Psyllid ID: psy360

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
Protein Sequence
MQCNKSYVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAGPKVVFQPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT
Secondary Structure (PSIPRED)
cccccccccEEEccccccccHHHHHccccccccEEEEEEEEEEcccccccccccccccccccEEEEEccccccccccccccccccccccccccccccHHHHccccccccccHHHccccccccEEEEEEccccEEEEEEEEccccccHHHHHHHHHHHHHHHccccccEEEEEEEEEEEcccccEEEEEEEEEccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHcHcccccHHHccHHHHHHHHcHHHHHHHHHHHHHHHHHccccccHcccHHHHHHHHccccccccHcccccccHHcccHHHHcccccccccEEEEcccccEcEEEHHHcccccEEEEEEcccccccEEEEHHHHcHHHcHHHHHHHHHHHHHHHccccccEEEEEcccccccccccEEEEEEEEcccccccc
Coil and Loop (DISEMBL)
mqcnksyvnirtqrtpefmapemyeehydESVDVYAFGMCMLemstseypymecigpaqIYKKVVSVSItsagpkvvfqpisgvkpqsfervespevkeEERESMRGYLKFEeeigrgsfktvyrglDTQTGVAVAWCELQEKKLNKAERARFREEAEMLkglqhpnivsfYGYWEVTLTKRKYIVLVTELMTSGTLKT
Flexible Loop (DISEMBL)
mqcnksyvnirtqrtpefmaPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAgpkvvfqpisgvkpqsfervespevkeeeresmrgylkfeeeigrgsfktVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEmlkglqhpnivSFYGYWEVTLTKRKYIVLVTelmtsgtlkt
Low Complexity Region (SEG)
MQCNKSYVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAGPKVVFQPISGVKPQSFervespevkeeeresMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKaerarfreeaeMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT
Disordered region (IsUnstruct)
*********************EMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAGPKVVFQPI**************************YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN******F***AEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELM*******
Disordered Region (DISOPRED)
*************RTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECI******KKVVSVSITSAGPKVVFQ*****************VKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQ***********FREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGT***
Disordered Region (DISEMBL)
MQCNKSYVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAGPKVVFQPISGVKPQSF***************MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT
Disordered Region (DISPRO)
*********IRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAGPKVVFQPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTS*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQCNKSYVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAGPKVVFQPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWxxxxxxxxxxxxxxxxxxxxxMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	199	2.2.26 [Sep-21-2011]
Q9JIH7	2126	Serine/threonine-protein	yes	N/A	0.316	0.029	0.760	2e-37
Q80XP9	1757	Serine/threonine-protein	no	N/A	0.316	0.035	0.75	4e-36
Q9BYP7	1800	Serine/threonine-protein	no	N/A	0.316	0.035	0.739	2e-35
P83741	2377	Serine/threonine-protein	no	N/A	0.432	0.036	0.643	2e-34
Q80UE6	1222	Serine/threonine-protein	no	N/A	0.381	0.062	0.75	2e-34
Q9H4A3	2382	Serine/threonine-protein	no	N/A	0.432	0.036	0.643	2e-34
Q7TPK6	1222	Serine/threonine-protein	no	N/A	0.381	0.062	0.75	2e-34
Q96J92	1243	Serine/threonine-protein	no	N/A	0.381	0.061	0.75	3e-34
Q9Y3S1	2297	Serine/threonine-protein	no	N/A	0.316	0.027	0.728	2e-33
Q3UH66	2149	Serine/threonine-protein	no	N/A	0.316	0.029	0.728	2e-33

>sp|Q9JIH7|WNK1_RAT Serine/threonine-protein kinase WNK1 OS=Rattus norvegicus GN=Wnk1 PE=1 SV=2

 Score =  155 bits (391), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 70/92 (76%), Positives = 80/92 (86%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           +LKF+ EIGRGSFKTVY+GLDT+T V VAWCELQ++KL K+ER RF+EEAEMLKGLQHPN
Sbjct: 220 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN 279

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY  WE T+  +K IVLVTELMTSGTLKT
Sbjct: 280 IVRFYDSWESTVKGKKCIVLVTELMTSGTLKT 311

