  +E +  ++++ D+W++G+   E
Sbjct: 141 AGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM--IEGRM-HDEKVDLWSLGVLCYE 195
Query: 131 LAELQPPMFDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
               +PP F+ +  +  +  +S+  F  P     D  +    + +   L  NP +RP   
Sbjct: 196 FLVGKPP-FEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQRPMLR 249
Query: 190 KLLQ 193
           ++L+
Sbjct: 250 EVLE 253

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G++K+ADFG S  + A  ++R +  GT  ++ PE+  +E +  ++++ D+W++G+   E 
Sbjct: 150 GELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM--IEGRM-HDEKVDLWSLGVLCYEF 204
Query: 132 AELQPPMFDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
              +PP F+ +  +  +  +S+  F  P     D  +    + +   L  NP +RP   +
Sbjct: 205 LVGKPP-FEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQRPMLRE 258
Query: 191 LLQ 193
           +L+
Sbjct: 259 VLE 261

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           +K+ADFG++  I      +K+  G     WMAPE A  +R   Y  Q D+W+ G+   E+
Sbjct: 196 MKIADFGLARDINNIDXXKKTTNGRLPVKWMAPE-ALFDRV--YTHQSDVWSFGVLMWEI 252
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
             L    +   P+  LF + K G +   +      ++  +  ++      P +RPT  +L
Sbjct: 253 FTLGGSPYPGIPVEELFKLLKEGHR---MDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 192 LQ 193
           ++
Sbjct: 310 VE 311

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G++K+ADFG S  + A  ++R +  GT  ++ PE+  +E +  ++++ D+W++G+   E 
Sbjct: 148 GELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM--IEGRM-HDEKVDLWSLGVLCYEF 202
Query: 132 AELQPPMFDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
              +PP F+ +  +  +  +S+  F  P     D  +    + +   L  NP +RP   +
Sbjct: 203 LVGKPP-FEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQRPMLRE 256
Query: 191 LLQ 193
           +L+
Sbjct: 257 VLE 259

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           +K+ADFG++  I      +K+  G     WMAPE A  +R   Y  Q D+W+ G+   E+
Sbjct: 196 MKIADFGLARDINNIDXXKKTTNGRLPVKWMAPE-ALFDRV--YTHQSDVWSFGVLMWEI 252
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
             L    +   P+  LF + K G +   +      ++  +  ++      P +RPT  +L
Sbjct: 253 FTLGGSPYPGIPVEELFKLLKEGHR---MDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 192 LQ 193
           ++
Sbjct: 310 VE 311

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 71  CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIE 130
            G++K+ADFG S  + A  ++R +  GT  ++ PE+  +E +  ++++ D+W++G+   E
Sbjct: 143 AGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM--IEGRM-HDEKVDLWSLGVLCYE 197
Query: 131 LAELQPPMFDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
               +PP F+ +  +  +  +S+  F  P     D  +    + +   L  NP +RP   
Sbjct: 198 FLVGKPP-FEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQRPMLR 251
Query: 190 KLLQ 193
           ++L+
Sbjct: 252 EVLE 255

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 71  CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIE 130
            G++K+ADFG S  + A  ++R +  GT  ++ PE+  +E +  ++++ D+W++G+   E
Sbjct: 148 AGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM--IEGRM-HDEKVDLWSLGVLCYE 202
Query: 131 LAELQPPMFDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
               +PP F+ +  +  +  +S+  F  P     D  +    + +   L  NP +RP   
Sbjct: 203 FLVGKPP-FEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQRPMLR 256
Query: 190 KLLQ 193
           ++L+
Sbjct: 257 EVLE 260

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 71  CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIE 130
            G++K+ADFG S  + A  ++R +  GT  ++ PE+  +E +  ++++ D+W++G+   E
Sbjct: 161 AGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM--IEGRM-HDEKVDLWSLGVLCYE 215
Query: 131 LAELQPPMFDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
               +PP F+ +  +  +  +S+  F  P     D  +    + +   L  NP +RP   
Sbjct: 216 FLVGKPP-FEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQRPMLR 269
Query: 190 KLLQ 193
           ++L+
Sbjct: 270 EVLE 273

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G++K+ADFG S  + A  ++R +  GT  ++ PE+  +E +  ++++ D+W++G+   E 
Sbjct: 150 GELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM--IEGRM-HDEKVDLWSLGVLCYEF 204
Query: 132 AELQPPMFDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
              +PP F+ +  +  +  +S+  F  P     D  +    + +   L  NP +RP   +
Sbjct: 205 LVGKPP-FEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQRPMLRE 258
Query: 191 LLQ 193
           +L+
Sbjct: 259 VLE 261

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 71  CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIE 130
            G++K+ADFG S  + A  ++R +  GT  ++ PE+  +E +  ++++ D+W++G+   E
Sbjct: 147 AGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM--IEGRM-HDEKVDLWSLGVLCYE 201
Query: 131 LAELQPPMFDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
               +PP F+ +  +  +  +S+  F  P     D  +    + +   L  NP +RP   
Sbjct: 202 FLVGKPP-FEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQRPMLR 255
Query: 190 KLLQ 193
           ++L+
Sbjct: 256 EVLE 259

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 64/123 (52%), Gaps = 12/123 (9%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G++K+ADFG S  + A  ++R +  GT  ++ PE   +E +  ++++ D+W++G+   E 
Sbjct: 150 GELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE--XIEGRX-HDEKVDLWSLGVLCYEF 204
Query: 132 AELQPPMFDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
              +PP F+ +  +  +  +S+  F  P     D  +    + +   L  NP +RP   +
Sbjct: 205 LVGKPP-FEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQRPXLRE 258
Query: 191 LLQ 193
           +L+
Sbjct: 259 VLE 261

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G++K+ADFG S  + A  ++R +  GT  ++ PE+  +E +  ++++ D+W++G+   E 
Sbjct: 146 GELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEM--IEGRM-HDEKVDLWSLGVLCYEF 200
Query: 132 AELQPPMFDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
              +PP F+ +  +  +  +S+  F  P     D  +    + +   L  NP +RP   +
Sbjct: 201 LVGKPP-FEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQRPMLRE 254
Query: 191 LLQ 193
           +L+
Sbjct: 255 VLE 257

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G++K+ADFG S  + A  ++R +  GT  ++ PE+  +E +  ++++ D+W++G+   E 
Sbjct: 148 GELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM--IEGRM-HDEKVDLWSLGVLCYEF 202
Query: 132 AELQPPMFDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
              +PP F+ +  +  +  +S+  F  P     D  +    + +   L  NP +RP   +
Sbjct: 203 LVGKPP-FEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQRPMLRE 256
Query: 191 LLQ 193
           +L+
Sbjct: 257 VLE 259

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           +K+ADFG++  I      +K+  G     WMAPE A  +R   Y  Q D+W+ G+   E+
Sbjct: 230 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE-ALFDRI--YTHQSDVWSFGVLLWEI 286
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
             L    +   P+  LF + K G +   +      ++  +  ++      P +RPT  +L
Sbjct: 287 FTLGGSPYPGVPVEELFKLLKEGHR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 343
Query: 192 LQ 193
           ++
Sbjct: 344 VE 345

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 71  CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIE 130
            G++K+ADFG S  + A  ++R +  GT  ++ PE+  +E +  ++++ D+W++G+   E
Sbjct: 144 AGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM--IEGRM-HDEKVDLWSLGVLCYE 198
Query: 131 LAELQPPMFDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
               +PP F+ +  +  +  +S+  F  P     D  +    + +   L  NP +RP   
Sbjct: 199 FLVGKPP-FEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQRPMLR 252
Query: 190 KLLQ 193
           ++L+
Sbjct: 253 EVLE 256

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           +K+ADFG++  I      +K+  G     WMAPE A  +R   Y  Q D+W+ G+   E+
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE-ALFDRI--YTHQSDVWSFGVLLWEI 245
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
             L    +   P+  LF + K G +   +      ++  +  ++      P +RPT  +L
Sbjct: 246 FTLGGSPYPGVPVEELFKLLKEGHR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 302
Query: 192 LQ 193
           ++
Sbjct: 303 VE 304

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 64/123 (52%), Gaps = 12/123 (9%)
Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G++K+ADFG S  + A  ++R    GT  ++ PE+  +E +  ++++ D+W++G+   E 
Sbjct: 145 GELKIADFGWS--VHAPSSRRTELCGTLDYLPPEM--IEGRM-HDEKVDLWSLGVLCYEF 199
Query: 132 AELQPPMFDLHPMRALF-LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
              +PP F+ +  +  +  +S+  F  P     D  +    + +   L  NP +RP   +
Sbjct: 200 LVGKPP-FEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQRPMLRE 253
Query: 191 LLQ 193
           +L+
Sbjct: 254 VLE 256

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 74  VKLADFGVSAQITATINKRKSFIGT--PYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           +K+ADFG++  I      +K+  G     WMAPE A  +R   Y  Q D+W+ G+   E+
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE-ALFDRI--YTHQSDVWSFGVLLWEI 245
Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
             L    +   P+  LF + K G +   +      ++  +  ++      P +RPT  +L
Sbjct: 246 FTLGGSPYPGVPVEELFKLLKEGHR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 302
Query: 192 LQ 193
           ++
Sbjct: 303 VE 304

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	302
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-73
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-23
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-72
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-22
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	5e-70
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	4e-22
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	7e-69
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-24
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-68
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-21
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-68
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-21
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-68
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-22
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	7e-63
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	5e-20
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	7e-55
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-52
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-12
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-51
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-11
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-47
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-10
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-46
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	8e-12
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-45
3an0_A	340	Dual specificity mitogen-activated protein kinase;	8e-10
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-42
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	5e-09
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-41
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-12
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	6e-39
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-05
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	6e-38
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-37
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-07
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	9e-36
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-07
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-34
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	7e-06
2a19_B	284	Interferon-induced, double-stranded RNA-activated	7e-33
2a19_B	284	Interferon-induced, double-stranded RNA-activated	8e-05
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-30
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-04
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-30
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-04
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-30
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	4e-04
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	8e-27
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	7e-26
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	9e-26
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-23
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	5e-23
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-22
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-19
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-17
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-17
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-17
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-17
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-17
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	6e-17
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	6e-17
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	7e-17
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	9e-17
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-16
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-16
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-16
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-16
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-16
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-16
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-16
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-16
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-16
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-16
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-16
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	4e-16
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	6e-16
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	9e-16
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-15
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-15
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-15
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-15
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-15
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	5e-15
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	5e-15
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	8e-15
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-14
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-14
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-14
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-14
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-14
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-14
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-14
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-14
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-14
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	5e-14
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	7e-14
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	7e-14
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-13
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-13
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-13
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-13
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-13
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	3e-13
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-13
3bhy_A	283	Death-associated protein kinase 3; death associate	4e-13
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-13
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	6e-13
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	6e-13
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-12
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-12
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-12
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-12
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-12
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-12
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	4e-12
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	5e-12
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	6e-12
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	6e-12
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-11
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-11
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-11
3soc_A	322	Activin receptor type-2A; structural genomics cons	5e-11
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	7e-11
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	8e-11
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-10
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-10
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-10
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-10
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-10
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-10
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	4e-10
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-10
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	5e-10
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	9e-10
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-09
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-09
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	5e-09
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	7e-09
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-08
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-08
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-08
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-08
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	4e-08
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	5e-08
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	9e-08
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	9e-08
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-07
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-07
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-07
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-07
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	9e-07
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-06
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	4e-06
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-05
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-05
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-05
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-05
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-05
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	4e-05
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	5e-05
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-04
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	1e-04
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-04
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-04
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-04
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-04
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-04
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	5e-04
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	7e-04

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  227 bits (580), Expect = 2e-73
 Identities = 68/184 (36%), Positives = 101/184 (54%), Gaps = 31/184 (16%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G  KLADFGV+ Q+T T+ KR + IGTP+WMAPEV    ++ GYN   DIW++GITAIE+
Sbjct: 162 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI---QEIGYNCVADIWSLGITAIEM 218

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AE +PP  D+HPMRA+F++  +   PP  +  + WS  F +FVK  L K+P++R TA +L
Sbjct: 219 AEGKPPYADIHPMRAIFMIPTNP--PPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQL 276

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEP 251
           LQ                          HPF +      +  +L+ +  +      + + 
Sbjct: 277 LQ--------------------------HPFVRSAKGVSILRDLINEAMDVKLKRQESQQ 310

Query: 252 DDDG 255
            ++G
Sbjct: 311 REEG 314

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 95.9 bits (239), Expect = 4e-23
 Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 2/57 (3%)

Query: 14  VERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR 70
           V ++ GYN   DIW++GITAIE+AE +PP  D+HPMRA+F++  +   PP  +  + 
Sbjct: 196 VIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNP--PPTFRKPEL 250

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  224 bits (573), Expect = 2e-72
 Identities = 71/169 (42%), Positives = 98/169 (57%), Gaps = 30/169 (17%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAI 129
           GD++LADFGVSA+   T+ KR SFIGTPYWMAPEV   E  +   Y+ + DIW++GIT I
Sbjct: 154 GDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLI 213

Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           E+A+++PP  +L+PMR L  ++KS   PP L    +WS  F +F+KIAL KNP+ RP+A 
Sbjct: 214 EMAQIEPPHHELNPMRVLLKIAKSD--PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAA 271

Query: 190 KLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQK 238
           +LL+                          HPF     S +   EL+ +
Sbjct: 272 QLLE--------------------------HPFVSSITSNKALRELVAE 294

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 93.5 bits (233), Expect = 2e-22
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)

Query: 16  RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR 70
           +   Y+ + DIW++GIT IE+A+++PP  +L+PMR L  ++KS   PP L    +
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD--PPTLLTPSK 247

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  219 bits (559), Expect = 5e-70
 Identities = 66/169 (39%), Positives = 95/169 (56%), Gaps = 31/169 (18%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVER--KGGYNQQCDIWAVGITAI 129
            +VKL DFGVSAQ+  T+ +R +FIGTPYWMAPEV A +      Y+ + D+W++GITAI
Sbjct: 166 AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAI 225

Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           E+AE  PP+ D+HPMRALFL+ ++    P LK K  WS  F +F++  L KN  +RP  +
Sbjct: 226 EMAEGAPPLCDMHPMRALFLIPRNP--APRLKSKK-WSKKFQSFIESCLVKNHSQRPATE 282

Query: 190 KLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQK 238
           +L++                          HPF +   ++R     L+ 
Sbjct: 283 QLMK--------------------------HPFIRDQPNERQVRIQLKD 305

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 93.6 bits (233), Expect = 4e-22
 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 2/55 (3%)

Query: 15  ERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD 69
                Y+ + D+W++GITAIE+AE  PP+ D+HPMRALFL+ ++    P LK K 
Sbjct: 206 NPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP--APRLKSKK 258

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  216 bits (553), Expect = 7e-69
 Identities = 59/170 (34%), Positives = 90/170 (52%), Gaps = 33/170 (19%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG ++ +        SF+GTPYWMAPEV     +G Y+ + D+W++GIT IEL
Sbjct: 191 GLVKLGDFGSASIMA----PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           AE +PP+F+++ M AL+ ++++    PAL+    WS  F NFV   L K P+ RPT++ L
Sbjct: 247 AERKPPLFNMNAMSALYHIAQNE--SPALQSGH-WSEYFRNFVDSCLQKIPQDRPTSEVL 303

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSN 241
           L+                          H F   +    V ++L+Q+  +
Sbjct: 304 LK--------------------------HRFVLRERPPTVIMDLIQRTKD 327

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 99.0 bits (247), Expect = 5e-24
 Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 2/59 (3%)

Query: 11  VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD 69
           V     +G Y+ + D+W++GIT IELAE +PP+F+++ M AL+ ++++    PAL+   
Sbjct: 221 VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE--SPALQSGH 277

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  214 bits (548), Expect = 1e-68
 Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 31/167 (18%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL DFG  AQIT   +KR + +GTPYWMAPEV     +  Y  + DIW++GI AIE+
Sbjct: 153 GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV---TRKAYGPKVDIWSLGIMAIEM 209

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            E +PP  + +P+RAL+L++ +G   P L++ ++ S+ F +F+   L  + +KR +A +L
Sbjct: 210 IEGEPPYLNENPLRALYLIATNG--TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKEL 267

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQK 238
           LQ                          H F K          L+  
Sbjct: 268 LQ--------------------------HQFLKIAKPLSSLTPLIAA 288

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 90.4 bits (225), Expect = 3e-21
 Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 2/57 (3%)

Query: 14  VERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR 70
           V  +  Y  + DIW++GI AIE+ E +PP  + +P+RAL+L++ +G   P L++ ++
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG--TPELQNPEK 241

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  215 bits (549), Expect = 1e-68
 Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 31/167 (18%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL+DFG  AQI+  + KRKS +GTPYWMAPEV     +  Y  + DIW++GI  IE+
Sbjct: 178 GRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVI---SRSLYATEVDIWSLGIMVIEM 234

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
            + +PP F   P++A+  +  S   PP LK+  + S    +F++  L ++P++R TA +L
Sbjct: 235 VDGEPPYFSDSPVQAMKRLRDSP--PPKLKNSHKVSPVLRDFLERMLVRDPQERATAQEL 292

Query: 192 LQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQK 238
           L                           HPF          + L+Q 
Sbjct: 293 LD--------------------------HPFLLQTGLPECLVPLIQL 313

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 90.9 bits (226), Expect = 3e-21
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)

Query: 14  VERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR 70
           V  +  Y  + DIW++GI  IE+ + +PP F   P++A+  +  S   PP LK+  +
Sbjct: 212 VISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP--PPKLKNSHK 266

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  214 bits (546), Expect = 2e-68
 Identities = 61/122 (50%), Positives = 83/122 (68%), Gaps = 7/122 (5%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G+VKLADFGV+ Q+T T  KR +F+GTP+WMAPEV    ++  Y+ + DIW++GITAIEL
Sbjct: 156 GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI---KQSAYDSKADIWSLGITAIEL 212

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           A  +PP  +LHPM+ LFL+ K+   PP L+    +S     FV+  L K P  RPTA +L
Sbjct: 213 ARGEPPHSELHPMKVLFLIPKN--NPPTLEGN--YSKPLKEFVEACLNKEPSFRPTAKEL 268

Query: 192 LQ 193
           L+
Sbjct: 269 LK 270

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 94.3 bits (235), Expect = 1e-22
 Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 2/55 (3%)

Query: 14  VERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDK 68
           V ++  Y+ + DIW++GITAIELA  +PP  +LHPM+ LFL+ K+   PP L+  
Sbjct: 190 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN--NPPTLEGN 242

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  199 bits (509), Expect = 7e-63
 Identities = 54/134 (40%), Positives = 79/134 (58%), Gaps = 16/134 (11%)

Query: 72  GDVKLADFGVSAQITATIN-----KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           G V++ADFGVSA +    +      RK+F+GTP WMAPEV  +E+  GY+ + DIW+ GI
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV--MEQVRGYDFKADIWSFGI 215

Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-------KDRWSSTFHNFVKIALT 179
           TAIELA    P     PM+ L L  ++   PP+L+          ++  +F   + + L 
Sbjct: 216 TAIELATGAAPYHKYPPMKVLMLTLQND--PPSLETGVQDKEMLKKYGKSFRKMISLCLQ 273

Query: 180 KNPKKRPTADKLLQ 193
           K+P+KRPTA +LL+
Sbjct: 274 KDPEKRPTAAELLR 287

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 87.4 bits (217), Expect = 5e-20
 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 14  VERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGD 73
           +E+  GY+ + DIW+ GITAIELA    P     PM+ L L  ++   PP+L+   +  +
Sbjct: 198 MEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND--PPSLETGVQDKE 255

Query: 74  VK 75
           + 
Sbjct: 256 ML 257

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  182 bits (462), Expect = 7e-55
 Identities = 51/245 (20%), Positives = 80/245 (32%), Gaps = 81/245 (33%)

Query: 72  GDVKLADFGVSAQITATINKRKS-------FIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           G V L+    +  + +   +++         +    W++PEV   +   GY+ + DI++V
Sbjct: 165 GKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQ-QNLQGYDAKSDIYSV 223

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---------------------- 162
           GITA ELA    P  D+   + L          P L D                      
Sbjct: 224 GITACELANGHVPFKDMPATQMLLEKLNGT--VPCLLDTSTIPAEELTMSPSRSVANSGL 281

Query: 163 ---------------------KDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRAR 201
                                   +S  FH+FV+  L +NP  RP+A  LL         
Sbjct: 282 SDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN-------- 333

Query: 202 VAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEPDDDGEIPNVP 261
                             H FFK    KR A E L ++  P T  T+ E     +   + 
Sbjct: 334 ------------------HSFFK--QIKRRASEALPELLRPVTPITNFEGSQSQDHSGIF 373

Query: 262 QRIQS 266
             + +
Sbjct: 374 GLVTN 378

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  172 bits (439), Expect = 4e-52
 Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 39/195 (20%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEV-AAVERKGGYNQQCDIWAVGIT 127
           DR G++KL DFG+S Q+  +I K +   G   +MAPE       + GY+ + D+W++GIT
Sbjct: 160 DRSGNIKLCDFGISGQLVDSIAKTR-DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGIT 218

Query: 128 AIELAELQPPMFDLHPM-RALFLMSKSGFKPPALKD--KDRWSSTFHNFVKIALTKNPKK 184
             ELA  + P    + +   L  + K    PP L +  +  +S +F NFV + LTK+  K
Sbjct: 219 LYELATGRFPYPKWNSVFDQLTQVVKG--DPPQLSNSEEREFSPSFINFVNLCLTKDESK 276

Query: 185 RPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK------YDMSKRVAIELLQK 238
           RP   +LL+                          HPF         +++  V   L Q 
Sbjct: 277 RPKYKELLK--------------------------HPFILMYEERAVEVACYVCKILDQM 310

Query: 239 VSNPPTTYTDLEPDD 253
            + P +         
Sbjct: 311 PATPSSPMYVDHHHH 325

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 65.4 bits (160), Expect = 2e-12
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 15  ERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM-RALFLMSKSGFKPPALKDKD 69
             + GY+ + D+W++GIT  ELA  + P    + +   L  + K    PP L + +
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKG--DPPQLSNSE 254

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  171 bits (434), Expect = 2e-51
 Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 37/185 (20%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEV--AAVERKGGYNQQCDIWAVGI 126
           D  G +KL DFG+S ++     K     G   +MAPE        K  Y+ + D+W++GI
Sbjct: 159 DERGQIKLCDFGISGRLVDDKAKD-RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGI 217

Query: 127 TAIELAELQPPMFDLHP-MRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
           + +ELA  Q P  +       L  + +   +PP L     +S  F +FVK  LTK+ +KR
Sbjct: 218 SLVELATGQFPYKNCKTDFEVLTKVLQE--EPPLLPGHMGFSGDFQSFVKDCLTKDHRKR 275

Query: 186 PTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAI-----ELLQKVS 240
           P  +KLL+                          H F K   +  V +     +++ K  
Sbjct: 276 PKYNKLLE--------------------------HSFIKRYETLEVDVASWFKDVMAKTE 309

Query: 241 NPPTT 245
           +P + 
Sbjct: 310 SPRSG 314

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 62.8 bits (153), Expect = 2e-11
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 15  ERKGGYNQQCDIWAVGITAIELAELQPPMFDLHP-MRALFLMSKSGFKPPALKDKDR 70
             K  Y+ + D+W++GI+ +ELA  Q P  +       L  + +   +PP L     
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE--EPPLLPGHMG 255

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  159 bits (405), Expect = 2e-47
 Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 32/165 (19%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEV-AAVERKGGYNQQCDIWAVGIT 127
           +  G VK+ DFG+S  +   + K     G   +MAPE       + GY+ + DIW++GIT
Sbjct: 144 NALGQVKMCDFGISGYLVDDVAKD-IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGIT 202

Query: 128 AIELAELQPPMFDL-HPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
            IELA L+ P      P + L  + +     P L   D++S+ F +F    L KN K+RP
Sbjct: 203 MIELAILRFPYDSWGTPFQQLKQVVEE--PSPQLPA-DKFSAEFVDFTSQCLKKNSKERP 259

Query: 187 TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRV 231
           T  +L+Q                          HPFF    SK  
Sbjct: 260 TYPELMQ--------------------------HPFFTLHESKGT 278

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 58.4 bits (142), Expect = 4e-10
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)

Query: 15  ERKGGYNQQCDIWAVGITAIELAELQPPMFDL-HPMRALFLMSKSGFKPPALKD 67
             + GY+ + DIW++GIT IELA L+ P      P + L  + +     P L  
Sbjct: 185 LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE--PSPQLPA 236

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  158 bits (401), Expect = 2e-46
 Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 10/127 (7%)

Query: 72  GDVKLADFGVSAQIT-----ATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
               L DFG +  +       ++       GT   MAPEV  V  K   + + DIW+   
Sbjct: 188 SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV--VMGKP-CDAKVDIWSSCC 244

Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
             + +     P            ++     PP  +     +      ++  L K P  R 
Sbjct: 245 MMLHMLNGCHPWTQYFRGPLCLKIASEP--PPIREIPPSCAPLTAQAIQEGLRKEPVHRA 302

Query: 187 TADKLLQ 193
           +A +L +
Sbjct: 303 SAMELRR 309

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 64.0 bits (156), Expect = 8e-12
 Identities = 8/61 (13%), Positives = 17/61 (27%), Gaps = 3/61 (4%)

Query: 19  GYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLAD 78
             + + DIW+     + +     P            ++     PP  +    C  +  A 
Sbjct: 232 PCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEP--PPIREIPPSCAPL-TAQ 288

Query: 79  F 79
            
Sbjct: 289 A 289

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  146 bits (371), Expect = 2e-42
 Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 5/123 (4%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G +K++DFG S ++       ++F GT  +MAPE+     + GY +  DIW++G T IE+
Sbjct: 160 GVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR-GYGKAADIWSLGCTIIEM 218

Query: 132 AELQPPMFDL-HPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADK 190
           A  +PP ++L  P  A+F +      P      +  S+    F+      +P KR  A+ 
Sbjct: 219 ATGKPPFYELGEPQAAMFKVGMFKVHPEI---PESMSAEAKAFILKCFEPDPDKRACAND 275

Query: 191 LLQ 193
           LL 
Sbjct: 276 LLV 278

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 55.0 bits (133), Expect = 5e-09
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 17  KGGYNQQCDIWAVGITAIELAELQPPMFDL-HPMRALFLMSKSGFKPP 63
             GY +  DIW++G T IE+A  +PP ++L  P  A+F +      P 
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE 246

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  144 bits (366), Expect = 1e-41
 Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 8/122 (6%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VK+ D G++    A+    K+ IGTP +MAPE+     +  Y++  D++A G+  +E+
Sbjct: 169 GSVKIGDLGLATLKRAS--FAKAVIGTPEFMAPEMY----EEKYDESVDVYAFGMCMLEM 222

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
           A  + P  +      ++    SG KP +              ++  + +N  +R +   L
Sbjct: 223 ATSEYPYSECQNAAQIYRRVTSGVKPASFDKV--AIPEVKEIIEGCIRQNKDERYSIKDL 280

Query: 192 LQ 193
           L 
Sbjct: 281 LN 282

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 65.8 bits (161), Expect = 1e-12
 Identities = 12/63 (19%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 17  KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKL 76
           +  Y++  D++A G+  +E+A  + P  +      ++    SG KP +    D+    ++
Sbjct: 203 EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASF---DKVAIPEV 259

Query: 77  ADF 79
            + 
Sbjct: 260 KEI 262

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  139 bits (352), Expect = 6e-39
 Identities = 46/202 (22%), Positives = 75/202 (37%), Gaps = 70/202 (34%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           +  G++KL DFGVS Q+  ++    SF+GT  +M+PE     +   Y+ Q DIW++G++ 
Sbjct: 166 NSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERL---QGTHYSVQSDIWSMGLSL 220

Query: 129 IELAELQPPM--------------------------------------FDLHPMRALF-L 149
           +E+A  + P+                                       D  P  A+F L
Sbjct: 221 VEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFEL 280

Query: 150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKG 209
           +     +PP       +S  F +FV   L KNP +R    +L+                 
Sbjct: 281 LDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV---------------- 324

Query: 210 GYNQQCDIWAHPFFKYDMSKRV 231
                     H F K   ++ V
Sbjct: 325 ----------HAFIKRSDAEEV 336

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 2/32 (6%)

Query: 13  AVER--KGGYNQQCDIWAVGITAIELAELQPP 42
           + ER     Y+ Q DIW++G++ +E+A  + P
Sbjct: 198 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  135 bits (342), Expect = 6e-38
 Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 9/139 (6%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G VKL D G+    ++      S +GTPY+M+PE   +    GYN + DIW++G    E+
Sbjct: 173 GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER--IHEN-GYNFKSDIWSLGCLLYEM 229

Query: 132 AELQPPMFDLHPMRALFLMSK--SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD 189
           A LQ P F    M    L  K      PP     D +S      V + +  +P+KRP   
Sbjct: 230 AALQSP-FYGDKMNLYSLCKKIEQCDYPPLP--SDHYSEELRQLVNMCINPDPEKRPDVT 286

Query: 190 KLLQVI-LIHRARVAAVER 207
            +  V   +H    +++E 
Sbjct: 287 YVYDVAKRMHACTASSLEH 305

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 19  GYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK--SGFKPP 63
           GYN + DIW++G    E+A LQ P F    M    L  K      PP
Sbjct: 212 GYNFKSDIWSLGCLLYEMAALQSP-FYGDKMNLYSLCKKIEQCDYPP 257

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  134 bits (340), Expect = 1e-37
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 11/125 (8%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
              G  KL DFG+  ++       +   G P +MAPE+     +G Y    D++++G+T 
Sbjct: 191 GPRGRCKLGDFGLLVELGTA-GAGEVQEGDPRYMAPELL----QGSYGTAADVFSLGLTI 245

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
           +E+A            + L      G+ PP        SS   + + + L  +PK R TA
Sbjct: 246 LEVACNMELPHGGEGWQQLR----QGYLPPEFTAG--LSSELRSVLVMMLEPDPKLRATA 299

Query: 189 DKLLQ 193
           + LL 
Sbjct: 300 EALLA 304

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 4/52 (7%)

Query: 17  KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDK 68
           +G Y    D++++G+T +E+A            + L      G+ PP     
Sbjct: 229 QGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLR----QGYLPPEFTAG 276

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  129 bits (326), Expect = 9e-36
 Identities = 25/128 (19%), Positives = 56/128 (43%), Gaps = 13/128 (10%)

Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
            K+ D G   +I    +  +   G   ++A EV  ++    +  + DI+A+ +T +  A 
Sbjct: 173 FKIGDLGHVTRI----SSPQVEEGDSRFLANEV--LQENYTHLPKADIFALALTVVCAAG 226

Query: 134 LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
            +P   +      +    + G + P +      S  F   +K+ +  +P++RP+A  L++
Sbjct: 227 AEPLPRNGDQWHEI----RQG-RLPRIPQV--LSQEFTELLKVMIHPDPERRPSAMALVK 279

Query: 194 VILIHRAR 201
             ++  A 
Sbjct: 280 HSVLLSAS 287

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 8/45 (17%), Positives = 18/45 (40%), Gaps = 4/45 (8%)

Query: 19  GYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP 63
            +  + DI+A+ +T +  A  +P   +      +    + G  P 
Sbjct: 207 THLPKADIFALALTVVCAAGAEPLPRNGDQWHEI----RQGRLPR 247

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  127 bits (322), Expect = 1e-34
 Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 8/199 (4%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
            + G V+L DFG++  + +T+   ++ IGTPY+++PE+   E K  YN + DIWA+G   
Sbjct: 159 TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI--CENK-PYNNKSDIWALGCVL 215

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            EL  L+   F+   M+ L L   SG   P +     +S    + V     +NP+ RP+ 
Sbjct: 216 YELCTLKHA-FEAGSMKNLVLKIISG-SFPPV--SLHYSYDLRSLVSQLFKRNPRDRPSV 271

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTD 248
           + +L+   I +     +  +    + C      F    +  +        +S  P     
Sbjct: 272 NSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPASGQNSISVMPAQKIT 331

Query: 249 LEPDDDGEIPNVPQRIQSR 267
            +P     IP   ++   +
Sbjct: 332 -KPAAKYGIPLAYKKYGDK 349

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 45.9 bits (109), Expect = 7e-06
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 19  GYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP 63
            YN + DIWA+G    EL  L+   F+   M+ L L   SG  PP
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHA-FEAGSMKNLVLKIISGSFPP 244

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  121 bits (305), Expect = 7e-33
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 13/140 (9%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
                VK+ DFG+   +     KR    GT  +M+PE   +  +  Y ++ D++A+G+  
Sbjct: 156 VDTKQVKIGDFGLVTSLKND-GKRTRSKGTLRYMSPEQ--ISSQD-YGKEVDLYALGLIL 211

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            EL  +    F+       F   + G           +       ++  L+K P+ RP  
Sbjct: 212 AELLHVCDTAFE---TSKFFTDLRDGIISD------IFDKKEKTLLQKLLSKKPEDRPNT 262

Query: 189 DKLLQVILIHRARVAAVERK 208
            ++L+ + + +      ER 
Sbjct: 263 SEILRTLTVWKKSPEKNERH 282

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 42.3 bits (100), Expect = 8e-05
 Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 3/50 (6%)

Query: 14  VERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP 63
                 Y ++ D++A+G+   EL  +    F+       F   + G    
Sbjct: 192 QISSQDYGKEVDLYALGLILAELLHVCDTAFE---TSKFFTDLRDGIISD 238

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  115 bits (289), Expect = 2e-30
 Identities = 35/186 (18%), Positives = 67/186 (36%), Gaps = 51/186 (27%)

Query: 69  DRCGDVKLADFGVSAQITATI--------------NKRKSFIGTPYWMAPEVAAVERKGG 114
           D   +VK+ DFG++  +  ++              +   S IGT  ++A EV  ++  G 
Sbjct: 150 DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEV--LDGTGH 207

Query: 115 YNQQCDIWAVGITAIELAELQPP---MFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFH 171
           YN++ D++++GI   E+  + P    M  ++ ++ L        + P     D       
Sbjct: 208 YNEKIDMYSLGIIFFEM--IYPFSTGMERVNILKKLR---SVSIEFPP-DFDDNKMKVEK 261

Query: 172 NFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRV 231
             +++ +  +P KRP A  LL                             +        V
Sbjct: 262 KIIRLLIDHDPNKRPGARTLLN--------------------------SGWLPVKHQDEV 295

Query: 232 AIELLQ 237
             E L+
Sbjct: 296 IKEALK 301

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 11/53 (20%), Positives = 26/53 (49%), Gaps = 8/53 (15%)

Query: 14  VERKGGYNQQCDIWAVGITAIELAELQPP---MFDLHPMRALFLMSKSGFKPP 63
           ++  G YN++ D++++GI   E+  + P    M  ++ ++ L        + P
Sbjct: 202 LDGTGHYNEKIDMYSLGIIFFEM--IYPFSTGMERVNILKKLR---SVSIEFP 249

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  117 bits (295), Expect = 3e-30
 Identities = 33/180 (18%), Positives = 67/180 (37%), Gaps = 35/180 (19%)

Query: 66  KDKDRCGDVKLADFGVSAQITA---TINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIW 122
            +        ++DFG+  ++     + ++R    GT  W+APE+ + + K       DI+
Sbjct: 154 PNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIF 213

Query: 123 AVG-ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKN 181
           + G +    ++E   P       +A  L+         L  +          ++  +  +
Sbjct: 214 SAGCVFYYVISEGSHPFGKSLQRQANILLGA--CSLDCLHPEKHEDVIARELIEKMIAMD 271

Query: 182 PKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSN 241
           P+KRP+A  +L+                          HPFF   + K+  ++  Q VS+
Sbjct: 272 PQKRPSAKHVLK--------------------------HPFFW-SLEKQ--LQFFQDVSD 302

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 8/56 (14%), Positives = 18/56 (32%), Gaps = 1/56 (1%)

Query: 15  ERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD 69
           + K       DI++ G +    ++E   P       +A  L+          +  +
Sbjct: 201 DCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHE 256

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  113 bits (285), Expect = 6e-30
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 7/122 (5%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
            +VKL DFG++  +    +  K+F+GTPY+M+PE   + R   YN++ DIW++G    EL
Sbjct: 153 QNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQ--MNRM-SYNEKSDIWSLGCLLYEL 209

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
             L PP F     + L    + G          R+S   +  +   L      RP+ +++
Sbjct: 210 CALMPP-FTAFSQKELAGKIREGKFRR---IPYRYSDELNEIITRMLNLKDYHRPSVEEI 265

Query: 192 LQ 193
           L+
Sbjct: 266 LE 267

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 20  YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP 63
           YN++ DIW++G    EL  L PP F     + L    + G    
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPP-FTAFSQKELAGKIREGKFRR 235

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  106 bits (267), Expect = 8e-27
 Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 14/133 (10%)

Query: 72  GDVKLADFGVSAQITA--TINKRKSFIGTPYWMAPEV--------AAVERKGGYNQQCDI 121
           G +KL DFG++ Q+    T   + S +GT  +M PE            + K   + + D+
Sbjct: 144 GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 203

Query: 122 WAVGITAIELAELQPPMFDL-HPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
           W++G     +   + P   + + +  L  +     +       D       + +K  L +
Sbjct: 204 WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE---FPDIPEKDLQDVLKCCLKR 260

Query: 181 NPKKRPTADKLLQ 193
           +PK+R +  +LL 
Sbjct: 261 DPKQRISIPELLA 273

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  103 bits (259), Expect = 7e-26
 Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 14/133 (10%)

Query: 72  GDVKLADFGVSAQITA--TINKRKSFIGTPYWMAPEV--------AAVERKGGYNQQCDI 121
           G +KL DFG++ Q+    T   + S +GT  +M PE            + K   + + D+
Sbjct: 163 GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 222

Query: 122 WAVGITAIELAELQPPMFDL-HPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
           W++G     +   + P   + + +  L  +     +       D       + +K  L +
Sbjct: 223 WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE---FPDIPEKDLQDVLKCCLKR 279

Query: 181 NPKKRPTADKLLQ 193
           +PK+R +  +LL 
Sbjct: 280 DPKQRISIPELLA 292

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  104 bits (261), Expect = 9e-26
 Identities = 27/133 (20%), Positives = 54/133 (40%), Gaps = 14/133 (10%)

Query: 72  GDVKLADFGVSAQITA--TINKRKSFIGTPYWMAPEV--------AAVERKGGYNQQCDI 121
           G +KL DFG++ Q+    T   + S +G   +M PE            + K   + + D+
Sbjct: 191 GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 250

Query: 122 WAVGITAIELAELQPPMFDL-HPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
           W++G     +   + P   + + +  L  +     +       D       + +K  L +
Sbjct: 251 WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE---FPDIPEKDLQDVLKCCLKR 307

Query: 181 NPKKRPTADKLLQ 193
           +PK+R +  +LL 
Sbjct: 308 DPKQRISIPELLA 320

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 95.9 bits (239), Expect = 3e-23
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 21/137 (15%)

Query: 69  DRCGDVKLADFGVSAQITAT------------INKRKSFIGTPYWMAPEVAAVERKGGYN 116
                VK+ DFG+   +                 +    +GT  +M+PE         Y+
Sbjct: 152 TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQI---HGNSYS 208

Query: 117 QQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKI 176
            + DI+++G+   EL     P              ++   PP    K       +  V+ 
Sbjct: 209 HKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPLFTQK---YPCEYVMVQD 262

Query: 177 ALTKNPKKRPTADKLLQ 193
            L+ +P +RP A  +++
Sbjct: 263 MLSPSPMERPEAINIIE 279

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 97.2 bits (242), Expect = 5e-23
 Identities = 36/198 (18%), Positives = 71/198 (35%), Gaps = 38/198 (19%)

Query: 53  FLMSKSGFKPPALKDKDRCGDVKLADFGVSAQI----TATINKRKSFIGTPYWMAPEV-- 106
            L+S S       +       + ++DFG+  ++    ++      +  GT  W APE+  
Sbjct: 146 ILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLE 205

Query: 107 --AAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDK 163
               ++ K    +  DI+++G +    L++ + P  D +   +  +              
Sbjct: 206 ESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHD 265

Query: 164 DRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFF 223
               +   + +   +  +P KRPTA K+L+                          HP F
Sbjct: 266 RSLIAEATDLISQMIDHDPLKRPTAMKVLR--------------------------HPLF 299

Query: 224 KYDMSKRVAIELLQKVSN 241
               SK++    L KVS+
Sbjct: 300 W-PKSKKLEF--LLKVSD 314

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 94.3 bits (235), Expect = 2e-22
 Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 17/140 (12%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFI---------GTPYWMAPEVAAVERKGGY 115
           L   +  G   L D G   Q    +   +  +          T  + APE+ +V+     
Sbjct: 166 LLGDE--GQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVI 223

Query: 116 NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK--SGFKPPALKDKDRWSSTFHNF 173
           +++ D+W++G     +   + P +D+   +   +     +    P      R SS     
Sbjct: 224 DERTDVWSLGCVLYAMMFGEGP-YDMVFQKGDSVALAVQNQLSIP---QSPRHSSALWQL 279

Query: 174 VKIALTKNPKKRPTADKLLQ 193
           +   +T +P +RP    LL 
Sbjct: 280 LNSMMTVDPHQRPHIPLLLS 299

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 85.7 bits (212), Expect = 2e-19
 Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 21/137 (15%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSF------------IGTPYWMAPEVAAVERKGGYN 116
                VK+ DFG+   +     ++               +GT  +M+PE         Y+
Sbjct: 198 TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQI---HGNNYS 254

Query: 117 QQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKI 176
            + DI+++G+   EL               +    ++   P     K       H  V+ 
Sbjct: 255 HKVDIFSLGLILFELLY---SFSTQMERVRIITDVRNLKFPLLFTQK---YPQEHMMVQD 308

Query: 177 ALTKNPKKRPTADKLLQ 193
            L+ +P +RP A  +++
Sbjct: 309 MLSPSPTERPEATDIIE 325

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 81.2 bits (201), Expect = 1e-17
 Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 19/136 (13%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  K+    VKL  FGV+ Q+  +       +GTP++MAPEV    ++  Y +  D+W  
Sbjct: 163 LASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV---KREPYGKPVDVWGC 219

Query: 125 G-ITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKDKDRW---SSTFHNFVKIA 177
           G I  I L+    P +       LF     G     P       +W   S +  + V+  
Sbjct: 220 GVILFILLSGC-LPFYGTKER--LFEGIIKGKYKMNPR------QWSHISESAKDLVRRM 270

Query: 178 LTKNPKKRPTADKLLQ 193
           L  +P +R T  + L 
Sbjct: 271 LMLDPAERITVYEALN 286

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 80.6 bits (199), Expect = 1e-17
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 19/137 (13%)

Query: 69  DRCGDVKLADFG------------VSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYN 116
              G +KL DFG             SAQ  A + +  +   TP +  PE+  +       
Sbjct: 172 SNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIG 231

Query: 117 QQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKI 176
           ++ DIWA+G     L   Q P F+      +       +  P     D   + FH+ ++ 
Sbjct: 232 EKQDIWALGCILYLLCFRQHP-FEDGAKLRIV---NGKYSIP---PHDTQYTVFHSLIRA 284

Query: 177 ALTKNPKKRPTADKLLQ 193
            L  NP++R +  +++ 
Sbjct: 285 MLQVNPEERLSIAEVVH 301

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 80.9 bits (200), Expect = 2e-17
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 9/133 (6%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  ++    +K+ DFG S  +  T +  ++  GTP ++APEV       GYN+  D W++
Sbjct: 272 LSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 330

Query: 125 G-ITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKDKDRWSSTFHNFVKIALTK 180
           G I  I L+   PP  +     +L     SG   F P         S    + VK  L  
Sbjct: 331 GVILFICLSGY-PPFSEHRTQVSLKDQITSGKYNFIPE---VWAEVSEKALDLVKKLLVV 386

Query: 181 NPKKRPTADKLLQ 193
           +PK R T ++ L+
Sbjct: 387 DPKARFTTEEALR 399

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 80.9 bits (200), Expect = 2e-17
 Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 24/138 (17%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L+ K++   +K+ DFG+SA       K K  +GT Y++APEV     +  Y+++CD+W++
Sbjct: 169 LESKEKDALIKIVDFGLSAVFENQ-KKMKERLGTAYYIAPEVL----RKKYDEKCDVWSI 223

Query: 125 G-ITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKD-----KDRWSSTFHNFVK 175
           G I  I LA   P  F     + +    + G   F  P  K+     KD         +K
Sbjct: 224 GVILFILLAGYPP--FGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKD--------LIK 273

Query: 176 IALTKNPKKRPTADKLLQ 193
             L  + ++R +A + L+
Sbjct: 274 QMLQFDSQRRISAQQALE 291

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 80.1 bits (198), Expect = 4e-17
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 18/135 (13%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L+ K +  ++++ DFG+S    A+  K K  IGT Y++APEV      G Y+++CD+W+ 
Sbjct: 159 LESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVL----HGTYDEKCDVWST 213

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKDKDRW---SSTFHNFVKIAL 178
           G+    L    PP F+      +    + G   F      +  +W   S +  + ++  L
Sbjct: 214 GVILYILLSGCPP-FNGANEYDILKKVEKGKYTF------ELPQWKKVSESAKDLIRKML 266

Query: 179 TKNPKKRPTADKLLQ 193
           T  P  R +A   L 
Sbjct: 267 TYVPSMRISARDALD 281

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 78.5 bits (194), Expect = 6e-17
 Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           VK+ DFG+S    +T    KS  GTP WMAPEV    R    N++ D+++ G+   ELA 
Sbjct: 178 VKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVL---RDEPSNEKSDVYSFGVILWELAT 234

Query: 134 LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT 187
           LQ P  +L+P + +  +     +    ++    +      ++   T  P KRP+
Sbjct: 235 LQQPWGNLNPAQVVAAVGFKCKRLEIPRN---LNPQVAAIIEGCWTNEPWKRPS 285

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 78.9 bits (195), Expect = 6e-17
 Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 19/138 (13%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  ++    +K+ DFG S  +  T +  ++  GTP ++APEV       GYN+  D W++
Sbjct: 147 LSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 205

Query: 125 G-ITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKD-----KDRWSSTFHNFVK 175
           G I  I L+   PP  +     +L     SG   F P    +      D         VK
Sbjct: 206 GVILFICLSGY-PPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD--------LVK 256

Query: 176 IALTKNPKKRPTADKLLQ 193
             L  +PK R T ++ L+
Sbjct: 257 KLLVVDPKARFTTEEALR 274

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 79.3 bits (196), Expect = 7e-17
 Identities = 44/136 (32%), Positives = 61/136 (44%), Gaps = 18/136 (13%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  K +   VKLADFG++ ++         F GTP +++PEV    RK  Y +  D+WA 
Sbjct: 143 LASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL---RKDPYGKPVDLWAC 199

Query: 125 G-ITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKDKDRW---SSTFHNFVKIA 177
           G I  I L    PP F       L+   K+G   F  P       W   +    + +   
Sbjct: 200 GVILYILLVGY-PP-FWDEDQHRLYQQIKAGAYDFPSP------EWDTVTPEAKDLINKM 251

Query: 178 LTKNPKKRPTADKLLQ 193
           LT NP KR TA + L+
Sbjct: 252 LTINPSKRITAAEALK 267

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 79.3 bits (196), Expect = 9e-17
 Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 18/135 (13%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L+ K++  D+K+ DFG+S        K K  IGT Y++APEV     +G Y+++CD+W+ 
Sbjct: 154 LESKEKDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVL----RGTYDEKCDVWSA 208

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKDKDRW---SSTFHNFVKIAL 178
           G+    L    PP F       +    ++G   F      D  +W   S    + ++  L
Sbjct: 209 GVILYILLSGTPP-FYGKNEYDILKRVETGKYAF------DLPQWRTISDDAKDLIRKML 261

Query: 179 TKNPKKRPTADKLLQ 193
           T +P  R TA + L+
Sbjct: 262 TFHPSLRITATQCLE 276

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 77.6 bits (192), Expect = 1e-16
 Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 19/136 (13%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  K +   VKLADFG++ ++  +      F GTP +++PEV    +K  Y++  DIWA 
Sbjct: 138 LASKAKGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPEVL---KKDPYSKPVDIWAC 193

Query: 125 G-ITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKDKDRW---SSTFHNFVKIA 177
           G I  I L    PP F       L+   K+G   +  P       W   +    + +   
Sbjct: 194 GVILYILLVGY-PP-FWDEDQHRLYAQIKAGAYDYPSP------EWDTVTPEAKSLIDSM 245

Query: 178 LTKNPKKRPTADKLLQ 193
           LT NPKKR TAD+ L+
Sbjct: 246 LTVNPKKRITADQALK 261

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 79.0 bits (195), Expect = 1e-16
 Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 20/136 (14%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L++K+   ++K+ DFG+S+  +    K +  +GT Y++APEV     K  YN++CD+W+ 
Sbjct: 179 LENKNSLLNIKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVL----KKKYNEKCDVWSC 233

Query: 125 G-ITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKDKDRW---SSTFHNFVKIA 177
           G I  I L    P  F     + +    + G   F      D + W   S      +K+ 
Sbjct: 234 GVIMYILLCGYPP--FGGQNDQDIIKKVEKGKYYF------DFNDWKNISDEAKELIKLM 285

Query: 178 LTKNPKKRPTADKLLQ 193
           LT +  KR TA++ L 
Sbjct: 286 LTYDYNKRCTAEEALN 301

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 77.2 bits (191), Expect = 1e-16
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 20/136 (14%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
                    +KL DFG++A+        ++ +GTPY+++P+V     +G Y  +CD W+ 
Sbjct: 139 FLTDSPDSPLKLIDFGLAARFKPG-KMMRTKVGTPYYVSPQVL----EGLYGPECDEWSA 193

Query: 125 G-ITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKDKDRW---SSTFHNFVKIA 177
           G +  + L    PP F       + L  + G   F       +  W   S    + ++  
Sbjct: 194 GVMMYVLLCGY-PP-FSAPTDSEVMLKIREGTFTF------PEKDWLNVSPQAESLIRRL 245

Query: 178 LTKNPKKRPTADKLLQ 193
           LTK+PK+R T+ + L+
Sbjct: 246 LTKSPKQRITSLQALE 261

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 77.7 bits (192), Expect = 2e-16
 Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 19/136 (13%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L  K +   VKLADFG++ ++  +      F GTP +++PEV    +K  Y++  DIWA 
Sbjct: 161 LASKAKGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPEVL---KKDPYSKPVDIWAC 216

Query: 125 G-ITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKDKDRW---SSTFHNFVKIA 177
           G I  I L    PP F       L+   K+G   +  P       W   +    + +   
Sbjct: 217 GVILYILLVGY-PP-FWDEDQHRLYAQIKAGAYDYPSP------EWDTVTPEAKSLIDSM 268

Query: 178 LTKNPKKRPTADKLLQ 193
           LT NPKKR TAD+ L+
Sbjct: 269 LTVNPKKRITADQALK 284

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 77.4 bits (191), Expect = 2e-16
 Identities = 38/138 (27%), Positives = 57/138 (41%), Gaps = 22/138 (15%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
                    +K+ADFG+S  +       K+  GTP + APE+    R   Y  + D+W+V
Sbjct: 181 YATPAPDAPLKIADFGLSKIVEHQ-VLMKTVCGTPGYCAPEIL---RGCAYGPEVDMWSV 236

Query: 125 G-ITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKD-----KDRWSSTFHNFVK 175
           G IT I L     P +D    + +F    +    F  P   +     KD         V+
Sbjct: 237 GIITYILLCGF-EPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKD--------LVR 287

Query: 176 IALTKNPKKRPTADKLLQ 193
             +  +PKKR T  + LQ
Sbjct: 288 KLIVLDPKKRLTTFQALQ 305

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 76.5 bits (189), Expect = 2e-16
 Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 19/135 (14%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
            +D      +K+ DFG++    +      +  GT  +MAPEV     K     +CDIW+ 
Sbjct: 157 FQDTSPHSPIKIIDFGLAELFKSD-EHSTNAAGTALYMAPEVF----KRDVTFKCDIWSA 211

Query: 125 G-ITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKDKDRW--SSTFHNFVKIAL 178
           G +    L     P F    +  +   +      +        +    +    + +K  L
Sbjct: 212 GVVMYFLLTGC-LP-FTGTSLEEVQQKATYKEPNY------AVECRPLTPQAVDLLKQML 263

Query: 179 TKNPKKRPTADKLLQ 193
           TK+P++RP+A ++L 
Sbjct: 264 TKDPERRPSAAQVLH 278

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 77.4 bits (191), Expect = 3e-16
 Identities = 32/156 (20%), Positives = 60/156 (38%), Gaps = 28/156 (17%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G V + DF ++A +     +  +  GT  +MAPE+ +  +  GY+   D W++G+TA
Sbjct: 149 DEHGHVHITDFNIAAMLPRE-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTA 207

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            EL   + P + +    +   +  + F+   +     WS    + +K  L  NP +R   
Sbjct: 208 YELLRGRRP-YHIRSSTSSKEIVHT-FETTVVTYPSAWSQEMVSLLKKLLEPNPDQR--- 262

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
                                  +   D+   P+  
Sbjct: 263 -------F------------SQLS---DVQNFPYMN 276

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 76.1 bits (188), Expect = 3e-16
 Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 20/136 (14%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L+ K++  D+K+ DFG+S        K K  IGT Y++APEV     +G Y+++CD+W+ 
Sbjct: 154 LESKEKDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVL----RGTYDEKCDVWSA 208

Query: 125 G-ITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKDKDRW---SSTFHNFVKIA 177
           G I  I L+   PP F       +    ++G   F      D  +W   S    + ++  
Sbjct: 209 GVILYILLSGT-PP-FYGKNEYDILKRVETGKYAF------DLPQWRTISDDAKDLIRKM 260

Query: 178 LTKNPKKRPTADKLLQ 193
           LT +P  R TA + L+
Sbjct: 261 LTFHPSLRITATQCLE 276

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 76.6 bits (189), Expect = 3e-16
 Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 27/144 (18%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
             D++   ++K+ DFG +          K+   T ++ APE+     + GY++ CD+W++
Sbjct: 139 FTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL---NQNGYDESCDLWSL 195

Query: 125 G-ITAIELAELQPPMFD------LHPMRALFLMSKSG---FKPPALKD-----KDRWSST 169
           G I    L+  Q P               +    K G   F+  A K+     KD     
Sbjct: 196 GVILYTMLSG-QVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKD----- 249

Query: 170 FHNFVKIALTKNPKKRPTADKLLQ 193
               ++  LT +P KR     L  
Sbjct: 250 ---LIQGLLTVDPNKRLKMSGLRY 270

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 77.0 bits (189), Expect = 4e-16
 Identities = 17/130 (13%), Positives = 34/130 (26%), Gaps = 10/130 (7%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
              G + L D     ++      R      P   AP          +    + W +G++ 
Sbjct: 228 MPDGRLMLGDVSALWKV----GTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSI 283

Query: 129 IELAELQPPMFDLHP-----MRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPK 183
             +  L  P F L             +   G    A              +   L  + +
Sbjct: 284 YRVWCLFLP-FGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRR 342

Query: 184 KRPTADKLLQ 193
           +R    + ++
Sbjct: 343 RRLLPLEAME 352

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 77.0 bits (189), Expect = 4e-16
 Identities = 17/133 (12%), Positives = 33/133 (24%), Gaps = 21/133 (15%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--------RKGGYNQQCD 120
           D+ G V L  F    +       R     +  +  PE+ A          R+       D
Sbjct: 240 DQRGGVFLTGFEHLVRD----GARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFD 295

Query: 121 IWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
            WA+G+    +     P                       +            ++  L  
Sbjct: 296 AWALGLVIYWIWCADLP-ITKDAALGGS--------EWIFRSCKNIPQPVRALLEGFLRY 346

Query: 181 NPKKRPTADKLLQ 193
             + R    + ++
Sbjct: 347 PKEDRLLPLQAME 359

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 76.2 bits (188), Expect = 4e-16
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 22/139 (15%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
              K++   +KL DFG + + T   N  ++   TPY++APEV        Y++ CD+W++
Sbjct: 161 YTSKEKDAVLKLTDFGFAKETTQ--NALQTPCYTPYYVAPEVL---GPEKYDKSCDMWSL 215

Query: 125 G-ITAIELAELQPPMFDLHPMR---ALFLMSKSG---FKPPALKDKDRW---SSTFHNFV 174
           G I  I L    PP +          +    + G   F  P       W   S      +
Sbjct: 216 GVIMYILLCG-FPPFYSNTGQAISPGMKRRIRLGQYGFPNPE------WSEVSEDAKQLI 268

Query: 175 KIALTKNPKKRPTADKLLQ 193
           ++ L  +P +R T  + + 
Sbjct: 269 RLLLKTDPTERLTITQFMN 287

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 76.3 bits (188), Expect = 6e-16
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 49/192 (25%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGIT 127
           D+ G VKL+DFG S  +     K K   GT  +M PE      +  Y   + DIW++GI 
Sbjct: 186 DKNGRVKLSDFGESEYMVD--KKIKGSRGTYEFMPPEF--FSNESSYNGAKVDIWSLGIC 241

Query: 128 AIELAELQPPMFDLHPMRALFLMSKSG-FKPPALKDKDRWSSTFH--------------N 172
              +     P      +  LF   ++   + P  ++   +  T                +
Sbjct: 242 LYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDID 301

Query: 173 FVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK---YDMSK 229
           F+K+ L KNP +R T++                          D   H +      +  +
Sbjct: 302 FLKLFLRKNPAERITSE--------------------------DALKHEWLADTNIEDLR 335

Query: 230 RVAIELLQKVSN 241
             + EL +K   
Sbjct: 336 EFSKELYKKRKK 347

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 75.0 bits (185), Expect = 9e-16
 Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 5/134 (3%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRK--SFIGTPYWMAPEVAAVERKGGYNQQCDIW 122
              +D    VK+ DFG++ + +      +     G+  WMAPEV  ++    Y+ Q D++
Sbjct: 152 FLHEDNT--VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVY 209

Query: 123 AVGITAIELAELQPPMFDLHPMRA-LFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKN 181
           A GI   EL   Q P  +++     + ++ +    P   K +          +   L K 
Sbjct: 210 AFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKK 269

Query: 182 PKKRPTADKLLQVI 195
             +RP+  ++L  I
Sbjct: 270 RDERPSFPRILAEI 283

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 75.3 bits (185), Expect = 1e-15
 Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 22/141 (15%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKR----KSFIGTPYWMAPEVAAVERKGGYNQQCD 120
           L   ++  ++KL DFG+S +     N       +  GTPY++APEV     +  Y  +CD
Sbjct: 200 LFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNE-SYGPKCD 258

Query: 121 IWAVGITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKD-----KDRWSSTFHN 172
            W+ G+    L     P   ++          +    F+ P         +D        
Sbjct: 259 AWSAGVLLHLLLMGAVPFPGVNDAD-TISQVLNKKLCFENPNYNVLSPLARD-------- 309

Query: 173 FVKIALTKNPKKRPTADKLLQ 193
            +   L +N  +R  A + LQ
Sbjct: 310 LLSNLLNRNVDERFDAMRALQ 330

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 73.4 bits (181), Expect = 3e-15
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 10/123 (8%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           + D+D     +++   V         +    +  P W+APE    + +    +  D+W+ 
Sbjct: 145 MIDEDMT--ARISMADVK-----FSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSF 197

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
            +   EL   + P  DL  M     ++  G +P         S      +KI + ++P K
Sbjct: 198 AVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPG---ISPHVSKLMKICMNEDPAK 254

Query: 185 RPT 187
           RP 
Sbjct: 255 RPK 257

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 74.4 bits (183), Expect = 3e-15
 Identities = 37/161 (22%), Positives = 61/161 (37%), Gaps = 31/161 (19%)

Query: 69  DRCGDVKLADFGVSAQITATINKR-KSFIGTPYWMAPEV--AAVERKGGYNQQCDIWAVG 125
           D  G ++LADFG   ++      +    +GTP +++PE+  A    KG Y  +CD W++G
Sbjct: 209 DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLG 268

Query: 126 ITAIELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPK 183
           +   E+   + P +   L       +  K  F+ P        S    + ++  L  + +
Sbjct: 269 VCMYEMLYGETPFYAESLVETYGKIMNHKERFQFP--TQVTDVSENAKDLIR-RLICSRE 325

Query: 184 KRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
            R     L                  G N   D   HPFF 
Sbjct: 326 HR-----L------------------GQNGIEDFKKHPFFS 343

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 73.0 bits (180), Expect = 4e-15
 Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 24/138 (17%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
               +    + + DFG+S           +  GTP ++APEV     +  Y++  D W++
Sbjct: 139 YLTPEENSKIMITDFGLSKMEQN--GIMSTACGTPGYVAPEVL---AQKPYSKAVDCWSI 193

Query: 125 G-ITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKD-----KDRWSSTFHNFVK 175
           G IT I L    PP F       LF   K G   F+ P   D     KD        F+ 
Sbjct: 194 GVITYILLCGY-PP-FYEETESKLFEKIKEGYYEFESPFWDDISESAKD--------FIC 243

Query: 176 IALTKNPKKRPTADKLLQ 193
             L K+P +R T +K L 
Sbjct: 244 HLLEKDPNERYTCEKALS 261

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 73.4 bits (181), Expect = 5e-15
 Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 23/138 (16%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L      GD+K+ DFG+S +I     + +  +GTP ++APE+  +          D+W +
Sbjct: 164 LSSIYPLGDIKIVDFGMSRKIGHA-CELREIMGTPEYLAPEI--LNYD-PITTATDMWNI 219

Query: 125 G-ITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKD-----KDRWSSTFHNFVK 175
           G I  + L     P F     +  +L        +             D        F++
Sbjct: 220 GIIAYMLLTHT-SP-FVGEDNQETYLNISQVNVDYSEETFSSVSQLATD--------FIQ 269

Query: 176 IALTKNPKKRPTADKLLQ 193
             L KNP+KRPTA+  L 
Sbjct: 270 SLLVKNPEKRPTAEICLS 287

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 73.5 bits (181), Expect = 5e-15
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 21/130 (16%)

Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG-ITAIELA 132
           +++ DFG + Q+ A      +   T  ++APEV  +ER+ GY+  CDIW++G +    L 
Sbjct: 159 IRICDFGFAKQLRAENGLLMTPCYTANFVAPEV--LERQ-GYDAACDIWSLGVLLYTMLT 215

Query: 133 ELQPPMFDLHPM---RALFLMSKSG---FKPPALKDKDRW---SSTFHNFVKIALTKNPK 183
               P F   P      +     SG              W   S T  + V   L  +P 
Sbjct: 216 G-YTP-FANGPDDTPEEILARIGSGKFSLSGGY------WNSVSDTAKDLVSKMLHVDPH 267

Query: 184 KRPTADKLLQ 193
           +R TA  +L+
Sbjct: 268 QRLTAALVLR 277

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 71.9 bits (177), Expect = 8e-15
 Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 8/114 (7%)

Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +K+ DFG++ +   T   + S  G   WMAPEV        +++  D+W+ G+   EL  
Sbjct: 155 LKITDFGLAREWHRT--TKMSAAGAYAWMAPEVIRASM---FSKGSDVWSYGVLLWELLT 209

Query: 134 LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT 187
            + P   +  +   + ++ +    P           F   ++     +P  RP+
Sbjct: 210 GEVPFRGIDGLAVAYGVAMNKLALPIPST---CPEPFAKLMEDCWNPDPHSRPS 260

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 72.8 bits (179), Expect = 1e-14
 Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 25/141 (17%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
              K     +KL DFG + + T+  N   +   TPY++APEV        Y++ CD+W++
Sbjct: 194 YTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVL---GPEKYDKSCDMWSL 249

Query: 125 G-ITAIELAELQPPMFDLHPMR---ALFLMSKSG---FKPPALKD-----KDRWSSTFHN 172
           G I  I L    PP +  H +     +    + G   F  P   +     K         
Sbjct: 250 GVIMYILLCG-YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM-------- 300

Query: 173 FVKIALTKNPKKRPTADKLLQ 193
            ++  L   P +R T  + + 
Sbjct: 301 LIRNLLKTEPTQRMTITEFMN 321

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 71.5 bits (176), Expect = 1e-14
 Identities = 33/172 (19%), Positives = 65/172 (37%), Gaps = 36/172 (20%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
              G++K+ADFG S    +  ++R    GT  ++ PE+  +E +  ++++ D+W++G+  
Sbjct: 143 GSAGELKIADFGWSVHAPS--SRRTDLCGTLDYLPPEM--IEGRM-HDEKVDLWSLGVLC 197

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E    +PP            +S+  F  P     D  +    + +   L  NP +RP  
Sbjct: 198 YEFLVGKPPFEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQRPML 252

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVS 240
                                      ++  HP+   + SK    +  +  S
Sbjct: 253 R--------------------------EVLEHPWITANSSKPSNCQNKESAS 278

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 72.4 bits (177), Expect = 1e-14
 Identities = 15/136 (11%), Positives = 33/136 (24%), Gaps = 12/136 (8%)

Query: 69  DRCGDVKLADFGVSAQI-TATINKRKSFIGTPYWMAPEVA--AVERKGGYNQQCDIWAVG 125
           D+ G V L  F    +   + ++        P   A  +               D W +G
Sbjct: 245 DQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLG 304

Query: 126 ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
           +    +     P  D   +                +            ++  L    + R
Sbjct: 305 LAIYWIWCADLPNTDDAALGGS---------EWIFRSCKNIPQPVRALLEGFLRYPKEDR 355

Query: 186 PTADKLLQVILIHRAR 201
               + ++     + R
Sbjct: 356 LLPLQAMETPEYEQLR 371

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 19/131 (14%)

Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEV---AAVERKGGYNQQCDIWAVG-ITA 128
           ++KL DFG S Q+     K +   GTP ++APE+   +  +   GY ++ D+W+ G I  
Sbjct: 162 NIKLTDFGFSCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220

Query: 129 IELAELQPPMFDLHPMRALFLMSKSG---FKPPALKDKDRW---SSTFHNFVKIALTKNP 182
             LA   PP F       +  M  SG   F  P       W   S T  + V   L   P
Sbjct: 221 TLLAGS-PP-FWHRKQMLMLRMIMSGNYQFGSP------EWDDYSDTVKDLVSRFLVVQP 272

Query: 183 KKRPTADKLLQ 193
           +KR TA++ L 
Sbjct: 273 QKRYTAEEALA 283

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 71.1 bits (175), Expect = 2e-14
 Identities = 32/127 (25%), Positives = 65/127 (51%), Gaps = 12/127 (9%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           +   +VK+ DFG++ ++     ++K   GTP ++APEV  + +K G++ + D+W++G   
Sbjct: 149 NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV--LSKK-GHSFEVDVWSIGCIM 205

Query: 129 IELAELQPPMFDLHPMRALFLMSKSG-FKPPALKDKDRW-SSTFHNFVKIALTKNPKKRP 186
             L   +PP F+   ++  +L  K   +  P      +  +    + ++  L  +P  RP
Sbjct: 206 YTLLVGKPP-FETSCLKETYLRIKKNEYSIP------KHINPVAASLIQKMLQTDPTARP 258

Query: 187 TADKLLQ 193
           T ++LL 
Sbjct: 259 TINELLN 265

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 72.0 bits (177), Expect = 2e-14
 Identities = 47/211 (22%), Positives = 74/211 (35%), Gaps = 51/211 (24%)

Query: 69  DRCGDVKLADFGVSAQITATINKR-KSFIGTPYWMAPEV-AAVERKGGYNQQCDIWAVGI 126
           D+ G +KLADFG   ++      R  + +GTP +++PEV  +    G Y ++CD W+VG+
Sbjct: 202 DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 261

Query: 127 TAIELAELQPPMFD--LHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
              E+     P +   L    +  +  K+    P   D    S    N +  A   + + 
Sbjct: 262 FLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDND---ISKEAKNLIC-AFLTDREV 317

Query: 185 RPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAI---ELLQKVSN 241
           R     L                  G N   +I  H FFK                + + 
Sbjct: 318 R-----L------------------GRNGVEEIKRHLFFK-------NDQWAWETLRDTV 347

Query: 242 PP----------TTYTDLEPDDDGEIPNVPQ 262
            P          T+  D   +D GE    P 
Sbjct: 348 APVVPDLSSDIDTSNFDDLEEDKGEEETFPI 378

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 72.1 bits (177), Expect = 2e-14
 Identities = 40/163 (24%), Positives = 60/163 (36%), Gaps = 33/163 (20%)

Query: 69  DRCGDVKLADFGVSAQITATINKR-KSFIGTPYWMAPEV----AAVERKGGYNQQCDIWA 123
           DRCG ++LADFG   ++ A    R    +GTP +++PE+          G Y  +CD WA
Sbjct: 196 DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWA 255

Query: 124 VGITAIELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKN 181
           +G+ A E+   Q P +           +  K     P     +       +F++  L   
Sbjct: 256 LGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPL--VDEGVPEEARDFIQ-RLLCP 312

Query: 182 PKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
           P+ R          L             G     D   HPFF 
Sbjct: 313 PETR----------L-------------GRGGAGDFRTHPFFF 332

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 70.4 bits (173), Expect = 3e-14
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 29/142 (20%)

Query: 66  KDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG 125
            D++     K+ADFG+S Q   ++      +G   WMAPE    E +  Y ++ D ++  
Sbjct: 160 LDENAPVCAKVADFGLSQQSVHSV---SGLLGNFQWMAPETIGAEEE-SYTEKADTYSFA 215

Query: 126 ITAIELAELQPPMFDLHPMRALFLMSKSGFK----------PPALKD--KDRWSSTFHNF 173
           +    +   + P  +    +  F ++    +          PP L++  +  WS      
Sbjct: 216 MILYTILTGEGPFDEYSYGKIKF-INMIREEGLRPTIPEDCPPRLRNVIELCWS------ 268

Query: 174 VKIALTKNPKKRPTADKLLQVI 195
                  +PKKRP    +++ +
Sbjct: 269 ------GDPKKRPHFSYIVKEL 284

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 70.8 bits (174), Expect = 3e-14
 Identities = 34/154 (22%), Positives = 57/154 (37%), Gaps = 41/154 (26%)

Query: 65  LKDKDRCGDVKLADFGVSAQIT--------------ATINKRKSFIGTPYWMAPEVAAVE 110
           L  +++   V +ADFG++  +                   KR + +G PYWMAPE+    
Sbjct: 140 LVRENKN--VVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGR 197

Query: 111 RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFK--------PPALKD 162
               Y+++ D+++ GI   E+        D  P    F ++  GF         PP+   
Sbjct: 198 S---YDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFP 254

Query: 163 --KDRWSSTFHNFVKIALTKNPKKRPTADKLLQV 194
                               +P+KRP+  KL   
Sbjct: 255 ITVRCCD------------LDPEKRPSFVKLEHW 276

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 70.4 bits (173), Expect = 5e-14
 Identities = 33/154 (21%), Positives = 60/154 (38%), Gaps = 27/154 (17%)

Query: 65  LKDKDRCGDVKLADFGVSAQI-------TATINKRKSFIGTPYWMAPEV--AAVERKGGY 115
            +  ++   VK+ DF + + I         +  +  +  G+  +MAPEV  A  E    Y
Sbjct: 144 CEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIY 203

Query: 116 NQQCDIWAVG-ITAIELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDK--------- 163
           +++CD+W++G I  I L+   PP F                      L +          
Sbjct: 204 DKRCDLWSLGVILYILLSG-YPP-FVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFP 261

Query: 164 -DRW---SSTFHNFVKIALTKNPKKRPTADKLLQ 193
              W   S    + +   L ++ K+R +A ++LQ
Sbjct: 262 DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 70.0 bits (172), Expect = 7e-14
 Identities = 32/127 (25%), Positives = 65/127 (51%), Gaps = 12/127 (9%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           +   +VK+ DFG++ ++     ++K   GTP ++APEV  + +K G++ + D+W++G   
Sbjct: 175 NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV--LSKK-GHSFEVDVWSIGCIM 231

Query: 129 IELAELQPPMFDLHPMRALFLMSKSG-FKPPALKDKDRW-SSTFHNFVKIALTKNPKKRP 186
             L   +PP F+   ++  +L  K   +  P      +  +    + ++  L  +P  RP
Sbjct: 232 YTLLVGKPP-FETSCLKETYLRIKKNEYSIP------KHINPVAASLIQKMLQTDPTARP 284

Query: 187 TADKLLQ 193
           T ++LL 
Sbjct: 285 TINELLN 291

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 70.9 bits (173), Expect = 7e-14
 Identities = 27/148 (18%), Positives = 50/148 (33%), Gaps = 23/148 (15%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L+   +    K+ D G + ++         F+GT  ++APE+  +E+K  Y    D W+ 
Sbjct: 154 LQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGTLQYLAPEL--LEQK-KYTVTVDYWSF 209

Query: 125 GITAIELAELQPPMFDLHPMRALF--LMSKSGFKPPALKDKD---RWSSTF--------- 170
           G  A E      P             +  KS        D     ++SS           
Sbjct: 210 GTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGI 269

Query: 171 -----HNFVKIALTKNPKKRPTADKLLQ 193
                  +++  L  + ++R T  +   
Sbjct: 270 LAGKLERWLQCMLMWHQRQRGTDPQNPN 297

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 68.7 bits (169), Expect = 1e-13
 Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 12/127 (9%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
            R  ++K+ADFG++ Q+     K  +  GTP +++PE+    R   +  + D+W++G   
Sbjct: 146 TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEI--ATRS-AHGLESDVWSLGCMF 202

Query: 129 IELAELQPPMFDLHPMRALFLMSKSG-FKPPALKDKDRW-SSTFHNFVKIALTKNPKKRP 186
             L   +PP FD   ++          ++ P       + S    + +   L +NP  R 
Sbjct: 203 YTLLIGRPP-FDTDTVKNTLNKVVLADYEMP------SFLSIEAKDLIHQLLRRNPADRL 255

Query: 187 TADKLLQ 193
           +   +L 
Sbjct: 256 SLSSVLD 262

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 69.4 bits (170), Expect = 1e-13
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 19/131 (14%)

Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEV---AAVERKGGYNQQCDIWAVG-ITA 128
            ++L+DFG S  +     K +   GTP ++APE+   +  E   GY ++ D+WA G I  
Sbjct: 238 QIRLSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF 296

Query: 129 IELAELQPPMFDLHPMRALFLMSKSG---FKPPALKDKDRW---SSTFHNFVKIALTKNP 182
             LA   PP +    +  +  M   G   F  P       W   SST  + +   L  +P
Sbjct: 297 TLLAGS-PPFWHRRQIL-MLRMIMEGQYQFSSP------EWDDRSSTVKDLISRLLQVDP 348

Query: 183 KKRPTADKLLQ 193
           + R TA++ LQ
Sbjct: 349 EARLTAEQALQ 359

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 69.1 bits (169), Expect = 2e-13
 Identities = 27/157 (17%), Positives = 48/157 (30%), Gaps = 30/157 (19%)

Query: 66  KDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEV-----AAVERKGGYNQQCD 120
             +D     KL DFG + ++     +  S  GT  ++ P++        + +  Y    D
Sbjct: 147 IGEDGQSVYKLTDFGAARELEDD-EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVD 205

Query: 121 IWAVGITAIELAELQPPMFDLH-PMRALFLMSK-----------------------SGFK 156
           +W++G+T    A    P      P R   +M K                       SG  
Sbjct: 206 LWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDM 265

Query: 157 PPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           P +              +   L  + +K    D+   
Sbjct: 266 PVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 68.6 bits (168), Expect = 2e-13
 Identities = 26/157 (16%), Positives = 47/157 (29%), Gaps = 30/157 (19%)

Query: 66  KDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEV-----AAVERKGGYNQQCD 120
             +D     KL DFG + ++     +  S  GT  ++ P++        + +  Y    D
Sbjct: 147 IGEDGQSVYKLTDFGAARELEDD-EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVD 205

Query: 121 IWAVGITAIELAELQPPMFDLHPMRALF-LMSK-----------------------SGFK 156
           +W++G+T    A    P       R    +M K                       SG  
Sbjct: 206 LWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDM 265

Query: 157 PPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           P +              +   L  + +K    D+   
Sbjct: 266 PVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 68.4 bits (168), Expect = 2e-13
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 23/130 (17%)

Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG-ITAIEL 131
            +K+ DFG++ +I    N+ K+  GTP ++APE+  V  +     + D+W++G IT I L
Sbjct: 156 RIKIIDFGLAHKIDFG-NEFKNIFGTPEFVAPEI--VNYEP-LGLEADMWSIGVITYILL 211

Query: 132 AELQPPMFDLHPMRALFLMSKSG---FKPPALKD-----KDRWSSTFHNFVKIALTKNPK 183
           +    P F     +       +    F+     +     KD        F++  L K+PK
Sbjct: 212 SGA-SP-FLGDTKQETLANVSAVNYEFEDEYFSNTSALAKD--------FIRRLLVKDPK 261

Query: 184 KRPTADKLLQ 193
           KR T    LQ
Sbjct: 262 KRMTIQDSLQ 271

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 68.5 bits (168), Expect = 3e-13
 Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 23/130 (17%)

Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG-ITAIEL 131
            +KL DFG++ +I     + K+  GTP ++APE+  V  +     + D+W++G IT I L
Sbjct: 157 HIKLIDFGLAHEIEDG-VEFKNIFGTPEFVAPEI--VNYEP-LGLEADMWSIGVITYILL 212

Query: 132 AELQPPMFDLHPMRALFLMSKSG---FKPPALKD-----KDRWSSTFHNFVKIALTKNPK 183
           +    P F     +       +    F            KD        F++  L K  +
Sbjct: 213 SGA-SP-FLGDTKQETLANITAVSYDFDEEFFSQTSELAKD--------FIRKLLVKETR 262

Query: 184 KRPTADKLLQ 193
           KR T  + L+
Sbjct: 263 KRLTIQEALR 272

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 67.7 bits (166), Expect = 3e-13
 Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 23/131 (17%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG-ITAIE 130
             +KL DFG++ +I     + K+  GTP ++APE+  V  +     + D+W++G IT I 
Sbjct: 156 PHIKLIDFGLAHEIEDG-VEFKNIFGTPEFVAPEI--VNYEP-LGLEADMWSIGVITYIL 211

Query: 131 LAELQPPMFDLHPMRALFLMSKSG---FKPPALKD-----KDRWSSTFHNFVKIALTKNP 182
           L+    P F     +       S    F            KD        F++  L K  
Sbjct: 212 LSGA-SP-FLGDTKQETLANITSVSYDFDEEFFSHTSELAKD--------FIRKLLVKET 261

Query: 183 KKRPTADKLLQ 193
           +KR T  + L+
Sbjct: 262 RKRLTIQEALR 272

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 67.2 bits (165), Expect = 4e-13
 Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 24/139 (17%)

Query: 65  LKDKDRCG-DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWA 123
           L DK+     +KL DFG++ +I A  N+ K+  GTP ++APE+  V  +     + D+W+
Sbjct: 141 LLDKNVPNPRIKLIDFGIAHKIEAG-NEFKNIFGTPEFVAPEI--VNYE-PLGLEADMWS 196

Query: 124 VG-ITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKD-----KDRWSSTFHNFV 174
           +G IT I L+    P F     +       +    F      +     KD        F+
Sbjct: 197 IGVITYILLSGA-SP-FLGETKQETLTNISAVNYDFDEEYFSNTSELAKD--------FI 246

Query: 175 KIALTKNPKKRPTADKLLQ 193
           +  L K+PK+R T  + L+
Sbjct: 247 RRLLVKDPKRRMTIAQSLE 265

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 67.8 bits (166), Expect = 4e-13
 Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 23/130 (17%)

Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG-ITAIEL 131
            VK+ DFG++ ++       K    T  + APE+  V+R+       D+WA+G +  + L
Sbjct: 189 SVKIIDFGLATKLNPD-EIVKVTTATAEFAAPEI--VDREP-VGFYTDMWAIGVLGYVLL 244

Query: 132 AELQPPMFDLHPMRALFLMSKSG---FKPPALKD-----KDRWSSTFHNFVKIALTKNPK 183
           + L P  F            K     F   A        KD        F+K  L K P+
Sbjct: 245 SGLSP--FAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD--------FIKNLLQKEPR 294

Query: 184 KRPTADKLLQ 193
           KR T    L+
Sbjct: 295 KRLTVHDALE 304

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 66.5 bits (163), Expect = 6e-13
 Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 12/126 (9%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
              G++K+ADFG S    A   +R++  GT  ++ PE+  +E K  ++++ D+W  G+  
Sbjct: 148 GYKGELKIADFGWSVH--APSLRRRTMCGTLDYLPPEM--IEGK-THDEKVDLWCAGVLC 202

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRW-SSTFHNFVKIALTKNPKKRPT 187
            E     PP            +     K P       + S    + +   L  +P +R  
Sbjct: 203 YEFLVGMPPFDSPSHTETHRRIVNVDLKFP------PFLSDGSKDLISKLLRYHPPQRLP 256

Query: 188 ADKLLQ 193
              +++
Sbjct: 257 LKGVME 262

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 67.0 bits (164), Expect = 6e-13
 Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 14/127 (11%)

Query: 72  GDVKLADFGVSAQITATINKRKS-----FIGTPYWMAPEV------AAVERKGGYNQQCD 120
           G V + DFG+ +        R+        G    +APE+         E K  +++  D
Sbjct: 166 GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSD 225

Query: 121 IWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTK 180
           ++A+G    EL   + P         ++ M   G KP   +          + +      
Sbjct: 226 VFALGTIWYELHAREWPFKTQPAEAIIWQMGT-GMKPNLSQIG--MGKEISDILLFCWAF 282

Query: 181 NPKKRPT 187
             ++RPT
Sbjct: 283 EQEERPT 289

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 66.1 bits (162), Expect = 1e-12
 Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 36/161 (22%)

Query: 69  DRCGDVKLADFGVSAQITATINKRK--SFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           +    +++ DFG +  ++    + +  SF+GT  +++PE+  +  K    +  D+WA+G 
Sbjct: 164 NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL--LTEKS-ACKSSDLWALGC 220

Query: 127 TAIELAELQPPMFDLHPMRALF---LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPK 183
              +L    PP    +    +F   +  +  F P              + V+  L  +  
Sbjct: 221 IIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDF-PEKF------FPKARDLVEKLLVLDAT 272

Query: 184 KRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
           KR                    E   GY     + AHPFF+
Sbjct: 273 KRLGC-----------------EEMEGYG---PLKAHPFFE 293

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 65.8 bits (161), Expect = 1e-12
 Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 26/152 (17%)

Query: 69  DRCGDVKLADFGVSAQITATIN----KRKSFIGTPYWMAPEV---AAVERKGGYNQQCDI 121
            + G   +AD G++   + + N         +GT  +MAPEV             ++ DI
Sbjct: 147 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 206

Query: 122 WAVGITAIELA----------ELQPPMFDLHPMRALF-----LMSKSGFKPPALKDKDRW 166
           WA G+   E+A          + +PP +D+ P    F     ++     +P  + ++   
Sbjct: 207 WAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPN-IPNRWFS 265

Query: 167 SSTFHNFVKIAL---TKNPKKRPTADKLLQVI 195
             T  +  K+      +NP  R TA ++ + +
Sbjct: 266 DPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 66.4 bits (162), Expect = 2e-12
 Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 35/160 (21%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G V+++D G++   +    K  + +GT  +MAPEV  +++   Y+   D +++G   
Sbjct: 326 DEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEV--LQKGVAYDSSADWFSLGCML 381

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTF----HNFVKIALTKNPKK 184
            +L     P F  H  +    + +       L        +F     + ++  L ++  +
Sbjct: 382 FKLLRGHSP-FRQHKTKDKHEIDRM-----TLTMAVELPDSFSPELRSLLEGLLQRDVNR 435

Query: 185 RPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
           R          L    R A            ++   PFF+
Sbjct: 436 R----------LGCLGRGAQ-----------EVKESPFFR 454

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 65.8 bits (160), Expect = 2e-12
 Identities = 25/154 (16%), Positives = 43/154 (27%), Gaps = 18/154 (11%)

Query: 45  DLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITA--TINKRKSFIGTPYWM 102
           D+ P     L +          + D    + L D G S  +          +   T  + 
Sbjct: 197 DIKP-DNFILGNGF---LEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQ 252

Query: 103 APEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD 162
             E+  +  K  +N Q D + V  T   +                    +  F+   L  
Sbjct: 253 CVEM--LSNKP-WNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKP---EGLFR--RLPH 304

Query: 163 KDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL 196
            D W+     F  + L         +  LL+  L
Sbjct: 305 LDMWN----EFFHVMLNIPDCHHLPSLDLLRQKL 334

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 65.0 bits (159), Expect = 3e-12
 Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 10/115 (8%)

Query: 74  VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE 133
           +K+ DFG +  I   +    +  G+  WMAPEV        Y+++CD+++ GI   E+  
Sbjct: 145 LKICDFGTACDIQTHM---TNNKGSAAWMAPEVF---EGSNYSEKCDVFSWGIILWEVIT 198

Query: 134 LQPPMFDLH-PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT 187
            + P  ++  P   +     +G +PP +K+         + +    +K+P +RP+
Sbjct: 199 RRKPFDEIGGPAFRIMWAVHNGTRPPLIKN---LPKPIESLMTRCWSKDPSQRPS 250

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 65.6 bits (160), Expect = 4e-12
 Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 23/130 (17%)

Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG-ITAIEL 131
           ++KL DFG++A +       K   GT  + APEVA            D+W+VG ++ I L
Sbjct: 295 ELKLIDFGLTAHLDPK-QSVKVTTGTAEFAAPEVA---EGKPVGYYTDMWSVGVLSYILL 350

Query: 132 AELQPPMFDLHPMRALFLMSKSG---FKPPALKD-----KDRWSSTFHNFVKIALTKNPK 183
           + L P  F            KS        A        KD        F++  L  +P 
Sbjct: 351 SGLSP--FGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD--------FIRKLLLADPN 400

Query: 184 KRPTADKLLQ 193
            R T  + L+
Sbjct: 401 TRMTIHQALE 410

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 64.6 bits (158), Expect = 4e-12
 Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 23/130 (17%)

Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG-ITAIEL 131
            +K+ +FG + Q+    +  +     P + APEV   +     +   D+W++G +  + L
Sbjct: 142 TIKIIEFGQARQLKPG-DNFRLLFTAPEYYAPEV--HQHDV-VSTATDMWSLGTLVYVLL 197

Query: 132 AELQPPMFDLHPMRALFLMSKSG---FKPPALKD-----KDRWSSTFHNFVKIALTKNPK 183
           + + P  F     + +     +    F   A K+      D        FV   L K  K
Sbjct: 198 SGINP--FLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD--------FVDRLLVKERK 247

Query: 184 KRPTADKLLQ 193
            R TA + LQ
Sbjct: 248 SRMTASEALQ 257

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 64.6 bits (158), Expect = 5e-12
 Identities = 36/161 (22%), Positives = 59/161 (36%), Gaps = 32/161 (19%)

Query: 69  DRCGDVKLADFGVS-AQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT 127
           D  G V L DFG+S   +     +   F GT  +MAP++      G +++  D W++G+ 
Sbjct: 193 DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSG-HDKAVDWWSLGVL 251

Query: 128 AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTF----HNFVKIALTKNPK 183
             EL     P        +   +S+       LK +  +         + ++  L K+PK
Sbjct: 252 MYELLTGASPFTVDGEKNSQAEISRR-----ILKSEPPYPQEMSALAKDLIQRLLMKDPK 306

Query: 184 KRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
           KR          L             G     +I  H FF+
Sbjct: 307 KR----------L-----------GCGPRDADEIKEHLFFQ 326

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 63.8 bits (156), Expect = 6e-12
 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 7/127 (5%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYN-QQCDIWAVGIT 127
              G +K+ADFGVS +   +     + +GTP +MAPE  +  RK  ++ +  D+WA+G+T
Sbjct: 171 GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRK-IFSGKALDVWAMGVT 229

Query: 128 AIELAELQPPMFDLHPMRALFLMSKSG-FKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
                  Q P F    +  L    KS   + P   D+   +    + +   L KNP+ R 
Sbjct: 230 LYCFVFGQCP-FMDERIMCLHSKIKSQALEFP---DQPDIAEDLKDLITRMLDKNPESRI 285

Query: 187 TADKLLQ 193
              ++  
Sbjct: 286 VVPEIKL 292

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 64.3 bits (157), Expect = 6e-12
 Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 23/130 (17%)

Query: 73  DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG-ITAIEL 131
            +K+ DFG++ +      K K   GTP ++APEV  V      +   D+W+VG I  + L
Sbjct: 227 QIKIIDFGLARRYKPR-EKLKVNFGTPEFLAPEV--VNYDF-VSFPTDMWSVGVIAYMLL 282

Query: 132 AELQPPMFDLHPMRALFLMSKSG---FKPPALKD-----KDRWSSTFHNFVKIALTKNPK 183
           + L  P F             +     +    +D     K+        F+   L K   
Sbjct: 283 SGL-SP-FLGDNDAETLNNILACRWDLEDEEFQDISEEAKE--------FISKLLIKEKS 332

Query: 184 KRPTADKLLQ 193
            R +A + L+
Sbjct: 333 WRISASEALK 342

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 38/159 (23%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++        +  GTP  +APE+  +  KG YN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTW---TLCGTPEALAPEI--ILSKG-YNKAVDWWALGVLI 228

Query: 129 IELAELQPPMFDLHPMRALF---LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+A   PP F   P++ ++   +  K  F P         SS   + ++  L  +  KR
Sbjct: 229 YEMAAGYPPFFADQPIQ-IYEKIVSGKVRF-PSHF------SSDLKDLLRNLLQVDLTKR 280

Query: 186 PTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
               K                   G N   DI  H +F 
Sbjct: 281 FGNLK------------------NGVN---DIKNHKWFA 298

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 62.2 bits (152), Expect = 3e-11
 Identities = 48/179 (26%), Positives = 70/179 (39%), Gaps = 41/179 (22%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +KL DFG+S +      K  SF GT  +MAPEV  V R+G + Q  D W+ G+  
Sbjct: 160 DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV--VNRRG-HTQSADWWSFGVLM 216

Query: 129 IELAELQPPMFDLHPMRALF---LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+     P F     +      L +K G  P  L      S    + +++   +NP  R
Sbjct: 217 FEMLTGTLP-FQGKDRKETMTMILKAKLGM-PQFL------SPEAQSLLRMLFKRNPANR 268

Query: 186 PTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKY-DMSKRVAIELLQKVSNPP 243
             A                     G +   +I  H FF   D +K     L ++  +PP
Sbjct: 269 LGA---------------------GPDGVEEIKRHSFFSTIDWNK-----LYRREIHPP 301

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 61.3 bits (149), Expect = 5e-11
 Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 22/142 (15%)

Query: 69  DRCGDVKLADFGVS--AQITATINKRKSFIGTPYWMAPEVA--AVERKGGYNQQCDIWAV 124
                  +ADFG++   +   +       +GT  +MAPEV   A+  +     + D++A+
Sbjct: 165 KNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAM 224

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKP---------------PALKDKDRWSST 169
           G+   ELA              L    + G  P               P L+D  +  + 
Sbjct: 225 GLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAG 284

Query: 170 FHNFVKIALT---KNPKKRPTA 188
                +        + + R +A
Sbjct: 285 MAMLCETIEECWDHDAEARLSA 306

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 61.0 bits (149), Expect = 7e-11
 Identities = 42/179 (23%), Positives = 67/179 (37%), Gaps = 41/179 (22%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           +  G VKL DFG+  +         +F GT  +MAPE+     + G+N+  D W++G   
Sbjct: 155 NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEIL---MRSGHNRAVDWWSLGALM 211

Query: 129 IELAELQPPMFDLHPMRALF---LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            ++    PP F     +      L  K    PP L      +    + +K  L +N   R
Sbjct: 212 YDMLTGAPP-FTGENRKKTIDKILKCKLNL-PPYL------TQEARDLLKKLLKRNAASR 263

Query: 186 PTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKY-DMSKRVAIELLQKVSNPP 243
                     L             G     ++ AHPFF++ +  +     LL +   PP
Sbjct: 264 ----------L-----------GAGPGDAGEVQAHPFFRHINWEE-----LLARKVEPP 296