Serine/threonine kinase which plays an important role in the regulation of electrolyte homeostasis, cell signaling, survival and proliferation. Acts as an activator and inhibitor of sodium-coupled chloride cotransporters and potassium-coupled chloride cotransporters respectively. Activates SCNN1A, SCNN1B, SCNN1D and SGK1. Controls sodium and chloride ion transport by inhibiting the activity of WNK4, by either phosphorylating the kinase or via an interaction between WNK4 and the autoinhibitory domain of WNK1. WNK4 regulates the activity of the thiazide-sensitive Na-Cl cotransporter, SLC12A3, by phosphorylation. WNK1 may also play a role in actin cytoskeletal reorganization. Phosphorylates NEDD4L.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q80XP9|WNK3_MOUSE Serine/threonine-protein kinase WNK3 OS=Mus musculus GN=Wnk3 PE=2 SV=3

 Score =  150 bits (380), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 69/92 (75%), Positives = 80/92 (86%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           +LKF+ E+GRG+FKTVY+GLDT+T V VAWCELQ++KL KAE+ RF+EEAEMLKGLQHPN
Sbjct: 145 FLKFDIELGRGAFKTVYKGLDTETWVEVAWCELQDRKLTKAEQQRFKEEAEMLKGLQHPN 204

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY  WE TL  +K IVLVTELMTSGTLKT
Sbjct: 205 IVRFYDSWESTLKGKKCIVLVTELMTSGTLKT 236

Serine/threonine kinase which plays an important role in the regulation of electrolyte homeostasis, cell signaling, survival and proliferation. Acts as an activator and inhibitor of sodium-coupled chloride cotransporters and potassium-coupled chloride cotransporters respectively. Activates SLC12A1, SLC12A2, SLC12A3, SCNN1A, SCNN1B, SCNN1D and SGK1. Inhibits SLC12A4, SLC12A5, SLC12A6 and SLC12A7. Phosphorylates WNK4. Increases Ca(2+) influx mediated by TRPV5 and TRPV6 by enhancing their membrane expression level via a kinase-dependent pathway. Inhibits KCNJ1 by decreasing its expression at the cell membrane in a non-catalytic manner.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9BYP7|WNK3_HUMAN Serine/threonine-protein kinase WNK3 OS=Homo sapiens GN=WNK3 PE=1 SV=3

 Score =  148 bits (374), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 68/92 (73%), Positives = 79/92 (85%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           +LKF+ E+GRG+FKTVY+GLDT+T V VAWCELQ++KL KAE+ RF+EEAEMLKGLQHPN
Sbjct: 146 FLKFDIELGRGAFKTVYKGLDTETWVEVAWCELQDRKLTKAEQQRFKEEAEMLKGLQHPN 205

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY  WE  L  +K IVLVTELMTSGTLKT
Sbjct: 206 IVRFYDSWESILKGKKCIVLVTELMTSGTLKT 237

Isoform 1, isoform 2, isoform 3 and isoform 4 stimulate the activity of SLC12A1, SLC12A2 and SLC12A3 and inhibit the activity of SLC12A4, SLC12A5, SLC12A6 and SLC12A7. According to PubMed:19470686, isoform 1 inhibits the activity of SLC12A3.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P83741|WNK1_MOUSE Serine/threonine-protein kinase WNK1 OS=Mus musculus GN=Wnk1 PE=1 SV=2

 Score =  145 bits (366), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 74/115 (64%), Positives = 88/115 (76%)

Query: 85  KPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK 144
           + Q  + +E  E K     +   +LKF+ EIGRGSFKTVY+GLDT+T V VAWCELQ++K
Sbjct: 197 RSQQQDDIEELETKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK 256

Query: 145 LNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           L K+ER RF+EEAEMLKGLQHPNIV FY  WE T+  +K IVLVTELMTSGTLKT
Sbjct: 257 LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKT 311

Serine/threonine kinase which plays an important role in the regulation of electrolyte homeostasis, cell signaling, survival, and proliferation. Acts as an activator and inhibitor of sodium-coupled chloride cotransporters and potassium-coupled chloride cotransporters respectively. Activates SCNN1A, SCNN1B, SCNN1D and SGK1. Controls sodium and chloride ion transport by inhibiting the activity of WNK4, by either phosphorylating the kinase or via an interaction between WNK4 and the autoinhibitory domain of WNK1. WNK4 regulates the activity of the thiazide-sensitive Na-Cl cotransporter, SLC12A3, by phosphorylation. WNK1 may also play a role in actin cytoskeletal reorganization. Phosphorylates NEDD4L.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q80UE6|WNK4_MOUSE Serine/threonine-protein kinase WNK4 OS=Mus musculus GN=Wnk4 PE=1 SV=1

 Score =  145 bits (366), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/92 (75%), Positives = 75/92 (81%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           YLKF+ EIGRGSFKTVYRGLDT T V VAWCELQ +KL++AER RF EE EMLKGLQHPN
Sbjct: 170 YLKFDIEIGRGSFKTVYRGLDTDTTVEVAWCELQTRKLSRAERQRFSEEVEMLKGLQHPN 229

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY  W+  L  +  IVLVTELMTSGTLKT
Sbjct: 230 IVRFYDSWKSVLRGQVCIVLVTELMTSGTLKT 261

Serine/threonine kinase which plays an important role in the regulation of electrolyte homeostasis, cell signaling, survival and proliferation. Acts as an activator and inhibitor of sodium-coupled chloride cotransporters and potassium-coupled chloride cotransporters respectively. Activates SCNN1A, SCNN1B, SCNN1D, SGK1, TRPV5 and TRPV6. Regulates the activity of the thiazide-sensitive Na-Cl cotransporter, SLC12A3, by phosphorylation which appears to prevent membrane trafficking of SLC12A3. Also inhibits the renal K(+) channel, KCNJ1, via a kinase-independent mechanism by which it induces clearance of the protein from the cell surface by clathrin-dependent endocytosis. WNK4 appears to act as a molecular switch that can vary the balance between NaCl reabsorption and K(+) secretion to maintain integrated homeostasis. Phosphorylates NEDD4L.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9H4A3|WNK1_HUMAN Serine/threonine-protein kinase WNK1 OS=Homo sapiens GN=WNK1 PE=1 SV=2

 Score =  145 bits (365), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 74/115 (64%), Positives = 88/115 (76%)

Query: 85  KPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK 144
           + Q  + +E  E K     +   +LKF+ EIGRGSFKTVY+GLDT+T V VAWCELQ++K
Sbjct: 197 RSQQQDDIEELETKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK 256

Query: 145 LNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           L K+ER RF+EEAEMLKGLQHPNIV FY  WE T+  +K IVLVTELMTSGTLKT
Sbjct: 257 LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKT 311

Serine/threonine kinase which plays an important role in the regulation of electrolyte homeostasis, cell signaling, survival, and proliferation. Acts as an activator and inhibitor of sodium-coupled chloride cotransporters and potassium-coupled chloride cotransporters respectively. Activates SCNN1A, SCNN1B, SCNN1D and SGK1. Controls sodium and chloride ion transport by inhibiting the activity of WNK4, by either phosphorylating the kinase or via an interaction between WNK4 and the autoinhibitory domain of WNK1. WNK4 regulates the activity of the thiazide-sensitive Na-Cl cotransporter, SLC12A3, by phosphorylation. WNK1 may also play a role in actin cytoskeletal reorganization. Phosphorylates NEDD4L.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q7TPK6|WNK4_RAT Serine/threonine-protein kinase WNK4 OS=Rattus norvegicus GN=Wnk4 PE=2 SV=3

 Score =  145 bits (365), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/92 (75%), Positives = 75/92 (81%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           YLKF+ EIGRGSFKTVYRGLDT T V VAWCELQ +KL++AER RF EE EMLKGLQHPN
Sbjct: 170 YLKFDIEIGRGSFKTVYRGLDTDTTVEVAWCELQTRKLSRAERQRFSEEVEMLKGLQHPN 229