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 60.9 bits (148), Expect = 8e-11
 Identities = 26/152 (17%), Positives = 54/152 (35%), Gaps = 26/152 (17%)

Query: 69  DRCGDVKLADFGVSAQITATINKR----KSFIGTPYWMAPEV---AAVERKGGYNQQCDI 121
            + G   +AD G++ +  +  N+      + +GT  +M PEV   +            D+
Sbjct: 176 KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADM 235

Query: 122 WAVGI----------TAIELAELQPPMFDLHPMRALF-----LMSKSGFKPPALKDKDRW 166
           ++ G+          +   + E Q P  DL P    +     ++     +P    ++   
Sbjct: 236 YSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPS-FPNRWSS 294

Query: 167 SSTFHNFVKIA---LTKNPKKRPTADKLLQVI 195
                   K+       NP  R TA ++ + +
Sbjct: 295 DECLRQMGKLMTECWAHNPASRLTALRVKKTL 326

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 60.6 bits (148), Expect = 1e-10
 Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 38/159 (23%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG +  +        +  GTP ++APEV  V  K  YN+  D W+ GI  
Sbjct: 140 DKNGHIKITDFGFAKYVPDVTY---TLCGTPDYIAPEV--VSTKP-YNKSIDWWSFGILI 193

Query: 129 IELAELQPPMFDLHPMRALF---LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+     P +D + M+  +   L ++  F PP        +    + +   +T++  +R
Sbjct: 194 YEMLAGYTPFYDSNTMK-TYEKILNAELRF-PPFF------NEDVKDLLSRLITRDLSQR 245

Query: 186 PTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
                                     N   D+  HP+FK
Sbjct: 246 LGN---------------------LQNGTEDVKNHPWFK 263

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 60.6 bits (147), Expect = 1e-10
 Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 33/160 (20%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G+V+++D G++ ++ A   K K + GTP +MAPE+        Y+   D +A+G+T 
Sbjct: 323 DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL---LGEEYDFSVDYFALGVTL 379

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTF----HNFVKIALTKNPKK 184
            E+   + P            + +       L+    +   F     +F +  L K+P+K
Sbjct: 380 YEMIAARGPFRARGEKVENKELKQR-----VLEQAVTYPDKFSPASKDFCEALLQKDPEK 434

Query: 185 RPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
           R                     R G  +    +  HP F+
Sbjct: 435 RLGF------------------RDGSCD---GLRTHPLFR 453

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 60.1 bits (146), Expect = 2e-10
 Identities = 40/158 (25%), Positives = 61/158 (38%), Gaps = 33/158 (20%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG+  +        K+F GTP ++APEV        Y +  D W +G+  
Sbjct: 283 DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL---EDNDYGRAVDWWGLGVVM 339

Query: 129 IELAELQPPMF--DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
            E+   + P +  D   +  L LM +  F P  L           + +   L K+PK+R 
Sbjct: 340 YEMMCGRLPFYNQDHEKLFELILMEEIRF-PRTL------GPEAKSLLSGLLKKDPKQR- 391

Query: 187 TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
                    L            GG     +I  H FF 
Sbjct: 392 ---------L-----------GGGSEDAKEIMQHRFFA 409

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 29/152 (19%), Positives = 60/152 (39%), Gaps = 26/152 (17%)

Query: 69  DRCGDVKLADFGVSAQITATIN----KRKSFIGTPYWMAPEV---AAVERKGGYNQQCDI 121
            + G   +AD G++ +  +  +         +GT  +MAPEV   +   +     ++ DI
Sbjct: 181 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 240

Query: 122 WAVGITAIELA----------ELQPPMFDLHPMRALF-----LMSKSGFKPPALKDKDRW 166
           +A+G+   E+A          + Q P +DL P          ++ +   +P  + ++ + 
Sbjct: 241 YAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPN-IPNRWQS 299

Query: 167 SSTFHNFVKIA---LTKNPKKRPTADKLLQVI 195
                   KI       N   R TA ++ + +
Sbjct: 300 CEALRVMAKIMRECWYANGAARLTALRIKKTL 331

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 35/159 (22%), Positives = 59/159 (37%), Gaps = 36/159 (22%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G + L DFG+  +     +   +F GTP ++APEV     K  Y++  D W +G   
Sbjct: 173 DSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVL---HKQPYDRTVDWWCLGAVL 229

Query: 129 IELAELQPPMFDLHPMRALF---LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+    PP F       ++   L        P +      +++  + ++  L K+  KR
Sbjct: 230 YEMLYGLPP-FYSRNTAEMYDNILNKPLQL-KPNI------TNSARHLLEGLLQKDRTKR 281

Query: 186 PTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
                L                 G  +   +I +H FF 
Sbjct: 282 -----L-----------------GAKDDFMEIKSHVFFS 298

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 59.2 bits (144), Expect = 3e-10
 Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 35/159 (22%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG+  +  +     K+F GTP ++APEV  +E    Y +  D W +G+  
Sbjct: 139 DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV--LEDND-YGRAVDWWGLGVVM 195

Query: 129 IELAELQPPMFDLHPMRALF---LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   + P F       LF   LM +  F P  L      S    + +   L K+PK+R
Sbjct: 196 YEMMCGRLP-FYNQDHERLFELILMEEIRF-PRTL------SPEAKSLLAGLLKKDPKQR 247

Query: 186 PTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
                                   G +   ++  H FF 
Sbjct: 248 LGG---------------------GPSDAKEVMEHRFFL 265

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 59.7 bits (144), Expect = 4e-10
 Identities = 47/179 (26%), Positives = 68/179 (37%), Gaps = 41/179 (22%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +K+ADFG+  +        K+F GTP ++APE+        Y +  D WA G+  
Sbjct: 476 DSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEII---AYQPYGKSVDWWAFGVLL 532

Query: 129 IELAELQPPMFDLHPMRALF---LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   Q P F+      LF   +     + P ++      S       K  +TK+P KR
Sbjct: 533 YEMLAGQAP-FEGEDEDELFQSIMEHNVAY-PKSM------SKEAVAICKGLMTKHPGKR 584

Query: 186 PTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKY-DMSKRVAIELLQKVSNPP 243
                                   G   + DI  H FF+Y D  K     L +K   PP
Sbjct: 585 LGC---------------------GPEGERDIKEHAFFRYIDWEK-----LERKEIQPP 617

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 59.5 bits (144), Expect = 4e-10
 Identities = 31/141 (21%), Positives = 53/141 (37%), Gaps = 24/141 (17%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
             +KL D G  ++I +         GTP + APE+     + G     DI+ VG T   L
Sbjct: 218 EQLKLIDLGAVSRINSF----GYLYGTPGFQAPEIV----RTGPTVATDIYTVGRTLAAL 269

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT---- 187
               P   +   +  L         P        + S +   ++ A+  +P++R T    
Sbjct: 270 TLDLPT-RNGRYVDGL---------PEDDPVLKTYDS-YGRLLRRAIDPDPRQRFTTAEE 318

Query: 188 -ADKLLQVILIHRARVAAVER 207
            + +L  V+    A+   V R
Sbjct: 319 MSAQLTGVLREVVAQDTGVPR 339

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 58.4 bits (142), Expect = 5e-10
 Identities = 40/159 (25%), Positives = 58/159 (36%), Gaps = 34/159 (21%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G  KLADFG+  +         +F GTP ++APE+    ++  Y    D WA+G+  
Sbjct: 158 DHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEIL---QEMLYGPAVDWWAMGVLL 214

Query: 129 IELAELQPPMFDLHPMRALF---LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+     P F+      LF   L  +  + P  L             +K  +TKNP  R
Sbjct: 215 YEMLCGHAP-FEAENEDDLFEAILNDEVVY-PTWL------HEDATGILKSFMTKNPTMR 266

Query: 186 PTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
             +                         +  I  HPFFK
Sbjct: 267 LGS--------------------LTQGGEHAILRHPFFK 285

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 58.3 bits (141), Expect = 9e-10
 Identities = 36/180 (20%), Positives = 61/180 (33%), Gaps = 40/180 (22%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G ++++D G++  +       K  +GT  +MAPEV    +   Y    D WA+G   
Sbjct: 320 DDHGHIRISDLGLAVHVPEG-QTIKGRVGTVGYMAPEVV---KNERYTFSPDWWALGCLL 375

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTF----HNFVKIALTKNPKK 184
            E+   Q P            + +        +  + +S  F     +     L K+P +
Sbjct: 376 YEMIAGQSPFQQRKKKIKREEVERL-----VKEVPEEYSERFSPQARSLCSQLLCKDPAE 430

Query: 185 RPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKY-DMSKRVAIELLQKVSNPP 243
           R          L  R   A            ++  HP FK  +  +     L   +  PP
Sbjct: 431 R----------LGCRGGSAR-----------EVKEHPLFKKLNFKR-----LGAGMLEPP 464

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 57.6 bits (140), Expect = 1e-09
 Identities = 39/159 (24%), Positives = 57/159 (35%), Gaps = 39/159 (24%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ADFG+  +      K  +F GTP ++APE+        YN   D W+ G+  
Sbjct: 152 DKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEIL---LGQKYNHSVDWWSFGVLL 208

Query: 129 IELAELQPPMFDLHPMRALF---LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   Q P F       LF    M    + P  L           + +     + P+KR
Sbjct: 209 YEMLIGQSP-FHGQDEEELFHSIRMDNPFY-PRWL------EKEAKDLLVKLFVREPEKR 260

Query: 186 PTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
                     L             G     DI  HP F+
Sbjct: 261 ----------L-------------GVRG--DIRQHPLFR 274

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 47/179 (26%), Positives = 68/179 (37%), Gaps = 41/179 (22%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +K+ADFG+  +        K+F GTP ++APE+        Y +  D WA G+  
Sbjct: 155 DSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEII---AYQPYGKSVDWWAFGVLL 211

Query: 129 IELAELQPPMFDLHPMRALF---LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
            E+   Q P F+      LF   +     + P ++      S       K  +TK+P KR
Sbjct: 212 YEMLAGQAP-FEGEDEDELFQSIMEHNVAY-PKSM------SKEAVAICKGLMTKHPGKR 263

Query: 186 PTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKY-DMSKRVAIELLQKVSNPP 243
                                   G   + DI  H FF+Y D  K     L +K   PP
Sbjct: 264 LGC---------------------GPEGERDIKEHAFFRYIDWEK-----LERKEIQPP 296

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 55.4 bits (134), Expect = 5e-09
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 45/220 (20%)

Query: 69  DRCGDVKLADFGVSAQITATINKR--KSFIGTPYWMAPEVAAVERKGGYN-QQCDIWAVG 125
           D   ++K++DFG++        +R      GT  ++APE+  ++R+  ++ +  D+W+ G
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL--LKRR-EFHAEPVDVWSCG 195

Query: 126 IT--AIELAELQPPMFD--LHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKN 181
           I   A+ LA   P  +D      +      +            +  S     +   L +N
Sbjct: 196 IVLTAM-LAGELP--WDQPSDSCQEYSDWKEKKTYLN---PWKKIDSAPLALLHKILVEN 249

Query: 182 PKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM---SKRVAIELLQK 238
           P  R T                            DI    ++   +   +KR  +     
Sbjct: 250 PSARITIP--------------------------DIKKDRWYNKPLKKGAKRPRVTSGGV 283

Query: 239 VSNPPTTYTDLEPDDDGEIPNVPQRIQSRLLTARNNHARN 278
             +P      ++ + D    N   R      +  ++H  +
Sbjct: 284 SESPSGFSKHIQSNLDFSPVNSASRTPGSGWSKEHHHHHH 323

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 55.0 bits (133), Expect = 7e-09
 Identities = 28/139 (20%), Positives = 43/139 (30%), Gaps = 42/139 (30%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
              K     +KL DFG                      A E         Y++ CD+W++
Sbjct: 150 YTSKRPNAILKLTDFG---------------------FAKET----TGEKYDKSCDMWSL 184

Query: 125 G-ITAIELAELQPPMFDLHPMR---ALFLMSKSG---FKPPALKDKDRW---SSTFHNFV 174
           G I  I L    PP +  H +     +    + G   F  P       W   S      +
Sbjct: 185 GVIMYILLCG-YPPFYSNHGLAISPGMKTRIRMGQYEFPNPE------WSEVSEEVKMLI 237

Query: 175 KIALTKNPKKRPTADKLLQ 193
           +  L   P +R T  + + 
Sbjct: 238 RNLLKTEPTQRMTITEFMN 256

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 54.5 bits (131), Expect = 1e-08
 Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 39/156 (25%)

Query: 69  DRCGDVKLADFGVSAQITATINKR--------KSFIGTPYWMAPEVA----AVERKGGYN 116
              G   ++DFG+S ++T     R         S +GT  +MAPEV      +       
Sbjct: 154 KNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESAL 213

Query: 117 QQCDIWAVGITAIELA-------------ELQPPMFDLHPMRALF-----LMSKSGFKPP 158
           +Q D++A+G+   E+              E Q            F     L+S+   +P 
Sbjct: 214 KQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPK 273

Query: 159 ALKDKDRWSSTFHNFVKIALT------KNPKKRPTA 188
                + W         +  T      ++ + R TA
Sbjct: 274 F---PEAWKENSLAVRSLKETIEDCWDQDAEARLTA 306

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 41/168 (24%), Positives = 62/168 (36%), Gaps = 43/168 (25%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +KL D+G+  +     +   +F GTP ++APE+    R   Y    D WA+G+  
Sbjct: 144 DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL---RGEDYGFSVDWWALGVLM 200

Query: 129 IELAELQPPMFDLHPMRA---------LF---LMSKSGFKPPALKDKDRWSSTFHNFVKI 176
            E+   + P FD+              LF   L  +    P +L      S    + +K 
Sbjct: 201 FEMMAGRSP-FDIVGSSDNPDQNTEDYLFQVILEKQIRI-PRSL------SVKAASVLKS 252

Query: 177 ALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
            L K+PK+R                              DI  HPFF+
Sbjct: 253 FLNKDPKERLGC--------------------HPQTGFADIQGHPFFR 280

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 41/168 (24%), Positives = 62/168 (36%), Gaps = 43/168 (25%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +KL D+G+  +     +   +F GTP ++APE+    R   Y    D WA+G+  
Sbjct: 187 DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL---RGEDYGFSVDWWALGVLM 243

Query: 129 IELAELQPPMFDLHPMRA---------LF---LMSKSGFKPPALKDKDRWSSTFHNFVKI 176
            E+   + P FD+              LF   L  +    P +L      S    + +K 
Sbjct: 244 FEMMAGRSP-FDIVGSSDNPDQNTEDYLFQVILEKQIRI-PRSL------SVKAASVLKS 295

Query: 177 ALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
            L K+PK+R                              DI  HPFF+
Sbjct: 296 FLNKDPKERLGC--------------------HPQTGFADIQGHPFFR 323

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 53.1 bits (128), Expect = 3e-08
 Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 12/127 (9%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D   ++K+ADFG S + T    K  +F G P + APE+   + K     + D+W++G+  
Sbjct: 148 DADMNIKIADFGFSNEFTVG-GKLDAFCGAPPYAAPEL--FQGKKYDGPEVDVWSLGVIL 204

Query: 129 IELAELQPPMFDLHPMRALFLMSKSG-FKPPALKDKDRWSSTFH-NFVKIALTKNPKKRP 186
             L     P FD   ++ L      G ++ P       + ST   N +K  L  NP KR 
Sbjct: 205 YTLVSGSLP-FDGQNLKELRERVLRGKYRIP------FYMSTDCENLLKRFLVLNPIKRG 257

Query: 187 TADKLLQ 193
           T +++++
Sbjct: 258 TLEQIMK 264

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 52.7 bits (127), Expect = 4e-08
 Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 18/132 (13%)

Query: 69  DRCGDVKLADFGVSAQITATINKR--KSFIGTPYWMAPEVAAVERKGGYN-QQCDIWAVG 125
              G +K++  GV+  +         ++  G+P +  PE+A       ++  + DIW+ G
Sbjct: 143 TTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLD--TFSGFKVDIWSAG 200

Query: 126 IT--AIELAELQPPMFDLHPMRALFLMSKSG-FKPPALKDKDRW-SSTFHNFVKIALTKN 181
           +T   I    L P  F+   +  LF     G +  P              + +K  L   
Sbjct: 201 VTLYNI-TTGLYP--FEGDNIYKLFENIGKGSYAIP------GDCGPPLSDLLKGMLEYE 251

Query: 182 PKKRPTADKLLQ 193
           P KR +  ++ Q
Sbjct: 252 PAKRFSIRQIRQ 263

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 52.2 bits (126), Expect = 5e-08
 Identities = 27/132 (20%), Positives = 54/132 (40%), Gaps = 16/132 (12%)

Query: 69  DRCGDVKLADFGVSAQITATINKR--KSFIGTPYWMAPEVAAVERKGGYN-QQCDIWAVG 125
           D   ++K++DFG++        +R      GT  ++APE+  ++R+  ++ +  D+W+ G
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL--LKRR-EFHAEPVDVWSCG 195

Query: 126 IT--AIELAELQPPMFD--LHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKN 181
           I   A+ LA   P  +D      +      +            +  S     +   L +N
Sbjct: 196 IVLTAM-LAGELP--WDQPSDSCQEYSDWKEKKTYLN---PWKKIDSAPLALLHKILVEN 249

Query: 182 PKKRPTADKLLQ 193
           P  R T   + +
Sbjct: 250 PSARITIPDIKK 261

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 51.9 bits (125), Expect = 9e-08
 Identities = 43/221 (19%), Positives = 73/221 (33%), Gaps = 59/221 (26%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT- 127
           D   +VK+ADFG+S  +T   N  K+  G+P + APEV  +  K     + D+W+ GI  
Sbjct: 142 DDNLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEV--INGKLYAGPEVDVWSCGIVL 198

Query: 128 -AIELAELQPPMFDLHPMRALFLMSKSG-FKPPALKDKDRW-SSTFHNFVKIALTKNPKK 184
             + L    P  FD   +  LF    S  +  P       + S    + ++  +  +P +
Sbjct: 199 YVM-LVGRLP--FDDEFIPNLFKKVNSCVYVMP------DFLSPGAQSLIRRMIVADPMQ 249

Query: 185 RPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPPT 244
           R T                            +I   P+F  ++   +           P 
Sbjct: 250 RITIQ--------------------------EIRRDPWFNVNLPDYL----------RPM 273

Query: 245 TYTDLEPDDDGEIPNV-------PQRIQSRLLTARNNHARN 278
                   D   +  +          I   L +  NN  + 
Sbjct: 274 EEVQGSYADSRIVSKLGEAMGFSEDYIVEALRSDENNEVKE 314

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 16/129 (12%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT- 127
           D   + K+ADFG+S  ++      ++  G+P + APEV  +  +     + DIW+ G+  
Sbjct: 145 DAHMNAKIADFGLSNMMSDG-EFLRTSCGSPNYAAPEV--ISGRLYAGPEVDIWSCGVIL 201

Query: 128 -AIELAELQPPMFDLHPMRALFLMSKSG-FKPPALKDKDRW-SSTFHNFVKIALTKNPKK 184
            A+ L    P  FD   +  LF   + G F  P       + + +    +   L  +P K
Sbjct: 202 YAL-LCGTLP--FDDEHVPTLFKKIRGGVFYIP------EYLNRSVATLLMHMLQVDPLK 252

Query: 185 RPTADKLLQ 193
           R T   + +
Sbjct: 253 RATIKDIRE 261

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 42/242 (17%), Positives = 76/242 (31%), Gaps = 40/242 (16%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYN-QQCDIWA 123
           L D      +K+ DFG S       ++ KS +GTP ++APEV  + R+  Y+ +  D+W+
Sbjct: 148 LLDGSPAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEV--LLRQ-EYDGKIADVWS 203

Query: 124 VGITAIELAELQPPMFDLHPM---RALFLMSKSG-FKPPALKDKDRWSSTFHNFVKIALT 179
            G+T   +     P  D       R       S  +  P   D  R S    + +     
Sbjct: 204 CGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP---DDIRISPECCHLISRIFV 260

Query: 180 KNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKV 239
            +P  R +                            +I  H +F  ++   +  E     
Sbjct: 261 ADPATRISIP--------------------------EIKTHSWFLKNLPADLMNESNTGS 294

Query: 240 SNPPTTYTDLEPDDDGEIPNVPQRIQSRLLTARNNHARNPNIDESEVFSLPDVSAPWNST 299
                       D   +I  + +     +     +     N+D  +     D  +  +  
Sbjct: 295 QFQEPEQPMQSLDTIMQI--ISEATIPAVRNRCLDDFMTDNLDLDDDMDDFDSESEIDID 352

Query: 300 LS 301
            S
Sbjct: 353 SS 354

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 26/131 (19%), Positives = 43/131 (32%), Gaps = 21/131 (16%)

Query: 72  GDVKLADFGV-----SAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
               L DFG+       ++T       + +GT Y+MAPE      +     + DI+A+  
Sbjct: 171 DFAYLVDFGIASATTDEKLTQL----GNTVGTLYYMAPERF---SESHATYRADIYALTC 223

Query: 127 TAIELAELQPPMFDLHPMRALF--LMSKSGFKPPALKDKDRW-SSTFHNFVKIALTKNPK 183
              E     PP +    +  +   +        P            F   +   + KNP+
Sbjct: 224 VLYECLTGSPP-YQGDQLSVMGAHINQ----AIPRPSTVRPGIPVAFDAVIARGMAKNPE 278

Query: 184 KR-PTADKLLQ 193
            R  T   L  
Sbjct: 279 DRYVTCGDLSA 289

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 49.5 bits (119), Expect = 4e-07
 Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 9/126 (7%)

Query: 72  GDVKLADFG-VSAQITATINKRKSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGITAI 129
             +K+ DFG   A    ++ +    +GT  + +PE A    KG   ++  DI+++GI   
Sbjct: 148 KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA----KGEATDECTDIYSIGIVLY 203

Query: 130 ELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRW-SSTFHNFVKIALTKNPKKRP-T 187
           E+   +PP F+     ++ +       P    D  +    +  N +  A  K+   R  T
Sbjct: 204 EMLVGEPP-FNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKT 262

Query: 188 ADKLLQ 193
             ++  
Sbjct: 263 IQEMKD 268

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 48.6 bits (116), Expect = 9e-07
 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 16/126 (12%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
                +KL DFG +A +        +F GT  + APEV  +        + ++W++G+T 
Sbjct: 164 AEDFTIKLIDFGSAAYLERG-KLFYTFCGTIEYCAPEV--LMGNPYRGPELEMWSLGVTL 220

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRW-SSTFHNFVKIALTKNPKKRPT 187
             L      +F+ +P   L    ++   PP         S    + V   L   P++R T
Sbjct: 221 YTL------VFEENPFCELEETVEAAIHPP------YLVSKELMSLVSGLLQPVPERRTT 268

Query: 188 ADKLLQ 193
            +KL+ 
Sbjct: 269 LEKLVT 274

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 28/138 (20%)

Query: 72  GDVKLADFGV---SAQITATINKRKSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGIT 127
             VK+ DFG+    A    ++ +  + IGT  +++PE A    +G   + + D++++G  
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA----RGDSVDARSDVYSLGCV 208

Query: 128 AIELAELQPPMFD--------LHPMRALFLMSKSGFKPPALKDKDRW-SSTFHNFVKIAL 178
             E+   +PP F            +R           P     +    S+     V  AL
Sbjct: 209 LYEVLTGEPP-FTGDSPVSVAYQHVRE---------DPIPPSARHEGLSADLDAVVLKAL 258

Query: 179 TKNPKKRP-TADKLLQVI 195
            KNP+ R  TA ++   +
Sbjct: 259 AKNPENRYQTAAEMRADL 276

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 47.1 bits (112), Expect = 4e-06
 Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 16/129 (12%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT- 127
           D   + K+ADFG+S  ++      ++  G+P + APEV  +  +     + DIW+ G+  
Sbjct: 150 DAHMNAKIADFGLSNMMSDG-EFLRTSCGSPNYAAPEV--ISGRLYAGPEVDIWSSGVIL 206

Query: 128 -AIELAELQPPMFDLHPMRALFLMSKSG-FKPPALKDKDRW-SSTFHNFVKIALTKNPKK 184
            A+ L    P  FD   +  LF     G F  P      ++ + +  + +K  L  +P K
Sbjct: 207 YAL-LCGTLP--FDDDHVPTLFKKICDGIFYTP------QYLNPSVISLLKHMLQVDPMK 257

Query: 185 RPTADKLLQ 193
           R T   + +
Sbjct: 258 RATIKDIRE 266

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 28/135 (20%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYN-QQCDIWA 123
           L D +R G++KL DFG  A +  T      F GT  +  PE     R   Y+ +   +W+
Sbjct: 181 LIDLNR-GELKLIDFGSGALLKDT--VYTDFDGTRVYSPPE---WIRYHRYHGRSAAVWS 234

Query: 124 VGITAIELAELQPPMFDL----HPMRALFLMSKSGFKPPALKDKDRW-SSTFHNFVKIAL 178
           +GI           ++D+     P      + +            +  SS   + ++  L
Sbjct: 235 LGIL----------LYDMVCGDIPFEHDEEIIRGQVFFR------QRVSSECQHLIRWCL 278

Query: 179 TKNPKKRPTADKLLQ 193
              P  RPT +++  
Sbjct: 279 ALRPSDRPTFEEIQN 293

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 47/269 (17%), Positives = 84/269 (31%), Gaps = 78/269 (28%)

Query: 71  CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEV--AAVERKGGYNQQCDIWAVG-IT 127
              +KL DFG SA+         S+I + Y+ APE+   A +    Y    D+W+ G + 
Sbjct: 193 TAVLKLCDFG-SAKQLVRGEPNVSYICSRYYRAPELIFGATD----YTSSIDVWSAGCVL 247

Query: 128 AIELAELQPPMF----------------------DLHPMRALFLMSKSGFKPPALKDKDR 165
           A EL   QP +F                       +  M   +    + FK P +K    
Sbjct: 248 A-ELLLGQP-IFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY----TEFKFPQIKAHP- 300

Query: 166 WSSTFH--------NFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDI 217
           W+  F               L   P  R T  +                           
Sbjct: 301 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC------------------------- 335

Query: 218 WAHPFFK--YDMSKRVAIELLQKVSNPPTTYTDLEPDDDGEIPN--VPQRIQSRLLTARN 273
            AH FF    D + ++      + +     +T  E   +  +    +P   + +   +  
Sbjct: 336 -AHSFFDELRDPNVKLPNG---RDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTP 391

Query: 274 NHARNPNIDESEVFSLPDVSAPWNSTLST 302
            +A   +   +      + +A  +++ ST
Sbjct: 392 TNATAASDANTGDRGQTNNAASASASNST 420

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 28/172 (16%), Positives = 49/172 (28%), Gaps = 51/172 (29%)

Query: 66  KDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG 125
              +    +K+AD G +           + I T  + +PEV        +    DIW+  
Sbjct: 169 DSPENLIQIKIADLGNACWYD---EHYTNSIQTREYRSPEV---LLGAPWGCGADIWSTA 222

Query: 126 ITAIELAELQPPMFDLHPMRALF--------LMSKSGFKPPALKDKDRWSSTFHN----- 172
               EL      +F+     +          ++   G  P  L    +++ TF N     
Sbjct: 223 CLIFELI-TGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLL 281

Query: 173 -------------------------------FVKIALTKNPKKRPTADKLLQ 193
                                          F+   L  +P+KR  A  L+ 
Sbjct: 282 RNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 7/63 (11%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYN-QQCDIWA 123
           L D  R G  KL DFG  A +         F GT  +  PE      +  Y+     +W+
Sbjct: 171 LIDLRR-GCAKLIDFGSGALLHDE--PYTDFDGTRVYSPPE---WISRHQYHALPATVWS 224

Query: 124 VGI 126
           +GI
Sbjct: 225 LGI 227

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 43.8 bits (103), Expect = 4e-05
 Identities = 31/134 (23%), Positives = 49/134 (36%), Gaps = 27/134 (20%)

Query: 74  VKLADFGVSAQITATINKRKSFIGT-PY-WMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  I    +  +      P  WMAPE    +R   Y  Q D+W+ G+   E+
Sbjct: 232 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE-TIFDRV--YTIQSDVWSFGVLLWEI 288

Query: 132 AEL-QPPMFDLHPMRALFLMSKSGFK-------PPALKD--KDRWSSTFHNFVKIALTKN 181
             L   P   +          K G +        P +     D W               
Sbjct: 289 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH------------GE 336

Query: 182 PKKRPTADKLLQVI 195
           P +RPT  +L++ +
Sbjct: 337 PSQRPTFSELVEHL 350

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 38/156 (24%), Positives = 56/156 (35%), Gaps = 45/156 (28%)

Query: 71  CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEV--AAVERKGGYNQQCDIWAVG-IT 127
            G +KL DFG SA+I        S+I + Y+ APE+   A      Y    DIW+ G + 
Sbjct: 178 SGVLKLIDFG-SAKILIAGEPNVSYICSRYYRAPELIFGATN----YTTNIDIWSTGCVM 232

Query: 128 AIELAELQPPMF----------------------DLHPMRALFLMSKSGFKPPALKDKDR 165
           A EL + QP +F                       +  M   +       K P ++    
Sbjct: 233 A-ELMQGQP-LFPGESGIDQLVEIIKVLGTPSREQIKTMNPNY----MEHKFPQIRPHP- 285

Query: 166 WSSTFH--------NFVKIALTKNPKKRPTADKLLQ 193
           +S  F         + +   L   P  R TA + L 
Sbjct: 286 FSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 43.4 bits (102), Expect = 5e-05
 Identities = 43/215 (20%), Positives = 64/215 (29%), Gaps = 51/215 (23%)

Query: 23  QCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVS 82
           +  I  +   A E      P      +      + +    P          VK+AD G +
Sbjct: 184 EQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNA 243

Query: 83  AQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH 142
                        I T  + + EV       GYN   DIW+    A ELA     +F+ H
Sbjct: 244 ---CWVHKHFTEDIQTRQYRSLEV---LIGSGYNTPADIWSTACMAFELATGD-YLFEPH 296

Query: 143 P-------------MRALF-----------------------LMSKSGFKPPALKD---- 162
                         +  L                        L   +  KP  L +    
Sbjct: 297 SGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVE 356

Query: 163 KDRWS----STFHNFVKIALTKNPKKRPTADKLLQ 193
           K  WS    + F +F+   L   P+KR TA + L+
Sbjct: 357 KYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 34/160 (21%), Positives = 51/160 (31%), Gaps = 52/160 (32%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEV--AAVERKGGYNQQCDIWAVG-ITA 128
           G +KL DFG SA+  +      ++I + Y+ APE+          Y    DIW+VG I  
Sbjct: 169 GTLKLCDFG-SAKKLSPSEPNVAYICSRYYRAPELIFGNQH----YTTAVDIWSVGCI-- 221

Query: 129 IELAEL--------------Q----------PPMFDLHPMRALFLMSKSGFKPPALKDKD 164
              AE+              Q          P    L  +      S +       K   
Sbjct: 222 --FAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNP----SHTDVDLYNSK-GI 274

Query: 165 RWSSTFHNFVKIA-----------LTKNPKKRPTADKLLQ 193
            WS+ F +                L   P++R    + L 
Sbjct: 275 PWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 39/224 (17%), Positives = 62/224 (27%), Gaps = 84/224 (37%)

Query: 71  CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEV--AAVERKGGYNQQCDIWAVG-IT 127
              +KL DFG SA+         ++I + ++ APE+   A E    Y    D+W++G + 
Sbjct: 178 DNTLKLCDFG-SAKKLIPSEPSVAYICSRFYRAPELMLGATE----YTPSIDLWSIGCV- 231

Query: 128 AIELAEL--------------Q----------PPMFDLHPMRALFLMSKSGFKPPALKDK 163
                EL              Q          P    +  M        +  + P LK K
Sbjct: 232 ---FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNP----HYTEVRFPTLKAK 284

Query: 164 DRWSSTFHN--------FVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQC 215
           D W               ++  L   P  R    + +                       
Sbjct: 285 D-WRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAM----------------------- 320

Query: 216 DIWAHPFFKYDMSKRVAIELLQKVSNPPTTYTDLEPDDDGEIPN 259
              AHPFF           L     +     ++     +  IP 
Sbjct: 321 ---AHPFFD---------HLRNSYESEVKNNSNFPHGVNQNIPQ 352

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 33/164 (20%), Positives = 53/164 (32%), Gaps = 54/164 (32%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPY----WM-APEVAAVERKGGYNQQCDIWA 123
            +   +KL DFG +  +T        +         W  +PE+   + +  Y    D+WA
Sbjct: 136 TKHSVIKLCDFGFARLLTG---PSDYY--DDEVATRWYRSPELLVGDTQ--YGPPVDVWA 188

Query: 124 VG-ITAIELAELQP--------------------------PMFDLHPMRALFLMSKSGFK 156
           +G + A EL    P                           +F  +          SG K
Sbjct: 189 IGCVFA-ELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF-------SGVK 240

Query: 157 PPALKDKDRWSSTFHNFVKIA-------LTKNPKKRPTADKLLQ 193
            P  +D +     F N    A       L  +P +R T ++LL 
Sbjct: 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%)

Query: 74  VKLADFGVSAQITATINKRKSFIGTPY-WMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
            K+ADFG++  I       +     P  W APE A     G +  + D+W+ GI   EL 
Sbjct: 319 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA---LYGRFTIKSDVWSFGILLTELT 375

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 5/60 (8%)

Query: 74  VKLADFGVSAQITATINKRKSFIG-TPY-WMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  + A   +  +  G  P  WMA E + + R   Y  Q D+W+ G+T  EL
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE-SILHRI--YTHQSDVWSYGVTVWEL 212

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%)

Query: 74  VKLADFGVSAQITATINKRKSFIGTPY-WMAPEVAAVERKGGYNQQCDIWAVGITAIELA 132
            K+ADFG++  I       +     P  W APE A     G +  + D+W+ GI   EL 
Sbjct: 402 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA---LYGRFTIKSDVWSFGILLTELT 458

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%)

Query: 74  VKLADFGVSAQITATINKRKSFIGT-PY-WMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           +K++DFG+S +    +      +   P  W APE       G Y+ + D+W+ GI   E 
Sbjct: 252 LKISDFGMSREEADGVYAASGGLRQVPVKWTAPEAL---NYGRYSSESDVWSFGILLWET 308

Query: 132 AEL 134
             L
Sbjct: 309 FSL 311

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 10/76 (13%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKG-GYNQQCDIWA 123
           L +  R   +K+ DFG S Q+   I     +I + ++ +PEV      G  Y+   D+W+
Sbjct: 192 LCNPKRS-AIKIVDFGSSCQLGQRIY---QYIQSRFYRSPEVLL----GMPYDLAIDMWS 243

Query: 124 VGITAIELAELQPPMF 139
           +G   +E+     P+F
Sbjct: 244 LGCILVEMH-TGEPLF 258

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 39.6 bits (93), Expect = 7e-04
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 5/60 (8%)

Query: 74  VKLADFGVSAQITATINKRKSFIG-TPY-WMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           VK+ DFG++  + A   +  +  G  P  WMA E + + R   Y  Q D+W+ G+T  EL
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE-SILHRI--YTHQSDVWSYGVTVWEL 212

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	302
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.98
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.98
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.98
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.98
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.98
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.98
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.98
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.98
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.98
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.97
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.97
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.97
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.97
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.97
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.97
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.97
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.97
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.97
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.97
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.97
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.96
3uqc_A	286	Probable conserved transmembrane protein; structur	99.94
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.93
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.72
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.52
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.17
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.73
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.67
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.54
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.27
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.0
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	96.96
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	96.5
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	93.63
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	90.86
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	89.16
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	85.48

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=2.7e-51  Score=355.29  Aligned_cols=199  Identities=16%  Similarity=0.240  Sum_probs=175.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|||||||+||+|. +++...+   .++|.+++.+++||+.||+|||++||+||||||    ++.+|
T Consensus        94 Iv~l~~~~~~~~~~yivmEy~~gG~L~-~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g  169 (311)
T 4aw0_A           94 FVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIG---SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM  169 (311)
T ss_dssp             BCCEEEEEECSSEEEEEECCCTTEEHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS
T ss_pred             CCeEEEEEEeCCEEEEEEecCCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCC
Confidence            688998887    59999999999999 8887777   799999999999999999999999999999999    88999


Q ss_pred             CEEEecccccccccccc--ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATI--NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      ++||+|||+|+.+....  ....+.+||+.|||||++.   +..|+.++|||||||++|+|++|++||.+.+......++
T Consensus       170 ~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~---~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i  246 (311)
T 4aw0_A          170 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKI  246 (311)
T ss_dssp             CEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHH---HSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHc---CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            99999999998875432  3345779999999999996   677999999999999999999999999999999988888


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKR  230 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~  230 (302)
                      .......     +..+++++++||.+||+.||++|||++|++.+.|++.                    ||||++.+|..
T Consensus       247 ~~~~~~~-----p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~--------------------Hp~F~~idw~~  301 (311)
T 4aw0_A          247 IKLEYDF-----PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA--------------------HPFFESVTWEN  301 (311)
T ss_dssp             HHTCCCC-----CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHT--------------------SGGGTTCCCTT
T ss_pred             HcCCCCC-----CcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHC--------------------CCCcCCCCHHH
Confidence            8876543     3568999999999999999999999999876555544                    99999888765


Q ss_pred             H
Q psy3574         231 V  231 (302)
Q Consensus       231 ~  231 (302)
                      +
T Consensus       302 l  302 (311)
T 4aw0_A          302 L  302 (311)
T ss_dssp             G
T ss_pred             h
Confidence            4

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=2.2e-50  Score=349.35  Aligned_cols=193  Identities=21%  Similarity=0.296  Sum_probs=169.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|||||||+||+|. +++...+   .+++.+++.+++||+.||+|||++||+||||||    ++.+|
T Consensus        88 Iv~l~~~~~~~~~~~ivmEy~~gg~L~-~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g  163 (304)
T 3ubd_A           88 IVKLHYAFQTEGKLYLILDFLRGGDLF-TRLSKEV---MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG  163 (304)
T ss_dssp             EECEEEEEEETTEEEEEECCCTTCEEH-HHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTS
T ss_pred             CCeEEEEEEECCEEEEEEEcCCCCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCC
Confidence            688888877    59999999999999 8887777   899999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+|+..........+.+||+.|||||++.   +..|+.++|||||||++|+|++|++||.+.+..+....+..
T Consensus       164 ~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~---~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~  240 (304)
T 3ubd_A          164 HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN---RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK  240 (304)
T ss_dssp             CEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHH---TSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CEEecccccceeccCCCccccccccCcccCCHHHhc---cCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHc
Confidence            999999999987766555566789999999999995   77899999999999999999999999999999998888887


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC-----HHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT-----ADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t-----~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      .....     +..+|+++++||.+||+.||++|||     ++++++                          ||||++.+
T Consensus       241 ~~~~~-----p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~--------------------------Hp~f~~id  289 (304)
T 3ubd_A          241 AKLGM-----PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR--------------------------HSFFSTID  289 (304)
T ss_dssp             CCCCC-----CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT--------------------------SGGGTTCC
T ss_pred             CCCCC-----CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc--------------------------CccccCCC
Confidence            65443     3568999999999999999999998     578888                          99999877


Q ss_pred             hhHH
Q psy3574         228 SKRV  231 (302)
Q Consensus       228 ~~~~  231 (302)
                      |..+
T Consensus       290 w~~l  293 (304)
T 3ubd_A          290 WNKL  293 (304)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6543

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=4e-50  Score=352.93  Aligned_cols=183  Identities=33%  Similarity=0.593  Sum_probs=164.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|||||||+||+|. +++..+    .+++.+++.|++||+.||+|||++||+||||||    ++.+|
T Consensus       133 IV~l~~~~~~~~~~~ivmEy~~gg~L~-~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g  207 (346)
T 4fih_A          133 VVEMYNSYLVGDELWVVMEFLEGGALT-DIVTHT----RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG  207 (346)
T ss_dssp             BCCEEEEEEETTEEEEEECCCTTEEHH-HHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             CCcEEEEEEECCEEEEEEeCCCCCcHH-HHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCC
Confidence            689999887    59999999999999 787654    599999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+|+.+........+.+||+.|||||++.   +..|+.++|||||||++|||++|++||.+.+..+.+..+..
T Consensus       208 ~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~---~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~  284 (346)
T 4fih_A          208 RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELIS---RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD  284 (346)
T ss_dssp             CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHT---TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             CEEEecCcCceecCCCCCcccccccCcCcCCHHHHC---CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc
Confidence            999999999998876655667789999999999995   67799999999999999999999999999998888877766


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..  ++....+..+++++++||.+||..||++|||+.|+|+
T Consensus       285 ~~--~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          285 NL--PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             SS--CCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CC--CCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            43  3334445678999999999999999999999999999

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=3.5e-49  Score=355.09  Aligned_cols=183  Identities=33%  Similarity=0.593  Sum_probs=164.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|||||||+||+|. ++++.+    .+++.+++.|++||+.||+|||++||+||||||    ++.+|
T Consensus       210 IV~l~~~~~~~~~~~iVmEy~~gG~L~-~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g  284 (423)
T 4fie_A          210 VVEMYNSYLVGDELWVVMEFLEGGALT-DIVTHT----RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG  284 (423)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTEEHH-HHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTC
T ss_pred             CCceEEEEEECCEEEEEEeCCCCCcHH-HHHhcc----CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCC
Confidence            689999887    59999999999999 788654    499999999999999999999999999999999    88999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+|+.+........+.+||+.|||||++.   +..|+.++|||||||++|+|++|++||.+.+....+..+..
T Consensus       285 ~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~---~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~  361 (423)
T 4fie_A          285 RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELIS---RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD  361 (423)
T ss_dssp             CEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHT---TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             CEEEecCccceECCCCCccccccccCcCcCCHHHHC---CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc
Confidence            999999999998876655667789999999999995   67799999999999999999999999999999888888776


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..  ++....+..+++++++||.+||..||++|||+.|+|+
T Consensus       362 ~~--~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          362 NL--PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             SC--CCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CC--CCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            53  3344456778999999999999999999999999999

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=5.7e-49  Score=346.10  Aligned_cols=184  Identities=22%  Similarity=0.357  Sum_probs=162.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|||||||+||+|. +++.... +..++|.+++.|+.||+.||+|||++||+||||||    ++.+|
T Consensus        85 IV~~~~~~~~~~~~yiVmEy~~gg~L~-~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g  162 (350)
T 4b9d_A           85 IVQYRESFEENGSLYIVMDYCEGGDLF-KRINAQK-GVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG  162 (350)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTCBHH-HHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTC
T ss_pred             CCcEEEEEEECCEEEEEEeCCCCCcHH-HHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC
Confidence            689999887    59999999999999 6765432 12578999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+|+.+........+.+||+.|||||++.   +..|+.++|||||||++|+|++|++||.+.+..+.+.++..
T Consensus       163 ~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~---~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~  239 (350)
T 4b9d_A          163 TVQLGDFGIARVLNSTVELARACIGTPYYLSPEICE---NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS  239 (350)
T ss_dssp             CEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHT---TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CEEEcccccceeecCCcccccccCCCccccCHHHHC---CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc
Confidence            999999999998766544455678999999999996   67799999999999999999999999999999998888887


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+    .+..++.++++||.+||+.||++|||+.++|+
T Consensus       240 ~~~~~----~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          240 GSFPP----VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             TCCCC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCC----CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            65432    24668999999999999999999999999999

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=4.9e-48  Score=333.02  Aligned_cols=181  Identities=20%  Similarity=0.273  Sum_probs=154.0

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCC--CCCCCCcC---
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG--FKPPALKD---   67 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--i~Hrdlkp---   67 (302)
                      ||++|+.|.        +|||||||+||+|. +++...+   .+++..++.++.||+.||+|||++|  |+||||||   
T Consensus        87 IV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~-~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NI  162 (290)
T 3fpq_A           87 IVRFYDSWESTVKGKKCIVLVTELMTSGTLK-TYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNI  162 (290)
T ss_dssp             BCCEEEEEEEEETTEEEEEEEEECCCSCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGE
T ss_pred             CCcEEEEEeeccCCCcEEEEEEeCCCCCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhhe
Confidence            689998774        48999999999999 8888777   8999999999999999999999998  99999999   


Q ss_pred             -CC-CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          68 -KD-RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        68 -~~-~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                       ++ .+|.+||+|||+|+....  ....+.+||+.|||||++.    ..|+.++|||||||++|+|+||++||.+.....
T Consensus       163 Ll~~~~g~vKl~DFGla~~~~~--~~~~~~~GTp~YmAPE~~~----~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~  236 (290)
T 3fpq_A          163 FITGPTGSVKIGDLGLATLKRA--SFAKAVIGTPEFMAPEMYE----EKYDESVDVYAFGMCMLEMATSEYPYSECQNAA  236 (290)
T ss_dssp             EESSTTSCEEECCTTGGGGCCT--TSBEESCSSCCCCCGGGGG----TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH
T ss_pred             eEECCCCCEEEEeCcCCEeCCC--CccCCcccCccccCHHHcC----CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH
Confidence             54 579999999999976543  3345678999999999983    359999999999999999999999998776665


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+.........++  ..+..+++++++||.+||..||++|||+.++|+
T Consensus       237 ~~~~~i~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          237 QIYRRVTSGVKPA--SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHTTTCCCG--GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHcCCCCC--CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            5555544443332  224557899999999999999999999999999

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=4.3e-48  Score=330.70  Aligned_cols=179  Identities=22%  Similarity=0.271  Sum_probs=147.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +||||||| +|+|. +++..++   ++++.+++.+++||+.||+|||++||+||||||    ++.+|
T Consensus        75 Iv~~~~~~~~~~~~~ivmEy~-~g~L~-~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~  149 (275)
T 3hyh_A           75 IIKLYDVIKSKDEIIMVIEYA-GNELF-DYIVQRD---KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHL  149 (275)
T ss_dssp             BCCEEEEEECSSEEEEEEECC-CEEHH-HHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTC
T ss_pred             CCeEEEEEEECCEEEEEEeCC-CCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCC
Confidence            688888876    59999999 57999 7777766   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      ++||+|||+|+..... ....+.+||+.|||||++.   +..| +.++||||+||++|+|++|+.||.+.+.......+.
T Consensus       150 ~vkl~DFGla~~~~~~-~~~~~~~GT~~Y~APE~~~---~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~  225 (275)
T 3hyh_A          150 NVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVIS---GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS  225 (275)
T ss_dssp             CEEECCSSCC----------------CTTSCHHHHS---SSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CEEEeecCCCeecCCC-CccCCeeECcccCChhhhc---CCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            9999999999876543 3445678999999999996   4444 689999999999999999999999988888887777


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ......     +..+++++++||.+||+.||++|||++++++
T Consensus       226 ~~~~~~-----p~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          226 NGVYTL-----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             HTCCCC-----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cCCCCC-----CCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            765433     3568999999999999999999999999999

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=3.3e-48  Score=339.70  Aligned_cols=203  Identities=15%  Similarity=0.114  Sum_probs=168.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|||||||+||+|. ++++..+   .|++.+++.|+.||+.||+|||++||+||||||    ++.+|
T Consensus       112 IV~l~~~~~~~~~~~ivmEy~~gg~L~-~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g  187 (336)
T 4g3f_A          112 IVPLYGAVREGPWVNIFMELLEGGSLG-QLIKQMG---CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG  187 (336)
T ss_dssp             BCCEEEEEEETTEEEEEECCCTTCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTS
T ss_pred             CCcEEEEEEECCEEEEEEeccCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCC
Confidence            689999887    59999999999999 8888777   899999999999999999999999999999999    77776


Q ss_pred             -CEEEeccccccccccccc-----cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH
Q psy3574          73 -DVKLADFGVSAQITATIN-----KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRA  146 (302)
Q Consensus        73 -~ikL~DFg~a~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  146 (302)
                       ++||+|||+|+.+.....     .....+||+.|||||++.   +..|+.++|||||||++|+|++|++||.+.+....
T Consensus       188 ~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~---~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  264 (336)
T 4g3f_A          188 SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM---GKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL  264 (336)
T ss_dssp             CCEEECCCTTCEEC------------CCCCCCGGGCCHHHHT---TCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC
T ss_pred             CEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHC---CCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH
Confidence             699999999987654321     123468999999999996   67799999999999999999999999988777777


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCcccc
Q psy3574         147 LFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKY  225 (302)
Q Consensus       147 ~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~  225 (302)
                      ...+.....  +....+..+++.+.+||.+||+.||.+|||+.|+++++..........             +|||+..
T Consensus       265 ~~~i~~~~~--~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l-------------~hPw~~~  328 (336)
T 4g3f_A          265 CLKIASEPP--PIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGL-------------KSPWKGE  328 (336)
T ss_dssp             HHHHHHSCC--GGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSS-------------CSCSSSS
T ss_pred             HHHHHcCCC--CchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhc-------------cCCCcCC
Confidence            777766532  223346778999999999999999999999999999876554433322             3999964

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.2e-45  Score=346.77  Aligned_cols=194  Identities=18%  Similarity=0.220  Sum_probs=165.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|+    +|||||||+||+|. .++...+   .|++..++.|++||+.||.|||++||+||||||    ++.+|
T Consensus       254 IV~l~~~f~~~~~lylVmEy~~GGdL~-~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G  329 (689)
T 3v5w_A          254 IVCMSYAFHTPDKLSFILDLMNGGDLH-YHLSQHG---VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG  329 (689)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTS
T ss_pred             EeEEEEEEEECCEEEEEEecCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCC
Confidence            688888887    59999999999999 7787777   799999999999999999999999999999999    88999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC---ChHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL---HPMRALFL  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~---~~~~~~~~  149 (302)
                      ++||+|||+|+.+...  ...+.+||+.|||||++.  ++.+|+.++|||||||++|+|++|.+||.+.   +.......
T Consensus       330 ~vKL~DFGlA~~~~~~--~~~t~~GTp~YmAPEvl~--~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~  405 (689)
T 3v5w_A          330 HVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQ--KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM  405 (689)
T ss_dssp             CEEECCCTTCEECSSC--CCCSCCSCGGGCCHHHHS--TTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHH
T ss_pred             CEEecccceeeecCCC--CCCCccCCcCccCHHHHh--CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Confidence            9999999999877653  345679999999999995  3457999999999999999999999999753   23344444


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC-----HHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccc
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT-----ADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK  224 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t-----~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~  224 (302)
                      +......     .+..+|+++++||.+||+.||.+|++     ++++++                          ||||+
T Consensus       406 i~~~~~~-----~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~--------------------------HpfF~  454 (689)
T 3v5w_A          406 TLTMAVE-----LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE--------------------------SPFFR  454 (689)
T ss_dssp             HHHCCCC-----CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT--------------------------SGGGT
T ss_pred             hcCCCCC-----CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc--------------------------Ccccc
Confidence            5444332     24678999999999999999999998     577777                          99999


Q ss_pred             cchhhHHHH
Q psy3574         225 YDMSKRVAI  233 (302)
Q Consensus       225 ~~~~~~~~~  233 (302)
                      +.+|..+..
T Consensus       455 ~idW~~l~~  463 (689)
T 3v5w_A          455 SLDWQMVFL  463 (689)
T ss_dssp             TCCHHHHHT
T ss_pred             CCCHHHHHc
Confidence            888776543

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=4.4e-45  Score=316.82  Aligned_cols=196  Identities=17%  Similarity=0.232  Sum_probs=158.4

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++|+.+.   +|||||||+||+|. +++....  .++++.++..|+.||+.||+|||+++|+||||||    ++.+++
T Consensus        94 IV~l~g~~~~~~~~iVmEy~~gGsL~-~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~  170 (307)
T 3omv_A           94 ILLFMGYMTKDNLAIVTQWCEGSSLY-KHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLT  170 (307)
T ss_dssp             BCCEEEEECSSSCEEEEECCSSCBHH-HHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEE
T ss_pred             EeeEEEEEECCeEEEEEEcCCCCCHH-HHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCc
Confidence            688888654   58999999999999 6665432  2799999999999999999999999999999999    888999


Q ss_pred             EEEecccccccccccc--ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATI--NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||+|+......  ......+||+.|||||++.+.....|+.++|||||||++|||+||+.||.+.+.......+.
T Consensus       171 ~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~  250 (307)
T 3omv_A          171 VKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV  250 (307)
T ss_dssp             EEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHH
T ss_pred             EEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHH
Confidence            9999999998765321  23345689999999999964334568999999999999999999999999877776666666


Q ss_pred             hcCCCCCC-CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHh
Q psy3574         152 KSGFKPPA-LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHR  199 (302)
Q Consensus       152 ~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~  199 (302)
                      ..+...|. ...+..++..+.+||.+||+.||++|||+.++++.+...+
T Consensus       251 ~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~  299 (307)
T 3omv_A          251 GRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ  299 (307)
T ss_dssp             HTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred             hcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            55544443 3446678999999999999999999999999998665443

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-44  Score=324.74  Aligned_cols=186  Identities=17%  Similarity=0.176  Sum_probs=154.9

Q ss_pred             Cchhhhcch----------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---
Q psy3574           1 MSRVFNHFL----------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---   67 (302)
Q Consensus         1 iv~~~~~~~----------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---   67 (302)
                      ||++|+.+.          +|||||||+ |+|. +++...+   ++++..++.|++||+.||+|||++||+||||||   
T Consensus       115 Iv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~-~~i~~~~---~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NI  189 (398)
T 4b99_A          115 IIAIKDILRPTVPYGEFKSVYVVLDLME-SDLH-QIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNL  189 (398)
T ss_dssp             BCCEEEECCCSSCTTTCCCEEEEEECCS-EEHH-HHHTSSS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGE
T ss_pred             cceEeeeeecccccccCCEEEEEEeCCC-CCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCcccc
Confidence            577777543          489999996 5898 7777766   899999999999999999999999999999999   


Q ss_pred             -CCCCCCEEEeccccccccccc----cccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q psy3574          68 -KDRCGDVKLADFGVSAQITAT----INKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH  142 (302)
Q Consensus        68 -~~~~~~ikL~DFg~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  142 (302)
                       ++.+|.+||+|||+|+.+...    .....+.+||+.|||||++.  ....|+.++||||+||++|+|++|++||.+.+
T Consensus       190 l~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~--~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~  267 (398)
T 4b99_A          190 LVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML--SLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN  267 (398)
T ss_dssp             EECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHT--TCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS
T ss_pred             ccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhc--CCCCCCChhheehhHHHHHHHHHCCCCCCCCC
Confidence             889999999999999876442    12345679999999999986  23457999999999999999999999999999


Q ss_pred             hHHHHHHHHhcCCCCCCCC--------------------------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         143 PMRALFLMSKSGFKPPALK--------------------------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       143 ~~~~~~~i~~~~~~~~~~~--------------------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+.+..|......++...                          ....+++++.+||.+||..||.+|||+.++|+
T Consensus       268 ~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          268 YVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             HHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            9888888766433332110                          11346899999999999999999999999999

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=6.6e-44  Score=317.33  Aligned_cols=184  Identities=22%  Similarity=0.247  Sum_probs=142.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC-C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR-C   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~-~   71 (302)
                      ||++++.|.    +|||||||+||+|. ++++      .+++.+++.+++||+.||+|||++||+||||||    ++. .
T Consensus        82 Iv~l~~~~~~~~~~~lvmE~~~g~~L~-~~~~------~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~  154 (361)
T 4f9c_A           82 VMGVKYCFRKNDHVVIAMPYLEHESFL-DILN------SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRL  154 (361)
T ss_dssp             BCCCSEEEEETTEEEEEEECCCCCCHH-HHHT------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTT
T ss_pred             CceEEEEEEECCEEEEEEeCCCcccHH-HHHc------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCC
Confidence            577887776    59999999999999 7663      589999999999999999999999999999999    444 4


Q ss_pred             CCEEEecccccccccccc----------------------------ccccccccCcccchhhcccccccCCCCchhhHHH
Q psy3574          72 GDVKLADFGVSAQITATI----------------------------NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWA  123 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Diws  123 (302)
                      +.+||+|||+|+......                            ....+.+||+.|||||++.  ....|+.++||||
T Consensus       155 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--~~~~y~~~~DiWS  232 (361)
T 4f9c_A          155 KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLT--KCPNQTTAIDMWS  232 (361)
T ss_dssp             TEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHT--TCSCCCTHHHHHH
T ss_pred             CeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHc--CCCCCCCccchhh
Confidence            899999999997654321                            1123468999999999996  2345899999999


Q ss_pred             HHHHHHHHHhCCCCCCCC-ChHHHHHHHHhcC--------------------------------------CCC-------
Q psy3574         124 VGITAIELAELQPPMFDL-HPMRALFLMSKSG--------------------------------------FKP-------  157 (302)
Q Consensus       124 lG~il~ell~g~~pf~~~-~~~~~~~~i~~~~--------------------------------------~~~-------  157 (302)
                      +||++|+|++|+.||... +....+..|....                                      ...       
T Consensus       233 lG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~  312 (361)
T 4f9c_A          233 AGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDI  312 (361)
T ss_dssp             HHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC-------------
T ss_pred             hHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccc
Confidence            999999999999999654 4444444332200                                      000       


Q ss_pred             ----CCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         158 ----PALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       158 ----~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                          .....+..++++++|||++||+.||++|+|++|+|+
T Consensus       313 ~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~  352 (361)
T 4f9c_A          313 QGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALL  352 (361)
T ss_dssp             ---------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             ccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                011223567899999999999999999999999999

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.7e-44  Score=311.93  Aligned_cols=182  Identities=22%  Similarity=0.249  Sum_probs=135.7

Q ss_pred             Cchhhhcch----------------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCC
Q psy3574           1 MSRVFNHFL----------------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPA   64 (302)
Q Consensus         1 iv~~~~~~~----------------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrd   64 (302)
                      ||++|+.|.                +|||||||+||+|. +++.........++..++.++.||+.||+|||++||+|||
T Consensus        65 IV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~-~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRD  143 (299)
T 4g31_A           65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLK-DWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRD  143 (299)
T ss_dssp             BCCEEEEEEEEC----------CEEEEEEEECCCSCCHH-HHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             CCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHH-HHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCcccc
Confidence            688998875                58999999999999 8888766212233345889999999999999999999999


Q ss_pred             CcC----CCCCCCEEEeccccccccccccc------------cccccccCcccchhhcccccccCCCCchhhHHHHHHHH
Q psy3574          65 LKD----KDRCGDVKLADFGVSAQITATIN------------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA  128 (302)
Q Consensus        65 lkp----~~~~~~ikL~DFg~a~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il  128 (302)
                      |||    ++.+|.+||+|||+|+.+.....            ...+.+||+.|||||++.   +..|+.++|||||||++
T Consensus       144 lKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~---~~~y~~~~DiwSlGvil  220 (299)
T 4g31_A          144 LKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIH---GNSYSHKVDIFSLGLIL  220 (299)
T ss_dssp             CCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHT---TCCCCTHHHHHHHHHHH
T ss_pred             CcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHc---CCCCCCHHHHHHHHHHH
Confidence            999    88899999999999987654321            123468999999999996   67799999999999999


Q ss_pred             HHHHhCCCCCCCCChH-HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         129 IELAELQPPMFDLHPM-RALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       129 ~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      |||++   ||...... .....+.... .++   .....++.+.+||.+||+.||.+|||+.++++
T Consensus       221 yell~---Pf~~~~~~~~~~~~~~~~~-~p~---~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          221 FELLY---PFSTQMERVRTLTDVRNLK-FPP---LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHHS---CCSSHHHHHHHHHHHHTTC-CCH---HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHcc---CCCCccHHHHHHHHHhcCC-CCC---CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            99996   77543222 2222232222 111   12334677899999999999999999999999

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.5e-43  Score=332.69  Aligned_cols=184  Identities=21%  Similarity=0.251  Sum_probs=160.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHH-hccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC--
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWA-VGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD--   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~-~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~--   69 (302)
                      ||++|+.|.    +|||||||+||+|. +++. ..+   .|++.+++.+++||+.||.|||++||+||||||    ++  
T Consensus       216 Iv~l~~~~~~~~~~~iv~E~~~gg~L~-~~i~~~~~---~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~  291 (573)
T 3uto_A          216 LVNLHDAFEDDNEMVMIYEFMSGGELF-EKVADEHN---KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK  291 (573)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCCCBHH-HHHTCTTS---CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS
T ss_pred             CCeEEEEEEECCEEEEEEeecCCCcHH-HHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCC
Confidence            688888877    59999999999999 5554 445   799999999999999999999999999999999    33  


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      ..+.+||+|||+|+.+... ......+||+.|||||++.   +..|+.++|||||||++|+|++|.+||.+.+..+.+..
T Consensus       292 ~~~~vKl~DFG~a~~~~~~-~~~~~~~GT~~y~APEv~~---~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~  367 (573)
T 3uto_A          292 RSNELKLIDFGLTAHLDPK-QSVKVTTGTAEFAAPEVAE---GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRN  367 (573)
T ss_dssp             SCCCEEECCCSSCEECCTT-SEEEEECSSGGGCCHHHHT---TCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH
T ss_pred             CCCCEEEeeccceeEccCC-CceeeeEECccccCHHHhC---CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH
Confidence            4589999999999887654 3345678999999999996   67799999999999999999999999999999998888


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+. ..+..++.++++||.+||+.||.+|||+.++|+
T Consensus       368 i~~~~~~~~~-~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          368 VKSCDWNMDD-SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             HHTTCCCCCS-GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCc-ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            8876654433 234568999999999999999999999999999

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=4.6e-43  Score=303.84  Aligned_cols=186  Identities=13%  Similarity=0.195  Sum_probs=158.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc----------ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCc
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI----------TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK   66 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~----------~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlk   66 (302)
                      ||++||.+.    .|||||||+||+|. +++...+          ....|++.++..|+.||+.||+|||+++|+|||||
T Consensus        77 IV~l~g~~~~~~~~~lV~Ey~~~G~L~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlK  155 (299)
T 4asz_A           77 IVKFYGVCVEGDPLIMVFEYMKHGDLN-KFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLA  155 (299)
T ss_dssp             BCCEEEEECSSSSEEEEEECCTTCBHH-HHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CccEEEEEeeCCEEEEEEEcCCCCcHH-HHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccC
Confidence            689999876    59999999999999 7776532          12358999999999999999999999999999999


Q ss_pred             C----CCCCCCEEEecccccccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q psy3574          67 D----KDRCGDVKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMF  139 (302)
Q Consensus        67 p----~~~~~~ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~  139 (302)
                      |    ++.++.+||+|||+|+........  .....||+.|||||++.   +..|+.++|||||||++|||+| |+.||.
T Consensus       156 p~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~---~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~  232 (299)
T 4asz_A          156 TRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM---YRKFTTESDVWSLGVVLWEIFTYGKQPWY  232 (299)
T ss_dssp             GGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             HhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHc---CCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence            9    889999999999999876543221  23346899999999996   6779999999999999999998 899999


Q ss_pred             CCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         140 DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       140 ~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      +.+..+....+......+    .+..+++++.+||.+||+.||++|||+.++...
T Consensus       233 ~~~~~~~~~~i~~~~~~~----~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~  283 (299)
T 4asz_A          233 QLSNNEVIECITQGRVLQ----RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTL  283 (299)
T ss_dssp             TSCHHHHHHHHHHTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCCCC----CCccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            999888888887754322    246789999999999999999999999999763

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=2e-42  Score=303.69  Aligned_cols=188  Identities=15%  Similarity=0.168  Sum_probs=152.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc------------cccccccchhHHHhhHHHHHHHHHhCCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT------------AIELAELQPPMFDLHPMRALFLMSKSGFKPPA   64 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrd   64 (302)
                      ||++||.+.    .|||||||+||+|. ++++....            ..++++.++..|+.||+.||+|||+++|+|||
T Consensus       105 IV~l~g~~~~~~~~~lV~Ey~~~G~L~-~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRD  183 (329)
T 4aoj_A          105 IVRFFGVCTEGRPLLMVFEYMRHGDLN-RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRD  183 (329)
T ss_dssp             BCCEEEEECSSSSEEEEEECCTTCBHH-HHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcEEEEEEECCEEEEEEEcCCCCcHH-HHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeeccc
Confidence            689999876    59999999999999 77765321            12589999999999999999999999999999


Q ss_pred             CcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCC
Q psy3574          65 LKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPP  137 (302)
Q Consensus        65 lkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~p  137 (302)
                      |||    ++.++.+||+|||+|+.......  .....+||+.|||||++.   +..|+.++|||||||++|||+| |+.|
T Consensus       184 LKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~---~~~~~~~sDvwS~Gvvl~Ellt~G~~P  260 (329)
T 4aoj_A          184 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL---YRKFTTESDVWSFGVVLWEIFTYGKQP  260 (329)
T ss_dssp             CCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHT---TCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhc---CCCCCccccccchHHHHHHHHcCCCCC
Confidence            999    88999999999999987644321  223467999999999996   6779999999999999999999 8999


Q ss_pred             CCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         138 MFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       138 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      |.+.+..+....+......    ..+..+++++.+|+.+||+.||++|||+.++++.|.
T Consensus       261 f~~~~~~~~~~~i~~g~~~----~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~  315 (329)
T 4aoj_A          261 WYQLSNTEAIDCITQGREL----ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQ  315 (329)
T ss_dssp             TCSSCHHHHHHHHHHTCCC----CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCC----CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence            9999988888777765322    234678999999999999999999999999988553

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=2.2e-42  Score=300.79  Aligned_cols=187  Identities=13%  Similarity=0.139  Sum_probs=159.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc-------------ccccccccchhHHHhhHHHHHHHHHhCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI-------------TAIELAELQPPMFDLHPMRALFLMSKSGFKPP   63 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hr   63 (302)
                      ||++||.+.    +|||||||++|+|. +++....             ....+++.++..|+.||+.||+|||+++|+||
T Consensus        91 IV~l~g~~~~~~~~~lV~Ey~~~G~L~-~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHR  169 (308)
T 4gt4_A           91 VVCLLGVVTKDQPLSMIFSYCSHGDLH-EFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHK  169 (308)
T ss_dssp             BCCEEEEECSSSSCEEEEECCSSCBHH-HHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             CCCcceEEEECCEEEEEEEcCCCCcHH-HHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence            688999876    59999999999999 7775432             12358889999999999999999999999999


Q ss_pred             CCcC----CCCCCCEEEecccccccccccc--ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCC
Q psy3574          64 ALKD----KDRCGDVKLADFGVSAQITATI--NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQP  136 (302)
Q Consensus        64 dlkp----~~~~~~ikL~DFg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~  136 (302)
                      ||||    +++++++||+|||+|+......  ......+||+.|||||++.   +..|+.++|||||||++|||+| |..
T Consensus       170 DLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~---~~~~s~ksDVwSfGvvl~El~t~g~~  246 (308)
T 4gt4_A          170 DLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM---YGKFSIDSDIWSYGVVLWEVFSYGLQ  246 (308)
T ss_dssp             CCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             CccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHh---CCCCCccchhhhHHHHHHHHHhCCCC
Confidence            9999    8899999999999998765432  2234567999999999996   6779999999999999999998 899


Q ss_pred             CCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         137 PMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       137 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ||.+.+..+....+......+    .+..++..+.+|+.+||+.||++|||+.++++.|
T Consensus       247 Pf~~~~~~~~~~~i~~~~~~~----~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L  301 (308)
T 4gt4_A          247 PYCGYSNQDVVEMIRNRQVLP----CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL  301 (308)
T ss_dssp             TTTTCCHHHHHHHHHTTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHcCCCCC----CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            999999888887776654322    2467899999999999999999999999999854

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.1e-42  Score=307.79  Aligned_cols=189  Identities=16%  Similarity=0.162  Sum_probs=156.0

Q ss_pred             Cchhhhcch-----heeEEEecCCcchHHHHHHhccc-------------cccccccchhHHHhhHHHHHHHHHhCCCCC
Q psy3574           1 MSRVFNHFL-----QVAAVERKGGYNQQCDIWAVGIT-------------AIELAELQPPMFDLHPMRALFLMSKSGFKP   62 (302)
Q Consensus         1 iv~~~~~~~-----~~iv~E~~~~g~L~~~~~~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~H   62 (302)
                      ||++||.+.     +|||||||++|+|. ++++....             ...|++..+..++.||+.||+|||+++|+|
T Consensus       130 IV~l~g~~~~~~~~~~iV~Ey~~~G~L~-~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiH  208 (353)
T 4ase_A          130 VVNLLGACTKPGGPLMVIVEFCKFGNLS-TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH  208 (353)
T ss_dssp             BCCEEEEECCTTSCCEEEEECCTTEEHH-HHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EEEEEEEEEecCCEEEEEEEcCCCCCHH-HHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeec
Confidence            688998764     58999999999999 77765321             124888999999999999999999999999


Q ss_pred             CCCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CC
Q psy3574          63 PALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQ  135 (302)
Q Consensus        63 rdlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~  135 (302)
                      |||||    ++.++.+||+|||+|+.+.....  .....+||+.|||||++.   +..|+.++|||||||++|||+| |+
T Consensus       209 RDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~---~~~y~~ksDVwS~Gv~l~El~t~G~  285 (353)
T 4ase_A          209 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEIFSLGA  285 (353)
T ss_dssp             SCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred             CccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHh---cCCCCCcccEeehHHHHHHHHhCCC
Confidence            99999    88899999999999987654322  234567899999999996   6779999999999999999998 99


Q ss_pred             CCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         136 PPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       136 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .||.+.+....+..+...+..++   .+..+++++.++|.+||+.||++|||+.+++++|-
T Consensus       286 ~Pf~~~~~~~~~~~~i~~g~~~~---~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~  343 (353)
T 4ase_A          286 SPYPGVKIDEEFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG  343 (353)
T ss_dssp             CSSTTCCCSHHHHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCCCC---CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence            99988765554444444433322   34678999999999999999999999999999653

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.4e-42  Score=308.67  Aligned_cols=193  Identities=23%  Similarity=0.307  Sum_probs=163.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    +|+||||++||+|. .++....   .+++..++.++.||+.||+|||++||+||||||    ++.+|
T Consensus        86 Iv~l~~~~~~~~~~~lv~E~~~gg~L~-~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g  161 (353)
T 3txo_A           86 LTQLFCCFQTPDRLFFVMEFVNGGDLM-FHIQKSR---RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG  161 (353)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             eeeEEEEEEeCCEEEEEEeCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCC
Confidence            567777666    58999999999999 7777766   799999999999999999999999999999999    88999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+++............+||+.|+|||++.   +..|+.++|||||||++|+|++|..||.+.+.......+..
T Consensus       162 ~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~  238 (353)
T 3txo_A          162 HCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQ---EMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN  238 (353)
T ss_dssp             CEEECCCTTCBCSCC---------CCGGGCCHHHHH---HHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CEEEccccceeecccCCccccccCCCcCeEChhhcC---CCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            999999999986554444556678999999999996   55689999999999999999999999999999988888887


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH------HHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccc
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA------DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYD  226 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~------~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~  226 (302)
                      .....+     ..++..+.+||++||..||.+||++      +++++                          ||||+..
T Consensus       239 ~~~~~p-----~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~--------------------------hp~f~~~  287 (353)
T 3txo_A          239 DEVVYP-----TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR--------------------------HPFFKEI  287 (353)
T ss_dssp             CCCCCC-----TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT--------------------------SGGGTTC
T ss_pred             CCCCCC-----CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh--------------------------CCcccCC
Confidence            655443     4579999999999999999999998      77888                          9999987


Q ss_pred             hhhHH
Q psy3574         227 MSKRV  231 (302)
Q Consensus       227 ~~~~~  231 (302)
                      .|...
T Consensus       288 ~w~~l  292 (353)
T 3txo_A          288 DWAQL  292 (353)
T ss_dssp             CHHHH
T ss_pred             CHHHH
Confidence            76544

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.5e-41  Score=305.91  Aligned_cols=194  Identities=21%  Similarity=0.286  Sum_probs=162.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    +|+||||++||+|. .++...+   .+++..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus       115 Iv~l~~~~~~~~~~~lV~E~~~gg~L~-~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g  190 (396)
T 4dc2_A          115 LVGLHSCFQTESRLFFVIEYVNGGDLM-FHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG  190 (396)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             cCeeEEEEEECCEEEEEEEcCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCC
Confidence            567777766    59999999999999 7777766   799999999999999999999999999999999    88999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC---------Ch
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL---------HP  143 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~---------~~  143 (302)
                      ++||+|||+++............+||+.|+|||++.   +..|+.++|||||||++|+|++|+.||...         ..
T Consensus       191 ~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~  267 (396)
T 4dc2_A          191 HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILR---GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE  267 (396)
T ss_dssp             CEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHT---TCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCH
T ss_pred             CEEEeecceeeecccCCCccccccCCcccCCchhhc---CCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhH
Confidence            999999999986544444556778999999999996   677899999999999999999999999632         12


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH------HHHHHHHHHHhHHHHHHhhhCCCCCCccc
Q psy3574         144 MRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA------DKLLQVILIHRARVAAVERKGGYNQQCDI  217 (302)
Q Consensus       144 ~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~------~~ll~~l~~~~~~~~~~~~~~~~~~~~~i  217 (302)
                      ......+.......     +..++.++++||++||+.||.+||++      .++++                        
T Consensus       268 ~~~~~~i~~~~~~~-----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~------------------------  318 (396)
T 4dc2_A          268 DYLFQVILEKQIRI-----PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG------------------------  318 (396)
T ss_dssp             HHHHHHHHHCCCCC-----CTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH------------------------
T ss_pred             HHHHHHHhccccCC-----CCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc------------------------
Confidence            23334444443332     35689999999999999999999985      78888                        


Q ss_pred             cCCCccccchhhHHH
Q psy3574         218 WAHPFFKYDMSKRVA  232 (302)
Q Consensus       218 ~~hp~f~~~~~~~~~  232 (302)
                        ||||+...|....
T Consensus       319 --Hpff~~i~w~~l~  331 (396)
T 4dc2_A          319 --HPFFRNVDWDMME  331 (396)
T ss_dssp             --STTTTTCCHHHHH
T ss_pred             --CccccCCCHHHHH
Confidence              9999987775543

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=2.6e-41  Score=298.62  Aligned_cols=193  Identities=21%  Similarity=0.300  Sum_probs=167.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    +|+||||++||+|. .++....   .+++..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus        67 iv~l~~~~~~~~~~~lv~E~~~gg~L~-~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g  142 (337)
T 1o6l_A           67 LTALKYAFQTHDRLCFVMEYANGGELF-FHLSRER---VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG  142 (337)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHH-HHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             CcceEEEEEeCCEEEEEEeCCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCC
Confidence            466776665    58999999999999 7777766   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+++............+||+.|+|||++.   +..|+.++|||||||++|+|++|..||.+.+.......+..
T Consensus       143 ~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~  219 (337)
T 1o6l_A          143 HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM  219 (337)
T ss_dssp             CEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGS---SSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CEEEeeccchhhcccCCCcccccccChhhCChhhhc---CCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            999999999987544434455678999999999995   66789999999999999999999999999888888777776


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      .....     +..+++++.+||.+||..||.+||     +++++++                          ||||....
T Consensus       220 ~~~~~-----p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~--------------------------h~~f~~~~  268 (337)
T 1o6l_A          220 EEIRF-----PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME--------------------------HRFFLSIN  268 (337)
T ss_dssp             CCCCC-----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT--------------------------SGGGTTCC
T ss_pred             CCCCC-----CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc--------------------------CCCcCCCC
Confidence            54433     356899999999999999999999     8999999                          99999777


Q ss_pred             hhHH
Q psy3574         228 SKRV  231 (302)
Q Consensus       228 ~~~~  231 (302)
                      |...
T Consensus       269 ~~~~  272 (337)
T 1o6l_A          269 WQDV  272 (337)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6543

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1.5e-41  Score=301.04  Aligned_cols=193  Identities=20%  Similarity=0.287  Sum_probs=167.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    +|+||||++||+|. .++...+   .+++..++.++.||+.||+|||++||+||||||    ++.+|
T Consensus        80 iv~l~~~~~~~~~~~lv~E~~~gg~L~-~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g  155 (345)
T 1xjd_A           80 LTHMFCTFQTKENLFFVMEYLNGGDLM-YHIQSCH---KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG  155 (345)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             CCcEEEEEEeCCEEEEEEeCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCC
Confidence            567777766    58999999999999 7777766   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+++............+||+.|+|||++.   +..|+.++|||||||++|+|++|..||.+.+.......+..
T Consensus       156 ~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~  232 (345)
T 1xjd_A          156 HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILL---GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM  232 (345)
T ss_dssp             CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHT---TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CEEEeEChhhhhcccCCCcccCCCCCcccCChhhhc---CCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh
Confidence            999999999987544434456678999999999996   66789999999999999999999999999888888877777


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHH-HHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD-KLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRV  231 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~-~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~  231 (302)
                      .....     +..++.++.+||.+||..||.+||++. ++++                          ||||+...|...
T Consensus       233 ~~~~~-----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~--------------------------hp~f~~~~w~~l  281 (345)
T 1xjd_A          233 DNPFY-----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ--------------------------HPLFREINWEEL  281 (345)
T ss_dssp             CCCCC-----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG--------------------------SGGGTTCCHHHH
T ss_pred             CCCCC-----CcccCHHHHHHHHHHhcCCHhHcCCChHHHHc--------------------------CccccCCCHHHH
Confidence            54333     356899999999999999999999986 6777                          999998776544

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1.8e-40  Score=294.98  Aligned_cols=193  Identities=23%  Similarity=0.294  Sum_probs=167.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    .|+||||++||+|. .++...+   .+++..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus        83 iv~l~~~~~~~~~~~lv~E~~~gg~L~-~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g  158 (353)
T 2i0e_A           83 LTQLHSCFQTMDRLYFVMEYVNGGDLM-YHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG  158 (353)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             EeeEEEEEEcCCEEEEEEeCCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCC
Confidence            456666665    58999999999999 7777766   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+++............+||+.|+|||++.   +..|+.++|||||||++|+|++|+.||.+.+.......+..
T Consensus       159 ~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~  235 (353)
T 2i0e_A          159 HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIA---YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME  235 (353)
T ss_dssp             CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHT---TCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             cEEEEeCCcccccccCCcccccccCCccccChhhhc---CCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Confidence            999999999987544434455678999999999995   66789999999999999999999999999888888888877


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC-----HHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT-----ADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t-----~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      .....     +..++.++.+||.+||..||.+||+     ++++++                          ||||+...
T Consensus       236 ~~~~~-----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~--------------------------h~~f~~~~  284 (353)
T 2i0e_A          236 HNVAY-----PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE--------------------------HAFFRYID  284 (353)
T ss_dssp             CCCCC-----CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT--------------------------SGGGTTCC
T ss_pred             CCCCC-----CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc--------------------------CccccCCC
Confidence            65443     3568999999999999999999995     578888                          99999877


Q ss_pred             hhHH
Q psy3574         228 SKRV  231 (302)
Q Consensus       228 ~~~~  231 (302)
                      |...
T Consensus       285 w~~l  288 (353)
T 2i0e_A          285 WEKL  288 (353)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6544

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.9e-40  Score=294.09  Aligned_cols=193  Identities=21%  Similarity=0.285  Sum_probs=160.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    .|+||||++||+|. .++...+   .+++..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus        72 iv~l~~~~~~~~~~~lv~e~~~gg~L~-~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g  147 (345)
T 3a8x_A           72 LVGLHSCFQTESRLFFVIEYVNGGDLM-FHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG  147 (345)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             cCeEEEEEEeCCEEEEEEeCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCC
Confidence            567777766    59999999999999 7777666   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC---------Ch
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL---------HP  143 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~---------~~  143 (302)
                      ++||+|||+++............+||+.|+|||++.   +..|+.++|||||||++|+|++|..||...         ..
T Consensus       148 ~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~  224 (345)
T 3a8x_A          148 HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILR---GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE  224 (345)
T ss_dssp             CEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHT---TCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CH
T ss_pred             CEEEEeccccccccCCCCcccccCCCccccCccccC---CCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccH
Confidence            999999999986544334455678999999999996   667899999999999999999999999652         22


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH------HHHHHHHHHHhHHHHHHhhhCCCCCCccc
Q psy3574         144 MRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA------DKLLQVILIHRARVAAVERKGGYNQQCDI  217 (302)
Q Consensus       144 ~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~------~~ll~~l~~~~~~~~~~~~~~~~~~~~~i  217 (302)
                      ......+......     .+..++..+.+||.+||..||.+||++      .++++                        
T Consensus       225 ~~~~~~i~~~~~~-----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~------------------------  275 (345)
T 3a8x_A          225 DYLFQVILEKQIR-----IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG------------------------  275 (345)
T ss_dssp             HHHHHHHHHCCCC-----CCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT------------------------
T ss_pred             HHHHHHHHcCCCC-----CCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc------------------------
Confidence            3334444444332     235689999999999999999999995      78888                        


Q ss_pred             cCCCccccchhhHH
Q psy3574         218 WAHPFFKYDMSKRV  231 (302)
Q Consensus       218 ~~hp~f~~~~~~~~  231 (302)
                        ||||+...|...
T Consensus       276 --hp~f~~~~w~~~  287 (345)
T 3a8x_A          276 --HPFFRNVDWDMM  287 (345)
T ss_dssp             --SGGGTTCCHHHH
T ss_pred             --CCccCCCCHHHH
Confidence              999997776543

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=5e-40  Score=294.15  Aligned_cols=198  Identities=20%  Similarity=0.245  Sum_probs=167.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    +|+||||++||+|. .++....   .+++..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus       101 Iv~l~~~~~~~~~~~lv~E~~~gg~L~-~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g  176 (373)
T 2r5t_A          101 LVGLHFSFQTADKLYFVLDYINGGELF-YHLQRER---CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG  176 (373)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             CCCEEEEEEeCCEEEEEEeCCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCC
Confidence            567777766    59999999999999 7777766   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+++............+||+.|+|||++.   +..|+.++|||||||++|+|++|..||.+.+..+....+..
T Consensus       177 ~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~  253 (373)
T 2r5t_A          177 HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLH---KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN  253 (373)
T ss_dssp             CEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHT---TCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHH
T ss_pred             CEEEeeCccccccccCCCccccccCCccccCHHHhC---CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Confidence            999999999987554444556678999999999996   66799999999999999999999999999888888888877


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVA  232 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~  232 (302)
                      .....     +..++..+++||.+||..||.+|+++.+.+.                      +|++||||+...|....
T Consensus       254 ~~~~~-----~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~----------------------~i~~h~~f~~~~w~~l~  306 (373)
T 2r5t_A          254 KPLQL-----KPNITNSARHLLEGLLQKDRTKRLGAKDDFM----------------------EIKSHVFFSLINWDDLI  306 (373)
T ss_dssp             SCCCC-----CSSSCHHHHHHHHHHTCSSGGGSTTTTTTHH----------------------HHHTSGGGTTCCHHHHH
T ss_pred             cccCC-----CCCCCHHHHHHHHHHcccCHHhCCCCCCCHH----------------------HHhCCccccCCCHHHHH
Confidence            54332     3568999999999999999999999742211                      33349999987765543

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1e-39  Score=289.92  Aligned_cols=190  Identities=19%  Similarity=0.300  Sum_probs=165.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    +|+||||++||+|. +++...+   .+++..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus       103 iv~~~~~~~~~~~~~lv~e~~~gg~L~-~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g  178 (350)
T 1rdq_E          103 LVKLEFSFKDNSNLYMVMEYVAGGEMF-SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG  178 (350)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHH-HHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CCeEEEEEEcCCEEEEEEcCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCC
Confidence            466776665    58999999999999 7777766   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+++.....   ....+||+.|+|||++.   +..|+.++|||||||++|+|++|..||.+.+.......+..
T Consensus       179 ~~kL~DFg~a~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~  252 (350)
T 1rdq_E          179 YIQVTDFGFAKRVKGR---TWTLCGTPEALAPEIIL---SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS  252 (350)
T ss_dssp             CEEECCCTTCEECSSC---BCCCEECGGGCCHHHHT---TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CEEEcccccceeccCC---cccccCCccccCHHHhc---CCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHc
Confidence            9999999999876542   34568999999999996   66789999999999999999999999999988888888877


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC-----HHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT-----ADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t-----~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      .....     +..++..+.+||.+||..||.+||+     ++++++                          ||||+...
T Consensus       253 ~~~~~-----p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~--------------------------h~~f~~~~  301 (350)
T 1rdq_E          253 GKVRF-----PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN--------------------------HKWFATTD  301 (350)
T ss_dssp             CCCCC-----CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT--------------------------SGGGTTCC
T ss_pred             CCCCC-----CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh--------------------------CcCcCCCC
Confidence            65433     3568999999999999999999998     888888                          99999777


Q ss_pred             hhHH
Q psy3574         228 SKRV  231 (302)
Q Consensus       228 ~~~~  231 (302)
                      |...
T Consensus       302 w~~~  305 (350)
T 1rdq_E          302 WIAI  305 (350)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6544

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=6.6e-40  Score=287.53  Aligned_cols=191  Identities=19%  Similarity=0.341  Sum_probs=167.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    +|+||||++||+|. +++....   .+++..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus        68 Iv~~~~~~~~~~~~~lv~e~~~gg~L~-~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g  143 (318)
T 1fot_A           68 IIRMWGTFQDAQQIFMIMDYIEGGELF-SLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG  143 (318)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTS
T ss_pred             CceEeEEEEeCCEEEEEEeCCCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCC
Confidence            577777765    58999999999999 7887766   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+++....   .....+||+.|+|||++.   +..|+.++|||||||++|+|++|..||.+.+.......+..
T Consensus       144 ~~kL~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  217 (318)
T 1fot_A          144 HIKITDFGFAKYVPD---VTYTLCGTPDYIAPEVVS---TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN  217 (318)
T ss_dssp             CEEECCCSSCEECSS---CBCCCCSCTTTCCHHHHT---TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH
T ss_pred             CEEEeecCcceecCC---ccccccCCccccCHhHhc---CCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            999999999987643   234568999999999996   66789999999999999999999999999888888888877


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      .....     +..++.++.++|.+||..||.+|+     +++++++                          ||||+...
T Consensus       218 ~~~~~-----p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~--------------------------hp~f~~~~  266 (318)
T 1fot_A          218 AELRF-----PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN--------------------------HPWFKEVV  266 (318)
T ss_dssp             CCCCC-----CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT--------------------------SGGGSSCC
T ss_pred             CCCCC-----CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc--------------------------CccccCCC
Confidence            65433     356799999999999999999999     8889988                          99999877


Q ss_pred             hhHHH
Q psy3574         228 SKRVA  232 (302)
Q Consensus       228 ~~~~~  232 (302)
                      |....
T Consensus       267 ~~~~~  271 (318)
T 1fot_A          267 WEKLL  271 (318)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            65543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=1.3e-40  Score=318.73  Aligned_cols=194  Identities=23%  Similarity=0.307  Sum_probs=169.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    +||||||++||+|. .++...+   .+++..++.++.||+.||+|||++||+||||||    ++.+|
T Consensus       404 i~~l~~~~~~~~~~~lV~E~~~gg~L~-~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g  479 (674)
T 3pfq_A          404 LTQLHSCFQTMDRLYFVMEYVNGGDLM-YHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG  479 (674)
T ss_dssp             BCCEEEECBCSSEEEEEEECCCSCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSS
T ss_pred             EEEEEEEEEeCCEEEEEEeCcCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCC
Confidence            455666655    58999999999999 7777766   799999999999999999999999999999999    88999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+++............+||+.|+|||++.   ...|+.++|||||||++|||++|..||.+.+..+....+..
T Consensus       480 ~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~  556 (674)
T 3pfq_A          480 HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIA---YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME  556 (674)
T ss_dssp             CEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHT---CCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHS
T ss_pred             cEEEeecceeeccccCCcccccccCCCcccCHhhhc---CCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Confidence            999999999987554444556778999999999995   67799999999999999999999999999999888888887


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH-----HHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA-----DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~-----~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      .....+     ..++.++.+||++||..||.+|+++     +++++                          ||||+..+
T Consensus       557 ~~~~~p-----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~--------------------------h~ff~~i~  605 (674)
T 3pfq_A          557 HNVAYP-----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE--------------------------HAFFRYID  605 (674)
T ss_dssp             SCCCCC-----TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS--------------------------SGGGSSCC
T ss_pred             CCCCCC-----ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc--------------------------CccccCCC
Confidence            654433     5689999999999999999999997     77777                          99999877


Q ss_pred             hhHHH
Q psy3574         228 SKRVA  232 (302)
Q Consensus       228 ~~~~~  232 (302)
                      |..+.
T Consensus       606 w~~l~  610 (674)
T 3pfq_A          606 WEKLE  610 (674)
T ss_dssp             HHHHT
T ss_pred             HHHHH
Confidence            76544

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=3.2e-40  Score=298.63  Aligned_cols=197  Identities=23%  Similarity=0.362  Sum_probs=164.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    +|+|||||+||+|. +++...    .+++..++.++.||+.||+|||++||+||||||    ++.+|
T Consensus       131 Iv~l~~~~~~~~~~~lV~E~~~gg~L~-~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g  205 (410)
T 3v8s_A          131 VVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNY----DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG  205 (410)
T ss_dssp             BCCEEEEEECSSEEEEEECCCTTEEHH-HHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CCeEEEEEEECCEEEEEEeCCCCCcHH-HHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCC
Confidence            577777776    58999999999999 777654    499999999999999999999999999999999    88999


Q ss_pred             CEEEeccccccccccccc-cccccccCcccchhhccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERK-GGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      ++||+|||+++....... ...+.+||+.|+|||++..... ..|+.++|||||||++|+|++|+.||.+.+.......+
T Consensus       206 ~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i  285 (410)
T 3v8s_A          206 HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI  285 (410)
T ss_dssp             CEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred             CEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHH
Confidence            999999999987654322 2346789999999999963211 11789999999999999999999999999888888777


Q ss_pred             HhcC--CCCCCCCCCCCCCHHHHHHHHHhhhcCCCC--CCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccc
Q psy3574         151 SKSG--FKPPALKDKDRWSSTFHNFVKIALTKNPKK--RPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYD  226 (302)
Q Consensus       151 ~~~~--~~~~~~~~~~~~s~~~~~li~~~L~~dp~~--R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~  226 (302)
                      ....  ...+   ....++.++++||.+||..+|.+  |++++++++                          ||||+..
T Consensus       286 ~~~~~~~~~p---~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~--------------------------Hp~f~~~  336 (410)
T 3v8s_A          286 MNHKNSLTFP---DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR--------------------------HLFFKND  336 (410)
T ss_dssp             HTHHHHCCCC---TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT--------------------------SGGGCCS
T ss_pred             HhccccccCC---CcccccHHHHHHHHHHccChhhhCCCCCHHHHhc--------------------------CccccCC
Confidence            6542  2222   23468999999999999988888  999999999                          9999987


Q ss_pred             hhhHH
Q psy3574         227 MSKRV  231 (302)
Q Consensus       227 ~~~~~  231 (302)
                      .|...
T Consensus       337 ~w~~~  341 (410)
T 3v8s_A          337 QWAWE  341 (410)
T ss_dssp             SCCST
T ss_pred             CHHHH
Confidence            76543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=8.6e-40  Score=298.02  Aligned_cols=201  Identities=16%  Similarity=0.264  Sum_probs=165.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.|.    +|+|||||+||+|. .++.. .+   .+++..++.++.||+.||.|||++||+||||||    ++.+
T Consensus       136 Iv~l~~~~~~~~~~~lV~Ey~~gg~L~-~~l~~~~~---~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~  211 (437)
T 4aw2_A          136 ITTLHYAFQDDNNLYLVMDYYVGGDLL-TLLSKFED---RLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMN  211 (437)
T ss_dssp             BCCEEEEEECSSEEEEEECCCTTCBHH-HHHHTTTT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             EEEEEEEEeeCCEEEEEEecCCCCcHH-HHHHHccC---CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCC
Confidence            466777665    58999999999999 77766 44   799999999999999999999999999999999    8899