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY  W+  L  +  IVLVTELMTSGTLKT
Sbjct: 230 IVRFYDSWKSVLRGQVCIVLVTELMTSGTLKT 261

Serine/threonine kinase which plays an important role in the regulation of electrolyte homeostasis, cell signaling, survival and proliferation. Acts as an activator and inhibitor of sodium-coupled chloride cotransporters and potassium-coupled chloride cotransporters respectively. Activates SCNN1A, SCNN1B, SCNN1D, SGK1, TRPV5 and TRPV6. Regulates the activity of the thiazide-sensitive Na-Cl cotransporter, SLC12A3, by phosphorylation which appears to prevent membrane trafficking of SLC12A3. Also inhibits the renal K(+) channel, KCNJ1, via a kinase-independent mechanism by which it induces clearance of the protein from the cell surface by clathrin-dependent endocytosis. WNK4 appears to act as a molecular switch that can vary the balance between NaCl reabsorption and K(+) secretion to maintain integrated homeostasis. Phosphorylates NEDD4L.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q96J92|WNK4_HUMAN Serine/threonine-protein kinase WNK4 OS=Homo sapiens GN=WNK4 PE=1 SV=1

 Score =  144 bits (364), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 69/92 (75%), Positives = 75/92 (81%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           YLKF+ EIGRGSFKTVYRGLDT T V VAWCELQ +KL++AER RF EE EMLKGLQHPN
Sbjct: 173 YLKFDIEIGRGSFKTVYRGLDTDTTVEVAWCELQTRKLSRAERQRFSEEVEMLKGLQHPN 232

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY  W+  L  +  IVLVTELMTSGTLKT
Sbjct: 233 IVRFYDSWKSVLRGQVCIVLVTELMTSGTLKT 264

Serine/threonine kinase which plays an important role in the regulation of electrolyte homeostasis, cell signaling, survival and proliferation. Acts as an activator and inhibitor of sodium-coupled chloride cotransporters and potassium-coupled chloride cotransporters respectively. Activates SCNN1A, SCNN1B, SCNN1D, SGK1, TRPV5 and TRPV6. Regulates the activity of the thiazide-sensitive Na-Cl cotransporter, SLC12A3, by phosphorylation which appears to prevent membrane trafficking of SLC12A3. Also inhibits the renal K(+) channel, KCNJ1, via a kinase-independent mechanism by which it induces clearance of the protein from the cell surface by clathrin-dependent endocytosis. WNK4 appears to act as a molecular switch that can vary the balance between NaCl reabsorption and K(+) secretion to maintain integrated homeostasis. Phosphorylates NEDD4L.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9Y3S1|WNK2_HUMAN Serine/threonine-protein kinase WNK2 OS=Homo sapiens GN=WNK2 PE=1 SV=4

 Score =  142 bits (357), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 67/92 (72%), Positives = 79/92 (85%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           +LKF+ E+GRGSFKTVY+GLDT+T V VAWCELQ++KL K ER RF+EEAEMLKGLQHPN
Sbjct: 194 FLKFDIELGRGSFKTVYKGLDTETWVEVAWCELQDRKLTKLERQRFKEEAEMLKGLQHPN 253

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY +WE +   ++ IVLVTELMTSGTLKT
Sbjct: 254 IVRFYDFWESSAKGKRCIVLVTELMTSGTLKT 285

Serine/threonine kinase which plays an important role in the regulation of electrolyte homeostasis, cell signaling, survival, and proliferation. Acts as an activator and inhibitor of sodium-coupled chloride cotransporters and potassium-coupled chloride cotransporters respectively. Activates SLC12A2, SCNN1A, SCNN1B, SCNN1D and SGK1 and inhibits SLC12A5. Negatively regulates the EGF-induced activation of the ERK/MAPK-pathway and the downstream cell cycle progression. Affects MAPK3/MAPK1 activity by modulating the activity of MAP2K1 and this modulation depends on phosphorylation of MAP2K1 by PAK1. WNK2 acts by interfering with the activity of PAK1 by controlling the balance of the activity of upstream regulators of PAK1 activity, RHOA and RAC1, which display reciprocal activity.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q3UH66|WNK2_MOUSE Serine/threonine-protein kinase WNK2 OS=Mus musculus GN=Wnk2 PE=1 SV=2