Q ss_pred             CCEEEeccccccccccccc-cccccccCcccchhhccccc--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q psy3574          72 GDVKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF  148 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  148 (302)
                      |++||+|||+|+....... .....+||+.|+|||++...  ....|+.++|||||||++|+|++|+.||.+.+..+...
T Consensus       212 g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~  291 (437)
T 4aw2_A          212 GHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG  291 (437)
T ss_dssp             SCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred             CCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHH
Confidence            9999999999977654322 23346899999999998522  13458899999999999999999999999998888887


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCC--CCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccc
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK--RPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYD  226 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~--R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~  226 (302)
                      .+...............+++++++||++||..+|++  |++++++++                          ||||++.
T Consensus       292 ~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~--------------------------Hpff~~i  345 (437)
T 4aw2_A          292 KIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK--------------------------HPFFSGI  345 (437)
T ss_dssp             HHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT--------------------------SGGGTTC
T ss_pred             hhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC--------------------------CCccCCC
Confidence            776532111111223558999999999999888888  999999999                          9999988


Q ss_pred             hhhHH
Q psy3574         227 MSKRV  231 (302)
Q Consensus       227 ~~~~~  231 (302)
                      .|..+
T Consensus       346 ~w~~l  350 (437)
T 4aw2_A          346 DWDNI  350 (437)
T ss_dssp             CTTTG
T ss_pred             CHHHH
Confidence            88765

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=2.1e-39  Score=281.73  Aligned_cols=183  Identities=33%  Similarity=0.568  Sum_probs=159.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    .|+||||++||+|. +++...    .+++..++.++.|++.||.|||++||+||||||    ++.++
T Consensus        79 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~  153 (297)
T 3fxz_A           79 IVNYLDSYLVGDELWVVMEYLAGGSLT-DVVTET----CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG  153 (297)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTCBHH-HHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             CCeEeEEEEECCEEEEEEECCCCCCHH-HHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCC
Confidence            577777665    58999999999999 777665    499999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++.............+||+.|+|||++.   +..++.++|||||||++|+|++|..||.+.+.......+..
T Consensus       154 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~  230 (297)
T 3fxz_A          154 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT---RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT  230 (297)
T ss_dssp             CEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHH---CSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             CEEEeeCCCceecCCcccccCCccCCcCccChhhhc---CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            999999999987766545555678999999999995   66789999999999999999999999999888877776665


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....  ....+..++..+.+||.+||..||.+|||+.++++
T Consensus       231 ~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          231 NGTP--ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             HCSC--CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCC--CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            5432  23335678999999999999999999999999999

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=3.6e-39  Score=295.57  Aligned_cols=193  Identities=21%  Similarity=0.304  Sum_probs=165.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh-CCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK-SGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.|.    .|+||||++||+|. .++....   .+++..++.++.||+.||+|||+ +||+||||||    ++.+
T Consensus       210 iv~l~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~  285 (446)
T 4ejn_A          210 LTALKYSFQTHDRLCFVMEYANGGELF-FHLSRER---VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD  285 (446)
T ss_dssp             SCCEEEEEEETTEEEEEECCCSSCBHH-HHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSS
T ss_pred             EeeEEEEEeeCCEEEEEEeeCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCC
Confidence            466666665    58999999999999 7777766   79999999999999999999998 9999999999    8889


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +.+||+|||+++............+||+.|+|||++.   +..|+.++|||||||++|+|++|+.||.+.+.......+.
T Consensus       286 ~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  362 (446)
T 4ejn_A          286 GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL  362 (446)
T ss_dssp             SCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHH---TSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CCEEEccCCCceeccCCCcccccccCCccccCHhhcC---CCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHH
Confidence            9999999999987554444455678999999999995   6779999999999999999999999999988888888877


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccc
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYD  226 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~  226 (302)
                      ......     +..+++++.+||.+||..||.+||     +++++++                          ||||...
T Consensus       363 ~~~~~~-----p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~--------------------------hp~f~~~  411 (446)
T 4ejn_A          363 MEEIRF-----PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ--------------------------HRFFAGI  411 (446)
T ss_dssp             HCCCCC-----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT--------------------------SGGGTTC
T ss_pred             hCCCCC-----CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh--------------------------CccccCC
Confidence            765443     356799999999999999999999     9999999                          9999977


Q ss_pred             hhhHH
Q psy3574         227 MSKRV  231 (302)
Q Consensus       227 ~~~~~  231 (302)
                      .|...
T Consensus       412 ~~~~~  416 (446)
T 4ejn_A          412 VWQHV  416 (446)
T ss_dssp             CHHHH
T ss_pred             CHHHH
Confidence            66544

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2.9e-39  Score=284.63  Aligned_cols=180  Identities=22%  Similarity=0.278  Sum_probs=157.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. +++...+   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        76 Iv~l~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~  151 (328)
T 3fe3_A           76 IVKLFEVIETEKTLYLIMEYASGGEVF-DYLVAHG---RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADM  151 (328)
T ss_dssp             BCCEEEEEECSSEEEEEECCCTTCBHH-HHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             EeeEEEEEEECCEEEEEEECCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCC
Confidence            467777654    58999999999999 7777666   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      .+||+|||++...... ......+||+.|+|||++.   +..+ +.++||||+||++|+|++|+.||.+.+.......+.
T Consensus       152 ~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  227 (328)
T 3fe3_A          152 NIKIADFGFSNEFTVG-GKLDAFCGAPPYAAPELFQ---GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL  227 (328)
T ss_dssp             CEEECSTTCCGGGSSS-CGGGTTSSSGGGCCHHHHH---TCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CEEEeeccCceecCCC-CccccccCCcceeCccccc---CCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            9999999999876543 3345678999999999996   4444 589999999999999999999999999888888887


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ......|     ..+++++.+||++||..||.+|||++++++
T Consensus       228 ~~~~~~p-----~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          228 RGKYRIP-----FYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             HCCCCCC-----TTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             hCCCCCC-----CCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            7655433     457999999999999999999999999999

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=6e-39  Score=282.57  Aligned_cols=193  Identities=21%  Similarity=0.256  Sum_probs=161.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    .|+||||++||+|. +++...+   .+++..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus        83 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~  158 (327)
T 3a62_A           83 IVDLIYAFQTGGKLYLILEYLSGGELF-MQLEREG---IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG  158 (327)
T ss_dssp             BCCEEEEEECSSCEEEEEECCTTEEHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTS
T ss_pred             ccceeEEEEcCCEEEEEEeCCCCCcHH-HHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCC
Confidence            567777665    59999999999999 7777666   799999999999999999999999999999999    78899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+++............+||+.|+|||++.   +..++.++|||||||++|+|++|..||.+.+.......+..
T Consensus       159 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  235 (327)
T 3a62_A          159 HVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILM---RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK  235 (327)
T ss_dssp             CEEECCCSCC----------CTTSSCCTTSCHHHHT---TSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             cEEEEeCCcccccccCCccccccCCCcCccCHhhCc---CCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            999999999986554434445668999999999996   66789999999999999999999999999888888877777


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      .....     +..++..+.+||.+||..||.+||     ++.++++                          ||||+...
T Consensus       236 ~~~~~-----p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~--------------------------hp~f~~~~  284 (327)
T 3a62_A          236 CKLNL-----PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA--------------------------HPFFRHIN  284 (327)
T ss_dssp             TCCCC-----CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH--------------------------SGGGSSCC
T ss_pred             CCCCC-----CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc--------------------------CCcccCCC
Confidence            54433     356799999999999999999999     8899999                          99999776


Q ss_pred             hhHH
Q psy3574         228 SKRV  231 (302)
Q Consensus       228 ~~~~  231 (302)
                      |...
T Consensus       285 ~~~~  288 (327)
T 3a62_A          285 WEEL  288 (327)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6543

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=4.7e-39  Score=288.62  Aligned_cols=196  Identities=20%  Similarity=0.300  Sum_probs=163.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    .|+||||+.||+|. .++....   .+++..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus        77 Iv~l~~~~~~~~~~~lv~e~~~gg~L~-~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g  152 (384)
T 4fr4_A           77 LVNLWYSFQDEEDMFMVVDLLLGGDLR-YHLQQNV---HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHG  152 (384)
T ss_dssp             BCCEEEEEECSSEEEEEECCCTTEEHH-HHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CCcEEEEEEeCCEEEEEEecCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCC
Confidence            567777776    58999999999999 8888776   799999999999999999999999999999999    88999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC---ChHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL---HPMRALFL  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~---~~~~~~~~  149 (302)
                      ++||+|||+++..... ......+||+.|+|||++....+..|+.++|||||||++|+|++|..||...   ........
T Consensus       153 ~vkL~DFG~a~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~  231 (384)
T 4fr4_A          153 HVHITDFNIAAMLPRE-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHT  231 (384)
T ss_dssp             CEEECCCTTCEECCTT-CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHH
T ss_pred             CEEEeccceeeeccCC-CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHH
Confidence            9999999999876543 3445678999999999996433456899999999999999999999999743   33344444


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC-HHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchh
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT-ADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMS  228 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t-~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~  228 (302)
                      +......     .+..++..+.+||.+||..||.+||+ ++++++                          ||||+...|
T Consensus       232 ~~~~~~~-----~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~--------------------------hp~f~~~~w  280 (384)
T 4fr4_A          232 FETTVVT-----YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN--------------------------FPYMNDINW  280 (384)
T ss_dssp             HHHCCCC-----CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT--------------------------SGGGTTCCH
T ss_pred             HhhcccC-----CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc--------------------------ChhhhcCCH
Confidence            4443322     23568999999999999999999998 888888                          999998877


Q ss_pred             hHHH
Q psy3574         229 KRVA  232 (302)
Q Consensus       229 ~~~~  232 (302)
                      ....
T Consensus       281 ~~~~  284 (384)
T 4fr4_A          281 DAVF  284 (384)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6554

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=3.9e-39  Score=287.23  Aligned_cols=184  Identities=20%  Similarity=0.268  Sum_probs=157.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    +|+||||++||+|. +++...+   .+++..++.++.||+.||.|||++||+||||||    ++..+
T Consensus        77 Iv~l~~~~~~~~~~~lv~e~~~gg~L~-~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~  152 (361)
T 2yab_A           77 IITLHDVYENRTDVVLILELVSGGELF-DFLAQKE---SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN  152 (361)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHH-HHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTT
T ss_pred             CCcEEEEEEeCCEEEEEEEcCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCC
Confidence            567777765    59999999999999 7887766   799999999999999999999999999999999    44444


Q ss_pred             ----CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q psy3574          73 ----DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF  148 (302)
Q Consensus        73 ----~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  148 (302)
                          .+||+|||++...... ......+||+.|+|||++.   +..|+.++|||||||++|+|++|..||.+.+......
T Consensus       153 ~~~~~vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~  228 (361)
T 2yab_A          153 IPIPHIKLIDFGLAHEIEDG-VEFKNIFGTPEFVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA  228 (361)
T ss_dssp             SSSCCEEECCCSSCEECCTT-CCCCCCCSCGGGCCHHHHT---TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH
T ss_pred             CCccCEEEEecCCceEcCCC-CccccCCCCccEECchHHc---CCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                7999999999876653 2344568999999999995   6678999999999999999999999999998888888


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+.......+. ..+..++..+++||.+||..||.+|||+.++++
T Consensus       229 ~i~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          229 NITAVSYDFDE-EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             HHHTTCCCCCH-HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHhcCCCCCc-hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            87776544332 123567999999999999999999999999999

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.5e-38  Score=290.70  Aligned_cols=185  Identities=23%  Similarity=0.332  Sum_probs=160.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC---
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD---   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~---   69 (302)
                      ||++++.+.    .|+|||||.||+|. +.+....   .+++..+..++.||+.||.|||++||+||||||    ++   
T Consensus        72 Iv~l~~~~~~~~~~~lv~E~~~gg~L~-~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~  147 (444)
T 3soa_A           72 IVRLHDSISEEGHHYLIFDLVTGGELF-EDIVARE---YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKL  147 (444)
T ss_dssp             BCCEEEEEECSSEEEEEECCCBCCBHH-HHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSS
T ss_pred             CCeEEEEEEECCEEEEEEEeCCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccC
Confidence            577777765    58999999999999 6666666   799999999999999999999999999999999    33   


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      .++.+||+|||++.............+||+.|+|||++.   +..|+.++|||||||++|+|++|.+||.+.+.......
T Consensus       148 ~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~  224 (444)
T 3soa_A          148 KGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR---KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQ  224 (444)
T ss_dssp             TTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHT---TCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             CCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhc---CCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence            568999999999987766544455678999999999995   66789999999999999999999999999988888888


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+. ..+..+++++.+||.+||..||.+|||+.++|+
T Consensus       225 i~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          225 IKAGAYDFPS-PEWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             HHHTCCCCCT-TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHhCCCCCCc-cccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            8776655443 233568999999999999999999999999999

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.7e-39  Score=292.74  Aligned_cols=199  Identities=21%  Similarity=0.327  Sum_probs=162.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|+    +|+||||++||+|. .++...+  ..+++..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus       123 Iv~l~~~~~~~~~~~lVmE~~~gg~L~-~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g  199 (412)
T 2vd5_A          123 ITQLHFAFQDENYLYLVMEYYVGGDLL-TLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCG  199 (412)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             eeeEEEEEeeCCEEEEEEcCCCCCcHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCC
Confidence            567777666    58999999999999 6666532  2699999999999999999999999999999999    88999


Q ss_pred             CEEEeccccccccccccc-cccccccCcccchhhcccccc----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy3574          73 DVKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVER----KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRAL  147 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  147 (302)
                      ++||+|||+++....... .....+||+.|+|||++....    ...|+.++|||||||++|+|++|+.||.+.+..+..
T Consensus       200 ~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~  279 (412)
T 2vd5_A          200 HIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETY  279 (412)
T ss_dssp             CEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH
T ss_pred             CEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHH
Confidence            999999999987654322 233568999999999986211    245889999999999999999999999998888877


Q ss_pred             HHHHhcC--CCCCCCCCCCCCCHHHHHHHHHhhhcCCCCC---CCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCc
Q psy3574         148 FLMSKSG--FKPPALKDKDRWSSTFHNFVKIALTKNPKKR---PTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPF  222 (302)
Q Consensus       148 ~~i~~~~--~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R---~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~  222 (302)
                      ..+....  ...+.  ....++.++++||++||. +|.+|   ++++++++                          |||
T Consensus       280 ~~i~~~~~~~~~p~--~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~--------------------------Hpf  330 (412)
T 2vd5_A          280 GKIVHYKEHLSLPL--VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT--------------------------HPF  330 (412)
T ss_dssp             HHHHTHHHHCCCC------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT--------------------------SGG
T ss_pred             HHHHhcccCcCCCc--cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc--------------------------CCC
Confidence            7776532  22221  235689999999999999 99998   48999999                          999


Q ss_pred             cccchhhHH
Q psy3574         223 FKYDMSKRV  231 (302)
Q Consensus       223 f~~~~~~~~  231 (302)
                      |+...|...
T Consensus       331 f~~i~w~~l  339 (412)
T 2vd5_A          331 FFGLDWDGL  339 (412)
T ss_dssp             GTTCCSTTS
T ss_pred             cCCCCHHHH
Confidence            998887654

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=2.5e-39  Score=281.67  Aligned_cols=191  Identities=14%  Similarity=0.071  Sum_probs=141.9

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC--------CCCCCC
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS--------GFKPPA   64 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~--------~i~Hrd   64 (302)
                      ||++++.+.        +|||||||+||+|. ++++..    ++++..+..++.|++.||+|||++        +|+|||
T Consensus        59 Iv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~-~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRD  133 (303)
T 3hmm_A           59 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLF-DYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD  133 (303)
T ss_dssp             BCCEEEEEEEECSSSEEEEEEEECCTTCBHH-HHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSC
T ss_pred             CCcEEEEEEecCCCceEEEEEecCCCCCcHH-HHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeecc
Confidence            678888764        58999999999999 888765    489999999999999999999987        999999


Q ss_pred             CcC----CCCCCCEEEeccccccccccccc----cccccccCcccchhhcccccc---cCCCCchhhHHHHHHHHHHHHh
Q psy3574          65 LKD----KDRCGDVKLADFGVSAQITATIN----KRKSFIGTPYWMAPEVAAVER---KGGYNQQCDIWAVGITAIELAE  133 (302)
Q Consensus        65 lkp----~~~~~~ikL~DFg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~---~~~~~~~~DiwslG~il~ell~  133 (302)
                      |||    ++.++++||+|||+|+.......    .....+||+.|||||++.+..   ...|+.++|||||||++|||+|
T Consensus       134 lKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~t  213 (303)
T 3hmm_A          134 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR  213 (303)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHH
Confidence            999    88999999999999987654322    123457999999999996321   1136789999999999999999


Q ss_pred             CCCCCCCC---------------ChHHHHHHHHhcCCCCCCCCC--CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         134 LQPPMFDL---------------HPMRALFLMSKSGFKPPALKD--KDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       134 g~~pf~~~---------------~~~~~~~~i~~~~~~~~~~~~--~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      |.+||...               ........+......++....  ....+..+.+|+.+||..||++|||+.++++.|-
T Consensus       214 g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  293 (303)
T 3hmm_A          214 RCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS  293 (303)
T ss_dssp             TBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence            97765321               112222233333322221111  1123457889999999999999999999998553

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=6.6e-38  Score=275.22  Aligned_cols=183  Identities=34%  Similarity=0.576  Sum_probs=156.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. +++...    .+++..+..++.||+.||.|||++||+||||||    ++.++
T Consensus       104 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~  178 (321)
T 2c30_A          104 VVEMYKSYLVGEELWVLMEFLQGGALT-DIVSQV----RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG  178 (321)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCSCBHH-HHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             cceEEEEEEECCEEEEEEecCCCCCHH-HHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence            466777655    48999999999999 777643    599999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............||+.|+|||++.   +..++.++|||||||++|+|++|..||...........+..
T Consensus       179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~  255 (321)
T 2c30_A          179 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVIS---RSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD  255 (321)
T ss_dssp             CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHT---TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             cEEEeeeeeeeecccCccccccccCCccccCHhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence            999999999987765444445668999999999995   66689999999999999999999999998888777766655


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..  .+.......++..+.+||.+||..||++|||+.++++
T Consensus       256 ~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          256 SP--PPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             SS--CCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CC--CCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            43  2233334567899999999999999999999999999

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.2e-38  Score=276.44  Aligned_cols=184  Identities=22%  Similarity=0.296  Sum_probs=156.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. +++....   .+++..++.++.||+.||.|||++||+||||||    ++.++
T Consensus        76 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~  151 (326)
T 2y0a_A           76 VITLHEVYENKTDVILILELVAGGELF-DFLAEKE---SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN  151 (326)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHH-HHHTTSS---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSS
T ss_pred             CCcEEEEEEeCCEEEEEEEcCCCCCHH-HHHHhcC---CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCC
Confidence            467777665    58999999999999 8887666   799999999999999999999999999999999    55555


Q ss_pred             ----CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q psy3574          73 ----DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF  148 (302)
Q Consensus        73 ----~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  148 (302)
                          .+||+|||+++..... ......+||+.|+|||++.   ...++.++|||||||++|+|++|..||.+........
T Consensus       152 ~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  227 (326)
T 2y0a_A          152 VPKPRIKIIDFGLAHKIDFG-NEFKNIFGTPEFVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA  227 (326)
T ss_dssp             SSSCCEEECCCTTCEECCTT-SCCCCCCSCTTTCCHHHHT---TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH
T ss_pred             CCCCCEEEEECCCCeECCCC-CccccccCCcCcCCceeec---CCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH
Confidence                8999999999876543 2334567999999999985   6678999999999999999999999999988888777


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+.......+. .....++..+.+||.+||..||.+|||+.++++
T Consensus       228 ~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          228 NVSAVNYEFED-EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             HHHHTCCCCCH-HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHhcCCCcCc-cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            77665443321 123467899999999999999999999999999

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=5.3e-38  Score=280.24  Aligned_cols=184  Identities=24%  Similarity=0.364  Sum_probs=156.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC---
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD---   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~---   69 (302)
                      ||++++.+.    .|+||||+.||+|. +.+....   .+++..+..++.||+.||.|||++||+||||||    ++   
T Consensus        90 Iv~~~~~~~~~~~~~lv~e~~~gg~L~-~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~  165 (362)
T 2bdw_A           90 IVRLHDSIQEESFHYLVFDLVTGGELF-EDIVARE---FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA  165 (362)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHTTCS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSS
T ss_pred             CCeEEEEEEeCCEEEEEEecCCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC
Confidence            577777665    58999999999999 6676665   799999999999999999999999999999999    33   


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      .++.+||+|||++...... ......+||+.|+|||++.   +..|+.++|||||||++|+|++|..||.+.+.......
T Consensus       166 ~~~~~kl~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~  241 (362)
T 2bdw_A          166 KGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPEVLK---KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ  241 (362)
T ss_dssp             TTCCEEECCCTTCBCCTTC-CSCCCSCSCTTTCCHHHHT---TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCCEEEeecCcceEecCC-cccccCCCCccccCHHHHc---cCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence            3467999999999876643 3334568999999999995   66789999999999999999999999999888888877


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+. ..+..++.++.+||.+||..||.+||++.++++
T Consensus       242 i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          242 IKAGAYDYPS-PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             HHHTCCCCCT-TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHhCCCCCCc-ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            7776554433 223567999999999999999999999999999

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=6.6e-38  Score=291.87  Aligned_cols=197  Identities=21%  Similarity=0.278  Sum_probs=161.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc-ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI-TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.|.    +|+||||++||+|. .++.... ....+++..++.++.||+.||.|||++||+||||||    ++.+
T Consensus       247 Iv~l~~~~~~~~~l~lVmE~~~gg~L~-~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~  325 (543)
T 3c4z_A          247 IVSLAYAFETKTDLCLVMTIMNGGDIR-YHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD  325 (543)
T ss_dssp             BCCEEEEEECSSEEEEEECCCTTCBHH-HHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred             EeeEEEEEeeCCEEEEEEEeccCCCHH-HHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCC
Confidence            466776665    58999999999999 6665432 123699999999999999999999999999999999    8899


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----hHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH----PMRAL  147 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~~  147 (302)
                      |++||+|||+++............+||+.|+|||++.   +..|+.++|||||||++|+|++|..||.+..    .....
T Consensus       326 g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~  402 (543)
T 3c4z_A          326 GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL---GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK  402 (543)
T ss_dssp             SCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHT---TCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHH
T ss_pred             CCEEEeecceeeeccCCCcccccccCCccccChhhhc---CCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHH
Confidence            9999999999987765544445568999999999996   6678999999999999999999999997653    34455


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCH-----HHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCc
Q psy3574         148 FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA-----DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPF  222 (302)
Q Consensus       148 ~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~-----~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~  222 (302)
                      ..+......     .+..++..+.+||.+||..||.+||++     +++++                          |||
T Consensus       403 ~~i~~~~~~-----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~--------------------------Hpf  451 (543)
T 3c4z_A          403 QRVLEQAVT-----YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT--------------------------HPL  451 (543)
T ss_dssp             HHHHHCCCC-----CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT--------------------------SGG
T ss_pred             HHHhhcccC-----CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc--------------------------Ccc
Confidence            555554332     236689999999999999999999964     67777                          999


Q ss_pred             cccchhhHHH
Q psy3574         223 FKYDMSKRVA  232 (302)
Q Consensus       223 f~~~~~~~~~  232 (302)
                      |+...|....
T Consensus       452 f~~i~w~~l~  461 (543)
T 3c4z_A          452 FRDISWRQLE  461 (543)
T ss_dssp             GTTCCHHHHH
T ss_pred             ccCCCHHHHH
Confidence            9987775443

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=5.5e-38  Score=274.51  Aligned_cols=187  Identities=17%  Similarity=0.193  Sum_probs=148.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++ +|. +++....  ..+++..++.++.||+.||.|||++||+||||||    ++.++
T Consensus        81 iv~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~  156 (311)
T 3niz_A           81 IVSLIDVIHSERCLTLVFEFMEK-DLK-KVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG  156 (311)
T ss_dssp             BCCEEEEECCSSCEEEEEECCSE-EHH-HHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             EeeeeeEEccCCEEEEEEcCCCC-CHH-HHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCC
Confidence            567777665    4899999986 777 5554433  2699999999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+++............+||+.|+|||++.  ....++.++|||||||++|+|++|+.||.+.........+..
T Consensus       157 ~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~  234 (311)
T 3niz_A          157 ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLM--GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFS  234 (311)
T ss_dssp             CEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHT--TCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHH
T ss_pred             CEEEccCcCceecCCCcccccCCcccCCcCCHHHhc--CCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            999999999987765444445567899999999986  235589999999999999999999999987766655555443


Q ss_pred             cCCCCCCC-------------------------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPAL-------------------------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~-------------------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+...                         .....+++++.+||.+||..||.+|||+.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          235 ILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             HHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            21111110                         012346789999999999999999999999999

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=3.5e-38  Score=279.25  Aligned_cols=185  Identities=21%  Similarity=0.260  Sum_probs=153.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-----~~~~   71 (302)
                      ||++++.|.    .|+|||||+||+|. +.+....   .+++..++.++.||+.||+|||++||+||||||     .+.+
T Consensus        78 iv~~~~~~~~~~~~~lv~E~~~gg~L~-~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~  153 (342)
T 2qr7_A           78 IITLKDVYDDGKYVYVVTELMKGGELL-DKILRQK---FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDES  153 (342)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSS
T ss_pred             cCeEEEEEEcCCEEEEEEeCCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCC
Confidence            567777766    48999999999999 7777666   799999999999999999999999999999999     2222


Q ss_pred             ---CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCC---CChHH
Q psy3574          72 ---GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFD---LHPMR  145 (302)
Q Consensus        72 ---~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~---~~~~~  145 (302)
                         +.+||+|||+++............+||+.|+|||++.   +..|+.++|||||||++|+|++|..||.+   ....+
T Consensus       154 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  230 (342)
T 2qr7_A          154 GNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLE---RQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEE  230 (342)
T ss_dssp             CSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHH
T ss_pred             CCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhc---CCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHH
Confidence               4599999999987765544455678999999999995   45588999999999999999999999975   34555


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+.......+ ...+..++.++.+||.+||..||.+||++.++++
T Consensus       231 ~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          231 ILARIGSGKFSLS-GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             HHHHHHHCCCCCC-STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHccCCcccC-ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            6666666544332 2234678999999999999999999999999999

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=4.1e-38  Score=286.26  Aligned_cols=205  Identities=24%  Similarity=0.289  Sum_probs=153.5

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C---CC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K---DR   70 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~---~~   70 (302)
                      ||++++.+.   +|+||||+++|+|. +++....   .+++..++.++.||+.||+|||++||+||||||    +   +.
T Consensus       202 iv~l~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~  277 (419)
T 3i6u_A          202 IIKIKNFFDAEDYYIVLELMEGGELF-DKVVGNK---RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE  277 (419)
T ss_dssp             BCCCCEEEESSEEEEEEECCTTCBGG-GGTSSSC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSS
T ss_pred             EeeEEEEEecCceEEEEEcCCCCcHH-HHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCC
Confidence            466666554   58999999999999 6666655   799999999999999999999999999999999    4   34


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      ++.+||+|||+++..... ......+||+.|+|||++.+.....|+.++|||||||++|+|++|..||............
T Consensus       278 ~~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~  356 (419)
T 3i6u_A          278 DCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ  356 (419)
T ss_dssp             SCCEEECCSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHH
T ss_pred             cceEEEeecccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHH
Confidence            556999999999876543 3344568999999999986433566889999999999999999999999765443333222


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKR  230 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~  230 (302)
                      ............+..++..+.+||.+||..||.+|||+.++++                          ||||+......
T Consensus       357 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~--------------------------hp~~~~~~~~~  410 (419)
T 3i6u_A          357 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR--------------------------HPWLQDEDMKR  410 (419)
T ss_dssp             HHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH--------------------------SGGGCCHHHHH
T ss_pred             HhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC--------------------------CcccCChhHHH
Confidence            2222222111223567999999999999999999999999999                          99999877766


Q ss_pred             HHHHHh
Q psy3574         231 VAIELL  236 (302)
Q Consensus       231 ~~~~~~  236 (302)
                      ....++
T Consensus       411 ~~~~ll  416 (419)
T 3i6u_A          411 KFQDLL  416 (419)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            555444

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=3.3e-37  Score=268.98  Aligned_cols=186  Identities=21%  Similarity=0.190  Sum_probs=153.1

Q ss_pred             Cchhhhcc---------hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----
Q psy3574           1 MSRVFNHF---------LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----   67 (302)
Q Consensus         1 iv~~~~~~---------~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----   67 (302)
                      ||++++.+         ..|+||||+.+ +|. +++.... ...+++..++.++.||+.||+|||++||+||||||    
T Consensus        76 iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~-~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil  152 (308)
T 3g33_A           76 VVRLMDVCATSRTDREIKVTLVFEHVDQ-DLR-TYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENIL  152 (308)
T ss_dssp             BCCEEEEEEECCSSSEEEEEEEEECCCC-BHH-HHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEE
T ss_pred             eEEeeeeeeccCCCCceeEEEEehhhhc-CHH-HHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence            46666655         35899999985 999 7776654 12399999999999999999999999999999999    


Q ss_pred             CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy3574          68 KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRAL  147 (302)
Q Consensus        68 ~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  147 (302)
                      ++.++.+||+|||+++..... ......+||+.|+|||++.   +..++.++|||||||++|+|++|++||.+.......
T Consensus       153 ~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~  228 (308)
T 3g33_A          153 VTSGGTVKLADFGLARIYSYQ-MALTPVVVTLWYRAPEVLL---QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL  228 (308)
T ss_dssp             ECTTSCEEECSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHH---TSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHH
T ss_pred             EcCCCCEEEeeCccccccCCC-cccCCccccccccCchHHc---CCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            788999999999999876543 3334567999999999995   667899999999999999999999999998888877


Q ss_pred             HHHHhcCCCCCCCC----------------------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         148 FLMSKSGFKPPALK----------------------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~~~~~~----------------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+......++...                      ....++..+.+||.+||..||.+|||+.++|+
T Consensus       229 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          229 GKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             HHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            77655322222110                      11357899999999999999999999999999

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2e-38  Score=278.56  Aligned_cols=185  Identities=18%  Similarity=0.234  Sum_probs=156.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC--
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR--   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~--   70 (302)
                      ||++++.+.    .|+|||||+||+|. +++....  ..+++..+..++.||+.||.|||++||+||||||    ++.  
T Consensus        63 Iv~~~~~~~~~~~~~lv~e~~~g~~L~-~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~  139 (321)
T 1tki_A           63 ILHLHESFESMEELVMIFEFISGLDIF-ERINTSA--FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRR  139 (321)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCCCBHH-HHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS
T ss_pred             CCeEeEEEecCCEEEEEEEeCCCCCHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCC
Confidence            567777665    58999999999999 6665432  2699999999999999999999999999999999    443  


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      ++.+||+|||++...... .......||+.|+|||++.   +..++.++|||||||++|+|++|..||.+.........+
T Consensus       140 ~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i  215 (321)
T 1tki_A          140 SSTIKIIEFGQARQLKPG-DNFRLLFTAPEYYAPEVHQ---HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI  215 (321)
T ss_dssp             CCCEEECCCTTCEECCTT-CEEEEEESCGGGSCHHHHT---TCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred             CCCEEEEECCCCeECCCC-CccccccCChhhcCcHHhc---CCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHH
Confidence            789999999999876543 2334567999999999995   555789999999999999999999999998888888888


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .......+. .....++.++.+||.+||..||.+|||+.++++
T Consensus       216 ~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          216 MNAEYTFDE-EAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHTCCCCCH-HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HcCCCCCCh-hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            776544332 123467999999999999999999999999999

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=1e-37  Score=279.43  Aligned_cols=185  Identities=22%  Similarity=0.261  Sum_probs=156.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C--CC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K--DR   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~--~~   70 (302)
                      ||++++.+.    .|+||||++||+|.+.+.....   .+++..++.++.||+.||.|||++||+||||||    +  +.
T Consensus       148 Iv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  224 (373)
T 2x4f_A          148 LIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESY---NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRD  224 (373)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETT
T ss_pred             CCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCC
Confidence            567777665    4899999999999944444444   799999999999999999999999999999999    3  56


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      .+.+||+|||+++..... ......+||+.|+|||++.   ...++.++|||||||++|+|++|..||.+.+.......+
T Consensus       225 ~~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i  300 (373)
T 2x4f_A          225 AKQIKIIDFGLARRYKPR-EKLKVNFGTPEFLAPEVVN---YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNI  300 (373)
T ss_dssp             TTEEEECCCSSCEECCTT-CBCCCCCSSCTTCCHHHHT---TCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred             CCcEEEEeCCCceecCCc-cccccccCCCcEeChhhcc---CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            789999999999876544 2334557999999999985   566899999999999999999999999999888888887


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .......+. .....++.++.+||.+||..||.+|||+.++++
T Consensus       301 ~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          301 LACRWDLED-EEFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             HHTCCCSCS-GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HhccCCCCh-hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            776544332 223568999999999999999999999999999

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.7e-37  Score=268.34  Aligned_cols=187  Identities=20%  Similarity=0.261  Sum_probs=147.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+.+ +|. +++....  ..+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        62 iv~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  137 (288)
T 1ob3_A           62 IVKLYDVIHTKKRLVLVFEHLDQ-DLK-KLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG  137 (288)
T ss_dssp             BCCEEEEEECSSCEEEEEECCSE-EHH-HHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             EeeeeeEEccCCeEEEEEEecCC-CHH-HHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            567777665    5899999987 888 6666532  2699999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............||+.|+|||++.  ....++.++|||||||++|+|++|..||.+.........+..
T Consensus       138 ~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~  215 (288)
T 1ob3_A          138 ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLM--GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR  215 (288)
T ss_dssp             CEEECCTTHHHHHCC---------CCCTTCCHHHHT--TCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CEEEeECccccccCccccccccccccccccCchhee--CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            999999999987654433444557899999999985  234589999999999999999999999998887776666544


Q ss_pred             cCCCCCC------------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPA------------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+..                        ......++..+.+||.+||..||++|||+.++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          216 ILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             HHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            2111100                        0112457899999999999999999999999999

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=1.1e-37  Score=291.38  Aligned_cols=195  Identities=20%  Similarity=0.244  Sum_probs=160.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    +|+||||++||+|. .++...+ ...+++..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus       246 Iv~l~~~~~~~~~l~lVmEy~~gg~L~-~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g  323 (576)
T 2acx_A          246 VVSLAYAYETKDALCLVLTLMNGGDLK-FHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHG  323 (576)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS
T ss_pred             EeeEEEEEeeCCEEEEEEEcCCCCcHH-HHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCC
Confidence            567777665    59999999999999 7776544 12499999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----hHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH----PMRALF  148 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~~~  148 (302)
                      ++||+|||+++..... ......+||+.|+|||++.   +..|+.++|||||||++|+|++|..||.+..    ......
T Consensus       324 ~vKL~DFGla~~~~~~-~~~~~~~GT~~Y~APEvl~---~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~  399 (576)
T 2acx_A          324 HIRISDLGLAVHVPEG-QTIKGRVGTVGYMAPEVVK---NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER  399 (576)
T ss_dssp             CEEECCCTTCEECCTT-CCEECCCSCGGGCCHHHHT---TCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHH
T ss_pred             CeEEEecccceecccC-ccccccCCCccccCHHHHc---CCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHH
Confidence            9999999999876543 2334568999999999996   5668999999999999999999999998653    233334


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCcc
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFF  223 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f  223 (302)
                      .+......     .+..++.++++||.+||..||.+||     +++++++                          ||||
T Consensus       400 ~i~~~~~~-----~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~--------------------------HpfF  448 (576)
T 2acx_A          400 LVKEVPEE-----YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE--------------------------HPLF  448 (576)
T ss_dssp             HHHHCCCC-----CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT--------------------------SGGG
T ss_pred             Hhhccccc-----CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh--------------------------Chhh
Confidence            44433222     2366899999999999999999999     7899999                          9999


Q ss_pred             ccchhhHHH
Q psy3574         224 KYDMSKRVA  232 (302)
Q Consensus       224 ~~~~~~~~~  232 (302)
                      +...|....
T Consensus       449 ~~i~w~~l~  457 (576)
T 2acx_A          449 KKLNFKRLG  457 (576)
T ss_dssp             TTCCHHHHH
T ss_pred             ccCCHHHHh
Confidence            987776554

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=1e-37  Score=277.38  Aligned_cols=188  Identities=20%  Similarity=0.267  Sum_probs=150.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC--
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR--   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~--   70 (302)
                      ||++++.+.    .|+|||||+||+|.+.+......+..+++..++.++.||+.||+|||++||+||||||    ++.  
T Consensus        88 Iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~  167 (351)
T 3c0i_A           88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE  167 (351)
T ss_dssp             BCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSS
T ss_pred             CCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCC
Confidence            567777665    4999999999999844444333233589999999999999999999999999999999    433  


Q ss_pred             -CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          71 -CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        71 -~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                       .+.+||+|||++.............+||+.|+|||++.   +..|+.++|||||||++|+|++|..||.+. .......
T Consensus       168 ~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~  243 (351)
T 3c0i_A          168 NSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVK---REPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEG  243 (351)
T ss_dssp             TTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHT---TCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHH
T ss_pred             CCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHc---CCCCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHH
Confidence             34599999999987765433445668999999999995   566899999999999999999999999875 3444555


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+. ..+..++..+.+||.+||..||.+|||+.++++
T Consensus       244 i~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          244 IIKGKYKMNP-RQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             HHHTCCCCCH-HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHcCCCCCCc-cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            5554433221 123467999999999999999999999999999

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=2.1e-37  Score=268.24  Aligned_cols=187  Identities=19%  Similarity=0.206  Sum_probs=148.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++ +|.+.+....+   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        63 iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~  138 (292)
T 3o0g_A           63 IVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNG---DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG  138 (292)
T ss_dssp             BCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             EeeEEeEEEeCCEEEEEEecCCC-CHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            467777665    5899999987 55535555455   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCC-CCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPM-FDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf-~~~~~~~~~~~i~  151 (302)
                      .+||+|||+++.............||+.|+|||++.  ....++.++||||+||++|+|++|..|| .+.+.......+.
T Consensus       139 ~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~  216 (292)
T 3o0g_A          139 ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLF--GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF  216 (292)
T ss_dssp             CEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHT--TCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHH
T ss_pred             CEEEeecccceecCCccccccCCccccCCcChHHHc--CCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHH
Confidence            999999999987765544555668899999999986  2334799999999999999999888775 4555555555554


Q ss_pred             hcCCCCCC------------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPA------------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....+..                        ......++..+++||.+||+.||++|||++++++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          217 RLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            32111110                        0112357899999999999999999999999999

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=7.8e-38  Score=282.70  Aligned_cols=186  Identities=19%  Similarity=0.283  Sum_probs=143.6

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~   68 (302)
                      ||++++.|.        +|||||||+||+|. +++.... ...+++..++.++.||+.||.|||++||+||||||    +
T Consensus       117 iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~-~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill  194 (400)
T 1nxk_A          117 IVRIVDVYENLYAGRKCLLIVMECLDGGELF-SRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY  194 (400)
T ss_dssp             BCCEEEEEEEEETTEEEEEEEEECCCSEEHH-HHHHCC----CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             cceEeEEEeecccCCcEEEEEEEeCCCCcHH-HHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEE
Confidence            466666553        58999999999999 7776543 22599999999999999999999999999999999    4


Q ss_pred             CC---CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          69 DR---CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        69 ~~---~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                      +.   ++.+||+|||+++..... ......+||+.|+|||++.   +..|+.++|||||||++|+|++|..||.+.....
T Consensus       195 ~~~~~~~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  270 (400)
T 1nxk_A          195 TSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLG---PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA  270 (400)
T ss_dssp             SSSSTTCCEEECCCTTCEECC------------CTTCCGGGSC---CCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCS
T ss_pred             ecCCCCccEEEEecccccccCCC-CccccCCCCCCccCHhhcC---CCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccc
Confidence            44   789999999999876543 2334668999999999995   6779999999999999999999999997654321


Q ss_pred             ----HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ----ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ----~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                          ....+.......+. ..+..++.++.+||.+||..||.+|||+.++++
T Consensus       271 ~~~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          271 ISPGMKTRIRMGQYEFPN-PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             SCCSHHHHHHHTCCCCCT-TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ccHHHHHHHHcCcccCCC-cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                23344444433332 223568999999999999999999999999999

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=1.4e-37  Score=273.91  Aligned_cols=186  Identities=15%  Similarity=0.136  Sum_probs=144.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C----
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K----   68 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~----   68 (302)
                      ||++++.+.    .|+||||++| +|. +++....   .+++..++.++.||+.||.|||++||+||||||    +    
T Consensus        95 iv~~~~~~~~~~~~~lv~e~~~~-~L~-~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~  169 (329)
T 3gbz_A           95 IIELKSVIHHNHRLHLIFEYAEN-DLK-KYMDKNP---DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSD  169 (329)
T ss_dssp             BCCEEEEEEETTEEEEEEECCSE-EHH-HHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC--
T ss_pred             cceEEEEEecCCEEEEEEecCCC-CHH-HHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCC
Confidence            466666655    5899999986 999 7777766   799999999999999999999999999999999    4    


Q ss_pred             -CCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy3574          69 -DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRAL  147 (302)
Q Consensus        69 -~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  147 (302)
                       +..+.+||+|||++.............+||+.|+|||++.  ....++.++|||||||++|+|++|..||.+.......
T Consensus       170 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  247 (329)
T 3gbz_A          170 ASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILL--GSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQL  247 (329)
T ss_dssp             ---CCEEEECCTTHHHHHC-----------CCTTCCHHHHT--TCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             CCccceEEECcCCCccccCCcccccCCCcCCccccCHHHhc--CCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHH
Confidence             5566799999999987765444445567899999999986  2345899999999999999999999999998888777


Q ss_pred             HHHHhcCCCCCCCCC-------------------------CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         148 FLMSKSGFKPPALKD-------------------------KDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~~~~~~~-------------------------~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+......++....                         ...++.++.+||.+||..||.+|||+.++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          248 FKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             HHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            776553222211100                         0116789999999999999999999999999

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=2.9e-37  Score=274.22  Aligned_cols=184  Identities=22%  Similarity=0.216  Sum_probs=142.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C---C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K---D   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~---~   69 (302)
                      ||++++.+.    .|+||||++||+|. +++...+   .+++.+++.++.||+.||.|||++||+||||||    +   +
T Consensus       110 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~  185 (349)
T 2w4o_A          110 IIKLKEIFETPTEISLVLELVTGGELF-DRIVEKG---YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPA  185 (349)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSS
T ss_pred             CcceeeeEecCCeEEEEEEeCCCCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCC
Confidence            567777665    48999999999999 7777666   799999999999999999999999999999999    4   3


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR-ALF  148 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~  148 (302)
                      .++.+||+|||+++..... ......+||+.|+|||++.   +..++.++|||||||++|+|++|..||.+..... ...
T Consensus       186 ~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  261 (349)
T 2w4o_A          186 PDAPLKIADFGLSKIVEHQ-VLMKTVCGTPGYCAPEILR---GCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFR  261 (349)
T ss_dssp             TTCCEEECCCC-----------------CGGGSCHHHHT---TCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHH
T ss_pred             CCCCEEEccCccccccCcc-cccccccCCCCccCHHHhc---CCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHH
Confidence            4899999999999876543 2334567999999999995   6678999999999999999999999998766554 444


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+.......+ ......++..+.+||.+||..||++|||+.++++
T Consensus       262 ~i~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          262 RILNCEYYFI-SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             HHHTTCCCCC-TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHhCCCccC-CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            4444433222 2234568999999999999999999999999999

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=6.6e-38  Score=272.13  Aligned_cols=185  Identities=20%  Similarity=0.251  Sum_probs=152.8

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      ||++++.+.      .|+||||+++|+|. ++... .   .+++..++.++.||+.||+|||++||+||||||    ++.
T Consensus        98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~-~~~~~-~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~  172 (298)
T 2zv2_A           98 VVKLVEVLDDPNEDHLYMVFELVNQGPVM-EVPTL-K---PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGE  172 (298)
T ss_dssp             BCCEEEEEECSSSSEEEEEEECCTTCBSC-CSSCS-S---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred             CCeEEEEEEcCCCCEEEEEEecCCCCcHH-HHhhc-C---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC
Confidence            466777654      58999999999998 55432 2   699999999999999999999999999999999    788


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      ++.+||+|||++..............||+.|+|||++.+.....++.++|||||||++|+|++|..||.+.........+
T Consensus       173 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~  252 (298)
T 2zv2_A          173 DGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKI  252 (298)
T ss_dssp             TSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHH
Confidence            89999999999987765433445568999999999986221112478899999999999999999999988877766666


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .......+.   ...++..+.+||.+||..||.+|||+.++++
T Consensus       253 ~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          253 KSQALEFPD---QPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HHCCCCCCS---SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             hcccCCCCC---ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            665433332   3567999999999999999999999999999

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-37  Score=278.99  Aligned_cols=185  Identities=20%  Similarity=0.266  Sum_probs=155.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC--C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD--R   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~--~   70 (302)
                      ||++++.+.    .|+||||+.||+|. +++....  ..+++..+..++.||+.||+|||++||+||||||    ++  .
T Consensus       110 Iv~~~~~~~~~~~~~lv~E~~~gg~L~-~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~  186 (387)
T 1kob_A          110 LINLHDAFEDKYEMVLILEFLSGGELF-DRIAAED--YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKK  186 (387)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCCCBHH-HHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTT
T ss_pred             CCeEEEEEEeCCEEEEEEEcCCCCcHH-HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCC
Confidence            567777765    58999999999999 6665432  2699999999999999999999999999999999    43  5


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      .+.+||+|||++...... ......+||+.|+|||++.   +..++.++|||||||++|+|++|..||.+.+.......+
T Consensus       187 ~~~vkL~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i  262 (387)
T 1kob_A          187 ASSVKIIDFGLATKLNPD-EIVKVTTATAEFAAPEIVD---REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV  262 (387)
T ss_dssp             CCCEEECCCTTCEECCTT-SCEEEECSSGGGCCHHHHT---TCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH
T ss_pred             CCceEEEecccceecCCC-cceeeeccCCCccCchhcc---CCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            678999999999876543 2233457999999999995   667899999999999999999999999998888888777


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .......+. .....++.++.+||.+||..||.+|||+.++++
T Consensus       263 ~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          263 KRCDWEFDE-DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             HHCCCCCCS-STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HhCCCCCCc-cccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence            766544332 223568999999999999999999999999999

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=2.7e-37  Score=270.81  Aligned_cols=189  Identities=20%  Similarity=0.262  Sum_probs=152.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc---cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT---AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~   69 (302)
                      ||++++.+.    .|+||||++| +|. +++.....   ...+++..++.++.||+.||.|||++||+||||||    ++
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~~-~L~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~  142 (317)
T 2pmi_A           65 IVRLYDVIHTENKLTLVFEFMDN-DLK-KYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN  142 (317)
T ss_dssp             BCCEEEEECCTTEEEEEEECCCC-BHH-HHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred             cceEEEEEEECCeEEEEEEecCC-CHH-HHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEc
Confidence            577777765    5899999985 898 66654321   12588999999999999999999999999999999    88


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      .+|.+||+|||+++............+||+.|+|||++.  ....++.++|||||||++|+|++|+.||.+.+.......
T Consensus       143 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  220 (317)
T 2pmi_A          143 KRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLM--GSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKL  220 (317)
T ss_dssp             TTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHT--TCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             CCCCEEECcCccceecCCCcccCCCCcccccccCchHhh--CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence            899999999999987654434445567899999999986  234589999999999999999999999999888777766


Q ss_pred             HHhcCCCCCC-----------------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPA-----------------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~-----------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +......++.                             ......++.++.+||.+||+.||.+|||+.++++
T Consensus       221 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          221 IFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             HHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence            6542111110                             0012357889999999999999999999999999

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=7.3e-38  Score=281.85  Aligned_cols=185  Identities=17%  Similarity=0.227  Sum_probs=149.1

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      ||++++.+.      +|+|||||++ +|. .++..+    .+++..++.++.||+.||+|||++||+||||||    ++.
T Consensus        71 iv~l~~~~~~~~~~~~~lv~e~~~~-~L~-~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~  144 (388)
T 3oz6_A           71 IVNLLNVLRADNDRDVYLVFDYMET-DLH-AVIRAN----ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNA  144 (388)
T ss_dssp             BCCEEEEEECTTSSCEEEEEECCSE-EHH-HHHHHT----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred             CCeeeeEEecCCCCEEEEEecccCc-CHH-HHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcC
Confidence            567777663      5999999985 898 777654    599999999999999999999999999999999    888


Q ss_pred             CCCEEEeccccccccccc---------------------cccccccccCcccchhhcccccccCCCCchhhHHHHHHHHH
Q psy3574          71 CGDVKLADFGVSAQITAT---------------------INKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAI  129 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~---------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~  129 (302)
                      ++.+||+|||+|+.....                     .......+||+.|+|||++.  ....|+.++|||||||++|
T Consensus       145 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~~DiwSlG~il~  222 (388)
T 3oz6_A          145 ECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILL--GSTKYTKGIDMWSLGCILG  222 (388)
T ss_dssp             TCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHT--TCCCCCTHHHHHHHHHHHH
T ss_pred             CCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhc--CCCCCCChhhHHHHHHHHH
Confidence            999999999999865321                     11234468999999999986  2356899999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHhcCCCCCCC------------------------------------------CCCCCCC
Q psy3574         130 ELAELQPPMFDLHPMRALFLMSKSGFKPPAL------------------------------------------KDKDRWS  167 (302)
Q Consensus       130 ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~------------------------------------------~~~~~~s  167 (302)
                      +|++|++||.+.+....+..+......+...                                          .....++
T Consensus       223 ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (388)
T 3oz6_A          223 EILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCN  302 (388)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCC
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCC
Confidence            9999999999988888777765422111100                                          0112568


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         168 STFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       168 ~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +++.+||.+||..||.+|||++++|+
T Consensus       303 ~~~~dll~~~L~~dP~~R~t~~e~l~  328 (388)
T 3oz6_A          303 EEALDLLDKLLQFNPNKRISANDALK  328 (388)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHhhccCcccCCCHHHHhC
Confidence            89999999999999999999999999

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=2e-37  Score=285.24  Aligned_cols=180  Identities=20%  Similarity=0.237  Sum_probs=156.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.+.    .|+||||++||+|. +++...+   .+++..++.++.||+.||.|||++||+||||||    ++.++
T Consensus        78 Iv~l~~~~~~~~~~~lv~E~~~gg~L~-~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~  153 (476)
T 2y94_A           78 IIKLYQVISTPSDIFMVMEYVSGGELF-DYICKNG---RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHM  153 (476)
T ss_dssp             BCCEEEEEECSSEEEEEEECCSSEEHH-HHTTSSS---SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTC
T ss_pred             CCcEEEEEEECCEEEEEEeCCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCC
Confidence            567777665    58999999999999 7877666   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      .+||+|||++...... ......+||+.|+|||++.   +..+ +.++|||||||++|+|++|..||.+.+.......+.
T Consensus       154 ~vkL~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~  229 (476)
T 2y94_A          154 NAKIADFGLSNMMSDG-EFLRTSCGSPNYAAPEVIS---GRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKIC  229 (476)
T ss_dssp             CEEECCCSSCEECCTT-CCBCCCCSCSTTCCHHHHT---TCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHH
T ss_pred             CeEEEeccchhhcccc-ccccccCCCcCeEChhhcc---CCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHh
Confidence            9999999999876543 3344668999999999996   4433 689999999999999999999999888877777776


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ......     +..+++.+.+||.+||..||.+|||+.++++
T Consensus       230 ~~~~~~-----p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          230 DGIFYT-----PQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             TTCCCC-----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cCCcCC-----CccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence            654332     3567899999999999999999999999999

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1.2e-36  Score=262.73  Aligned_cols=186  Identities=22%  Similarity=0.264  Sum_probs=146.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C---C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K---D   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~---~   69 (302)
                      ||++++.+.    .|+||||++||+|.+.+......+..+++..++.++.||+.||+|||++||+||||||    +   +
T Consensus        82 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~  161 (285)
T 3is5_A           82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS  161 (285)
T ss_dssp             BCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSS
T ss_pred             HHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCC
Confidence            467777665    4899999999999944433322223799999999999999999999999999999999    3   5


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      ..+.+||+|||++...... .......|++.|+|||++    ...++.++|||||||++|+|++|..||.+.........
T Consensus       162 ~~~~~kl~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~----~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~  236 (285)
T 3is5_A          162 PHSPIKIIDFGLAELFKSD-EHSTNAAGTALYMAPEVF----KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQK  236 (285)
T ss_dssp             TTCCEEECCCCCCCC-----------CTTGGGCCHHHH----TTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCCEEEEeeecceecCCc-ccCcCcccccCcCChHHh----ccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhh
Confidence            5688999999999766543 233456799999999998    34588999999999999999999999998887777666


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.........  ....+++.+.+||.+||..||.+|||+.++++
T Consensus       237 ~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          237 ATYKEPNYAV--ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHCCCCCCC----CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             hccCCccccc--ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            6554433222  23447899999999999999999999999999

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=7.7e-38  Score=275.26  Aligned_cols=185  Identities=19%  Similarity=0.233  Sum_probs=132.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC-
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC-   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~-   71 (302)
                      ||++++.+.    .|+||||++||+|. +++....   .+++.+++.++.||+.||+|||++||+||||||    ++.. 
T Consensus        68 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~  143 (325)
T 3kn6_A           68 IVKLHEVFHDQLHTFLVMELLNGGELF-ERIKKKK---HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN  143 (325)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC--
T ss_pred             eeEEEEEEEcCCEEEEEEEccCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCC
Confidence            567777665    58999999999999 7777766   799999999999999999999999999999999    4333 


Q ss_pred             --CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh------
Q psy3574          72 --GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHP------  143 (302)
Q Consensus        72 --~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------  143 (302)
                        ..+||+|||+++............+||+.|+|||++.   +..|+.++|||||||++|+|++|..||.+...      
T Consensus       144 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  220 (325)
T 3kn6_A          144 DNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLN---QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTS  220 (325)
T ss_dssp             --CEEEECCCTTCEECCC-------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCC
T ss_pred             CcccEEEeccccceecCCCCCcccccCCCcCccCHHHhc---CCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccccc
Confidence              3899999999987665444455667899999999995   66789999999999999999999999976432      


Q ss_pred             -HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         144 -MRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       144 -~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                       .+....+.......+ ...+..++.++.+||.+||..||.+|||+.++++
T Consensus       221 ~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          221 AVEIMKKIKKGDFSFE-GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             HHHHHHHHTTTCCCCC-SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             HHHHHHHHHcCCCCCC-cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence             344444444433222 1122457999999999999999999999999999

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=4e-38  Score=278.10  Aligned_cols=179  Identities=21%  Similarity=0.245  Sum_probs=146.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+ +|+|. +++...+   .+++.+++.++.||+.||.|||++||+||||||    ++.++
T Consensus        71 Iv~l~~~~~~~~~~~lv~E~~-~g~l~-~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~  145 (336)
T 3h4j_B           71 IIKLYDVITTPTDIVMVIEYA-GGELF-DYIVEKK---RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNL  145 (336)
T ss_dssp             BCCEEEEEECSSEEEEEECCC-CEEHH-HHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTC
T ss_pred             CCeEEEEEEeCCEEEEEEECC-CCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCC
Confidence            567777665    48999999 67998 6666555   799999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      .+||+|||++...... ......+||+.|+|||++.   +..+ +.++|||||||++|+|++|..||.+.........+.
T Consensus       146 ~~kl~DFG~s~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~  221 (336)
T 3h4j_B          146 NVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVIN---GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVN  221 (336)
T ss_dssp             CEEECCSSCTBTTTTS-BTTCCCTTSTTTSCGGGSC---CSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCC
T ss_pred             CEEEEEeccceeccCC-cccccccCCcCcCCHHHHc---CCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence            9999999999876554 3345568999999999996   4444 689999999999999999999997654333221111


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                           ......+..+++.+.+||.+||..||.+|||+.++++
T Consensus       222 -----~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          222 -----SCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             -----SSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             -----cCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence                 1122334668999999999999999999999999999

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.9e-37  Score=272.63  Aligned_cols=187  Identities=17%  Similarity=0.201  Sum_probs=145.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++| +|. +++...+  ..+++..++.++.||+.||.|||++||+||||||    ++.++
T Consensus        62 iv~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~  137 (324)
T 3mtl_A           62 IVTLHDIIHTEKSLTLVFEYLDK-DLK-QYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERG  137 (324)
T ss_dssp             BCCEEEEEECSSCEEEEEECCSE-EHH-HHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTC
T ss_pred             CCeeeeEEeeCCEEEEEeccccc-CHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCC
Confidence            466777664    5899999986 888 5555433  2699999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++.............+||+.|+|||++.  ....++.++|||||||++|+|++|..||.+.+..+....+..
T Consensus       138 ~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~  215 (324)
T 3mtl_A          138 ELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILL--GSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFR  215 (324)
T ss_dssp             CEEECSSSEEECC------------CGGGCCHHHHT--TCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CEEEccCcccccccCCccccccccCcccccChhhhc--CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            999999999987655444445567899999999986  235689999999999999999999999999888877776655


Q ss_pred             cCCCCCCCC-------------------------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALK-------------------------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~-------------------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....++...                         ....++..+.+||.+||+.||.+|||++++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          216 ILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             HHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            322221111                         12346889999999999999999999999999

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=6.9e-37  Score=283.81  Aligned_cols=183  Identities=21%  Similarity=0.351  Sum_probs=156.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC---
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD---   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~---   69 (302)
                      ||++++.+.    +|+|||||.||+|. +.+....   .+++..++.++.||+.||.|||++||+||||||    ++   
T Consensus        98 iv~~~~~~~~~~~~~lv~e~~~~g~L~-~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~  173 (494)
T 3lij_A           98 IMKLYDFFEDKRNYYLVMECYKGGELF-DEIIHRM---KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKE  173 (494)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS
T ss_pred             CCeEEEEEEeCCEEEEEEecCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCC
Confidence            577777766    58999999999999 6666655   799999999999999999999999999999999    33   


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      ..+.+||+|||++...... ......+||+.|+|||++.    ..|+.++||||+||++|+|++|.+||.+.........
T Consensus       174 ~~~~~kl~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  248 (494)
T 3lij_A          174 KDALIKIVDFGLSAVFENQ-KKMKERLGTAYYIAPEVLR----KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRK  248 (494)
T ss_dssp             TTCCEEECCCTTCEECBTT-BCBCCCCSCTTTCCHHHHT----TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCcEEEEECCCCeECCCC-ccccccCCCcCeeCHHHHc----ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            3567999999999876654 3344568999999999983    4589999999999999999999999999998888888


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+. ..+..++..+.+||.+||..||.+|||+.++|+
T Consensus       249 i~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          249 VEKGKYTFDS-PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             HHHTCCCCCS-GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHhCCCCCCc-hhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence            8776654432 234568999999999999999999999999999

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=6.2e-37  Score=273.24  Aligned_cols=182  Identities=20%  Similarity=0.266  Sum_probs=136.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    +|+||||++||+|. .++...+   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        78 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~  153 (361)
T 3uc3_A           78 IVRFKEVILTPTHLAIIMEYASGGELY-ERICNAG---RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSP  153 (361)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSS
T ss_pred             CCcEEEEEeeCCEEEEEEEeCCCCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC
Confidence            567777665    58999999999999 7777666   799999999999999999999999999999999    54444


Q ss_pred             --CEEEeccccccccccccccccccccCcccchhhcccccccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCh----HH
Q psy3574          73 --DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYN-QQCDIWAVGITAIELAELQPPMFDLHP----MR  145 (302)
Q Consensus        73 --~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~-~~~DiwslG~il~ell~g~~pf~~~~~----~~  145 (302)
                        .+||+|||+++..... ......+||+.|+|||++.   +..+. .++|||||||++|+|++|+.||.+...    ..
T Consensus       154 ~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~  229 (361)
T 3uc3_A          154 APRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLL---RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRK  229 (361)
T ss_dssp             SCCEEECCCCCC----------------CTTSCHHHHH---CSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHH
T ss_pred             CceEEEeecCcccccccc-CCCCCCcCCCCcCChhhhc---CCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHH
Confidence              5999999998754332 2334567999999999986   44454 448999999999999999999976433    33


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+.......+   ....+++.+.+||.+||..||.+|||+.++++
T Consensus       230 ~~~~~~~~~~~~~---~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          230 TIQRILSVKYSIP---DDIRISPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             HHHHHHTTCCCCC---TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHHhcCCCCCC---CcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence            3344444333322   23457999999999999999999999999999

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=2.3e-37  Score=284.65  Aligned_cols=182  Identities=21%  Similarity=0.250  Sum_probs=141.3

Q ss_pred             Cchhhhcch----------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---
Q psy3574           1 MSRVFNHFL----------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---   67 (302)
Q Consensus         1 iv~~~~~~~----------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---   67 (302)
                      ||++++.|.          .|+||||+++ +|. ..+.  .   .+++..++.+++||+.||+|||++||+||||||   
T Consensus       123 Iv~l~~~~~~~~~~~~~~~~~lv~E~~~~-~l~-~~~~--~---~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NI  195 (464)
T 3ttj_A          123 IISLLNVFTPQKTLEEFQDVYLVMELMDA-NLC-QVIQ--M---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI  195 (464)
T ss_dssp             BCCCSEEECSCCSTTTCCEEEEEEECCSE-EHH-HHHT--S---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGE
T ss_pred             CCcEEEEEccCCccccCCeEEEEEeCCCC-CHH-HHHh--h---cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhE
Confidence            567777663          4899999987 455 4443  2   488999999999999999999999999999999   


Q ss_pred             -CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH
Q psy3574          68 -KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRA  146 (302)
Q Consensus        68 -~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  146 (302)
                       ++.++.+||+|||+++..... ......+||+.|+|||++.   +..|+.++|||||||++|+|++|++||.+.+..+.
T Consensus       196 ll~~~~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~  271 (464)
T 3ttj_A          196 VVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVIL---GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ  271 (464)
T ss_dssp             EECTTSCEEECCCCCC-----C-CCC----CCCTTCCHHHHT---TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             EEeCCCCEEEEEEEeeeecCCC-cccCCCcccccccCHHHHc---CCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence             888999999999999876543 3345578999999999996   66799999999999999999999999999888877


Q ss_pred             HHHHHhcCCCCCC----------------------CCC----CCC-----------CCHHHHHHHHHhhhcCCCCCCCHH
Q psy3574         147 LFLMSKSGFKPPA----------------------LKD----KDR-----------WSSTFHNFVKIALTKNPKKRPTAD  189 (302)
Q Consensus       147 ~~~i~~~~~~~~~----------------------~~~----~~~-----------~s~~~~~li~~~L~~dp~~R~t~~  189 (302)
                      +..+......+..                      ...    +..           .+.++++||.+||..||.+|||++
T Consensus       272 ~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~  351 (464)
T 3ttj_A          272 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD  351 (464)
T ss_dssp             HHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             HHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHH
Confidence            7766553221110                      000    000           156799999999999999999999


Q ss_pred             HHHH
Q psy3574         190 KLLQ  193 (302)
Q Consensus       190 ~ll~  193 (302)
                      ++|+
T Consensus       352 e~L~  355 (464)
T 3ttj_A          352 DALQ  355 (464)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            9999

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=5.9e-37  Score=281.74  Aligned_cols=186  Identities=19%  Similarity=0.234  Sum_probs=139.7

Q ss_pred             Cchhhhcc---------hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----
Q psy3574           1 MSRVFNHF---------LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----   67 (302)
Q Consensus         1 iv~~~~~~---------~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----   67 (302)
                      ||++++.+         .+|+||||+. |+|. .++....   .+++..++.+++||+.||+|||++||+||||||    
T Consensus       114 iv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~-~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NIL  188 (458)
T 3rp9_A          114 VVKVLDIVIPKDVEKFDELYVVLEIAD-SDFK-KLFRTPV---YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCL  188 (458)
T ss_dssp             BCCEEEECCCSCTTTCCCEEEEECCCS-EEHH-HHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEE
T ss_pred             CCceEEEEecCCcccCceEEEEEeccc-cchh-hhcccCC---CCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEE
Confidence            56777765         2599999985 5998 7887766   799999999999999999999999999999999    


Q ss_pred             CCCCCCEEEecccccccccccc---------------------------ccccccccCcccchhhcccccccCCCCchhh
Q psy3574          68 KDRCGDVKLADFGVSAQITATI---------------------------NKRKSFIGTPYWMAPEVAAVERKGGYNQQCD  120 (302)
Q Consensus        68 ~~~~~~ikL~DFg~a~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~D  120 (302)
                      ++.++.+||+|||+++......                           ......+||+.|+|||++.  ....|+.++|
T Consensus       189 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~~~~D  266 (458)
T 3rp9_A          189 VNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL--LQENYTEAID  266 (458)
T ss_dssp             ECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHT--TCCCCCTHHH
T ss_pred             ECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhh--CCCCCCcHhH
Confidence            8889999999999998764321                           1234467899999999874  3566999999


Q ss_pred             HHHHHHHHHHHHh-----------CCCCCCCCCh--------------------HHHHHHHHhcCCCC------------
Q psy3574         121 IWAVGITAIELAE-----------LQPPMFDLHP--------------------MRALFLMSKSGFKP------------  157 (302)
Q Consensus       121 iwslG~il~ell~-----------g~~pf~~~~~--------------------~~~~~~i~~~~~~~------------  157 (302)
                      ||||||++|||++           |+++|.+...                    ...+..+......+            
T Consensus       267 iwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~  346 (458)
T 3rp9_A          267 VWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKED  346 (458)
T ss_dssp             HHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHH
T ss_pred             HHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHH
Confidence            9999999999998           6777755431                    12222222110000            


Q ss_pred             --------------CCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         158 --------------PALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       158 --------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                    ........++.++.+||.+||..||.+|||++++|+
T Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~  396 (458)
T 3rp9_A          347 AKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLA  396 (458)
T ss_dssp             HHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence                          001112456899999999999999999999999999

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=1.2e-36  Score=281.76  Aligned_cols=183  Identities=24%  Similarity=0.350  Sum_probs=154.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C---C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K---D   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~---~   69 (302)
                      ||++++.+.    +|+|||||.||+|. +.+....   .+++..++.++.||+.||.|||++||+||||||    +   +
T Consensus        83 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~  158 (486)
T 3mwu_A           83 IMKLFEILEDSSSFYIVGELYTGGELF-DEIIKRK---RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE  158 (486)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSS
T ss_pred             cCeEEEEEEcCCEEEEEEEcCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC
Confidence            567777665    58999999999999 6666555   799999999999999999999999999999999    3   4


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      .++.+||+|||++...... ......+||+.|+|||++.    ..|+.++||||+||++|+|++|.+||.+.+..+....
T Consensus       159 ~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  233 (486)
T 3mwu_A          159 KDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVLR----GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR  233 (486)
T ss_dssp             TTCCEEECSCSCTTTBCCC-----CCTTGGGGCCGGGGG----SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCCEEEEECCcCeECCCC-CccCCCcCCCCCCCHHHhC----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            5678999999999876543 3334567999999999984    3589999999999999999999999999998888888


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+ ...+..++..+++||.+||..||.+|||+.++|+
T Consensus       234 i~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          234 VETGKYAFD-LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             HHHTCCCSC-SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHhCCCCCC-CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            877654433 2334568999999999999999999999999999

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=1.1e-36  Score=267.28  Aligned_cols=184  Identities=20%  Similarity=0.266  Sum_probs=155.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. +++....   .+++..++.++.||+.||.|||++||+||||||    ++.++
T Consensus        77 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~  152 (321)
T 2a2a_A           77 VITLHDVYENRTDVVLILELVSGGELF-DFLAQKE---SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN  152 (321)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHHTCS---CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTT
T ss_pred             cceEEEEEecCCEEEEEEEcCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCC
Confidence            466666655    58999999999999 8887766   799999999999999999999999999999999    55555


Q ss_pred             ----CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q psy3574          73 ----DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF  148 (302)
Q Consensus        73 ----~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  148 (302)
                          .+||+|||++...... .......||+.|+|||++.   +..++.++|||||||++|+|++|..||.+........
T Consensus       153 ~~~~~~kl~Dfg~~~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  228 (321)
T 2a2a_A          153 IPIPHIKLIDFGLAHEIEDG-VEFKNIFGTPEFVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA  228 (321)
T ss_dssp             SSSCCEEECCCTTCEECCTT-CCCCCCCSCGGGCCHHHHT---TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH
T ss_pred             CCcCCEEEccCccceecCcc-ccccccCCCCCccCccccc---CCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence                7999999999876653 2334557999999999985   6678999999999999999999999999988888777


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+.......+. .....++..+.+||.+||..||.+|||+.++++
T Consensus       229 ~i~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          229 NITSVSYDFDE-EFFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             HHHTTCCCCCH-HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             HHHhcccccCh-hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            77665433221 122457899999999999999999999999999

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-36  Score=268.85  Aligned_cols=187  Identities=19%  Similarity=0.182  Sum_probs=153.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++ +|. .++....  ..+++..++.++.|++.||+|||++||+||||||    ++.+|
T Consensus        74 iv~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~  149 (346)
T 1ua2_A           74 IIGLLDAFGHKSNISLVFDFMET-DLE-VIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG  149 (346)
T ss_dssp             BCCEEEEECCTTCCEEEEECCSE-EHH-HHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             CCeEEEEEeeCCceEEEEEcCCC-CHH-HHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCC
Confidence            567777664    5899999987 888 5555432  2699999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+++............+||+.|+|||++.  ....++.++|||||||++|+|++|.+||.+......+..+..
T Consensus       150 ~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~  227 (346)
T 1ua2_A          150 VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLF--GARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFE  227 (346)
T ss_dssp             CEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHT--TCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CEEEEecccceeccCCcccCCcccccccccCchHhh--CCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            999999999987765444455668999999999985  234588999999999999999999999999888877777655


Q ss_pred             cCCCCCCCC-----------------------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALK-----------------------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~-----------------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+....                       ....++..+.+||.+||..||.+|||+.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          228 TLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  291 (346)
T ss_dssp             HHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence            322211100                       01446789999999999999999999999999

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=3.6e-37  Score=271.16  Aligned_cols=186  Identities=22%  Similarity=0.333  Sum_probs=150.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC--
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR--   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~--   70 (302)
                      ||++++.+.    .|+||||+.||+|. +++.... ...+++..++.++.||+.||+|||++||+||||||    ++.  
T Consensus        91 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~  168 (327)
T 3lm5_A           91 VINLHEVYENTSEIILILEYAAGGEIF-SLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIY  168 (327)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTEEGG-GGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBT
T ss_pred             EEEEEEEEEeCCeEEEEEEecCCCcHH-HHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCC
Confidence            456666655    58999999999999 6664331 12699999999999999999999999999999999    444  


Q ss_pred             -CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          71 -CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        71 -~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                       .+.+||+|||++...... .......||+.|+|||++.   ...++.++|||||||++|+|++|..||.+.........
T Consensus       169 ~~~~~kL~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  244 (327)
T 3lm5_A          169 PLGDIKIVDFGMSRKIGHA-CELREIMGTPEYLAPEILN---YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN  244 (327)
T ss_dssp             TBCCEEECCGGGCEEC----------CCCGGGCCHHHHT---TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCcEEEeeCccccccCCc-cccccccCCcCccCCeeec---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHH
Confidence             789999999999876543 2234567999999999995   66789999999999999999999999999888887777


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+. .....++..+.+||.+||..||.+|||++++++
T Consensus       245 i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          245 ISQVNVDYSE-ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             HHHTCCCCCT-TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHhcccccCc-hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence            7665544332 233568999999999999999999999999999

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.1e-36  Score=267.40  Aligned_cols=183  Identities=22%  Similarity=0.255  Sum_probs=146.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++|+|. +++....   .+++..++.++.||+.||.|||++||+||||||    ++.++
T Consensus       121 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  196 (355)
T 1vzo_A          121 LVTLHYAFQTETKLHLILDYINGGELF-THLSQRE---RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG  196 (355)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCSCBHH-HHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             eeEEEEEEeeCceEEEEeecCCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            456666554    58999999999999 7777666   799999999999999999999999999999999    88899


Q ss_pred             CEEEecccccccccccc-ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----hHHHH
Q psy3574          73 DVKLADFGVSAQITATI-NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH----PMRAL  147 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~~  147 (302)
                      .+||+|||+++...... ......+||+.|+|||++.+. ...++.++|||||||++|+|++|..||....    .....
T Consensus       197 ~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~  275 (355)
T 1vzo_A          197 HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGG-DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS  275 (355)
T ss_dssp             CEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTC-C---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHH
T ss_pred             cEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCC-CCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHH
Confidence            99999999998664332 223456799999999998521 2347899999999999999999999996432    23333


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHH
Q psy3574         148 FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~  193 (302)
                      ..+......     .+..++..+.+||.+||..||.+||     +++++++
T Consensus       276 ~~~~~~~~~-----~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~  321 (355)
T 1vzo_A          276 RRILKSEPP-----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  321 (355)
T ss_dssp             HHHHHCCCC-----CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             HHHhccCCC-----CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence            333333221     2356789999999999999999999     9999999

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=6e-37  Score=267.47  Aligned_cols=187  Identities=19%  Similarity=0.232  Sum_probs=146.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++++|. .++....   .+++..++.++.|++.||+|||++||+||||||    ++.++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~l~-~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~  139 (311)
T 4agu_A           64 LVNLLEVFRRKRRLHLVFEYCDHTVLH-ELDRYQR---GVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHS  139 (311)
T ss_dssp             BCCEEEEEEETTEEEEEEECCSEEHHH-HHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             ccchhheeecCCeEEEEEEeCCCchHH-HHHhhhc---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCC
Confidence            466676655    48999999999998 7777666   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++.............+||+.|+|||++.  ....++.++||||+||++|+|++|..||.+.........+..
T Consensus       140 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  217 (311)
T 4agu_A          140 VIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLV--GDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRK  217 (311)
T ss_dssp             CEEECCCTTCEECC------------GGGCCHHHHH--TCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CEEEeeCCCchhccCcccccCCCcCCccccChHHHh--cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            999999999987765444445667999999999985  235689999999999999999999999998887766655443


Q ss_pred             cCC-------------------CCCCCC-------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGF-------------------KPPALK-------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~-------------------~~~~~~-------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...                   ..+...       ....++..+.+||.+||..||.+|||++++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          218 TLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             HHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             HhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            110                   001000       01357889999999999999999999999999

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=2.9e-37  Score=271.32  Aligned_cols=184  Identities=18%  Similarity=0.214  Sum_probs=148.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.+.    .|+||||++||+|. +++....   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        67 Iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~  142 (323)
T 3tki_A           67 VVKFYGHRREGNIQYLFLEYCSGGELF-DRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD  142 (323)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTEEGG-GGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             CCeEEEEEecCCeEEEEEEcCCCCcHH-HHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCC
Confidence            567777665    48999999999999 7776665   799999999999999999999999999999999    88889


Q ss_pred             CEEEecccccccccccc--ccccccccCcccchhhcccccccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          73 DVKLADFGVSAQITATI--NKRKSFIGTPYWMAPEVAAVERKGG-YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      .+||+|||+++......  ......+||+.|+|||++.   +.. ++.++|||||||++|+|++|..||...........
T Consensus       143 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  219 (323)
T 3tki_A          143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS  219 (323)
T ss_dssp             CEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHH---CSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHH
T ss_pred             CEEEEEeeccceeccCCcccccCCCccCcCccCcHHhc---cCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHH
Confidence            99999999998654321  2234568999999999985   333 47789999999999999999999977654322222


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .......  .......++..+.+||.+||..||.+|||+.++++
T Consensus       220 ~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          220 DWKEKKT--YLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             HHHTTCT--TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHhcccc--cCCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            2222111  11123567999999999999999999999999999

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=5.5e-37  Score=276.18  Aligned_cols=190  Identities=24%  Similarity=0.327  Sum_probs=146.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    .|+|||||++|+|. +++.... ...+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        88 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~  165 (389)
T 3gni_B           88 IVPYRATFIADNELWVVTSFMAYGSAK-DLICTHF-MDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG  165 (389)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTCBHH-HHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             CCcEeEEEEECCEEEEEEEccCCCCHH-HHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            577777766    58999999999999 7776641 12699999999999999999999999999999999    88899


Q ss_pred             CEEEecccccccccccc-------ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          73 DVKLADFGVSAQITATI-------NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                      .+||+|||.+.......       ......+||+.|+|||++.+. ...|+.++|||||||++|+|++|+.||.+.....
T Consensus       166 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  244 (389)
T 3gni_B          166 KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQN-LQGYDAKSDIYSVGITACELANGHVPFKDMPATQ  244 (389)
T ss_dssp             CEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTT-SSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT
T ss_pred             CEEEcccccceeeccccccccccccccccccccccccCHHHHhcc-CCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence            99999999886553321       112234789999999999621 1568999999999999999999999998766554


Q ss_pred             HHHHHHhcCCC-----------------------------------------CCCCCCCCCCCHHHHHHHHHhhhcCCCC
Q psy3574         146 ALFLMSKSGFK-----------------------------------------PPALKDKDRWSSTFHNFVKIALTKNPKK  184 (302)
Q Consensus       146 ~~~~i~~~~~~-----------------------------------------~~~~~~~~~~s~~~~~li~~~L~~dp~~  184 (302)
                      ....+......                                         .+....+..+++.+.+||.+||+.||.+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  324 (389)
T 3gni_B          245 MLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDA  324 (389)
T ss_dssp             HHHHC--------------------------------------------------------CCHHHHHHHHHHTCSCTTT
T ss_pred             HHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCccc
Confidence            44333221110                                         0011123557899999999999999999


Q ss_pred             CCCHHHHHH
Q psy3574         185 RPTADKLLQ  193 (302)
Q Consensus       185 R~t~~~ll~  193 (302)
                      |||+.++|+
T Consensus       325 Rpta~ell~  333 (389)
T 3gni_B          325 RPSASTLLN  333 (389)
T ss_dssp             SCCHHHHTT
T ss_pred             CCCHHHHhc
Confidence            999999999

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1.1e-36  Score=271.97  Aligned_cols=187  Identities=21%  Similarity=0.367  Sum_probs=156.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||++||+|. +++....   .+++..+..++.||+.||.|||++||+||||||    ++.+|
T Consensus       162 iv~~~~~~~~~~~~~lv~e~~~g~~L~-~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~  237 (365)
T 2y7j_A          162 IITLIDSYESSSFMFLVFDLMRKGELF-DYLTEKV---ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNM  237 (365)
T ss_dssp             BCCEEEEEEBSSEEEEEECCCTTCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             EeEEEEEEeeCCEEEEEEEeCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            456666554    48999999999999 7777666   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhccccc---ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE---RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      .+||+|||++..+... ......+||+.|+|||++.+.   ....++.++|||||||++|+|++|..||...........
T Consensus       238 ~ikl~DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~  316 (365)
T 2y7j_A          238 QIRLSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM  316 (365)
T ss_dssp             CEEECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CEEEEecCcccccCCC-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence            9999999999876643 334456899999999998532   123578899999999999999999999998888777777


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+. ..+..++..+.+||.+||..||.+|||+.++++
T Consensus       317 i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          317 IMEGQYQFSS-PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             HHHTCCCCCH-HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHhCCCCCCC-cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            7665443321 123467899999999999999999999999999

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=4.5e-37  Score=277.28  Aligned_cols=189  Identities=22%  Similarity=0.245  Sum_probs=149.5

Q ss_pred             Cchhhhcch----------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---
Q psy3574           1 MSRVFNHFL----------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---   67 (302)
Q Consensus         1 iv~~~~~~~----------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---   67 (302)
                      ||++++.|.          +|+||||++++.+. .+.........+++..++.++.||+.||+|||++||+||||||   
T Consensus        94 iv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Ni  172 (394)
T 4e7w_A           94 VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYR-ASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNL  172 (394)
T ss_dssp             BCCEEEEEEEESSSSSCEEEEEEEECCSEEHHH-HHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred             cceEEEEEEecCCCCCceEEEEEeeccCccHHH-HHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHE
Confidence            466666662          67999999985443 4443222223799999999999999999999999999999999   


Q ss_pred             -CC-CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          68 -KD-RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        68 -~~-~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                       ++ .++.+||+|||+++..... ......+||+.|+|||++.  ....|+.++||||+||++|+|++|+.||.+.+...
T Consensus       173 ll~~~~~~~kL~DFG~a~~~~~~-~~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~  249 (394)
T 4e7w_A          173 LLDPPSGVLKLIDFGSAKILIAG-EPNVSYICSRYYRAPELIF--GATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID  249 (394)
T ss_dssp             EEETTTTEEEECCCTTCEECCTT-CCCCSSCSCGGGCCHHHHT--TCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             EEcCCCCcEEEeeCCCcccccCC-CCCcccccCcCccCHHHHc--CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence             65 7899999999999876544 3344567899999999986  23458999999999999999999999999988877


Q ss_pred             HHHHHHhcCCCC-----------------CCC-------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFKP-----------------PAL-------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~-----------------~~~-------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+..+......+                 +..       .....+++++.+||.+||..||.+|||+.++++
T Consensus       250 ~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          250 QLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             HHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence            776665421111                 000       012347899999999999999999999999999

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=7.7e-37  Score=262.51  Aligned_cols=183  Identities=23%  Similarity=0.319  Sum_probs=155.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C---C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K---D   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~---~   69 (302)
                      ||++++.+.    .|+||||++|++|. +++....   .+++..++.++.|++.||.|||++||+||||||    +   +
T Consensus        68 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~  143 (277)
T 3f3z_A           68 IIRLYETFEDNTDIYLVMELCTGGELF-ERVVHKR---VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDS  143 (277)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHH-HHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS
T ss_pred             EeeEEEEEecCCeEEEEEeccCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCC
Confidence            466776655    58999999999999 7776666   799999999999999999999999999999999    4   7


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      .++.+||+|||++...... .......||+.|+|||++.    ..++.++|||||||++|+|++|..||...........
T Consensus       144 ~~~~~~l~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~----~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~  218 (277)
T 3f3z_A          144 PDSPLKLIDFGLAARFKPG-KMMRTKVGTPYYVSPQVLE----GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLK  218 (277)
T ss_dssp             TTCCEEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHT----TCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCcEEEEecccceeccCc-cchhccCCCCCccChHHhc----ccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence            7899999999999876544 3334567999999999984    3488999999999999999999999999888888777


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+.. ....+++.+.+||.+||..||.+|||+.++++
T Consensus       219 ~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          219 IREGTFTFPEK-DWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             HHHCCCCCCHH-HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHhCCCCCCch-hhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            77765444321 12357899999999999999999999999999

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=5.3e-37  Score=283.90  Aligned_cols=183  Identities=23%  Similarity=0.365  Sum_probs=157.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C---C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K---D   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~---~   69 (302)
                      ||++++.+.    .|+|||||.||+|. +.+....   .+++..++.++.||+.||.|||++||+||||||    +   +
T Consensus        88 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~  163 (484)
T 3nyv_A           88 IMKLYEFFEDKGYFYLVGEVYTGGELF-DEIISRK---RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKS  163 (484)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHHTCS---CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS
T ss_pred             CCcEEEEEEeCCEEEEEEecCCCCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCC
Confidence            577777765    58999999999999 7777666   799999999999999999999999999999999    3   5


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      .++.+||+|||++...... ......+||+.|+|||++.    ..|+.++|||||||++|+|++|.+||.+.+.......
T Consensus       164 ~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  238 (484)
T 3nyv_A          164 KDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLH----GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK  238 (484)
T ss_dssp             TTCCEEECCTTHHHHBCCC-CSHHHHTTGGGTCCHHHHH----TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCcEEEEeeeeeEEcccc-cccccCCCCccccCceeec----CCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence            6789999999999876544 2334557999999999984    3589999999999999999999999999999888888


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+ ...+..++..+++||.+||..||.+|||+.++|+
T Consensus       239 i~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          239 VEKGKYTFE-LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             HHHCCCCCC-SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHcCCCCCC-CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            877654433 2334568999999999999999999999999999

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=4.3e-37  Score=269.92  Aligned_cols=208  Identities=23%  Similarity=0.286  Sum_probs=161.1

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC--
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC--   71 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~--   71 (302)
                      ||++++.+.   .|+||||+++|+|. +++....   .+++..++.++.||+.||.|||++||+||||||    ++.+  
T Consensus        77 i~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~  152 (322)
T 2ycf_A           77 IIKIKNFFDAEDYYIVLELMEGGELF-DKVVGNK---RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE  152 (322)
T ss_dssp             BCCEEEEEESSSEEEEEECCTTEETH-HHHSTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSS
T ss_pred             CceEeeEEcCCceEEEEecCCCCcHH-HHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCC
Confidence            456666544   58999999999999 7776665   799999999999999999999999999999999    4443  


Q ss_pred             -CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHH
Q psy3574          72 -GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR-ALFL  149 (302)
Q Consensus        72 -~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~  149 (302)
                       +.+||+|||++...... .......||+.|+|||++.......++.++|||||||++|+|++|..||....... ....
T Consensus       153 ~~~~kl~Dfg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~  231 (322)
T 2ycf_A          153 DCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ  231 (322)
T ss_dssp             SCCEEECCCTTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHH
T ss_pred             CCeEEEccCccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHH
Confidence             45999999999876543 22234578999999999853335668899999999999999999999997654332 2223


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhh
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSK  229 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~  229 (302)
                      +....... ....+..++..+.+||.+||..||.+||++.++++                          ||||....+.
T Consensus       232 ~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~--------------------------h~~~~~~~~~  284 (322)
T 2ycf_A          232 ITSGKYNF-IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR--------------------------HPWLQDEDMK  284 (322)
T ss_dssp             HHHTCCCC-CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT--------------------------SGGGCCHHHH
T ss_pred             HHhCcccc-CchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh--------------------------CcCcCCHHHH
Confidence            33332221 11123457899999999999999999999999999                          9999987776


Q ss_pred             HHHHHHhhhcC
Q psy3574         230 RVAIELLQKVS  240 (302)
Q Consensus       230 ~~~~~~~~~~~  240 (302)
                      ...........
T Consensus       285 ~~~~~~~~~~~  295 (322)
T 2ycf_A          285 RKFQDLLSEEN  295 (322)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHhcccc
Confidence            66655554433

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.6e-36  Score=268.92  Aligned_cols=173  Identities=21%  Similarity=0.245  Sum_probs=145.6

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      +|+||||+ +++|. .++...    .+++..++.++.||+.||+|||++||+||||||    ++.++.+||+|||+++..
T Consensus       105 ~~lv~e~~-~~~L~-~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  178 (367)
T 1cm8_A          105 FYLVMPFM-GTDLG-KLMKHE----KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA  178 (367)
T ss_dssp             CEEEEECC-SEEHH-HHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEecC-CCCHH-HHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence            48999999 77999 777764    599999999999999999999999999999999    888999999999999875


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC-------
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP-------  158 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-------  158 (302)
                      ..   .....++|+.|+|||++.  ....++.++||||+||++|+|++|+.||.+.+....+..+......++       
T Consensus       179 ~~---~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~  253 (367)
T 1cm8_A          179 DS---EMTGYVVTRWYRAPEVIL--NWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL  253 (367)
T ss_dssp             CS---SCCSSCSCGGGCCTHHHH--TTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTC
T ss_pred             cc---ccCcCcCCCCcCCHHHHh--CCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence            43   234567899999999986  235689999999999999999999999999888777766654322211       


Q ss_pred             -------------------CCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         159 -------------------ALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       159 -------------------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                         .......+++.+.+||.+||..||.+|||+.++|+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          254 QSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             SCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             hhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence                               01123456899999999999999999999999999

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.8e-36  Score=263.61  Aligned_cols=204  Identities=37%  Similarity=0.644  Sum_probs=169.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      |+++++.+.    .|+||||+++|+|. +++.. ..   .+++..+..++.||+.||.|||++|++|+||+|    ++.+
T Consensus        86 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~  161 (314)
T 3com_A           86 VVKYYGSYFKNTDLWIVMEYCGAGSVS-DIIRLRNK---TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTE  161 (314)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTEEHH-HHHHHHTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             CccEEEEEEeCCEEEEEeecCCCCCHH-HHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCC
Confidence            466777655    48999999999999 77653 34   799999999999999999999999999999999    7888


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +.+||+|||++..............|++.|+|||++.   +..++.++|||||||++|+|++|..||...........+.
T Consensus       162 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  238 (314)
T 3com_A          162 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ---EIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIP  238 (314)
T ss_dssp             CCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHS---SSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred             CCEEEeecccchhhhhhccccCccCCCCCccChhhcC---CCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHh
Confidence            9999999999987765444445567999999999995   5668899999999999999999999999887776665554


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRV  231 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~  231 (302)
                      ...  .+....+..++..+.+||.+||..||.+|||+.++++                          ||||+.......
T Consensus       239 ~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~--------------------------~~~~~~~~~~~~  290 (314)
T 3com_A          239 TNP--PPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ--------------------------HPFVRSAKGVSI  290 (314)
T ss_dssp             HSC--CCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT--------------------------SHHHHTCCCGGG
T ss_pred             cCC--CcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh--------------------------CHHHhcCCcchH
Confidence            432  2233334567899999999999999999999999999                          999998766655


Q ss_pred             HHHHhhhc
Q psy3574         232 AIELLQKV  239 (302)
Q Consensus       232 ~~~~~~~~  239 (302)
                      ....++..
T Consensus       291 ~~~~~~~~  298 (314)
T 3com_A          291 LRDLINEA  298 (314)
T ss_dssp             GHHHHHHH
T ss_pred             HHHHhhhh
Confidence            55554443

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=2.8e-36  Score=259.84  Aligned_cols=184  Identities=24%  Similarity=0.364  Sum_probs=155.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC---
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD---   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~---   69 (302)
                      |+++++.+.    .|+||||++||+|. ..+....   .+++..+..++.|++.||.|||++||+||||||    ++   
T Consensus        67 i~~~~~~~~~~~~~~~v~e~~~~~~l~-~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~  142 (284)
T 3kk8_A           67 IVRLHDSIQEESFHYLVFDLVTGGELF-EDIVARE---FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA  142 (284)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSS
T ss_pred             cCeEEEEEEcCCEEEEEEecCCCCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCC
Confidence            466666655    48999999999999 6666555   699999999999999999999999999999999    43   


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      ..+.+||+|||++...... .......|++.|+|||++.   +..++.++||||||+++|+|++|..||.+.........
T Consensus       143 ~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~  218 (284)
T 3kk8_A          143 KGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPEVLK---KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ  218 (284)
T ss_dssp             TTCCEEECCCTTCEECCSS-CBCCCSCSCGGGCCHHHHT---TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCcEEEeeceeeEEcccC-ccccCCCCCcCCcCchhhc---CCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHH
Confidence            3455999999999776554 2334567999999999995   66689999999999999999999999999888888777


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+. .....+++.+.+||.+||..||.+|||+.++++
T Consensus       219 ~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          219 IKAGAYDYPS-PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             HHHTCCCCCT-TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHhccccCCc-hhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            7776554443 223567999999999999999999999999999

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=7.4e-37  Score=276.83  Aligned_cols=189  Identities=19%  Similarity=0.203  Sum_probs=135.8

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhccc------cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGIT------AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-   67 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~~------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-   67 (302)
                      ||++++.|.      .|+||||+.+ +|. +++.....      ...+++..++.++.||+.||+|||++||+|||||| 
T Consensus        80 iv~~~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~  157 (405)
T 3rgf_A           80 VISLQKVFLSHADRKVWLLFDYAEH-DLW-HIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPA  157 (405)
T ss_dssp             BCCCCEEEEETTTTEEEEEEECCSE-EHH-HHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred             eeeEeeEEecCCCCeEEEEEeCCCC-CHH-HHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHH
Confidence            567777663      5899999986 777 55543210      11489999999999999999999999999999999 


Q ss_pred             ---C----CCCCCEEEecccccccccccc---ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCC
Q psy3574          68 ---K----DRCGDVKLADFGVSAQITATI---NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPP  137 (302)
Q Consensus        68 ---~----~~~~~ikL~DFg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p  137 (302)
                         +    +..+.+||+|||+++......   ......+||+.|+|||++.  ....|+.++|||||||++|+|++|.+|
T Consensus       158 NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~~DiwSlG~il~ell~g~~p  235 (405)
T 3rgf_A          158 NILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL--GARHYTKAIDIWAIGCIFAELLTSEPI  235 (405)
T ss_dssp             GEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHT--TCCSCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             HeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhc--CCCcccchhhhHHHHHHHHHHHhCCCC
Confidence               4    677999999999998765432   2234567999999999986  234589999999999999999999999


Q ss_pred             CCCCCh---------HHHHHHHHhcCCCCCCCC---------------------------------CCCCCCHHHHHHHH
Q psy3574         138 MFDLHP---------MRALFLMSKSGFKPPALK---------------------------------DKDRWSSTFHNFVK  175 (302)
Q Consensus       138 f~~~~~---------~~~~~~i~~~~~~~~~~~---------------------------------~~~~~s~~~~~li~  175 (302)
                      |.+...         ...+..+......++...                                 .....+..+.+||.
T Consensus       236 f~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~  315 (405)
T 3rgf_A          236 FHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQ  315 (405)
T ss_dssp             TCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHH
T ss_pred             CCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHH
Confidence            976543         233333333211111100                                 00112678999999


Q ss_pred             HhhhcCCCCCCCHHHHHH
Q psy3574         176 IALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       176 ~~L~~dp~~R~t~~~ll~  193 (302)
                      +||..||.+|||++++|+
T Consensus       316 ~~L~~dP~~R~ta~e~L~  333 (405)
T 3rgf_A          316 KLLTMDPIKRITSEQAMQ  333 (405)
T ss_dssp             HHSCSSGGGSCCHHHHHT
T ss_pred             HHccCCcccCCCHHHHhc
Confidence            999999999999999999

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=1.8e-36  Score=260.52  Aligned_cols=179  Identities=19%  Similarity=0.270  Sum_probs=151.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++|+|. +++....   .+++..+..++.||+.||+|||++||+||||+|    ++.++
T Consensus        71 i~~~~~~~~~~~~~~lv~e~~~~~~l~-~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~  146 (279)
T 3fdn_A           71 ILRLYGYFHDATRVYLILEYAPLGTVY-RELQKLS---KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG  146 (279)
T ss_dssp             BCCEEEEEECSSEEEEEECCCTTEEHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTS
T ss_pred             CcchhheEecCCEEEEEEecCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCC
Confidence            466776655    58999999999999 7777666   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++......  ......|++.|+|||++.   +..++.++||||||+++|+|++|..||...........+..
T Consensus       147 ~~~l~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  221 (279)
T 3fdn_A          147 ELKIADFGWSVHAPSS--RRTDLCGTLDYLPPEMIE---GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR  221 (279)
T ss_dssp             CEEECSCCEESCC----------CCCCTTCCHHHHT---TCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH
T ss_pred             CEEEEeccccccCCcc--cccccCCCCCccCHhHhc---cCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh
Confidence            9999999998655432  233457899999999985   66688999999999999999999999998888887777766


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....     +..++..+.+||.+||..||.+|||+.++++
T Consensus       222 ~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          222 VEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             TCCCC-----CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CCCCC-----CCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            54433     3557899999999999999999999999999

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=4.1e-36  Score=259.73  Aligned_cols=181  Identities=20%  Similarity=0.274  Sum_probs=149.3

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCC--CCCCCCcC---
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG--FKPPALKD---   67 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--i~Hrdlkp---   67 (302)
                      ||++++.+.        .|+||||+++|+|. +++....   .+++..++.++.||+.||.|||++|  |+||||||   
T Consensus        87 iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Ni  162 (290)
T 1t4h_A           87 IVRFYDSWESTVKGKKCIVLVTELMTSGTLK-TYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNI  162 (290)
T ss_dssp             BCCEEEEEEEESSSCEEEEEEEECCCSCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGE
T ss_pred             eeeeeeeeccccCCCceEEEEEEecCCCCHH-HHHHHcc---CCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHE
Confidence            467776543        58999999999999 7887766   7999999999999999999999999  99999999   


Q ss_pred             -CC-CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          68 -KD-RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        68 -~~-~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                       ++ .++.+||+|||++......  ......|++.|+|||++.    ..++.++|||||||++|+|++|..||.......
T Consensus       163 l~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~t~~y~aPE~~~----~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~  236 (290)
T 1t4h_A          163 FITGPTGSVKIGDLGLATLKRAS--FAKAVIGTPEFMAPEMYE----EKYDESVDVYAFGMCMLEMATSEYPYSECQNAA  236 (290)
T ss_dssp             EESSTTSCEEECCTTGGGGCCTT--SBEESCSSCCCCCGGGGG----TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH
T ss_pred             EEECCCCCEEEeeCCCccccccc--ccccccCCcCcCCHHHHh----ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH
Confidence             54 7899999999999755432  233457999999999883    458999999999999999999999998866555


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...........+.  ......++.+.+||.+||..||.+|||+.++++
T Consensus       237 ~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          237 QIYRRVTSGVKPA--SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHTTTCCCG--GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhccCCcc--ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            5544444332222  223456789999999999999999999999999

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=3.3e-36  Score=261.58  Aligned_cols=204  Identities=39%  Similarity=0.644  Sum_probs=162.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.+.    .|+||||+++|+|. .++.. ..   .+++..++.++.||+.||.|||++|++||||+|    ++.+
T Consensus        78 i~~~~~~~~~~~~~~lv~e~~~~~~l~-~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~  153 (302)
T 2j7t_A           78 IVKLLGAYYHDGKLWIMIEFCPGGAVD-AIMLELDR---GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLE  153 (302)
T ss_dssp             BCCEEEEEECC-CEEEEEECCTTEEHH-HHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTT
T ss_pred             EeeeeeeeeeCCeEEEEEEeCCCCcHH-HHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCC
Confidence            466676654    58999999999999 66654 34   699999999999999999999999999999999    7888


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhccccc--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      +.+||+|||++..............|++.|+|||++...  ....++.++|||||||++|+|++|..||...+.......
T Consensus       154 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  233 (302)
T 2j7t_A          154 GDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK  233 (302)
T ss_dssp             SCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred             CCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHH
Confidence            999999999976544332333456799999999998421  245678999999999999999999999998888777766


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhh
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSK  229 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~  229 (302)
                      +.....  +....+..++..+.++|.+||..||.+|||+.++++                          ||||....+.
T Consensus       234 ~~~~~~--~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~--------------------------h~~~~~~~~~  285 (302)
T 2j7t_A          234 IAKSDP--PTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE--------------------------HPFVSSITSN  285 (302)
T ss_dssp             HHHSCC--CCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT--------------------------STTTTTCCCC
T ss_pred             HhccCC--cccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc--------------------------ChHHhhhccc
Confidence            665432  223334667999999999999999999999999999                          9999987665


Q ss_pred             HHHHHHh
Q psy3574         230 RVAIELL  236 (302)
Q Consensus       230 ~~~~~~~  236 (302)
                      ......+
T Consensus       286 ~~~~~~~  292 (302)
T 2j7t_A          286 KALRELV  292 (302)
T ss_dssp             HHHHHHH
T ss_pred             hhHHHHH
Confidence            5444433

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=3e-36  Score=267.53  Aligned_cols=181  Identities=33%  Similarity=0.582  Sum_probs=151.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHH-HhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIW-AVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~-~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.+.    .|+||||+.| +|. +++ ....   .+++..+..++.|++.||.|||++||+||||||    ++.+
T Consensus       116 iv~~~~~~~~~~~~~lv~e~~~g-~l~-~~l~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~  190 (348)
T 1u5q_A          116 TIQYRGCYLREHTAWLVMEYCLG-SAS-DLLEVHKK---PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP  190 (348)
T ss_dssp             BCCEEEEEEETTEEEEEEECCSE-EHH-HHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT
T ss_pred             EeeEEEEEEECCeEEEEEecCCC-CHH-HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC
Confidence            567777665    5899999985 777 455 4444   799999999999999999999999999999999    7888


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +.+||+|||++......    ...+||+.|+|||++.+.....++.++|||||||++|+|++|..||.+.+.......+.
T Consensus       191 ~~~kL~DfG~a~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~  266 (348)
T 1u5q_A          191 GLVKLGDFGSASIMAPA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA  266 (348)
T ss_dssp             TEEEECCCTTCBSSSSB----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred             CCEEEeeccCceecCCC----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            99999999999766432    34579999999999854335668899999999999999999999999888887777766


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .......   ....++..+.+||.+||..||.+|||+.++++
T Consensus       267 ~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          267 QNESPAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             HSCCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             hcCCCCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            6543222   23567999999999999999999999999999

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=1.3e-36  Score=282.60  Aligned_cols=183  Identities=22%  Similarity=0.320  Sum_probs=155.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    +|+|||||+||+|. +.+....   .+++..++.++.||+.||.|||++||+||||||    ++..+
T Consensus       108 iv~~~~~~~~~~~~~lv~e~~~gg~L~-~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~  183 (504)
T 3q5i_A          108 IIKLFDVFEDKKYFYLVTEFYEGGELF-EQIINRH---KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKN  183 (504)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHH-HHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTT
T ss_pred             CCeEEEEEEcCCEEEEEEecCCCCcHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCC
Confidence            567777666    58999999999999 6666655   799999999999999999999999999999999    44443


Q ss_pred             ---CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          73 ---DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        73 ---~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                         .+||+|||++...... ......+||+.|+|||++.    ..|+.++||||+||++|+|++|.+||.+.+.......
T Consensus       184 ~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  258 (504)
T 3q5i_A          184 SLLNIKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLK----KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKK  258 (504)
T ss_dssp             CCSSEEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHT----TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCccEEEEECCCCEEcCCC-CccccccCCcCCCCHHHhc----cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence               7999999999876554 3344567999999999983    4589999999999999999999999999998888888


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+. ..+..++.++++||.+||..||.+|||+.++|+
T Consensus       259 i~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          259 VEKGKYYFDF-NDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             HHHCCCCCCH-HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHcCCCCCCc-cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            8776543331 223568999999999999999999999999999

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=1.8e-36  Score=264.99  Aligned_cols=188  Identities=21%  Similarity=0.294  Sum_probs=142.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    +|+||||++||+|. +++....   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        73 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~  148 (316)
T 2ac3_A           73 VLELIEFFEEEDRFYLVFEKMRGGSIL-SHIHKRR---HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPN  148 (316)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSS
T ss_pred             eeeEEEEEeeCCEEEEEEEcCCCCcHH-HHHhccC---CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCC
Confidence            567777665    58999999999999 7777666   799999999999999999999999999999999    54444


Q ss_pred             C---EEEecccccccccccc-------ccccccccCcccchhhccccc--ccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q psy3574          73 D---VKLADFGVSAQITATI-------NKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAIELAELQPPMFD  140 (302)
Q Consensus        73 ~---ikL~DFg~a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~  140 (302)
                      .   +||+|||++.......       ......+||+.|+|||++...  ....++.++|||||||++|+|++|..||.+
T Consensus       149 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  228 (316)
T 2ac3_A          149 QVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG  228 (316)
T ss_dssp             SSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcc
Confidence            4   9999999987654221       112245699999999998521  013478899999999999999999999976


Q ss_pred             CCh---------------HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         141 LHP---------------MRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       141 ~~~---------------~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...               ......+.......+. .....++..+.+||.+||..||.+|||+.++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          229 RCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD-KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             CCCSCSCC----CCHHHHHHHHHHHHHCCCCCCH-HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cccccccccccccchhHHHHHHHHHhccCcccCc-hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            542               2233444444333221 112457899999999999999999999999999

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=1.1e-36  Score=268.32  Aligned_cols=187  Identities=19%  Similarity=0.233  Sum_probs=146.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++++|. .+.....   .+++..+..++.||+.||.|||++||+||||||    ++.++
T Consensus        86 iv~~~~~~~~~~~~~lv~e~~~~~~l~-~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~  161 (331)
T 4aaa_A           86 LVNLLEVCKKKKRWYLVFEFVDHTILD-DLELFPN---GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSG  161 (331)
T ss_dssp             BCCEEEEEEETTEEEEEEECCSEEHHH-HHHHSTT---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             EeeEEEEeecCCEEEEEEecCCcchHH-HHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCC
Confidence            466777655    58999999998888 7777666   799999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............|++.|+|||++.  ....++.++|||||||++|+|++|..||.+.........+..
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  239 (331)
T 4aaa_A          162 VVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLV--GDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMM  239 (331)
T ss_dssp             CEEECCCTTC------------CCCCCTTCCHHHHT--TCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             cEEEEeCCCceeecCCccccCCCcCCccccCccccc--CCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Confidence            999999999987665444445567999999999985  233688999999999999999999999998887766655443


Q ss_pred             cCC-------------------CCCCCC-------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGF-------------------KPPALK-------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~-------------------~~~~~~-------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...                   ..+...       ....++..+.+||.+||..||.+|||+.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          240 CLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             HHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            111                   111110       12357899999999999999999999999999

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=2.4e-36  Score=268.31  Aligned_cols=178  Identities=17%  Similarity=0.180  Sum_probs=143.3

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+++ +|...+.....   .+++.+++.++.||+.||+|||++||+||||||    ++.++.+||+|||+++..
T Consensus        99 ~~lv~e~~~~-~l~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~  174 (351)
T 3mi9_A           99 IYLVFDFCEH-DLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF  174 (351)
T ss_dssp             EEEEEECCSE-EHHHHHHCTTS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEeccCC-CHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence            5899999987 77734444334   699999999999999999999999999999999    888999999999999876


Q ss_pred             ccc----cccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCC
Q psy3574          86 TAT----INKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK  161 (302)
Q Consensus        86 ~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  161 (302)
                      ...    .......+||+.|+|||++.  ....++.++|||||||++|+|++|.+||.+.........+.......+...
T Consensus       175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  252 (351)
T 3mi9_A          175 SLAKNSQPNRYTNRVVTLWYRPPELLL--GERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV  252 (351)
T ss_dssp             CCCSSSSCCCCCSSCSCGGGCCHHHHT--TCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred             cccccccccccCCcccccCccCchhhc--CCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhh
Confidence            432    12234457899999999985  234589999999999999999999999999888877776665332222111


Q ss_pred             CCC---------------------------CCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         162 DKD---------------------------RWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       162 ~~~---------------------------~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+.                           ..++.+.+||.+||..||.+|||+.++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             STTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence            100                           02678999999999999999999999999

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=8.6e-36  Score=260.37  Aligned_cols=188  Identities=21%  Similarity=0.272  Sum_probs=148.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCC--CCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG--FKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--i~Hrdlkp----~~~   70 (302)
                      ||++++.+.    .|+||||++||+|. +++........+++..+..++.||+.||+|||++|  |+||||||    ++.
T Consensus        96 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~  174 (309)
T 3p86_A           96 IVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDK  174 (309)
T ss_dssp             BCCEEEEECSTTCCEEEEECCTTCBHH-HHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECT
T ss_pred             EeeEEEEEEECCceEEEEecCCCCcHH-HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeC
Confidence            467777665    48999999999999 88876653335999999999999999999999999  99999999    888


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      ++.+||+|||+++.............||+.|+|||++.   +..++.++|||||||++|+|++|..||.+.+.......+
T Consensus       175 ~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~  251 (309)
T 3p86_A          175 KYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLR---DEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV  251 (309)
T ss_dssp             TCCEEECCCC-----------------CCTTSCHHHHT---TCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH
T ss_pred             CCcEEECCCCCCccccccccccccCCCCccccChhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            99999999999986554433345567999999999996   666899999999999999999999999988887777666


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .......   ..+..+++.+.+||.+||..||.+|||+.++++.+
T Consensus       252 ~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L  293 (309)
T 3p86_A          252 GFKCKRL---EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL  293 (309)
T ss_dssp             HHSCCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HhcCCCC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            5433222   23467899999999999999999999999999844

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=1.1e-36  Score=271.42  Aligned_cols=184  Identities=22%  Similarity=0.255  Sum_probs=147.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC---
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD---   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~---   69 (302)
                      ||++++.+.    .|+||||+ +++|. +++.... ...+++..++.++.||+.||+|||++||+||||||    ++   
T Consensus        98 iv~~~~~~~~~~~~~lv~e~~-~~~L~-~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~  174 (360)
T 3llt_A           98 IVKYHGKFMYYDHMCLIFEPL-GPSLY-EIITRNN-YNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPY  174 (360)
T ss_dssp             BCCEEEEEEETTEEEEEECCC-CCBHH-HHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTT
T ss_pred             eecccceeeECCeeEEEEcCC-CCCHH-HHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcccc
Confidence            567777665    48999999 88999 6766543 12589999999999999999999999999999999    43   


Q ss_pred             ----------------------CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHH
Q psy3574          70 ----------------------RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT  127 (302)
Q Consensus        70 ----------------------~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~i  127 (302)
                                            ..+.+||+|||++.....   .....+||+.|+|||++.   +..++.++|||||||+
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~---~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~i  248 (360)
T 3llt_A          175 FEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD---YHGSIINTRQYRAPEVIL---NLGWDVSSDMWSFGCV  248 (360)
T ss_dssp             CCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS---CCCSCCSCGGGCCHHHHT---TCCCCTTHHHHHHHHH
T ss_pred             ccccccchhcccccccccccccCCCCEEEEeccCceecCC---CCcCccCcccccCcHHHc---CCCCCCccchHHHHHH
Confidence                                  378999999999976543   234567999999999996   6679999999999999


Q ss_pred             HHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCC---------------------CC--------------------CCC
Q psy3574         128 AIELAELQPPMFDLHPMRALFLMSKSGFKPPALK---------------------DK--------------------DRW  166 (302)
Q Consensus       128 l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~---------------------~~--------------------~~~  166 (302)
                      +|+|++|+.||......+....+.......+...                     .+                    ...
T Consensus       249 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  328 (360)
T 3llt_A          249 LAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIK  328 (360)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCC
T ss_pred             HHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccch
Confidence            9999999999998887777666655332222100                     00                    012


Q ss_pred             CHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         167 SSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       167 s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +..+.+||.+||+.||.+|||+.++|+
T Consensus       329 ~~~l~~li~~~L~~dP~~Rpta~elL~  355 (360)
T 3llt_A          329 HELFCDFLYSILQIDPTLRPSPAELLK  355 (360)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            367889999999999999999999999

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.2e-36  Score=262.33  Aligned_cols=188  Identities=35%  Similarity=0.620  Sum_probs=145.9

Q ss_pred             Cchhhhcch----------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---
Q psy3574           1 MSRVFNHFL----------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---   67 (302)
Q Consensus         1 iv~~~~~~~----------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---   67 (302)
                      |+++++.+.          .|+||||+++|+|. +++.... ...+++..++.++.||+.||.|||++||+||||+|   
T Consensus        83 i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NI  160 (326)
T 2x7f_A           83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVT-DLIKNTK-GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNV  160 (326)
T ss_dssp             BCCEEEEEEECC--CCCCEEEEEEECCTTEEHH-HHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGE
T ss_pred             eeeeeeEEeeccCccccceEEEEEEcCCCCcHH-HHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHE
Confidence            466676653          58999999999999 7776542 23689999999999999999999999999999999   


Q ss_pred             -CCCCCCEEEeccccccccccccccccccccCcccchhhcccccc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH
Q psy3574          68 -KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVER--KGGYNQQCDIWAVGITAIELAELQPPMFDLHPM  144 (302)
Q Consensus        68 -~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  144 (302)
                       ++.++.+||+|||++..............|++.|+|||++.+..  ...++.++|||||||++|+|++|..||.+....
T Consensus       161 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~  240 (326)
T 2x7f_A          161 LLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM  240 (326)
T ss_dssp             EECTTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred             EEcCCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH
Confidence             88899999999999987654433444567999999999985321  345789999999999999999999999988877


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         145 RALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       145 ~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....+.......   .....++..+.+||.+||..||.+||++.++++
T Consensus       241 ~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          241 RALFLIPRNPAPR---LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HHHHHHHHSCCCC---CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHhhcCcccc---CCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            7766665543221   123567999999999999999999999999999

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=3.5e-36  Score=259.36  Aligned_cols=179  Identities=18%  Similarity=0.229  Sum_probs=154.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++|+|. +++....   .+++..+..++.||+.||.|||++||+||||+|    ++.++
T Consensus        76 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~  151 (284)
T 2vgo_A           76 ILRMYNYFHDRKRIYLMLEFAPRGELY-KELQKHG---RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG  151 (284)
T ss_dssp             BCCEEEEEECSSEEEEEECCCTTEEHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTC
T ss_pred             EeeEEEEEEcCCEEEEEEEeCCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCC
Confidence            466777665    58999999999999 7777666   799999999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++......  ......|++.|+|||++.   +..++.++|+||||+++|+|++|..||...........+..
T Consensus       152 ~~kl~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  226 (284)
T 2vgo_A          152 ELKIADFGWSVHAPSL--RRRTMCGTLDYLPPEMIE---GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN  226 (284)
T ss_dssp             CEEECCCTTCEECSSS--CBCCCCSCGGGCCHHHHT---TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred             CEEEecccccccCccc--ccccccCCCCcCCHHHhc---cCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhc
Confidence            9999999998765442  234567999999999996   56688999999999999999999999998887777766665


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....     +..++..+.++|.+||..||.+||++.++++
T Consensus       227 ~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          227 VDLKF-----PPFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             TCCCC-----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccCC-----CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            44322     3567999999999999999999999999999

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=2e-36  Score=267.23  Aligned_cols=181  Identities=19%  Similarity=0.304  Sum_probs=156.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++++|. +++....   .+++.+++.++.||+.||.|||++||+||||||    ++.++
T Consensus       103 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~  178 (335)
T 2owb_A          103 VVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRK---ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL  178 (335)
T ss_dssp             BCCEEEEEECSSEEEEEECCCTTCBHH-HHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             CCeEEEEEecCCeEEEEEecCCCCCHH-HHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCC
Confidence            567777665    58999999999999 7777766   799999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............|+..|+|||++.   +..++.++|||||||++|+|++|..||...........+..
T Consensus       179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  255 (335)
T 2owb_A          179 EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS---KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK  255 (335)
T ss_dssp             CEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHH---TSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH
T ss_pred             CEEEeeccCceecccCcccccccCCCccccCHHHhc---cCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhc
Confidence            999999999987764434445567999999999995   66688999999999999999999999998887777766666


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....     +..++..+.+||.+||..||.+||++.++++
T Consensus       256 ~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          256 NEYSI-----PKHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             TCCCC-----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             CCCCC-----CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            54332     3567899999999999999999999999999

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=7e-36  Score=260.07  Aligned_cols=183  Identities=20%  Similarity=0.265  Sum_probs=154.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C---C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K---D   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~---~   69 (302)
                      |+++++.+.    .|+||||++||+|. +++...+   .+++..+..++.|++.||.|||++||+||||+|    +   +
T Consensus        68 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~  143 (304)
T 2jam_A           68 IVTLEDIYESTTHYYLVMQLVSGGELF-DRILERG---VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPE  143 (304)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSS
T ss_pred             eeehhhhcccCCEEEEEEEcCCCccHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCC
Confidence            456666554    58999999999999 7776666   799999999999999999999999999999999    3   6


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      .++.+||+|||++......  ......|++.|+|||++.   +..++.++|||||||++|+|++|..||...........
T Consensus       144 ~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  218 (304)
T 2jam_A          144 ENSKIMITDFGLSKMEQNG--IMSTACGTPGYVAPEVLA---QKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEK  218 (304)
T ss_dssp             TTCCEEBCSCSTTCCCCCB--TTHHHHSCCCBCCTTTBS---SCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred             CCCCEEEccCCcceecCCC--ccccccCCCCccChHHhc---cCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence            7899999999998765432  233456899999999995   66789999999999999999999999998888877777


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+. .....++..+.+||.+||..||.+||++.++++
T Consensus       219 i~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          219 IKEGYYEFES-PFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             HHHCCCCCCT-TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHcCCCCCCc-cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            7765543322 234568999999999999999999999999999

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.1e-36  Score=261.63  Aligned_cols=182  Identities=19%  Similarity=0.287  Sum_probs=128.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++++|. +++....  ..+++..++.++.|++.||.|||++||+||||+|    ++.++
T Consensus        73 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~  149 (278)
T 3cok_A           73 ILELYNYFEDSNYVYLVLEMCHNGEMN-RYLKNRV--KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNM  149 (278)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTEEHH-HHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTC
T ss_pred             eEeEEEEEccCCeEEEEEecCCCCcHH-HHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            466666655    48999999999999 7776542  2699999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............|++.|+|||++.   +..++.++|+|||||++|+|++|+.||...........+..
T Consensus       150 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  226 (278)
T 3cok_A          150 NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIAT---RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL  226 (278)
T ss_dssp             CEEECCCTTCEECC-------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCS
T ss_pred             CEEEEeecceeeccCCCCcceeccCCCCcCCcchhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhh
Confidence            999999999987654433344567899999999985   56678999999999999999999999987655444433332


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..     ...+..++.++.++|.+||..||.+||++.++++
T Consensus       227 ~~-----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          227 AD-----YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             SC-----CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cc-----cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            22     1234567999999999999999999999999999

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=3.5e-36  Score=260.68  Aligned_cols=181  Identities=19%  Similarity=0.304  Sum_probs=156.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++++|. +++....   .+++..+..++.|++.||+|||++||+||||+|    ++.++
T Consensus        77 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~  152 (294)
T 2rku_A           77 VVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRK---ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL  152 (294)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHH-HHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             EeeeeeeeccCCEEEEEEecCCCCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCC
Confidence            467777665    58999999999999 7777766   799999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............|++.|+|||++.   +..++.++|+||||+++|+|++|..||......+....+..
T Consensus       153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~  229 (294)
T 2rku_A          153 EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS---KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK  229 (294)
T ss_dssp             CEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHT---TSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred             CEEEEeccCceecccCccccccccCCCCcCCcchhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhh
Confidence            999999999987654434445567999999999985   56688999999999999999999999998887777666655


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....     +..++..+.++|.+||..||.+|||+.++++
T Consensus       230 ~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          230 NEYSI-----PKHINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             TCCCC-----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ccCCC-----ccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            43322     3567899999999999999999999999999

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=5.2e-36  Score=264.63  Aligned_cols=174  Identities=21%  Similarity=0.268  Sum_probs=145.7

Q ss_pred             Cchhhhcch----heeEEEecCCc-chHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGY-NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g-~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.|.    .|+||||+.+| +|. .++....   .+++..++.++.||+.||.|||++||+||||||    ++.+
T Consensus        91 Iv~~~~~~~~~~~~~lv~e~~~~g~~l~-~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~  166 (335)
T 3dls_A           91 IIKVLDIFENQGFFQLVMEKHGSGLDLF-AFIDRHP---RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAED  166 (335)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTSCBHH-HHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             EeeEEEEEeeCCEEEEEEEeCCCCccHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCC
Confidence            567777665    58999999776 998 8888776   799999999999999999999999999999999    8888


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      +.+||+|||++...... ......+||+.|+|||++.   +..+ +.++|||||||++|+|++|..||.....      .
T Consensus       167 ~~~kL~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~  236 (335)
T 3dls_A          167 FTIKLIDFGSAAYLERG-KLFYTFCGTIEYCAPEVLM---GNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------T  236 (335)
T ss_dssp             SCEEECCCTTCEECCTT-CCBCEECSCGGGCCHHHHT---TCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------G
T ss_pred             CcEEEeecccceECCCC-CceeccCCCccccChhhhc---CCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------H
Confidence            99999999999876554 3334567999999999986   4444 7899999999999999999999975321      1


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....     ...+..++.++.+||.+||..||.+|||+.++++
T Consensus       237 ~~~~-----~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~  274 (335)
T 3dls_A          237 VEAA-----IHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT  274 (335)
T ss_dssp             TTTC-----CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             Hhhc-----cCCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1111     1223557999999999999999999999999999

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=3e-36  Score=269.78  Aligned_cols=182  Identities=19%  Similarity=0.211  Sum_probs=136.6

Q ss_pred             Cchhhhcc----------hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---
Q psy3574           1 MSRVFNHF----------LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---   67 (302)
Q Consensus         1 iv~~~~~~----------~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---   67 (302)
                      ||++++.+          ..|+||||+++ +|. +++.  .   .+++..++.++.||+.||.|||++||+||||||   
T Consensus        86 iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~--~---~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NI  158 (371)
T 2xrw_A           86 IIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLC-QVIQ--M---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI  158 (371)
T ss_dssp             BCCEEEEECSCCSTTTCCEEEEEEECCSE-EHH-HHHH--S---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred             ccceEEeeccccccccccceEEEEEcCCC-CHH-HHHh--h---ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHE
Confidence            45666654          35899999986 777 5554  2   588999999999999999999999999999999   


Q ss_pred             -CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH
Q psy3574          68 -KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRA  146 (302)
Q Consensus        68 -~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  146 (302)
                       ++.++.+||+|||+++..... ......+||+.|+|||++.   +..++.++|||||||++|+|++|..||.+.+....
T Consensus       159 l~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  234 (371)
T 2xrw_A          159 VVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVIL---GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ  234 (371)
T ss_dssp             EECTTSCEEECCCCC-----------------CTTCCHHHHT---TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             EEcCCCCEEEEEeecccccccc-cccCCceecCCccCHHHhc---CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence             888899999999999876543 2234567999999999996   56789999999999999999999999999888777


Q ss_pred             HHHHHhcCCCCCC-------------------CC------------CC------CCCCHHHHHHHHHhhhcCCCCCCCHH
Q psy3574         147 LFLMSKSGFKPPA-------------------LK------------DK------DRWSSTFHNFVKIALTKNPKKRPTAD  189 (302)
Q Consensus       147 ~~~i~~~~~~~~~-------------------~~------------~~------~~~s~~~~~li~~~L~~dp~~R~t~~  189 (302)
                      ...+......+..                   ..            .+      ...+..+++||.+||..||.+|||++
T Consensus       235 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~  314 (371)
T 2xrw_A          235 WNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD  314 (371)
T ss_dssp             HHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             HHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHH
Confidence            7666543221110                   00            00      01156799999999999999999999


Q ss_pred             HHHH
Q psy3574         190 KLLQ  193 (302)
Q Consensus       190 ~ll~  193 (302)
                      ++++
T Consensus       315 e~l~  318 (371)
T 2xrw_A          315 EALQ  318 (371)
T ss_dssp             HHHH
T ss_pred             HHhC
Confidence            9999

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=7e-37  Score=273.85  Aligned_cols=176  Identities=9%  Similarity=0.041  Sum_probs=134.7

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccch------hHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQP------PMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADF   79 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~------~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DF   79 (302)
                      .|+||||++ |+|. +++...+  ..+++...      ..++.||+.||+|||++||+||||||    ++.+|.+||+||
T Consensus       163 ~~lv~e~~~-~~L~-~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DF  238 (371)
T 3q60_A          163 YLLLMPAAS-VDLE-LLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDV  238 (371)
T ss_dssp             EEEEECCCS-EEHH-HHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCG
T ss_pred             EEEEecCCC-CCHH-HHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEec
Confidence            689999999 7999 7776643  14544444      57779999999999999999999999    888999999999


Q ss_pred             ccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH--HH--HhcCC
Q psy3574          80 GVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF--LM--SKSGF  155 (302)
Q Consensus        80 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~--~i--~~~~~  155 (302)
                      |+++.....   .....+|+.|+|||++.+. ...|+.++|||||||++|+|++|+.||.+........  ..  .....
T Consensus       239 G~a~~~~~~---~~~~~~t~~y~aPE~~~~~-~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~  314 (371)
T 3q60_A          239 SALWKVGTR---GPASSVPVTYAPREFLNAS-TATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGT  314 (371)
T ss_dssp             GGEEETTCE---EEGGGSCGGGCCHHHHTCS-EEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCC
T ss_pred             ceeeecCCC---ccCccCCcCCcChhhccCC-CCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccc
Confidence            999876532   1134567999999999521 1568999999999999999999999997664321100  00  00001


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         156 KPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       156 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..........++..+.+||.+||..||++|||+.++++
T Consensus       315 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          315 DSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             CSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             cccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            11122223578999999999999999999999999999

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=7e-36  Score=256.29  Aligned_cols=180  Identities=19%  Similarity=0.233  Sum_probs=144.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++++|. +++....   .+++..+..++.||+.||.|||++||+||||+|    ++.++
T Consensus        73 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~  148 (276)
T 2h6d_A           73 IIKLYQVISTPTDFFMVMEYVSGGELF-DYICKHG---RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM  148 (276)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHH-HHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTS
T ss_pred             EeEEEEEEecCCeEEEEEeccCCCcHH-HHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCC
Confidence            456666655    58999999999999 7887766   799999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      .+||+|||++...... .......|++.|+|||++.   +..+ +.++|+||||+++|+|++|..||...........+.
T Consensus       149 ~~~l~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~---~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~  224 (276)
T 2h6d_A          149 NAKIADFGLSNMMSDG-EFLRTSCGSPNYAAPEVIS---GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIR  224 (276)
T ss_dssp             CEEECCCCGGGCCCC--------------CCTGGGT---TSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CEEEeecccccccCCC-cceecccCCccccCHHHHc---CCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhh
Confidence            9999999999876543 2233457899999999985   3333 689999999999999999999998887777766666


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ......     +..++..+.++|.+||..||.+|||+.++++
T Consensus       225 ~~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          225 GGVFYI-----PEYLNRSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             HCCCCC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCcccC-----chhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            543322     3567899999999999999999999999999

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=5.6e-36  Score=273.23  Aligned_cols=177  Identities=22%  Similarity=0.262  Sum_probs=134.2

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+++ +|. .++....   .+++..++.+++||+.||+|||++||+||||||    ++.++.+||+|||+++..
T Consensus       105 ~~lv~e~~~~-~L~-~~~~~~~---~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~  179 (432)
T 3n9x_A          105 LYIVLEIADS-DLK-KLFKTPI---FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI  179 (432)
T ss_dssp             EEEEEECCSE-EHH-HHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEecCCc-CHH-HHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence            5899999975 999 8887766   799999999999999999999999999999999    888999999999999876


Q ss_pred             ccccc----------------------cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhC---------
Q psy3574          86 TATIN----------------------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAEL---------  134 (302)
Q Consensus        86 ~~~~~----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g---------  134 (302)
                      .....                      .....+||+.|+|||++.  ....|+.++|||||||++|+|++|         
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~--~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~  257 (432)
T 3n9x_A          180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL--LQENYTKSIDIWSTGCIFAELLNMLQSHINDPT  257 (432)
T ss_dssp             -------------------------------CCCCCTTCCHHHHT--TCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGG
T ss_pred             cccccccccccccccccccccccchhccccCCCCCccccCHHHHh--cCCCCCcccccchHHHHHHHHHhcccccccccc
Confidence            54321                      135678999999999874  356689999999999999999984         


Q ss_pred             --CCCCCCCC-----------------hHHHHHHHHhcCCCCC---------------------CC-----CCCCCCCHH
Q psy3574         135 --QPPMFDLH-----------------PMRALFLMSKSGFKPP---------------------AL-----KDKDRWSST  169 (302)
Q Consensus       135 --~~pf~~~~-----------------~~~~~~~i~~~~~~~~---------------------~~-----~~~~~~s~~  169 (302)
                        .++|.+..                 ....+..+......++                     ..     .....++++
T Consensus       258 ~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  337 (432)
T 3n9x_A          258 NRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDD  337 (432)
T ss_dssp             GCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHH
T ss_pred             cccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHH
Confidence              44443332                 1222222221110100                     00     012457999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         170 FHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       170 ~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.+||.+||..||.+|||++++|+
T Consensus       338 ~~dLl~~mL~~dP~~R~ta~e~L~  361 (432)
T 3n9x_A          338 GINLLESMLKFNPNKRITIDQALD  361 (432)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHhcCCcccCCCHHHHhc
Confidence            999999999999999999999999

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=9.3e-36  Score=258.31  Aligned_cols=187  Identities=22%  Similarity=0.358  Sum_probs=157.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++|+|. +++....   .+++..+..++.||+.||.|||++|++||||+|    ++.++
T Consensus        86 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~  161 (298)
T 1phk_A           86 IIQLKDTYETNTFFFLVFDLMKKGELF-DYLTEKV---TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM  161 (298)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             EeeeeeeeccCCeEEEEEeccCCCcHH-HHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCC
Confidence            466666655    58999999999999 7887766   799999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhccccc---ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE---RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      .+||+|||++...... .......|++.|+|||++.+.   ....++.++|||||||++|+|++|..||...........
T Consensus       162 ~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~  240 (298)
T 1phk_A          162 NIKLTDFGFSCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRM  240 (298)
T ss_dssp             CEEECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             cEEEecccchhhcCCC-cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHH
Confidence            9999999999876543 233456789999999998532   134578899999999999999999999998888777777


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+. .....++..+.++|.+||..||.+|||+.++++
T Consensus       241 ~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          241 IMSGNYQFGS-PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             HHHTCCCCCT-TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HhcCCcccCc-ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            7665544332 223467999999999999999999999999999

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=9.3e-36  Score=270.81  Aligned_cols=188  Identities=20%  Similarity=0.213  Sum_probs=146.5

Q ss_pred             Cchhhhcch----------heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC--
Q psy3574           1 MSRVFNHFL----------QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD--   67 (302)
Q Consensus         1 iv~~~~~~~----------~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp--   67 (302)
                      ||++++.|.          +++||||+++ +|. .++.. ......+++..++.++.||+.||+|||++||+||||||  
T Consensus       109 iv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N  186 (420)
T 1j1b_A          109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVY-RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQN  186 (420)
T ss_dssp             BCCEEEEEEEEETTTTEEEEEEEEECCCE-EHH-HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGG
T ss_pred             ccceeeEEeccCCCCcceeEEeehhcccc-cHH-HHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhh
Confidence            466665552          5799999987 666 44432 11123799999999999999999999999999999999  


Q ss_pred             --CC-CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH
Q psy3574          68 --KD-RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM  144 (302)
Q Consensus        68 --~~-~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  144 (302)
                        ++ +.+.+||+|||+++..... ......+||+.|+|||++.  ....|+.++|||||||++|+|++|+.||.+.+..
T Consensus       187 ILl~~~~~~~kl~DFG~a~~~~~~-~~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~  263 (420)
T 1j1b_A          187 LLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELIF--GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV  263 (420)
T ss_dssp             EEEETTTTEEEECCCTTCEECCTT-CCCCSCCSCTTSCCHHHHT--TCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             EEEeCCCCeEEeccchhhhhcccC-CCceeeeeCCCcCCHHHHc--CCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence              55 4467899999999876543 2334568999999999986  2346899999999999999999999999998877


Q ss_pred             HHHHHHHhcCC-----------------CCCCCC-------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         145 RALFLMSKSGF-----------------KPPALK-------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       145 ~~~~~i~~~~~-----------------~~~~~~-------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.+..+.....                 ..+...       ....++.++.+||.+||..||.+||++.++++
T Consensus       264 ~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          264 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             HHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence            77666554211                 111110       12356899999999999999999999999999

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=3e-36  Score=263.45  Aligned_cols=178  Identities=25%  Similarity=0.295  Sum_probs=139.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+ +|+|.+.+...+.   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus       119 iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~  194 (311)
T 3p1a_A          119 CVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGA---SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRG  194 (311)
T ss_dssp             BCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGG
T ss_pred             EEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC
Confidence            466776665    58999999 5588844444444   699999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++...... .......||+.|+|||++.    ..++.++|||||||++|+|++|..|+.+.....   .+..
T Consensus       195 ~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~---~~~~  266 (311)
T 3p1a_A          195 RCKLGDFGLLVELGTA-GAGEVQEGDPRYMAPELLQ----GSYGTAADVFSLGLTILEVACNMELPHGGEGWQ---QLRQ  266 (311)
T ss_dssp             CEEECCCTTCEECC-------CCCCCGGGCCGGGGG----TCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH---HHTT
T ss_pred             CEEEccceeeeecccC-CCCcccCCCccccCHhHhc----CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH---HHhc
Confidence            9999999998776543 2334457999999999984    358999999999999999999977766543222   2222


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .. .++  ..+..++..+.+||.+||..||++|||+.++++
T Consensus       267 ~~-~~~--~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          267 GY-LPP--EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             TC-CCH--HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cC-CCc--ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            11 111  123567999999999999999999999999999

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.3e-36  Score=265.81  Aligned_cols=190  Identities=21%  Similarity=0.249  Sum_probs=150.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhc-------------------------------------ccccccccc
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVG-------------------------------------ITAIELAEL   39 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~-------------------------------------~~~~~l~~~   39 (302)
                      ||++++.+.    .|+|||||+||+|. +++...                                     .....+++.
T Consensus        90 iv~~~~~~~~~~~~~lv~e~~~gg~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (345)
T 3hko_A           90 IARLYEVYEDEQYICLVMELCHGGHLL-DKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREK  168 (345)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHH-HHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHH
T ss_pred             cceeehhhccCCeEEEEEeCCCCCcHH-HHHHHhhcccccccccccccccccccccccccccccccccccccccccccHH
Confidence            567777765    48999999999999 666421                                     001245778


Q ss_pred             chhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC--CEEEeccccccccccccc----cccccccCcccchhhcccc
Q psy3574          40 QPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG--DVKLADFGVSAQITATIN----KRKSFIGTPYWMAPEVAAV  109 (302)
Q Consensus        40 ~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~--~ikL~DFg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~  109 (302)
                      .++.++.||+.||+|||++||+||||||    ++.++  .+||+|||++........    ......||+.|+|||++..
T Consensus       169 ~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  248 (345)
T 3hko_A          169 LISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT  248 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhcc
Confidence            8999999999999999999999999999    54444  899999999986543211    2345579999999999852


Q ss_pred             cccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHH
Q psy3574         110 ERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD  189 (302)
Q Consensus       110 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~  189 (302)
                      . ...++.++|||||||++|+|++|+.||.+.........+.......+. .....+++.+.+||.+||..||.+||++.
T Consensus       249 ~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~  326 (345)
T 3hko_A          249 T-NESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFEN-PNYNVLSPLARDLLSNLLNRNVDERFDAM  326 (345)
T ss_dssp             S-SSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTS-GGGGGSCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred             C-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCC-cccccCCHHHHHHHHHHcCCChhHCCCHH
Confidence            1 256889999999999999999999999998888888777776544332 22345789999999999999999999999


Q ss_pred             HHHH
Q psy3574         190 KLLQ  193 (302)
Q Consensus       190 ~ll~  193 (302)
                      ++++
T Consensus       327 ~~l~  330 (345)
T 3hko_A          327 RALQ  330 (345)
T ss_dssp             HHHH
T ss_pred             HHhc
Confidence            9999

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=5.6e-37  Score=275.06  Aligned_cols=166  Identities=16%  Similarity=0.130  Sum_probs=132.3

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccc-------cchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEec
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAE-------LQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLAD   78 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~-------~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~D   78 (302)
                      .|+||||+ +|+|. +++...+   .+++       ..+..++.||+.||+|||++||+||||||    ++.++.+||+|
T Consensus       175 ~~lv~E~~-~g~L~-~~l~~~~---~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~D  249 (377)
T 3byv_A          175 RFFLYPRM-QSNLQ-TFGEVLL---SHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTG  249 (377)
T ss_dssp             EEEEEECC-SEEHH-HHHHHHH---HTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECC
T ss_pred             EEEEEecc-CCCHH-HHHHhcc---ccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEe
Confidence            68999999 57999 7777654   4555       77888999999999999999999999999    88889999999


Q ss_pred             cccccccccccccccccccCcccchhhccccc--------ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          79 FGVSAQITATINKRKSFIGTPYWMAPEVAAVE--------RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        79 Fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      ||+++....   .....+| +.|+|||++.+.        ....|+.++|||||||++|+|++|+.||.+.........+
T Consensus       250 FG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~  325 (377)
T 3byv_A          250 FEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWI  325 (377)
T ss_dssp             GGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGG
T ss_pred             chhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhh
Confidence            999986443   3345577 999999999622        0016899999999999999999999999765443322222


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .         .....++..+.+||.+||..||.+|||+.++++
T Consensus       326 ~---------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          326 F---------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             G---------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             h---------hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            1         112567999999999999999999999999999

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.3e-36  Score=270.59  Aligned_cols=179  Identities=17%  Similarity=0.226  Sum_probs=144.2

Q ss_pred             heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC-CCCCEEEecccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD-RCGDVKLADFGVSA   83 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~-~~~~ikL~DFg~a~   83 (302)
                      +|+||||++| +|. ..+.. ...+..+++..++.++.||+.||+|||++||+||||||    ++ .++.+||+|||+++
T Consensus       113 ~~lv~e~~~~-~L~-~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~  190 (383)
T 3eb0_A          113 LNVIMEYVPD-TLH-KVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAK  190 (383)
T ss_dssp             EEEEECCCSE-EHH-HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCE
T ss_pred             EEEEEecCCc-cHH-HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCc
Confidence            6799999986 777 44432 11123799999999999999999999999999999999    54 68899999999998


Q ss_pred             ccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC------
Q psy3574          84 QITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKP------  157 (302)
Q Consensus        84 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~------  157 (302)
                      ..... .......||+.|+|||++.  ....++.++||||+||++|+|++|+.||.+....+.+..+......+      
T Consensus       191 ~~~~~-~~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~  267 (383)
T 3eb0_A          191 KLIPS-EPSVAYICSRFYRAPELML--GATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMI  267 (383)
T ss_dssp             ECCTT-SCCCCCCCCSSCCCHHHHT--TCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred             ccCCC-CCCcCcccCCCccCHHHhc--CCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence            76544 3344567899999999986  23458999999999999999999999999988887777765421111      


Q ss_pred             -----------CCCC-------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         158 -----------PALK-------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       158 -----------~~~~-------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                 +...       .+..++..+.+||.+||..||.+|||+.++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          268 RMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             HHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                       1100       23457899999999999999999999999999

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=2.9e-35  Score=258.72  Aligned_cols=219  Identities=16%  Similarity=0.094  Sum_probs=163.5

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++++.+.   .|+||||+.+|+|. +++....  ..+++..+..++.||+.||+|||++||+||||||    ++.++.
T Consensus        77 iv~~~~~~~~~~~~~v~e~~~~~~L~-~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~  153 (325)
T 3kex_A           77 IVRLLGLCPGSSLQLVTQYLPLGSLL-DHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQ  153 (325)
T ss_dssp             BCCEEEEECBSSEEEEEECCTTCBSH-HHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSC
T ss_pred             cCeEEEEEcCCccEEEEEeCCCCCHH-HHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCe
Confidence            466777554   58999999999999 6665532  2799999999999999999999999999999999    788899


Q ss_pred             EEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          74 VKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      +||+|||+++.......  ......|+..|+|||++.   ...++.++|||||||++|+|++ |..||.+.........+
T Consensus       154 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~  230 (325)
T 3kex_A          154 VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH---FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL  230 (325)
T ss_dssp             EEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHH
T ss_pred             EEECCCCcccccCcccccccccCCCCcccccChHHhc---cCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHH
Confidence            99999999987654322  223456788999999995   6678999999999999999999 99999887776666665


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKR  230 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~  230 (302)
                      ......    ..+..++..+.++|.+||..||.+||++.++++++............ ........+..+|.+....+..
T Consensus       231 ~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~  305 (325)
T 3kex_A          231 EKGERL----AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLV-IKRESGPGIAPGPEPHGLTNKK  305 (325)
T ss_dssp             HTTCBC----CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSHHHHBC-CCSSSSCCCBCCCCCCC-----
T ss_pred             HcCCCC----CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhhhc-cccCCCCCCCCCCccccchhhc
Confidence            554322    12345788899999999999999999999999987654333222111 1222333456677776655543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=7.5e-36  Score=272.09  Aligned_cols=184  Identities=21%  Similarity=0.219  Sum_probs=146.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+.+ +|. +++.... ...+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus       161 iv~~~~~~~~~~~~~lv~e~~~~-~L~-~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~  237 (429)
T 3kvw_A          161 VIHMLENFTFRNHICMTFELLSM-NLY-ELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQG  237 (429)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCC-BHH-HHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTT
T ss_pred             EEEEEeecccCCeEEEEEeccCC-CHH-HHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCC
Confidence            456666554    4899999975 888 6665543 12589999999999999999999999999999999    66666


Q ss_pred             C--EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          73 D--VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~--ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      .  +||+|||+++....   .....+||+.|+|||++.   +..|+.++|||||||++|+|++|.+||.+.+..+.+..+
T Consensus       238 ~~~vkL~DFG~a~~~~~---~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i  311 (429)
T 3kvw_A          238 RSGIKVIDFGSSCYEHQ---RVYTYIQSRFYRAPEVIL---GARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACM  311 (429)
T ss_dssp             SCCEEECCCTTCEETTC---CCCSSCSCGGGCCHHHHH---TBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CcceEEeecccceecCC---cccccCCCCCccChHHHh---CCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            6  99999999976543   234568999999999996   666899999999999999999999999998887776665


Q ss_pred             HhcCCCCCCC-------------------------------------------------C-----CCCCCCHHHHHHHHH
Q psy3574         151 SKSGFKPPAL-------------------------------------------------K-----DKDRWSSTFHNFVKI  176 (302)
Q Consensus       151 ~~~~~~~~~~-------------------------------------------------~-----~~~~~s~~~~~li~~  176 (302)
                      ......++..                                                 .     .....++.+.+||.+
T Consensus       312 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~  391 (429)
T 3kvw_A          312 IELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQ  391 (429)
T ss_dssp             HHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHH
T ss_pred             HHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHH
Confidence            5421111100                                                 0     011237889999999


Q ss_pred             hhhcCCCCCCCHHHHHH
Q psy3574         177 ALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       177 ~L~~dp~~R~t~~~ll~  193 (302)
                      ||..||.+|||+.++|+
T Consensus       392 ~L~~dP~~Rpta~e~L~  408 (429)
T 3kvw_A          392 CLEWDPAVRMTPGQALR  408 (429)
T ss_dssp             HTCSSTTTSCCHHHHHT
T ss_pred             HCCCChhhCCCHHHHhC
Confidence            99999999999999999

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=1.2e-35  Score=267.45  Aligned_cols=185  Identities=18%  Similarity=0.279  Sum_probs=143.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---CCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---~~~~~~   73 (302)
                      ||++|+.+.    .|+||| +.+|+|. +++....   .+++.+++.++.||+.||.|||++||+||||||   +-.++.
T Consensus       118 iv~~~~~~~~~~~~~lv~E-~~~~~L~-~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~  192 (390)
T 2zmd_A          118 IIRLYDYEITDQYIYMVME-CGNIDLN-SWLKKKK---SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM  192 (390)
T ss_dssp             BCCEEEEEECSSEEEEEEE-CCSEEHH-HHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSC
T ss_pred             EEEEEEEEecCCEEEEEEe-cCCCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCe
Confidence            567776655    589999 6678999 8887766   789999999999999999999999999999999   335689


Q ss_pred             EEEeccccccccccccc--cccccccCcccchhhccccc--------ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh
Q psy3574          74 VKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVE--------RKGGYNQQCDIWAVGITAIELAELQPPMFDLHP  143 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~--------~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  143 (302)
                      +||+|||+++.......  .....+||+.|+|||++.+.        ....|+.++|||||||++|+|++|..||.....
T Consensus       193 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~  272 (390)
T 2zmd_A          193 LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN  272 (390)
T ss_dssp             EEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred             EEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH
Confidence            99999999987654322  23456799999999998521        113588999999999999999999999987543


Q ss_pred             -HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         144 -MRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       144 -~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                       ...+..+.......   ..+...+..+.+||.+||..||.+||++.++++
T Consensus       273 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          273 QISKLHAIIDPNHEI---EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             HHHHHHHHHCTTSCC---CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHhCccccC---CCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence             34444444432222   223455889999999999999999999999999

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=3e-36  Score=263.34  Aligned_cols=185  Identities=21%  Similarity=0.305  Sum_probs=149.3

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~   68 (302)
                      ||++++.+.        .|+||||++||+|. +++...+   .+++..+..++.||+.||.|||++||+||||||    +
T Consensus        74 iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~-~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~  149 (311)
T 3ork_A           74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLR-DIVHTEG---PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI  149 (311)
T ss_dssp             BCCEEEEEEEEETTEEEEEEEEECCCEEEHH-HHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred             cceEEEeeeccCCCCcccEEEEecCCCCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEE
Confidence            567777655        28999999999999 8887776   799999999999999999999999999999999    7


Q ss_pred             CCCCCEEEeccccccccccccc---cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          69 DRCGDVKLADFGVSAQITATIN---KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        69 ~~~~~ikL~DFg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                      +.++.+||+|||++........   .....+||+.|+|||++.   +..++.++|||||||++|+|++|+.||.+.....
T Consensus       150 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~  226 (311)
T 3ork_A          150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR---GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS  226 (311)
T ss_dssp             ETTSCEEECCCSCC------------------CCTTCCHHHHH---TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             cCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhc---CCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            7889999999999986654321   223456899999999995   6678999999999999999999999999988887


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+......++. .....++.++.++|.+||..||.+||++.+++.
T Consensus       227 ~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~  273 (311)
T 3ork_A          227 VAYQHVREDPIPPS-ARHEGLSADLDAVVLKALAKNPENRYQTAAEMR  273 (311)
T ss_dssp             HHHHHHHCCCCCHH-HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred             HHHHHhcCCCCCcc-cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence            77666665433321 223567999999999999999999999999999

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1e-35  Score=263.61  Aligned_cols=185  Identities=18%  Similarity=0.284  Sum_probs=141.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---CCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---~~~~~~   73 (302)
                      ||++|+.+.    .|+||| +.+|+|. +++....   .+++.+++.++.||+.||.|||++||+||||||   +-.++.
T Consensus        71 iv~~~~~~~~~~~~~lv~e-~~~~~L~-~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~~  145 (343)
T 3dbq_A           71 IIRLYDYEITDQYIYMVME-CGNIDLN-SWLKKKK---SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM  145 (343)
T ss_dssp             BCCEEEEEECSSEEEEEEC-CCSEEHH-HHHHHSC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTE
T ss_pred             eEEEeeeEeeCCEEEEEEe-CCCCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEECCc
Confidence            466777665    489999 5677999 7777766   799999999999999999999999999999999   334688


Q ss_pred             EEEeccccccccccccc--cccccccCcccchhhccccc--------ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh
Q psy3574          74 VKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVE--------RKGGYNQQCDIWAVGITAIELAELQPPMFDLHP  143 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~--------~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  143 (302)
                      +||+|||+++.......  .....+||+.|+|||++.+.        ....++.++|||||||++|+|++|..||.....
T Consensus       146 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  225 (343)
T 3dbq_A          146 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN  225 (343)
T ss_dssp             EEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred             EEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh
Confidence            99999999987654322  22356799999999998521        125688999999999999999999999987543


Q ss_pred             H-HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         144 M-RALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       144 ~-~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      . .....+.....   ....+...+..+.+||.+||..||.+|||+.++++
T Consensus       226 ~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          226 QISKLHAIIDPNH---EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             HHHHHHHHHCTTS---CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHhcCCc---ccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence            3 33333333222   22234556789999999999999999999999999

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=8.4e-36  Score=265.64  Aligned_cols=181  Identities=24%  Similarity=0.405  Sum_probs=146.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC-CCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS-GFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp----~~~~   71 (302)
                      ||++++.+.    .|+||||++||+|. +++....   .+++..+..++.|++.||.|||++ ||+||||||    ++.+
T Consensus        93 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~  168 (360)
T 3eqc_A           93 IVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAG---RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR  168 (360)
T ss_dssp             BCCEEEEEEETTEEEEEECCCTTCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTT
T ss_pred             EEEEeEEEEECCEEEEEEECCCCCCHH-HHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCC
Confidence            567777665    58999999999999 8887776   799999999999999999999996 999999999    8888


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM-  150 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i-  150 (302)
                      +.+||+|||++......  ......||+.|+|||++.   +..++.++|||||||++|+|++|..||...+.......+ 
T Consensus       169 ~~~kl~Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  243 (360)
T 3eqc_A          169 GEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQ---GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG  243 (360)
T ss_dssp             CCEEECCCCCCHHHHHH--C----CCCCTTCCHHHHT---TCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC
T ss_pred             CCEEEEECCCCcccccc--cccCCCCCCCeECHHHHc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhc
Confidence            99999999998766442  233557999999999996   667899999999999999999999999876654432211 


Q ss_pred             -----------------------------------------HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHH
Q psy3574         151 -----------------------------------------SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD  189 (302)
Q Consensus       151 -----------------------------------------~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~  189 (302)
                                                               ....  .+ ......++.++.+||.+||..||.+|||+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  320 (360)
T 3eqc_A          244 CQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEP--PP-KLPSGVFSLEFQDFVNKCLIKNPAERADLK  320 (360)
T ss_dssp             ------------------------------CCCHHHHHHHHHHSC--CC-CCCTTTSCHHHHHHHHHHHCSSTTTSCCHH
T ss_pred             ccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccC--CC-CCCcccccHHHHHHHHHHhhcChhhCCCHH
Confidence                                                     1111  11 111245789999999999999999999999


Q ss_pred             HHHH
Q psy3574         190 KLLQ  193 (302)
Q Consensus       190 ~ll~  193 (302)
                      ++++
T Consensus       321 ell~  324 (360)
T 3eqc_A          321 QLMV  324 (360)
T ss_dssp             HHHT
T ss_pred             HHhh
Confidence            9999

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=4.4e-35  Score=257.20  Aligned_cols=186  Identities=21%  Similarity=0.208  Sum_probs=151.7

Q ss_pred             Cchhhhcch---------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----
Q psy3574           1 MSRVFNHFL---------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----   67 (302)
Q Consensus         1 iv~~~~~~~---------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----   67 (302)
                      ||++++.+.         .|+||||+.| +|. +++.... ...+++..++.++.||+.||.|||++||+||||||    
T Consensus        76 i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~-~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nil  152 (326)
T 1blx_A           76 VVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLT-TYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNIL  152 (326)
T ss_dssp             BCCEEEEEEEEECSSEEEEEEEEECCSC-BHH-HHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred             eEeeeeeeeecccCCCceEEEEEecCCC-CHH-HHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeE
Confidence            466776554         5899999985 999 6666543 12489999999999999999999999999999999    


Q ss_pred             CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy3574          68 KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRAL  147 (302)
Q Consensus        68 ~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  147 (302)
                      ++.++.+||+|||++...... .......|++.|+|||++.   +..++.++|||||||++|+|++|+.||.+.......
T Consensus       153 i~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  228 (326)
T 1blx_A          153 VTSSGQIKLADFGLARIYSFQ-MALTSVVVTLWYRAPEVLL---QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL  228 (326)
T ss_dssp             ECTTCCEEECSCCSCCCCCGG-GGGCCCCCCCTTCCHHHHT---TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             EcCCCCEEEecCcccccccCC-CCccccccccceeCHHHHh---cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence            788999999999999876543 2334567899999999996   566899999999999999999999999988887777


Q ss_pred             HHHHhcCCCC----------------------CCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         148 FLMSKSGFKP----------------------PALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~~----------------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+......+                      +.......++..+.+||.+||..||.+|||+.++++
T Consensus       229 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          229 GKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             HHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            6665421111                      011123467899999999999999999999999999

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=1.2e-35  Score=265.50  Aligned_cols=173  Identities=20%  Similarity=0.238  Sum_probs=130.6

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+|+||+ +++|. .++...    .+++..++.++.||+.||+|||++||+||||||    ++.++.+||+|||+++..
T Consensus       109 ~~lv~e~~-~~~L~-~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~  182 (367)
T 2fst_X          109 VYLVTHLM-GADLN-NIVKCQ----KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT  182 (367)
T ss_dssp             CEEEEECC-CEECC------C----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred             EEEEeccc-CCCHH-HHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence            58999999 67999 777653    599999999999999999999999999999999    888999999999999775


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC-------
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP-------  158 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-------  158 (302)
                      ...   ....+||+.|+|||++.  ....++.++|||||||++|+|++|+.||.+.+....+..+......++       
T Consensus       183 ~~~---~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~  257 (367)
T 2fst_X          183 ADE---MTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI  257 (367)
T ss_dssp             -----------CCCTTCCHHHHT--TCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTC
T ss_pred             ccc---CCCcCcCcCccChHHHc--CCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence            432   34567999999999986  235689999999999999999999999999888777766654221110       


Q ss_pred             ----------------CC---CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         159 ----------------AL---KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       159 ----------------~~---~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                      ..   ......++.+.+||.+||..||.+|||+.++|+
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             CCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence                            00   011346889999999999999999999999999

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=2.9e-35  Score=255.21  Aligned_cols=186  Identities=15%  Similarity=0.171  Sum_probs=148.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. +++...+   ++++..+..++.|++.||+|||++||+||||||    ++.++
T Consensus        73 iv~~~~~~~~~~~~~lv~e~~~g~~L~-~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~  148 (294)
T 4eqm_A           73 IVSMIDVDEEDDCYYLVMEYIEGPTLS-EYIESHG---PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNK  148 (294)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHH-HHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             CceEEEeeeeCCeEEEEEeCCCCCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            466776665    58999999999999 8887776   799999999999999999999999999999999    88899


Q ss_pred             CEEEecccccccccccc-ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATI-NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      .+||+|||++....... ......+||+.|+|||++.   +..++.++|||||||++|+|++|+.||.+...........
T Consensus       149 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~  225 (294)
T 4eqm_A          149 TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK---GEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHI  225 (294)
T ss_dssp             CEEECCCSSSTTC-------------CCSSCCHHHHH---TCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHH
T ss_pred             CEEEEeCCCccccccccccccCccccCccccCHhHhc---CCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHh
Confidence            99999999998765432 2233457999999999995   6678899999999999999999999999888777666655


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-CHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-TADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-t~~~ll~  193 (302)
                      ..............++..+.++|.+||..||.+|| +++++.+
T Consensus       226 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~  268 (294)
T 4eqm_A          226 QDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKD  268 (294)
T ss_dssp             SSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHH
T ss_pred             hccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHH
Confidence            54433222233466899999999999999999999 5655555

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=1.2e-35  Score=255.77  Aligned_cols=184  Identities=23%  Similarity=0.306  Sum_probs=150.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++++|. +++....   .+++..+..++.||+.||.|||++||+||||+|    ++.++
T Consensus        70 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~  145 (283)
T 3bhy_A           70 IITLHDIFENKTDVVLILELVSGGELF-DFLAEKE---SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKN  145 (283)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS
T ss_pred             eeehhheecCCCeEEEEEeecCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCC
Confidence            466666655    58999999999999 7777666   799999999999999999999999999999999    54444


Q ss_pred             ----CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q psy3574          73 ----DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF  148 (302)
Q Consensus        73 ----~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  148 (302)
                          .+||+|||++...... .......|++.|+|||++.   ...++.++||||||+++|+|++|..||.+........
T Consensus       146 ~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~  221 (283)
T 3bhy_A          146 VPNPRIKLIDFGIAHKIEAG-NEFKNIFGTPEFVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT  221 (283)
T ss_dssp             SSSCCEEECCCTTCEECC---------CCCGGGCCHHHHT---TCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred             CCCCceEEEecccceeccCC-CcccccCCCcCccCcceec---CCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHH
Confidence                8999999999876543 2233457899999999985   5678999999999999999999999999888877776


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+.......+. .....++..+.+||.+||..||.+||++.++++
T Consensus       222 ~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          222 NISAVNYDFDE-EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             HHHTTCCCCCH-HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HhHhcccCCcc-hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence            66654433221 122457899999999999999999999999999

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=2.3e-35  Score=263.31  Aligned_cols=185  Identities=19%  Similarity=0.237  Sum_probs=148.7

Q ss_pred             Cchhhhcc---------hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----
Q psy3574           1 MSRVFNHF---------LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----   67 (302)
Q Consensus         1 iv~~~~~~---------~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----   67 (302)
                      ||++++.+         ..|+||||+.| +|. .++...    .+++..++.++.||+.||+|||++||+||||||    
T Consensus        87 iv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~-~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl  160 (364)
T 3qyz_A           87 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQ----HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL  160 (364)
T ss_dssp             BCCCCEEECCSSTTTCCCEEEEEECCSE-EHH-HHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred             CccceeEEecCCccccceEEEEEcccCc-CHH-HHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEE
Confidence            45666654         35899999986 998 777654    499999999999999999999999999999999    


Q ss_pred             CCCCCCEEEecccccccccccccc---ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH
Q psy3574          68 KDRCGDVKLADFGVSAQITATINK---RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM  144 (302)
Q Consensus        68 ~~~~~~ikL~DFg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  144 (302)
                      ++.++.+||+|||++.........   ....+||+.|+|||++.  ....++.++|||||||++|+|++|+.||.+....
T Consensus       161 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  238 (364)
T 3qyz_A          161 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL  238 (364)
T ss_dssp             ECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHH--TBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG
T ss_pred             ECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhc--CCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH
Confidence            888999999999999876543221   23457999999999875  3455899999999999999999999999888766


Q ss_pred             HHHHHHHhcCCCCCC--------------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         145 RALFLMSKSGFKPPA--------------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       145 ~~~~~i~~~~~~~~~--------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....+......++.                          ......++.++.+||.+||..||.+|||+.++++
T Consensus       239 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          239 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             GHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            666555432111110                          0012456899999999999999999999999999

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=2.4e-35  Score=256.46  Aligned_cols=181  Identities=38%  Similarity=0.640  Sum_probs=154.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||++|++|. +++..+    .+++..+..++.||+.||.|||++||+||||+|    ++.++
T Consensus        82 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~  156 (303)
T 3a7i_A           82 VTKYYGSYLKDTKLWIIMEYLGGGSAL-DLLEPG----PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG  156 (303)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTEEHH-HHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             EeEEEEEEecCCeEEEEEEeCCCCcHH-HHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCC
Confidence            466776654    58999999999999 777643    599999999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||++..............|++.|+|||++.   ...++.++|||||||++|+|++|..||...........+..
T Consensus       157 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  233 (303)
T 3a7i_A          157 EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIK---QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK  233 (303)
T ss_dssp             CEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHT---TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             CEEEeecccceecCccccccCccCCCcCccCHHHHh---cCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc
Confidence            999999999987765444445667999999999995   56688999999999999999999999998887776666655


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....    .....++..+.+||.+||..||.+|||+.++++
T Consensus       234 ~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  270 (303)
T 3a7i_A          234 NNPP----TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK  270 (303)
T ss_dssp             SCCC----CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCCC----CCccccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            4322    123567999999999999999999999999999

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.1e-35  Score=261.30  Aligned_cols=174  Identities=18%  Similarity=0.200  Sum_probs=135.6

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+|||||+||+|. +++.........++..+..++.||+.||+|||++||+||||||    ++.++.+||+|||+++..
T Consensus       136 ~~lv~e~~~~~~L~-~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~  214 (332)
T 3qd2_B          136 LYIQMQLCRKENLK-DWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM  214 (332)
T ss_dssp             EEEEEECCCSSCHH-HHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEEecCCCCHH-HHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCccccc
Confidence            68999999999999 8888766333444456899999999999999999999999999    888899999999999876


Q ss_pred             cccc------------ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q psy3574          86 TATI------------NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS  153 (302)
Q Consensus        86 ~~~~------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  153 (302)
                      ....            ......+||+.|+|||++.   +..++.++|||||||++|+|++|..|+..  .......+...
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~  289 (332)
T 3qd2_B          215 DQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIH---GNNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNL  289 (332)
T ss_dssp             SCC--------------CCCSCC-CGGGSCHHHHH---CCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTT
T ss_pred             ccchhhccccccccccccccccCCCcCccChHHhc---CCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhcc
Confidence            5532            1223457999999999995   66789999999999999999998776421  11122222221


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         154 GFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       154 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .  .+  ......++.+.+||.+||..||.+|||+.++++
T Consensus       290 ~--~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          290 K--FP--LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             C--CC--HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             C--CC--cccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            1  11  112335678899999999999999999999999

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=2.6e-35  Score=255.80  Aligned_cols=190  Identities=32%  Similarity=0.484  Sum_probs=146.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc-----ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI-----TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----   67 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~-----~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----   67 (302)
                      ||++++.+.    .|+||||++||+|. +++....     ....+++..+..++.||+.||.|||++||+||||+|    
T Consensus        75 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil  153 (303)
T 2vwi_A           75 IVSYYTSFVVKDELWLVMKLLSGGSVL-DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNIL  153 (303)
T ss_dssp             BCCEEEEEESSSCEEEEEECCTTCBHH-HHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEE
T ss_pred             EeeEEEEEeecCCcEEEehhccCCchH-HHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEE
Confidence            567777665    58999999999999 7776410     012589999999999999999999999999999999    


Q ss_pred             CCCCCCEEEecccccccccccc-----ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q psy3574          68 KDRCGDVKLADFGVSAQITATI-----NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH  142 (302)
Q Consensus        68 ~~~~~~ikL~DFg~a~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  142 (302)
                      ++.++.+||+|||++.......     .......|++.|+|||++..  ...++.++|||||||++|+|++|..||....
T Consensus       154 ~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  231 (303)
T 2vwi_A          154 LGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQ--VRGYDFKADIWSFGITAIELATGAAPYHKYP  231 (303)
T ss_dssp             ECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHH--HHCCCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             EcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhcc--ccCCCchhhHHHHHHHHHHHHhCCCCCccCc
Confidence            8888999999999987654321     11234578999999999852  2458899999999999999999999998877


Q ss_pred             hHHHHHHHHhcCCCCCC-----CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         143 PMRALFLMSKSGFKPPA-----LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       143 ~~~~~~~i~~~~~~~~~-----~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .................     ......++..+.++|.+||..||.+||++.++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          232 PMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             GGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            66555444443221111     1123567899999999999999999999999999

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=2.3e-35  Score=253.43  Aligned_cols=185  Identities=24%  Similarity=0.368  Sum_probs=151.5

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhcc-ccccccccchhHHHhhHHHHHHHHHhCC-----CCCCCCcC-
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGI-TAIELAELQPPMFDLHPMRALFLMSKSG-----FKPPALKD-   67 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~-----i~Hrdlkp-   67 (302)
                      ||++++.+.      .|+||||++||+|. +++.... .+..+++..++.++.|++.||.|||++|     |+||||+| 
T Consensus        67 i~~~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~  145 (279)
T 2w5a_A           67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLA-SVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA  145 (279)
T ss_dssp             BCCEEEEEEEGGGTEEEEEEECCTTEEHH-HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGG
T ss_pred             CCeEEEEEecCCCceEEEEEeCCCCCCHH-HHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchh
Confidence            567777552      58999999999999 6665533 1224999999999999999999999999     99999999 


Q ss_pred             ---CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH
Q psy3574          68 ---KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM  144 (302)
Q Consensus        68 ---~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  144 (302)
                         ++.++.+||+|||++..............|++.|+|||++.   +..++.++|||||||++|+|++|..||......
T Consensus       146 NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~  222 (279)
T 2w5a_A          146 NVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMN---RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK  222 (279)
T ss_dssp             GEEECSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHH---CC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             hEEEcCCCCEEEecCchheeeccccccccccCCCccccChHHhc---cCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH
Confidence               88889999999999987654333333457899999999985   566899999999999999999999999988877


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         145 RALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       145 ~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....+.......    .+..++..+.++|.+||..||.+||++.++++
T Consensus       223 ~~~~~i~~~~~~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  267 (279)
T 2w5a_A          223 ELAGKIREGKFRR----IPYRYSDELNEIITRMLNLKDYHRPSVEEILE  267 (279)
T ss_dssp             HHHHHHHHTCCCC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhhccccc----CCcccCHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            7776666654321    23567999999999999999999999999999

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=3.3e-35  Score=258.92  Aligned_cols=183  Identities=19%  Similarity=0.242  Sum_probs=143.5

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC---
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR---   70 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~---   70 (302)
                      +++++.+.    .|+||||+ +++|. +++.... ..++++..++.++.||+.||+|||++||+||||||    ++.   
T Consensus        80 ~~~~~~~~~~~~~~lv~e~~-~~~l~-~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~  156 (339)
T 1z57_A           80 VQMLEWFEHHGHICIVFELL-GLSTY-DFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDY  156 (339)
T ss_dssp             CCEEEEEEETTEEEEEEECC-CCBHH-HHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCE
T ss_pred             EeeecccccCCcEEEEEcCC-CCCHH-HHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEecccc
Confidence            45555544    58999999 77999 6665543 13588999999999999999999999999999999    444   


Q ss_pred             ----------------CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhC
Q psy3574          71 ----------------CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAEL  134 (302)
Q Consensus        71 ----------------~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g  134 (302)
                                      ++.+||+|||++.....   ......||+.|+|||++.   +..++.++|||||||++|+|++|
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~il~el~~g  230 (339)
T 1z57_A          157 TEAYNPKIKRDERTLINPDIKVVDFGSATYDDE---HHSTLVSTRHYRAPEVIL---ALGWSQPCDVWSIGCILIEYYLG  230 (339)
T ss_dssp             EEEEC----CEEEEESCCCEEECCCSSCEETTS---CCCSSCSCGGGCCHHHHT---TSCCCTHHHHHHHHHHHHHHHHS
T ss_pred             ccccCCccccccccccCCCceEeeCcccccCcc---ccccccCCccccChHHhh---CCCCCcchhhHHHHHHHHHHHhC
Confidence                            67899999999976543   234567999999999996   66789999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHhcCCCCCC---------------------------------------CCCCCCCCHHHHHHHH
Q psy3574         135 QPPMFDLHPMRALFLMSKSGFKPPA---------------------------------------LKDKDRWSSTFHNFVK  175 (302)
Q Consensus       135 ~~pf~~~~~~~~~~~i~~~~~~~~~---------------------------------------~~~~~~~s~~~~~li~  175 (302)
                      ..||...+.......+.......+.                                       .......+..+.+||.
T Consensus       231 ~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  310 (339)
T 1z57_A          231 FTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQ  310 (339)
T ss_dssp             SCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHH
T ss_pred             CCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHH
Confidence            9999988776655544332111110                                       0011223577899999


Q ss_pred             HhhhcCCCCCCCHHHHHH
Q psy3574         176 IALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       176 ~~L~~dp~~R~t~~~ll~  193 (302)
                      +||..||.+|||+.++++
T Consensus       311 ~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          311 KMLEYDPAKRITLREALK  328 (339)
T ss_dssp             HHTCSSTTTSCCHHHHTT
T ss_pred             HHhCcCcccccCHHHHhc
Confidence            999999999999999999

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=2.1e-35  Score=255.02  Aligned_cols=187  Identities=25%  Similarity=0.344  Sum_probs=137.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhC-CCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKS-GFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp----~~~   70 (302)
                      ||++++.+.    .|+||||++| +|. +++.. ...+..+++..++.++.||+.||+|||++ ||+||||||    ++.
T Consensus        68 iv~~~~~~~~~~~~~lv~e~~~~-~l~-~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~  145 (290)
T 3fme_A           68 TVTFYGALFREGDVWICMELMDT-SLD-KFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA  145 (290)
T ss_dssp             BCCEEEEEECSSSEEEEEECCSE-EHH-HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECT
T ss_pred             EEEEeeeeeccCCEEEEEehhcc-chH-HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC
Confidence            466777664    5899999986 877 44433 11123799999999999999999999998 999999999    888


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhccccc-ccCCCCchhhHHHHHHHHHHHHhCCCCCCC-CChHHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE-RKGGYNQQCDIWAVGITAIELAELQPPMFD-LHPMRALF  148 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~-~~~~~~~~  148 (302)
                      ++.+||+|||++...... .......||+.|+|||++... ....++.++||||+||++|+|++|..||.. ........
T Consensus       146 ~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  224 (290)
T 3fme_A          146 LGQVKMCDFGISGYLVDD-VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK  224 (290)
T ss_dssp             TCCEEBCCC----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH
T ss_pred             CCCEEEeecCCccccccc-ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHH
Confidence            899999999999876553 223344789999999997321 255688999999999999999999999976 34444444


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..........   ....++..+.+||.+||..||.+|||+.++++
T Consensus       225 ~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          225 QVVEEPSPQL---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HHHHSCCCCC---CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHhccCCCCc---ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            4444332211   13567999999999999999999999999999

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=1.9e-35  Score=253.53  Aligned_cols=183  Identities=18%  Similarity=0.210  Sum_probs=147.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++|+|. +++....   .+++..+..++.|++.||.|||++||+||||+|    ++.++
T Consensus        67 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~  142 (276)
T 2yex_A           67 VVKFYGHRREGNIQYLFLEYCSGGELF-DRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD  142 (276)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTEEGG-GGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             ceeeeeEEEcCCEEEEEEEecCCCcHH-HHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCC
Confidence            466777655    48999999999999 7776555   799999999999999999999999999999999    88889


Q ss_pred             CEEEecccccccccccc--ccccccccCcccchhhcccccccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HH
Q psy3574          73 DVKLADFGVSAQITATI--NKRKSFIGTPYWMAPEVAAVERKGG-YNQQCDIWAVGITAIELAELQPPMFDLHPMRA-LF  148 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~  148 (302)
                      .+||+|||.+.......  .......|++.|+|||++.   ... ++.++|||||||++|+|++|..||........ ..
T Consensus       143 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  219 (276)
T 2yex_A          143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS  219 (276)
T ss_dssp             CEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGT---CSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHH
T ss_pred             CEEEeeCCCccccCCCcchhcccCCccccCccChHHHh---cCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHH
Confidence            99999999997654321  2234567899999999985   333 46789999999999999999999977554322 22


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+.....   .......++..+.+||.+||..||.+|||+.++++
T Consensus       220 ~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          220 DWKEKKT---YLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             HHHTTCT---TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             Hhhhccc---ccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            2222211   11223567999999999999999999999999999

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=7e-35  Score=260.80  Aligned_cols=188  Identities=16%  Similarity=0.179  Sum_probs=153.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-------------cccccccchhHHHhhHHHHHHHHHhCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-------------AIELAELQPPMFDLHPMRALFLMSKSGFKPP   63 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hr   63 (302)
                      ||++++.+.    +|+||||++||+|. +++.....             ...+++..+..++.||+.||.|||++||+||
T Consensus       149 Iv~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr  227 (370)
T 2psq_A          149 IINLLGACTQDGPLYVIVEYASKGNLR-EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR  227 (370)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHH-HHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             EeeEEEEEccCCCEEEEEEcCCCCCHH-HHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence            577777765    58999999999999 77765431             1247888899999999999999999999999


Q ss_pred             CCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCC
Q psy3574          64 ALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQP  136 (302)
Q Consensus        64 dlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~  136 (302)
                      ||||    ++.++.+||+|||+++.......  ......+++.|+|||++.   +..|+.++|||||||++|+|++ |..
T Consensus       228 Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~DvwslG~il~ellt~g~~  304 (370)
T 2psq_A          228 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF---DRVYTHQSDVWSFGVLMWEIFTLGGS  304 (370)
T ss_dssp             CCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHH---TCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhc---CCCCCcHHHHHHHHHHHHHHHcCCCC
Confidence            9999    88899999999999986654322  123345778999999995   6679999999999999999999 999


Q ss_pred             CCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         137 PMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       137 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ||.+.........+......    ..+..++..+.++|.+||..||.+||++.++++.+-
T Consensus       305 p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~  360 (370)
T 2psq_A          305 PYPGIPVEELFKLLKEGHRM----DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD  360 (370)
T ss_dssp             SSTTCCGGGHHHHHHTTCCC----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHhcCCCC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            99888777666655544321    224568999999999999999999999999998554

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=4.4e-35  Score=260.78  Aligned_cols=189  Identities=16%  Similarity=0.188  Sum_probs=147.0

Q ss_pred             Cchhhhcch-----------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHH--hCCCCCCCCcC
Q psy3574           1 MSRVFNHFL-----------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS--KSGFKPPALKD   67 (302)
Q Consensus         1 iv~~~~~~~-----------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH--~~~i~Hrdlkp   67 (302)
                      ||++++.|.           .|+||||+.+ +|...+.........+++..++.++.|++.||.|||  ++||+||||||
T Consensus        81 iv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp  159 (360)
T 3e3p_A           81 IVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKP  159 (360)
T ss_dssp             BCCEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCG
T ss_pred             cccHHHhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCH
Confidence            466666653           6899999998 444244332222237889999999999999999999  99999999999


Q ss_pred             ----CCC-CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q psy3574          68 ----KDR-CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH  142 (302)
Q Consensus        68 ----~~~-~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  142 (302)
                          ++. ++.+||+|||+++..... .......||+.|+|||++.  ....++.++|||||||++|+|++|+.||.+.+
T Consensus       160 ~NIll~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~--~~~~~~~~~Di~slG~il~ell~g~~pf~~~~  236 (360)
T 3e3p_A          160 HNVLVNEADGTLKLCDFGSAKKLSPS-EPNVAYICSRYYRAPELIF--GNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN  236 (360)
T ss_dssp             GGEEEETTTTEEEECCCTTCBCCCTT-SCCCSTTSCGGGCCHHHHT--TCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHEEEeCCCCcEEEeeCCCceecCCC-CCcccccCCcceeCHHHHc--CCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence                554 899999999999876654 2334567899999999985  23448999999999999999999999999988


Q ss_pred             hHHHHHHHHhcCCCCCC---------------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         143 PMRALFLMSKSGFKPPA---------------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       143 ~~~~~~~i~~~~~~~~~---------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .......+......++.                           .......+.++.+||.+||+.||.+|||+.++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          237 SAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             HHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             hHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence            87777666542111110                           0011225788999999999999999999999999

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=3.9e-35  Score=261.46  Aligned_cols=186  Identities=16%  Similarity=0.227  Sum_probs=140.7

Q ss_pred             Cchhhhcc---------hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----
Q psy3574           1 MSRVFNHF---------LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----   67 (302)
Q Consensus         1 iv~~~~~~---------~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----   67 (302)
                      ||++++.+         .+|+||||+.| +|. +.+....  ..+++..++.++.||+.||.|||++||+||||||    
T Consensus        91 iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl  166 (362)
T 3pg1_A           91 ILGLRDIFVHFEEPAMHKLYLVTELMRT-DLA-QVIHDQR--IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNIL  166 (362)
T ss_dssp             BCCCSEEEEECCTTTCCEEEEEEECCSE-EHH-HHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred             ccceeeeEEeccCCCcceEEEEEccCCC-CHH-HHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEE
Confidence            56777766         35899999985 887 4444332  2699999999999999999999999999999999    


Q ss_pred             CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy3574          68 KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRAL  147 (302)
Q Consensus        68 ~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  147 (302)
                      ++.++.+||+|||++...... .......||+.|+|||++.  ....++.++|||||||++|+|++|+.||.+.......
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~  243 (362)
T 3pg1_A          167 LADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVM--QFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL  243 (362)
T ss_dssp             ECTTCCEEECCTTC----------------CGGGCCHHHHT--TCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             EcCCCCEEEEecCcccccccc-cccceecccceecCcHHhc--CCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            888999999999999765443 2334457899999999986  2356899999999999999999999999988877766


Q ss_pred             HHHHhcCCCCC------------------------C---CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         148 FLMSKSGFKPP------------------------A---LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~~~------------------------~---~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+......+.                        .   ......+++.+.+||.+||..||.+|||+.++++
T Consensus       244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             HHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence            66544211111                        0   0112356889999999999999999999999999

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=2.8e-35  Score=254.77  Aligned_cols=188  Identities=23%  Similarity=0.387  Sum_probs=145.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC-C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR-C   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~-~   71 (302)
                      ||++++.+.    .|+||||+++++|. +++........+++..++.++.||+.||.|||++||+||||+|    ++. +
T Consensus        81 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~  159 (295)
T 2clq_A           81 IVQYLGSFSENGFIKIFMEQVPGGSLS-ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYS  159 (295)
T ss_dssp             BCCEEEEEEETTEEEEEEECCSEEEHH-HHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT
T ss_pred             EeeEeeEEEeCCcEEEEEEeCCCCCHH-HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCC
Confidence            467777665    48999999999999 7776653233567888999999999999999999999999999    554 8


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR-ALFLM  150 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i  150 (302)
                      +.+||+|||++..............|++.|+|||++.+. ...++.++|||||||++|+|++|..||....... .....
T Consensus       160 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  238 (295)
T 2clq_A          160 GVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG-PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV  238 (295)
T ss_dssp             CCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHG-GGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH
T ss_pred             CCEEEeecccccccCCCCCcccccCCCccccChhhhcCC-CCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh
Confidence            999999999998765543334456799999999998521 1347899999999999999999999997643332 22222


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ......+   ..+..++..+.++|.+||..||++||++.++++
T Consensus       239 ~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          239 GMFKVHP---EIPESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HHHCCCC---CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             ccccccc---cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            2222111   124568999999999999999999999999999

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=3.2e-35  Score=264.09  Aligned_cols=183  Identities=20%  Similarity=0.254  Sum_probs=143.9

Q ss_pred             chhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHH--hCCCCCCCCcC----C--C
Q psy3574           2 SRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS--KSGFKPPALKD----K--D   69 (302)
Q Consensus         2 v~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH--~~~i~Hrdlkp----~--~   69 (302)
                      |++++.+.    .|+||||+.+ +|. +++.... ...+++..++.++.||+.||.|||  +.||+||||||    +  +
T Consensus       119 v~~~~~~~~~~~~~lv~e~~~~-~L~-~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~  195 (382)
T 2vx3_A          119 VHLKRHFMFRNHLCLVFEMLSY-NLY-DLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNP  195 (382)
T ss_dssp             CCEEEEEEETTEEEEEEECCCC-BHH-HHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESST
T ss_pred             EEeeeeeccCCceEEEEecCCC-CHH-HHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecC
Confidence            45555544    5899999976 999 6665542 125899999999999999999999  57999999999    4  5


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      ..+.+||+|||+++....   .....+||+.|+|||++.   +..++.++|||||||++|+|++|+.||.+.+....+..
T Consensus       196 ~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~  269 (382)
T 2vx3_A          196 KRSAIKIVDFGSSCQLGQ---RIYQYIQSRFYRSPEVLL---GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNK  269 (382)
T ss_dssp             TSCCEEECCCTTCEETTC---CCCSSCSCGGGCCHHHHT---TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCcEEEEeccCceeccc---ccccccCCccccChHHHc---CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            578899999999987653   234567999999999996   66789999999999999999999999999888877776


Q ss_pred             HHhcCCCCCCC--------------------------------CCC--CC-------------------------CCHHH
Q psy3574         150 MSKSGFKPPAL--------------------------------KDK--DR-------------------------WSSTF  170 (302)
Q Consensus       150 i~~~~~~~~~~--------------------------------~~~--~~-------------------------~s~~~  170 (302)
                      +......++..                                ..+  ..                         .+..+
T Consensus       270 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (382)
T 2vx3_A          270 IVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKF  349 (382)
T ss_dssp             HHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHH
T ss_pred             HHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHH
Confidence            65532111100                                000  00                         01378


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         171 HNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       171 ~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+||.+||+.||++|||+.++|+
T Consensus       350 ~dli~~mL~~dP~~Rpta~e~L~  372 (382)
T 2vx3_A          350 KDLILRMLDYDPKTRIQPYYALQ  372 (382)
T ss_dssp             HHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHhcCCChhhCCCHHHHhc
Confidence            99999999999999999999999

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=2.2e-34  Score=249.71  Aligned_cols=191  Identities=21%  Similarity=0.289  Sum_probs=142.9

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||++||+|. +++....  ..+++..++.++.||+.||+|||++||+||||||    ++.++.+||+|||++...
T Consensus        90 ~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~  166 (303)
T 1zy4_A           90 LFIQMEYCENGTLY-DLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV  166 (303)
T ss_dssp             EEEEEECCCSCBHH-HHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCT
T ss_pred             eEEEEecCCCCCHH-Hhhhccc--cccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhc
Confidence            58999999999999 7776543  2688899999999999999999999999999999    888999999999999765


Q ss_pred             cccc--------------ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHH
Q psy3574          86 TATI--------------NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL-HPMRALFLM  150 (302)
Q Consensus        86 ~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-~~~~~~~~i  150 (302)
                      ....              .......|++.|+|||++.  ....++.++|||||||++|+|++   ||... ........+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~  241 (303)
T 1zy4_A          167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD--GTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKL  241 (303)
T ss_dssp             TC-------------------------CTTSCHHHHT--SCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHH
T ss_pred             ccccchhccccccccccccccccCCCcccccCccccc--CCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhc
Confidence            4321              1223456899999999985  23358899999999999999998   55432 223333333


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKR  230 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~  230 (302)
                      .......+. ......+..+.++|.+||..||.+|||+.++++                          ||||.......
T Consensus       242 ~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~--------------------------h~~~~~~~~~~  294 (303)
T 1zy4_A          242 RSVSIEFPP-DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN--------------------------SGWLPVKHQDE  294 (303)
T ss_dssp             HSTTCCCCT-TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH--------------------------SSCSCCCCHHH
T ss_pred             cccccccCc-cccccchHHHHHHHHHHHhcCcccCcCHHHHhC--------------------------CCCcCCCChHH
Confidence            333222221 233556788999999999999999999999999                          99998766554


Q ss_pred             HHHHH
Q psy3574         231 VAIEL  235 (302)
Q Consensus       231 ~~~~~  235 (302)
                      ...+.
T Consensus       295 ~~~~~  299 (303)
T 1zy4_A          295 VIKEA  299 (303)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44433

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=6.5e-35  Score=251.93  Aligned_cols=183  Identities=24%  Similarity=0.350  Sum_probs=151.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC---
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD---   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~---   69 (302)
                      |+++++.+.    .|+||||+++++|. +.+....   .+++..++.++.||+.||.|||++|++||||+|    ++   
T Consensus        83 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~  158 (287)
T 2wei_A           83 IMKLFEILEDSSSFYIVGELYTGGELF-DEIIKRK---RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE  158 (287)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS
T ss_pred             ccEEEEEEeCCCeEEEEEEccCCCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCC
Confidence            456666554    58999999999999 6666555   699999999999999999999999999999999    33   


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      ..+.+||+|||++...... .......|++.|+|||++.    ..++.++||||||+++|+|++|..||.+.+.......
T Consensus       159 ~~~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~----~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~  233 (287)
T 2wei_A          159 KDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVLR----GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR  233 (287)
T ss_dssp             TTCCEEECSTTGGGTBCCC-SSCSCHHHHHTTCCHHHHT----TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CcccEEEeccCcceeecCC-CccccccCcccccChHHhc----CCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            3457999999998766543 2233446899999999984    3488999999999999999999999999888877777


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+ ......++..+.++|.+||..||.+|||+.++++
T Consensus       234 ~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          234 VETGKYAFD-LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             HHHCCCCCC-SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHcCCCCCC-chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            766554332 2223567999999999999999999999999999

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.6e-35  Score=261.70  Aligned_cols=185  Identities=17%  Similarity=0.262  Sum_probs=123.8

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~   68 (302)
                      |+++++.+.        .|+||||++||+|. +++.... ...+++.+++.++.||+.||.|||++||+||||||    +
T Consensus        84 i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~-~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll  161 (336)
T 3fhr_A           84 IVCILDVYENMHHGKRCLLIIMECMEGGELF-SRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLY  161 (336)
T ss_dssp             BCCEEEEEEEEETTEEEEEEEEECCTTEEHH-HHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             hHHHHHHHhhccCCCceEEEEEeccCCCCHH-HHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence            355666553        58999999999999 7776543 23699999999999999999999999999999999    4


Q ss_pred             C---CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          69 D---RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        69 ~---~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                      +   ..+.+||+|||++......  .....+||+.|+|||++.   ...++.++|||||||++|+|++|..||.......
T Consensus       162 ~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~t~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  236 (336)
T 3fhr_A          162 TSKEKDAVLKLTDFGFAKETTQN--ALQTPCYTPYYVAPEVLG---PEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQA  236 (336)
T ss_dssp             SCSSTTCCEEECCCTTCEEC---------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred             EecCCCceEEEeccccceecccc--ccccCCCCcCccChhhhC---CCCCCchhhHHHHHHHHHHHHHCCCCCCCccchh
Confidence            3   3567999999999766542  233557899999999985   5568899999999999999999999997655443


Q ss_pred             HH----HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 AL----FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~----~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..    ..+.......+ ......++..+.+||.+||..||.+|||+.++++
T Consensus       237 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          237 ISPGMKRRIRLGQYGFP-NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             --------------CCC-TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hhhhHHHhhhccccccC-chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            21    11111111111 1223568999999999999999999999999999

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=5.8e-35  Score=251.54  Aligned_cols=179  Identities=18%  Similarity=0.204  Sum_probs=142.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc-ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC--
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI-TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD--   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~--   69 (302)
                      ||++++.+.    .|+||||++||+|. +++.... ....+++..++.++.||+.||+|||++||+||||||    ++  
T Consensus        73 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~  151 (289)
T 1x8b_A           73 VVRYFSAWAEDDHMLIQNEYCNGGSLA-DAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRT  151 (289)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTCBHH-HHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--
T ss_pred             eeeeeeeeecCCeEEEEEEecCCCcHH-HHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCC
Confidence            567777665    58999999999999 7776542 112689999999999999999999999999999999    44  


Q ss_pred             -----------------CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHH
Q psy3574          70 -----------------RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELA  132 (302)
Q Consensus        70 -----------------~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell  132 (302)
                                       ..+.+||+|||.+......    ....||+.|+|||++.  ....++.++|||||||++|+|+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE~~~--~~~~~~~~~Di~slG~il~~l~  225 (289)
T 1x8b_A          152 SIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP----QVEEGDSRFLANEVLQ--ENYTHLPKADIFALALTVVCAA  225 (289)
T ss_dssp             ------------------CCCEEECCCTTCEETTCS----CCCCCCGGGCCHHHHT--TCCTTHHHHHHHHHHHHHHHHT
T ss_pred             CCCcccccccccccccCCceEEEEcccccccccCCc----cccCCCccccChhHhc--CCCCCCchhhHHHHHHHHHHHh
Confidence                             4558999999999876543    2346899999999986  2235668999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         133 ELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       133 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +|.+++......   ..+......    ..+..++..+.++|.+||..||.+|||+.++++
T Consensus       226 ~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          226 GAEPLPRNGDQW---HEIRQGRLP----RIPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             TCCCCCSSSHHH---HHHHTTCCC----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cCCCCCcchhHH---HHHHcCCCC----CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            999887654332   233332221    224568999999999999999999999999999

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.4e-34  Score=258.67  Aligned_cols=190  Identities=17%  Similarity=0.202  Sum_probs=154.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc----cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT----AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~   68 (302)
                      ||++++.+.    .|+||||++||+|. +++.....    ...+++..+..++.||+.||+|||++||+||||||    +
T Consensus       136 Iv~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll  214 (367)
T 3l9p_A          136 IVRCIGVSLQSLPRFILLELMAGGDLK-SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL  214 (367)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTEEHH-HHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             CCeEEEEEecCCCCEEEEEeCCCCCHH-HHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEE
Confidence            567777765    48999999999999 77765421    12488889999999999999999999999999999    5


Q ss_pred             C---CCCCEEEecccccccccccc--ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q psy3574          69 D---RCGDVKLADFGVSAQITATI--NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLH  142 (302)
Q Consensus        69 ~---~~~~ikL~DFg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~  142 (302)
                      +   .+..+||+|||+++......  .......||+.|+|||++.   +..++.++|||||||++|+|++ |..||.+..
T Consensus       215 ~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~DvwslG~il~ellt~g~~pf~~~~  291 (367)
T 3l9p_A          215 TCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS  291 (367)
T ss_dssp             SCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             ecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhc---CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            5   34469999999997654322  2223456789999999996   6678999999999999999998 999999988


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q psy3574         143 PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIH  198 (302)
Q Consensus       143 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~  198 (302)
                      .......+........    +..++..+.+||.+||+.||.+||++.+++++++..
T Consensus       292 ~~~~~~~i~~~~~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          292 NQEVLEFVTSGGRMDP----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             HHHHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCC----CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            8887777766543222    356789999999999999999999999999966543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=3.4e-35  Score=264.54  Aligned_cols=184  Identities=21%  Similarity=0.168  Sum_probs=139.2

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC-CCCCCCCcC----
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS-GFKPPALKD----   67 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp----   67 (302)
                      ||++++.|.        +|+||||+.+ +|.+.+.....  ..+++..++.++.||+.||+|||++ ||+||||||    
T Consensus       103 iv~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIl  179 (397)
T 1wak_A          103 VVQLLDDFKISGVNGTHICMVFEVLGH-HLLKWIIKSNY--QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENIL  179 (397)
T ss_dssp             BCCEEEEEEEEETTEEEEEEEECCCCC-BHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEE
T ss_pred             eeeeecceeecCCCCceEEEEEeccCc-cHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHee
Confidence            466676654        6899999955 66635555432  2699999999999999999999998 999999999    


Q ss_pred             CCCCC-------------------------------------------------CEEEeccccccccccccccccccccC
Q psy3574          68 KDRCG-------------------------------------------------DVKLADFGVSAQITATINKRKSFIGT   98 (302)
Q Consensus        68 ~~~~~-------------------------------------------------~ikL~DFg~a~~~~~~~~~~~~~~gt   98 (302)
                      ++.++                                                 .+||+|||++......   ....+||
T Consensus       180 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt  256 (397)
T 1wak_A          180 LSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQT  256 (397)
T ss_dssp             ECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSC
T ss_pred             EeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCC
Confidence            55443                                                 8999999999876532   3345799


Q ss_pred             cccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHhcCCCCCC-------------
Q psy3574          99 PYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH------PMRALFLMSKSGFKPPA-------------  159 (302)
Q Consensus        99 ~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~~~-------------  159 (302)
                      +.|+|||++.   +..++.++|||||||++|+|++|..||....      .......+......++.             
T Consensus       257 ~~y~aPE~~~---~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  333 (397)
T 1wak_A          257 RQYRSLEVLI---GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFF  333 (397)
T ss_dssp             GGGCCHHHHH---TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTB
T ss_pred             CcccCChhhc---CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhccccccccc
Confidence            9999999996   6668999999999999999999999997544      22222222221111100             


Q ss_pred             ------------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         160 ------------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       160 ------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                              ...+...+..+.+||.+||..||.+|||+.++|+
T Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          334 TKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             CTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             CCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                                    0011223567899999999999999999999999

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=7.6e-35  Score=258.30  Aligned_cols=175  Identities=18%  Similarity=0.210  Sum_probs=138.0

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C-----------------
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K-----------------   68 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~-----------------   68 (302)
                      .|+||||+.+ +|.+.+.....  ..+++..++.++.||+.||+|||++||+||||||    +                 
T Consensus        97 ~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~  173 (355)
T 2eu9_A           97 MCIAFELLGK-NTFEFLKENNF--QPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEE  173 (355)
T ss_dssp             EEEEEECCCC-BHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred             EEEEEeccCC-ChHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccc
Confidence            5899999955 66635544432  2689999999999999999999999999999999    4                 


Q ss_pred             --CCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH
Q psy3574          69 --DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRA  146 (302)
Q Consensus        69 --~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  146 (302)
                        +..+.+||+|||+++....   ......||+.|+|||++.   +..++.++|||||||++|+|++|..||........
T Consensus       174 ~~~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  247 (355)
T 2eu9_A          174 KSVKNTSIRVADFGSATFDHE---HHTTIVATRHYRPPEVIL---ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH  247 (355)
T ss_dssp             EEESCCCEEECCCTTCEETTS---CCCSSCSCGGGCCHHHHT---TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             cccCCCcEEEeecCccccccc---cccCCcCCCcccCCeeee---cCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence              4678999999999976443   234557999999999996   66789999999999999999999999998877665


Q ss_pred             HHHHHhcCCCCCC---------------------------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCC
Q psy3574         147 LFLMSKSGFKPPA---------------------------------------LKDKDRWSSTFHNFVKIALTKNPKKRPT  187 (302)
Q Consensus       147 ~~~i~~~~~~~~~---------------------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t  187 (302)
                      ...+.......|.                                       .......+..+.+||.+||..||.+|||
T Consensus       248 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt  327 (355)
T 2eu9_A          248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT  327 (355)
T ss_dssp             HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcC
Confidence            5544332211110                                       0001122457899999999999999999


Q ss_pred             HHHHHH
Q psy3574         188 ADKLLQ  193 (302)
Q Consensus       188 ~~~ll~  193 (302)
                      +.++++
T Consensus       328 ~~e~l~  333 (355)
T 2eu9_A          328 LAEALL  333 (355)
T ss_dssp             HHHHTT
T ss_pred             HHHHhc
Confidence            999999

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.1e-34  Score=258.13  Aligned_cols=189  Identities=16%  Similarity=0.162  Sum_probs=151.7

Q ss_pred             Cchhhhcch-----heeEEEecCCcchHHHHHHhccc-------------------------------------------
Q psy3574           1 MSRVFNHFL-----QVAAVERKGGYNQQCDIWAVGIT-------------------------------------------   32 (302)
Q Consensus         1 iv~~~~~~~-----~~iv~E~~~~g~L~~~~~~~~~~-------------------------------------------   32 (302)
                      ||++++.+.     .|+|||||+||+|. +++.....                                           
T Consensus        88 iv~~~~~~~~~~~~~~iv~e~~~~g~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (359)
T 3vhe_A           88 VVNLLGACTKPGGPLMVIVEFCKFGNLS-TYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSG  166 (359)
T ss_dssp             BCCEEEEECSTTSCCEEEEECCTTEEHH-HHHHTTTTSBCSCC-------------------------------------
T ss_pred             eeeeeeeeecCCCceEEEEEecCCCcHH-HHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccc
Confidence            577777654     58999999999999 77766431                                           


Q ss_pred             --------------------cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccccccc
Q psy3574          33 --------------------AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQITAT   88 (302)
Q Consensus        33 --------------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~   88 (302)
                                          +..+++..++.++.||+.||+|||++||+||||||    ++.++.+||+|||+++.....
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~  246 (359)
T 3vhe_A          167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD  246 (359)
T ss_dssp             -----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred             cccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence                                11288899999999999999999999999999999    788899999999999866432


Q ss_pred             cc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCC
Q psy3574          89 IN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKDKDR  165 (302)
Q Consensus        89 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  165 (302)
                      ..  ......||+.|+|||++.   +..++.++|||||||++|+|++ |..||.+..................   .+..
T Consensus       247 ~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~  320 (359)
T 3vhe_A          247 PDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR---APDY  320 (359)
T ss_dssp             TTCEEC--CEECGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCC---CCTT
T ss_pred             ccchhccccCCCceeEChhhhc---CCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCC---CCCC
Confidence            21  233456889999999996   6678999999999999999998 9999987765444444444332222   2456


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         166 WSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       166 ~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      +++++.++|.+||..||.+|||+.++++++-
T Consensus       321 ~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  351 (359)
T 3vhe_A          321 TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG  351 (359)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence            7999999999999999999999999999664

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=6.6e-35  Score=258.46  Aligned_cols=198  Identities=19%  Similarity=0.200  Sum_probs=158.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHH------HHhccccccccccchhHHHhhHHHHHHHHHh-CCCCCCCCcC--
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDI------WAVGITAIELAELQPPMFDLHPMRALFLMSK-SGFKPPALKD--   67 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~------~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~i~Hrdlkp--   67 (302)
                      ||++++.+.    .|+||||+++|+|. ++      +.... ...+++..++.++.||+.||.|||+ +||+||||+|  
T Consensus       105 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~N  182 (348)
T 2pml_X          105 CLTCEGIITNYDEVYIIYEYMENDSIL-KFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSN  182 (348)
T ss_dssp             BCCCSEEEESSSEEEEEEECCTTCBSS-EESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGG
T ss_pred             cceEEEEEeeCCeEEEEEeccCCCcHH-HHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHh
Confidence            466777655    58999999999999 66      44411 1279999999999999999999999 9999999999  


Q ss_pred             --CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccC-CCCc-hhhHHHHHHHHHHHHhCCCCCCCCCh
Q psy3574          68 --KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKG-GYNQ-QCDIWAVGITAIELAELQPPMFDLHP  143 (302)
Q Consensus        68 --~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~-~~DiwslG~il~ell~g~~pf~~~~~  143 (302)
                        ++.++.+||+|||.+......  ......|+..|+|||++.   +. .++. ++|||||||++|+|++|..||.....
T Consensus       183 il~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~---~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  257 (348)
T 2pml_X          183 ILMDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFS---NESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS  257 (348)
T ss_dssp             EEECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGS---SCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC
T ss_pred             EEEcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhc---CCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence              888999999999999876543  334567999999999996   33 4555 99999999999999999999987766


Q ss_pred             -HHHHHHHHhcCCCCCCCC--------------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhh
Q psy3574         144 -MRALFLMSKSGFKPPALK--------------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERK  208 (302)
Q Consensus       144 -~~~~~~i~~~~~~~~~~~--------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~  208 (302)
                       ......+.......+...              ....++..+.+||.+||..||.+|||+.++++               
T Consensus       258 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~---------------  322 (348)
T 2pml_X          258 LVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK---------------  322 (348)
T ss_dssp             SHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT---------------
T ss_pred             HHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc---------------
Confidence             555555555433333110              01457899999999999999999999999999               


Q ss_pred             CCCCCCccccCCCccccchhhHH
Q psy3574         209 GGYNQQCDIWAHPFFKYDMSKRV  231 (302)
Q Consensus       209 ~~~~~~~~i~~hp~f~~~~~~~~  231 (302)
                                 ||||....+...
T Consensus       323 -----------hp~f~~~~~~~~  334 (348)
T 2pml_X          323 -----------HEWLADTNIEDL  334 (348)
T ss_dssp             -----------SGGGTTCCHHHH
T ss_pred             -----------CccccCCCHHHH
Confidence                       999998666543

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.9e-34  Score=262.80  Aligned_cols=187  Identities=19%  Similarity=0.215  Sum_probs=137.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C----
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K----   68 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~----   68 (302)
                      ||++|+.+.    .|+|||||.| +|. +++....  ..+.+..+..++.||+.||.|||++||+||||||    +    
T Consensus        80 Iv~l~~~~~~~~~~~lv~E~~~g-~L~-~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~  155 (432)
T 3p23_A           80 VIRYFCTEKDRQFQYIAIELCAA-TLQ-EYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPN  155 (432)
T ss_dssp             BCCEEEEEEETTEEEEEEECCSE-EHH-HHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCB
T ss_pred             cCeEEEEEecCCEEEEEEECCCC-CHH-HHHHhcC--CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCC
Confidence            577777665    4899999975 999 6666543  2567778899999999999999999999999999    3    


Q ss_pred             -CCCCCEEEecccccccccccc---ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCh
Q psy3574          69 -DRCGDVKLADFGVSAQITATI---NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHP  143 (302)
Q Consensus        69 -~~~~~ikL~DFg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~  143 (302)
                       +....+||+|||+++......   ......+||+.|+|||++.+.....++.++|||||||++|+|++ |..||.....
T Consensus       156 ~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~  235 (432)
T 3p23_A          156 AHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ  235 (432)
T ss_dssp             TTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT
T ss_pred             CCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH
Confidence             223468899999998765432   22345679999999999964334567889999999999999999 8999866544


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         144 MRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       144 ~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ......  ...............+..+.+||.+||+.||.+|||+.++++
T Consensus       236 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          236 RQANIL--LGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             HHHHHH--TTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHH--hccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            433222  222222222223345677899999999999999999999999

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=2.2e-34  Score=257.71  Aligned_cols=171  Identities=22%  Similarity=0.252  Sum_probs=137.5

Q ss_pred             eeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEeccccccccc
Q psy3574          11 VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQIT   86 (302)
Q Consensus        11 ~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~   86 (302)
                      |+||||+.+ +|. .++.  .   .+++..++.++.||+.||+|||++||+||||||    ++.++.+||+|||+++...
T Consensus       123 ~lv~e~~~~-~l~-~~~~--~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  195 (371)
T 4exu_A          123 YLVMPFMQT-DLQ-KIMG--M---EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD  195 (371)
T ss_dssp             EEEEECCCE-EHH-HHTT--S---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred             EEEEccccc-cHH-HHhh--c---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence            899999985 887 5552  2   599999999999999999999999999999999    8889999999999997654


Q ss_pred             cccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC-------
Q psy3574          87 ATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPA-------  159 (302)
Q Consensus        87 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~-------  159 (302)
                      ..   ....+||+.|+|||++.  ....++.++|||||||++|+|++|+.||.+.+..+....+......++.       
T Consensus       196 ~~---~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  270 (371)
T 4exu_A          196 AE---MTGYVVTRWYRAPEVIL--SWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN  270 (371)
T ss_dssp             -------CTTCCCTTSCHHHHS--CCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCS
T ss_pred             cC---cCCcccCccccCHHHhc--CCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhh
Confidence            32   34567899999999986  2356899999999999999999999999988877776665442211100       


Q ss_pred             -------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         160 -------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       160 -------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                         ......+++.+.+||.+||+.||.+|||+.++++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          271 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             CHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence                               0012356899999999999999999999999999

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.9e-34  Score=255.88  Aligned_cols=188  Identities=16%  Similarity=0.182  Sum_probs=155.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-------------cccccccchhHHHhhHHHHHHHHHhCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-------------AIELAELQPPMFDLHPMRALFLMSKSGFKPP   63 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hr   63 (302)
                      ||++++.+.    .|+||||+++|+|. +++.....             ...+++..++.++.||+.||.|||++||+||
T Consensus       137 Iv~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~  215 (382)
T 3tt0_A          137 IINLLGACTQDGPLYVIVEYASKGNLR-EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR  215 (382)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHH-HHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             hhhheeeeccCCceEEEEEecCCCcHH-HHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence            567777665    58999999999999 77765431             1248999999999999999999999999999


Q ss_pred             CCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCC
Q psy3574          64 ALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQP  136 (302)
Q Consensus        64 dlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~  136 (302)
                      ||||    ++.++.+||+|||+++.......  ......+|+.|+|||++.   +..++.++|||||||++|+|++ |..
T Consensus       216 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~DiwslG~il~ellt~g~~  292 (382)
T 3tt0_A          216 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF---DRIYTHQSDVWSFGVLLWEIFTLGGS  292 (382)
T ss_dssp             CCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHH---SCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhc---CCCCCchhHHHHHHHHHHHHHhCCCC
Confidence            9999    88889999999999987654321  223345788999999995   6778999999999999999999 999


Q ss_pred             CCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         137 PMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       137 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ||.+.........+......    ..+..++.++.+||.+||..||.+|||+.++++.+.
T Consensus       293 p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  348 (382)
T 3tt0_A          293 PYPGVPVEELFKLLKEGHRM----DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD  348 (382)
T ss_dssp             SSTTCCHHHHHHHHHTTCCC----CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHcCCCC----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            99988877776666554322    224568999999999999999999999999999654

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.4e-35  Score=255.75  Aligned_cols=194  Identities=15%  Similarity=0.178  Sum_probs=149.9

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C--
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K--   68 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~--   68 (302)
                      ||++++.+.      .|+||||++||+|. +++........+++..++.++.||+.||+|||++||+||||||    +  
T Consensus        69 iv~~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~  147 (319)
T 4euu_A           69 IVKLFAIEEETTTRHKVLIMEFCPCGSLY-TVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVI  147 (319)
T ss_dssp             BCCEEEEEECTTTCCEEEEEECCTTCBHH-HHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE
T ss_pred             cceEEEEeecCCCceEEEEEeCCCCCCHH-HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEec
Confidence            466776553      48999999999999 8887765333499999999999999999999999999999999    3  


Q ss_pred             --CCCCCEEEeccccccccccccccccccccCcccchhhccccc-----ccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q psy3574          69 --DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE-----RKGGYNQQCDIWAVGITAIELAELQPPMFDL  141 (302)
Q Consensus        69 --~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~~~DiwslG~il~ell~g~~pf~~~  141 (302)
                        +..+.+||+|||+++..... .......||+.|+|||++...     ....++.++|||||||++|+|++|..||...
T Consensus       148 ~~~~~~~~kL~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  226 (319)
T 4euu_A          148 GEDGQSVYKLTDFGAARELEDD-EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF  226 (319)
T ss_dssp             CTTSCEEEEECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECT
T ss_pred             cCCCCceEEEccCCCceecCCC-CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence              67788999999999876654 233456799999999998421     1356889999999999999999999999643


Q ss_pred             C----hHHHHHHHHhcCCC--------------------CCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         142 H----PMRALFLMSKSGFK--------------------PPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       142 ~----~~~~~~~i~~~~~~--------------------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .    .......+......                    +........++..+.+||.+||..||++|||++++|+++.
T Consensus       227 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          227 EGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             TCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             CccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence            2    33444444443211                    0011112234678899999999999999999999999543

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=6.8e-35  Score=256.51  Aligned_cols=183  Identities=15%  Similarity=0.242  Sum_probs=140.9

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      |+++++.+.      .|+||||+.+++|. .++.      .+++..++.++.||+.||+|||++||+||||||    ++.
T Consensus        93 i~~~~~~~~~~~~~~~~lv~e~~~~~~l~-~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~  165 (330)
T 3nsz_A           93 IITLADIVKDPVSRTPALVFEHVNNTDFK-QLYQ------TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH  165 (330)
T ss_dssp             BCCEEEEEECTTTCCEEEEEECCCCCCHH-HHGG------GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET
T ss_pred             EEEeeeeeccCCCCceEEEEeccCchhHH-HHHH------hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcC
Confidence            455666544      48999999999998 6653      488999999999999999999999999999999    554


Q ss_pred             CC-CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-ChHHHHH
Q psy3574          71 CG-DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL-HPMRALF  148 (302)
Q Consensus        71 ~~-~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-~~~~~~~  148 (302)
                      ++ .+||+|||+++..... .......|+..|+|||++.  ....++.++|||||||++|+|++|..||... .....+.
T Consensus       166 ~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~~~y~aPE~~~--~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~  242 (330)
T 3nsz_A          166 EHRKLRLIDWGLAEFYHPG-QEYNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV  242 (330)
T ss_dssp             TTTEEEECCCTTCEECCTT-CCCCSCCSCGGGCCHHHHT--TCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHH
T ss_pred             CCCEEEEEeCCCceEcCCC-CccccccccccccChhhhc--CCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHH
Confidence            55 8999999999876543 2334567899999999986  2356899999999999999999999999543 3322222


Q ss_pred             HHHh-------------cCCCCC-------------------CCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSK-------------SGFKPP-------------------ALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~-------------~~~~~~-------------------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+..             .....+                   .......++.++.+||.+||..||.+|||++++|+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          243 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             HHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            2211             110000                   00112237899999999999999999999999999

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=2.5e-34  Score=252.80  Aligned_cols=186  Identities=15%  Similarity=0.170  Sum_probs=152.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. +++....  ..+++..+..++.||+.||.|||++||+||||||    ++.++
T Consensus       112 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~  188 (325)
T 3kul_A          112 IIRLEGVVTRGRLAMIVTEYMENGSLD-TFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNL  188 (325)
T ss_dssp             BCCEEEEECGGGCCEEEEECCTTCBHH-HHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             CCcEEEEEEeCCccEEEeeCCCCCcHH-HHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCC
Confidence            567777665    58999999999999 7775542  2699999999999999999999999999999999    88899


Q ss_pred             CEEEecccccccccccccc---ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q psy3574          73 DVKLADFGVSAQITATINK---RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALF  148 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~  148 (302)
                      .+||+|||+++........   .....+|+.|+|||++.   +..++.++|||||||++|+|++ |..||.+........
T Consensus       189 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~  265 (325)
T 3kul_A          189 VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA---FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS  265 (325)
T ss_dssp             CEEECCCSSCEECC----CCEECC---CCGGGSCHHHHH---HCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHH
T ss_pred             CEEECCCCcccccccCccceeeccCCCCcccccCHhHhc---CCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence            9999999999876543222   12234577899999995   5668999999999999999999 999999988888777


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .+......+    .+..++..+.++|.+||..||.+||++.++++.+.
T Consensus       266 ~~~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~  309 (325)
T 3kul_A          266 SVEEGYRLP----APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD  309 (325)
T ss_dssp             HHHTTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHcCCCCC----CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            766543222    24568999999999999999999999999998554

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=3.7e-34  Score=251.19  Aligned_cols=186  Identities=17%  Similarity=0.166  Sum_probs=143.8

Q ss_pred             Cchhhhcch----------heeEEEecCCcchHHHHHHhccc---cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC
Q psy3574           1 MSRVFNHFL----------QVAAVERKGGYNQQCDIWAVGIT---AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD   67 (302)
Q Consensus         1 iv~~~~~~~----------~~iv~E~~~~g~L~~~~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp   67 (302)
                      ||++++.+.          .|+||||+.+|+|. +++.....   ...+++..+..++.||+.||+|||++||+||||||
T Consensus        87 iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp  165 (323)
T 3qup_A           87 VAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLH-AFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAA  165 (323)
T ss_dssp             BCCCCEEEECC-------CEEEEEECCTTCBHH-HHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             eehhhceeeccccccCCCccEEEEEeccCCcHH-HHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCc
Confidence            466777654          28999999999999 66644321   12488999999999999999999999999999999


Q ss_pred             ----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q psy3574          68 ----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFD  140 (302)
Q Consensus        68 ----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~  140 (302)
                          ++.++.+||+|||+++.......  ......+++.|+|||++.   +..++.++|||||||++|+|++ |..||.+
T Consensus       166 ~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~ell~~g~~p~~~  242 (323)
T 3qup_A          166 RNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLA---DNLYTVHSDVWAFGVTMWEIMTRGQTPYAG  242 (323)
T ss_dssp             GGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             ceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhc---CCCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence                88889999999999987644321  122335678899999985   6678999999999999999999 9999998


Q ss_pred             CChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         141 LHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       141 ~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      .........+......    ..+..++..+.+||.+||..||.+|||+.++++.
T Consensus       243 ~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  292 (323)
T 3qup_A          243 IENAEIYNYLIGGNRL----KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRME  292 (323)
T ss_dssp             CCGGGHHHHHHTTCCC----CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             cChHHHHHHHhcCCCC----CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            8877777666654322    2245678999999999999999999998877763

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=4.6e-34  Score=244.24  Aligned_cols=186  Identities=15%  Similarity=0.138  Sum_probs=154.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++|+|. +++....  ..+++..+..++.|++.||+|||++||+||||||    ++.++
T Consensus        67 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~  143 (269)
T 4hcu_A           67 LVQLYGVCLEQAPICLVFEFMEHGCLS-DYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ  143 (269)
T ss_dssp             BCCEEEEECSSSSEEEEEECCTTCBHH-HHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGG
T ss_pred             EeeEEEEEecCCceEEEEEeCCCCcHH-HHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCC
Confidence            467777665    48999999999999 7775533  2689999999999999999999999999999999    77889


Q ss_pred             CEEEecccccccccccc-ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATI-NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||++....... .......+++.|+|||++.   ...++.++||||+||++|+|++ |..||...........+
T Consensus       144 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~  220 (269)
T 4hcu_A          144 VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS---FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI  220 (269)
T ss_dssp             CEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH
T ss_pred             CEEeccccccccccccccccccCcccccccCCHHHhc---CCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence            99999999998664432 1223345678899999995   6678999999999999999999 99999988888777776


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ......    ..+..++..+.++|.+||..||.+||++.++++++.
T Consensus       221 ~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~  262 (269)
T 4hcu_A          221 STGFRL----YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLA  262 (269)
T ss_dssp             HTTCCC----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             hcCccC----CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence            654222    223557899999999999999999999999999654

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=4.4e-34  Score=248.54  Aligned_cols=184  Identities=15%  Similarity=0.183  Sum_probs=149.4

Q ss_pred             Cchhhhcc------hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHF------LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~------~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      ||++++.+      ..|+||||+.+| |. +++.... ...+++..+..++.||+.||.|||++||+||||||    ++.
T Consensus        68 i~~~~~~~~~~~~~~~~lv~e~~~~~-l~-~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~  144 (305)
T 2wtk_C           68 VIQLVDVLYNEEKQKMYMVMEYCVCG-MQ-EMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTT  144 (305)
T ss_dssp             BCCEEEEEECC---CEEEEEECCSEE-HH-HHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred             eeEEEEEEEcCCCCeEEEEehhccCC-HH-HHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcC
Confidence            46777765      358999999986 66 5555422 23699999999999999999999999999999999    788


Q ss_pred             CCCEEEecccccccccccc--ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q psy3574          71 CGDVKLADFGVSAQITATI--NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF  148 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  148 (302)
                      ++.+||+|||++.......  .......|++.|+|||++.+. ...++.++|||||||++|+|++|..||.+.+......
T Consensus       145 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~  223 (305)
T 2wtk_C          145 GGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGL-DTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFE  223 (305)
T ss_dssp             TCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCC-SCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             CCcEEeeccccccccCccccccccccCCCCCCCcChhhccCc-ccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH
Confidence            8999999999998764321  223345689999999998521 1223679999999999999999999999888877777


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+.......     +..++..+.+||.+||..||.+|||+.++++
T Consensus       224 ~i~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          224 NIGKGSYAI-----PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             HHHHCCCCC-----CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHhcCCCCC-----CCccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            776654332     3567899999999999999999999999999

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=3.7e-34  Score=247.46  Aligned_cols=192  Identities=18%  Similarity=0.248  Sum_probs=142.0

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++++...   .++||||++|++|. +++....  ..+++..+..++.||+.||.|||++||+||||||    ++.++.
T Consensus        82 iv~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~  158 (289)
T 3og7_A           82 ILLFMGYSTAPQLAIVTQWCEGSSLY-HHLHASE--TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT  158 (289)
T ss_dssp             BCCEEEEECSSSCEEEEECCCEEEHH-HHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTE
T ss_pred             EEEEEeeccCCccEEEEEecCCCcHH-HHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCC
Confidence            345555333   58999999999999 6664332  2699999999999999999999999999999999    778899


Q ss_pred             EEEeccccccccccc--cccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITAT--INKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||++......  ........||+.|+|||++.......++.++|||||||++|+|++|+.||.+...........
T Consensus       159 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~  238 (289)
T 3og7_A          159 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV  238 (289)
T ss_dssp             EEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHH
T ss_pred             EEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHh
Confidence            999999999765432  122334578999999999864445668889999999999999999999998866655554444


Q ss_pred             h-cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         152 K-SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       152 ~-~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      . ....+........++..+.+||.+||..||.+|||+.++++.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L  283 (289)
T 3og7_A          239 GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEI  283 (289)
T ss_dssp             HHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             cccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence            3 3333333344567899999999999999999999999999854

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=2.6e-34  Score=255.10  Aligned_cols=176  Identities=22%  Similarity=0.257  Sum_probs=141.3

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+||||+.+ +|. .++...    .+++..++.++.||+.||.|||++||+||||||    ++.++.+||+|||++...
T Consensus        89 ~~lv~e~~~~-~L~-~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (353)
T 2b9h_A           89 VYIIQELMQT-DLH-RVISTQ----MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII  162 (353)
T ss_dssp             EEEEECCCSE-EHH-HHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEeccCc-cHH-HHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence            5899999985 898 777654    599999999999999999999999999999999    888999999999999876


Q ss_pred             ccccc----------cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC
Q psy3574          86 TATIN----------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF  155 (302)
Q Consensus        86 ~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~  155 (302)
                      .....          .....+||+.|+|||++.  ....++.++|||||||++|+|++|..||.+.+.......+.....
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  240 (353)
T 2b9h_A          163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVML--TSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG  240 (353)
T ss_dssp             C----------------CCCCCCGGGCCHHHHH--SCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred             ccccccccCccccccchhhccccccccCCeeec--cCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhC
Confidence            53211          122357899999999875  245689999999999999999999999998877666554433211


Q ss_pred             CCCC---------------------------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         156 KPPA---------------------------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       156 ~~~~---------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+..                           ......++..+.+||.+||..||.+|||+.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            1110                           0012367899999999999999999999999999

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=6.4e-34  Score=243.39  Aligned_cols=182  Identities=17%  Similarity=0.263  Sum_probs=145.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCC---CCCCCCcC----CC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG---FKPPALKD----KD   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---i~Hrdlkp----~~   69 (302)
                      ||++++.+.    .|+||||++||+|. +++...    .+++..+..++.|++.||.|||++|   |+||||||    ++
T Consensus        68 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~  142 (271)
T 3dtc_A           68 IIALRGVCLKEPNLCLVMEFARGGPLN-RVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILIL  142 (271)
T ss_dssp             BCCEEEEECCC--CEEEEECCTTEEHH-HHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEES
T ss_pred             EeeEEEEEecCCceEEEEEcCCCCCHH-HHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEe
Confidence            466677655    58999999999998 777543    5999999999999999999999999   89999999    33


Q ss_pred             --------CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q psy3574          70 --------RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL  141 (302)
Q Consensus        70 --------~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  141 (302)
                              .++.+||+|||++.......  .....|++.|+|||++.   +..++.++||||||+++|+|++|+.||.+.
T Consensus       143 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~~l~~g~~p~~~~  217 (271)
T 3dtc_A          143 QKVENGDLSNKILKITDFGLAREWHRTT--KMSAAGAYAWMAPEVIR---ASMFSKGSDVWSYGVLLWELLTGEVPFRGI  217 (271)
T ss_dssp             SCCSSSCCSSCCEEECCCCC---------------CCGGGSCHHHHH---HCCCSHHHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred             cccccccccCcceEEccCCccccccccc--ccCCCCccceeCHHHhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                    27889999999998665432  23457899999999985   667899999999999999999999999988


Q ss_pred             ChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         142 HPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       142 ~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      +.......+.......+   .+..++..+.++|.+||..||.+|||+.++++++
T Consensus       218 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L  268 (271)
T 3dtc_A          218 DGLAVAYGVAMNKLALP---IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQL  268 (271)
T ss_dssp             CHHHHHHHHHTSCCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CHHHHHHhhhcCCCCCC---CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHH
Confidence            87777766665543332   3466899999999999999999999999999854

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=7.3e-34  Score=244.65  Aligned_cols=187  Identities=17%  Similarity=0.123  Sum_probs=155.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++|+|. +++....  ..+++..+..++.|++.||.|||++||+||||||    ++.++
T Consensus        81 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~  157 (283)
T 3gen_A           81 LVQLYGVCTKQRPIFIITEYMANGCLL-NYLREMR--HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG  157 (283)
T ss_dssp             BCCEEEEECSSSSEEEEECCCTTCBHH-HHHHCGG--GCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTS
T ss_pred             EeeEEEEEecCCCeEEEEeccCCCcHH-HHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCC
Confidence            467777665    48999999999999 7776522  2699999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||++........ ......+++.|+|||++.   ...++.++||||||+++|+|++ |..||...........+
T Consensus       158 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~  234 (283)
T 3gen_A          158 VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM---YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI  234 (283)
T ss_dssp             CEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHH---HCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred             CEEEccccccccccccccccccCCccCcccCCHHHhc---cCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHH
Confidence            999999999986644321 223345678899999995   5678999999999999999998 99999988888777776


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILI  197 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~  197 (302)
                      .......    .+..++..+.++|.+||..||.+|||+.++++++..
T Consensus       235 ~~~~~~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~  277 (283)
T 3gen_A          235 AQGLRLY----RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  277 (283)
T ss_dssp             HTTCCCC----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             hcccCCC----CCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence            6543222    235578999999999999999999999999996653

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=5.4e-34  Score=251.99  Aligned_cols=188  Identities=15%  Similarity=0.221  Sum_probs=154.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc---------------------cccccccchhHHHhhHHHHHHHH
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT---------------------AIELAELQPPMFDLHPMRALFLM   55 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~---------------------~~~l~~~~~~~i~~qi~~aL~~l   55 (302)
                      ||++++.+.    .|+||||+++|+|. +++.....                     ...+++.+++.++.||+.||.||
T Consensus       112 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~L  190 (343)
T 1luf_A          112 IVKLLGVCAVGKPMCLLFEYMAYGDLN-EFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL  190 (343)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHH-HHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEEccCCceEEEEecCCCCcHH-HHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            567777655    58999999999999 77765310                     13689999999999999999999


Q ss_pred             HhCCCCCCCCcC----CCCCCCEEEecccccccccccc--ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHH
Q psy3574          56 SKSGFKPPALKD----KDRCGDVKLADFGVSAQITATI--NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAI  129 (302)
Q Consensus        56 H~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~  129 (302)
                      |++||+||||||    ++.++.+||+|||+++......  .......+++.|+|||++.   ...++.++|||||||++|
T Consensus       191 H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~Di~slG~il~  267 (343)
T 1luf_A          191 SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF---YNRYTTESDVWAYGVVLW  267 (343)
T ss_dssp             HHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH---HCCCCHHHHHHHHHHHHH
T ss_pred             HhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhc---cCCcCcccccHHHHHHHH
Confidence            999999999999    8888999999999997664332  1223456788999999985   566899999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         130 ELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       130 ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      +|++ |..||.+.........+......    ..+..++..+.++|.+||..||.+||++.++++.+.
T Consensus       268 el~t~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~  331 (343)
T 1luf_A          268 EIFSYGLQPYYGMAHEEVIYYVRDGNIL----ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ  331 (343)
T ss_dssp             HHHTTTCCTTTTSCHHHHHHHHHTTCCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHhcCCCcCCCCChHHHHHHHhCCCcC----CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHH
Confidence            9999 99999988888777766655432    224568999999999999999999999999998554

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=2.5e-34  Score=252.20  Aligned_cols=186  Identities=22%  Similarity=0.300  Sum_probs=151.8

Q ss_pred             Cchhhhcch----heeEEEecCC-cchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC-C
Q psy3574           1 MSRVFNHFL----QVAAVERKGG-YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD-R   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~-g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~-~   70 (302)
                      |+++++.+.    .|+|||++.+ ++|. +++....   .+++..++.++.||+.||+|||++||+||||||    ++ .
T Consensus       110 i~~~~~~~~~~~~~~lv~e~~~~~~~L~-~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~  185 (320)
T 3a99_A          110 VIRLLDWFERPDSFVLILERPEPVQDLF-DFITERG---ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN  185 (320)
T ss_dssp             BCCEEEEEECSSEEEEEEECCSSEEEHH-HHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT
T ss_pred             ceEEEEEEecCCcEEEEEEcCCCCccHH-HHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCC
Confidence            456666655    5899999986 8999 7777766   799999999999999999999999999999999    55 6


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGG-YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      ++.+||+|||++......  ......||+.|+|||++.   ... ++.++|||||||++|+|++|+.||....      .
T Consensus       186 ~~~~kL~Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~---~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~  254 (320)
T 3a99_A          186 RGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIR---YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------E  254 (320)
T ss_dssp             TTEEEECCCTTCEECCSS--CBCCCCSCGGGSCHHHHH---HSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------H
T ss_pred             CCCEEEeeCccccccccc--cccCCCCCccCCChHHhc---cCCCCCccchHHhHHHHHHHHHHCCCCCCChh------h
Confidence            789999999999876543  233457999999999985   333 4688999999999999999999996532      1


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhh
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSK  229 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~  229 (302)
                      +.....     .....++.++.+||.+||..||.+|||+.++++                          ||||+.....
T Consensus       255 ~~~~~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~--------------------------hp~~~~~~~~  303 (320)
T 3a99_A          255 IIRGQV-----FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN--------------------------HPWMQDVLLP  303 (320)
T ss_dssp             HHHCCC-----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT--------------------------SGGGSSCCCH
T ss_pred             hhcccc-----cccccCCHHHHHHHHHHccCChhhCcCHHHHhc--------------------------CHhhcCccCc
Confidence            222221     123567999999999999999999999999999                          9999976655


Q ss_pred             HHH
Q psy3574         230 RVA  232 (302)
Q Consensus       230 ~~~  232 (302)
                      ...
T Consensus       304 ~~~  306 (320)
T 3a99_A          304 QET  306 (320)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            443

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=4e-34  Score=246.24  Aligned_cols=186  Identities=15%  Similarity=0.158  Sum_probs=143.2

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++++.+.   .|+||||+++|+|. +++....  ..+++..+..++.|++.||.|||++||+||||||    ++.++.
T Consensus        78 iv~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~  154 (281)
T 1mp8_A           78 IVKLIGVITENPVWIIMELCTLGELR-SFLQVRK--YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC  154 (281)
T ss_dssp             BCCEEEEECSSSCEEEEECCTTEEHH-HHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE
T ss_pred             cceEEEEEccCccEEEEecCCCCCHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCC
Confidence            466776654   58999999999999 6666443  2689999999999999999999999999999999    777899


Q ss_pred             EEEecccccccccccccc-ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATINK-RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||+++........ .....+++.|+|||++.   ...++.++|||||||++|+|++ |..||.+.........+.
T Consensus       155 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~  231 (281)
T 1mp8_A          155 VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN---FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE  231 (281)
T ss_dssp             EEECC-------------------CCGGGCCHHHHH---HCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH
T ss_pred             EEECccccccccCcccccccccCCCcccccChhhcc---cCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH
Confidence            999999999876543211 22335678899999995   6678999999999999999996 999998887777666665


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .....    ..+..++..+.++|.+||..||.+|||+.++++.+.
T Consensus       232 ~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  272 (281)
T 1mp8_A          232 NGERL----PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS  272 (281)
T ss_dssp             TTCCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cCCCC----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            54322    224668999999999999999999999999998664

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=7.4e-35  Score=260.07  Aligned_cols=189  Identities=13%  Similarity=0.145  Sum_probs=144.9

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~   68 (302)
                      ||++|+.+.        .||||||+ ||+|. +++....  ..+++..+..++.||+.||+|||++||+||||||    +
T Consensus       110 iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~-~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill  185 (364)
T 3op5_A          110 VPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQ-KIYEANA--KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLL  185 (364)
T ss_dssp             SCCEEEEEEEEETTEEEEEEEEECE-EEEHH-HHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             CCeEEeeeeeccCCcceEEEEEeCC-CCCHH-HHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEE
Confidence            567777654        58999999 99999 7776642  2799999999999999999999999999999999    5


Q ss_pred             C--CCCCEEEecccccccccccccc-------ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCC
Q psy3574          69 D--RCGDVKLADFGVSAQITATINK-------RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMF  139 (302)
Q Consensus        69 ~--~~~~ikL~DFg~a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~  139 (302)
                      +  .++.+||+|||+++.+......       ....+||+.|+|||++.   +..++.++|||||||++|+|++|+.||.
T Consensus       186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~~g~~Pf~  262 (364)
T 3op5_A          186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHN---GVAPSRRGDLEILGYCMIQWLTGHLPWE  262 (364)
T ss_dssp             ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHT---TCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred             ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhC---CCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence            5  7899999999999876543211       13445999999999995   6668999999999999999999999997


Q ss_pred             CCChHHHHHHHHhcCC--CCCC----CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         140 DLHPMRALFLMSKSGF--KPPA----LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       140 ~~~~~~~~~~i~~~~~--~~~~----~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      +...............  ..+.    ......++.++.++|..||..+|.+||++.++++.+.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~  325 (364)
T 3op5_A          263 DNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILL  325 (364)
T ss_dssp             GGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred             ccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            5322211111111000  0000    0001456899999999999999999999999988443

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=4e-34  Score=247.86  Aligned_cols=180  Identities=13%  Similarity=0.136  Sum_probs=143.1

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC-----EEEeccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD-----VKLADFG   80 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~-----ikL~DFg   80 (302)
                      .|+||||+ +++|. +++...+  .++++..+..++.||+.||+|||++||+||||||    ++.++.     +||+|||
T Consensus        81 ~~lv~e~~-~~~L~-~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg  156 (298)
T 1csn_A           81 NVLVIDLL-GPSLE-DLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG  156 (298)
T ss_dssp             EEEEEECC-CCBHH-HHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred             eEEEEEec-CCCHH-HHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence            48999999 88999 7776543  2699999999999999999999999999999999    544444     9999999


Q ss_pred             cccccccccc-------cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC---ChHHHHHHH
Q psy3574          81 VSAQITATIN-------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL---HPMRALFLM  150 (302)
Q Consensus        81 ~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~---~~~~~~~~i  150 (302)
                      +++.......       ......||+.|+|||++.   +..++.++|||||||++|+|++|+.||.+.   ........+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~  233 (298)
T 1csn_A          157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHL---GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI  233 (298)
T ss_dssp             TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHT---TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHH
T ss_pred             cccccccccccccccccCccCCCCCcccCCchhhc---CCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHH
Confidence            9987654322       124557999999999985   666899999999999999999999999874   333444443


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .......+.......++..+.++|.+||..||.+||++.++++.+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~  279 (298)
T 1csn_A          234 GEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS  279 (298)
T ss_dssp             HHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred             HhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence            3322222222223467899999999999999999999999988554

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=5.9e-34  Score=243.31  Aligned_cols=186  Identities=19%  Similarity=0.144  Sum_probs=153.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++|+|. +++....  ..+++..+..++.|++.||+|||++||+||||||    ++.++
T Consensus        65 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~  141 (268)
T 3sxs_A           65 LVKFYGVCSKEYPIYIVTEYISNGCLL-NYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDL  141 (268)
T ss_dssp             BCCEEEEECSSSSEEEEEECCTTCBHH-HHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTC
T ss_pred             EeeEEEEEccCCceEEEEEccCCCcHH-HHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCC
Confidence            466777655    48999999999999 6666543  2699999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||++........ ......+++.|+|||++.   +..++.++||||||+++|+|++ |..||...........+
T Consensus       142 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~  218 (268)
T 3sxs_A          142 CVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFH---YFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV  218 (268)
T ss_dssp             CEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHH---HSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred             CEEEccCccceecchhhhhcccCCCcCcccCCHHHHh---ccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHH
Confidence            999999999986654321 122344677899999985   5568899999999999999999 99999988888777666


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ........    +..++..+.++|.+||..||.+|||+.++++++.
T Consensus       219 ~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~  260 (268)
T 3sxs_A          219 SQGHRLYR----PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIE  260 (268)
T ss_dssp             HTTCCCCC----CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHG
T ss_pred             HcCCCCCC----CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            65432222    3557899999999999999999999999999553

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=7.3e-34  Score=252.48  Aligned_cols=172  Identities=21%  Similarity=0.222  Sum_probs=137.6

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      +|+||||+.+ +|. .++.  .   .+++..++.++.||+.||.|||++||+||||||    ++.++.+||+|||++...
T Consensus       104 ~~lv~e~~~~-~l~-~~~~--~---~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  176 (353)
T 3coi_A          104 FYLVMPFMQT-DLQ-KIMG--L---KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA  176 (353)
T ss_dssp             CEEEEECCSE-EGG-GTTT--S---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred             EEEEeccccC-CHH-HHhc--C---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence            3899999985 888 5543  2   589999999999999999999999999999999    888899999999999765


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC---------
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFK---------  156 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~---------  156 (302)
                      ...   .....||+.|+|||++.  ....++.++|||||||++|+|++|..||.+.+.......+......         
T Consensus       177 ~~~---~~~~~~t~~y~aPE~~~--~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  251 (353)
T 3coi_A          177 DAE---MTGYVVTRWYRAPEVIL--SWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL  251 (353)
T ss_dssp             ----------CCSBCCSCHHHHS--CCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTC
T ss_pred             CCC---ccccccCcCcCCHHHHh--CcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHH
Confidence            432   33457899999999986  2356889999999999999999999999988876666555432110         


Q ss_pred             -----------------CCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         157 -----------------PPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       157 -----------------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                       .........++..+.+||.+||..||.+|||+.++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          252 NDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             SCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                             0111123467899999999999999999999999999

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.5e-34  Score=252.74  Aligned_cols=177  Identities=19%  Similarity=0.230  Sum_probs=141.0

Q ss_pred             hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC-CCCCEEEecccccc
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD-RCGDVKLADFGVSA   83 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~-~~~~ikL~DFg~a~   83 (302)
                      ..|+||||++| +|. +++..+    ++++..++.++.||+.||+|||++||+||||||    ++ .++.+||+|||++.
T Consensus        96 ~~~lv~e~~~~-~L~-~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~  169 (320)
T 2i6l_A           96 SVYIVQEYMET-DLA-NVLEQG----PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLAR  169 (320)
T ss_dssp             EEEEEEECCSE-EHH-HHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCB
T ss_pred             ceeEEeeccCC-CHH-HHhhcC----CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCcccc
Confidence            35899999985 999 777543    599999999999999999999999999999999    53 56799999999998


Q ss_pred             cccccc---ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC---
Q psy3574          84 QITATI---NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKP---  157 (302)
Q Consensus        84 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~---  157 (302)
                      ......   .......++..|+|||++.  ....++.++|||||||++|+|++|+.||.+.........+.......   
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  247 (320)
T 2i6l_A          170 IMDPHYSHKGHLSEGLVTKWYRSPRLLL--SPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEE  247 (320)
T ss_dssp             CC--------CCCGGGSCCTTCCHHHHH--CTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHH
T ss_pred             ccCCCcccccccccccccccccCcHHhc--CcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchh
Confidence            764321   1223446799999999985  23568999999999999999999999999888777666555432110   


Q ss_pred             -------------------C---CCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         158 -------------------P---ALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       158 -------------------~---~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                                         +   .......++.++.+||.+||..||.+|||+.++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          248 DRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence                               0   00112457999999999999999999999999999

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=6.3e-34  Score=255.24  Aligned_cols=187  Identities=16%  Similarity=0.162  Sum_probs=152.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. +++...+  ..+++..+..++.||+.||+|||++||+||||||    ++.++
T Consensus       174 iv~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~  250 (377)
T 3cbl_A          174 IVRLIGVCTQKQPIYIVMELVQGGDFL-TFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN  250 (377)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHH-HHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             EEEEEEEEecCCCcEEEEEcCCCCCHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCC
Confidence            577777765    58999999999999 6666543  2689999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccc--cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKR--KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      .+||+|||+++.........  ....++..|+|||++.   ...++.++|||||||++|+|++ |..||.+.........
T Consensus       251 ~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~  327 (377)
T 3cbl_A          251 VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALN---YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREF  327 (377)
T ss_dssp             CEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHH---HCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHH
T ss_pred             cEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            99999999997654321111  1223567899999995   5568899999999999999998 9999998887776666


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILI  197 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~  197 (302)
                      +......    ..+..++..+.++|.+||..||.+|||+.++++.+..
T Consensus       328 ~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  371 (377)
T 3cbl_A          328 VEKGGRL----PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS  371 (377)
T ss_dssp             HHTTCCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHcCCCC----CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence            6554322    2245678999999999999999999999999986543

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=3e-34  Score=252.73  Aligned_cols=188  Identities=13%  Similarity=0.156  Sum_probs=146.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+ +|+|. +++....  ..+++..+..++.||+.||+|||++||+||||||    ++.++
T Consensus        67 i~~~~~~~~~~~~~~lv~e~~-~~~L~-~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~  142 (330)
T 2izr_A           67 IPQVYYFGPCGKYNAMVLELL-GPSLE-DLFDLCD--RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPG  142 (330)
T ss_dssp             SCCEEEEEEETTEEEEEEECC-CCBHH-HHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGG
T ss_pred             CCEEEEEEecCCccEEEEEeC-CCCHH-HHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCC
Confidence            456666554    48999999 88999 7776532  2799999999999999999999999999999999    66666


Q ss_pred             C-----EEEecccccccccccccc-------ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q psy3574          73 D-----VKLADFGVSAQITATINK-------RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFD  140 (302)
Q Consensus        73 ~-----ikL~DFg~a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  140 (302)
                      .     +||+|||+++........       ....+||+.|+|||++.   +..++.++|||||||++|+|++|..||.+
T Consensus       143 ~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~il~ell~g~~Pf~~  219 (330)
T 2izr_A          143 NKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHL---GKEQSRRDDLEALGHMFMYFLRGSLPWQG  219 (330)
T ss_dssp             GTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHT---TCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHc---CCCCCchhHHHHHHHHHHHHhcCCCCccc
Confidence            5     999999999876543221       24567999999999996   66789999999999999999999999987


Q ss_pred             C---ChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         141 L---HPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       141 ~---~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .   ........+.......+.......++ ++.++|..||..||.+||++.++++.+.
T Consensus       220 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~  277 (330)
T 2izr_A          220 LKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFT  277 (330)
T ss_dssp             CCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred             cccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence            4   33333444433222222111123344 9999999999999999999999988543

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=6e-34  Score=250.56  Aligned_cols=185  Identities=15%  Similarity=0.115  Sum_probs=150.9

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.   .++|+||+.+|+|. +++.. ..   .+++..+..++.||+.||.|||++||+||||||    ++.++
T Consensus        79 iv~~~~~~~~~~~~~v~e~~~~g~L~-~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~  154 (327)
T 3poz_A           79 VCRLLGICLTSTVQLITQLMPFGCLL-DYVREHKD---NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ  154 (327)
T ss_dssp             BCCEEEEEESSSEEEEEECCTTCBHH-HHHHHSTT---SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT
T ss_pred             EeEEEEEEecCCeEEEEEecCCCcHH-HHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCC
Confidence            467777665   47999999999999 55554 44   799999999999999999999999999999999    78889


Q ss_pred             CEEEecccccccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      .+||+|||+++........  .....+|..|+|||++.   +..++.++|||||||++|+|++ |..||.+.........
T Consensus       155 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~  231 (327)
T 3poz_A          155 HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL---HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI  231 (327)
T ss_dssp             EEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH
T ss_pred             CEEEccCcceeEccCCcccccccCCCccccccChHHhc---cCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHH
Confidence            9999999999876543222  22335678999999996   6778999999999999999999 9999988777666555


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      +......    ..+..++..+.+++.+||..||.+||++.++++.+.
T Consensus       232 ~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  274 (327)
T 3poz_A          232 LEKGERL----PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS  274 (327)
T ss_dssp             HHTTCCC----CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             HHcCCCC----CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence            5543322    124567899999999999999999999999998654

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=1.2e-33  Score=247.83  Aligned_cols=188  Identities=18%  Similarity=0.237  Sum_probs=153.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-------cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC--
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-------AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD--   67 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp--   67 (302)
                      |+++++.+.    .|+||||+++|+|. +++.....       ...+++..+..++.||+.||.|||++||+||||||  
T Consensus        90 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~N  168 (322)
T 1p4o_A           90 VVRLLGVVSQGQPTLVIMELMTRGDLK-SYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARN  168 (322)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHH-HHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGG
T ss_pred             EeeeEEEEccCCccEEEEEeCCCCcHH-HHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccce
Confidence            466676654    58999999999999 77765321       02468889999999999999999999999999999  


Q ss_pred             --CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q psy3574          68 --KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLH  142 (302)
Q Consensus        68 --~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~  142 (302)
                        ++.++.+||+|||++........  ......+++.|+|||++.   +..++.++|||||||++|+|++ |..||.+..
T Consensus       169 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~el~~~g~~p~~~~~  245 (322)
T 1p4o_A          169 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK---DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS  245 (322)
T ss_dssp             EEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC
T ss_pred             EEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhc---cCCCCchhhHHHHHHHHHHHHhcCCCccccCC
Confidence              88889999999999986644321  122345688999999985   6668999999999999999999 899999888


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         143 PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       143 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .......+.......    .+..++..+.++|.+||..||.+|||+.++++++.
T Consensus       246 ~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~  295 (322)
T 1p4o_A          246 NEQVLRFVMEGGLLD----KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  295 (322)
T ss_dssp             HHHHHHHHHTTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHG
T ss_pred             HHHHHHHHHcCCcCC----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence            777776666544322    24568999999999999999999999999999553

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.7e-34  Score=252.11  Aligned_cols=190  Identities=17%  Similarity=0.165  Sum_probs=153.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcccc--------------------ccccccchhHHHhhHHHHHHHHH
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITA--------------------IELAELQPPMFDLHPMRALFLMS   56 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~--------------------~~l~~~~~~~i~~qi~~aL~~lH   56 (302)
                      ||++++.+.    .|+||||+++|+|. +++......                    ..+++..+..++.||+.||.|||
T Consensus       111 iv~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  189 (344)
T 1rjb_A          111 IVNLLGACTLSGPIYLIFEYCCYGDLL-NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE  189 (344)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHH-HHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH
T ss_pred             eeeEEEEEeeCCccEEEEecCCCCcHH-HHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence            567777665    58999999999999 777654311                    13788899999999999999999


Q ss_pred             hCCCCCCCCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHH
Q psy3574          57 KSGFKPPALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIE  130 (302)
Q Consensus        57 ~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~e  130 (302)
                      ++||+||||||    ++.++.+||+|||++........  ......||+.|+|||++.   +..++.++|||||||++|+
T Consensus       190 ~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~Di~slG~il~e  266 (344)
T 1rjb_A          190 FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF---EGIYTIKSDVWSYGILLWE  266 (344)
T ss_dssp             HTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH---HCCCCHHHHHHHHHHHHHH
T ss_pred             hCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhc---cCCCChhHhHHHHHHHHHH
Confidence            99999999999    88889999999999987654322  123345788999999985   5678999999999999999


Q ss_pred             HHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q psy3574         131 LAE-LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILI  197 (302)
Q Consensus       131 ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~  197 (302)
                      |++ |..||.+.........+.......+   .+..++..+.+||.+||..||.+|||+.++++++..
T Consensus       267 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~  331 (344)
T 1rjb_A          267 IFSLGVNPYPGIPVDANFYKLIQNGFKMD---QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  331 (344)
T ss_dssp             HTTTSCCSSTTCCCSHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHcCCCCCcccCCcHHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence            998 9999988766555555555443332   235679999999999999999999999999996654

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=2.4e-34  Score=262.56  Aligned_cols=189  Identities=19%  Similarity=0.195  Sum_probs=136.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcccc----ccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITA----IELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~   68 (302)
                      ||++|+.+.    .|+|||||. |+|. +++......    ...++..+..++.||+.||+|||++||+||||||    +
T Consensus        71 Iv~~~~~~~~~~~~~lv~E~~~-gsL~-~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl  148 (434)
T 2rio_A           71 VIRYYCSETTDRFLYIALELCN-LNLQ-DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILV  148 (434)
T ss_dssp             BCCEEEEEECSSEEEEEECCCS-EEHH-HHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred             cCeEEEEEecCCeEEEEEecCC-CCHH-HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEE
Confidence            577877765    589999996 5999 777765411    0124556788999999999999999999999999    3


Q ss_pred             C-------------CCCCEEEecccccccccccccc----ccccccCcccchhhccccc----ccCCCCchhhHHHHHHH
Q psy3574          69 D-------------RCGDVKLADFGVSAQITATINK----RKSFIGTPYWMAPEVAAVE----RKGGYNQQCDIWAVGIT  127 (302)
Q Consensus        69 ~-------------~~~~ikL~DFg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~----~~~~~~~~~DiwslG~i  127 (302)
                      +             ..+.+||+|||+++........    ....+||+.|+|||++.+.    ....++.++|||||||+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~i  228 (434)
T 2rio_A          149 STSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV  228 (434)
T ss_dssp             ECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHH
T ss_pred             ecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHH
Confidence            2             3468999999999877553221    2345799999999999631    12568899999999999


Q ss_pred             HHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCC--CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         128 AIELAE-LQPPMFDLHPMRALFLMSKSGFKPPALK--DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       128 l~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~--~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +|+|++ |..||.+.....  ..+.......+...  ....++.++.+||.+||..||.+|||+.++++
T Consensus       229 l~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          229 FYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHhCCCCCCCCchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            999999 999997655443  23333332322221  12235688999999999999999999999999

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=1.7e-34  Score=258.05  Aligned_cols=184  Identities=18%  Similarity=0.175  Sum_probs=138.5

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC-CCCCCCCcC----
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS-GFKPPALKD----   67 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp----   67 (302)
                      |+++++.+.        .|+||||+ +++|. +++.... ...+++..++.++.||+.||+|||++ ||+||||||    
T Consensus        88 i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~-~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIl  164 (373)
T 1q8y_A           88 ILKLLDHFNHKGPNGVHVVMVFEVL-GENLL-ALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVL  164 (373)
T ss_dssp             BCCCCEEEEEEETTEEEEEEEECCC-CEEHH-HHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEE
T ss_pred             HHHHHHHhhccCCCCceEEEEEecC-CCCHH-HHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeE
Confidence            456666653        58999999 78999 6666532 12589999999999999999999998 999999999    


Q ss_pred             C------CCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q psy3574          68 K------DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL  141 (302)
Q Consensus        68 ~------~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  141 (302)
                      +      +..+.+||+|||++......   .....||+.|+|||++.   +..++.++|||||||++|+|++|..||...
T Consensus       165 l~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~---~~~~~~~~Di~slG~il~el~~g~~pf~~~  238 (373)
T 1q8y_A          165 MEIVDSPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLL---GAPWGCGADIWSTACLIFELITGDFLFEPD  238 (373)
T ss_dssp             EEEEETTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHH---TCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             EeccCCCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHh---CCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence            3      45568999999999776532   33457899999999996   666899999999999999999999999765


Q ss_pred             C------hHHHHHHHHhcCCCCCC-------------------------------------CCCCCCCCHHHHHHHHHhh
Q psy3574         142 H------PMRALFLMSKSGFKPPA-------------------------------------LKDKDRWSSTFHNFVKIAL  178 (302)
Q Consensus       142 ~------~~~~~~~i~~~~~~~~~-------------------------------------~~~~~~~s~~~~~li~~~L  178 (302)
                      .      .......+.......|.                                     ...+..++..+.+||.+||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  318 (373)
T 1q8y_A          239 EGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPML  318 (373)
T ss_dssp             ------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGG
T ss_pred             cccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHh
Confidence            4      22222222221101000                                     0112234678899999999


Q ss_pred             hcCCCCCCCHHHHHH
Q psy3574         179 TKNPKKRPTADKLLQ  193 (302)
Q Consensus       179 ~~dp~~R~t~~~ll~  193 (302)
                      +.||.+|||+.++++
T Consensus       319 ~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          319 QLDPRKRADAGGLVN  333 (373)
T ss_dssp             CSSTTTCBCHHHHHT
T ss_pred             ccCccccCCHHHHhh
Confidence            999999999999999

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=7.6e-34  Score=247.92  Aligned_cols=188  Identities=17%  Similarity=0.204  Sum_probs=153.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc---------------------cccccccchhHHHhhHHHHHHHH
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT---------------------AIELAELQPPMFDLHPMRALFLM   55 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~---------------------~~~l~~~~~~~i~~qi~~aL~~l   55 (302)
                      ||++++.+.    .|+||||++||+|. +++.....                     ...+++..+..++.||+.||.||
T Consensus        88 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l  166 (314)
T 2ivs_A           88 VIKLYGACSQDGPLLLIVEYAKYGSLR-GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL  166 (314)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHH-HHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHH
T ss_pred             eeeEEEEEecCCceEEEEeecCCCCHH-HHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHH
Confidence            567777665    58999999999999 77765431                     12488999999999999999999


Q ss_pred             HhCCCCCCCCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHH
Q psy3574          56 SKSGFKPPALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAI  129 (302)
Q Consensus        56 H~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~  129 (302)
                      |++||+||||||    ++.++.+||+|||++........  ......+++.|+|||++.   +..++.++|||||||++|
T Consensus       167 H~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~  243 (314)
T 2ivs_A          167 AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLF---DHIYTTQSDVWSFGVLLW  243 (314)
T ss_dssp             HHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHH---HCEECHHHHHHHHHHHHH
T ss_pred             HHCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhc---CCCcCchhhHHHHHHHHH
Confidence            999999999999    77889999999999986644322  123345788899999995   566889999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         130 ELAE-LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       130 ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      +|++ |..||.+.........+.....    ...+..++..+.++|.+||..||.+||++.++++.+.
T Consensus       244 el~t~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~  307 (314)
T 2ivs_A          244 EIVTLGGNPYPGIPPERLFNLLKTGHR----MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE  307 (314)
T ss_dssp             HHHTTSCCSSTTCCGGGHHHHHHTTCC----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHhCCCCCCCCCCHHHHHHHhhcCCc----CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            9999 9999988877666655554332    1224668999999999999999999999999998554

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=1.1e-33  Score=246.71  Aligned_cols=189  Identities=19%  Similarity=0.244  Sum_probs=152.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc---------------cccccccchhHHHhhHHHHHHHHHhCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT---------------AIELAELQPPMFDLHPMRALFLMSKSGFK   61 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~---------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~   61 (302)
                      ||++++.+.    .|+||||+++|+|. +++.....               ...+++..+..++.||+.||.|||++||+
T Consensus        89 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  167 (313)
T 1t46_A           89 IVNLLGACTIGGPTLVITEYCCYGDLL-NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI  167 (313)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTEEHH-HHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             eeeEEEEEecCCCcEEEEecCCCCCHH-HHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            467777665    58999999999999 77765431               12489999999999999999999999999


Q ss_pred             CCCCcC----CCCCCCEEEecccccccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-C
Q psy3574          62 PPALKD----KDRCGDVKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-L  134 (302)
Q Consensus        62 Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g  134 (302)
                      ||||||    ++.++.+||+|||++.........  .....+++.|+|||++.   ...++.++|||||||++|+|++ |
T Consensus       168 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~ellt~g  244 (313)
T 1t46_A          168 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF---NCVYTFESDVWSYGIFLWELFSLG  244 (313)
T ss_dssp             CSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred             cCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhc---CCCCChHHHHHHHHHHHHHHHhCC
Confidence            999999    778899999999999876543221  22345778899999985   5678999999999999999999 9


Q ss_pred             CCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         135 QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       135 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ..||.+..................   .+..++..+.++|.+||..||.+|||+.++++.+.
T Consensus       245 ~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~  303 (313)
T 1t46_A          245 SSPYPGMPVDSKFYKMIKEGFRML---SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE  303 (313)
T ss_dssp             CCSSTTCCSSHHHHHHHHHTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCCcccchhHHHHHhccCCCCC---CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence            999987765555555444433322   23567999999999999999999999999999554

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=1.3e-33  Score=252.88  Aligned_cols=186  Identities=13%  Similarity=0.168  Sum_probs=142.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. +++....  ..+++.++..++.||+.||+|||++||+||||||    ++.++
T Consensus       108 iv~~~~~~~~~~~~~lv~e~~~~~sL~-~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  184 (373)
T 2qol_A          108 IIRLEGVVTKSKPVMIVTEYMENGSLD-SFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL  184 (373)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHH-HHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred             CCeEEEEEeeCCceEEEEeCCCCCcHH-HHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCC
Confidence            567777665    58999999999999 7776543  2689999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccc---cccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKR---KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALF  148 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~  148 (302)
                      .+||+|||+++.........   ....++..|+|||++.   ...++.++|||||||++|+|++ |..||..........
T Consensus       185 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~  261 (373)
T 2qol_A          185 VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA---YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK  261 (373)
T ss_dssp             CEEECCC----------------------CTTSCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHH
T ss_pred             CEEECcCccccccccCCccceeccCCCcCCCccChhhhc---cCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            99999999998765432211   1223567899999995   6678999999999999999998 999999888877766


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .+......+    .+..++..+.++|.+||..||.+||++.++++.+.
T Consensus       262 ~i~~~~~~~----~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~  305 (373)
T 2qol_A          262 AVDEGYRLP----PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD  305 (373)
T ss_dssp             HHHTTEECC----CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHcCCCCC----CCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHH
Confidence            665442222    23567899999999999999999999999998654

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=4.5e-34  Score=250.85  Aligned_cols=192  Identities=14%  Similarity=0.075  Sum_probs=145.6

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC----------CCCC
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS----------GFKP   62 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~----------~i~H   62 (302)
                      ||++++.+.        +|+||||+++|+|. ++++.+    .+++..+..++.|++.||+|||+.          ||+|
T Consensus        80 iv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH  154 (322)
T 3soc_A           80 ILQFIGAEKRGTSVDVDLWLITAFHEKGSLS-DFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISH  154 (322)
T ss_dssp             BCCEEEEEEEECSSSEEEEEEEECCTTCBHH-HHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEEC
T ss_pred             chhhcceeccCCCCCceEEEEEecCCCCCHH-HHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEe
Confidence            567777665        38999999999999 777664    499999999999999999999999          9999


Q ss_pred             CCCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccc--cCCCCchhhHHHHHHHHHHHHhC
Q psy3574          63 PALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVER--KGGYNQQCDIWAVGITAIELAEL  134 (302)
Q Consensus        63 rdlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~~~~~DiwslG~il~ell~g  134 (302)
                      |||||    ++.++.+||+|||+++.......  .....+||+.|+|||++.+..  ...++.++|||||||++|+|++|
T Consensus       155 ~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg  234 (322)
T 3soc_A          155 RDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASR  234 (322)
T ss_dssp             SCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhC
Confidence            99999    88899999999999987654322  233457999999999986210  12356788999999999999999


Q ss_pred             CCCCCCCC----------------hHHHHHHHHhcCCCCCCCC--CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         135 QPPMFDLH----------------PMRALFLMSKSGFKPPALK--DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       135 ~~pf~~~~----------------~~~~~~~i~~~~~~~~~~~--~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      +.||.+..                .......+......+....  .....+..+.+||.+||..||++|||+.++++.+.
T Consensus       235 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  314 (322)
T 3soc_A          235 CTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERIT  314 (322)
T ss_dssp             BTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            99996532                1222222222222221111  11123456999999999999999999999999665


Q ss_pred             H
Q psy3574         197 I  197 (302)
Q Consensus       197 ~  197 (302)
                      .
T Consensus       315 ~  315 (322)
T 3soc_A          315 Q  315 (322)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=2.9e-33  Score=238.97  Aligned_cols=185  Identities=18%  Similarity=0.275  Sum_probs=151.9

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCC--CCCCCCcC----C
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG--FKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--i~Hrdlkp----~   68 (302)
                      ||++++.+.      .|+||||++||+|. +++.... +..+++..+..++.||+.||+|||++|  |+||||||    +
T Consensus        69 iv~~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~  146 (271)
T 3kmu_A           69 VLPVLGACQSPPAPHPTLITHWMPYGSLY-NVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMI  146 (271)
T ss_dssp             EECEEEEECTTTSSSCEEEEECCTTCBHH-HHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEE
T ss_pred             hhheEEEEccCCCCCeEeeecccCCCcHH-HHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEE
Confidence            466776543      48999999999999 7777654 225899999999999999999999999  99999999    8


Q ss_pred             CCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q psy3574          69 DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF  148 (302)
Q Consensus        69 ~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  148 (302)
                      +.++.++|+|||++.....     ....||+.|+|||++.+.....++.++|||||||++|+|++|..||.+........
T Consensus       147 ~~~~~~~l~~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~  221 (271)
T 3kmu_A          147 DEDMTARISMADVKFSFQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGM  221 (271)
T ss_dssp             CTTSCEEEEGGGSCCTTSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHH
T ss_pred             cCCcceeEEeccceeeecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHH
Confidence            8889999999888654322     23468999999999963333334458999999999999999999999888887777


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .+......+.   .+..++..+.++|.+||..||.+|||+.++++.+
T Consensus       222 ~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L  265 (271)
T 3kmu_A          222 KVALEGLRPT---IPPGISPHVSKLMKICMNEDPAKRPKFDMIVPIL  265 (271)
T ss_dssp             HHHHSCCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHhcCCCCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            7666554333   2466899999999999999999999999999854

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=1.7e-33  Score=258.35  Aligned_cols=186  Identities=16%  Similarity=0.217  Sum_probs=153.2

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++++.+.   .|+||||+.+|+|. +++.... +..+++..+..++.||+.||+|||++||+||||||    ++.++.
T Consensus       245 iv~l~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~  322 (454)
T 1qcf_A          245 LVKLHAVVTKEPIYIITEFMAKGSLL-DFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLV  322 (454)
T ss_dssp             BCCEEEEECSSSCEEEECCCTTCBHH-HHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCC
T ss_pred             EeeEEEEEeCCccEEEEeecCCCcHH-HHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCc
Confidence            466666554   58999999999999 7776542 12588889999999999999999999999999999    888999


Q ss_pred             EEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||+++....... ......++..|+|||++.   ...++.++|||||||++|+|++ |..||.+....+....+.
T Consensus       323 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~  399 (454)
T 1qcf_A          323 CKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN---FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE  399 (454)
T ss_dssp             EEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             EEEeeCCCceEcCCCceeccCCCcccccccCHHHhc---cCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            99999999987654321 122334678899999995   5679999999999999999999 999999988887777766


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ..... +   .+..++..+.++|.+||..||.+|||+.++++.+
T Consensus       400 ~~~~~-~---~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L  439 (454)
T 1qcf_A          400 RGYRM-P---RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL  439 (454)
T ss_dssp             HTCCC-C---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             cCCCC-C---CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence            54322 2   2467899999999999999999999999998844

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=1.3e-33  Score=246.64  Aligned_cols=189  Identities=16%  Similarity=0.168  Sum_probs=151.0

Q ss_pred             Cchhhhcch-----heeEEEecCCcchHHHHHHhccc-------------cccccccchhHHHhhHHHHHHHHHhCCCCC
Q psy3574           1 MSRVFNHFL-----QVAAVERKGGYNQQCDIWAVGIT-------------AIELAELQPPMFDLHPMRALFLMSKSGFKP   62 (302)
Q Consensus         1 iv~~~~~~~-----~~iv~E~~~~g~L~~~~~~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~H   62 (302)
                      ||++++.+.     +|+||||++||+|. +++.....             +..+++..+..++.||+.||.|||++||+|
T Consensus        93 iv~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H  171 (316)
T 2xir_A           93 VVNLLGACTKPGGPLMVIVEFCKFGNLS-TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH  171 (316)
T ss_dssp             BCCEEEEECCTTSCCEEEEECCTTEEHH-HHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             eeeEEEEEecCCCceEEEEEcCCCCcHH-HHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            466777654     68999999999999 77776541             112889999999999999999999999999


Q ss_pred             CCCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CC
Q psy3574          63 PALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQ  135 (302)
Q Consensus        63 rdlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~  135 (302)
                      |||||    ++.++.+||+|||+++.......  ......||+.|+|||++.   +..++.++|||||||++|+|++ |.
T Consensus       172 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~t~g~  248 (316)
T 2xir_A          172 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEIFSLGA  248 (316)
T ss_dssp             SCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             ccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhc---cccccchhHHHHHHHHHHHHHhCCC
Confidence            99999    77889999999999986644322  123446788999999995   6678999999999999999998 99


Q ss_pred             CCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         136 PPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       136 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .||.+.................   ..+..+++.+.++|.+||..||.+|||+.++++++.
T Consensus       249 ~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~  306 (316)
T 2xir_A          249 SPYPGVKIDEEFCRRLKEGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG  306 (316)
T ss_dssp             CSSTTCCCSHHHHHHHHHTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCcccchhHHHHHHhccCccC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            9998766444443333332222   123557899999999999999999999999999664

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.3e-33  Score=248.39  Aligned_cols=185  Identities=15%  Similarity=0.138  Sum_probs=146.2

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.   .++|+||+.+|+|. +++.. ..   .+++..+..++.||+.||.|||++||+||||||    ++.++
T Consensus        79 iv~~~~~~~~~~~~~v~~~~~~g~L~-~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~  154 (327)
T 3lzb_A           79 VCRLLGICLTSTVQLITQLMPFGCLL-DYVREHKD---NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ  154 (327)
T ss_dssp             BCCCCEEEESSSEEEEECCCSSCBHH-HHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT
T ss_pred             eeEEEEEEecCCceEEEEecCCCcHH-HHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCC
Confidence            567777665   48999999999999 55554 44   699999999999999999999999999999999    77889


Q ss_pred             CEEEecccccccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      .+||+|||+++........  .....++..|+|||++.   +..++.++|||||||++|+|++ |..||.+.........
T Consensus       155 ~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~  231 (327)
T 3lzb_A          155 HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL---HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI  231 (327)
T ss_dssp             EEEECCTTC----------------CCCGGGSCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH
T ss_pred             CEEEccCcceeEccCccccccccCCCccccccCHHHHc---CCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Confidence            9999999999876543221  22345678899999996   6678999999999999999999 9999988877766655


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      +......+    .+..++..+.++|.+||..||.+||++.++++.+.
T Consensus       232 ~~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~  274 (327)
T 3lzb_A          232 LEKGERLP----QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFS  274 (327)
T ss_dssp             HHTTCCCC----CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHcCCCCC----CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence            55443222    24567999999999999999999999999998554

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=2.4e-33  Score=241.89  Aligned_cols=185  Identities=16%  Similarity=0.274  Sum_probs=146.1

Q ss_pred             Cchhhhcchh--eeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCC--CCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFLQ--VAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG--FKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~~--~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+..  ++||||+++|+|.+.+.....   .+++..+..++.|++.||+|||++|  |+||||||    ++.++
T Consensus        85 i~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~  161 (287)
T 4f0f_A           85 IVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD  161 (287)
T ss_dssp             BCCEEEEETTTTEEEEECCTTCBHHHHHHCTTS---CCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCC
T ss_pred             chhhheeecCCCeEEEEecCCCCHHHHHhcccC---CccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccC
Confidence            4677776663  899999999999844444444   7999999999999999999999999  99999999    55555


Q ss_pred             C-----EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH--
Q psy3574          73 D-----VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR--  145 (302)
Q Consensus        73 ~-----ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--  145 (302)
                      .     +||+|||+++....   ......||+.|+|||++... ...++.++|||||||++|+|++|..||.......  
T Consensus       162 ~~~~~~~kl~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~-~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~  237 (287)
T 4f0f_A          162 ENAPVCAKVADFGLSQQSVH---SVSGLLGNFQWMAPETIGAE-EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK  237 (287)
T ss_dssp             TTCSCCEEECCCTTCBCCSS---CEECCCCCCTTSCGGGSSCS-SCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHH
T ss_pred             CCCceeEEeCCCCccccccc---cccccCCCccccCchhhccC-CCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHH
Confidence            4     99999999975543   23346799999999998421 3447889999999999999999999997654332  


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         146 ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       146 ~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ....+......+.   .+..+++.+.++|.+||..||.+|||+.++++.+
T Consensus       238 ~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L  284 (287)
T 4f0f_A          238 FINMIREEGLRPT---IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL  284 (287)
T ss_dssp             HHHHHHHSCCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHhccCCCCC---CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence            2334444333222   2467899999999999999999999999999843

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=1.3e-33  Score=246.64  Aligned_cols=185  Identities=18%  Similarity=0.286  Sum_probs=139.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---CCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---~~~~~~   73 (302)
                      ||++++.+.    .|+||| +.+++|. +++....   .+++..++.++.||+.||.|||++||+||||||   +-.++.
T Consensus        90 iv~~~~~~~~~~~~~lv~e-~~~~~L~-~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~  164 (313)
T 3cek_A           90 IIRLYDYEITDQYIYMVME-CGNIDLN-SWLKKKK---SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM  164 (313)
T ss_dssp             BCCEEEEEECSSEEEEEEC-CCSEEHH-HHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTE
T ss_pred             eEEEEEEeecCCEEEEEEe-cCCCcHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEECCe
Confidence            456666554    589999 5677999 7887766   799999999999999999999999999999999   324589


Q ss_pred             EEEeccccccccccccc--cccccccCcccchhhccccc--------ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh
Q psy3574          74 VKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVE--------RKGGYNQQCDIWAVGITAIELAELQPPMFDLHP  143 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~--------~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  143 (302)
                      +||+|||++........  ......|++.|+|||++.+.        ....++.++|||||||++|+|++|..||.....
T Consensus       165 ~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~  244 (313)
T 3cek_A          165 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN  244 (313)
T ss_dssp             EEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred             EEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH
Confidence            99999999987654322  12345789999999998531        114678999999999999999999999976543


Q ss_pred             H-HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         144 M-RALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       144 ~-~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      . .....+......   ...+...+..+.++|.+||..||.+||++.++++
T Consensus       245 ~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          245 QISKLHAIIDPNHE---IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             HHHHHHHHHCTTSC---CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHhcccc---cCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            3 333333332222   1223556889999999999999999999999999

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=4.7e-33  Score=239.44  Aligned_cols=186  Identities=17%  Similarity=0.188  Sum_probs=149.5

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      |+++++.+.   .|+||||+++|+|. +++....  ..+++..+..++.|++.||.|||++||+||||||    ++.++.
T Consensus        75 i~~~~~~~~~~~~~~v~e~~~~~~L~-~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~  151 (281)
T 3cc6_A           75 IVKLIGIIEEEPTWIIMELYPYGELG-HYLERNK--NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPEC  151 (281)
T ss_dssp             BCCEEEEECSSSCEEEEECCTTCBHH-HHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTE
T ss_pred             cceEEEEEcCCCCEEEEecCCCCCHH-HHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCc
Confidence            456666554   48999999999999 6665543  2689999999999999999999999999999999    778899


Q ss_pred             EEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||++........ ......++..|+|||++.   +..++.++|||||||++|+|++ |+.||...........+.
T Consensus       152 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~  228 (281)
T 3cc6_A          152 VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN---FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE  228 (281)
T ss_dssp             EEECCCCGGGCC---------CCCCCGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHH
T ss_pred             EEeCccCCCcccccccccccccCCCCcceeCchhhc---cCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHh
Confidence            99999999987654322 122345688899999985   6678999999999999999998 999998777666665555


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .....+    .+..+++.+.++|.+||..||.+||++.++++.+.
T Consensus       229 ~~~~~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~  269 (281)
T 3cc6_A          229 KGDRLP----KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLS  269 (281)
T ss_dssp             HTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cCCCCC----CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHH
Confidence            543222    23567899999999999999999999999998664

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-33  Score=252.01  Aligned_cols=186  Identities=15%  Similarity=0.193  Sum_probs=142.3

Q ss_pred             Cchhhhcch-----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL-----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~-----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.++     .|+||||+++|+|. +++....  ..+++..+..++.||+.||.|||++||+||||||    ++.+
T Consensus       152 Iv~~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~  228 (373)
T 3c1x_A          152 VLSLLGICLRSEGSPLVVLPYMKHGDLR-NFIRNET--HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK  228 (373)
T ss_dssp             BCCCCEEECCCSSCCEEEEECCTTCBHH-HHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             cceEEEEEEcCCCCeEEEEECCCCCCHH-HHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCC
Confidence            567777643     58999999999999 7776543  2588899999999999999999999999999999    8889


Q ss_pred             CCEEEeccccccccccccc----cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHH
Q psy3574          72 GDVKLADFGVSAQITATIN----KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRA  146 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~  146 (302)
                      +.+||+|||+++.......    ......+++.|+|||++.   +..++.++|||||||++|+|++ |.+||.+.+..+.
T Consensus       229 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~  305 (373)
T 3c1x_A          229 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ---TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI  305 (373)
T ss_dssp             CCEEECCC---------------------CCGGGSCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH
T ss_pred             CCEEEeeccccccccccccccccccCCCCCcccccChHHhc---CCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH
Confidence            9999999999986643211    122345678899999995   6678999999999999999999 7888877666555


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         147 LFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       147 ~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ...+......    ..+..++..+.++|.+||..||.+||++.++++.+.
T Consensus       306 ~~~~~~~~~~----~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~  351 (373)
T 3c1x_A          306 TVYLLQGRRL----LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS  351 (373)
T ss_dssp             HHHHHTTCCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHcCCCC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            5555444322    224567999999999999999999999999998554

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=1.8e-33  Score=245.96  Aligned_cols=185  Identities=28%  Similarity=0.455  Sum_probs=137.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhC-CCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKS-GFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp----~~~   70 (302)
                      ||++++.+.    .|+||||+ ++.+. .+... ..   .+++..++.++.||+.||.|||++ ||+||||+|    ++.
T Consensus        86 i~~~~~~~~~~~~~~lv~e~~-~~~~~-~l~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~  160 (318)
T 2dyl_A           86 IVQCFGTFITNTDVFIAMELM-GTCAE-KLKKRMQG---PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE  160 (318)
T ss_dssp             BCCEEEEEECSSEEEEEECCC-SEEHH-HHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECT
T ss_pred             eeeEEEEEecCCcEEEEEecc-CCcHH-HHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECC
Confidence            467777665    48999999 54665 55554 34   799999999999999999999996 999999999    888


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhccccc--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-ChHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAIELAELQPPMFDL-HPMRAL  147 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~-~~~~~~  147 (302)
                      ++.+||+|||++...... .......|++.|+|||++...  ....++.++|||||||++|+|++|..||... ......
T Consensus       161 ~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  239 (318)
T 2dyl_A          161 RGQIKLCDFGISGRLVDD-KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVL  239 (318)
T ss_dssp             TSCEEECCCTTC---------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH
T ss_pred             CCCEEEEECCCchhccCC-ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHH
Confidence            899999999999766543 223345789999999998421  1345789999999999999999999999864 444555


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         148 FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+....  .+.......++..+.+||.+||..||.+||++.++++
T Consensus       240 ~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          240 TKVLQEE--PPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             HHHHHSC--CCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHhccC--CCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            5555442  2222333467999999999999999999999999999

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=7.3e-34  Score=251.82  Aligned_cols=187  Identities=15%  Similarity=0.151  Sum_probs=144.3

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~   68 (302)
                      ||++++.+.        .|+||||+ |++|. +++...+   .+++..++.++.||+.||+|||++||+||||||    +
T Consensus       110 i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~-~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll  184 (345)
T 2v62_A          110 IPLFYGSGLTEFKGRSYRFMVMERL-GIDLQ-KISGQNG---TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLL  184 (345)
T ss_dssp             CCCEEEEEEEESSSCEEEEEEEECE-EEEHH-HHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             cceeecccccccCCCcEEEEEEecc-CCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEE
Confidence            466666543        58999999 89999 8887666   799999999999999999999999999999999    5


Q ss_pred             CCCC--CEEEeccccccccccccc-------cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCC
Q psy3574          69 DRCG--DVKLADFGVSAQITATIN-------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMF  139 (302)
Q Consensus        69 ~~~~--~ikL~DFg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~  139 (302)
                      +.++  .+||+|||+++.+.....       ......||+.|+|||++.   +..++.++|||||||++|+|++|..||.
T Consensus       185 ~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~il~ell~g~~pf~  261 (345)
T 2v62_A          185 GYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHK---GVALSRRSDVEILGYCMLRWLCGKLPWE  261 (345)
T ss_dssp             ESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHH---TCCCCHHHHHHHHHHHHHHHHHSSCTTG
T ss_pred             ccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhc---CCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence            5455  999999999987644321       123457999999999985   6678999999999999999999999995


Q ss_pred             CC--ChHHHHHHHHhcCCCCCCC----CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         140 DL--HPMRALFLMSKSGFKPPAL----KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       140 ~~--~~~~~~~~i~~~~~~~~~~----~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      +.  ................+..    .....++.++.++|.+||..||.+||++.++++.+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L  323 (345)
T 2v62_A          262 QNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKIL  323 (345)
T ss_dssp             GGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred             ccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence            42  2222222111111111100    01126789999999999999999999999999833

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=3.2e-33  Score=246.54  Aligned_cols=189  Identities=16%  Similarity=0.174  Sum_probs=153.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-------------cccccccchhHHHhhHHHHHHHHHhCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-------------AIELAELQPPMFDLHPMRALFLMSKSGFKPP   63 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hr   63 (302)
                      ||++++.+.    .|+||||+++|+|. +++.....             ...+++..+..++.||+.||.|||++||+||
T Consensus       103 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~  181 (334)
T 2pvf_A          103 IINLLGACTQDGPLYVIVEYASKGNLR-EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR  181 (334)
T ss_dssp             BCCEEEEECSSSCCEEEEECCTTCBHH-HHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             EeeEEEEEccCCceEEEEECCCCCcHH-HHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence            467777665    58999999999999 77765431             1238888999999999999999999999999


Q ss_pred             CCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCC
Q psy3574          64 ALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQP  136 (302)
Q Consensus        64 dlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~  136 (302)
                      ||||    ++.++.+||+|||++........  ......+++.|+|||++.   +..++.++|||||||++|+|++ |..
T Consensus       182 Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~ellt~g~~  258 (334)
T 2pvf_A          182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF---DRVYTHQSDVWSFGVLMWEIFTLGGS  258 (334)
T ss_dssp             CCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHH---HCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhc---CCCcChHHHHHHHHHHHHHHHhCCCC
Confidence            9999    88899999999999987654321  122345678899999985   5568899999999999999999 999


Q ss_pred             CCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q psy3574         137 PMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILI  197 (302)
Q Consensus       137 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~  197 (302)
                      ||.+.........+......    ..+..++..+.++|.+||..||.+||++.++++.+.-
T Consensus       259 p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  315 (334)
T 2pvf_A          259 PYPGIPVEELFKLLKEGHRM----DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  315 (334)
T ss_dssp             SSTTCCHHHHHHHHHHTCCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CcCcCCHHHHHHHHhcCCCC----CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            99988877776666554322    1245679999999999999999999999999986653

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=3.6e-33  Score=238.10  Aligned_cols=186  Identities=15%  Similarity=0.138  Sum_probs=153.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||+++|+|. +++....  ..+++..+..++.|++.||.|||++|++||||||    ++.++
T Consensus        65 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~  141 (267)
T 3t9t_A           65 LVQLYGVCLEQAPICLVTEFMEHGCLS-DYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ  141 (267)
T ss_dssp             BCCEEEEECSSSSCEEEECCCTTCBHH-HHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGG
T ss_pred             EeeEEEEEccCCCeEEEEeCCCCCcHH-HHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCC
Confidence            467777655    58999999999999 6666542  2689999999999999999999999999999999    78889


Q ss_pred             CEEEecccccccccccc-ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATI-NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||++....... .......++..|+|||++.   ...++.++|+||||+++|+|++ |..||...........+
T Consensus       142 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i  218 (267)
T 3t9t_A          142 VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS---FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI  218 (267)
T ss_dssp             CEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH
T ss_pred             CEEEcccccccccccccccccccccccccccChhhhc---CCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHH
Confidence            99999999998664321 1223345778899999995   5678999999999999999999 89999988877777666


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ......    ..+..++..+.++|.+||..||.+||++.++++.+.
T Consensus       219 ~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~  260 (267)
T 3t9t_A          219 STGFRL----YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLA  260 (267)
T ss_dssp             HTTCCC----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             hcCCcC----CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            554322    123557899999999999999999999999998654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.5e-33  Score=243.83  Aligned_cols=187  Identities=14%  Similarity=0.147  Sum_probs=147.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++|+|. +++....  ..+++..+..++.||+.||.|||++||+||||||    ++.++
T Consensus       108 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~  184 (333)
T 1mqb_A          108 IIRLEGVISKYKPMMIITEYMENGALD-KFLREKD--GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL  184 (333)
T ss_dssp             BCCEEEEECSSSSEEEEEECCTTEEHH-HHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred             CCcEEEEEecCCCcEEEEeCCCCCcHH-HHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCC
Confidence            467777655    48999999999999 6666542  2699999999999999999999999999999999    88899


Q ss_pred             CEEEecccccccccccccc---ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q psy3574          73 DVKLADFGVSAQITATINK---RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALF  148 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~  148 (302)
                      .+||+|||++.........   .....++..|+|||++.   ...++.++|||||||++|+|++ |..||.+........
T Consensus       185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~  261 (333)
T 1mqb_A          185 VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS---YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK  261 (333)
T ss_dssp             CEEECCCCC-----------------CCCGGGSCHHHHH---SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred             cEEECCCCcchhhccccccccccCCCCccccccCchhcc---cCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence            9999999999876543221   12234577899999985   6678999999999999999998 999999888877776


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILI  197 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~  197 (302)
                      .+...... +   .+..++..+.++|.+||..||.+||++.++++.+..
T Consensus       262 ~~~~~~~~-~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  306 (333)
T 1mqb_A          262 AINDGFRL-P---TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDK  306 (333)
T ss_dssp             HHHTTCCC-C---CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHCCCcC-C---CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            66554322 1   235679999999999999999999999999986643

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=2.4e-33  Score=242.95  Aligned_cols=187  Identities=13%  Similarity=0.163  Sum_probs=143.0

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      ||++++.+.      .|+||||+++|+|. +++....  ..+++..+..++.|++.||.|||++||+||||||    ++.
T Consensus        73 iv~~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~  149 (295)
T 3ugc_A           73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLR-DYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN  149 (295)
T ss_dssp             BCCEEEEECHHHHTSCEEEEECCTTCBHH-HHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE
T ss_pred             EeeEEEEEecCCCCceEEEEEeCCCCCHH-HHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcC
Confidence            567777653      58999999999999 6666543  2599999999999999999999999999999999    778


Q ss_pred             CCCEEEeccccccccccccc---cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH---
Q psy3574          71 CGDVKLADFGVSAQITATIN---KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM---  144 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---  144 (302)
                      ++.+||+|||++........   ......++..|+|||++.   +..++.++|||||||++|+|++|..|+......   
T Consensus       150 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~  226 (295)
T 3ugc_A          150 ENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT---ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMR  226 (295)
T ss_dssp             TTEEEECCCCSCC-------------CTTCGGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHH
T ss_pred             CCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhc---CCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHh
Confidence            89999999999987654321   122345677899999995   667899999999999999999999998643211   


Q ss_pred             -------------HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q psy3574         145 -------------RALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILI  197 (302)
Q Consensus       145 -------------~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~  197 (302)
                                   .....+. ...   ....+..++.++.++|.+||..||.+|||+.++++.+..
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~  288 (295)
T 3ugc_A          227 MIGNDKQGQMIVFHLIELLK-NNG---RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ  288 (295)
T ss_dssp             HHCTTCCTHHHHHHHHHHHH-TTC---CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             hhcCccccchhHHHHHHHHh-ccC---cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence                         1111111 111   122346789999999999999999999999999986543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=4.2e-33  Score=245.02  Aligned_cols=192  Identities=16%  Similarity=0.186  Sum_probs=153.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc----cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT----AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~   68 (302)
                      ||++++.+.    .|+||||++||+|. +++.....    ...+++..+..++.||+.||.|||++||+||||||    +
T Consensus        95 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli  173 (327)
T 2yfx_A           95 IVRCIGVSLQSLPRFILMELMAGGDLK-SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL  173 (327)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTEEHH-HHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             CCeEEEEEcCCCCcEEEEecCCCCcHH-HHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEE
Confidence            567777665    48999999999999 77766431    12488889999999999999999999999999999    4


Q ss_pred             C---CCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q psy3574          69 D---RCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLH  142 (302)
Q Consensus        69 ~---~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~  142 (302)
                      +   ..+.+||+|||++........  ......|++.|+|||++.   ...++.++|||||||++|+|++ |..||....
T Consensus       174 ~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~ellt~g~~p~~~~~  250 (327)
T 2yfx_A          174 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS  250 (327)
T ss_dssp             SCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             ecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhc---CCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC
Confidence            4   455799999999876543221  223446788999999985   5678999999999999999998 999998888


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhH
Q psy3574         143 PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRA  200 (302)
Q Consensus       143 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~  200 (302)
                      .......+.......    .+..++..+.++|.+||..||.+||++.+++++++....
T Consensus       251 ~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          251 NQEVLEFVTSGGRMD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             HHHHHHHHHTTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCC----CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            777766666543222    235678999999999999999999999999996665443

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1.9e-33  Score=267.50  Aligned_cols=184  Identities=14%  Similarity=0.130  Sum_probs=152.1

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++|+.+.   .|+||||+++|+|. +++....   .+++..+..++.||+.||+|||++||+||||||    ++.++.
T Consensus       432 Iv~l~~~~~~~~~~lv~E~~~~g~L~-~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~  507 (635)
T 4fl3_A          432 IVRMIGICEAESWMLVMEMAELGPLN-KYLQQNR---HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY  507 (635)
T ss_dssp             BCCEEEEEESSSEEEEEECCTTEEHH-HHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE
T ss_pred             EeeEEEEEecCCEEEEEEccCCCCHH-HHHhhCC---CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCC
Confidence            567777554   48999999999999 7887666   799999999999999999999999999999999    788899


Q ss_pred             EEEeccccccccccccc---cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          74 VKLADFGVSAQITATIN---KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      +||+|||+++.+.....   ......+|+.|+|||++.   ...++.++|||||||++|+|++ |..||.+....+....
T Consensus       508 ~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~---~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~  584 (635)
T 4fl3_A          508 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN---YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM  584 (635)
T ss_dssp             EEECCTTHHHHTTC-------------CGGGSCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH
T ss_pred             EEEEEcCCccccccCccccccccCCCCceeeeChhhhc---CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            99999999987654322   122334678899999995   6679999999999999999998 9999999888877777


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      +......    ..+..++.++.+||.+||..||++||++.++++.+
T Consensus       585 i~~~~~~----~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L  626 (635)
T 4fl3_A          585 LEKGERM----GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL  626 (635)
T ss_dssp             HHTTCCC----CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred             HHcCCCC----CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence            6654322    22456899999999999999999999999998855

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.7e-33  Score=245.85  Aligned_cols=173  Identities=21%  Similarity=0.284  Sum_probs=142.9

Q ss_pred             Cchhhhcch----heeEEEe-cCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC-C
Q psy3574           1 MSRVFNHFL----QVAAVER-KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD-R   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~-~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~-~   70 (302)
                      |+++++.+.    .|+|||| +.+++|. +++....   .+++..++.++.||+.||.|||++||+||||||    ++ .
T Consensus       100 i~~~~~~~~~~~~~~~v~e~~~~~~~L~-~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~  175 (312)
T 2iwi_A          100 VIRLLDWFETQEGFMLVLERPLPAQDLF-DYITEKG---PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLR  175 (312)
T ss_dssp             BCCEEEEC-----CEEEEECCSSEEEHH-HHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETT
T ss_pred             eeeEEEEEecCCeEEEEEEecCCCCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCC
Confidence            467777665    4899999 7899999 7777766   799999999999999999999999999999999    55 7


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      ++.+||+|||++......  ......|+..|+|||++.   ...+ +.++|||||||++|+|++|+.||....      .
T Consensus       176 ~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~---~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~  244 (312)
T 2iwi_A          176 RGCAKLIDFGSGALLHDE--PYTDFDGTRVYSPPEWIS---RHQYHALPATVWSLGILLYDMVCGDIPFERDQ------E  244 (312)
T ss_dssp             TTEEEECCCSSCEECCSS--CBCCCCSCTTTSCHHHHH---HSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------H
T ss_pred             CCeEEEEEcchhhhcccC--cccccCCcccccCceeee---cCCCCCccchHHHHHHHHHHHHHCCCCCCChH------H
Confidence            899999999999876543  234557899999999985   3333 568999999999999999999996532      1


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.....     ..+..++..+.++|.+||..||++||++.++++
T Consensus       245 ~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          245 ILEAEL-----HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             HHHTCC-----CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             Hhhhcc-----CCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            222221     223567999999999999999999999999999

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=4e-33  Score=241.16  Aligned_cols=185  Identities=14%  Similarity=0.123  Sum_probs=152.2

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      |+++++.+.   .|+||||+++|+|. +++....   .+++..+..++.||+.||.|||++||+||||||    ++.++.
T Consensus        80 i~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~  155 (291)
T 1xbb_A           80 IVRMIGICEAESWMLVMEMAELGPLN-KYLQQNR---HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY  155 (291)
T ss_dssp             BCCEEEEEESSSEEEEEECCTTEEHH-HHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE
T ss_pred             EEEEEEEECCCCcEEEEEeCCCCCHH-HHHHhCc---CCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCc
Confidence            456666553   58999999999999 7887766   799999999999999999999999999999999    778899


Q ss_pred             EEEecccccccccccccc---ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          74 VKLADFGVSAQITATINK---RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      +||+|||++.........   .....+++.|+|||++.   ...++.++||||||+++|+|++ |..||.+.........
T Consensus       156 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~  232 (291)
T 1xbb_A          156 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN---YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM  232 (291)
T ss_dssp             EEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHH---HCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH
T ss_pred             EEEccCCcceeeccCCCcccccccCCCCceeeChHHhc---cCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            999999999876543221   12234678899999995   5567899999999999999999 9999998887776666


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      +......    ..+..++..+.++|.+||..||.+||++.++++.+-
T Consensus       233 ~~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~  275 (291)
T 1xbb_A          233 LEKGERM----GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR  275 (291)
T ss_dssp             HHTTCCC----CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             HHcCCCC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            6554321    224568999999999999999999999999988664

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=4.2e-33  Score=243.39  Aligned_cols=188  Identities=16%  Similarity=0.144  Sum_probs=146.9

Q ss_pred             Cchhhhcch---------heeEEEecCCcchHHHHHHhcc---ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-
Q psy3574           1 MSRVFNHFL---------QVAAVERKGGYNQQCDIWAVGI---TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-   67 (302)
Q Consensus         1 iv~~~~~~~---------~~iv~E~~~~g~L~~~~~~~~~---~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-   67 (302)
                      ||++++.+.         .|+||||+++|+|. .++....   ....+++..++.++.||+.||.|||++||+|||||| 
T Consensus        98 iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~  176 (313)
T 3brb_A           98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLH-TYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAAR  176 (313)
T ss_dssp             BCCCCEEEEC-------CEEEEEECCTTCBHH-HHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGG
T ss_pred             eeeeeEEEeeccccCCcccEEEEecccCCCHH-HHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcc
Confidence            467777654         28999999999999 6664321   123699999999999999999999999999999999 


Q ss_pred             ---CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q psy3574          68 ---KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDL  141 (302)
Q Consensus        68 ---~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~  141 (302)
                         ++.++.+||+|||++........  ......+++.|+|||++.   +..++.++|||||||++|+|++ |..||.+.
T Consensus       177 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~el~~~g~~p~~~~  253 (313)
T 3brb_A          177 NCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLA---DRVYTSKSDVWAFGVTMWEIATRGMTPYPGV  253 (313)
T ss_dssp             GEEECTTSCEEECSCSCC----------------CCGGGSCHHHHH---SSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             eEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhc---CCCccchhhhHHHHHHHHHHHhcCCCCCccC
Confidence               88889999999999987654321  122345788999999995   6678999999999999999999 89999888


Q ss_pred             ChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         142 HPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       142 ~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ........+......    ..+..++..+.++|.+||..||.+||++.++++.+.
T Consensus       254 ~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~  304 (313)
T 3brb_A          254 QNHEMYDYLLHGHRL----KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLE  304 (313)
T ss_dssp             CGGGHHHHHHTTCCC----CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCC----CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            777666665554321    224668899999999999999999999999998664

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.7e-34  Score=250.69  Aligned_cols=186  Identities=19%  Similarity=0.229  Sum_probs=145.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. +++....  ..+++.++..++.||+.||+|||++||+||||||    ++.++
T Consensus        69 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~  145 (310)
T 3s95_A           69 VLKFIGVLYKDKRLNFITEYIKGGTLR-GIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENK  145 (310)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTCBHH-HHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTS
T ss_pred             cccEEEEEecCCeeEEEEEecCCCcHH-HHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCC
Confidence            567777665    58999999999999 7776632  2699999999999999999999999999999999    88899


Q ss_pred             CEEEecccccccccccccc--------------ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCC
Q psy3574          73 DVKLADFGVSAQITATINK--------------RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPM  138 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~--------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf  138 (302)
                      .+||+|||++.........              ....+||+.|+|||++.   +..++.++|||||||++|+|++|..||
T Consensus       146 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~~g~~~~  222 (310)
T 3s95_A          146 NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMIN---GRSYDEKVDVFSFGIVLCEIIGRVNAD  222 (310)
T ss_dssp             CEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHT---TCCCCTHHHHHHHHHHHHHHHHTCCSS
T ss_pred             CEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhc---CCCCCcHHHHHHHHHHHHHHhcCCCCC
Confidence            9999999999876443211              11457999999999996   677899999999999999999999998


Q ss_pred             CCCChHH-----HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHh
Q psy3574         139 FDLHPMR-----ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHR  199 (302)
Q Consensus       139 ~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~  199 (302)
                      .......     .........       .+..+++.+.++|.+||..||.+|||+.++++.+...+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~  281 (310)
T 3s95_A          223 PDYLPRTMDFGLNVRGFLDRY-------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR  281 (310)
T ss_dssp             TTTSCBCTTSSBCHHHHHHHT-------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cchhhhHHHHhhhhhcccccc-------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            6532110     001111110       12456888999999999999999999999998655433

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=5.2e-33  Score=242.44  Aligned_cols=185  Identities=18%  Similarity=0.364  Sum_probs=140.8

Q ss_pred             Cchhhhcch--heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh---CCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL--QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK---SGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~--~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.+.  .|+||||++||+|. +++........+++..+..++.|++.||+|||+   +||+||||||    ++.+
T Consensus        63 iv~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~  141 (307)
T 2eva_A           63 IVKLYGACLNPVCLVMEYAEGGSLY-NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAG  141 (307)
T ss_dssp             BCCEEEBCTTTTEEEEECCTTCBHH-HHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETT
T ss_pred             cCeEEEEEcCCcEEEEEcCCCCCHH-HHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCC
Confidence            567777665  58999999999999 888766522346778889999999999999999   8999999999    5566


Q ss_pred             CC-EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--hHHHHH
Q psy3574          72 GD-VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH--PMRALF  148 (302)
Q Consensus        72 ~~-ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~  148 (302)
                      +. +||+|||++......   .....||+.|+|||++.   +..++.++|||||||++|+|++|+.||....  ......
T Consensus       142 ~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~  215 (307)
T 2eva_A          142 GTVLKICDFGTACDIQTH---MTNNKGSAAWMAPEVFE---GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW  215 (307)
T ss_dssp             TTEEEECCCCC---------------CCTTSSCHHHHT---CCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHH
T ss_pred             CCEEEEcccccccccccc---cccCCCCCceEChhhhC---CCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHH
Confidence            65 799999999765432   22346899999999995   6678999999999999999999999997543  222222


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .+... ..++   ....++..+.++|.+||..||.+|||+.++++.+.
T Consensus       216 ~~~~~-~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~  259 (307)
T 2eva_A          216 AVHNG-TRPP---LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT  259 (307)
T ss_dssp             HHHTT-CCCC---CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHhcC-CCCC---cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence            22222 1222   23568999999999999999999999999998553

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=2.7e-33  Score=256.76  Aligned_cols=184  Identities=17%  Similarity=0.163  Sum_probs=150.4

Q ss_pred             Cchhhhcc-----hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHF-----LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~-----~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.+     ..|+||||+++|+|. +++...+ ...+++..+..++.||+.||+|||++||+||||||    ++.+
T Consensus       248 iv~~~~~~~~~~~~~~iv~e~~~~g~L~-~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~  325 (450)
T 1k9a_A          248 LVQLLGVIVEEKGGLYIVTEYMAKGSLV-DYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED  325 (450)
T ss_dssp             BCCEEEEEECTTSCEEEEEECCTTCBHH-HHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred             EEEEEEEEEcCCCceEEEEEecCCCcHH-HHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCC
Confidence            56777764     358999999999999 7776654 12378899999999999999999999999999999    8888


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      +.+||+|||+++.....   .....++..|+|||++.   ...++.++|||||||++|+|++ |..||.+....+....+
T Consensus       326 ~~~kl~DfG~a~~~~~~---~~~~~~~~~y~aPE~~~---~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i  399 (450)
T 1k9a_A          326 NVAKVSDFGLTKEASST---QDTGKLPVKWTAPEALR---EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV  399 (450)
T ss_dssp             SCEEECCCTTCEECC---------CCCTTTSCHHHHH---SSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHH
T ss_pred             CCEEEeeCCCccccccc---ccCCCCCcceeCHHHhc---CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            99999999999865432   12235788999999995   6779999999999999999998 99999887776666665


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .... ..   ..+..+++.+.++|.+||..||.+|||+.++++.+.
T Consensus       400 ~~~~-~~---~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~  441 (450)
T 1k9a_A          400 EKGY-KM---DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLE  441 (450)
T ss_dssp             HTTC-CC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HcCC-CC---CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence            5432 21   234678999999999999999999999999988543

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=3.4e-34  Score=251.95  Aligned_cols=190  Identities=25%  Similarity=0.394  Sum_probs=125.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhc--cccccccccchhHHHhhHHHHHHHHHhC-CCCCCCCcC----CC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVG--ITAIELAELQPPMFDLHPMRALFLMSKS-GFKPPALKD----KD   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~--~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp----~~   69 (302)
                      ||++++.+.    .|+||||+.+ +|. +++...  .....+++..+..++.|++.||.|||++ ||+||||||    ++
T Consensus        83 iv~~~~~~~~~~~~~lv~e~~~~-~l~-~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~  160 (327)
T 3aln_A           83 IVQFYGALFREGDCWICMELMST-SFD-KFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD  160 (327)
T ss_dssp             BCCEEEEEECSSEEEEEECCCSE-EHH-HHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEE
T ss_pred             EeeeeeEEEeCCceEEEEeecCC-ChH-HHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEc
Confidence            567777665    5899999987 777 555531  0112689999999999999999999999 999999999    78


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhccccc-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-HHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE-RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM-RAL  147 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~  147 (302)
                      .++.+||+|||+++...... ......|++.|+|||++... ....++.++|||||||++|+|++|..||.+.... ...
T Consensus       161 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  239 (327)
T 3aln_A          161 RSGNIKLCDFGISGQLVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL  239 (327)
T ss_dssp             TTTEEEECCCSSSCC-------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------
T ss_pred             CCCCEEEccCCCceeccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHH
Confidence            89999999999998765432 22334789999999998421 2455889999999999999999999999765432 222


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         148 FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+...............++..+.+||.+||..||.+||++.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          240 TQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            1111111111111123467999999999999999999999999999

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=6.1e-33  Score=240.64  Aligned_cols=186  Identities=15%  Similarity=0.192  Sum_probs=149.2

Q ss_pred             Cchhhhcch-----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL-----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~-----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.+.     .|+||||+++|+|. +++....  ..+++..+..++.|++.||.|||++||+||||||    ++.+
T Consensus        88 iv~~~~~~~~~~~~~~~v~e~~~~~~L~-~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~  164 (298)
T 3f66_A           88 VLSLLGICLRSEGSPLVVLPYMKHGDLR-NFIRNET--HNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK  164 (298)
T ss_dssp             BCCCCEEECCSSSCCEEEEECCTTCBHH-HHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred             EeeeeeEEEcCCCceEEEEeCCCCCCHH-HHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCC
Confidence            467777643     58999999999999 7776533  2688999999999999999999999999999999    8889


Q ss_pred             CCEEEeccccccccccccc----cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHH
Q psy3574          72 GDVKLADFGVSAQITATIN----KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRA  146 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~  146 (302)
                      +.+||+|||+++.......    ......+|+.|+|||.+.   +..++.++|||||||++|+|++ |.+||.+......
T Consensus       165 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~  241 (298)
T 3f66_A          165 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ---TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI  241 (298)
T ss_dssp             CCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH
T ss_pred             CCEEECcccccccccccchhccccccCCCCCccccChHHhc---CCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH
Confidence            9999999999986654321    123345788999999995   6678999999999999999999 6677776666665


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         147 LFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       147 ~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ...+.......    .+..++..+.++|.+||..||.+||++.++++.+.
T Consensus       242 ~~~~~~~~~~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~  287 (298)
T 3f66_A          242 TVYLLQGRRLL----QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS  287 (298)
T ss_dssp             HHHHHTTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHhcCCCCC----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            55555543222    23567899999999999999999999999998553

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=2.3e-33  Score=246.63  Aligned_cols=187  Identities=18%  Similarity=0.173  Sum_probs=151.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc-------------ccccccccchhHHHhhHHHHHHHHHhCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI-------------TAIELAELQPPMFDLHPMRALFLMSKSGFKPP   63 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hr   63 (302)
                      ||++++.+.    .|+||||+++|+|. +++....             ....+++..++.++.||+.||.|||++||+||
T Consensus        88 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~  166 (327)
T 1fvr_A           88 IINLLGACEHRGYLYLAIEYAPHGNLL-DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHR  166 (327)
T ss_dssp             BCCEEEEEEETTEEEEEECCCTTCBHH-HHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             hhhhceeeeeCCceEEEEecCCCCCHH-HHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCC
Confidence            466777655    58999999999999 7776542             12368999999999999999999999999999


Q ss_pred             CCcC----CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCC
Q psy3574          64 ALKD----KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPM  138 (302)
Q Consensus        64 dlkp----~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf  138 (302)
                      ||||    ++.++.+||+|||+++..... .......+++.|+|||++.   ...++.++|||||||++|+|++ |..||
T Consensus       167 dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~ellt~g~~pf  242 (327)
T 1fvr_A          167 DLAARNILVGENYVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLN---YSVYTTNSDVWSYGVLLWEIVSLGGTPY  242 (327)
T ss_dssp             CCSGGGEEECGGGCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHH---HCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CCccceEEEcCCCeEEEcccCcCcccccc-ccccCCCCCccccChhhhc---cccCCchhcchHHHHHHHHHHcCCCCCC
Confidence            9999    888899999999998754432 2223345788999999985   5568899999999999999998 99999


Q ss_pred             CCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         139 FDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       139 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .+.........+......    ..+..++..+.+||.+||..||.+|||+.++++.+.
T Consensus       243 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~  296 (327)
T 1fvr_A          243 CGMTCAELYEKLPQGYRL----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN  296 (327)
T ss_dssp             TTCCHHHHHHHGGGTCCC----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCcHHHHHHHhhcCCCC----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            988877776666543211    224567999999999999999999999999999664

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=3.8e-33  Score=240.95  Aligned_cols=186  Identities=18%  Similarity=0.223  Sum_probs=152.6

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.   .++||||+.+|+|. +++.. ..   .+++..+..++.||+.||.|||++||+||||||    ++.++
T Consensus        83 i~~~~~~~~~~~~~~v~e~~~~~~L~-~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~  158 (291)
T 1u46_A           83 LIRLYGVVLTPPMKMVTELAPLGSLL-DRLRKHQG---HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD  158 (291)
T ss_dssp             BCCEEEEECSSSCEEEEECCTTCBHH-HHHHHHGG---GSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT
T ss_pred             cccEEEEEccCCceeeEecccCCCHH-HHHHhccC---CcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCC
Confidence            466777665   48999999999999 55554 34   699999999999999999999999999999999    77889


Q ss_pred             CEEEeccccccccccccc---cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q psy3574          73 DVKLADFGVSAQITATIN---KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALF  148 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~  148 (302)
                      .+||+|||++........   ......++..|+|||++.   ...++.++||||||+++|+|++ |..||.+.+......
T Consensus       159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~  235 (291)
T 1u46_A          159 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK---TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH  235 (291)
T ss_dssp             EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHH---HCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred             CEEEccccccccccccccchhhhccCCCCceeeCchhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHH
Confidence            999999999987654322   122345778899999985   5567899999999999999999 999999988888777


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .+.......+   .+..++..+.++|.+||..||.+||++.++++.+.
T Consensus       236 ~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  280 (291)
T 1u46_A          236 KIDKEGERLP---RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL  280 (291)
T ss_dssp             HHHTSCCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHccCCCCC---CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence            7766543333   24568999999999999999999999999998554

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-33  Score=242.34  Aligned_cols=187  Identities=15%  Similarity=0.142  Sum_probs=153.6

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++++.+.   .|+||||+++|+|. +++....  ..+++..+..++.||+.||.|||++||+||||+|    ++.++.
T Consensus        72 i~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~  148 (287)
T 1u59_A           72 IVRLIGVCQAEALMLVMEMAGGGPLH-KFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHY  148 (287)
T ss_dssp             BCCEEEEEESSSEEEEEECCTTEEHH-HHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTE
T ss_pred             EeEEEEEecCCCcEEEEEeCCCCCHH-HHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCC
Confidence            456666554   58999999999999 7665432  2699999999999999999999999999999999    778899


Q ss_pred             EEEecccccccccccccc---ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          74 VKLADFGVSAQITATINK---RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      +||+|||++.........   .....+++.|+|||++.   ...++.++|||||||++|+|++ |..||...........
T Consensus       149 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~  225 (287)
T 1u59_A          149 AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN---FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF  225 (287)
T ss_dssp             EEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHH---HCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHH
T ss_pred             EEECcccceeeeccCcceeeccccccccccccCHHHhc---cCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence            999999999876543221   22335688999999985   5568899999999999999998 9999998887777666


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILI  197 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~  197 (302)
                      +......    ..+..++..+.++|.+||..||.+||++.+++++++.
T Consensus       226 i~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  269 (287)
T 1u59_A          226 IEQGKRM----ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  269 (287)
T ss_dssp             HHTTCCC----CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HhcCCcC----CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            6554321    2245789999999999999999999999999997664

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.1e-33  Score=247.60  Aligned_cols=181  Identities=15%  Similarity=0.138  Sum_probs=141.5

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC--CEEEecccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG--DVKLADFGVSA   83 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~--~ikL~DFg~a~   83 (302)
                      .|+||||+ +|+|. +++.... ...+++..+..++.||+.||.|||++||+||||||    ++.++  .+||+|||+++
T Consensus       133 ~~lv~e~~-~~~L~-~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~  209 (352)
T 2jii_A          133 RFLVLPSL-GRSLQ-SALDVSP-KHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAF  209 (352)
T ss_dssp             EEEEEECC-CEEHH-HHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCB
T ss_pred             EEEEecCC-CcCHH-HHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCccee
Confidence            48999999 89999 7777641 12799999999999999999999999999999999    66676  89999999998


Q ss_pred             ccccccc-------cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHhcC
Q psy3574          84 QITATIN-------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH--PMRALFLMSKSG  154 (302)
Q Consensus        84 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~~  154 (302)
                      .......       ......||+.|+|||++.   +..++.++|||||||++|+|++|+.||....  ............
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  286 (352)
T 2jii_A          210 RYCPSGKHVAYVEGSRSPHEGDLEFISMDLHK---GCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFV  286 (352)
T ss_dssp             CSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHT---TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHH
T ss_pred             eccCCCccccccccccccccCCccccCHHHHc---cCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhcc
Confidence            7654321       123447999999999995   5678999999999999999999999997653  222222222111


Q ss_pred             CCCCCC----CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         155 FKPPAL----KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       155 ~~~~~~----~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ..+...    .....++..+.+||.+||..||.+||++.++++.+.
T Consensus       287 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~  332 (352)
T 2jii_A          287 DKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLE  332 (352)
T ss_dssp             HSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred             CChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHH
Confidence            111111    112356899999999999999999999999998543

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=7.9e-33  Score=238.68  Aligned_cols=187  Identities=19%  Similarity=0.185  Sum_probs=152.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. +++.... ...+++..+..++.||+.||.|||++||+||||||    ++.++
T Consensus        71 i~~~~~~~~~~~~~~~v~e~~~~~~L~-~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~  148 (288)
T 3kfa_A           71 LVQLLGVCTREPPFYIITEFMTYGNLL-DYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH  148 (288)
T ss_dssp             BCCEEEEECSSSSEEEEEECCTTEEHH-HHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGG
T ss_pred             EeeEEEEEccCCCEEEEEEcCCCCcHH-HHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCC
Confidence            466666655    48999999999999 7776543 22589999999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||++........ ......+++.|+|||++.   +..++.++||||||+++|+|++ |..||.+.+.......+
T Consensus       149 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~  225 (288)
T 3kfa_A          149 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL  225 (288)
T ss_dssp             CEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH
T ss_pred             CEEEccCccceeccCCccccccCCccccCcCChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            999999999987654322 223345678899999995   6678999999999999999999 99999887766665555


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ......    ..+..++..+.+||.+||..||.+||++.++++.+.
T Consensus       226 ~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~  267 (288)
T 3kfa_A          226 EKDYRM----ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE  267 (288)
T ss_dssp             HTTCCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             hccCCC----CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHH
Confidence            443221    224668999999999999999999999999988654

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=2.4e-33  Score=242.09  Aligned_cols=180  Identities=15%  Similarity=0.178  Sum_probs=141.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++||+|. +++....  ..+++..+..++.||+.||.|||++||+||||||    ++.++
T Consensus        74 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~  150 (289)
T 4fvq_A           74 LVLNYGVCVCGDENILVQEFVKFGSLD-TYLKKNK--NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREE  150 (289)
T ss_dssp             BCCEEEEECCTTCCEEEEECCTTCBHH-HHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECC
T ss_pred             EeEEEEEEEeCCCCEEEEECCCCCCHH-HHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCC
Confidence            567777665    58999999999999 7776654  2499999999999999999999999999999999    55555


Q ss_pred             C--------EEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCC-CCCCCCCh
Q psy3574          73 D--------VKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQ-PPMFDLHP  143 (302)
Q Consensus        73 ~--------ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~-~pf~~~~~  143 (302)
                      .        +||+|||++......    ....|+..|+|||++.+  ...++.++|||||||++|+|++|. +||.....
T Consensus       151 ~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~  224 (289)
T 4fvq_A          151 DRKTGNPPFIKLSDPGISITVLPK----DILQERIPWVPPECIEN--PKNLNLATDKWSFGTTLWEICSGGDKPLSALDS  224 (289)
T ss_dssp             BGGGTBCCEEEECCCCSCTTTSCH----HHHHHTTTTSCHHHHHC--GGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred             cccccccceeeeccCcccccccCc----cccCCcCcccCHHHhCC--CCCCCchhHHHHHHHHHHHHHcCCCCCccccch
Confidence            5        999999998765432    23457889999999862  255899999999999999999955 55555444


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         144 MRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       144 ~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ..... ........     +...+..+.+||.+||..||.+|||+.++++++
T Consensus       225 ~~~~~-~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l  270 (289)
T 4fvq_A          225 QRKLQ-FYEDRHQL-----PAPKAAELANLINNCMDYEPDHRPSFRAIIRDL  270 (289)
T ss_dssp             HHHHH-HHHTTCCC-----CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             HHHHH-HhhccCCC-----CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            44333 33322222     234577899999999999999999999999955

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=2.1e-33  Score=243.15  Aligned_cols=180  Identities=13%  Similarity=0.153  Sum_probs=141.8

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C---CCCCCEEEeccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K---DRCGDVKLADFGVS   82 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~---~~~~~ikL~DFg~a   82 (302)
                      .|+||||+ +++|. +++....  ..+++..+..++.||+.||+|||++||+||||||    +   +.++.+||+|||++
T Consensus        80 ~~lv~e~~-~~~L~-~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~  155 (296)
T 3uzp_A           80 NVMVMELL-GPSLE-DLFNFCS--RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA  155 (296)
T ss_dssp             EEEEEECC-CCBHH-HHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred             eEEEEEec-CCCHH-HHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence            48999999 88999 7776332  2699999999999999999999999999999999    4   58899999999999


Q ss_pred             cccccccc-------cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHh
Q psy3574          83 AQITATIN-------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHP---MRALFLMSK  152 (302)
Q Consensus        83 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~~~~i~~  152 (302)
                      ........       ......||+.|+|||++.   +..++.++|||||||++|+|++|+.||.+...   ......+..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  232 (296)
T 3uzp_A          156 KKYRDARTHQHIPYRENKNLTGTARYASINTHL---GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE  232 (296)
T ss_dssp             EECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHT---TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHH
T ss_pred             ccccccccccccccccccccccccccCChhhhc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcc
Confidence            87655322       124557999999999996   66689999999999999999999999976322   122222222


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .....+.......++..+.++|.+||..||.+||++.++++.+.
T Consensus       233 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~  276 (296)
T 3uzp_A          233 KKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR  276 (296)
T ss_dssp             HHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred             cccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHH
Confidence            21122211123557899999999999999999999999988554

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=1.4e-33  Score=244.80  Aligned_cols=190  Identities=19%  Similarity=0.256  Sum_probs=143.6

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHH--------hCCCCCCC
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS--------KSGFKPPA   64 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH--------~~~i~Hrd   64 (302)
                      ||++++.+.        .|+||||+++|+|. ++++..    .+++..+..++.||+.||+|||        ++||+|||
T Consensus        64 iv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~D  138 (301)
T 3q4u_A           64 ILGFIASDMTSRHSSTQLWLITHYHEMGSLY-DYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRD  138 (301)
T ss_dssp             BCCEEEEEEEEETTEEEEEEEECCCTTCBHH-HHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSC
T ss_pred             eeeEEEeeccccCCCceeEEehhhccCCCHH-HHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCC
Confidence            456666532        58999999999999 777543    5999999999999999999999        99999999


Q ss_pred             CcC----CCCCCCEEEecccccccccccccc----ccccccCcccchhhcccccccC---CCCchhhHHHHHHHHHHHHh
Q psy3574          65 LKD----KDRCGDVKLADFGVSAQITATINK----RKSFIGTPYWMAPEVAAVERKG---GYNQQCDIWAVGITAIELAE  133 (302)
Q Consensus        65 lkp----~~~~~~ikL~DFg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~---~~~~~~DiwslG~il~ell~  133 (302)
                      |||    ++.++.+||+|||+++........    .....||+.|+|||++.+....   .++.++|||||||++|+|++
T Consensus       139 lkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~t  218 (301)
T 3q4u_A          139 LKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR  218 (301)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHh
Confidence            999    888999999999999765543222    2334799999999999622110   34578999999999999999


Q ss_pred             C----------CCCCCCC----ChHHHHHHHHhcCCCCCCCC---CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         134 L----------QPPMFDL----HPMRALFLMSKSGFKPPALK---DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       134 g----------~~pf~~~----~~~~~~~~i~~~~~~~~~~~---~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      |          ..||...    ................+...   ....++..+.+||.+||..||.+|||+.++++.+
T Consensus       219 g~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L  297 (301)
T 3q4u_A          219 RMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL  297 (301)
T ss_dssp             TBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHH
T ss_pred             hhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHH
Confidence            9          8888543    22233333332222222211   1233567899999999999999999999999844

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=5.4e-33  Score=242.50  Aligned_cols=187  Identities=17%  Similarity=0.134  Sum_probs=141.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+++++.+.    .|+||||++|++|. +++....   .+++..+..++.||+.||.|||++||+||||+|    ++.++
T Consensus        96 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~  171 (309)
T 2h34_A           96 VVPIHDFGEIDGQLYVDMRLINGVDLA-AMLRRQG---PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADD  171 (309)
T ss_dssp             BCCEEEEEEETTEEEEEEECCCCEEHH-HHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             eeEEEEEEeeCCeEEEEEEecCCCCHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCC
Confidence            466776655    48999999999999 7887766   799999999999999999999999999999999    77889


Q ss_pred             CEEEecccccccccccc-ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATI-NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      .+||+|||++....... .......|++.|+|||++.   +..++.++||||||+++|+|++|+.||.+.........+.
T Consensus       172 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  248 (309)
T 2h34_A          172 FAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFS---ESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHIN  248 (309)
T ss_dssp             CEEECSCCC----------------CCGGGCCGGGTC---C----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHH
T ss_pred             CEEEecCccCccccccccccccccCCCcCccCHHHHc---CCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhc
Confidence            99999999987665432 1223457899999999986   5668899999999999999999999998776554333333


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-CHHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-TADKLLQVIL  196 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-t~~~ll~~l~  196 (302)
                       .... .....+..++..+.++|.+||..||++|| +++++++.+.
T Consensus       249 -~~~~-~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~  292 (309)
T 2h34_A          249 -QAIP-RPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAH  292 (309)
T ss_dssp             -SCCC-CGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             -cCCC-CccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence             2222 22233466899999999999999999999 8999988553

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=9.3e-34  Score=261.19  Aligned_cols=200  Identities=13%  Similarity=0.097  Sum_probs=153.1

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C---CCCCCEEEeccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K---DRCGDVKLADFGVS   82 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~---~~~~~ikL~DFg~a   82 (302)
                      .||||||+ +++|. +++....  ..+++..++.++.||+.||.|||++||+||||||    +   +..+.+||+|||++
T Consensus        78 ~~lvme~~-g~sL~-~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla  153 (483)
T 3sv0_A           78 NVLVMDLL-GPSLE-DLFNFCS--RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA  153 (483)
T ss_dssp             EEEEEECC-CCBHH-HHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred             EEEEEECC-CCCHH-HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcc
Confidence            48999999 88999 7776432  2699999999999999999999999999999999    4   58899999999999


Q ss_pred             ccccccccc-------ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHh
Q psy3574          83 AQITATINK-------RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHP---MRALFLMSK  152 (302)
Q Consensus        83 ~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~~~~i~~  152 (302)
                      +........       ....+||..|+|||++.   +..++.++|||||||++|+|++|+.||.+...   ...+..+..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~  230 (483)
T 3sv0_A          154 KKYRDTSTHQHIPYRENKNLTGTARYASVNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE  230 (483)
T ss_dssp             EECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHT---TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHH
T ss_pred             eeccCCccccccccccccccCCCccccCHHHhc---CCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhh
Confidence            876653221       22567999999999996   66789999999999999999999999986443   333333322


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVA  232 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~~~  232 (302)
                      .............++.++.+||.+||..+|++||++.+|++.+.....                ...++|+...+|....
T Consensus       231 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~----------------~~~~~~~~~~dW~~~~  294 (483)
T 3sv0_A          231 KKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI----------------REGFQFDYVFDWTILK  294 (483)
T ss_dssp             HHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH----------------HTTCCCSSCCHHHHHT
T ss_pred             ccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH----------------HcCCCccCCcCchhhc
Confidence            221111111224578999999999999999999999999885432211                1227888777766443

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=3.6e-33  Score=245.92  Aligned_cols=190  Identities=14%  Similarity=0.177  Sum_probs=152.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-----------cccccccchhHHHhhHHHHHHHHHhCCCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-----------AIELAELQPPMFDLHPMRALFLMSKSGFKPPAL   65 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdl   65 (302)
                      ||++++.+.    .|+||||+++|+|. +++.....           ...+++..+..++.||+.||.|||++||+||||
T Consensus       112 iv~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dl  190 (333)
T 2i1m_A          112 IVNLLGACTHGGPVLVITEYCCYGDLL-NFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDV  190 (333)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTEEHH-HHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             eeeEEEEEecCCceEEEEecCCCCcHH-HHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCc
Confidence            567777665    58999999999999 77665321           124788999999999999999999999999999


Q ss_pred             cC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCC
Q psy3574          66 KD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPM  138 (302)
Q Consensus        66 kp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf  138 (302)
                      ||    ++.++.+||+|||++........  ......+++.|+|||++.   +..++.++|||||||++|+|++ |..||
T Consensus       191 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~el~t~g~~p~  267 (333)
T 2i1m_A          191 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF---DCVYTVQSDVWSYGILLWEIFSLGLNPY  267 (333)
T ss_dssp             SGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHH---HCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred             ccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhc---cCCCChHHHHHHHHHHHHHHHcCCCCCC
Confidence            99    77889999999999986654322  122345678999999985   5678999999999999999998 99999


Q ss_pred             CCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q psy3574         139 FDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILI  197 (302)
Q Consensus       139 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~  197 (302)
                      .+.........+........   .+..++..+.++|.+||..||.+|||+.++++.+..
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  323 (333)
T 2i1m_A          268 PGILVNSKFYKLVKDGYQMA---QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE  323 (333)
T ss_dssp             TTCCSSHHHHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             cccchhHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHH
Confidence            87765555555555443322   235578999999999999999999999999986643

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=4.4e-33  Score=264.22  Aligned_cols=185  Identities=15%  Similarity=0.149  Sum_probs=150.4

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++++.+.   .|+|||||.+|+|. +++....  ..+++..+..++.||+.||+|||++||+||||||    ++.++.
T Consensus       398 iv~l~~~~~~~~~~lv~E~~~~g~L~-~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~  474 (613)
T 2ozo_A          398 IVRLIGVCQAEALMLVMEMAGGGPLH-KFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHY  474 (613)
T ss_dssp             BCCEEEEEESSSEEEEEECCTTCBHH-HHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE
T ss_pred             EeeEEEEeccCCeEEEEEeCCCCcHH-HHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCc
Confidence            577777665   58999999999999 6665432  2699999999999999999999999999999999    778899


Q ss_pred             EEEecccccccccccccc---ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          74 VKLADFGVSAQITATINK---RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      +||+|||+++........   .....+++.|+|||++.   ...++.++|||||||++|||++ |..||.+.+..+....
T Consensus       475 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~---~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~  551 (613)
T 2ozo_A          475 AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN---FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF  551 (613)
T ss_dssp             EEECCCSTTTTCC--------------CCTTSCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHH
T ss_pred             EEEeeccCcccccCCCceeeeccCCCCccceeCHhhhc---CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Confidence            999999999876543211   12234568899999995   6679999999999999999998 9999999888887777


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      +......    ..+..++..+.++|.+||..||.+||++.++++.+
T Consensus       552 i~~~~~~----~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L  593 (613)
T 2ozo_A          552 IEQGKRM----ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM  593 (613)
T ss_dssp             HHTTCCC----CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHH
T ss_pred             HHcCCCC----CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            6654322    22466899999999999999999999999998744

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=2.5e-33  Score=242.51  Aligned_cols=180  Identities=13%  Similarity=0.155  Sum_probs=141.8

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C---CCCCCEEEeccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K---DRCGDVKLADFGVS   82 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~---~~~~~ikL~DFg~a   82 (302)
                      .|+||||+ +|+|. +++....  ..+++..+..++.||+.||.|||++||+||||||    +   +.++.+||+|||++
T Consensus        80 ~~lv~e~~-~~~L~-~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a  155 (296)
T 4hgt_A           80 NVMVMELL-GPSLE-DLFNFCS--RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA  155 (296)
T ss_dssp             EEEEEECC-CCBHH-HHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred             eEEEEEcc-CCCHH-HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence            48999999 88999 7776432  2699999999999999999999999999999999    4   78899999999999


Q ss_pred             cccccccc-------cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHh
Q psy3574          83 AQITATIN-------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM---RALFLMSK  152 (302)
Q Consensus        83 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~i~~  152 (302)
                      ........       ......||+.|+|||++.   +..++.++|||||||++|+|++|+.||.+....   .....+..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  232 (296)
T 4hgt_A          156 KKYRDARTHQHIPYRENKNLTGTARYASINTHL---GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE  232 (296)
T ss_dssp             EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHT---TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHH
T ss_pred             eeccCcccCccCCCCcccccCCCccccchHHhc---CCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhc
Confidence            87654322       123457899999999996   666899999999999999999999999764321   22222222


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .....+.......++..+.++|.+||..||.+|||+.++++.+.
T Consensus       233 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (296)
T 4hgt_A          233 KKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR  276 (296)
T ss_dssp             HHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred             ccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence            21122211223557899999999999999999999999988543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=1.7e-32  Score=239.18  Aligned_cols=192  Identities=22%  Similarity=0.353  Sum_probs=140.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhc-cccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      |+++++.+.    .|+||||+++|+|. +++... .....+++..+..++.||+.||.|||++|++||||+|    ++.+
T Consensus        94 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~  172 (310)
T 2wqm_A           94 VIKYYASFIEDNELNIVLELADAGDLS-RMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT  172 (310)
T ss_dssp             BCCEEEEEEETTEEEEEEECCCSCBHH-HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             EeeEEEEEEcCCcEEEEEecCCCCCHH-HHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCC
Confidence            466776655    58999999999999 766542 1123689999999999999999999999999999999    7889


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH--PMRALFL  149 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~  149 (302)
                      +.+||+|||++..............|++.|+|||++.   ...++.++|||||||++|+|++|..||.+..  .......
T Consensus       173 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~  249 (310)
T 2wqm_A          173 GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK  249 (310)
T ss_dssp             SCEEECCC------------------CCSSCCHHHHT---TCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHH
T ss_pred             CCEEEEeccceeeecCCCccccccCCCeeEeChHHhC---CCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHH
Confidence            9999999999987655433344567899999999985   6678999999999999999999999997543  3333334


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHh
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHR  199 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~  199 (302)
                      +........   ....++.++.++|.+||..||.+||++.++++.+....
T Consensus       250 ~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~  296 (310)
T 2wqm_A          250 IEQCDYPPL---PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH  296 (310)
T ss_dssp             HHTTCSCCC---CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhcccCCCC---cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            443332211   12567899999999999999999999999999665443

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=9e-33  Score=237.32  Aligned_cols=184  Identities=16%  Similarity=0.153  Sum_probs=144.9

Q ss_pred             Cchhhhcc-----hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHF-----LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~-----~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.+     ..|+||||+++|+|. +++.... ...+++..+..++.|++.||.|||++|++||||||    ++.+
T Consensus        76 iv~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~  153 (278)
T 1byg_A           76 LVQLLGVIVEEKGGLYIVTEYMAKGSLV-DYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED  153 (278)
T ss_dssp             BCCEEEEECCC--CCEEEECCCTTEEHH-HHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred             EeeEEEEEEcCCCceEEEEecCCCCCHH-HHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCC
Confidence            46666654     358999999999999 7776543 12488999999999999999999999999999999    7888


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      +.+||+|||++......   .....++..|+|||++.   +..++.++||||||+++|+|++ |..||...........+
T Consensus       154 ~~~~l~Dfg~~~~~~~~---~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~  227 (278)
T 1byg_A          154 NVAKVSDFGLTKEASST---QDTGKLPVKWTAPEALR---EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV  227 (278)
T ss_dssp             SCEEECCCCC---------------CCTTTSCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH
T ss_pred             CcEEEeecccccccccc---ccCCCccccccCHHHhC---CCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            99999999998765432   22335788999999985   6678999999999999999998 99999887766665555


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .....    ...+..+++.+.++|.+||..||.+||++.++++.+.
T Consensus       228 ~~~~~----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~  269 (278)
T 1byg_A          228 EKGYK----MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE  269 (278)
T ss_dssp             TTTCC----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             hcCCC----CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHH
Confidence            44321    1224668999999999999999999999999998554

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=5.4e-33  Score=257.59  Aligned_cols=186  Identities=19%  Similarity=0.199  Sum_probs=152.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .||||||+++|+|. +++.... ...+++..+..++.||+.||+|||++||+||||||    ++.++
T Consensus       278 iv~l~~~~~~~~~~~lv~E~~~~g~L~-~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~  355 (495)
T 1opk_A          278 LVQLLGVCTREPPFYIITEFMTYGNLL-DYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENH  355 (495)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHH-HHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred             EeeEEEEEecCCcEEEEEEccCCCCHH-HHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCC
Confidence            577777765    58999999999999 7776532 12588999999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||+++....... ......++..|+|||++.   ...++.++|||||||++|+|++ |..||.+.+.......+
T Consensus       356 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~  432 (495)
T 1opk_A          356 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL  432 (495)
T ss_dssp             CEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHH---HCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH
T ss_pred             cEEEeecccceeccCCceeecCCCcCCcceeCHhHHh---cCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            999999999987654321 122334678899999995   5668999999999999999999 99999888776665555


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .... ..   ..+..++..+.+||.+||..||.+|||+.++++.+
T Consensus       433 ~~~~-~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L  473 (495)
T 1opk_A          433 EKDY-RM---ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF  473 (495)
T ss_dssp             HTTC-CC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HcCC-CC---CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHH
Confidence            4432 21   23467899999999999999999999999998854

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-32  Score=238.17  Aligned_cols=186  Identities=16%  Similarity=0.214  Sum_probs=149.4

Q ss_pred             Cchhhhcch-----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL-----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~-----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.+.     .|+||||+.+|+|. +++....  ..+++..+..++.|++.||+|||++||+||||||    ++.+
T Consensus        84 iv~~~~~~~~~~~~~~~v~e~~~~~~L~-~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~  160 (298)
T 3pls_A           84 VLALIGIMLPPEGLPHVLLPYMCHGDLL-QFIRSPQ--RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDES  160 (298)
T ss_dssp             BCCCCEEECCSSSCCEEEECCCTTCBHH-HHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred             eeeEEEEEecCCCCcEEEEecccCCCHH-HHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC
Confidence            567777665     38999999999999 7776532  2688999999999999999999999999999999    8888


Q ss_pred             CCEEEecccccccccccc----ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCChHHH
Q psy3574          72 GDVKLADFGVSAQITATI----NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAEL-QPPMFDLHPMRA  146 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~~~~~  146 (302)
                      +.+||+|||+++......    .......+++.|+|||.+.   +..++.++|||||||++|+|++| .+||...+....
T Consensus       161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~  237 (298)
T 3pls_A          161 FTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQ---TYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL  237 (298)
T ss_dssp             CCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHT---TCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGH
T ss_pred             CcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhc---cCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHH
Confidence            999999999998654421    1223446788999999995   66789999999999999999995 555555555555


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         147 LFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       147 ~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ...+......    ..+..++..+.++|.+||..||.+|||+.++++.+.
T Consensus       238 ~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~  283 (298)
T 3pls_A          238 THFLAQGRRL----PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVE  283 (298)
T ss_dssp             HHHHHTTCCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHhhcCCCC----CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            5555544322    224567899999999999999999999999998543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=5.4e-33  Score=254.87  Aligned_cols=186  Identities=18%  Similarity=0.194  Sum_probs=147.7

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++|+.+.   .|+||||+++|+|. +++.... +..+++..+..++.||+.||+|||++||+||||||    ++.++.
T Consensus       241 iv~~~~~~~~~~~~iv~e~~~~gsL~-~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~  318 (452)
T 1fmk_A          241 LVQLYAVVSEEPIYIVTEYMSKGSLL-DFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV  318 (452)
T ss_dssp             BCCEEEEECSSSCEEEECCCTTCBHH-HHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC
T ss_pred             EeeEEEEEcCCceEEEehhhcCCCHH-HHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCC
Confidence            466666554   58999999999999 7775431 12589999999999999999999999999999999    788899


Q ss_pred             EEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||+++....... ......++..|+|||++.   ...++.++|||||||++|+|++ |..||.+....+....+.
T Consensus       319 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~  395 (452)
T 1fmk_A          319 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL---YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE  395 (452)
T ss_dssp             EEECCCCTTC--------------CCGGGSCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred             EEECCCccceecCCCceecccCCcccccccCHhHHh---cCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            99999999987654321 122335678899999985   5678999999999999999999 999999988887776665


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .... .   ..+..++..+.++|.+||..||++|||+.++++.+
T Consensus       396 ~~~~-~---~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L  435 (452)
T 1fmk_A          396 RGYR-M---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL  435 (452)
T ss_dssp             TTCC-C---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             cCCC-C---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            5432 2   22456899999999999999999999999998844

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=2.9e-33  Score=246.73  Aligned_cols=183  Identities=16%  Similarity=0.169  Sum_probs=136.2

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC---------CCCCCCCcC----CCCCCCEEE
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS---------GFKPPALKD----KDRCGDVKL   76 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---------~i~Hrdlkp----~~~~~~ikL   76 (302)
                      +|+||||+++|+|. +++....    +++..+..++.||+.||.|||++         ||+||||||    ++.++.+||
T Consensus        87 ~~lv~e~~~~g~L~-~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL  161 (336)
T 3g2f_A           87 YLLVMEYYPNGSLX-KYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI  161 (336)
T ss_dssp             EEEEECCCTTCBHH-HHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred             EEEEEecCCCCcHH-HHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence            48999999999999 8887655    68889999999999999999999         999999999    888899999


Q ss_pred             ecccccccccccc--------ccccccccCcccchhhcccccc----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--
Q psy3574          77 ADFGVSAQITATI--------NKRKSFIGTPYWMAPEVAAVER----KGGYNQQCDIWAVGITAIELAELQPPMFDLH--  142 (302)
Q Consensus        77 ~DFg~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~----~~~~~~~~DiwslG~il~ell~g~~pf~~~~--  142 (302)
                      +|||+++......        ......+||+.|+|||++.+..    ...++.++|||||||++|+|++|..||....  
T Consensus       162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~  241 (336)
T 3g2f_A          162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV  241 (336)
T ss_dssp             CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred             eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence            9999998764321        1223457999999999986310    1345678999999999999999977764321  


Q ss_pred             ---------------hHHHHHHHHhcCCCCCCCC----CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q psy3574         143 ---------------PMRALFLMSKSGFKPPALK----DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILI  197 (302)
Q Consensus       143 ---------------~~~~~~~i~~~~~~~~~~~----~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~  197 (302)
                                     ...............+...    ....+++.+.+||.+||..||++|||+.++++.+-.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~  315 (336)
T 3g2f_A          242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE  315 (336)
T ss_dssp             CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence                           1111122222211111111    112245689999999999999999999999885543

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=9e-33  Score=237.33  Aligned_cols=187  Identities=17%  Similarity=0.237  Sum_probs=151.9

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      |+++++.+.   .|+||||+++|+|. +++.... +..+++..+..++.|++.||+|||++||+||||||    ++.++.
T Consensus        70 i~~~~~~~~~~~~~~v~e~~~~~~L~-~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~  147 (279)
T 1qpc_A           70 LVRLYAVVTQEPIYIITEYMENGSLV-DFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS  147 (279)
T ss_dssp             BCCEEEEECSSSCEEEEECCTTCBHH-HHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC
T ss_pred             cceEEEEEcCCCcEEEEecCCCCCHH-HHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCC
Confidence            456666544   58999999999999 7775432 22589999999999999999999999999999999    888899


Q ss_pred             EEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||++........ ......++..|+|||++.   ...++.++|||||||++|+|++ |..||.+.........+.
T Consensus       148 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~  224 (279)
T 1qpc_A          148 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE  224 (279)
T ss_dssp             EEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHH---HCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred             EEECCCcccccccCcccccccCCCCccCccChhhhc---cCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHh
Confidence            99999999987654321 122345678899999985   5668899999999999999999 999999888777666665


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .....    ..+..++..+.++|.+||..||++|||+.++++.+.
T Consensus       225 ~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  265 (279)
T 1qpc_A          225 RGYRM----VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE  265 (279)
T ss_dssp             TTCCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cccCC----CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence            43211    224567999999999999999999999999988553

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=6.3e-33  Score=238.58  Aligned_cols=176  Identities=17%  Similarity=0.245  Sum_probs=143.4

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      +|+||||+++|+|. +++.... ...+++..+..++.||+.||.|||++||+||||||    ++.++.+||+|||++...
T Consensus        95 ~~lv~e~~~~~~L~-~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  172 (284)
T 2a19_B           95 LFIQMEFCDKGTLE-QWIEKRR-GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL  172 (284)
T ss_dssp             EEEEECCCCSCBHH-HHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEES
T ss_pred             EEEEEeccCCCCHH-HHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheec
Confidence            58999999999999 7776542 23689999999999999999999999999999999    778899999999999876


Q ss_pred             ccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCC
Q psy3574          86 TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDR  165 (302)
Q Consensus        86 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  165 (302)
                      ... .......|++.|+|||++.   +..++.++|||||||++|+|++|..|+...  ......+....       .+..
T Consensus       173 ~~~-~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~~~~-------~~~~  239 (284)
T 2a19_B          173 KND-GKRTRSKGTLRYMSPEQIS---SQDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLRDGI-------ISDI  239 (284)
T ss_dssp             SCC-SCCCCCCSCCTTSCHHHHH---CSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHHTTC-------CCTT
T ss_pred             ccc-ccccccCCcccccChhhhc---cCCCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhhccc-------cccc
Confidence            554 2334457899999999985   667899999999999999999999887432  11222222211       1245


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhH
Q psy3574         166 WSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRA  200 (302)
Q Consensus       166 ~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~  200 (302)
                      ++..+.++|.+||..||.+||++.+++++++....
T Consensus       240 ~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          240 FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence            78999999999999999999999999997775543

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=6e-33  Score=244.57  Aligned_cols=179  Identities=17%  Similarity=0.227  Sum_probs=136.3

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC--------CCCCCCCcC----CCCCCCEEEe
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS--------GFKPPALKD----KDRCGDVKLA   77 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~--------~i~Hrdlkp----~~~~~~ikL~   77 (302)
                      .|+||||+++|+|. ++++..    .+++..+..++.|++.||.|||++        ||+||||||    ++.++.+||+
T Consensus       110 ~~lv~e~~~~g~L~-~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~  184 (337)
T 3mdy_A          110 LYLITDYHENGSLY-DYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA  184 (337)
T ss_dssp             EEEEECCCTTCBHH-HHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred             eEEEEeccCCCcHH-HHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence            58999999999999 777654    499999999999999999999999        999999999    8889999999


Q ss_pred             cccccccccccccc----ccccccCcccchhhcccccccCCCCc------hhhHHHHHHHHHHHHhC----------CCC
Q psy3574          78 DFGVSAQITATINK----RKSFIGTPYWMAPEVAAVERKGGYNQ------QCDIWAVGITAIELAEL----------QPP  137 (302)
Q Consensus        78 DFg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~------~~DiwslG~il~ell~g----------~~p  137 (302)
                      |||++.........    ....+||+.|+|||++.   +..+..      ++|||||||++|+|++|          ..|
T Consensus       185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p  261 (337)
T 3mdy_A          185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD---ESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP  261 (337)
T ss_dssp             CCTTCEECC---------CCSSCSCGGGCCHHHHT---TCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred             eCCCceeeccccccccCCCCCCccCcceeChhhcc---cccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence            99999766543222    12457999999999996   333333      49999999999999999          777


Q ss_pred             CCCC----ChHHHHHHHHhcCCCCCCCC---CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         138 MFDL----HPMRALFLMSKSGFKPPALK---DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       138 f~~~----~~~~~~~~i~~~~~~~~~~~---~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      |...    ................+...   ....++..+.++|.+||..||.+|||+.++++++.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  327 (337)
T 3mdy_A          262 YHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA  327 (337)
T ss_dssp             TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             HhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHH
Confidence            7543    12222222222221112111   12345678999999999999999999999999664

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.98  E-value=1.3e-32  Score=257.36  Aligned_cols=186  Identities=18%  Similarity=0.194  Sum_probs=152.7

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++|+.+.   .||||||+.+|+|. +++.... +..+++.++..++.||+.||+|||++||+||||||    ++.++.
T Consensus       324 iv~~~~~~~~~~~~lv~e~~~~gsL~-~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~  401 (535)
T 2h8h_A          324 LVQLYAVVSEEPIYIVTEYMSKGSLL-DFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV  401 (535)
T ss_dssp             BCCEEEEECSSSCEEEECCCTTEEHH-HHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC
T ss_pred             EeeEEEEEeeccceEeeehhcCCcHH-HHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCc
Confidence            567776554   58999999999999 7775431 12589999999999999999999999999999999    788899


Q ss_pred             EEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||+++....... ......++..|+|||++.   ...++.++|||||||++|+|++ |..||.+....+....+.
T Consensus       402 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~  478 (535)
T 2h8h_A          402 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL---YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE  478 (535)
T ss_dssp             EEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHH---HCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHH
T ss_pred             EEEcccccceecCCCceecccCCcCcccccCHHHhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            99999999987654211 122345678899999986   5678999999999999999999 999999988887776665


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .... .   ..+..++..+.+||.+||..||++|||+.++++.|
T Consensus       479 ~~~~-~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L  518 (535)
T 2h8h_A          479 RGYR-M---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL  518 (535)
T ss_dssp             TTCC-C---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             cCCC-C---CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            5432 1   22456899999999999999999999999998844

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.98  E-value=2.9e-33  Score=252.55  Aligned_cols=194  Identities=14%  Similarity=0.150  Sum_probs=149.0

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C--
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K--   68 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~--   68 (302)
                      ||++++.+.      .|+|||||+||+|. +++........+++..++.++.||+.||+|||++||+||||||    +  
T Consensus        69 Iv~~~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  147 (396)
T 4eut_A           69 IVKLFAIEEETTTRHKVLIMEFCPCGSLY-TVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVI  147 (396)
T ss_dssp             BCCEEEEEECTTTCCEEEEECCCTTEEHH-HHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE
T ss_pred             CCeEEEeeccCCCCeeEEEEecCCCCCHH-HHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEee
Confidence            567776553      48999999999999 7877655333499999999999999999999999999999999    3  


Q ss_pred             --CCCCCEEEeccccccccccccccccccccCcccchhhcccccc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCC-
Q psy3574          69 --DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVER-----KGGYNQQCDIWAVGITAIELAELQPPMFD-  140 (302)
Q Consensus        69 --~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~DiwslG~il~ell~g~~pf~~-  140 (302)
                        +..+.+||+|||+++..... ......+||+.|+|||++....     ...++.++|||||||++|+|++|+.||.. 
T Consensus       148 ~~~~~~~~kL~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~  226 (396)
T 4eut_A          148 GEDGQSVYKLTDFGAARELEDD-EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF  226 (396)
T ss_dssp             CTTSCEEEEECCGGGCEECCCG-GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECT
T ss_pred             cCCCceeEEEecCCCceEccCC-CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence              67778999999999876654 3334567999999999985210     13467899999999999999999999964 


Q ss_pred             ---CChHHHHHHHHhcCCCC--------------------CCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         141 ---LHPMRALFLMSKSGFKP--------------------PALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       141 ---~~~~~~~~~i~~~~~~~--------------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                         .........+.......                    ........++..+.++|.+||..||++||++.++++.+.
T Consensus       227 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~  305 (396)
T 4eut_A          227 EGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (396)
T ss_dssp             TCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             CcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence               23344555555432110                    000111234567899999999999999999999988653

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.98  E-value=1.5e-32  Score=241.31  Aligned_cols=192  Identities=16%  Similarity=0.148  Sum_probs=144.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc-ccccccccchhHHHhhHHHHHHHHHhC---CCCCCCCcC----C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI-TAIELAELQPPMFDLHPMRALFLMSKS---GFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~---~i~Hrdlkp----~   68 (302)
                      ||++++.+.    .|+||||+.+|+|. +++.... ...++++..+..++.|++.||+|||++   ||+||||||    +
T Consensus        89 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~  167 (326)
T 3uim_A           89 LLRLRGFCMTPTERLLVYPYMANGSVA-SCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL  167 (326)
T ss_dssp             BCCCCEEECCSSCCEEEEECCTTCBHH-HHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE
T ss_pred             ccceEEEEecCCceEEEEEeccCCCHH-HHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE
Confidence            467777665    48999999999999 7776543 223489999999999999999999999   999999999    8


Q ss_pred             CCCCCEEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC----Ch
Q psy3574          69 DRCGDVKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL----HP  143 (302)
Q Consensus        69 ~~~~~ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~----~~  143 (302)
                      +.++.+||+|||++........ ......||+.|+|||++.   +..++.++|||||||++|+|++|..||...    ..
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  244 (326)
T 3uim_A          168 DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD  244 (326)
T ss_dssp             CTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHH---HSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTS
T ss_pred             CCCCCEEeccCccccccCcccccccccccCCcCccCHHHhc---cCCCCccccchhHHHHHHHHHhCCCccccccccccc
Confidence            8889999999999987654322 233456999999999985   556899999999999999999999999521    00


Q ss_pred             HHHHHHHHhcCCCCCCC----------CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         144 MRALFLMSKSGFKPPAL----------KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       144 ~~~~~~i~~~~~~~~~~----------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .................          ......+..+.+++.+||..||.+|||+.+++++|.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          245 DVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             CSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             chhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence            00011111111000000          011123477999999999999999999999999664

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.98  E-value=8.5e-33  Score=243.05  Aligned_cols=187  Identities=16%  Similarity=0.220  Sum_probs=147.1

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      ||++++.+.      .|+||||++||+|. +++....  ..+++..+..++.||+.||+|||++||+||||||    ++.
T Consensus        86 i~~~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~  162 (327)
T 3lxl_A           86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLR-DFLQRHR--ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES  162 (327)
T ss_dssp             BCCEEEEEECSSSCEEEEEEECCTTCBHH-HHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE
T ss_pred             eeEEEEEEecCCCceEEEEEeecCCCCHH-HHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECC
Confidence            466666553      58999999999999 7776532  1699999999999999999999999999999999    778


Q ss_pred             CCCEEEeccccccccccccc---cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH---
Q psy3574          71 CGDVKLADFGVSAQITATIN---KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM---  144 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---  144 (302)
                      ++.+||+|||++........   ......|+..|+|||++.   +..++.++|||||||++|+|++|..||......   
T Consensus       163 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~  239 (327)
T 3lxl_A          163 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS---DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLR  239 (327)
T ss_dssp             TTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHH---HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH
T ss_pred             CCCEEEcccccceecccCCccceeeccCCccccccCHHHhc---cCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhh
Confidence            89999999999987654322   223345788899999985   556889999999999999999999998643321   


Q ss_pred             -----------HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         145 -----------RALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       145 -----------~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                                 .............   ..+..++..+.+||.+||..||.+|||+.++++.+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  299 (327)
T 3lxl_A          240 MMGCERDVPALSRLLELLEEGQRL---PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLD  299 (327)
T ss_dssp             HCC----CCHHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             hcccccccccHHHHHHHhhcccCC---CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence                       1222222222222   224668999999999999999999999999988553

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.98  E-value=2.3e-32  Score=239.21  Aligned_cols=189  Identities=16%  Similarity=0.158  Sum_probs=147.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||++|++|. +++....  ..+++..+..++.||+.||+|||++||+||||||    ++ ++
T Consensus        91 iv~~~~~~~~~~~~~iv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~  166 (319)
T 2y4i_B           91 VVLFMGACMSPPHLAIITSLCKGRTLY-SVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NG  166 (319)
T ss_dssp             BCCCCEEEECSSCEEEECBCCCSEEHH-HHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---
T ss_pred             EeEEEEEEecCCceEEEeecccCCcHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CC
Confidence            466776655    58999999999999 7776533  3699999999999999999999999999999999    44 78


Q ss_pred             CEEEeccccccccccc-----cccccccccCcccchhhcccccc------cCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q psy3574          73 DVKLADFGVSAQITAT-----INKRKSFIGTPYWMAPEVAAVER------KGGYNQQCDIWAVGITAIELAELQPPMFDL  141 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~------~~~~~~~~DiwslG~il~ell~g~~pf~~~  141 (302)
                      .+||+|||++......     ........|++.|+|||++....      ...++.++|||||||++|+|++|..||...
T Consensus       167 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  246 (319)
T 2y4i_B          167 KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ  246 (319)
T ss_dssp             CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC
T ss_pred             CEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            9999999998754321     11223446899999999986311      245789999999999999999999999988


Q ss_pred             ChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         142 HPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       142 ~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ........+........   ....++..+.++|.+||..||.+|||+.++++.+.
T Consensus       247 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~  298 (319)
T 2y4i_B          247 PAEAIIWQMGTGMKPNL---SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE  298 (319)
T ss_dssp             CHHHHHHHHHTTCCCCC---CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHT
T ss_pred             CHHHHHHHhccCCCCCC---CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence            87777666655432221   12357889999999999999999999999999554

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.98  E-value=1.8e-32  Score=238.09  Aligned_cols=186  Identities=14%  Similarity=0.189  Sum_probs=145.3

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      ||++++.+.      .|+||||+++|+|. +++....  ..+++..+..++.|++.||+|||++||+||||||    ++.
T Consensus        85 i~~~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~  161 (302)
T 4e5w_A           85 IVKYKGICTEDGGNGIKLIMEFLPSGSLK-EYLPKNK--NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES  161 (302)
T ss_dssp             BCCEEEEEEC---CCEEEEEECCTTCBHH-HHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE
T ss_pred             eeeeeeEEecCCCceEEEEEEeCCCCcHH-HHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcC
Confidence            456666543      48999999999999 6764432  2699999999999999999999999999999999    778


Q ss_pred             CCCEEEeccccccccccccc---cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC------
Q psy3574          71 CGDVKLADFGVSAQITATIN---KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL------  141 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~------  141 (302)
                      ++.+||+|||++........   ......||..|+|||++.   +..++.++|||||||++|+|++|..|+...      
T Consensus       162 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  238 (302)
T 4e5w_A          162 EHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLM---QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLK  238 (302)
T ss_dssp             TTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHH---HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH
T ss_pred             CCCEEECcccccccccCCCcceeccCCCCCCccccCCeeec---CCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhh
Confidence            89999999999987654321   233456788899999985   556789999999999999999999875321      


Q ss_pred             --------ChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         142 --------HPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       142 --------~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                              ...............   ...+..++..+.+||.+||..||.+|||+.++++.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L  297 (302)
T 4e5w_A          239 MIGPTHGQMTVTRLVNTLKEGKR---LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGF  297 (302)
T ss_dssp             HHCSCCGGGHHHHHHHHHHTTCC---CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             ccCCcccccCHHHHHHHHhccCC---CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence                    122222222222222   223467899999999999999999999999999844

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.98  E-value=3.4e-33  Score=244.97  Aligned_cols=193  Identities=16%  Similarity=0.167  Sum_probs=144.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc-ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI-TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++++.+.    .|+||||+++|+|. +++.... ....+++..+..++.||+.||.|||++||+||||||    ++.+
T Consensus        97 iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~  175 (321)
T 2qkw_B           97 LVSLIGFCDERNEMILIYKYMENGNLK-RHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDEN  175 (321)
T ss_dssp             BCCEEEECCCTTCCEEEEECCTTCBTG-GGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTT
T ss_pred             EeeEEEEEcCCCeEEEEEEcCCCCcHH-HHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCC
Confidence            567777665    58999999999999 6654332 122588899999999999999999999999999999    8889


Q ss_pred             CCEEEecccccccccccc--ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH--
Q psy3574          72 GDVKLADFGVSAQITATI--NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRAL--  147 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~--  147 (302)
                      +.+||+|||+++......  .......||+.|+|||++.   +..++.++|||||||++|+|++|+.||.+..+....  
T Consensus       176 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~  252 (321)
T 2qkw_B          176 FVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFI---KGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNL  252 (321)
T ss_dssp             CCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHH---HCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCH
T ss_pred             CCEEEeecccccccccccccccccccCCCccccCHHHhc---CCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHH
Confidence            999999999997654321  1223446899999999985   566899999999999999999999999754322111  


Q ss_pred             ----HHHHhcC-CCC---CC--CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q psy3574         148 ----FLMSKSG-FKP---PA--LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILI  197 (302)
Q Consensus       148 ----~~i~~~~-~~~---~~--~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~  197 (302)
                          ....... ...   +.  ......++..+.+++.+||..||++|||+.++++++..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  312 (321)
T 2qkw_B          253 AEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY  312 (321)
T ss_dssp             HHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence                0111111 000   00  01122346778999999999999999999999996653

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.98  E-value=4.9e-32  Score=258.70  Aligned_cols=186  Identities=16%  Similarity=0.176  Sum_probs=152.0

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++++.+.   .|+||||+++|+|. +++....  ..+++..+..++.||+.||.|||++||+||||||    ++.++.
T Consensus       453 Iv~l~~~~~~~~~~lv~E~~~~g~L~-~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~  529 (656)
T 2j0j_A          453 IVKLIGVITENPVWIIMELCTLGELR-SFLQVRK--FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC  529 (656)
T ss_dssp             BCCEEEEECSSSCEEEEECCTTCBHH-HHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE
T ss_pred             CCeEEEEEecCceEEEEEcCCCCcHH-HHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCC
Confidence            567777654   58999999999999 7776543  2688999999999999999999999999999999    778899


Q ss_pred             EEEecccccccccccccc-ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATINK-RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||+++........ .....+++.|+|||++.   ...++.++|||||||++|+|++ |..||.+....+....+.
T Consensus       530 vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~  606 (656)
T 2j0j_A          530 VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN---FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE  606 (656)
T ss_dssp             EEECCCCCCCSCCC----------CCGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH
T ss_pred             EEEEecCCCeecCCCcceeccCCCCCcceeCHHHhc---CCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            999999999876543221 22345678999999995   6678999999999999999997 999999988888777776


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .....+    .+..++..+.++|.+||..||.+||++.++++.+.
T Consensus       607 ~~~~~~----~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~  647 (656)
T 2j0j_A          607 NGERLP----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS  647 (656)
T ss_dssp             HTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cCCCCC----CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence            654222    24668999999999999999999999999988554

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.97  E-value=5.9e-33  Score=242.79  Aligned_cols=192  Identities=19%  Similarity=0.163  Sum_probs=144.4

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhc-cccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVG-ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----   67 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----   67 (302)
                      ||++++.+.        .|+||||+.+|+|. +++... ..+..+++..++.++.||+.||.|||++||+||||||    
T Consensus        88 iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl  166 (317)
T 2buj_A           88 ILRLVAYCLRERGAKHEAWLLLPFFKRGTLW-NEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNIL  166 (317)
T ss_dssp             BCCCCEEEEEEETTEEEEEEEEECCTTCBHH-HHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred             eeeEEEEEEeccCCCceeEEEEEeCCCCcHH-HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEE
Confidence            567777663        58999999999999 666542 1123799999999999999999999999999999999    


Q ss_pred             CCCCCCEEEecccccccccccccc---------ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCC
Q psy3574          68 KDRCGDVKLADFGVSAQITATINK---------RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPM  138 (302)
Q Consensus        68 ~~~~~~ikL~DFg~a~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf  138 (302)
                      ++.++.+||+|||++.........         .....|++.|+|||++.+.....++.++|||||||++|+|++|..||
T Consensus       167 ~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~  246 (317)
T 2buj_A          167 LGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY  246 (317)
T ss_dssp             ECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             EcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCCh
Confidence            888899999999998765432111         12345799999999986332233688999999999999999999998


Q ss_pred             CCCChH-HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         139 FDLHPM-RALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       139 ~~~~~~-~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ...... .............+   ....++..+.++|.+||..||.+||++.++++.+.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~  302 (317)
T 2buj_A          247 DMVFQKGDSVALAVQNQLSIP---QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE  302 (317)
T ss_dssp             HHHHHTTSCHHHHHHCC--CC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             hhhhcccchhhHHhhccCCCC---ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence            531100 01111122222222   23567899999999999999999999999999554

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.97  E-value=1.2e-32  Score=239.82  Aligned_cols=191  Identities=14%  Similarity=0.130  Sum_probs=145.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    .|+||||+++|+|. +++.......++++..+..++.||+.||.|||++||+||||||    ++.++
T Consensus        92 i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~  170 (307)
T 2nru_A           92 LVELLGFSSDGDDLCLVYVYMPNGSLL-DRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAF  170 (307)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHH-HHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             eEEEEEEEecCCceEEEEEecCCCcHH-HHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCC
Confidence            466777665    58999999999999 7776543334689999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH----
Q psy3574          73 DVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRA----  146 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----  146 (302)
                      .+||+|||++........  ......|++.|+|||++.    ..++.++|||||||++|+|++|..||........    
T Consensus       171 ~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~  246 (307)
T 2nru_A          171 TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR----GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI  246 (307)
T ss_dssp             CEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT----TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHH
T ss_pred             cEEEeecccccccccccccccccccCCCcCcCChHHhc----CCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHH
Confidence            999999999876554221  123457899999999984    2378999999999999999999999976443221    


Q ss_pred             HHHHHhcCC------CCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         147 LFLMSKSGF------KPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       147 ~~~i~~~~~------~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ...+.....      ...........+..+.+++.+||..||.+|||+.++++.+.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~  302 (307)
T 2nru_A          247 KEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ  302 (307)
T ss_dssp             HHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             HHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence            111111110      00001112334677899999999999999999999998553

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.97  E-value=2.2e-32  Score=240.72  Aligned_cols=179  Identities=20%  Similarity=0.214  Sum_probs=123.0

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCC--CCCCCCcC----CCCCCCEEEecccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG--FKPPALKD----KDRCGDVKLADFGVSA   83 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--i~Hrdlkp----~~~~~~ikL~DFg~a~   83 (302)
                      +|+||||+. |+|. +++........+++..++.++.||+.||.|||++|  |+||||||    ++.++.+||+|||++.
T Consensus       109 ~~lv~e~~~-g~L~-~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  186 (337)
T 3ll6_A          109 FLLLTELCK-GQLV-EFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT  186 (337)
T ss_dssp             EEEEEECCS-EEHH-HHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred             EEEEEEecC-CCHH-HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence            589999997 5888 66654222236999999999999999999999999  99999999    8888999999999998


Q ss_pred             cccccccc------------ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          84 QITATINK------------RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        84 ~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      ........            .....||+.|+|||++.......++.++|||||||++|+|++|..||..........   
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~---  263 (337)
T 3ll6_A          187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVN---  263 (337)
T ss_dssp             CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------
T ss_pred             eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhc---
Confidence            76542211            114468999999999843335668899999999999999999999997654433221   


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILI  197 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~  197 (302)
                       .....+   .....+..+.+||.+||..||.+||++.++++++..
T Consensus       264 -~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  305 (337)
T 3ll6_A          264 -GKYSIP---PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQE  305 (337)
T ss_dssp             ---CCCC---TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             -CcccCC---cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence             111111   234567889999999999999999999999996654

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.97  E-value=1.3e-32  Score=245.48  Aligned_cols=180  Identities=12%  Similarity=0.009  Sum_probs=137.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc--ccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI--TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~--~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      ||++++.+.    .|+|||||+||+|. +++....  ....+++..++.++.||+.||+|||++||+||||||    ++.
T Consensus       129 iv~~~~~~~~~~~~~lv~e~~~~g~L~-~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~  207 (365)
T 3e7e_A          129 FMKFYSAHLFQNGSVLVGELYSYGTLL-NAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGN  207 (365)
T ss_dssp             BCCEEEEEECSSCEEEEECCCCSCBHH-HHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECG
T ss_pred             hhhhheeeecCCCcEEEEeccCCCcHH-HHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecc
Confidence            456666655    48999999999999 7776421  123699999999999999999999999999999999    655


Q ss_pred             -----------CCCEEEecccccccccc--ccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCC
Q psy3574          71 -----------CGDVKLADFGVSAQITA--TINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPP  137 (302)
Q Consensus        71 -----------~~~ikL~DFg~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p  137 (302)
                                 .+.+||+|||+|+.+..  ........+||+.|+|||++.   +..|+.++|||||||++|+|++|+.|
T Consensus       208 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~elltg~~p  284 (365)
T 3e7e_A          208 GFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLS---NKPWNYQIDYFGVAATVYCMLFGTYM  284 (365)
T ss_dssp             GGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHT---TCCBSTHHHHHHHHHHHHHHHHSSCC
T ss_pred             cccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhc---CCCCCccccHHHHHHHHHHHHhCCCc
Confidence                       79999999999976542  122345568999999999996   56689999999999999999999999


Q ss_pred             CCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC-HHHHHH
Q psy3574         138 MFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT-ADKLLQ  193 (302)
Q Consensus       138 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t-~~~ll~  193 (302)
                      |.......     ........    ....+..+.+++..||+.+|.+|++ +.++.+
T Consensus       285 f~~~~~~~-----~~~~~~~~----~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~  332 (365)
T 3e7e_A          285 KVKNEGGE-----CKPEGLFR----RLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQ  332 (365)
T ss_dssp             CEEEETTE-----EEECSCCT----TCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHH
T ss_pred             cccCCCCc-----eeechhcc----ccCcHHHHHHHHHHHcCCCCCCcchHHHHHHH
Confidence            86432210     00000111    1124678999999999999999965 444433

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.97  E-value=1.4e-32  Score=240.78  Aligned_cols=185  Identities=17%  Similarity=0.200  Sum_probs=145.6

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      ||++++.+.      .|+||||+++|+|. +++...    .+++..+..++.||+.||.|||++||+||||||    ++.
T Consensus        95 iv~~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~  169 (318)
T 3lxp_A           95 IIKYKGCCEDAGAASLQLVMEYVPLGSLR-DYLPRH----SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDN  169 (318)
T ss_dssp             BCCEEEEEEETTTTEEEEEECCCTTCBHH-HHGGGS----CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred             hhhEEEEEecCCCceEEEEEecccCCcHH-HHHhhC----CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcC
Confidence            466666554      48999999999999 777654    499999999999999999999999999999999    888


Q ss_pred             CCCEEEeccccccccccccc---cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH---
Q psy3574          71 CGDVKLADFGVSAQITATIN---KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM---  144 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---  144 (302)
                      ++.+||+|||++........   ......++..|+|||++.   +..++.++|||||||++|+|++|..||......   
T Consensus       170 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~  246 (318)
T 3lxp_A          170 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK---EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE  246 (318)
T ss_dssp             TCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHH---HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH
T ss_pred             CCCEEECCccccccccccccccccccCCCCCceeeChHHhc---CCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhh
Confidence            89999999999987654321   123446788899999995   556889999999999999999999998653211   


Q ss_pred             -----------HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         145 -----------RALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       145 -----------~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                                 ............   ...+..++..+.+||.+||..||.+|||+.++++.+.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  306 (318)
T 3lxp_A          247 LIGIAQGQMTVLRLTELLERGER---LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK  306 (318)
T ss_dssp             HHCSCCHHHHHHHHHHHHHTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             hhcccccchhHHHHHHHHhcccC---CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence                       111122222222   2234678999999999999999999999999998554

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.97  E-value=2.5e-32  Score=258.02  Aligned_cols=179  Identities=17%  Similarity=0.147  Sum_probs=136.7

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC---CEEEeccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG---DVKLADFGVS   82 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~---~ikL~DFg~a   82 (302)
                      .|+||||++||+|. +++........+++..++.++.||+.||+|||++||+||||||    ++.++   .+||+|||++
T Consensus        93 ~~LVmEy~~ggsL~-~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a  171 (676)
T 3qa8_A           93 PLLAMEYCEGGDLR-KYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA  171 (676)
T ss_dssp             CCCEEECCSSCBHH-HHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred             EEEEEEeCCCCCHH-HHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccc
Confidence            48999999999999 8887654334699999999999999999999999999999999    44444   4899999999


Q ss_pred             cccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---------Hh-
Q psy3574          83 AQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM---------SK-  152 (302)
Q Consensus        83 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i---------~~-  152 (302)
                      ...... .......|++.|+|||++.   +..++.++||||+||++|+|++|..||............         .. 
T Consensus       172 ~~~~~~-~~~~~~~gt~~Y~APE~l~---~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~  247 (676)
T 3qa8_A          172 KELDQG-ELCTEFVGTLQYLAPELLE---QKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVY  247 (676)
T ss_dssp             CBTTSC-CCCCCCCSCCTTCSSCSSC---CSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSC
T ss_pred             cccccc-cccccccCCcccCChHHhc---cCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhh
Confidence            876554 2334568999999999985   677899999999999999999999999765433211000         00 


Q ss_pred             ----cCCC-----CCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 ----SGFK-----PPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ----~~~~-----~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                          ....     +........++..+.+||.+||..||.+|||+.++++
T Consensus       248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~  297 (676)
T 3qa8_A          248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPN  297 (676)
T ss_dssp             CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCC
T ss_pred             hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhc
Confidence                0000     0001112336788999999999999999999999999

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.97  E-value=7.9e-33  Score=250.97  Aligned_cols=169  Identities=18%  Similarity=0.122  Sum_probs=134.8

Q ss_pred             heeEEEecCCcchHHHHHHhc----cccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVG----ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGV   81 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~----~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~   81 (302)
                      +|++|+++ +++|. +++...    ..+..+++..+..++.||+.||+|||++||+||||||    ++.++.+||+|||+
T Consensus       180 ~~~~~~~~-~~~L~-~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~  257 (413)
T 3dzo_A          180 RFFLYPRM-QSNLQ-TFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEH  257 (413)
T ss_dssp             EEEEEECC-SEEHH-HHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGG
T ss_pred             eEEEeehh-cCCHH-HHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccc
Confidence            46777765 56998 777421    1123688999999999999999999999999999999    88899999999999


Q ss_pred             ccccccccccccccccCcccchhhccccc-------ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC
Q psy3574          82 SAQITATINKRKSFIGTPYWMAPEVAAVE-------RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG  154 (302)
Q Consensus        82 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~  154 (302)
                      ++.....   ....+| +.|+|||++.+.       ....|+.++|||||||++|+|++|+.||...........+.   
T Consensus       258 a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~---  330 (413)
T 3dzo_A          258 LVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIF---  330 (413)
T ss_dssp             CEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGG---
T ss_pred             eeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHH---
Confidence            8876543   345578 999999998421       23447789999999999999999999998765433222221   


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         155 FKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       155 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                            .....++..+.+||.+||..||.+||++.++++
T Consensus       331 ------~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          331 ------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             ------SSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ------hhcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                  122457899999999999999999999999999

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.97  E-value=6.3e-32  Score=234.62  Aligned_cols=165  Identities=16%  Similarity=0.216  Sum_probs=124.8

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~   68 (302)
                      ||++++.+.        .|+||||++||+|. +++.... ...+++..++.++.||+.||+|||++||+||||||    +
T Consensus        73 i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~  150 (299)
T 3m2w_A           73 IVRIVDVYENLYAGRKCLLIVMECLDGGELF-SRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY  150 (299)
T ss_dssp             BCCEEEEEEEEETTEEEEEEEECCCCSCBHH-HHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred             chhHHhhhhhhcCCCceEEEEEeecCCCcHH-HHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence            456666543        58999999999999 7776543 22699999999999999999999999999999999    4


Q ss_pred             CC---CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          69 DR---CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        69 ~~---~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                      +.   ++.+||+|||++....                         +..++.++|||||||++|+|++|..||.+.....
T Consensus       151 ~~~~~~~~~kl~Dfg~a~~~~-------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~  205 (299)
T 3m2w_A          151 TSKRPNAILKLTDFGFAKETT-------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA  205 (299)
T ss_dssp             SSSSTTCCEEECCCTTCEECT-------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----
T ss_pred             ecCCCCCcEEEeccccccccc-------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh
Confidence            44   7899999999985432                         2236789999999999999999999997665443


Q ss_pred             HHHHHHhcCCCCCCCCC----CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFKPPALKD----KDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~~~~~~----~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ........ ........    ...++.++.+||.+||..||.+|||+.++++
T Consensus       206 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          206 ISPGMKTR-IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             --CCSCCS-SCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhHHHHHH-HhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            22111111 01111111    1457999999999999999999999999999

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.97  E-value=9.6e-32  Score=237.44  Aligned_cols=183  Identities=17%  Similarity=0.171  Sum_probs=139.2

Q ss_pred             hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHH--------hCCCCCCCCcC----CCCCCCEEE
Q psy3574           9 LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS--------KSGFKPPALKD----KDRCGDVKL   76 (302)
Q Consensus         9 ~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH--------~~~i~Hrdlkp----~~~~~~ikL   76 (302)
                      ..|+||||+++|+|. +++...    .+++..+..++.|++.||.|||        ++||+||||||    ++.++.+||
T Consensus       114 ~~~lv~e~~~~g~L~-~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL  188 (342)
T 1b6c_B          114 QLWLVSDYHEHGSLF-DYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI  188 (342)
T ss_dssp             CEEEEECCCTTCBHH-HHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEE
T ss_pred             eeEEEEeecCCCcHH-HHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEE
Confidence            458999999999999 777654    4999999999999999999999        89999999999    888899999


Q ss_pred             eccccccccccccc----cccccccCcccchhhcccccccC---CCCchhhHHHHHHHHHHHHhC----------CCCCC
Q psy3574          77 ADFGVSAQITATIN----KRKSFIGTPYWMAPEVAAVERKG---GYNQQCDIWAVGITAIELAEL----------QPPMF  139 (302)
Q Consensus        77 ~DFg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~---~~~~~~DiwslG~il~ell~g----------~~pf~  139 (302)
                      +|||++........    ......||+.|+|||++.+....   .++.++|||||||++|+|++|          ..||.
T Consensus       189 ~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~  268 (342)
T 1b6c_B          189 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY  268 (342)
T ss_dssp             CCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred             EECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcc
Confidence            99999977654322    22345799999999998522100   123689999999999999999          78886


Q ss_pred             CCC-----hHHHHHHHHhcCCCCCCCC--CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         140 DLH-----PMRALFLMSKSGFKPPALK--DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       140 ~~~-----~~~~~~~i~~~~~~~~~~~--~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ...     .......+......+....  .....+..+.++|.+||..||.+|||+.++++++.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~  332 (342)
T 1b6c_B          269 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS  332 (342)
T ss_dssp             TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred             ccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence            542     2233333333222221111  11234567999999999999999999999999654

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.97  E-value=1e-31  Score=236.17  Aligned_cols=190  Identities=13%  Similarity=0.150  Sum_probs=146.3

Q ss_pred             Cchhhhcc------hheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHF------LQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~------~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      ||++++.+      ..|+||||+++|+|. +++....  ..+++..+..++.||+.||.|||++||+||||||    ++.
T Consensus       104 iv~~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~  180 (326)
T 2w1i_A          104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLR-DYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN  180 (326)
T ss_dssp             BCCEEEEECC----CCEEEECCCTTCBHH-HHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE
T ss_pred             eeeEEEEEEecCCCceEEEEECCCCCCHH-HHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcC
Confidence            45666654      358999999999999 7776543  2689999999999999999999999999999999    778


Q ss_pred             CCCEEEecccccccccccccc---ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH---
Q psy3574          71 CGDVKLADFGVSAQITATINK---RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM---  144 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---  144 (302)
                      ++.+||+|||++.........   .....++..|+|||++.   +..++.++|||||||++|+|++|..||......   
T Consensus       181 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~  257 (326)
T 2w1i_A          181 ENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT---ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMR  257 (326)
T ss_dssp             TTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHH---HCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHH
T ss_pred             CCcEEEecCcchhhccccccccccccCCCCceeEECchhhc---CCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence            899999999999876543221   22345677899999985   556889999999999999999999987532110   


Q ss_pred             ---------H---HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHh
Q psy3574         145 ---------R---ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHR  199 (302)
Q Consensus       145 ---------~---~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~  199 (302)
                               .   .+..........   ..+..++..+.++|.+||..||.+|||+.++++.+...+
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~  321 (326)
T 2w1i_A          258 MIGNDKQGQMIVFHLIELLKNNGRL---PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  321 (326)
T ss_dssp             HHCTTCCTHHHHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhccccchhhhHHHHHHHhhcCCCC---CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                     0   111112222112   224668999999999999999999999999998665433

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.97  E-value=7.6e-32  Score=237.90  Aligned_cols=167  Identities=14%  Similarity=0.029  Sum_probs=125.5

Q ss_pred             chheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHH-hCCCCCCCCcC----CCCCC----------
Q psy3574           8 FLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS-KSGFKPPALKD----KDRCG----------   72 (302)
Q Consensus         8 ~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH-~~~i~Hrdlkp----~~~~~----------   72 (302)
                      ...|||||||++|++.+.+ .. .   .+++..++.++.||+.||+||| ++||+||||||    ++.++          
T Consensus       135 ~~~~lv~E~~~~g~ll~~~-~~-~---~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~  209 (336)
T 2vuw_A          135 DQLFIVLEFEFGGIDLEQM-RT-K---LSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNG  209 (336)
T ss_dssp             TCEEEEEEEECCCEETGGG-TT-T---CCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETT
T ss_pred             CeEEEEEEecCCCccHHHH-Hh-c---CCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccC
Confidence            3469999999999776344 32 3   5899999999999999999999 99999999999    55555          


Q ss_pred             ----------CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHH-HHHHHhCCCCCCCC
Q psy3574          73 ----------DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT-AIELAELQPPMFDL  141 (302)
Q Consensus        73 ----------~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~i-l~ell~g~~pf~~~  141 (302)
                                .+||+|||+|+.....     ..+||+.|+|||++.   +.. +.++||||+|++ .+++++|..||.+.
T Consensus       210 ~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aPE~~~---g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~  280 (336)
T 2vuw_A          210 KSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDEDLFT---GDG-DYQFDIYRLMKKENNNRWGEYHPYSNV  280 (336)
T ss_dssp             EEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCSGGGC---CCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH
T ss_pred             ccccccCCCceEEEeeccccEecCCC-----cEEEeecccChhhhc---CCC-ccceehhhhhCCCCcccccccCCCcch
Confidence                      8999999999876542     347999999999995   333 789999998776 77889999998532


Q ss_pred             Ch-HHHHHHHHhc-CCCC-CCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHH-H
Q psy3574         142 HP-MRALFLMSKS-GFKP-PALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLL-Q  193 (302)
Q Consensus       142 ~~-~~~~~~i~~~-~~~~-~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll-~  193 (302)
                      .. ......+... .... +....+..+++++++||.+||++|     |+.++| +
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~  331 (336)
T 2vuw_A          281 LWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQ  331 (336)
T ss_dssp             HHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHH
T ss_pred             hhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhc
Confidence            11 1122222211 1111 111122357889999999999976     999999 9

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.96  E-value=6.2e-30  Score=245.75  Aligned_cols=172  Identities=22%  Similarity=0.257  Sum_probs=133.5

Q ss_pred             Cchhhhcch---------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----
Q psy3574           1 MSRVFNHFL---------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----   67 (302)
Q Consensus         1 iv~~~~~~~---------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----   67 (302)
                      ||++++.+.         .||||||++|++|. +++..     .+++.++..++.||+.||.|||++||+||||||    
T Consensus       141 iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~-~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIl  214 (681)
T 2pzi_A          141 IVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK-RSKGQ-----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIM  214 (681)
T ss_dssp             BCCEEEEEEEECTTSCEEEEEEEECCCCEECC-----C-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred             cCeEeeeEeecCCCCCceeEEEEEeCCCCcHH-HHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeE
Confidence            567777665         48999999999999 66543     589999999999999999999999999999999    


Q ss_pred             CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy3574          68 KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRAL  147 (302)
Q Consensus        68 ~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  147 (302)
                      ++. +.+||+|||+++.....    ...+||+.|+|||++.   + .++.++|||||||++|+|++|.+||.+....   
T Consensus       215 l~~-~~~kl~DFG~a~~~~~~----~~~~gt~~y~aPE~~~---~-~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~---  282 (681)
T 2pzi_A          215 LTE-EQLKLIDLGAVSRINSF----GYLYGTPGFQAPEIVR---T-GPTVATDIYTVGRTLAALTLDLPTRNGRYVD---  282 (681)
T ss_dssp             ECS-SCEEECCCTTCEETTCC----SCCCCCTTTSCTTHHH---H-CSCHHHHHHHHHHHHHHHHSCCCEETTEECS---
T ss_pred             EeC-CcEEEEecccchhcccC----CccCCCccccCHHHHc---C-CCCCceehhhhHHHHHHHHhCCCCCcccccc---
Confidence            444 59999999999876543    3557999999999984   2 3588999999999999999999988642110   


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q psy3574         148 FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIH  198 (302)
Q Consensus       148 ~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~  198 (302)
                              ..+........+..+.++|.+||..||.+||+..+.+.+.|..
T Consensus       283 --------~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          283 --------GLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             --------SCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             --------cccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence                    0011000112367899999999999999999877777755543

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.94  E-value=7.3e-28  Score=207.83  Aligned_cols=158  Identities=16%  Similarity=0.052  Sum_probs=120.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.+.    .|+||||++|++|. ++++. +    ....++..++.||+.||+|||++||+||||||    ++.+|
T Consensus        93 iv~~~~~~~~~~~~~lv~e~~~g~~L~-~~l~~-~----~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g  166 (286)
T 3uqc_A           93 VARVLDVVHTRAGGLVVAEWIRGGSLQ-EVADT-S----PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDG  166 (286)
T ss_dssp             BCCEEEEEEETTEEEEEEECCCEEEHH-HHHTT-C----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTS
T ss_pred             cceeeEEEEECCcEEEEEEecCCCCHH-HHHhc-C----CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCC
Confidence            567777665    58999999999999 77743 3    34446788999999999999999999999999    77888


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH---H
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF---L  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~---~  149 (302)
                      .+||+++|                    |++          .++.++|||||||++|+|++|+.||.+.+......   .
T Consensus       167 ~~kl~~~~--------------------~~~----------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~  216 (286)
T 3uqc_A          167 DVVLAYPA--------------------TMP----------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAER  216 (286)
T ss_dssp             CEEECSCC--------------------CCT----------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCB
T ss_pred             CEEEEecc--------------------ccC----------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHH
Confidence            89887543                    222          26789999999999999999999998765432110   0


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ..... ..+.......++..+.++|.+||..||.+| |+.++++.+.
T Consensus       217 ~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~  261 (286)
T 3uqc_A          217 DTAGQ-PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQ  261 (286)
T ss_dssp             CTTSC-BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHH
T ss_pred             HhccC-CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHH
Confidence            00111 111111235679999999999999999999 9999999554

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.93  E-value=1e-27  Score=225.11  Aligned_cols=126  Identities=17%  Similarity=0.150  Sum_probs=92.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      |+|++++|.    .||||||++||+|. +++..++   ++++   ..|+.||+.||+|||++||+||||||    ++.+|
T Consensus       304 i~~~~~~~ed~~~~yLVMEyv~G~~L~-d~i~~~~---~l~~---~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg  376 (569)
T 4azs_A          304 APAVLAHGENAQSGWLVMEKLPGRLLS-DMLAAGE---EIDR---EKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQ  376 (569)
T ss_dssp             CCCEEEEEECSSEEEEEEECCCSEEHH-HHHHTTC---CCCH---HHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTS
T ss_pred             eeEEEEEEEECCEEEEEEecCCCCcHH-HHHHhCC---CCCH---HHHHHHHHHHHHHHHHCCceeccCchHhEEECCCC
Confidence            577787776    59999999999999 8888877   6765   45899999999999999999999999    88999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCC
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPP  137 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p  137 (302)
                      ++||+|||+|+..........+.+||+.|||||++.    +.+...+|+|++|++++.|.++..+
T Consensus       377 ~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~----g~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          377 HARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFA----ENKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             CEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC---------------------CCCCTTHHH
T ss_pred             CEEEeecccCeeCCCCCccccCceechhhccHHHhC----CCCCCcccccccccchhhhccccch
Confidence            999999999988776555566778999999999995    3367789999999999887665443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.72  E-value=8e-19  Score=163.82  Aligned_cols=114  Identities=16%  Similarity=0.142  Sum_probs=93.6

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .||||||++||+|. +++..           +..++.|++.||.|||++||+||||||    ++.  .+||+|||+++..
T Consensus       414 ~~lVmE~~~ggsL~-~~l~~-----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~  479 (540)
T 3en9_A          414 KRIMMSYINGKLAK-DVIED-----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKIS  479 (540)
T ss_dssp             TEEEEECCCSEEHH-HHSTT-----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred             cEEEEECCCCCCHH-HHHHH-----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence            58999999999999 66543           678999999999999999999999999    444  9999999999887


Q ss_pred             cccccc-------ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCC
Q psy3574          86 TATINK-------RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPM  138 (302)
Q Consensus        86 ~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf  138 (302)
                      ......       ....+||+.|||||++... ...|+..+|+|+..+-..+.+.++.+|
T Consensus       480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~-~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERF-LEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHH-HHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             CCccccccchhhhhhhhcCCCCcCCHHHHHHH-HHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            653221       2356899999999999631 245778899999998888887776665

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.52  E-value=3.3e-15  Score=128.16  Aligned_cols=80  Identities=11%  Similarity=-0.046  Sum_probs=65.9

Q ss_pred             hhhcchheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecc
Q psy3574           4 VFNHFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADF   79 (302)
Q Consensus         4 ~~~~~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DF   79 (302)
                      +++....|+||||++||+|. + +         .......++.|++.||.|||++||+||||||    ++ +|.+||+||
T Consensus       169 ~~~~~~~~lvmE~~~g~~L~-~-l---------~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DF  236 (282)
T 1zar_A          169 VYAWEGNAVLMELIDAKELY-R-V---------RVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDF  236 (282)
T ss_dssp             EEEEETTEEEEECCCCEEGG-G-C---------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCC
T ss_pred             EEeccceEEEEEecCCCcHH-H-c---------chhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEEC
Confidence            34444569999999999999 4 2         2245668999999999999999999999999    66 999999999


Q ss_pred             ccccccccccccccccccCcccchhhccc
Q psy3574          80 GVSAQITATINKRKSFIGTPYWMAPEVAA  108 (302)
Q Consensus        80 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~  108 (302)
                      |+|+.             +..++|||.+.
T Consensus       237 G~a~~-------------~~~~~a~e~l~  252 (282)
T 1zar_A          237 PQSVE-------------VGEEGWREILE  252 (282)
T ss_dssp             TTCEE-------------TTSTTHHHHHH
T ss_pred             CCCeE-------------CCCCCHHHHHH
Confidence            99852             44578999874

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.17  E-value=1.2e-11  Score=104.49  Aligned_cols=69  Identities=16%  Similarity=0.105  Sum_probs=55.1

Q ss_pred             chheeEEEecCC-c----chHHHHHHhccccccccccchhHHHhhHHHHHHHHH-hCCCCCCCCcC----CCCCCCEEEe
Q psy3574           8 FLQVAAVERKGG-Y----NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS-KSGFKPPALKD----KDRCGDVKLA   77 (302)
Q Consensus         8 ~~~~iv~E~~~~-g----~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH-~~~i~Hrdlkp----~~~~~~ikL~   77 (302)
                      ...|+||||+.+ |    +|. ++.   .   ..++..+..++.|++.||.||| ++||+||||||    ++.  .++|+
T Consensus       141 ~~~~lVmE~~g~~g~~~~~L~-~~~---~---~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~li  211 (258)
T 1zth_A          141 MKNVLLMEFIGEDELPAPTLV-ELG---R---ELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFI  211 (258)
T ss_dssp             ETTEEEEECCEETTEECCBHH-HHG---G---GGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEEC
T ss_pred             CCCEEEEEecCCCCCccccHH-HHh---h---ccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEE
Confidence            346899999942 4    555 332   1   2457789999999999999999 99999999999    444  99999


Q ss_pred             cccccccc
Q psy3574          78 DFGVSAQI   85 (302)
Q Consensus        78 DFg~a~~~   85 (302)
                      |||+|...
T Consensus       212 DFG~a~~~  219 (258)
T 1zth_A          212 DMGQAVTL  219 (258)
T ss_dssp             CCTTCEET
T ss_pred             ECcccccC
Confidence            99998654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.73  E-value=5.1e-09  Score=92.79  Aligned_cols=65  Identities=6%  Similarity=0.081  Sum_probs=52.6

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC----------CEE
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG----------DVK   75 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~----------~ik   75 (302)
                      .||||||++|++|. .+         ........++.||+.+|.+||++||+||||||    +..+|          .+.
T Consensus       186 ~~LVME~i~G~~L~-~l---------~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~  255 (397)
T 4gyi_A          186 HTIVMSLVDALPMR-QV---------SSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPI  255 (397)
T ss_dssp             TEEEEECCSCEEGG-GC---------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEE
T ss_pred             ceEEEEecCCccHh-hh---------cccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceE
Confidence            47999999998886 32         23456778999999999999999999999999    44443          389


Q ss_pred             Eeccccccc
Q psy3574          76 LADFGVSAQ   84 (302)
Q Consensus        76 L~DFg~a~~   84 (302)
                      |+||+.+..
T Consensus       256 iID~~Q~V~  264 (397)
T 4gyi_A          256 IIXFPQMVS  264 (397)
T ss_dssp             ECCCTTCEE
T ss_pred             EEEeCCccc
Confidence            999998754

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.67  E-value=0.00058  Score=55.06  Aligned_cols=132  Identities=12%  Similarity=0.051  Sum_probs=82.5

Q ss_pred             chHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-----CCCCCCEEEecccccccccccccccccc
Q psy3574          21 NQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-----KDRCGDVKLADFGVSAQITATINKRKSF   95 (302)
Q Consensus        21 ~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-----~~~~~~ikL~DFg~a~~~~~~~~~~~~~   95 (302)
                      +|. +++...+  .+|+|+++|.++.|.+.+|.-+-.+.--|..|..     +..+|.|...+ +.+            .
T Consensus        34 SL~-eIL~~~~--~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s------------~   97 (229)
T 2yle_A           34 SLE-EILRLYN--QPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AAD------------D   97 (229)
T ss_dssp             EHH-HHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred             cHH-HHHHHcC--CCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-ccc------------c
Confidence            788 7776654  3899999999999999998876321112233322     55555555443 110            0


Q ss_pred             ccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHH
Q psy3574          96 IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVK  175 (302)
Q Consensus        96 ~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~  175 (302)
                      .....+.|||...    ...+.+.-|+|||+++|..+--..|-.                      ....+|+.+..||.
T Consensus        98 ~~~~~~~~pe~~~----~~~te~~~IysLG~tLY~ALDygL~e~----------------------eE~eLS~~LE~LL~  151 (229)
T 2yle_A           98 AGEPPPVAGKLGY----SQCMETEVIESLGIIIYKALDYGLKEN----------------------EERELSPPLEQLID  151 (229)
T ss_dssp             ---------CCSS----SSSCHHHHHHHHHHHHHHHHTTTCCTT----------------------EEECCCHHHHHHHH
T ss_pred             ccccCCCChhhcc----ccchHHHHHHHHHHHHHHHhhcCCCcc----------------------cchhhCHHHHHHHH
Confidence            1233466888762    334678889999999999876544311                      12457999999999


Q ss_pred             Hhhhc-------------------------CCCCCCCHHHHHHH
Q psy3574         176 IALTK-------------------------NPKKRPTADKLLQV  194 (302)
Q Consensus       176 ~~L~~-------------------------dp~~R~t~~~ll~~  194 (302)
                      .|..-                         .+..|.+.+++++.
T Consensus       152 ~Mt~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~  195 (229)
T 2yle_A          152 HMANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKL  195 (229)
T ss_dssp             HHTTCCC--------------------CCSCCCCCCSHHHHHHH
T ss_pred             HHHhcccccccccccccccccccccccccccccCcCCHHHHHHH
Confidence            99765                         24688899999873

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.54  E-value=3.1e-05  Score=66.39  Aligned_cols=122  Identities=11%  Similarity=-0.006  Sum_probs=73.2

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh--------------------------------
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK--------------------------------   57 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~--------------------------------   57 (302)
                      .|+|||+++|.+|......      .++..+...++.++...|+.||+                                
T Consensus        91 ~~~vm~~i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (304)
T 3sg8_A           91 SFAGFTKIKGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRE  164 (304)
T ss_dssp             SCEEEECCCCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTT
T ss_pred             ceEEEcccCCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhccc
Confidence            3789999999988732221      36666677777777777777775                                


Q ss_pred             --------------------------CCCCCCCCcC----CCC--CCCEEEeccccccccccccccccccccCcccchhh
Q psy3574          58 --------------------------SGFKPPALKD----KDR--CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPE  105 (302)
Q Consensus        58 --------------------------~~i~Hrdlkp----~~~--~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE  105 (302)
                                                ..++|+|+++    ++.  .+.+.|+||+.+........... ......-..|+
T Consensus       165 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~-~~~~~~~~~~~  243 (304)
T 3sg8_A          165 LKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFIS-LMEDDEEYGME  243 (304)
T ss_dssp             SCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHT-TCCTTTSCCHH
T ss_pred             CCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHH-HHhhccccCHH
Confidence                                      1368999999    344  45678999998865322111100 00000001222


Q ss_pred             cccc--cccCC---------CCchhhHHHHHHHHHHHHhCCCCC
Q psy3574         106 VAAV--ERKGG---------YNQQCDIWAVGITAIELAELQPPM  138 (302)
Q Consensus       106 ~~~~--~~~~~---------~~~~~DiwslG~il~ell~g~~pf  138 (302)
                      ....  .....         .....+.|++|.++|.+.+|..+|
T Consensus       244 ~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          244 FVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence            1110  00000         112358999999999999998876

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.27  E-value=0.00019  Score=59.90  Aligned_cols=39  Identities=10%  Similarity=0.014  Sum_probs=30.5

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK   57 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~   57 (302)
                      .|+||||++|.+|. ..+        .+......++.++..+|..||+
T Consensus        85 ~~lv~e~i~G~~l~-~~~--------~~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           85 SNLLMSEADGVLCS-EEY--------EDEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             EEEEEECCSSEEHH-HHC--------CTTTCHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEecCCeehh-hcc--------CCcccHHHHHHHHHHHHHHHhC
Confidence            47999999999987 431        1234456789999999999998

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.00  E-value=0.00041  Score=57.46  Aligned_cols=24  Identities=8%  Similarity=-0.150  Sum_probs=18.5

Q ss_pred             CCCCCCcC----CCCCCCEEEecccccc
Q psy3574          60 FKPPALKD----KDRCGDVKLADFGVSA   83 (302)
Q Consensus        60 i~Hrdlkp----~~~~~~ikL~DFg~a~   83 (302)
                      ++|+|++|    ++.++.+.|+|||.+.
T Consensus       186 l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             EECCCCCCCcEEEECCcEEEEEcchhcc
Confidence            89999999    4444445699999864

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=96.96  E-value=0.00024  Score=62.24  Aligned_cols=42  Identities=10%  Similarity=-0.089  Sum_probs=32.6

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK   57 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~   57 (302)
                      .|+||||++|..+.+..+   .   .++..+...++.++..+|..||.
T Consensus       116 ~~~vme~v~G~~l~~~~~---~---~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          116 AFYIMEFVSGRVLWDQSL---P---GMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             CEEEEECCCCBCCCCTTC---T---TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEecCCeecCCCcc---c---cCCHHHHHHHHHHHHHHHHHHhC
Confidence            579999999988752111   1   46677788899999999999997

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=93.63  E-value=0.067  Score=45.49  Aligned_cols=26  Identities=19%  Similarity=0.193  Sum_probs=19.2

Q ss_pred             CCCCCCCcC----CCC---CCCE-EEeccccccc
Q psy3574          59 GFKPPALKD----KDR---CGDV-KLADFGVSAQ   84 (302)
Q Consensus        59 ~i~Hrdlkp----~~~---~~~i-kL~DFg~a~~   84 (302)
                      .++|+|+.+    .+.   ++.+ .|+||+.+..
T Consensus       191 ~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          191 RLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             EEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             eeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            468999999    333   3554 8999998754

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=89.16  E-value=0.49  Score=38.89  Aligned_cols=40  Identities=5%  Similarity=-0.242  Sum_probs=27.0

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK   57 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~   57 (302)
                      .|+|||+++|.++. .....       .......+..++...|..||.
T Consensus        95 ~~lvme~l~G~~~~-~~~~~-------~~~~~~~~~~~l~~~L~~Lh~  134 (272)
T 4gkh_A           95 AWLLTTAIPGKTAF-QVLEE-------YPDSGENIVDALAVFLRRLHS  134 (272)
T ss_dssp             EEEEEECCCSEEHH-HHHHH-------CGGGHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEeeCCcccc-ccccC-------CHHHHHHHHHHHHHHHHHhcC
Confidence            37999999998887 44332       123344566777777777775

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=85.48  E-value=0.87  Score=38.23  Aligned_cols=26  Identities=12%  Similarity=-0.103  Sum_probs=19.9

Q ss_pred             CCCCCCCcC---CCCCCCEEEeccccccc
Q psy3574          59 GFKPPALKD---KDRCGDVKLADFGVSAQ   84 (302)
Q Consensus        59 ~i~Hrdlkp---~~~~~~ikL~DFg~a~~   84 (302)
                      .++|+|+.+   +..++.+.++||..+..
T Consensus       174 ~l~HgDl~~~Nil~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          174 AACHCDPLCENFLDTGERMWIVDWEYSGM  202 (301)
T ss_dssp             EEECSCCCGGGEEECSSCEEECCCTTCEE
T ss_pred             eeeccCCCcCCEEECCCCEEEEecccccC
Confidence            368999988   55667789999987643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	302
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-30
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-05
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-28
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-04
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-27
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	8e-06
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-26
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-06
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-26
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-05
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-26
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	8e-05
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-25
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-04
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-22
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	0.003
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-22
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-04
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	6e-22
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-04
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-21
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	0.002
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-21
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-21
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-04
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-20
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-20
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	0.003
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-20
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-04
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	6e-20
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	0.003
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	7e-20
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-19
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-04
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-19
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	7e-04
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-18
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-18
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-18
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-18
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	9e-18
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-17
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	0.003
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-17
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	9e-05
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-17
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-17
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-17
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	8e-17
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	8e-17
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	9e-17
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-16
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-16
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-16
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-16
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-16
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	5e-16
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-16
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	6e-16
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	0.003
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	7e-16
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-15
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	6e-04
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-15
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-15
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-15
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-14
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-14
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-14
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-14
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	4e-14
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	6e-14
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-13
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	0.004
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-13
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	4e-13
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	8e-13
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-12
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-11
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	5e-10
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	7e-10
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-09
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-05

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (285), Expect = 2e-30
 Identities = 71/163 (43%), Positives = 92/163 (56%), Gaps = 30/163 (18%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGI 126
              GD+KLADFGVSA+ T TI +R SFIGTPYWMAPEV   E  +   Y+ + D+W++GI
Sbjct: 144 TLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 203

Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
           T IE+AE++PP  +L+PMR L  ++KS  +PP L    RWSS F +F+K  L KN   R 
Sbjct: 204 TLIEMAEIEPPHHELNPMRVLLKIAKS--EPPTLAQPSRWSSNFKDFLKKCLEKNVDARW 261

Query: 187 TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSK 229
           T  +LLQ                          HPF   D +K
Sbjct: 262 TTSQLLQ--------------------------HPFVTVDSNK 278

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (102), Expect = 1e-05
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)

Query: 16  RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGD 73
           +   Y+ + D+W++GIT IE+AE++PP  +L+PMR L  ++KS  +PP L    R   
Sbjct: 188 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS--EPPTLAQPSRWSS 243

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  109 bits (273), Expect = 2e-28
 Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 33/173 (19%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
              G VKL DFG ++ +        SF+GTPYWMAPEV     +G Y+ + D+W++GIT 
Sbjct: 149 SEPGLVKLGDFGSASIMAPA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC 204

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
           IELAE +PP+F+++ M AL+ ++++            WS  F NFV   L K P+ RPT+
Sbjct: 205 IELAERKPPLFNMNAMSALYHIAQNESPAL---QSGHWSEYFRNFVDSCLQKIPQDRPTS 261

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSN 241
           + LL+                          H F   +    V ++L+Q+  +
Sbjct: 262 EVLLK--------------------------HRFVLRERPPTVIMDLIQRTKD 288

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 18/49 (36%), Positives = 34/49 (69%)

Query: 15  ERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP 63
             +G Y+ + D+W++GIT IELAE +PP+F+++ M AL+ ++++     
Sbjct: 186 MDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL 234

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (261), Expect = 4e-27
 Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 8/134 (5%)

Query: 60  FKPPALKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQC 119
            K   +      G VK+ D G++    A+  K  + IGTP +MAPE+     +  Y++  
Sbjct: 140 LKCDNIFITGPTGSVKIGDLGLATLKRASFAK--AVIGTPEFMAPEMY----EEKYDESV 193

Query: 120 DIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALT 179
           D++A G+  +E+A  + P  +      ++    SG KP +              ++  + 
Sbjct: 194 DVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKV--AIPEVKEIIEGCIR 251

Query: 180 KNPKKRPTADKLLQ 193
           +N  +R +   LL 
Sbjct: 252 QNKDERYSIKDLLN 265

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 8e-06
 Identities = 12/63 (19%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 17  KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVKL 76
           +  Y++  D++A G+  +E+A  + P  +      ++    SG KP +    D+    ++
Sbjct: 186 EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASF---DKVAIPEV 242

Query: 77  ADF 79
            + 
Sbjct: 243 KEI 245

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (258), Expect = 1e-26
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 3/130 (2%)

Query: 69  DRCGDVKLADFGVSAQIT--ATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
                VK+ DFG++   +  +  ++ +   G+  WMAPEV  ++ K  Y+ Q D++A GI
Sbjct: 138 HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 197

Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-KDRWSSTFHNFVKIALTKNPKKR 185
              EL   Q P  +++    +  M   G+  P L   +          +   L K   +R
Sbjct: 198 VLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 257

Query: 186 PTADKLLQVI 195
           P   ++L  I
Sbjct: 258 PLFPQILASI 267

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (108), Expect = 2e-06
 Identities = 16/70 (22%), Positives = 28/70 (40%)

Query: 10  QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD 69
           +V  ++ K  Y+ Q D++A GI   EL   Q P  +++    +  M   G+  P L    
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVR 235

Query: 70  RCGDVKLADF 79
                 +   
Sbjct: 236 SNCPKAMKRL 245

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (259), Expect = 1e-26
 Identities = 53/125 (42%), Positives = 80/125 (64%), Gaps = 5/125 (4%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
              G VKL DFG  AQIT   +KR + +GTPYWMAPEV     +  Y  + DIW++GI A
Sbjct: 150 GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV---TRKAYGPKVDIWSLGIMA 206

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
           IE+ E +PP  + +P+RAL+L++ +G   P L++ ++ S+ F +F+   L  + +KR +A
Sbjct: 207 IEMIEGEPPYLNENPLRALYLIATNG--TPELQNPEKLSAIFRDFLNRCLDMDVEKRGSA 264

Query: 189 DKLLQ 193
            +LLQ
Sbjct: 265 KELLQ 269

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 20/56 (35%), Positives = 37/56 (66%), Gaps = 2/56 (3%)

Query: 16  RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRC 71
            +  Y  + DIW++GI AIE+ E +PP  + +P+RAL+L++ +G   P L++ ++ 
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG--TPELQNPEKL 242

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 5e-26
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 7/125 (5%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D   +VKL DFG++  +    +  K+F+GTPY+M+PE      +  YN++ DIW++G   
Sbjct: 148 DGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM---NRMSYNEKSDIWSLGCLL 204

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            EL  L PP            + +  F+        R+S   +  +   L      RP+ 
Sbjct: 205 YELCALMPPFTAFSQKELAGKIREGKFRRI----PYRYSDELNEIITRMLNLKDYHRPSV 260

Query: 189 DKLLQ 193
           +++L+
Sbjct: 261 EEILE 265

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 8e-05
 Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 1   MSRVFNHFLQVAAVE--RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS 58
            ++ F       + E   +  YN++ DIW++G    EL  L PP            + + 
Sbjct: 170 FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG 229

Query: 59  GFKPP 63
            F+  
Sbjct: 230 KFRRI 234

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.9 bits (246), Expect = 5e-25
 Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 10/125 (8%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
              G++K+ADFG S    ++  +R +  GT  ++ PE+        ++++ D+W++G+  
Sbjct: 140 GSAGELKIADFGWSVHAPSS--RRTTLCGTLDYLPPEMI---EGRMHDEKVDLWSLGVLC 194

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E    +PP            +S+  F  P     D  +    + +   L  NP +RP  
Sbjct: 195 YEFLVGKPPFEANTYQETYKRISRVEFTFP-----DFVTEGARDLISRLLKHNPSQRPML 249

Query: 189 DKLLQ 193
            ++L+
Sbjct: 250 REVLE 254

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 5e-04
 Identities = 9/54 (16%), Positives = 21/54 (38%)

Query: 16  RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD 69
               ++++ D+W++G+   E    +PP            +S+  F  P    + 
Sbjct: 177 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 230

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 93.6 bits (232), Expect = 2e-22
 Identities = 40/225 (17%), Positives = 70/225 (31%), Gaps = 35/225 (15%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           +    R  ++KL DFG++A +       K   GT  + APEVA            D+W+V
Sbjct: 156 MFTTKRSNELKLIDFGLTAHLDPK-QSVKVTTGTAEFAAPEVA---EGKPVGYYTDMWSV 211

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G+ +  L     P    +    L  +    +           S    +F++  L  +P  
Sbjct: 212 GVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD-DSAFSGISEDGKDFIRKLLLADPNT 270

Query: 185 RPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK----YDMSKRVAIELLQKVS 240
           R T  + L+                          HP+           ++      K+ 
Sbjct: 271 RMTIHQALE--------------------------HPWLTPGNAPGRDSQIPSSRYTKIR 304

Query: 241 NPPTTYTDLEPDDDGEIPNVPQRIQSRLLTARNNHARNPNIDESE 285
           +   T  D  P+    +  +      R    +    R+   D SE
Sbjct: 305 DSIKTKYDAWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSE 349

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 8/50 (16%), Positives = 15/50 (30%)

Query: 14  VERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP 63
           V          D+W+VG+ +  L     P    +    L  +    +   
Sbjct: 196 VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 245

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 91.7 bits (227), Expect = 3e-22
 Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 5/128 (3%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAA---VERKGGYNQQCDIWAVG 125
           D   ++KL DFG S Q+     K +   GTP ++APE+      +   GY ++ D+W+ G
Sbjct: 144 DDDMNIKLTDFGFSCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG 202

Query: 126 ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
           +    L    PP +    M  L ++    ++     + D +S T  + V   L   P+KR
Sbjct: 203 VIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG-SPEWDDYSDTVKDLVSRFLVVQPQKR 261

Query: 186 PTADKLLQ 193
            TA++ L 
Sbjct: 262 YTAEEALA 269

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 11/63 (17%), Positives = 27/63 (42%)

Query: 7   HFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK 66
             ++ +  +   GY ++ D+W+ G+    L    PP +    M  L ++    ++  + +
Sbjct: 179 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 238

Query: 67  DKD 69
             D
Sbjct: 239 WDD 241

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 91.2 bits (226), Expect = 6e-22
 Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 5/129 (3%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
               D    + ++DFG+S       +   +  GTP ++APEV     +  Y++  D W++
Sbjct: 140 YYSLDEDSKIMISDFGLSKMEDPG-SVLSTACGTPGYVAPEVL---AQKPYSKAVDCWSI 195

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G+ A  L    PP +D +  +    + K+ ++  +    D  S +  +F++  + K+P+K
Sbjct: 196 GVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD-ISDSAKDFIRHLMEKDPEK 254

Query: 185 RPTADKLLQ 193
           R T ++ LQ
Sbjct: 255 RFTCEQALQ 263

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 11/54 (20%), Positives = 25/54 (46%)

Query: 16  RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD 69
            +  Y++  D W++G+ A  L    PP +D +  +    + K+ ++  +    D
Sbjct: 182 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD 235

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 91.3 bits (226), Expect = 1e-21
 Identities = 38/224 (16%), Positives = 69/224 (30%), Gaps = 34/224 (15%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           + +  +   VK+ DFG++ ++       K    T  + APE+     +       D+WA+
Sbjct: 159 MCETKKASSVKIIDFGLATKLNPD-EIVKVTTATAEFAAPEIV---DREPVGFYTDMWAI 214

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G+    L     P      +  L  + +  ++          S    +F+K  L K P+K
Sbjct: 215 GVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD-EDAFSSVSPEAKDFIKNLLQKEPRK 273

Query: 185 RPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYD---MSKRVAIELLQKVSN 241
           R T    L+                          HP+ K D   ++ R+      K+  
Sbjct: 274 RLTVHDALE--------------------------HPWLKGDHSNLTSRIPSSRYNKIRQ 307

Query: 242 PPTTYTDLEPDDDGEIPNVPQRIQSRLLTARNNHARNPNIDESE 285
                    P     I  +      R    +     +   D  E
Sbjct: 308 KIKEKYADWPAPQPAIGRIANFSSLRKHRPQEYQIYDSYFDRKE 351

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 7/48 (14%), Positives = 16/48 (33%)

Query: 16  RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP 63
            +       D+WA+G+    L     P      +  L  + +  ++  
Sbjct: 201 DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 248

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.9 bits (220), Expect = 3e-21
 Identities = 27/163 (16%), Positives = 55/163 (33%), Gaps = 32/163 (19%)

Query: 69  DRCGDVKLADFGVSAQITATINKR--KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           D   ++K++DFG++        +R      GT  ++APE+  ++R+  + +  D+W+ GI
Sbjct: 137 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL--LKRREFHAEPVDVWSCGI 194

Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
               +   + P          +   K   K   L    +  S     +   L +NP  R 
Sbjct: 195 VLTAMLAGELPWDQPSDSCQEYSDWKE--KKTYLNPWKKIDSAPLALLHKILVENPSARI 252

Query: 187 TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSK 229
           T   + +                            ++   + K
Sbjct: 253 TIPDIKK--------------------------DRWYNKPLKK 269

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 3e-21
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 32/177 (18%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           +    R   +K+ +FG + Q+    +  +     P + APEV    +    +   D+W++
Sbjct: 134 IYQTRRSSTIKIIEFGQARQLKPG-DNFRLLFTAPEYYAPEV---HQHDVVSTATDMWSL 189

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G     L     P       + +  +  + +       K+  S    +FV   L K  K 
Sbjct: 190 GTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKE-ISIEAMDFVDRLLVKERKS 248

Query: 185 RPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSN 241
           R TA + LQ                          HP+ K    +RV+ ++++ + +
Sbjct: 249 RMTASEALQ--------------------------HPWLK-QKIERVSTKVIRTLKH 278

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 5e-04
 Identities = 7/56 (12%), Positives = 18/56 (32%)

Query: 14  VERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD 69
           V +    +   D+W++G     L     P       + +  +  + +       K+
Sbjct: 174 VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKE 229

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.4 bits (216), Expect = 2e-20
 Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 44/164 (26%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           +  G++KL DFGVS Q+  +     SF+GT  +M+PE     +   Y+ Q DIW++G++ 
Sbjct: 139 NSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERL---QGTHYSVQSDIWSMGLSL 193

Query: 129 IELAELQPP---------------------------------------MFDLHPMRALFL 149
           +E+A  + P                                       M    PM    L
Sbjct: 194 VEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFEL 253

Query: 150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
           +     +PP       +S  F +FV   L KNP +R    +L+ 
Sbjct: 254 LDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.7 bits (214), Expect = 2e-20
 Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 35/179 (19%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
           L        +K+ DFG++ +I    N+ K+  GTP ++APE+           + D+W++
Sbjct: 147 LDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIFGTPEFVAPEIV---NYEPLGLEADMWSI 202

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           G+    L     P         L  +S   ++    +     S+   +F++  L K+PKK
Sbjct: 203 GVITYILLSGASPFLGDTKQETLANVSAVNYEFE-DEYFSNTSALAKDFIRRLLVKDPKK 261

Query: 185 RPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSNPP 243
           R T    LQ                          HP+ K     +   + L    + P
Sbjct: 262 RMTIQDSLQ--------------------------HPWIK----PKDTQQALSSAWSHP 290

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 0.003
 Identities = 7/48 (14%), Positives = 15/48 (31%)

Query: 16  RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP 63
                  + D+W++G+    L     P         L  +S   ++  
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 236

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.1 bits (210), Expect = 5e-20
 Identities = 24/127 (18%), Positives = 53/127 (41%), Gaps = 9/127 (7%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
                 K++DFG++ + ++T   + +      W APE     R+  ++ + D+W+ GI  
Sbjct: 137 SEDNVAKVSDFGLTKEASST---QDTGKLPVKWTAPEAL---REKKFSTKSDVWSFGILL 190

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E+       +   P++ +    + G+K  A    D      +  +K     +   RP+ 
Sbjct: 191 WEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP---DGCPPAVYEVMKNCWHLDAAMRPSF 247

Query: 189 DKLLQVI 195
            +L + +
Sbjct: 248 LQLREQL 254

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 10/52 (19%), Positives = 23/52 (44%)

Query: 16  RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD 67
           R+  ++ + D+W+ GI   E+       +   P++ +    + G+K  A   
Sbjct: 173 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG 224

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.5 bits (211), Expect = 6e-20
 Identities = 27/158 (17%), Positives = 60/158 (37%), Gaps = 30/158 (18%)

Query: 69  DRCGDVKLADFGVSAQIT--ATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
           +    +++ DFG +  ++  +   +  SF+GT  +++PE+     +    +  D+WA+G 
Sbjct: 142 NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL---TEKSACKSSDLWALGC 198

Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
              +L    PP    +       + K  +  P     +++     + V+  L  +  KR 
Sbjct: 199 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-----EKFFPKARDLVEKLLVLDATKRL 253

Query: 187 TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
             +++                         + AHPFF+
Sbjct: 254 GCEEMEGYG--------------------PLKAHPFFE 271

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 9/48 (18%), Positives = 17/48 (35%)

Query: 16  RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP 63
            +    +  D+WA+G    +L    PP    +       + K  +  P
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 230

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 7e-20
 Identities = 45/234 (19%), Positives = 81/234 (34%), Gaps = 49/234 (20%)

Query: 65  LKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
              K     +KL DFG + + T+  N   +   TPY++APEV        Y++ CD+W++
Sbjct: 144 YTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVL---GPEKYDKSCDMWSL 199

Query: 125 GITAIELAELQPPMFDLHPMRALFLMS---KSGFKPPALKDKDRWSSTFHNFVKIALTKN 181
           G+    L    PP +  H +     M    + G       +    S      ++  L   
Sbjct: 200 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 259

Query: 182 PKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKRVAIELLQKVSN 241
           P +R T  + +                           HP+               KV  
Sbjct: 260 PTQRMTITEFMN--------------------------HPWIMQST----------KVPQ 283

Query: 242 PPTTYTDLEPDDDGEIPNVPQRIQSRLLTARNNHARNPNIDESEVFSLPDVSAP 295
            P   + +  +D     +V + + S L T R ++      ++ ++  + D S P
Sbjct: 284 TPLHTSRVLKEDKERWEDVKEEMTSALATMRVDY------EQIKIKKIEDASNP 331

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.4 bits (208), Expect = 1e-19
 Identities = 29/132 (21%), Positives = 49/132 (37%), Gaps = 10/132 (7%)

Query: 69  DRCGDVKLADFGVSAQITATINK---RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG 125
                VK+ DFG+   +    +    ++       W APE     +   ++   D W  G
Sbjct: 145 ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL---KTRTFSHASDTWMFG 201

Query: 126 ITAIELAEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           +T  E+    Q P   L+  + L  + K G + P  +D        +N +       P+ 
Sbjct: 202 VTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED---CPQDIYNVMVQCWAHKPED 258

Query: 185 RPTADKLLQVIL 196
           RPT   L   +L
Sbjct: 259 RPTFVALRDFLL 270

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 3e-04
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 16  RKGGYNQQCDIWAVGITAIELAEL-QPPMFDLHPMRALFLMSKSGFKPPALKD 67
           +   ++   D W  G+T  E+    Q P   L+  + L  + K G + P  +D
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.0 bits (207), Expect = 2e-19
 Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 7/128 (5%)

Query: 69  DRCGDVKLADFGVSAQITAT-INKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT 127
                 K+ADFG++  I       R+       W APE A     G +  + D+W+ GI 
Sbjct: 147 GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA---LYGRFTIKSDVWSFGIL 203

Query: 128 AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT 187
             EL       +     R +    + G++ P   +      + H+ +     K P++RPT
Sbjct: 204 LTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE---CPESLHDLMCQCWRKEPEERPT 260

Query: 188 ADKLLQVI 195
            + L   +
Sbjct: 261 FEYLQAFL 268

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 7e-04
 Identities = 10/52 (19%), Positives = 20/52 (38%)

Query: 16  RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD 67
             G +  + D+W+ GI   EL       +     R +    + G++ P   +
Sbjct: 187 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 238

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.5 bits (203), Expect = 1e-18
 Identities = 36/176 (20%), Positives = 59/176 (33%), Gaps = 39/176 (22%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ADFG+  +      K  +F GTP ++APE+        YN   D W+ G+  
Sbjct: 137 DKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEIL---LGQKYNHSVDWWSFGVLL 193

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E+   Q P            +       P             + +     + P+KR   
Sbjct: 194 YEMLIGQSPFHGQDEEELFHSIRMDNPFYP-----RWLEKEAKDLLVKLFVREPEKRLGV 248

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK-YDMSKRVAIELLQKVSNPP 243
                                    + DI  HP F+  +  +     L +K  +PP
Sbjct: 249 -------------------------RGDIRQHPLFREINWEE-----LERKEIDPP 274

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.9 bits (199), Expect = 2e-18
 Identities = 27/129 (20%), Positives = 44/129 (34%), Gaps = 7/129 (5%)

Query: 69  DRCGDVKLADFGVSAQIT-ATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT 127
           +  G VK++DFG+S  +                W  PEV        ++ + DIWA G+ 
Sbjct: 134 NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL---MYSKFSSKSDIWAFGVL 190

Query: 128 AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT 187
             E+  L    ++             G +          S   +  +     +   +RPT
Sbjct: 191 MWEIYSLGKMPYERFTNSETAEHIAQGLRLY---RPHLASEKVYTIMYSCWHEKADERPT 247

Query: 188 ADKLLQVIL 196
              LL  IL
Sbjct: 248 FKILLSNIL 256

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.4 bits (200), Expect = 3e-18
 Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 8/127 (6%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKS--FIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
                VK+ DFG++  + A   +  +        WMA E         Y  Q D+W+ G+
Sbjct: 145 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI---LHRIYTHQSDVWSYGV 201

Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
           T  EL       +D  P   +  + + G + P        +   +  +      +   RP
Sbjct: 202 TVWELMTFGSKPYDGIPASEISSILEKGERLP---QPPICTIDVYMIMVKCWMIDADSRP 258

Query: 187 TADKLLQ 193
              +L+ 
Sbjct: 259 KFRELII 265

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.1 bits (197), Expect = 3e-18
 Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 7/128 (5%)

Query: 69  DRCGDVKLADFGVSAQIT-ATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT 127
                +K++DFG++  +                W +PEV        Y+ + D+W+ G+ 
Sbjct: 135 GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF---SFSRYSSKSDVWSFGVL 191

Query: 128 AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT 187
             E+       ++      +     +GF+          S+  +  +     + P+ RP 
Sbjct: 192 MWEVFSEGKIPYENRSNSEVVEDISTGFRLY---KPRLASTHVYQIMNHCWKERPEDRPA 248

Query: 188 ADKLLQVI 195
             +LL+ +
Sbjct: 249 FSRLLRQL 256

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.4 bits (195), Expect = 9e-18
 Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 15/122 (12%)

Query: 72  GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIEL 131
           G++KL DFG  A +  T+     F GT  +  PE     R  G      +W++GI   ++
Sbjct: 148 GELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGR--SAAVWSLGILLYDM 203

Query: 132 AELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL 191
                P      +               +  + R SS   + ++  L   P  RPT +++
Sbjct: 204 VCGDIPFEHDEEI-----------IRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 252

Query: 192 LQ 193
             
Sbjct: 253 QN 254

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 78.7 bits (193), Expect = 2e-17
 Identities = 23/160 (14%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 46  LHPMRALFLMSKSGFKPPALKDKDRCGDVKLADFGVSAQITATINK-------RKSFIGT 98
           +H    ++   K         +      + + DFG+       + K       +K+  GT
Sbjct: 117 IHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT 176

Query: 99  PYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFK-- 156
             +M+            +++ D+ A+G   +       P   L          + G K  
Sbjct: 177 ARYMSINTH---LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 233

Query: 157 -PPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI 195
             P  +    +   F+ ++  A        P  D L  + 
Sbjct: 234 STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLF 273

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 36.3 bits (83), Expect = 0.003
 Identities = 8/59 (13%), Positives = 18/59 (30%)

Query: 16  RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDV 74
                +++ D+ A+G   +       P   L          + G K  +   ++ C   
Sbjct: 186 LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGF 244

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 78.2 bits (192), Expect = 2e-17
 Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 8/138 (5%)

Query: 63  PALKDKDRCGDVKLADFGVSAQITATIN---KRKSFIGTPYWMAPEVAAVERKGGYNQQC 119
           PA         VK+ DFG++  I  + N   +  + IGT  +++PE A   R    + + 
Sbjct: 139 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA---RGDSVDARS 195

Query: 120 DIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALT 179
           D++++G    E+   +PP     P+   +   +    PP+ + +   S+     V  AL 
Sbjct: 196 DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG-LSADLDAVVLKALA 254

Query: 180 KNPKKRP-TADKLLQVIL 196
           KNP+ R  TA ++   ++
Sbjct: 255 KNPENRYQTAAEMRADLV 272

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 40.9 bits (95), Expect = 9e-05
 Identities = 9/54 (16%), Positives = 23/54 (42%)

Query: 16  RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD 69
           R    + + D++++G    E+   +PP     P+   +   +    PP+ + + 
Sbjct: 187 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG 240

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 78.0 bits (191), Expect = 3e-17
 Identities = 18/139 (12%), Positives = 41/139 (29%), Gaps = 13/139 (9%)

Query: 67  DKDRCGDVKLADFGVSAQITAT-------INKRKSFIGTPYWMAPEVAAVERKGGYNQQC 119
              +   V + DFG++ +             + K+  GT  + +            +++ 
Sbjct: 138 LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTH---LGIEQSRRD 194

Query: 120 DIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFK---PPALKDKDRWSSTFHNFVKI 176
           D+ ++G   +       P   L          +   K    P       + S F  ++  
Sbjct: 195 DLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNF 254

Query: 177 ALTKNPKKRPTADKLLQVI 195
             +     +P    L Q+ 
Sbjct: 255 CRSLRFDDKPDYSYLRQLF 273

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 4e-17
 Identities = 38/176 (21%), Positives = 66/176 (37%), Gaps = 35/176 (19%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG+  +  +     K+F GTP ++APEV        Y +  D W +G+  
Sbjct: 139 DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL---EDNDYGRAVDWWGLGVVM 195

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E+   + P ++    R   L+     + P        S    + +   L K+PK+R   
Sbjct: 196 YEMMCGRLPFYNQDHERLFELILMEEIRFP-----RTLSPEAKSLLAGLLKKDPKQRLGG 250

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK-YDMSKRVAIELLQKVSNPP 243
                                G +   ++  H FF   +        ++QK   PP
Sbjct: 251 ---------------------GPSDAKEVMEHRFFLSINWQD-----VVQKKLLPP 280

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (189), Expect = 5e-17
 Identities = 21/130 (16%), Positives = 42/130 (32%), Gaps = 9/130 (6%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFI---GTPYWMAPEVAAVERKGGYNQQCDIWAVG 125
           +     K++DFG+S  +        +         W APE         +    D+W+ G
Sbjct: 144 NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI---SYRKFTSASDVWSFG 200

Query: 126 ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
           I   E+       +       +      GF+ P   D     S  +  +     +   +R
Sbjct: 201 IVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMD---CPSAIYQLMMQCWQQERARR 257

Query: 186 PTADKLLQVI 195
           P    ++ ++
Sbjct: 258 PKFADIVSIL 267

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.7 bits (188), Expect = 8e-17
 Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 11/129 (8%)

Query: 69  DRCGDVKLADFGVSAQITA---TINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG 125
                 K++DFG+S  + A       +        W APE         ++ + D+W+ G
Sbjct: 141 VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI---NYYKFSSKSDVWSFG 197

Query: 126 ITAIE-LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           +   E  +  Q P   +       ++ K G +              ++ + +  T + + 
Sbjct: 198 VLMWEAFSYGQKPYRGMKGSEVTAMLEK-GERMGCPAG---CPREMYDLMNLCWTYDVEN 253

Query: 185 RPTADKLLQ 193
           RP    +  
Sbjct: 254 RPGFAAVEL 262

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 8e-17
 Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 7/127 (5%)

Query: 70  RCGDVKLADFGVSAQITAT-INKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
                K+ADFG++  I       R+       W APE       G +  + D+W+ GI  
Sbjct: 144 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI---NYGTFTIKSDVWSFGILL 200

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E+       +       +    + G++       D      +  +++   + P+ RPT 
Sbjct: 201 TEIVTHGRIPYPGMTNPEVIQNLERGYRMV---RPDNCPEELYQLMRLCWKERPEDRPTF 257

Query: 189 DKLLQVI 195
           D L  V+
Sbjct: 258 DYLRSVL 264

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.8 bits (188), Expect = 9e-17
 Identities = 30/148 (20%), Positives = 51/148 (34%), Gaps = 25/148 (16%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G +KLADFG++    +        + T ++ APE+  +     Y    D+WAVG   
Sbjct: 134 DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPEL--LFGARMYGVGVDMWAVGCIL 191

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRW---------------------- 166
            EL    P +     +  L  + ++   P   +  D                        
Sbjct: 192 AELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSA 251

Query: 167 -SSTFHNFVKIALTKNPKKRPTADKLLQ 193
                 + ++     NP  R TA + L+
Sbjct: 252 AGDDLLDLIQGLFLFNPCARITATQALK 279

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 1e-16
 Identities = 26/129 (20%), Positives = 47/129 (36%), Gaps = 9/129 (6%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFI-GTPYWMAPEVAAVERKGGYNQQCDIWAVGIT 127
                VKL DFG+S  +  +   + S       WMAPE         +    D+W  G+ 
Sbjct: 142 SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI---NFRRFTSASDVWMFGVC 198

Query: 128 AIE-LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
             E L     P   +     +  + ++G + P   +      T ++ +      +P +RP
Sbjct: 199 MWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPPN---CPPTLYSLMTKCWAYDPSRRP 254

Query: 187 TADKLLQVI 195
              +L   +
Sbjct: 255 RFTELKAQL 263

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.7 bits (188), Expect = 1e-16
 Identities = 40/198 (20%), Positives = 72/198 (36%), Gaps = 49/198 (24%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +K+ DFG +  +    +   +  GTP ++APEV        YN+  D W+ GI  
Sbjct: 138 DKNGHIKITDFGFAKYVP---DVTYTLCGTPDYIAPEVV---STKPYNKSIDWWSFGILI 191

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E+     P +D + M+    +  +  + P       ++    + +   +T++  +R   
Sbjct: 192 YEMLAGYTPFYDSNTMKTYEKILNAELRFP-----PFFNEDVKDLLSRLITRDLSQRLG- 245

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK-YDMSKRVAIELLQKVSNPP---- 243
                            E         D+  HP+FK     K     LL +    P    
Sbjct: 246 -----------NLQNGTE---------DVKNHPWFKEVVWEK-----LLSRNIETPYEPP 280

Query: 244 -------TTYTDLEPDDD 254
                  T+  D  P++D
Sbjct: 281 IQQGQGDTSQFDKYPEED 298

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 76.4 bits (187), Expect = 1e-16
 Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 8/129 (6%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKS--FIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
                VK+ADFG+S  I +    +          WM PE         Y  + D+WA G+
Sbjct: 174 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI---FYNRYTTESDVWAYGV 230

Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
              E+       +       +    + G         +      +N +++  +K P  RP
Sbjct: 231 VLWEIFSYGLQPYYGMAHEEVIYYVRDGNILA---CPENCPLELYNLMRLCWSKLPADRP 287

Query: 187 TADKLLQVI 195
           +   + +++
Sbjct: 288 SFCSIHRIL 296

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 2e-16
 Identities = 26/160 (16%), Positives = 56/160 (35%), Gaps = 14/160 (8%)

Query: 44  FDLHPMRALFLMSKSGFKPPALKDK----DRCGDVKLADFGVSAQI----TATINKRKSF 95
           F L   + +  ++   F    L  +    D    VK+ADFG++  +      +++ +   
Sbjct: 135 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 194

Query: 96  IGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGF 155
                WMA E     +   +  + D+W+ G+   EL     P +       + +    G 
Sbjct: 195 KLPVKWMALESL---QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 251

Query: 156 KPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI 195
           +       +      +  +        + RP+  +L+  I
Sbjct: 252 RLL---QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 288

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.6 bits (185), Expect = 2e-16
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 13/133 (9%)

Query: 69  DRCGDVKLADFGVSAQI-----TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWA 123
           +     K++DFG+S  +       T            W APE     +   +    D+W+
Sbjct: 162 NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI---QYRKFTSASDVWS 218

Query: 124 VGITAIELAEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNP 182
            GI   E+    + P +D+     +  + +  ++ P   D     S  H  +     K+ 
Sbjct: 219 YGIVMWEVMSYGERPYWDMTNQDVINAI-EQDYRLPPPMD---CPSALHQLMLDCWQKDR 274

Query: 183 KKRPTADKLLQVI 195
             RP   +++  +
Sbjct: 275 NHRPKFGQIVNTL 287

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.8 bits (183), Expect = 5e-16
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 9/130 (6%)

Query: 69  DRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
                VK+ DFG++  I +  N   R +      WMAPE      +G Y  + D+W+ GI
Sbjct: 198 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL---FEGIYTIKSDVWSYGI 254

Query: 127 TAIELAEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
              E+  L   P   +      + + ++GFK          +   +  ++     + +KR
Sbjct: 255 LLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMD---QPFYATEEIYIIMQSCWAFDSRKR 311

Query: 186 PTADKLLQVI 195
           P+   L   +
Sbjct: 312 PSFPNLTSFL 321

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 74.5 bits (182), Expect = 5e-16
 Identities = 30/149 (20%), Positives = 54/149 (36%), Gaps = 26/149 (17%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           +R G++K+ADFG++      + K    I T ++ AP+V  +     Y+   DIW+VG   
Sbjct: 134 NREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDV--LMGSKKYSTTIDIWSVGCIF 191

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKP------------------------PALKDKD 164
            E+    P    +     L  + +    P                        P      
Sbjct: 192 AEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLK 251

Query: 165 RWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
               +  + +   L  +P +R TA + L+
Sbjct: 252 GLDESGIDLLSKMLKLDPNQRITAKQALE 280

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.5 bits (182), Expect = 6e-16
 Identities = 33/189 (17%), Positives = 53/189 (28%), Gaps = 59/189 (31%)

Query: 69  DRCGDVKLADFGVSAQI----TATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAV 124
            R G +KLADFG++        +  N+  + + T ++  PE+   ER   Y    D+W  
Sbjct: 151 TRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGER--DYGPPIDLWGA 208

Query: 125 GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD-------------------- 164
           G    E+    P M        L L+S+           +                    
Sbjct: 209 GCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKV 268

Query: 165 -------RWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDI 217
                         + +   L  +P +R  +D  L                         
Sbjct: 269 KDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN------------------------ 304

Query: 218 WAHPFFKYD 226
             H FF  D
Sbjct: 305 --HDFFWSD 311

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 0.003
 Identities = 10/47 (21%), Positives = 15/47 (31%)

Query: 17  KGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP 63
           +  Y    D+W  G    E+    P M        L L+S+      
Sbjct: 196 ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 242

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (181), Expect = 7e-16
 Identities = 22/127 (17%), Positives = 45/127 (35%), Gaps = 7/127 (5%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
                 K+ADFG+ ++      K+        WMA E         Y    D+W+ G+  
Sbjct: 161 GENYVAKIADFGL-SRGQEVYVKKTMGRLPVRWMAIESL---NYSVYTTNSDVWSYGVLL 216

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            E+  L    +       L+     G++              ++ ++    + P +RP+ 
Sbjct: 217 WEIVSLGGTPYCGMTCAELYEKLPQGYRLE---KPLNCDDEVYDLMRQCWREKPYERPSF 273

Query: 189 DKLLQVI 195
            ++L  +
Sbjct: 274 AQILVSL 280

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.4 bits (179), Expect = 1e-15
 Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 8/129 (6%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKS--FIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
                +K+ADFG++  I      +K+        WMAPE         Y  Q D+W+ G+
Sbjct: 169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL---FDRIYTHQSDVWSFGV 225

Query: 127 TAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP 186
              E+  L    +   P+  LF + K G +          ++  +  ++      P +RP
Sbjct: 226 LLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD---KPSNCTNELYMMMRDCWHAVPSQRP 282

Query: 187 TADKLLQVI 195
           T  +L++ +
Sbjct: 283 TFKQLVEDL 291

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 6e-04
 Identities = 12/48 (25%), Positives = 20/48 (41%)

Query: 16  RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP 63
               Y  Q D+W+ G+   E+  L    +   P+  LF + K G +  
Sbjct: 210 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 257

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 73.6 bits (180), Expect = 2e-15
 Identities = 34/205 (16%), Positives = 72/205 (35%), Gaps = 43/205 (20%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D  G V+++D G++   +    K  + +GT  +MAPEV  +++   Y+   D +++G   
Sbjct: 141 DEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEV--LQKGVAYDSSADWFSLGCML 196

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
            +L     P F  H  +    + +       ++  D +S    + ++  L ++  +R   
Sbjct: 197 FKLLRGHSP-FRQHKTKDKHEIDRMTLTMA-VELPDSFSPELRSLLEGLLQRDVNRRLGC 254

Query: 189 DKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK-YDMSKRVAIELLQKVSNPP---- 243
                       R A            ++   PFF+  D        +  +   PP    
Sbjct: 255 ----------LGRGAQ-----------EVKESPFFRSLDWQM-----VFLQKYPPPLIPP 288

Query: 244 ------TTYTDLEPDDDGEIPNVPQ 262
                     D+   D+ +   +  
Sbjct: 289 RGEVNAADAFDIGSFDEEDTKGIKL 313

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 71.7 bits (175), Expect = 5e-15
 Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 7/128 (5%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFI-GTPYWMAPEVAAVERKGGYNQQCDIWAVGIT 127
                VK+ADFG+S  +T       +       W APE         ++ + D+WA G+ 
Sbjct: 149 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL---AYNKFSIKSDVWAFGVL 205

Query: 128 AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT 187
             E+A      +    +  ++ + +  ++    +         +  ++     NP  RP+
Sbjct: 206 LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG---CPEKVYELMRACWQWNPSDRPS 262

Query: 188 ADKLLQVI 195
             ++ Q  
Sbjct: 263 FAEIHQAF 270

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 5e-15
 Identities = 23/131 (17%), Positives = 46/131 (35%), Gaps = 11/131 (8%)

Query: 69  DRCGDVKLADFGVSAQITA---TINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG 125
                 K++DFG+S  + A       R +      W APE         ++ + D+W+ G
Sbjct: 143 VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI---NFRKFSSRSDVWSYG 199

Query: 126 ITAIE-LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKK 184
           +T  E L+  Q P   +     +  + + G +     +        +  +        + 
Sbjct: 200 VTMWEALSYGQKPYKKMKGPEVMAFI-EQGKRMECPPE---CPPELYALMSDCWIYKWED 255

Query: 185 RPTADKLLQVI 195
           RP    + Q +
Sbjct: 256 RPDFLTVEQRM 266

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.4 bits (171), Expect = 1e-14
 Identities = 28/150 (18%), Positives = 57/150 (38%), Gaps = 27/150 (18%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           +R G++KLA+FG++      +    + + T ++  P+V        Y+   D+W+ G   
Sbjct: 135 NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLF--GAKLYSTSIDMWSAGCIF 192

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKD------------------------ 164
            ELA    P+F  + +             P  +                           
Sbjct: 193 AELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVV 252

Query: 165 -RWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
            + ++T  + ++  L  NP +R +A++ LQ
Sbjct: 253 PKLNATGRDLLQNLLKCNPVQRISAEEALQ 282

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.3 bits (171), Expect = 2e-14
 Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 24/151 (15%)

Query: 69  DRCGDVKLADFGVSAQITATIN----KRKSFIGTPYWMAPEVA---AVERKGGYNQQCDI 121
            + G   +AD G++ +  +  +         +GT  +MAPEV       +     ++ DI
Sbjct: 142 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 201

Query: 122 WAVGITAIELA----------ELQPPMFDLHP-------MRALFLMSKSGFKPPALKDKD 164
           +A+G+   E+A          + Q P +DL P       MR +    K     P      
Sbjct: 202 YAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC 261

Query: 165 RWSSTFHNFVKIALTKNPKKRPTADKLLQVI 195
                    ++     N   R TA ++ + +
Sbjct: 262 EALRVMAKIMRECWYANGAARLTALRIKKTL 292

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.9 bits (170), Expect = 2e-14
 Identities = 26/149 (17%), Positives = 49/149 (32%), Gaps = 26/149 (17%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           +  G +KLADFG++      +      + T ++ APE+        Y+   DIW++G   
Sbjct: 136 NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL--GCKYYSTAVDIWSLGCIF 193

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRW---------------------- 166
            E+   +        +  LF + ++   P  +                            
Sbjct: 194 AEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVP 253

Query: 167 --SSTFHNFVKIALTKNPKKRPTADKLLQ 193
                  + +   L  +P KR +A   L 
Sbjct: 254 PLDEDGRSLLSQMLHYDPNKRISAKAALA 282

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (169), Expect = 3e-14
 Identities = 34/147 (23%), Positives = 50/147 (34%), Gaps = 26/147 (17%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
              G +KLADFG  A+I +      S + T ++ APEV     +  Y    D+W+VG   
Sbjct: 150 TSSGQIKLADFG-LARIYSFQMALTSVVVTLWYRAPEVL---LQSSYATPVDLWSVGCIF 205

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKP----------------------PALKDKDRW 166
            E+   +P       +  L  +      P                      P  K     
Sbjct: 206 AEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDI 265

Query: 167 SSTFHNFVKIALTKNPKKRPTADKLLQ 193
                + +   LT NP KR +A   L 
Sbjct: 266 DELGKDLLLKCLTFNPAKRISAYSALS 292

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (168), Expect = 4e-14
 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 10/130 (7%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKS--FIGTPYWMAPEVAAVERKGGYNQQCDIWAVGI 126
                VK+ DFG++  I  T   RK    +    WM+PE     + G +    D+W+ G+
Sbjct: 167 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL---KDGVFTTYSDVWSFGV 223

Query: 127 TAIELAEL-QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR 185
              E+A L + P   L   + L  + + G         D         +++    NPK R
Sbjct: 224 VLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP----DNCPDMLFELMRMCWQYNPKMR 279

Query: 186 PTADKLLQVI 195
           P+  +++  I
Sbjct: 280 PSFLEIISSI 289

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.4 bits (166), Expect = 6e-14
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 13/188 (6%)

Query: 15  ERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDK----DR 70
             K        +    +    L       +     + +  ++        L  +      
Sbjct: 110 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 169

Query: 71  CGDVKLADFGVSAQITA--TINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
              VK+ DFG++  I       ++        WMAPE         Y  Q D+W+ G+  
Sbjct: 170 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI---FDRVYTIQSDVWSFGVLL 226

Query: 129 IE-LAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT 187
            E  +    P   +          K G +  A    D  +   +  +       P +RPT
Sbjct: 227 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA---PDYTTPEMYQTMLDCWHGEPSQRPT 283

Query: 188 ADKLLQVI 195
             +L++ +
Sbjct: 284 FSELVEHL 291

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.3 bits (166), Expect = 1e-13
 Identities = 26/158 (16%), Positives = 36/158 (22%), Gaps = 27/158 (17%)

Query: 60  FKPPALKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQC 119
            KP  L        +KL DFG + Q+              Y     +        Y    
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF---GATDYTSSI 204

Query: 120 DIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPP--------------------- 158
           D+W+ G    EL   QP       +  L  + K    P                      
Sbjct: 205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA 264

Query: 159 ---ALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
                  + R            L   P  R T  +   
Sbjct: 265 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 0.004
 Identities = 12/64 (18%), Positives = 20/64 (31%)

Query: 16  RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRCGDVK 75
               Y    D+W+ G    EL   QP       +  L  + K    P   + ++   +  
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255

Query: 76  LADF 79
              F
Sbjct: 256 EFKF 259

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (162), Expect = 3e-13
 Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 24/157 (15%)

Query: 69  DRCGDVKLADFGVSAQITATINKR-KSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGIT 127
           D  G V L DFG+S +  A   +R   F GT  +MAP++      G +++  D W++G+ 
Sbjct: 163 DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSG-HDKAVDWWSLGVL 221

Query: 128 AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT 187
             EL     P        +   +S+   K          S+   + ++  L K+PKKR  
Sbjct: 222 MYELLTGASPFTVDGEKNSQAEISRRILKSE-PPYPQEMSALAKDLIQRLLMKDPKKRLG 280

Query: 188 ADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFK 224
                                 G     +I  H FF+
Sbjct: 281 C---------------------GPRDADEIKEHLFFQ 296

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (161), Expect = 4e-13
 Identities = 33/154 (21%), Positives = 55/154 (35%), Gaps = 31/154 (20%)

Query: 69  DRCGDVKLADFGVSAQIT---ATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVG 125
           +   D+K+ DFG++               ++ T ++ APE+  +    GY +  DIW+VG
Sbjct: 143 NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI--MLNSKGYTKSIDIWSVG 200

Query: 126 ITAIELAELQPPMFDLHPMRALFLMSKSGFKPPAL-------------------KDKDRW 166
               E+   +P     H +  L  +      P                      K+K  W
Sbjct: 201 CILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPW 260

Query: 167 SSTFHN-------FVKIALTKNPKKRPTADKLLQ 193
           +  F N        +   LT NP KR   ++ L 
Sbjct: 261 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.2 bits (158), Expect = 8e-13
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 9/127 (7%)

Query: 72  GDVKLADFGVSAQITATINKRKS--FIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAI 129
              K+ DFG++  I    N            WMAPE         Y  + D+W+ GI   
Sbjct: 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLW 238

Query: 130 ELAELQPPMF-DLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTA 188
           EL  L    +  +      + M K GF+       +   +  ++ +K     +P KRPT 
Sbjct: 239 ELFSLGSSPYPGMPVDSKFYKMIKEGFRML---SPEHAPAEMYDIMKTCWDADPLKRPTF 295

Query: 189 DKLLQVI 195
            +++Q+I
Sbjct: 296 KQIVQLI 302

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.7 bits (154), Expect = 4e-12
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 16/130 (12%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           D+ G +++ DFG + ++     +  +  GTP  +APE+       GYN+  D WA+G+  
Sbjct: 175 DQQGYIQVTDFGFAKRV---KGRTWTLCGTPEALAPEII---LSKGYNKAVDWWALGVLI 228

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKR--- 185
            E+A   PP F   P++    +     + P       +SS   + ++  L  +  KR   
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLLRNLLQVDLTKRFGN 283

Query: 186 --PTADKLLQ 193
                + +  
Sbjct: 284 LKNGVNDIKN 293

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 62.2 bits (150), Expect = 1e-11
 Identities = 23/167 (13%), Positives = 49/167 (29%), Gaps = 36/167 (21%)

Query: 60  FKPPALKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQC 119
            KP  +        ++L D+G++        +    + + Y+  PE+  +     Y+   
Sbjct: 155 VKPHNVMIDHEHRKLRLIDWGLAEFYHPG-QEYNVRVASRYFKGPEL--LVDYQMYDYSL 211

Query: 120 DIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDK---------------- 163
           D+W++G     +   + P F  H      +          L D                 
Sbjct: 212 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDIL 271

Query: 164 -----------------DRWSSTFHNFVKIALTKNPKKRPTADKLLQ 193
                               S    +F+   L  + + R TA + ++
Sbjct: 272 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (137), Expect = 5e-10
 Identities = 31/151 (20%), Positives = 57/151 (37%), Gaps = 31/151 (20%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           +   ++K+ DFG++ Q     ++   ++ T ++ APEV        Y Q  DIW+VG   
Sbjct: 155 NEDCELKILDFGLARQAD---SEMTGYVVTRWYRAPEVIL--NWMRYTQTVDIWSVGCIM 209

Query: 129 IELAELQPPMFDLHPMRALFLMSKSGFKPPA-------------------LKDKDRWSST 169
            E+   +        +  L  + K    PPA                     +K  ++S 
Sbjct: 210 AEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASI 269

Query: 170 FHN-------FVKIALTKNPKKRPTADKLLQ 193
             N        ++  L  + ++R TA + L 
Sbjct: 270 LTNASPLAVNLLEKMLVLDAEQRVTAGEALA 300

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.8 bits (136), Expect = 7e-10
 Identities = 32/157 (20%), Positives = 57/157 (36%), Gaps = 31/157 (19%)

Query: 63  PALKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIW 122
           P+    +   ++K+ DFG++       ++   ++ T ++ APE+        YNQ  DIW
Sbjct: 149 PSNLAVNEDCELKILDFGLARHTD---DEMTGYVATRWYRAPEIML--NWMHYNQTVDIW 203

Query: 123 AVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIA----- 177
           +VG    EL   +        +  L L+ +    P A   K   S +  N+++       
Sbjct: 204 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 263

Query: 178 ---------------------LTKNPKKRPTADKLLQ 193
                                L  +  KR TA + L 
Sbjct: 264 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 300

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 2e-09
 Identities = 31/168 (18%), Positives = 51/168 (30%), Gaps = 41/168 (24%)

Query: 63  PALKDKDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIW 122
           P+         +K+ DFG+ A+   T      ++ T Y+ APEV       GY +  DIW
Sbjct: 147 PSNIVVKSDCTLKILDFGL-ARTAGTSFMMTPYVVTRYYRAPEVI---LGMGYKENVDIW 202

Query: 123 AVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKDKDRW---------------- 166
           +VG    E+   +        +     + +    P     K                   
Sbjct: 203 SVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGL 262

Query: 167 ---------------------SSTFHNFVKIALTKNPKKRPTADKLLQ 193
                                +S   + +   L  +P KR + D  LQ
Sbjct: 263 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.1 bits (100), Expect = 2e-05
 Identities = 25/168 (14%), Positives = 45/168 (26%), Gaps = 49/168 (29%)

Query: 69  DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITA 128
           +    +K+AD G +           + I T  + +PEV        +    DIW+     
Sbjct: 166 ENLIQIKIADLGNACW---YDEHYTNSIQTREYRSPEVL---LGAPWGCGADIWSTACLI 219

Query: 129 IELAELQPP---------------------------------------MFDLHPMRALFL 149
            EL                                              F+   +     
Sbjct: 220 FELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNIS 279

Query: 150 MSKSGFKPPALKDKDRW----SSTFHNFVKIALTKNPKKRPTADKLLQ 193
             K       L +K ++    +    +F+   L  +P+KR  A  L+ 
Sbjct: 280 KLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 327

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	302
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.97
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.47
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	82.91

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-47  Score=326.26  Aligned_cols=183  Identities=34%  Similarity=0.583  Sum_probs=161.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|||||||+||+|. +++..+    .+++.+++.+++||+.||.|||++||+||||||    ++.+|
T Consensus        79 Iv~~~~~~~~~~~~~ivmEy~~gg~L~-~~~~~~----~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~  153 (293)
T d1yhwa1          79 IVNYLDSYLVGDELWVVMEYLAGGSLT-DVVTET----CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG  153 (293)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTCBHH-HHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             EeeEeEEEEECCEEEEEEEecCCCcHH-HHhhcc----CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCC
Confidence            688888776    58999999999999 776654    599999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+|+.+..........+||+.|+|||++.   +..|+.++||||+||++|+|++|..||.+.+.......+..
T Consensus       154 ~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~  230 (293)
T d1yhwa1         154 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT---RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT  230 (293)
T ss_dssp             CEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHS---SSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             cEeeccchhheeeccccccccccccCCCccChhhhc---CCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHh
Confidence            999999999998766545556778999999999996   66789999999999999999999999999888888777766


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...  +....+..++..+++||.+||..||.+|||+.++|+
T Consensus       231 ~~~--~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         231 NGT--PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             HCS--CCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCC--CCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            543  233445678999999999999999999999999999

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-47  Score=332.29  Aligned_cols=193  Identities=21%  Similarity=0.298  Sum_probs=171.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|+|||||+||+|. .++...+   .+++..++.+++||+.||+|||++||+||||||    ++.+|
T Consensus        67 Iv~l~~~~~~~~~~~iv~ey~~gg~L~-~~~~~~~---~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g  142 (337)
T d1o6la_          67 LTALKYAFQTHDRLCFVMEYANGGELF-FHLSRER---VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG  142 (337)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHH-HHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             EEEEEeeeccccccccceeccCCCchh-hhhhccc---CCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCC
Confidence            678888776    58999999999999 7787777   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+|+............+||+.|||||++.   +..|+.++|||||||++|+|++|++||.+.+.......+..
T Consensus       143 ~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~---~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~  219 (337)
T d1o6la_         143 HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM  219 (337)
T ss_dssp             CEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGS---SSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CEEEeecccccccccCCcccccceeCHHHhhhhhcc---CCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhc
Confidence            999999999987765545566789999999999996   67799999999999999999999999999999888888877


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC-----HHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT-----ADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t-----~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      .....     +..+|+++++||.+||+.||.+|++     ++++++                          ||||+...
T Consensus       220 ~~~~~-----p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~--------------------------Hp~f~~i~  268 (337)
T d1o6la_         220 EEIRF-----PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME--------------------------HRFFLSIN  268 (337)
T ss_dssp             CCCCC-----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT--------------------------SGGGTTCC
T ss_pred             CCCCC-----CccCCHHHHHHHHhhccCCchhhcccccccHHHHHc--------------------------CcccccCC
Confidence            65443     3668999999999999999999995     889999                          99999776


Q ss_pred             hhHH
Q psy3574         228 SKRV  231 (302)
Q Consensus       228 ~~~~  231 (302)
                      |...
T Consensus       269 ~~~l  272 (337)
T d1o6la_         269 WQDV  272 (337)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6543

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-47  Score=323.75  Aligned_cols=179  Identities=19%  Similarity=0.272  Sum_probs=159.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.+.    .|||||||+||+|. +++...+   .+++..++.++.||+.||+|||++||+||||||    ++.+|
T Consensus        68 Iv~~~~~~~~~~~~~ivmEy~~~g~L~-~~l~~~~---~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~  143 (263)
T d2j4za1          68 ILRLYGYFHDATRVYLILEYAPLGTVY-RELQKLS---KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG  143 (263)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             CCeEEEEEEECCEEEEEEeecCCCcHH-HHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCC
Confidence            688888876    58999999999999 7887776   799999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+|+.....  .....+||+.|||||++.   +..|+.++|||||||++|+|++|+.||.+.+.......+..
T Consensus       144 ~~kl~DFG~a~~~~~~--~~~~~~Gt~~Y~APE~~~---~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~  218 (263)
T d2j4za1         144 ELKIADFGWSVHAPSS--RRTTLCGTLDYLPPEMIE---GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR  218 (263)
T ss_dssp             CEEECCCCSCSCCCCC--CCEETTEEGGGCCHHHHT---TCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred             CEeecccceeeecCCC--cccccCCCCcccCHHHHc---CCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            9999999999876543  334568999999999996   66789999999999999999999999999888888888777


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....     +..+++++++||.+||+.||++|||++++|+
T Consensus       219 ~~~~~-----p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         219 VEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             TCCCC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCC-----CccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            65433     3568999999999999999999999999999

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-47  Score=328.38  Aligned_cols=199  Identities=16%  Similarity=0.245  Sum_probs=169.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|+|||||+||+|. +++...+   .+++..++.++.|++.||+|||++||+||||||    ++.+|
T Consensus        70 Iv~l~~~~~~~~~~~ivmEy~~gg~L~-~~~~~~~---~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~  145 (288)
T d1uu3a_          70 FVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIG---SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM  145 (288)
T ss_dssp             BCCEEEEEECSSEEEEEECCCTTEEHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS
T ss_pred             eeEEEEEEEECCEEEEEEEccCCCCHH-HhhhccC---CCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCc
Confidence            678888876    59999999999999 7777777   799999999999999999999999999999999    88899


Q ss_pred             CEEEecccccccccccc--ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATI--NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||+|+.+....  ....+.+||+.|||||++.   +..|+.++|||||||++|+|++|..||.+.+.......+
T Consensus       146 ~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~---~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i  222 (288)
T d1uu3a_         146 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI  222 (288)
T ss_dssp             CEEECCCTTCEECC----------CCCCGGGCCHHHHH---TCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             eEEecccccceecccCCcccccccccCCccccCceeec---cCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHH
Confidence            99999999998775432  2334568999999999995   677999999999999999999999999999888888888


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccchhhH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDMSKR  230 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~~~~  230 (302)
                      .......     +..+++++++||.+||+.||.+|||++|++++.++..                    ||||++..|..
T Consensus       223 ~~~~~~~-----p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~--------------------Hpff~~i~w~~  277 (288)
T d1uu3a_         223 IKLEYDF-----PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA--------------------HPFFESVTWEN  277 (288)
T ss_dssp             HTTCCCC-----CTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHT--------------------SGGGTTCCCTT
T ss_pred             HcCCCCC-----CccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHc--------------------CCccCCCCHHH
Confidence            7765433     3568999999999999999999999999877555544                    99999877754


Q ss_pred             H
Q psy3574         231 V  231 (302)
Q Consensus       231 ~  231 (302)
                      +
T Consensus       278 l  278 (288)
T d1uu3a_         278 L  278 (288)
T ss_dssp             G
T ss_pred             h
Confidence            4

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-47  Score=324.37  Aligned_cols=187  Identities=41%  Similarity=0.652  Sum_probs=161.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++|+.|.    .|+|||||+||+|. +++.. ..   ++++.+++.++.||+.||.|||++||+||||||    ++.+
T Consensus        71 Iv~l~~~~~~~~~~~lvmEy~~~g~L~-~~~~~~~~---~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~  146 (288)
T d2jfla1          71 IVKLLDAFYYENNLWILIEFCAGGAVD-AVMLELER---PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLD  146 (288)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTEEHH-HHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             CCeEEEEEeeCCeEEEEEecCCCCcHH-HHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCC
Confidence            688888777    58999999999999 66544 44   799999999999999999999999999999999    8889


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhccccc--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE--RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      |.+||+|||+|+..........+.+||+.|||||++.+.  ....|+.++|||||||++|+|++|++||.+.+..+.+..
T Consensus       147 ~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~  226 (288)
T d2jfla1         147 GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLK  226 (288)
T ss_dssp             SCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH
T ss_pred             CCEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHH
Confidence            999999999998776544445567899999999998532  245689999999999999999999999999888888888


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +....  ++....+..+++++++||.+||+.||.+|||+.++++
T Consensus       227 i~~~~--~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         227 IAKSE--PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             HHHSC--CCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHcCC--CCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            77764  3334445678999999999999999999999999999

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-46  Score=327.03  Aligned_cols=181  Identities=19%  Similarity=0.275  Sum_probs=161.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|||||||+||+|. +++...+   .+++.+++.++.||+.||+|||++||+||||||    ++..|
T Consensus        65 Iv~~~~~~~~~~~~yivmEy~~~g~L~-~~i~~~~---~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~  140 (320)
T d1xjda_          65 LTHMFCTFQTKENLFFVMEYLNGGDLM-YHIQSCH---KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG  140 (320)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             EEEEEEEEccCCceeEEEeecCCCcHH-HHhhccC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCC
Confidence            688888877    59999999999999 8888777   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+++............+||+.|+|||++.   +..|+.++||||+||++|+|++|+.||.+.+.......+..
T Consensus       141 ~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~  217 (320)
T d1xjda_         141 HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILL---GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM  217 (320)
T ss_dssp             CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHT---TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             ceeccccchhhhcccccccccccCCCCCcCCHHHHc---CCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            999999999987766545556678999999999996   67799999999999999999999999999998888888876


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHH-HHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTAD-KLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~-~ll~  193 (302)
                      .....     +..+++++.+||.+||..||.+||++. ++++
T Consensus       218 ~~~~~-----p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         218 DNPFY-----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             CCCCC-----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             CCCCC-----CccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence            54332     356899999999999999999999985 6888

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.1e-46  Score=322.68  Aligned_cols=184  Identities=22%  Similarity=0.292  Sum_probs=149.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-------CC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-------KD   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-------~~   69 (302)
                      ||++|+.|.    +|||||||+||+|. +++...+   .+++.+++.++.||+.||+|||++||+||||||       .+
T Consensus        69 Iv~l~~~~~~~~~~~lvmE~~~gg~L~-~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~  144 (307)
T d1a06a_          69 IVALDDIYESGGHLYLIMQLVSGGELF-DRIVEKG---FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD  144 (307)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHHTCS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS
T ss_pred             CCcEEEEEEECCEEEEEEeccCCCcHH-Hhhhccc---CCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccC
Confidence            688888777    59999999999999 7887776   899999999999999999999999999999999       25


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      .++.+||+|||+|+..... ....+.+||+.|||||++.   +..|+.++|||||||++|+|++|.+||.+.........
T Consensus       145 ~~~~vkl~DFG~a~~~~~~-~~~~~~~GT~~y~APE~~~---~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~  220 (307)
T d1a06a_         145 EDSKIMISDFGLSKMEDPG-SVLSTACGTPGYVAPEVLA---QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ  220 (307)
T ss_dssp             TTCCEEECCC-------------------CTTSCHHHHT---TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             CCceEEEeccceeEEccCC-CeeeeeeeCccccCcHHHc---CCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            6799999999999876543 3345678999999999996   66799999999999999999999999999988888888


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+. .....+++++.+||.+||..||++|||+.|+++
T Consensus       221 i~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         221 ILKAEYEFDS-PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             HHTTCCCCCT-TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HhccCCCCCC-ccccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            8776654432 234678999999999999999999999999999

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-46  Score=320.58  Aligned_cols=184  Identities=18%  Similarity=0.227  Sum_probs=152.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    .|||||||+||+|. +++...+   .+++.+++.++.||+.||+|||++||+||||||    ++.++
T Consensus        65 Iv~~~~~~~~~~~~~ivmEy~~gg~L~-~~l~~~~---~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~  140 (271)
T d1nvra_          65 VVKFYGHRREGNIQYLFLEYCSGGELF-DRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD  140 (271)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTEEGG-GGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             EeeEeeeeccCceeEEEEeccCCCcHH-HHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCC
Confidence            688888877    58999999999999 7776666   799999999999999999999999999999999    78889


Q ss_pred             CEEEecccccccccccc--ccccccccCcccchhhcccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          73 DVKLADFGVSAQITATI--NKRKSFIGTPYWMAPEVAAVERKGGY-NQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      .+||+|||+|+......  ......+||+.|||||++.   +..+ +.++||||+||++|+|++|++||...........
T Consensus       141 ~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~---~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~  217 (271)
T d1nvra_         141 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS  217 (271)
T ss_dssp             CEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHH---CSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHH
T ss_pred             CEEEccchhheeeccCCccccccceeeCcCccCHhHhc---CCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHH
Confidence            99999999998765432  2345678999999999995   4444 6889999999999999999999977654433333


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .......  .......+++++.+||.+||+.||++|||++++++
T Consensus       218 ~~~~~~~--~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         218 DWKEKKT--YLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             HHHTTCT--TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHhcCCC--CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            3332211  12224568999999999999999999999999999

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-45  Score=314.31  Aligned_cols=181  Identities=20%  Similarity=0.275  Sum_probs=152.6

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCC--CCCCCCcC---
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSG--FKPPALKD---   67 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--i~Hrdlkp---   67 (302)
                      |||+|+.|.        +|||||||+||+|. +++....   .+++..++.++.||+.||+|||+++  |+||||||   
T Consensus        70 Iv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~-~~l~~~~---~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NI  145 (270)
T d1t4ha_          70 IVRFYDSWESTVKGKKCIVLVTELMTSGTLK-TYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNI  145 (270)
T ss_dssp             BCCEEEEEEEESSSCEEEEEEEECCCSCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGE
T ss_pred             eeeEEEEEeeccccCCEEEEEEeCCCCCcHH-HHHhccc---cccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhc
Confidence            688998764        48999999999999 7887776   7999999999999999999999998  99999999   


Q ss_pred             -C-CCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          68 -K-DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        68 -~-~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                       + +.++.+||+|||+|+.....  ...+.+||+.|||||++.    ..|+.++|||||||++|+|++|+.||.+.....
T Consensus       146 Ll~~~~~~~Kl~DFGla~~~~~~--~~~~~~GT~~Y~aPE~~~----~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~  219 (270)
T d1t4ha_         146 FITGPTGSVKIGDLGLATLKRAS--FAKAVIGTPEFMAPEMYE----EKYDESVDVYAFGMCMLEMATSEYPYSECQNAA  219 (270)
T ss_dssp             EESSTTSCEEECCTTGGGGCCTT--SBEESCSSCCCCCGGGGG----TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH
T ss_pred             eeeCCCCCEEEeecCcceeccCC--ccCCcccCccccCHHHhC----CCCCCcCchhhHHHHHHHHHHCCCCCCCcccHH
Confidence             5 45789999999999765432  334678999999999984    359999999999999999999999998766555


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+......+..++  ..+..+++++.+||.+||..||++|||++|+|+
T Consensus       220 ~~~~~i~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         220 QIYRRVTSGVKPA--SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             HHHHHHTTTCCCG--GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHcCCCCc--ccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            5544444433322  224557899999999999999999999999999

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.7e-45  Score=320.94  Aligned_cols=191  Identities=19%  Similarity=0.294  Sum_probs=168.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    .|+||||+.||+|. .++...+   .+++..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus       103 Iv~~~~~~~~~~~~~~v~e~~~~g~l~-~~l~~~~---~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g  178 (350)
T d1rdqe_         103 LVKLEFSFKDNSNLYMVMEYVAGGEMF-SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG  178 (350)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHH-HHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             Eeecccccccccccccccccccccchh-hhHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCC
Confidence            578888776    48999999999999 7776666   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      ++||+|||+|+.+...   ..+.+||+.|||||++.   +..|+.++|||||||++|+|++|++||.+.+.......+..
T Consensus       179 ~ikL~DFG~a~~~~~~---~~~~~Gt~~Y~APE~~~---~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~  252 (350)
T d1rdqe_         179 YIQVTDFGFAKRVKGR---TWTLCGTPEALAPEIIL---SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS  252 (350)
T ss_dssp             CEEECCCTTCEECSSC---BCCCEECGGGCCHHHHT---TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CEEeeeceeeeecccc---cccccCccccCCHHHHc---CCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhc
Confidence            9999999999887643   34568999999999996   67789999999999999999999999999998888888877


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      .....     +..+++++.+||++||..||.+|+     |++++++                          ||||++..
T Consensus       253 ~~~~~-----p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~--------------------------Hp~f~~~~  301 (350)
T d1rdqe_         253 GKVRF-----PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN--------------------------HKWFATTD  301 (350)
T ss_dssp             CCCCC-----CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT--------------------------SGGGTTCC
T ss_pred             CCCCC-----CccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc--------------------------CccccCCC
Confidence            65443     356899999999999999999995     8999999                          99999877


Q ss_pred             hhHHH
Q psy3574         228 SKRVA  232 (302)
Q Consensus       228 ~~~~~  232 (302)
                      |....
T Consensus       302 ~~~~~  306 (350)
T d1rdqe_         302 WIAIY  306 (350)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            65443

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.6e-45  Score=319.11  Aligned_cols=182  Identities=32%  Similarity=0.551  Sum_probs=159.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    .|+|||||.||+|. .++..+.   ++++.+++.++.||+.||.|||++||+||||||    ++.+|
T Consensus        77 Iv~~~~~~~~~~~~~iv~E~~~~g~l~-~~~~~~~---~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~  152 (309)
T d1u5ra_          77 TIQYRGCYLREHTAWLVMEYCLGSASD-LLEVHKK---PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG  152 (309)
T ss_dssp             BCCEEEEEEETTEEEEEEECCSEEHHH-HHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT
T ss_pred             EeeEEEEEEECCEEEEEEEecCCCchH-HHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCC
Confidence            688888776    58999999999997 6666666   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+|+.....    ...+||+.|||||++.+.....|+.++|||||||++|+|++|..||.+.+.......+..
T Consensus       153 ~~Kl~DFG~a~~~~~~----~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~  228 (309)
T d1u5ra_         153 LVKLGDFGSASIMAPA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ  228 (309)
T ss_dssp             EEEECCCTTCBSSSSB----CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             CEEEeecccccccCCC----CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            9999999999865432    356899999999999644445689999999999999999999999999988888888777


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .......   ...+++++.+||.+||+.||.+|||++++|+
T Consensus       229 ~~~~~~~---~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         229 NESPALQ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             SCCCCCS---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCCCC---CCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            6543322   3568999999999999999999999999999

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.9e-45  Score=318.59  Aligned_cols=190  Identities=19%  Similarity=0.348  Sum_probs=168.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|+|||||+||+|. .++..+.   .+++..++.++.||+.||+|||++||+||||||    ++.+|
T Consensus        66 Iv~~~~~~~~~~~~~ivmE~~~gg~l~-~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g  141 (316)
T d1fota_          66 IIRMWGTFQDAQQIFMIMDYIEGGELF-SLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG  141 (316)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTS
T ss_pred             hhheeeeEeeCCeeeeEeeecCCcccc-ccccccc---cccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCC
Confidence            688888877    49999999999999 7777777   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+|+.....   ..+.+||+.|||||++.   +..|+.++|||||||++|+|++|+.||.+.+..+....+..
T Consensus       142 ~vkL~DFG~a~~~~~~---~~~~~Gt~~Y~APE~l~---~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~  215 (316)
T d1fota_         142 HIKITDFGFAKYVPDV---TYTLCGTPDYIAPEVVS---TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN  215 (316)
T ss_dssp             CEEECCCSSCEECSSC---BCCCCSCTTTCCHHHHT---TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH
T ss_pred             CEEEecCccceEeccc---cccccCcccccCHHHHc---CCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHc
Confidence            9999999999876543   34578999999999995   66799999999999999999999999999999888888887


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      .....     +..+++++.++|.+||..||.+|+     |++++++                          ||||++..
T Consensus       216 ~~~~~-----p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~--------------------------Hp~f~~i~  264 (316)
T d1fota_         216 AELRF-----PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN--------------------------HPWFKEVV  264 (316)
T ss_dssp             CCCCC-----CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT--------------------------SGGGSSCC
T ss_pred             CCCCC-----CCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc--------------------------CcccccCC
Confidence            65433     356899999999999999999996     8999999                          99999877


Q ss_pred             hhHH
Q psy3574         228 SKRV  231 (302)
Q Consensus       228 ~~~~  231 (302)
                      |..+
T Consensus       265 ~~~l  268 (316)
T d1fota_         265 WEKL  268 (316)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7543

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-45  Score=313.25  Aligned_cols=185  Identities=24%  Similarity=0.367  Sum_probs=148.3

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhcc-ccccccccchhHHHhhHHHHHHHHHhCC-----CCCCCCcC-
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGI-TAIELAELQPPMFDLHPMRALFLMSKSG-----FKPPALKD-   67 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~-----i~Hrdlkp-   67 (302)
                      |||+|+.+.      +|||||||+||+|. +++.... .+..+++..++.++.||+.||+|||++|     |+|||||| 
T Consensus        65 Iv~~~~~~~~~~~~~~~ivmEy~~~g~L~-~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~  143 (269)
T d2java1          65 IVRYYDRIIDRTNTTLYIVMEYCEGGDLA-SVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA  143 (269)
T ss_dssp             BCCEEEEEEC----CEEEEEECCTTEEHH-HHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGG
T ss_pred             EeeEEEEEEeCCCCEEEEEEecCCCCcHH-HHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchh
Confidence            688888764      48999999999999 6665421 1236999999999999999999999976     99999999 


Q ss_pred             ---CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH
Q psy3574          68 ---KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM  144 (302)
Q Consensus        68 ---~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  144 (302)
                         ++.+|.+||+|||+|+............+||+.|||||++.   +..|+.++|||||||++|+|++|+.||.+.+..
T Consensus       144 NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~  220 (269)
T d2java1         144 NVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMN---RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK  220 (269)
T ss_dssp             GEEECTTSCEEECCHHHHHHC-----------CCCSCCCHHHHT---TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             hcCcCCCCcEEEeeccceeecccCCCccccCCCCcccCCHHHHc---CCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHH
Confidence               88899999999999998776545556678999999999995   667999999999999999999999999998888


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         145 RALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       145 ~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +....+.......    .+..+++++.+||.+||+.||.+|||+.++++
T Consensus       221 ~~~~~i~~~~~~~----~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         221 ELAGKIREGKFRR----IPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHHHHHHTCCCC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHcCCCCC----CCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            8877777654332    24678999999999999999999999999999

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.2e-45  Score=323.38  Aligned_cols=195  Identities=18%  Similarity=0.218  Sum_probs=162.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|||||||+||+|. .++....   .+++..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus        69 Iv~l~~~~~~~~~~~ivmE~~~gg~L~-~~l~~~~---~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g  144 (364)
T d1omwa3          69 IVCMSYAFHTPDKLSFILDLMNGGDLH-YHLSQHG---VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG  144 (364)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHH-HHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSS
T ss_pred             EEEEEEEEEECCEEEEEEEecCCCcHH-HHHHhcc---cccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCC
Confidence            578888776    59999999999999 7887776   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+|+.....  .....+||+.|||||++.  .+..|+.++|||||||++|+|++|+.||.+............
T Consensus       145 ~iKl~DFGla~~~~~~--~~~~~~GT~~y~APE~~~--~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~  220 (364)
T d1omwa3         145 HVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQ--KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM  220 (364)
T ss_dssp             CEEECCCTTCEECSSS--CCCSCCSCGGGCCHHHHS--TTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHH
T ss_pred             cEEEeeeceeeecCCC--cccccccccccchhHHhh--cCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            9999999999877653  334568999999999985  345689999999999999999999999987554333222222


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCC-----HHHHHHHHHHHhHHHHHHhhhCCCCCCccccCCCccccch
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPT-----ADKLLQVILIHRARVAAVERKGGYNQQCDIWAHPFFKYDM  227 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t-----~~~ll~~l~~~~~~~~~~~~~~~~~~~~~i~~hp~f~~~~  227 (302)
                      ..  ......+..+++++++||.+||..||.+|||     ++++++                          ||||++..
T Consensus       221 ~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~--------------------------Hp~f~~i~  272 (364)
T d1omwa3         221 TL--TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE--------------------------SPFFRSLD  272 (364)
T ss_dssp             SS--SCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT--------------------------SGGGTTCC
T ss_pred             cc--cCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc--------------------------CccccCCC
Confidence            11  1122234678999999999999999999999     799999                          99999877


Q ss_pred             hhHH
Q psy3574         228 SKRV  231 (302)
Q Consensus       228 ~~~~  231 (302)
                      |...
T Consensus       273 ~~~~  276 (364)
T d1omwa3         273 WQMV  276 (364)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7544

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-45  Score=319.82  Aligned_cols=183  Identities=23%  Similarity=0.393  Sum_probs=148.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC-CCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS-GFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~i~Hrdlkp----~~~~   71 (302)
                      ||++|+.|.    +|||||||+||+|. +++.+.+   .+++..++.++.||+.||.|||++ ||+||||||    ++.+
T Consensus        66 Iv~l~~~~~~~~~~~iVmEy~~gg~L~-~~l~~~~---~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~  141 (322)
T d1s9ja_          66 IVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAG---RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR  141 (322)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTEEHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTT
T ss_pred             CCcEEEEEEECCEEEEEEEcCCCCcHH-HHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCC
Confidence            688888777    59999999999999 8887776   799999999999999999999974 999999999    8889


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      |++||+|||+|+.....  ...+.+||+.|||||++.   +..|+.++||||+||++|||++|+.||.+.+.........
T Consensus       142 ~~vkl~DFGla~~~~~~--~~~~~~GT~~Y~APEvl~---~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~  216 (322)
T d1s9ja_         142 GEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQ---GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG  216 (322)
T ss_dssp             CCEEECCCCCCHHHHHH--TC---CCSSCCCCHHHHH---CSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-
T ss_pred             CCEEEeeCCCccccCCC--ccccccCCccccCchHHc---CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            99999999999876543  344678999999999996   6779999999999999999999999997654332111100


Q ss_pred             h----------------------------------------cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHH
Q psy3574         152 K----------------------------------------SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKL  191 (302)
Q Consensus       152 ~----------------------------------------~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~l  191 (302)
                      .                                        ....++. .....+|.++++||.+||+.||++|||++|+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~  295 (322)
T d1s9ja_         217 CQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPK-LPSGVFSLEFQDFVNKCLIKNPAERADLKQL  295 (322)
T ss_dssp             -----------------------------CCCCHHHHHHHHHTSCCCC-CCBTTBCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             HHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCcc-CccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            0                                        0001111 1123468999999999999999999999999


Q ss_pred             HH
Q psy3574         192 LQ  193 (302)
Q Consensus       192 l~  193 (302)
                      |+
T Consensus       296 L~  297 (322)
T d1s9ja_         296 MV  297 (322)
T ss_dssp             HT
T ss_pred             hh
Confidence            99

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=6.4e-45  Score=320.46  Aligned_cols=184  Identities=21%  Similarity=0.252  Sum_probs=159.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHH-hccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C--C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWA-VGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K--D   69 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~-~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~--~   69 (302)
                      ||++|+.|.    +|||||||+||+|. +++. ..+   .+++..++.++.||+.||.|||++||+||||||    +  +
T Consensus        85 Iv~~~~~~~~~~~~~ivmE~~~gg~L~-~~l~~~~~---~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~  160 (350)
T d1koaa2          85 LVNLHDAFEDDNEMVMIYEFMSGGELF-EKVADEHN---KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK  160 (350)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCSCBHH-HHHTCTTS---CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST
T ss_pred             CCcEEEEEEECCEEEEEEEcCCCCCHH-HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccC
Confidence            678888776    59999999999999 6664 444   799999999999999999999999999999999    3  4


Q ss_pred             CCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          70 RCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        70 ~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      .++.+||+|||+|+.+... ....+.+||+.|||||++.   +..|+.++|||||||++|+|++|+.||.+.+..+.+..
T Consensus       161 ~~~~vkL~DFG~a~~~~~~-~~~~~~~gT~~Y~aPEv~~---~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~  236 (350)
T d1koaa2         161 RSNELKLIDFGLTAHLDPK-QSVKVTTGTAEFAAPEVAE---GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRN  236 (350)
T ss_dssp             TSCCEEECCCTTCEECCTT-SCEEEECSCTTTCCHHHHH---TCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCeEEEeecchheecccc-cccceecCcccccCHHHHc---CCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            5689999999999877654 3344568999999999995   67789999999999999999999999999998888888


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+. .....++.++++||.+||+.||++|||+.++|+
T Consensus       237 i~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         237 VKSCDWNMDD-SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             HHHTCCCSCC-GGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCc-ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            8876654443 223568999999999999999999999999999

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=8.3e-45  Score=319.96  Aligned_cols=185  Identities=20%  Similarity=0.266  Sum_probs=160.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC--C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD--R   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~--~   70 (302)
                      ||++|+.|.    +|||||||+||+|. +.+...+  .+|++.+++.++.||+.||+|||++||+||||||    ++  .
T Consensus        88 Iv~~~~~~~~~~~~~ivmE~~~gg~L~-~~~~~~~--~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~  164 (352)
T d1koba_          88 LINLHDAFEDKYEMVLILEFLSGGELF-DRIAAED--YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKK  164 (352)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCCCBHH-HHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTT
T ss_pred             CCcEEEEEEECCEEEEEEEcCCCChHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccC
Confidence            688888877    48999999999998 5544332  2699999999999999999999999999999999    33  6


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      .|.+||+|||+|+.+... ......+||+.|||||++.   +..|+.++|||||||++|+|++|..||.+.+....+..+
T Consensus       165 ~~~vkL~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i  240 (352)
T d1koba_         165 ASSVKIIDFGLATKLNPD-EIVKVTTATAEFAAPEIVD---REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV  240 (352)
T ss_dssp             CCCEEECCCTTCEECCTT-SCEEEECSSGGGCCHHHHT---TCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH
T ss_pred             CCeEEEeecccceecCCC-CceeeccCcccccCHHHHc---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            789999999999887654 3344568999999999996   677999999999999999999999999999999888888


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .......+. .....+++++.+||.+||+.||.+|||+.++|+
T Consensus       241 ~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         241 KRCDWEFDE-DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             HHCCCCCCS-STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HhCCCCCCc-ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            877654443 234678999999999999999999999999999

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-44  Score=311.72  Aligned_cols=184  Identities=22%  Similarity=0.296  Sum_probs=159.4

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|||||||+||+|. +++...+   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        75 Iv~~~~~~~~~~~~~iv~E~~~gg~L~-~~i~~~~---~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~  150 (293)
T d1jksa_          75 VITLHEVYENKTDVILILELVAGGELF-DFLAEKE---SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN  150 (293)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSS
T ss_pred             CCcEEEEEEECCEEEEEEEcCCCcccc-chhcccc---ccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCC
Confidence            688888877    58999999999999 7887776   799999999999999999999999999999999    44443


Q ss_pred             ----CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q psy3574          73 ----DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALF  148 (302)
Q Consensus        73 ----~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  148 (302)
                          .+||+|||+|+..... ....+..||+.|+|||++.   +..|+.++||||+||++|+|++|+.||.+.+..+...
T Consensus       151 ~~~~~vkl~DfG~a~~~~~~-~~~~~~~~t~~y~APE~~~---~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~  226 (293)
T d1jksa_         151 VPKPRIKIIDFGLAHKIDFG-NEFKNIFGTPEFVAPEIVN---YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA  226 (293)
T ss_dssp             SSSCCEEECCCTTCEECTTS-CBCSCCCCCGGGCCHHHHT---TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             CcccceEecchhhhhhcCCC-ccccccCCCCcccCHHHHc---CCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHH
Confidence                6999999999877654 3345568999999999995   6678999999999999999999999999999888888


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+.......+. ..+..++..+++||++||..||.+|||++++++
T Consensus       227 ~i~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         227 NVSAVNYEFED-EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             HHHTTCCCCCH-HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHhcCCCCCc-hhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            88776544332 223567999999999999999999999999999

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-44  Score=309.46  Aligned_cols=187  Identities=19%  Similarity=0.168  Sum_probs=158.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    .|||||||.|+++. .+...+.   .+++.+++.+++||+.||+|||++||+||||||    ++.++
T Consensus        62 Iv~~~~~~~~~~~~~ivmE~~~~~~~~-~~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~  137 (299)
T d1ua2a_          62 IIGLLDAFGHKSNISLVFDFMETDLEV-IIKDNSL---VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG  137 (299)
T ss_dssp             BCCEEEEECCTTCCEEEEECCSEEHHH-HHTTCCS---SCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             EeEEEeeeccCCceeehhhhhcchHHh-hhhhccc---CCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCC
Confidence            678888877    59999999998877 6666555   799999999999999999999999999999999    88999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||+|+............+||+.|+|||++.  ....|+.++||||+||++|+|++|.+||.+....+.+..+..
T Consensus       138 ~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~  215 (299)
T d1ua2a_         138 VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLF--GARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFE  215 (299)
T ss_dssp             CEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHT--TCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             ccccccCccccccCCCcccccceecChhhccHHHHc--cCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHH
Confidence            999999999988766555556678999999999986  345689999999999999999999999999988888877765


Q ss_pred             cCCCCCCCC-----------------------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALK-----------------------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~-----------------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+....                       ....+++++.+||.+||+.||++|||++|+|+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         216 TLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             HHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             hcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence            322111100                       01346889999999999999999999999999

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=3.8e-44  Score=305.91  Aligned_cols=187  Identities=22%  Similarity=0.358  Sum_probs=162.8

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    .|||||||+||+|. ++++.++   ++++.+++.++.||+.||+|||++||+||||||    ++.++
T Consensus        72 Iv~~~~~~~~~~~~~ivmE~~~~g~L~-~~l~~~~---~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~  147 (277)
T d1phka_          72 IIQLKDTYETNTFFFLVFDLMKKGELF-DYLTEKV---TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM  147 (277)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHH-HHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             eEEEEeecccCcceEEEEEcCCCchHH-HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCC
Confidence            578888877    49999999999999 8887777   899999999999999999999999999999999    88999


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhccccc---ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVE---RKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFL  149 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  149 (302)
                      .+||+|||+++.+... ......+||+.|+|||.+.+.   ....++.++||||+||++|+|++|+.||.+.+.......
T Consensus       148 ~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~  226 (277)
T d1phka_         148 NIKLTDFGFSCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRM  226 (277)
T ss_dssp             CEEECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CeEEccchheeEccCC-CceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHH
Confidence            9999999999887654 334556899999999998642   134578899999999999999999999999998888888


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +.......+. ....++|+++++||.+||+.||++|||++++++
T Consensus       227 i~~~~~~~~~-~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         227 IMSGNYQFGS-PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             HHHTCCCCCT-TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHhCCCCCCC-cccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            8776654332 233578999999999999999999999999999

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-43  Score=311.23  Aligned_cols=186  Identities=19%  Similarity=0.281  Sum_probs=148.0

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~   68 (302)
                      ||++|+.|.        +|||||||+||+|. +++...+ ...|++.+++.++.||+.||+|||++||+||||||    +
T Consensus        67 Iv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~-~~i~~~~-~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll  144 (335)
T d2ozaa1          67 IVRIVDVYENLYAGRKCLLIVMECLDGGELF-SRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY  144 (335)
T ss_dssp             BCCEEEEEEEEETTEEEEEEEEECCCSEEHH-HHHHSCS-CCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred             CCeEEEEEeecccCCCEEEEEEECCCCCcHH-HHHHhcC-CCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccc
Confidence            578887664        59999999999999 7776543 23699999999999999999999999999999999    3


Q ss_pred             ---CCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          69 ---DRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        69 ---~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                         ...+.+||+|||+|+..... ......+||+.|||||++.   +..|+.++|||||||++|+|++|++||.+.+...
T Consensus       145 ~~~~~~~~~Kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~  220 (335)
T d2ozaa1         145 TSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLG---PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA  220 (335)
T ss_dssp             SCSSTTCCEEECCCTTCEECCCC-CCCCCCSCCCSSCCCCCCC---GGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-
T ss_pred             ccccccccccccccceeeeccCC-CccccccCCcccCCcHHHc---CCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHH
Confidence               34678999999999877654 3445678999999999996   6669999999999999999999999997765444


Q ss_pred             HHHHHHh----cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSK----SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~----~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+..    .....+. .....+++++.+||.+||+.||++|||+.++++
T Consensus       221 ~~~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         221 ISPGMKTRIRMGQYEFPN-PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             -------CCCSCSSSCCT-THHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCC-cccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            3332222    1111111 112357999999999999999999999999999

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-43  Score=297.82  Aligned_cols=194  Identities=19%  Similarity=0.256  Sum_probs=156.5

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++|+...   +|||||||+||+|. +++....  ..+++..+..++.||+.||+|||++||+||||||    ++.++.
T Consensus        66 Iv~~~~~~~~~~~~lv~Ey~~~g~L~-~~l~~~~--~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~  142 (276)
T d1uwha_          66 ILLFMGYSTAPQLAIVTQWCEGSSLY-HHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT  142 (276)
T ss_dssp             BCCEEEEECSSSCEEEEECCCEEEHH-HHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSS
T ss_pred             EeeeeEEEeccEEEEEEecCCCCCHH-HHHhhcc--CCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCC
Confidence            577777544   58999999999999 7665432  1699999999999999999999999999999999    888999


Q ss_pred             EEEecccccccccccc--ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATI--NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||+|+......  .......||+.|||||++.+.....|+.++|||||||++|||+||+.||.+.+.......+.
T Consensus       143 ~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~  222 (276)
T d1uwha_         143 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV  222 (276)
T ss_dssp             EEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHH
T ss_pred             EEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHH
Confidence            9999999998765422  22345679999999999964444568999999999999999999999999887776666655


Q ss_pred             hcCCCCCC-CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q psy3574         152 KSGFKPPA-LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVILI  197 (302)
Q Consensus       152 ~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~~  197 (302)
                      ..+...+. ...+..+++++.+||.+||..||.+|||+.++++++..
T Consensus       223 ~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~  269 (276)
T d1uwha_         223 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL  269 (276)
T ss_dssp             HHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            55544443 33456789999999999999999999999999996653

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-42  Score=297.66  Aligned_cols=186  Identities=22%  Similarity=0.201  Sum_probs=154.3

Q ss_pred             Cchhhhcch---------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----
Q psy3574           1 MSRVFNHFL---------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----   67 (302)
Q Consensus         1 iv~~~~~~~---------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----   67 (302)
                      ||++|+.|.         .|++|||+.+|.+. .......  ..+++..++.++.||+.||+|||++||+||||||    
T Consensus        72 Iv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NIL  148 (305)
T d1blxa_          72 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT-YLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNIL  148 (305)
T ss_dssp             BCCEEEEEEEEECSSEEEEEEEEECCSCBHHH-HHHHSCT--TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred             cceeeeeecccccccCceEEEEEEeccCCchh-hhhhccC--CCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEE
Confidence            578887763         58999999998776 4443332  3699999999999999999999999999999999    


Q ss_pred             CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy3574          68 KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRAL  147 (302)
Q Consensus        68 ~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  147 (302)
                      ++..+.+||+|||+++..... ......+||+.|+|||++.   +..|+.++||||+||++|+|++|++||.+.+..+.+
T Consensus       149 i~~~~~~kl~dfg~~~~~~~~-~~~~~~~gT~~Y~APE~~~---~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~  224 (305)
T d1blxa_         149 VTSSGQIKLADFGLARIYSFQ-MALTSVVVTLWYRAPEVLL---QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL  224 (305)
T ss_dssp             ECTTCCEEECSCCSCCCCCGG-GGGCCCCCCCTTCCHHHHT---TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             EcCCCCeeecchhhhhhhccc-ccCCCcccChhhcCcchhc---CCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHH
Confidence            788899999999998866544 3445678999999999996   677999999999999999999999999999888877


Q ss_pred             HHHHhcCCCC----------------------CCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         148 FLMSKSGFKP----------------------PALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~~----------------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+......+                      +.......+++.+.+||.+||+.||++|||+.|+|+
T Consensus       225 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         225 GKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             HHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            7765421111                      111123467899999999999999999999999999

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-43  Score=306.44  Aligned_cols=185  Identities=19%  Similarity=0.243  Sum_probs=158.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC--C
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD--R   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~--~   70 (302)
                      ||++|+.|.    +|||||||+||+|. +++...+  ..+++.+++.++.||+.||+|||++||+||||||    ++  .
T Consensus        63 Iv~~~~~~~~~~~~~lvmE~~~gg~L~-~~i~~~~--~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~  139 (321)
T d1tkia_          63 ILHLHESFESMEELVMIFEFISGLDIF-ERINTSA--FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRR  139 (321)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCCCBHH-HHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS
T ss_pred             CCeEEEEEEECCEEEEEEecCCCCcHH-HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCC
Confidence            688888777    59999999999999 7775543  2699999999999999999999999999999999    33  4


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      .+.+||+|||+++..... ......+|++.|+|||.+.   +..|+.++|||||||++|+|++|..||.+.+.......+
T Consensus       140 ~~~ikl~DFG~~~~~~~~-~~~~~~~~t~~y~ape~~~---~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i  215 (321)
T d1tkia_         140 SSTIKIIEFGQARQLKPG-DNFRLLFTAPEYYAPEVHQ---HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI  215 (321)
T ss_dssp             CCCEEECCCTTCEECCTT-CEEEEEESCGGGSCHHHHT---TCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred             ceEEEEcccchhhccccC-Ccccccccccccccchhcc---CCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            568999999999876543 3344567999999999985   667899999999999999999999999999999888888


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .......+. ..+..+++++++||.+||..||.+|||+.++++
T Consensus       216 ~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         216 MNAEYTFDE-EAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHTCCCCCH-HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HhCCCCCCh-hhccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            887655432 123467999999999999999999999999999

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-42  Score=300.62  Aligned_cols=188  Identities=17%  Similarity=0.175  Sum_probs=157.5

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc--------------------cccccccchhHHHhhHHHHHHHHH
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT--------------------AIELAELQPPMFDLHPMRALFLMS   56 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~--------------------~~~l~~~~~~~i~~qi~~aL~~lH   56 (302)
                      ||++|+.+.    .|+|||||+||+|. ++++....                    ...+++..+..++.||+.||+|||
T Consensus       103 Iv~l~~~~~~~~~~~lv~Ey~~~g~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH  181 (325)
T d1rjba_         103 IVNLLGACTLSGPIYLIFEYCCYGDLL-NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE  181 (325)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHH-HHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH
T ss_pred             EeEEEEEEeeCCeEEEEEEcCCCCcHH-HHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            688898777    58999999999999 77765421                    124888999999999999999999


Q ss_pred             hCCCCCCCCcC----CCCCCCEEEecccccccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHH
Q psy3574          57 KSGFKPPALKD----KDRCGDVKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIE  130 (302)
Q Consensus        57 ~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~e  130 (302)
                      ++||+||||||    ++.++.+||+|||+|+........  ..+..||+.|||||++.   ...|+.++|||||||++||
T Consensus       182 ~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~~DiwS~Gvil~e  258 (325)
T d1rjba_         182 FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF---EGIYTIKSDVWSYGILLWE  258 (325)
T ss_dssp             HTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH---HCCCCHHHHHHHHHHHHHH
T ss_pred             hCCeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHc---CCCCCcceeccchhHHHHH
Confidence            99999999999    888999999999999876554322  23456899999999995   6779999999999999999


Q ss_pred             HHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         131 LAE-LQPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       131 ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      |++ |.+||.+.+....+..+......++   .+..+++++.+||.+||+.||++|||+++|+++|
T Consensus       259 mlt~g~~Pf~~~~~~~~~~~~~~~~~~~~---~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L  321 (325)
T d1rjba_         259 IFSLGVNPYPGIPVDANFYKLIQNGFKMD---QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL  321 (325)
T ss_dssp             HTTTSCCSSTTCCCSHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHhcCCCCC---CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            997 8999988777666666666654433   3467899999999999999999999999999865

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-41  Score=294.24  Aligned_cols=188  Identities=16%  Similarity=0.182  Sum_probs=154.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    +|+||||+.++.+. .+.....  ..+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        63 Iv~~~~~~~~~~~~~iv~e~~~~~~~~-~~~~~~~--~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~  139 (298)
T d1gz8a_          63 IVKLLDVIHTENKLYLVFEFLHQDLKK-FMDASAL--TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG  139 (298)
T ss_dssp             BCCEEEEEEETTEEEEEEECCSEEHHH-HHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             EEEeccccccccceeEEEeecCCchhh-hhhhhcc--cCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccC
Confidence            688888887    59999999875554 4433322  3699999999999999999999999999999999    88889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||.|+............+||+.|+|||++.  ....++.++|+||+||++|+|++|+.||.+.+.......+..
T Consensus       140 ~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~--~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~  217 (298)
T d1gz8a_         140 AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL--GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR  217 (298)
T ss_dssp             CEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHT--TCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             cceeccCCcceeccCCcccceeecccceeeehhhhc--cccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHH
Confidence            999999999988766555566678999999999986  234468999999999999999999999999888877776654


Q ss_pred             cCCCCCCCC------------------------CCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALK------------------------DKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~------------------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+....                        ....++.++.+||++||+.||++|||++|+++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~  282 (298)
T d1gz8a_         218 TLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  282 (298)
T ss_dssp             HHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            322111110                        01256789999999999999999999999999

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-42  Score=291.42  Aligned_cols=174  Identities=22%  Similarity=0.290  Sum_probs=144.9

Q ss_pred             Cchhhhcch----heeEEEecCC-cchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC-C
Q psy3574           1 MSRVFNHFL----QVAAVERKGG-YNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD-R   70 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~-g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~-~   70 (302)
                      ||++|+.|.    .|+||||+.+ +++. +++..+.   .+++.+++.++.||+.||+|||++||+||||||    ++ +
T Consensus        71 Iv~~~~~~~~~~~~~lv~e~~~~~~~l~-~~~~~~~---~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~  146 (273)
T d1xwsa_          71 VIRLLDWFERPDSFVLILERPEPVQDLF-DFITERG---ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN  146 (273)
T ss_dssp             BCCEEEEEECSSEEEEEEECCSSEEEHH-HHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETT
T ss_pred             ccEEEEEEeeCCeEEEEEEeccCcchHH-HHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecC
Confidence            678888776    4999999986 5676 7777766   799999999999999999999999999999999    54 5


Q ss_pred             CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy3574          71 CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLM  150 (302)
Q Consensus        71 ~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  150 (302)
                      .+.+||+|||+|+.....  ...+.+||+.|+|||++.+  ...++.++||||+||++|+|++|+.||.+.+      .+
T Consensus       147 ~~~vkl~DFG~a~~~~~~--~~~~~~GT~~y~aPE~~~~--~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~i  216 (273)
T d1xwsa_         147 RGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRY--HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EI  216 (273)
T ss_dssp             TTEEEECCCTTCEECCSS--CBCCCCSCGGGSCHHHHHH--SCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HH
T ss_pred             CCeEEECccccceecccc--cccccccCCCcCCHHHHcC--CCCCCcccccccceeeehhHhhCCCCCCCch------HH
Confidence            589999999999765542  3456789999999999862  2334678999999999999999999997532      23


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ......     .+..+|+++++||.+||..||++|||++|+++
T Consensus       217 ~~~~~~-----~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         217 IRGQVF-----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             HHCCCC-----CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhcccC-----CCCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            333322     23568999999999999999999999999999

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-42  Score=291.41  Aligned_cols=183  Identities=14%  Similarity=0.121  Sum_probs=154.5

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++|+.+.   .|||||||++|+|. +++....   .+++.++..++.||+.||+|||++||+||||||    ++.++.
T Consensus        70 Iv~~~g~~~~~~~~lvmE~~~~g~L~-~~l~~~~---~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~  145 (277)
T d1xbba_          70 IVRMIGICEAESWMLVMEMAELGPLN-KYLQQNR---HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY  145 (277)
T ss_dssp             BCCEEEEEESSSEEEEEECCTTEEHH-HHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE
T ss_pred             CceEEEEeccCCEEEEEEcCCCCcHH-HHHhhcc---CCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCc
Confidence            678888765   48999999999999 7887766   799999999999999999999999999999999    888999


Q ss_pred             EEEecccccccccccccc---ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          74 VKLADFGVSAQITATINK---RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      +||+|||+|+.+......   .....||+.|||||++.   ...|+.++|||||||++|||++ |++||.+.+..+....
T Consensus       146 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~---~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~  222 (277)
T d1xbba_         146 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN---YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM  222 (277)
T ss_dssp             EEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHH---HCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH
T ss_pred             ccccchhhhhhccccccccccccccCCCceecCchhhc---CCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHH
Confidence            999999999876543221   23356899999999996   5668999999999999999998 8999999888877766


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQV  194 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~  194 (302)
                      +..... +   ..+..++.++.+||.+||+.||++|||+.++++.
T Consensus       223 i~~~~~-~---~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~  263 (277)
T d1xbba_         223 LEKGER-M---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR  263 (277)
T ss_dssp             HHTTCC-C---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHcCCC-C---CCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            665432 2   2246789999999999999999999999998653

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.7e-41  Score=288.98  Aligned_cols=186  Identities=13%  Similarity=0.148  Sum_probs=147.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++||.+.    .|+|||||+||+|. +++....  ..+++.++..++.||+.||+|||++||+||||||    ++.++
T Consensus        89 Iv~l~g~~~~~~~~~iv~Ey~~~g~L~-~~~~~~~--~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~  165 (299)
T d1jpaa_          89 VIHLEGVVTKSTPVMIITEFMENGSLD-SFLRQND--GQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNL  165 (299)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTEEHH-HHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred             CccEEEEEeeCCEEEEEEEecCCCcce-eeecccc--CCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCC
Confidence            688999876    59999999999999 6666533  2699999999999999999999999999999999    88999


Q ss_pred             CEEEecccccccccccccc-----ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHH
Q psy3574          73 DVKLADFGVSAQITATINK-----RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRA  146 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~  146 (302)
                      .+||+|||+|+.+......     .....||+.|||||++.   ...|+.++|||||||++|||+| |..||.+....+.
T Consensus       166 ~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~  242 (299)
T d1jpaa_         166 VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ---YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV  242 (299)
T ss_dssp             CEEECCC-----------------------CGGGSCHHHHH---SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred             cEEECCcccceEccCCCCcceeeecccccCCccccCHHHHh---cCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHH
Confidence            9999999999876543221     12245789999999985   6779999999999999999998 8999999888887


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         147 LFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       147 ~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ...+......+    .+..++..+.+||.+||+.||.+|||+.++++.|-
T Consensus       243 ~~~i~~~~~~~----~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~  288 (299)
T d1jpaa_         243 INAIEQDYRLP----PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD  288 (299)
T ss_dssp             HHHHHTTCCCC----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             HHHHHcCCCCC----CCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            77776643322    24568999999999999999999999999998653

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=7e-41  Score=287.45  Aligned_cols=187  Identities=19%  Similarity=0.230  Sum_probs=151.1

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.|.    .|++|||+.++.+. .+....+   .+++..++.++.||+.||+|||++||+||||||    ++.++
T Consensus        62 Iv~~~~~~~~~~~~~i~~e~~~~~~~~-~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~  137 (286)
T d1ob3a_          62 IVKLYDVIHTKKRLVLVFEHLDQDLKK-LLDVCEG---GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG  137 (286)
T ss_dssp             BCCEEEEEECSSCEEEEEECCSEEHHH-HHHTSTT---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             EEeeeeecccCCceeEEEEeehhhhHH-HHHhhcC---CcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCC
Confidence            578888777    48999999987776 6666566   899999999999999999999999999999999    78899


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  152 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  152 (302)
                      .+||+|||.|..............|++.|+|||.+.  ....++.++|+||+||++|+|++|+.||.+.+..+.+..+..
T Consensus       138 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~--~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~  215 (286)
T d1ob3a_         138 ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLM--GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR  215 (286)
T ss_dssp             CEEECCTTHHHHHCC---------CCCTTCCHHHHT--TCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CEEecccccceecccCccccceecccchhhhHHHHh--CCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            999999999988765544455667999999999986  345578999999999999999999999998888777766554


Q ss_pred             cCCCCC------------------------CCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPP------------------------ALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~------------------------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ....+.                        .......+++.+.+||++||+.||++|||++|+++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         216 ILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             HHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            211110                        01123457899999999999999999999999999

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-41  Score=287.83  Aligned_cols=184  Identities=15%  Similarity=0.157  Sum_probs=154.9

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHh-ccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAV-GITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.+.   .|+|||||+||+|. +++.. +.   .+++.++..++.||+.||+|||++||+||||||    ++.++
T Consensus        71 Iv~l~g~~~~~~~~lvmE~~~~g~L~-~~l~~~~~---~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~  146 (285)
T d1u59a_          71 IVRLIGVCQAEALMLVMEMAGGGPLH-KFLVGKRE---EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH  146 (285)
T ss_dssp             BCCEEEEEESSSEEEEEECCTTEEHH-HHHTTCTT---TSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETT
T ss_pred             EeeEeeeeccCeEEEEEEeCCCCcHH-HHhhcccc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCC
Confidence            678888665   48999999999999 66543 34   799999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccc---cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q psy3574          73 DVKLADFGVSAQITATIN---KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALF  148 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~  148 (302)
                      .+||+|||+|+.+.....   ......||+.|||||++.   ...|+.++|||||||++|||+| |+.||.+.+..+...
T Consensus       147 ~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~  223 (285)
T d1u59a_         147 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN---FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA  223 (285)
T ss_dssp             EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHH---HCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHH
T ss_pred             ceeeccchhhhcccccccccccccccccCccccChHHHh---CCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            999999999987654321   223456899999999995   5678999999999999999998 999999888877777


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         149 LMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       149 ~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .+......    ..+..+++++.+||.+||..||++|||+.++++.+
T Consensus       224 ~i~~~~~~----~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L  266 (285)
T d1u59a_         224 FIEQGKRM----ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM  266 (285)
T ss_dssp             HHHTTCCC----CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             HHHcCCCC----CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence            66654322    22467899999999999999999999999997643

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.6e-40  Score=284.87  Aligned_cols=187  Identities=17%  Similarity=0.201  Sum_probs=152.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.+.    .|||||||++|+|. .++.... ...+++..+..++.||+.||+|||++||+||||||    ++.++
T Consensus        75 Iv~~~~~~~~~~~~~iv~E~~~~g~l~-~~l~~~~-~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~  152 (287)
T d1opja_          75 LVQLLGVCTREPPFYIITEFMTYGNLL-DYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH  152 (287)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHH-HHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             EecCCccEeeCCeeEEEeecccCcchH-HHhhhcc-ccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCC
Confidence            688999877    58999999999999 6665432 23789999999999999999999999999999999    88899


Q ss_pred             CEEEecccccccccccccc-ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINK-RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      .+||+|||+|+........ .....|++.|+|||++.   ...|+.++||||+||++|||++|..||...........+.
T Consensus       153 ~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i  229 (287)
T d1opja_         153 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL  229 (287)
T ss_dssp             CEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHH---HCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred             cEEEccccceeecCCCCceeeccccccccccChHHHc---CCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHH
Confidence            9999999999876553222 23345789999999995   6679999999999999999999777665544444444444


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ..+..++   .+..+++++.+||.+||+.||++|||+.++++.+
T Consensus       230 ~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L  270 (287)
T d1opja_         230 EKDYRME---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF  270 (287)
T ss_dssp             HTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             hcCCCCC---CCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence            4443332   3467899999999999999999999999998743

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-40  Score=280.02  Aligned_cols=185  Identities=15%  Similarity=0.138  Sum_probs=144.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++||.+.    .|+|||||++|+|. +++....  ..+++..+..++.||+.||+|||+++|+||||||    ++.++
T Consensus        62 Iv~~~g~~~~~~~~~lv~E~~~~g~L~-~~l~~~~--~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~  138 (263)
T d1sm2a_          62 LVQLYGVCLEQAPICLVFEFMEHGCLS-DYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ  138 (263)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHH-HHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGG
T ss_pred             cccccceeccCCceEEEEEecCCCcHH-HHhhccc--cCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCC
Confidence            688898776    58999999999999 6665443  2688999999999999999999999999999999    88899


Q ss_pred             CEEEecccccccccccccc-ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINK-RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||+++........ .....||+.|+|||++.   +..|+.++|||||||++|||+| |.+||...+..+....+
T Consensus       139 ~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i  215 (263)
T d1sm2a_         139 VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS---FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI  215 (263)
T ss_dssp             CEEECSCC------------------CTTSCCHHHHT---TCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHH
T ss_pred             CeEecccchheeccCCCceeecceecCcccCChHHhc---CCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHH
Confidence            9999999999876543222 23457899999999996   6679999999999999999999 56667666776666666


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ......    ..+..+++++.+||.+||+.||++|||+++++++|
T Consensus       216 ~~~~~~----~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L  256 (263)
T d1sm2a_         216 STGFRL----YKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL  256 (263)
T ss_dssp             HHTCCC----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HhcCCC----CCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHH
Confidence            654322    22466799999999999999999999999999954

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-41  Score=285.50  Aligned_cols=186  Identities=17%  Similarity=0.256  Sum_probs=151.8

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++|+.+.   .|+|||||++|+|. +++.... +.++++..+..++.||+.||.|||++||+||||||    ++.++.
T Consensus        70 Iv~~~g~~~~~~~~iv~Ey~~~g~L~-~~~~~~~-~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~  147 (272)
T d1qpca_          70 LVRLYAVVTQEPIYIITEYMENGSLV-DFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS  147 (272)
T ss_dssp             BCCEEEEECSSSCEEEEECCTTCBHH-HHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC
T ss_pred             EeEEEeeeccCCeEEEEEeCCCCcHH-HHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccc
Confidence            688888655   58999999999999 6554332 23599999999999999999999999999999999    889999


Q ss_pred             EEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAEL-QPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||+|+....... ......||+.|||||++.   ...|+.++|||||||++|||+|| .+||......+....+.
T Consensus       148 ~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~  224 (272)
T d1qpca_         148 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE  224 (272)
T ss_dssp             EEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHH---HCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred             eeeccccceEEccCCccccccccCCcccccChHHHh---CCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            99999999987754322 233457899999999985   56689999999999999999995 55556666666665655


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ... .++   .+..++.++.+||.+||+.||++|||++++++.|
T Consensus       225 ~~~-~~~---~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L  264 (272)
T d1qpca_         225 RGY-RMV---RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL  264 (272)
T ss_dssp             TTC-CCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             hcC-CCC---CcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHh
Confidence            432 222   2467899999999999999999999999998855

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-40  Score=292.62  Aligned_cols=189  Identities=20%  Similarity=0.179  Sum_probs=149.5

Q ss_pred             Cchhhhcch----------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---
Q psy3574           1 MSRVFNHFL----------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---   67 (302)
Q Consensus         1 iv~~~~~~~----------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---   67 (302)
                      ||++++.|.          +|||||||++|.+. .+.........+++.+++.+++||+.||+|||++||+||||||   
T Consensus        75 iv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~-~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NI  153 (350)
T d1q5ka_          75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL  153 (350)
T ss_dssp             BCCEEEEEEEC--CCSCCEEEEEEECCSEEHHH-HHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGE
T ss_pred             CCcEEEEEEecCccCCceEEEEEEeccCCccHH-HHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceE
Confidence            567777663          58999999886544 4443222223799999999999999999999999999999999   


Q ss_pred             -CCCC-CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          68 -KDRC-GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        68 -~~~~-~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                       ++.+ ..+||+|||+++..... ....+.+|++.|+|||.+.  ....|+.++||||+||++|+|++|+.||...+..+
T Consensus       154 Ll~~~~~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~--~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~  230 (350)
T d1q5ka_         154 LLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELIF--GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD  230 (350)
T ss_dssp             EECTTTCCEEECCCTTCEECCTT-SCCCSCCSCTTSCCHHHHT--TCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH
T ss_pred             EEecCCCceeEecccchhhccCC-cccccccccccccChHHhh--cccCCCcceeecccceEEEehhhCCCCCCCCCHHH
Confidence             5555 58999999999877554 3345668999999999986  24568999999999999999999999999888877


Q ss_pred             HHHHHHhcCC-----------------CCCC-------CCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGF-----------------KPPA-------LKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~-----------------~~~~-------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+..+.....                 ..+.       ......+++++.+||.+||..||++|||+.|+|+
T Consensus       231 ~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         231 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             HHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            7766643110                 0010       0112457899999999999999999999999999

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-40  Score=277.15  Aligned_cols=185  Identities=16%  Similarity=0.134  Sum_probs=156.7

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++|+.+.    +|+||||+++|+|.+.+.....   .+++..+..++.|++.||+|||++||+||||||    ++.++
T Consensus        61 Iv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~---~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~  137 (258)
T d1k2pa_          61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG  137 (258)
T ss_dssp             BCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGG---CCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTC
T ss_pred             eeeEEEEEeeCCceEEEEEccCCCcHHHhhhcccc---CCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCC
Confidence            688998776    5999999999999933344444   789999999999999999999999999999999    88899


Q ss_pred             CEEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      .+||+|||+++....... ......||+.|+|||++.   ...|+.++|||||||++|||+| |+.||.+.+..+...++
T Consensus       138 ~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i  214 (258)
T d1k2pa_         138 VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM---YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI  214 (258)
T ss_dssp             CEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHH
T ss_pred             cEEECcchhheeccCCCceeecccCCCCCcCCcHHhc---CCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHH
Confidence            999999999986654322 223456899999999996   6679999999999999999998 89999999888887777


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ......    ..+..++.++.+||.+||+.||++|||+++++++|
T Consensus       215 ~~~~~~----~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L  255 (258)
T d1k2pa_         215 AQGLRL----YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI  255 (258)
T ss_dssp             HTTCCC----CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             HhCCCC----CCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHh
Confidence            664322    23467899999999999999999999999999954

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-40  Score=288.39  Aligned_cols=187  Identities=22%  Similarity=0.261  Sum_probs=148.6

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.+.    +|+||||+.||+|. +++...+   .+++..++.++.||+.||.|||++||+||||||    ++.+|
T Consensus        91 Iv~~~~~~~~~~~~~~v~e~~~~~~L~-~~i~~~~---~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~  166 (322)
T d1vzoa_          91 LVTLHYAFQTETKLHLILDYINGGELF-THLSQRE---RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG  166 (322)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCSCBHH-HHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             EEEeeeeeccCCceeeeeecccccHHH-HHHHhcc---cccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCC
Confidence            567777665    58999999999999 7777776   789999999999999999999999999999999    88889


Q ss_pred             CEEEecccccccccccc-ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATI-NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  151 (302)
                      .+||+|||+++...... ....+..|++.|+|||.+.+. ...++.++|||||||++|+|++|+.||.+.........+.
T Consensus       167 ~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~  245 (322)
T d1vzoa_         167 HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGG-DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS  245 (322)
T ss_dssp             CEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTC-C---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHH
T ss_pred             CEEEeeccchhhhcccccccccccccccccchhHHhhcC-CcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            99999999998765432 234566899999999999632 3347889999999999999999999997654333333322


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-----CHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-----TADKLLQ  193 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-----t~~~ll~  193 (302)
                      ..... .....+..+++++.+||.+||..||++||     |++|+++
T Consensus       246 ~~~~~-~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         246 RRILK-SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             HHHHH-CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             Hhccc-CCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            21111 11122456899999999999999999999     5899999

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-40  Score=284.60  Aligned_cols=189  Identities=17%  Similarity=0.177  Sum_probs=146.4

Q ss_pred             Cchhhhcch-----heeEEEecCCcchHHHHHHhccc-------------cccccccchhHHHhhHHHHHHHHHhCCCCC
Q psy3574           1 MSRVFNHFL-----QVAAVERKGGYNQQCDIWAVGIT-------------AIELAELQPPMFDLHPMRALFLMSKSGFKP   62 (302)
Q Consensus         1 iv~~~~~~~-----~~iv~E~~~~g~L~~~~~~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~H   62 (302)
                      ||++++.+.     +|+|||||++|+|. +++.....             ...+++.++..++.||+.||+|||++||+|
T Consensus        79 iv~~~~~~~~~~~~~~iv~E~~~~g~L~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivH  157 (299)
T d1ywna1          79 VVNLLGACTKPGGPLMVIVEFCKFGNLS-TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH  157 (299)
T ss_dssp             BCCEEEEECSTTSCCEEEEECCTTCBHH-HHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EEEeeeeeccCCCeEEEEEEecCCCcHH-HHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcC
Confidence            355555443     58999999999999 77765431             124889999999999999999999999999


Q ss_pred             CCCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhC-C
Q psy3574          63 PALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAEL-Q  135 (302)
Q Consensus        63 rdlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g-~  135 (302)
                      |||||    ++.++++||+|||+|+.......  ......||+.|||||++.   +..|+.++||||+||++|||++| .
T Consensus       158 rDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~---~~~~~~~sDiwS~Gvil~ellt~~~  234 (299)
T d1ywna1         158 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEIFSLGA  234 (299)
T ss_dssp             SCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             CcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhh---cCCCCcccceeehHHHHHHHHhCCC
Confidence            99999    88899999999999987654322  233567999999999996   67799999999999999999986 5


Q ss_pred             CCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         136 PPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       136 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      +||.+......+..+...+..++   .+..+++++.+||.+||+.||++|||+.+++++|-
T Consensus       235 ~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~  292 (299)
T d1ywna1         235 SPYPGVKIDEEFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG  292 (299)
T ss_dssp             CSSTTCCCSHHHHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHhcCCCCC---CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence            67877665555555544443332   34668999999999999999999999999999653

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-40  Score=281.28  Aligned_cols=186  Identities=15%  Similarity=0.153  Sum_probs=146.7

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++|+.+.   .|+|||||++|+|...+.....   .+++..++.++.||+.||.|||++||+||||||    ++.++.
T Consensus        70 Iv~l~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~---~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~  146 (273)
T d1mp8a_          70 IVKLIGVITENPVWIIMELCTLGELRSFLQVRKY---SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC  146 (273)
T ss_dssp             BCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTT---TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE
T ss_pred             EeeEEEEEecCeEEEEEEeccCCcHHhhhhccCC---CCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCc
Confidence            688888776   5899999999999933344444   799999999999999999999999999999999    888899


Q ss_pred             EEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  151 (302)
                      +||+|||+|+....... ......||+.|+|||++.   ...|+.++|||||||++|||++ |.+||.+.+..+....+.
T Consensus       147 ~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~---~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~  223 (273)
T d1mp8a_         147 VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN---FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE  223 (273)
T ss_dssp             EEECC-------------------CCGGGCCHHHHH---HCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH
T ss_pred             EEEccchhheeccCCcceeccceecCcccchhhHhc---cCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            99999999987654322 233456899999999995   6779999999999999999998 899999888888777776


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .....    ..+..+++.+.+||.+||..||.+|||+.+++++|-
T Consensus       224 ~~~~~----~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~  264 (273)
T d1mp8a_         224 NGERL----PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS  264 (273)
T ss_dssp             TTCCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cCCCC----CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            64322    235678999999999999999999999999998654

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.6e-40  Score=281.05  Aligned_cols=185  Identities=21%  Similarity=0.308  Sum_probs=150.7

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~   68 (302)
                      ||++++.+.        .|||||||+||+|. .++...+   ++++.+++.++.||+.||+|||++||+||||||    +
T Consensus        69 iv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~-~~~~~~~---~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll  144 (277)
T d1o6ya_          69 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLR-DIVHTEG---PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI  144 (277)
T ss_dssp             BCCEEEEEEEECSSSEEEEEEEECCCEEEHH-HHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred             CCcccceeeeccCCCceEEEEEECCCCCEeh-hhhcccC---CCCHHHHHHHHHHHHHHHHHHHhCCccCccccCccccc
Confidence            577777654        58999999999999 7777776   799999999999999999999999999999999    8


Q ss_pred             CCCCCEEEecccccccccccc---ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          69 DRCGDVKLADFGVSAQITATI---NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        69 ~~~~~ikL~DFg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                      +.++.++|+|||.+.......   ......+||+.|||||++.   +..|+.++||||+||++|+|++|++||.+.+..+
T Consensus       145 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~---~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~  221 (277)
T d1o6ya_         145 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR---GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS  221 (277)
T ss_dssp             ETTSCEEECCCTTCEECC----------------TTCCHHHHT---TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             CccccceeehhhhhhhhccccccccccccccCcccccCHHHHc---CCCCCcceecccchHHHHHHHhCCCCCCCcCHHH
Confidence            889999999999987654332   2334568999999999995   6679999999999999999999999999998888


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCC-CHHHHHH
Q psy3574         146 ALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRP-TADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~-t~~~ll~  193 (302)
                      ....+......++. .....+|+++.+||.+||..||.+|| |+++++.
T Consensus       222 ~~~~~~~~~~~~~~-~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~  269 (277)
T d1o6ya_         222 VAYQHVREDPIPPS-ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA  269 (277)
T ss_dssp             HHHHHHHCCCCCGG-GTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             HHHHHHhcCCCCCc-hhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHH
Confidence            88887776644432 33467899999999999999999999 6777765

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-39  Score=285.57  Aligned_cols=182  Identities=20%  Similarity=0.247  Sum_probs=149.8

Q ss_pred             Cchhhhcch----------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---
Q psy3574           1 MSRVFNHFL----------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---   67 (302)
Q Consensus         1 iv~~~~~~~----------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---   67 (302)
                      ||++|+.|.          +|+||||| |++|. .+.+..    .+++..++.+++||+.||+|||++||+||||||   
T Consensus        79 iv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~-~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NI  152 (346)
T d1cm8a_          79 VIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLG-KLMKHE----KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNL  152 (346)
T ss_dssp             BCCCSEEECSCSSTTTCCCCEEEEECC-SEEHH-HHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred             eeEEEEEeccCccccccceEEEEEecc-cccHH-HHHHhc----cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchh
Confidence            577887764          58999999 55777 666554    599999999999999999999999999999999   


Q ss_pred             -CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH
Q psy3574          68 -KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRA  146 (302)
Q Consensus        68 -~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  146 (302)
                       ++.++.+||+|||+|+.....   ....+||+.|+|||++.  ....++.++||||+||++|+|++|++||.+.+....
T Consensus       153 L~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~  227 (346)
T d1cm8a_         153 AVNEDCELKILDFGLARQADSE---MTGYVVTRWYRAPEVIL--NWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ  227 (346)
T ss_dssp             EECTTCCEEECCCTTCEECCSS---CCSSCSCGGGCCTHHHH--TTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             hcccccccccccccceeccCCc---cccccccccccCHHHHc--CCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHH
Confidence             889999999999999876543   34568999999999986  234578999999999999999999999998877766


Q ss_pred             HHHHHhcCCCCC--------------------------CCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         147 LFLMSKSGFKPP--------------------------ALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       147 ~~~i~~~~~~~~--------------------------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      +..+......++                          .......+++.+.+||.+||..||.+|||+.++|+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~  300 (346)
T d1cm8a_         228 LKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  300 (346)
T ss_dssp             HHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            655443221111                          11123457899999999999999999999999999

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-38  Score=273.29  Aligned_cols=185  Identities=14%  Similarity=0.182  Sum_probs=144.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHH-hccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWA-VGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~-~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++||.+.    .|+|||||.+|++. +++. ...   .+++.++..++.||+.||+|||+++|+||||||    ++.+
T Consensus        71 Iv~~~g~~~~~~~~~~v~e~~~~~~l~-~~~~~~~~---~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~  146 (283)
T d1mqba_          71 IIRLEGVISKYKPMMIITEYMENGALD-KFLREKDG---EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSN  146 (283)
T ss_dssp             BCCEEEEECSSSSEEEEEECCTTEEHH-HHHHHTTT---CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             EeeeeEEEecCCceEEEEEecccCcch-hhhhcccc---cccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCC
Confidence            688888776    48999999999999 5444 444   799999999999999999999999999999999    8899


Q ss_pred             CCEEEecccccccccccccc---ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCC-CCCCChHHHH
Q psy3574          72 GDVKLADFGVSAQITATINK---RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPP-MFDLHPMRAL  147 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p-f~~~~~~~~~  147 (302)
                      +.+||+|||+|+........   .....||+.|||||++.   ...|+.++|||||||++|||++|..| +......+..
T Consensus       147 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~  223 (283)
T d1mqba_         147 LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS---YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM  223 (283)
T ss_dssp             CCEEECCCCC-----------------CCCGGGSCHHHHH---SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred             CeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHc---cCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHH
Confidence            99999999999876543221   22346899999999985   67799999999999999999996555 5555555555


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         148 FLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       148 ~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      ..+... ..++   .+..++..+.+||.+||..||++|||+.++++.+.
T Consensus       224 ~~i~~~-~~~~---~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~  268 (283)
T d1mqba_         224 KAINDG-FRLP---TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILD  268 (283)
T ss_dssp             HHHHTT-CCCC---CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             HHHhcc-CCCC---CchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHH
Confidence            555443 2322   24568999999999999999999999999998654

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-39  Score=275.79  Aligned_cols=186  Identities=17%  Similarity=0.211  Sum_probs=156.6

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++||.+.   .|+|||||++|+|.+.+....+   .+++..+..++.||+.||.|||++||+||||||    ++.++.
T Consensus        73 Iv~~~g~~~~~~~~lv~e~~~~~~l~~~~~~~~~---~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~  149 (273)
T d1u46a_          73 LIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQG---HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL  149 (273)
T ss_dssp             BCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGG---GSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTE
T ss_pred             EEEEEEEEeecchheeeeeecCcchhhhhhcccC---CCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccc
Confidence            688898666   5899999999999955555555   799999999999999999999999999999999    788899


Q ss_pred             EEEecccccccccccccc---ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q psy3574          74 VKLADFGVSAQITATINK---RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFL  149 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~  149 (302)
                      +||+|||+++........   .....|+..|+|||++.   ...++.++|||||||++|||+| |..||.+.+..+....
T Consensus       150 vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~  226 (273)
T d1u46a_         150 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK---TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK  226 (273)
T ss_dssp             EEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHH---HCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH
T ss_pred             eeeccchhhhhcccCCCcceecCccccCcccCCHHHHh---CCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHH
Confidence            999999999876543221   22345788999999996   5668999999999999999998 8999999999998888


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         150 MSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       150 i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      +......++.   +..++..+.+||.+||..||++|||+.++++.|
T Consensus       227 i~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L  269 (273)
T d1u46a_         227 IDKEGERLPR---PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL  269 (273)
T ss_dssp             HHTSCCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHhCCCCCCC---cccccHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            8776654443   467899999999999999999999999998744

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-39  Score=276.93  Aligned_cols=186  Identities=18%  Similarity=0.221  Sum_probs=145.7

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++|+.+.   .|+|||||++|+|. .++.... ...+++.++..++.||+.||+|||++||+||||||    ++.++.
T Consensus        74 Iv~~~g~~~~~~~~lv~Ey~~~g~l~-~~~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~  151 (285)
T d1fmka3          74 LVQLYAVVSEEPIYIVTEYMSKGSLL-DFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV  151 (285)
T ss_dssp             BCCEEEEECSSSCEEEECCCTTCBHH-HHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC
T ss_pred             EeEEEEEEecCCeEEEEEecCCCchh-hhhhhcc-cccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCc
Confidence            688888776   48999999999998 5554321 12699999999999999999999999999999999    888899


Q ss_pred             EEEeccccccccccccc-cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCC-CCCCCChHHHHHHHH
Q psy3574          74 VKLADFGVSAQITATIN-KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQP-PMFDLHPMRALFLMS  151 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~-pf~~~~~~~~~~~i~  151 (302)
                      +||+|||+|+....... ......||+.|+|||++.   ...++.++||||+||++|||++|.. |+.+....+.+..+.
T Consensus       152 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~  228 (285)
T d1fmka3         152 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL---YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE  228 (285)
T ss_dssp             EEECCCCTTC--------------CCGGGSCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred             EEEcccchhhhccCCCceeeccccccccccChHHHh---CCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            99999999987654322 223456899999999995   6778999999999999999999654 455566666666655


Q ss_pred             hcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         152 KSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       152 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ... .++   .+..++.++.+||.+||+.||++||+++++++.+
T Consensus       229 ~~~-~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L  268 (285)
T d1fmka3         229 RGY-RMP---CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL  268 (285)
T ss_dssp             TTC-CCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             hcC-CCC---CCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHH
Confidence            443 222   2467899999999999999999999999998744

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-39  Score=279.54  Aligned_cols=178  Identities=17%  Similarity=0.162  Sum_probs=143.8

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEecccccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLADFGVSAQI   85 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~   85 (302)
                      .|+|||||.++.+. .+.....   .+++..++.+++||+.||.|||++||+||||||    ++.++.+||+|||+++..
T Consensus        92 ~~iv~e~~~~~~~~-~~~~~~~---~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~  167 (318)
T d3blha1          92 IYLVFDFCEHDLAG-LLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF  167 (318)
T ss_dssp             EEEEEECCCEEHHH-HHTCTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEeccCCCccc-hhhhccc---ccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeec
Confidence            58999999987766 5544444   799999999999999999999999999999999    888999999999999766


Q ss_pred             cccc----ccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCC
Q psy3574          86 TATI----NKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALK  161 (302)
Q Consensus        86 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  161 (302)
                      ....    ....+.+||+.|+|||++.  ....|+.++||||+||++|+|++|+.||.+.+.......+......++...
T Consensus       168 ~~~~~~~~~~~~~~~gT~~Y~aPE~~~--~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  245 (318)
T d3blha1         168 SLAKNSQPNRYTNRVVTLWYRPPELLL--GERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV  245 (318)
T ss_dssp             CC-----CCCCCSCCSCGGGCCHHHHT--TCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred             ccccccccccccceecCHHHhhHHHHc--CCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhh
Confidence            5321    2234467999999999986  244689999999999999999999999998888877766655322222111


Q ss_pred             CC---------------------------CCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         162 DK---------------------------DRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       162 ~~---------------------------~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..                           ...++.+.|||.+||+.||++|||++|+|+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         246 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             STTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence            00                           012677899999999999999999999999

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-39  Score=281.91  Aligned_cols=186  Identities=21%  Similarity=0.258  Sum_probs=149.0

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----C
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----K   68 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~   68 (302)
                      ||++|+.+.        .+++++|+.||+|. +++..+    .+++..++.++.||+.||+|||++||+||||||    +
T Consensus        68 iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~-~~l~~~----~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl  142 (345)
T d1pmea_          68 IIGINDIIRAPTIEQMKDVYLVTHLMGADLY-KLLKTQ----HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL  142 (345)
T ss_dssp             BCCCCEEECCSSTTTCCCEEEEEECCCEEHH-HHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             CCcEEEEEeeccccccceEEEEEeecCCchh-hhhhcC----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEE
Confidence            467777653        25666778899999 888654    499999999999999999999999999999999    8


Q ss_pred             CCCCCEEEeccccccccccccc---cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q psy3574          69 DRCGDVKLADFGVSAQITATIN---KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMR  145 (302)
Q Consensus        69 ~~~~~ikL~DFg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  145 (302)
                      +.+|.+||+|||+|+.......   .....+||+.|+|||++.  ....|+.++||||+||++|+|++|+.||.+.+...
T Consensus       143 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~--~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~  220 (345)
T d1pmea_         143 NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD  220 (345)
T ss_dssp             CTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTT--TBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             CCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhh--cCCCCCchhhhhccCceehHHhhCCCCCCCCCHHH
Confidence            8899999999999987654322   234567999999999985  35567899999999999999999999998877665


Q ss_pred             HHHHHHhcCCCC--------------------------CCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         146 ALFLMSKSGFKP--------------------------PALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       146 ~~~~i~~~~~~~--------------------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ...........+                          +.......++.++.+||.+||+.||.+|||++++|+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~  294 (345)
T d1pmea_         221 QLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  294 (345)
T ss_dssp             HHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            555443311111                          000113457889999999999999999999999999

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-38  Score=277.27  Aligned_cols=186  Identities=15%  Similarity=0.130  Sum_probs=153.0

Q ss_pred             Cchhhhcch---heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCC
Q psy3574           1 MSRVFNHFL---QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGD   73 (302)
Q Consensus         1 iv~~~~~~~---~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~   73 (302)
                      ||++|+.+.   .++++||+.+|+|.+.+.....   .+++..+..++.||+.||+|||++||+||||||    ++.+++
T Consensus        73 Iv~l~g~~~~~~~~~v~e~~~~~~l~~~~~~~~~---~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~  149 (317)
T d1xkka_          73 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH  149 (317)
T ss_dssp             BCCEEEEEESSSEEEEEECCTTCBHHHHHHHTSS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTE
T ss_pred             EeeEEEEEecCCeeEEEEeccCCccccccccccc---CCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCC
Confidence            688888776   4899999999999944544444   799999999999999999999999999999999    888999


Q ss_pred             EEEecccccccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          74 VKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        74 ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      +||+|||+|+........  .....||+.|||||++.   +..|+.++|||||||++|||+| |.+||.+.+..+....+
T Consensus       150 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~---~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i  226 (317)
T d1xkka_         150 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL---HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL  226 (317)
T ss_dssp             EEECCCSHHHHTTTTCC--------CCTTTSCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHH
T ss_pred             eEeeccccceecccccccccccccccCccccChHHHh---cCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Confidence            999999999876543222  22346899999999996   6679999999999999999998 89999887777666555


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .... .++   .+..++..+.+||.+||..||.+|||+.++++++.
T Consensus       227 ~~~~-~~~---~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~  268 (317)
T d1xkka_         227 EKGE-RLP---QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS  268 (317)
T ss_dssp             HHTC-CCC---CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HcCC-CCC---CCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHH
Confidence            5543 222   24678999999999999999999999999999554

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1e-38  Score=279.09  Aligned_cols=183  Identities=15%  Similarity=0.247  Sum_probs=142.7

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCC
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDR   70 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~   70 (302)
                      ||++++.|.      .|+|||||.+|+|. .+.   .   .+++..++.+++||+.||+|||++||+||||||    ++.
T Consensus        92 Iv~~~~~~~~~~~~~~~~v~e~~~~~~L~-~~~---~---~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~  164 (328)
T d3bqca1          92 IITLADIVKDPVSRTPALVFEHVNNTDFK-QLY---Q---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH  164 (328)
T ss_dssp             BCCEEEEEECTTTCSEEEEEECCCSCBGG-GTT---T---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET
T ss_pred             CcEEEEEEEecCCCceeEEEeecCCCcHH-HHh---c---CCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcC
Confidence            567777664      58999999999998 442   2   699999999999999999999999999999999    544


Q ss_pred             -CCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHH
Q psy3574          71 -CGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPM-RALF  148 (302)
Q Consensus        71 -~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~  148 (302)
                       ++.+||+|||+|+..... ......+||+.|+|||++.  ....|+.++|+||+||++|+|++|+.||...... ....
T Consensus       165 ~~~~vkl~DFG~a~~~~~~-~~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~  241 (328)
T d3bqca1         165 EHRKLRLIDWGLAEFYHPG-QEYNVRVASRYFKGPELLV--DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV  241 (328)
T ss_dssp             TTTEEEECCGGGCEECCTT-CCCCSCCSCGGGCCHHHHT--TCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHH
T ss_pred             CCCeeeecccccceeccCC-CcccccccCccccCccccc--CCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHH
Confidence             456999999999876654 3345668999999999986  2445899999999999999999999999765432 2222


Q ss_pred             HHHh-------------cCCCC-------------------CCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         149 LMSK-------------SGFKP-------------------PALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       149 ~i~~-------------~~~~~-------------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .+..             .....                   ........+++++.+||++||..||++|||++|+|+
T Consensus       242 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         242 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             HHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            2111             00000                   001112347899999999999999999999999999

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-38  Score=270.97  Aligned_cols=187  Identities=17%  Similarity=0.199  Sum_probs=156.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-------------cccccccchhHHHhhHHHHHHHHHhCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-------------AIELAELQPPMFDLHPMRALFLMSKSGFKPP   63 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hr   63 (302)
                      ||++|+.+.    .|+|||||++|+|. +++.....             ...+++.++..++.||+.||+|||++||+||
T Consensus        81 Iv~~~~~~~~~~~~~~v~e~~~~g~l~-~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHr  159 (299)
T d1fgka_          81 IINLLGACTQDGPLYVIVEYASKGNLR-EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR  159 (299)
T ss_dssp             BCCEEEEECSSSSCEEEECCCTTCBHH-HHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             EEecccccccCCeEEEEEEccCCCcHH-HHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEee
Confidence            678888777    58999999999999 77754421             1258999999999999999999999999999


Q ss_pred             CCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCC
Q psy3574          64 ALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQP  136 (302)
Q Consensus        64 dlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~  136 (302)
                      ||||    ++.++.+||+|||+++.......  ......|++.|+|||.+.   ...|+.++|||||||++|||++ |.+
T Consensus       160 DiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~---~~~y~~k~DiwS~Gvvl~ell~~g~~  236 (299)
T d1fgka_         160 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF---DRIYTHQSDVWSFGVLLWEIFTLGGS  236 (299)
T ss_dssp             CCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             eecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhc---CCCCCchhhhHHhHHHHHHhccCCCC
Confidence            9999    78899999999999987765422  223457899999999996   6779999999999999999998 788


Q ss_pred             CCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         137 PMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       137 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ||.+.+.......+... ..++   .+..+++.+.+||.+||+.||.+|||+.++++.|
T Consensus       237 p~~~~~~~~~~~~i~~~-~~~~---~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L  291 (299)
T d1fgka_         237 PYPGVPVEELFKLLKEG-HRMD---KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL  291 (299)
T ss_dssp             SSTTCCHHHHHHHHHTT-CCCC---CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHcC-CCCC---CCccchHHHHHHHHHHccCCHhHCcCHHHHHHHH
Confidence            98888877766555543 2222   3467899999999999999999999999999855

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-38  Score=267.17  Aligned_cols=184  Identities=16%  Similarity=0.165  Sum_probs=148.0

Q ss_pred             Cchhhhcch-----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL-----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~-----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++||.+.     +|+||||+++|+|. +++.... ...+++..+..++.||+.||.|||+++|+||||||    ++.+
T Consensus        62 Iv~~~g~~~~~~~~~~lv~ey~~~g~L~-~~l~~~~-~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~  139 (262)
T d1byga_          62 LVQLLGVIVEEKGGLYIVTEYMAKGSLV-DYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED  139 (262)
T ss_dssp             BCCEEEEECCC--CCEEEECCCTTEEHH-HHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred             EeeEEEEEEecCCcEEEEEeccCCCCHH-HHHHhcC-CCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCC
Confidence            688888764     58999999999999 6665432 22589999999999999999999999999999999    8889


Q ss_pred             CCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy3574          72 GDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-LQPPMFDLHPMRALFLM  150 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  150 (302)
                      |.+||+|||+++.....   .....++..|+|||++.   +..++.++|||||||++|||+| |++||...+..+....+
T Consensus       140 ~~~kl~dfg~s~~~~~~---~~~~~~~~~y~aPE~l~---~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i  213 (262)
T d1byga_         140 NVAKVSDFGLTKEASST---QDTGKLPVKWTAPEALR---EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV  213 (262)
T ss_dssp             SCEEECCCCC---------------CCTTTSCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH
T ss_pred             CCEeecccccceecCCC---CccccccccCCChHHHh---CCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Confidence            99999999999876542   23446889999999996   6679999999999999999998 78888888777776666


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      .... .++   .+..+++++.+||.+||..||.+|||+.++++.|-
T Consensus       214 ~~~~-~~~---~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~  255 (262)
T d1byga_         214 EKGY-KMD---APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE  255 (262)
T ss_dssp             TTTC-CCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HcCC-CCC---CCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence            5432 222   24668999999999999999999999999998553

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-38  Score=273.97  Aligned_cols=186  Identities=19%  Similarity=0.205  Sum_probs=153.2

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc-------------ccccccccchhHHHhhHHHHHHHHHhCCCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI-------------TAIELAELQPPMFDLHPMRALFLMSKSGFKPP   63 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hr   63 (302)
                      ||++|+.+.    +|+||||++||+|. +++....             ....+++..+..++.||+.||.|||+++|+||
T Consensus        73 Iv~~~~~~~~~~~~~iV~ey~~~g~L~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHr  151 (309)
T d1fvra_          73 IINLLGACEHRGYLYLAIEYAPHGNLL-DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHR  151 (309)
T ss_dssp             BCCEEEEEEETTEEEEEECCCTTCBHH-HHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             EeeEEEEEecCCeeEEEEEecCCCcHH-HHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCcccc
Confidence            688898776    59999999999999 7776431             12368999999999999999999999999999


Q ss_pred             CCcC----CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCC-CCC
Q psy3574          64 ALKD----KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQ-PPM  138 (302)
Q Consensus        64 dlkp----~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~-~pf  138 (302)
                      ||||    ++.++.+||+|||+|+..... .......||..|+|||.+.   ...|+.++|||||||++|||++|. +||
T Consensus       152 Dlkp~NIL~~~~~~~kl~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~l~---~~~~~~~sDvwSfGvil~ell~~~~~p~  227 (309)
T d1fvra_         152 DLAARNILVGENYVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLN---YSVYTTNSDVWSYGVLLWEIVSLGGTPY  227 (309)
T ss_dssp             CCSGGGEEECGGGCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHH---HCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             ccccceEEEcCCCceEEcccccccccccc-ccccceecCCcccchHHhc---cCCCCccceeehhHHHHHHHHhcCCCCC
Confidence            9999    788899999999999766543 2333456899999999996   667899999999999999999965 578


Q ss_pred             CCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         139 FDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       139 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .+.+..+....+.... .+   ..+..+++++.+||.+||+.||++|||+.+++++|
T Consensus       228 ~~~~~~~~~~~i~~~~-~~---~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L  280 (309)
T d1fvra_         228 CGMTCAELYEKLPQGY-RL---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL  280 (309)
T ss_dssp             TTCCHHHHHHHGGGTC-CC---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCHHHHHHHHHhcC-CC---CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            7888777777666543 22   22467899999999999999999999999999943

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-38  Score=268.99  Aligned_cols=187  Identities=19%  Similarity=0.216  Sum_probs=151.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCG   72 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~   72 (302)
                      ||++++.|.    .++|+|++.|++|. .++...+   .+++..++.++.|++.||+|||++||+||||||    ++.++
T Consensus        63 iv~~~~~~~~~~~~~iv~~~~~~~~l~-~~~~~~~---~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~  138 (292)
T d1unla_          63 IVRLHDVLHSDKKLTLVFEFCDQDLKK-YFDSCNG---DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG  138 (292)
T ss_dssp             BCCEEEEEECSSEEEEEEECCSEEHHH-HHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             EEeeccccccccceeEEeeeccccccc-ccccccc---ccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCC
Confidence            466777666    48999999999988 7777776   899999999999999999999999999999999    78889


Q ss_pred             CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHH
Q psy3574          73 DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDL-HPMRALFLMS  151 (302)
Q Consensus        73 ~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-~~~~~~~~i~  151 (302)
                      .+||+|||.|+.............+++.|+|||++.  ....++.++||||+||++|+|++|+.||... +..+....+.
T Consensus       139 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~  216 (292)
T d1unla_         139 ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLF--GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF  216 (292)
T ss_dssp             CEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHT--TCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHH
T ss_pred             ceeeeecchhhcccCCCccceeeccccchhhhhHhc--cCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHH
Confidence            999999999988776555555567889999999986  2344789999999999999999999986544 4444444443


Q ss_pred             hcCCCC------------------------CCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         152 KSGFKP------------------------PALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       152 ~~~~~~------------------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....+                        ........+++.+.+||++||+.||.+|||++|+|+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         217 RLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            311111                        111123456889999999999999999999999999

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-38  Score=278.50  Aligned_cols=183  Identities=21%  Similarity=0.258  Sum_probs=146.6

Q ss_pred             Cchhhhcch---------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----
Q psy3574           1 MSRVFNHFL---------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----   67 (302)
Q Consensus         1 iv~~~~~~~---------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----   67 (302)
                      ||++++.|.         .++||+|+.||+|. +++..+    ++++.+++.+++||+.||+|||++||+||||||    
T Consensus        79 iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~-~~~~~~----~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NIL  153 (348)
T d2gfsa1          79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQ----KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA  153 (348)
T ss_dssp             BCCCSEEECSCSSTTTCCCCEEEEECCSEEHH-HHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred             eeeEEEEEeeccccccCceEEEEEeecCCchh-hhcccc----cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccc
Confidence            467776653         36778888999999 777554    599999999999999999999999999999999    


Q ss_pred             CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy3574          68 KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRAL  147 (302)
Q Consensus        68 ~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  147 (302)
                      ++.+|.+|++|||++.....   ...+..|++.|+|||++.  ....++.++|||||||++|+|++|++||.+.+.....
T Consensus       154 i~~~~~~kl~dfg~a~~~~~---~~~~~~g~~~y~apE~~~--~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~  228 (348)
T d2gfsa1         154 VNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL  228 (348)
T ss_dssp             ECTTCCEEECCC----CCTG---GGSSSCHHHHTSCHHHHT--TCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             ccccccccccccchhcccCc---ccccccccccccCchhhc--CCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHH
Confidence            88899999999999876653   334567899999999976  2445689999999999999999999999988877777


Q ss_pred             HHHHhcCCCCCC-----------------------C---CCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         148 FLMSKSGFKPPA-----------------------L---KDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       148 ~~i~~~~~~~~~-----------------------~---~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      ..+......++.                       .   .....+++++++||.+||..||.+|||+.|+|+
T Consensus       229 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         229 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             HHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence            666553222110                       0   012357899999999999999999999999999

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.1e-37  Score=266.35  Aligned_cols=187  Identities=16%  Similarity=0.230  Sum_probs=153.0

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc---------------------cccccccchhHHHhhHHHHHHHH
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT---------------------AIELAELQPPMFDLHPMRALFLM   55 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~---------------------~~~l~~~~~~~i~~qi~~aL~~l   55 (302)
                      ||++++.+.    .++||||+++|+|. +++.....                     ...+++..+..|+.||+.||+||
T Consensus        78 iv~~~~~~~~~~~~~~v~e~~~~g~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yl  156 (301)
T d1lufa_          78 IVKLLGVCAVGKPMCLLFEYMAYGDLN-EFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL  156 (301)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHH-HHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cccceeeeccCCceEEEEEecCCCcHH-HHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhc
Confidence            467777766    48999999999999 66654220                     12478889999999999999999


Q ss_pred             HhCCCCCCCCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHH
Q psy3574          56 SKSGFKPPALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAI  129 (302)
Q Consensus        56 H~~~i~Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~  129 (302)
                      |+++|+||||||    ++.++.+||+|||+|+.......  ...+..|++.|+|||.+.   ...|+.++|||||||++|
T Consensus       157 H~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~t~ksDVwS~Gvvl~  233 (301)
T d1lufa_         157 SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF---YNRYTTESDVWAYGVVLW  233 (301)
T ss_dssp             HHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH---HCCCCHHHHHHHHHHHHH
T ss_pred             ccCCeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHc---cCCCChhhhhccchhhHH
Confidence            999999999999    88899999999999986644322  223457889999999996   677999999999999999


Q ss_pred             HHHhCC-CCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         130 ELAELQ-PPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       130 ell~g~-~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ||++|. +||.+.+..+....+......    ..+..+++++.+||.+||+.+|++|||+.++++.|
T Consensus       234 ell~~~~~p~~~~~~~e~~~~v~~~~~~----~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L  296 (301)
T d1lufa_         234 EIFSYGLQPYYGMAHEEVIYYVRDGNIL----ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRIL  296 (301)
T ss_dssp             HHHTTTCCTTTTSCHHHHHHHHHTTCCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHccCCCCCCCCCHHHHHHHHHcCCCC----CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            999985 688888888887777665432    22467899999999999999999999999998733

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-37  Score=274.94  Aligned_cols=182  Identities=21%  Similarity=0.240  Sum_probs=137.3

Q ss_pred             Cchhhhcch----------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC---
Q psy3574           1 MSRVFNHFL----------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD---   67 (302)
Q Consensus         1 iv~~~~~~~----------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp---   67 (302)
                      ||++|+.|.          .|+|||||.|+.+. .+   ..   .+++..++.+++||+.||+|||++||+||||||   
T Consensus        78 Iv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~-~~---~~---~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Ni  150 (355)
T d2b1pa1          78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ-VI---QM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI  150 (355)
T ss_dssp             BCCCSEEECSCCSTTTCCEEEEEEECCSEEHHH-HH---TS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred             eeEEEEEEecccccccCceeEEEEeccchHHHH-hh---hc---CCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccc
Confidence            578888773          48999999875554 33   23   589999999999999999999999999999999   


Q ss_pred             -CCCCCCEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH
Q psy3574          68 -KDRCGDVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRA  146 (302)
Q Consensus        68 -~~~~~~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  146 (302)
                       ++.++.+|++|||+++..... ......+||+.|+|||++.   +..++.++||||+||++|+|++|++||.+.+....
T Consensus       151 l~~~~~~~kl~df~~~~~~~~~-~~~~~~~~t~~y~aPE~l~---~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~  226 (355)
T d2b1pa1         151 VVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVIL---GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ  226 (355)
T ss_dssp             EECTTCCEEECCCCC----------------CCTTCCHHHHT---TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ccccccceeeechhhhhccccc-cccccccccccccChhhhc---CCCCCCCcccccccchHHHHhhCCCCCCCCCHHHH
Confidence             788899999999998766554 3345567999999999996   67789999999999999999999999998877766


Q ss_pred             HHHHHhcCCCCC----------------------CCC---------------CCCCCCHHHHHHHHHhhhcCCCCCCCHH
Q psy3574         147 LFLMSKSGFKPP----------------------ALK---------------DKDRWSSTFHNFVKIALTKNPKKRPTAD  189 (302)
Q Consensus       147 ~~~i~~~~~~~~----------------------~~~---------------~~~~~s~~~~~li~~~L~~dp~~R~t~~  189 (302)
                      ...+......+.                      ...               .....++++.+||++||..||++|||++
T Consensus       227 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~  306 (355)
T d2b1pa1         227 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD  306 (355)
T ss_dssp             HHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             HHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHH
Confidence            655543211100                      000               0012367899999999999999999999


Q ss_pred             HHHH
Q psy3574         190 KLLQ  193 (302)
Q Consensus       190 ~ll~  193 (302)
                      |+|+
T Consensus       307 elL~  310 (355)
T d2b1pa1         307 DALQ  310 (355)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            9999

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-37  Score=268.04  Aligned_cols=188  Identities=19%  Similarity=0.252  Sum_probs=154.9

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhcc---------------ccccccccchhHHHhhHHHHHHHHHhCCCC
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGI---------------TAIELAELQPPMFDLHPMRALFLMSKSGFK   61 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~---------------~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~   61 (302)
                      ||++|+.+.    .|+|||||++|+|. .++....               ....+++..+..++.||+.||+|||++|++
T Consensus        89 Iv~~~g~~~~~~~~~lvmE~~~~g~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~iv  167 (311)
T d1t46a_          89 IVNLLGACTIGGPTLVITEYCCYGDLL-NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI  167 (311)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTEEHH-HHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             EEEEEEEEeeCCEEEEEEEcCCCCCHH-HHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            688999886    59999999999999 6665432               112588899999999999999999999999


Q ss_pred             CCCCcC----CCCCCCEEEeccccccccccccc--cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHh-C
Q psy3574          62 PPALKD----KDRCGDVKLADFGVSAQITATIN--KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAE-L  134 (302)
Q Consensus        62 Hrdlkp----~~~~~~ikL~DFg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g  134 (302)
                      ||||||    ++..+.+||+|||.++.......  .....+||+.|+|||++.   ...++.++|||||||++|||+| |
T Consensus       168 HrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DIwS~G~~l~ellt~g  244 (311)
T d1t46a_         168 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF---NCVYTFESDVWSYGIFLWELFSLG  244 (311)
T ss_dssp             CSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred             ecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhc---CCCCCCcccccchHHHHHHHHhCC
Confidence            999999    88899999999999987654322  223457899999999995   6778999999999999999998 6


Q ss_pred             CCCCCCCChHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         135 QPPMFDLHPMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       135 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      .+||.+.+....+..+...+..+..   +..++..+.+||.+||..||++|||+.++++.|
T Consensus       245 ~p~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L  302 (311)
T d1t46a_         245 SSPYPGMPVDSKFYKMIKEGFRMLS---PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI  302 (311)
T ss_dssp             CCSSTTCCSSHHHHHHHHHTCCCCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHhcCCCCCC---cccccHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            6667676666666666665544332   456799999999999999999999999999844

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-37  Score=264.25  Aligned_cols=187  Identities=18%  Similarity=0.244  Sum_probs=155.3

Q ss_pred             Cchhhhcch----heeEEEecCCcchHHHHHHhccc-------cccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC--
Q psy3574           1 MSRVFNHFL----QVAAVERKGGYNQQCDIWAVGIT-------AIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD--   67 (302)
Q Consensus         1 iv~~~~~~~----~~iv~E~~~~g~L~~~~~~~~~~-------~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp--   67 (302)
                      ||++++.+.    .++|||||++|+|. +++.....       ...+++..+..++.|++.||.|||+++|+||||||  
T Consensus        85 Iv~~~~~~~~~~~~~lv~e~~~~g~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~N  163 (308)
T d1p4oa_          85 VVRLLGVVSQGQPTLVIMELMTRGDLK-SYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARN  163 (308)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHH-HHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGG
T ss_pred             EeeeeeEEecCCceeEEEeecCCCCHH-HHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCc
Confidence            678888776    59999999999999 66654321       12357778899999999999999999999999999  


Q ss_pred             --CCCCCCEEEecccccccccccccc--ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCC
Q psy3574          68 --KDRCGDVKLADFGVSAQITATINK--RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAEL-QPPMFDLH  142 (302)
Q Consensus        68 --~~~~~~ikL~DFg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g-~~pf~~~~  142 (302)
                        ++.++++||+|||+|+........  .....||+.|+|||.+.   +..++.++|||||||++|||++| .+||.+.+
T Consensus       164 iLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~---~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~  240 (308)
T d1p4oa_         164 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK---DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS  240 (308)
T ss_dssp             EEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHH---HCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC
T ss_pred             eeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHc---cCCCCcccccccHHHHHHHHHhCCCCCCCCCC
Confidence              889999999999999876554222  23446899999999995   67789999999999999999998 58888888


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         143 PMRALFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       143 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ..+....+......    ..+..++..+.++|.+||+.||.+|||++++++.|
T Consensus       241 ~~~~~~~i~~~~~~----~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L  289 (308)
T d1p4oa_         241 NEQVLRFVMEGGLL----DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI  289 (308)
T ss_dssp             HHHHHHHHHTTCCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHHhCCCC----CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            88888777665432    22467899999999999999999999999999955

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-36  Score=263.54  Aligned_cols=185  Identities=14%  Similarity=0.182  Sum_probs=147.2

Q ss_pred             Cchhhhcch-----heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCC
Q psy3574           1 MSRVFNHFL-----QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRC   71 (302)
Q Consensus         1 iv~~~~~~~-----~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~   71 (302)
                      ||++||.+.     .|+|||||++|+|. +++....  ..+++..+..++.|++.||.|||+.+|+||||||    ++.+
T Consensus        90 Iv~~~g~~~~~~~~~~lv~E~~~~g~l~-~~~~~~~--~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~  166 (311)
T d1r0pa_          90 VLSLLGICLRSEGSPLVVLPYMKHGDLR-NFIRNET--HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK  166 (311)
T ss_dssp             BCCCCEEEEETTTEEEEEEECCTTCBHH-HHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred             EeEEeEEEEecCCceEEEEEEeecCchh-hhhcccc--ccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCC
Confidence            578888654     48999999999999 7666543  2577788899999999999999999999999999    8899


Q ss_pred             CCEEEecccccccccccccc----ccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-hHHH
Q psy3574          72 GDVKLADFGVSAQITATINK----RKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH-PMRA  146 (302)
Q Consensus        72 ~~ikL~DFg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~  146 (302)
                      +.+||+|||+++........    .....||..|+|||.+.   ...++.++||||||+++|||++|..||.... ..+.
T Consensus       167 ~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~  243 (311)
T d1r0pa_         167 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ---TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI  243 (311)
T ss_dssp             CCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHH---HCCCCHHHHHHHHHHHHHHHHTTSCCSCC------C
T ss_pred             CCEEEecccchhhccccccccceecccccccccccChHHHh---cCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHH
Confidence            99999999999876543221    22346899999999985   6678999999999999999999777775543 3333


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q psy3574         147 LFLMSKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQVI  195 (302)
Q Consensus       147 ~~~i~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l  195 (302)
                      ...+.... .++   .+..+++++.+||.+||+.||++||++.|++++|
T Consensus       244 ~~~i~~g~-~~~---~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L  288 (311)
T d1r0pa_         244 TVYLLQGR-RLL---QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI  288 (311)
T ss_dssp             HHHHHTTC-CCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHcCC-CCC---CcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence            44444332 222   3467899999999999999999999999999954

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.2e-35  Score=256.10  Aligned_cols=177  Identities=12%  Similarity=0.111  Sum_probs=135.1

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC-------CCCCCCEEEeccccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD-------KDRCGDVKLADFGVS   82 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp-------~~~~~~ikL~DFg~a   82 (302)
                      .|+||||+.+ +|...+.....   .+++..+..++.|++.||+|||++||+||||||       .+.+..+||+|||+|
T Consensus        78 ~~ivme~~~~-~l~~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a  153 (299)
T d1ckia_          78 NVMVMELLGP-SLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA  153 (299)
T ss_dssp             EEEEEECCCC-BHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSC
T ss_pred             EEEEEEEcCC-chhhhhhhccC---CCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcc
Confidence            5899999965 66624444454   799999999999999999999999999999999       234567999999999


Q ss_pred             cccccccc-------cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH---h
Q psy3574          83 AQITATIN-------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMS---K  152 (302)
Q Consensus        83 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~---~  152 (302)
                      +.......       .....+||+.|||||++.   +..|+.++|||||||++|+|++|+.||...........+.   .
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~  230 (299)
T d1ckia_         154 KKYRDARTHQHIPYRENKNLTGTARYASINTHL---GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE  230 (299)
T ss_dssp             EECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHT---TBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHH
T ss_pred             eeccccccccceeccccCCcCCCccccCHHHHh---CCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhc
Confidence            87754321       223567999999999996   6679999999999999999999999997755443332221   1


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         153 SGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       153 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .....+.......+++++.+||.+||..+|++||++.++.+
T Consensus       231 ~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~  271 (299)
T d1ckia_         231 KKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  271 (299)
T ss_dssp             HHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHH
T ss_pred             ccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            11111211223568999999999999999999999987755

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-35  Score=255.86  Aligned_cols=191  Identities=14%  Similarity=0.072  Sum_probs=142.1

Q ss_pred             Cchhhhcch--------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh--------CCCCCCC
Q psy3574           1 MSRVFNHFL--------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK--------SGFKPPA   64 (302)
Q Consensus         1 iv~~~~~~~--------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~--------~~i~Hrd   64 (302)
                      ||++|+.+.        +|+|||||++|+|. ++++..    ++++.++..++.|++.||+|||+        +||+|||
T Consensus        59 Iv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~-~~l~~~----~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrD  133 (303)
T d1vjya_          59 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLF-DYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD  133 (303)
T ss_dssp             BCCEEEEEEEECSSSEEEEEEEECCTTCBHH-HHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSC
T ss_pred             CcceEEEEEeCCCcceEEEEEEecccCCCHH-HHHhcC----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccc
Confidence            578888764        58999999999999 888765    48999999999999999999996        5999999


Q ss_pred             CcC----CCCCCCEEEeccccccccccccc----cccccccCcccchhhccccccc---CCCCchhhHHHHHHHHHHHHh
Q psy3574          65 LKD----KDRCGDVKLADFGVSAQITATIN----KRKSFIGTPYWMAPEVAAVERK---GGYNQQCDIWAVGITAIELAE  133 (302)
Q Consensus        65 lkp----~~~~~~ikL~DFg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~---~~~~~~~DiwslG~il~ell~  133 (302)
                      |||    ++.++.+||+|||+++.......    .....+||+.|||||++.....   ..++.++|||||||++|||+|
T Consensus       134 lKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~t  213 (303)
T d1vjya_         134 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR  213 (303)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCccceEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhh
Confidence            999    88999999999999987654322    2335679999999999853211   125678999999999999999


Q ss_pred             CCCCCCCC---------------ChHHHHHHHHhcCCCCCCCCC--CCCCCHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy3574         134 LQPPMFDL---------------HPMRALFLMSKSGFKPPALKD--KDRWSSTFHNFVKIALTKNPKKRPTADKLLQVIL  196 (302)
Q Consensus       134 g~~pf~~~---------------~~~~~~~~i~~~~~~~~~~~~--~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~~l~  196 (302)
                      |..||...               ...............++....  .......+.+|+.+||+.||++|||+.++++.|-
T Consensus       214 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~  293 (303)
T d1vjya_         214 RCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS  293 (303)
T ss_dssp             TBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence            98876321               122222222222222221111  1123356899999999999999999999988654

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=2.2e-34  Score=247.38  Aligned_cols=177  Identities=13%  Similarity=0.131  Sum_probs=138.4

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CC-----CCCCEEEeccc
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KD-----RCGDVKLADFG   80 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~-----~~~~ikL~DFg   80 (302)
                      .|+||||+ ||+|. +++...+  ..+++.++..++.|++.||+|||++||+||||||    ++     ..+.+||+|||
T Consensus        76 ~~~vme~~-~~~l~-~~~~~~~--~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG  151 (293)
T d1csna_          76 NVLVIDLL-GPSLE-DLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG  151 (293)
T ss_dssp             EEEEEECC-CCBHH-HHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred             cEEEEEec-CCCHH-HHHHhhc--cchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccc
Confidence            48999999 56998 6665543  2699999999999999999999999999999999    32     46889999999


Q ss_pred             cccccccccc-------cccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHH
Q psy3574          81 VSAQITATIN-------KRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLH---PMRALFLM  150 (302)
Q Consensus        81 ~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---~~~~~~~i  150 (302)
                      +|+.......       .....+||+.|||||++.   +..++.++|||||||++|+|++|..||.+..   .......+
T Consensus       152 ~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~---~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i  228 (293)
T d1csna_         152 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHL---GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI  228 (293)
T ss_dssp             TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHT---TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHH
T ss_pred             eeEEcccCccccceeecccCceEEchhhcCHHHhc---CCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHH
Confidence            9987654321       233567999999999996   6779999999999999999999999997543   33333333


Q ss_pred             HhcCCCCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCHHHHHH
Q psy3574         151 SKSGFKPPALKDKDRWSSTFHNFVKIALTKNPKKRPTADKLLQ  193 (302)
Q Consensus       151 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ll~  193 (302)
                      .......+.......+++++.+++..|+..+|++||+++.+.+
T Consensus       229 ~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~  271 (293)
T d1csna_         229 GEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  271 (293)
T ss_dssp             HHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            3222122222223567899999999999999999999887755

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.6e-32  Score=242.67  Aligned_cols=186  Identities=16%  Similarity=0.156  Sum_probs=131.1

Q ss_pred             Cchhhhcch------heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHh-CCCCCCCCcC----CC
Q psy3574           1 MSRVFNHFL------QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK-SGFKPPALKD----KD   69 (302)
Q Consensus         1 iv~~~~~~~------~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~i~Hrdlkp----~~   69 (302)
                      ||++++.+.      .+++++++..+........ ......+++..++.++.||+.||+|||+ .||+||||||    ++
T Consensus        82 iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~  160 (362)
T d1q8ya_          82 ILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIK-KYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME  160 (362)
T ss_dssp             BCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHH-HTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEE
T ss_pred             eEEEEEEeeeccccceeeeeeecccccccccccc-cccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeee
Confidence            466776664      2566776665544312222 2223478899999999999999999998 8999999999    33


Q ss_pred             CCC------CEEEeccccccccccccccccccccCcccchhhcccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh
Q psy3574          70 RCG------DVKLADFGVSAQITATINKRKSFIGTPYWMAPEVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHP  143 (302)
Q Consensus        70 ~~~------~ikL~DFg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  143 (302)
                      ..+      .+|++|||.+.....   .....+||+.|+|||++.   ...|+.++|+||+||++++|++|+.||.....
T Consensus       161 ~~~~~~~~~~~kl~dfg~s~~~~~---~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~  234 (362)
T d1q8ya_         161 IVDSPENLIQIKIADLGNACWYDE---HYTNSIQTREYRSPEVLL---GAPWGCGADIWSTACLIFELITGDFLFEPDEG  234 (362)
T ss_dssp             EEETTTTEEEEEECCCTTCEETTB---CCCSCCSCGGGCCHHHHH---TCCCCTHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred             ccCcccccceeeEeeccccccccc---ccccccccccccChhhcc---ccCCCccccccchHHHHHHHHHCCCCCCCCcc
Confidence            333      489999999976653   234567999999999986   66789999999999999999999999975432


Q ss_pred             H------HHHHHHHhc-CC-----------------------CCC-------------CCCCCCCCCHHHHHHHHHhhhc
Q psy3574         144 M------RALFLMSKS-GF-----------------------KPP-------------ALKDKDRWSSTFHNFVKIALTK  180 (302)
Q Consensus       144 ~------~~~~~i~~~-~~-----------------------~~~-------------~~~~~~~~s~~~~~li~~~L~~  180 (302)
                      .      ......... +.                       ...             ........++++.+||.+||..
T Consensus       235 ~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~  314 (362)
T d1q8ya_         235 HSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQL  314 (362)
T ss_dssp             ----CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCS
T ss_pred             ccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCC
Confidence            1      111111100 00                       000             0001123467899999999999


Q ss_pred             CCCCCCCHHHHHH
Q psy3574         181 NPKKRPTADKLLQ  193 (302)
Q Consensus       181 dp~~R~t~~~ll~  193 (302)
                      ||.+|||++|+|+
T Consensus       315 dP~~Rpta~e~L~  327 (362)
T d1q8ya_         315 DPRKRADAGGLVN  327 (362)
T ss_dssp             STTTCBCHHHHHT
T ss_pred             ChhHCcCHHHHhc
Confidence            9999999999999

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.47  E-value=4.3e-15  Score=118.10  Aligned_cols=100  Identities=11%  Similarity=0.004  Sum_probs=72.8

Q ss_pred             hhhhcchheeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhCCCCCCCCcC----CCCCCCEEEec
Q psy3574           3 RVFNHFLQVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSGFKPPALKD----KDRCGDVKLAD   78 (302)
Q Consensus         3 ~~~~~~~~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i~Hrdlkp----~~~~~~ikL~D   78 (302)
                      +.|+....++||||++++.+.           .+++..+..++.|++.||.|||++||+||||||    ++ .+.++|+|
T Consensus        78 ~~~~~~~~~lvme~~~~~~~~-----------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~-~~~~~liD  145 (191)
T d1zara2          78 KVYAWEGNAVLMELIDAKELY-----------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIID  145 (191)
T ss_dssp             CEEEEETTEEEEECCCCEEGG-----------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECC
T ss_pred             eEEEecCCEEEEEeecccccc-----------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeee-CCCEEEEE
Confidence            334444458999999987654           477788899999999999999999999999999    44 45699999


Q ss_pred             cccccccccccccccccccCcccchh------hcccccccCCCCchhhHHHHHH
Q psy3574          79 FGVSAQITATINKRKSFIGTPYWMAP------EVAAVERKGGYNQQCDIWAVGI  126 (302)
Q Consensus        79 Fg~a~~~~~~~~~~~~~~gt~~y~aP------E~~~~~~~~~~~~~~DiwslG~  126 (302)
                      ||.|.........        .|...      +.+    .+.|+..+|+||+.-
T Consensus       146 FG~a~~~~~~~~~--------~~l~rd~~~~~~~f----~r~y~~~~d~~s~~~  187 (191)
T d1zara2         146 FPQSVEVGEEGWR--------EILERDVRNIITYF----SRTYRTEKDINSAID  187 (191)
T ss_dssp             CTTCEETTSTTHH--------HHHHHHHHHHHHHH----HHHHCCCCCHHHHHH
T ss_pred             CCCcccCCCCCcH--------HHHHHHHHHHHHHH----cCCCCCcccHHHHHH
Confidence            9998765432111        11111      112    244788899999754

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=82.91  E-value=0.45  Score=36.90  Aligned_cols=40  Identities=10%  Similarity=-0.001  Sum_probs=25.9

Q ss_pred             heeEEEecCCcchHHHHHHhccccccccccchhHHHhhHHHHHHHHHhC
Q psy3574          10 QVAAVERKGGYNQQCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS   58 (302)
Q Consensus        10 ~~iv~E~~~~g~L~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~   58 (302)
                      .|+||++++|.++. ...        .+......+..++...++.||+.
T Consensus        85 ~~lv~~~l~G~~~~-~~~--------~~~~~~~~~~~~l~~~l~~lH~~  124 (263)
T d1j7la_          85 SNLLMSEADGVLCS-EEY--------EDEQSPEKIIELYAECIRLFHSI  124 (263)
T ss_dssp             EEEEEECCSSEEHH-HHT--------TTCSCHHHHHHHHHHHHHHHHTS
T ss_pred             eEEEEEeccccccc-ccc--------cccccHHHHHHHHHHHHHHHhcc
Confidence            47999999998876 221        22334455666667777777754