 Score =  141 bits (356), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 67/92 (72%), Positives = 79/92 (85%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           +LKF+ E+GRGSFKTVY+GLDT+T V VAWCELQ++KL K ER RF+EEAEMLKGLQHPN
Sbjct: 194 FLKFDIELGRGSFKTVYKGLDTETWVEVAWCELQDRKLTKLERQRFKEEAEMLKGLQHPN 253

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY +WE +   ++ IVLVTELMTSGTLKT
Sbjct: 254 IVRFYDFWESSAKGKRCIVLVTELMTSGTLKT 285

Serine/threonine kinase which plays an important role in the regulation of electrolyte homeostasis, cell signaling, survival, and proliferation. Acts as an activator and inhibitor of sodium-coupled chloride cotransporters and potassium-coupled chloride cotransporters respectively. Activates SLC12A2, SCNN1A, SCNN1B, SCNN1D and SGK1 and inhibits SLC12A5. Negatively regulates the EGF-induced activation of the ERK/MAPK-pathway and the downstream cell cycle progression. Affects MAPK3/MAPK1 activity by modulating the activity of MAP2K1 and this modulation depends on phosphorylation of MAP2K1 by PAK1. WNK2 acts by interfering with the activity of PAK1 by controlling the balance of the activity of upstream regulators of PAK1 activity, RHOA and RAC1, which display reciprocal activity.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	199
242023604	2338	serine/threonine-protein kinase wnk 1,3,	0.572	0.048	0.762	9e-44
322786476	2932	hypothetical protein SINV_10612 [Solenop	0.331	0.022	0.934	3e-42
332023026	3005	Serine/threonine-protein kinase WNK1 [Ac	0.331	0.021	0.934	3e-42
307175299	3002	Serine/threonine-protein kinase WNK1 [Ca	0.331	0.021	0.934	4e-42
307197524	3012	Serine/threonine-protein kinase WNK3 [Ha	0.165	0.010	0.934	5e-42
328779065	3049	PREDICTED: hypothetical protein LOC72550	0.381	0.024	0.934	6e-42
383851743	3056	PREDICTED: uncharacterized protein LOC10	0.381	0.024	0.934	2e-41
350424024	3045	PREDICTED: hypothetical protein LOC10074	0.381	0.024	0.934	2e-41
345486479	3272	PREDICTED: hypothetical protein LOC10012	0.547	0.033	0.763	2e-40
193697605	1532	PREDICTED: hypothetical protein LOC10016	0.381	0.049	0.880	7e-40

>gi|242023604|ref|XP_002432222.1| serine/threonine-protein kinase wnk 1,3,4, putative [Pediculus humanus corporis] gi|212517619|gb|EEB19484.1| serine/threonine-protein kinase wnk 1,3,4, putative [Pediculus humanus corporis]

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 90/118 (76%), Positives = 96/118 (81%), Gaps = 4/118 (3%)

Query: 86  PQSFERVESPEVKEEERE---SMRG-YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQ 141
           P      E P+  +EE+    S  G +LKFEEEIGRGSFKTVYRGLDTQTGV+VAWCELQ
Sbjct: 402 PDKLLPSEGPQDDDEEKAIGVSPDGRFLKFEEEIGRGSFKTVYRGLDTQTGVSVAWCELQ 461

Query: 142 EKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           EKKLNK ER RFREEAEMLKGLQHPNIV F+ YWE T TKRKYIVLVTELMTSGTLKT
Sbjct: 462 EKKLNKTERIRFREEAEMLKGLQHPNIVRFFDYWEATPTKRKYIVLVTELMTSGTLKT 519

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322786476|gb|EFZ12925.1| hypothetical protein SINV_10612 [Solenopsis invicta]

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 86/92 (93%), Positives = 88/92 (95%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           +LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK ER RFREEAEMLKGLQHPN
Sbjct: 557 FLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKTERLRFREEAEMLKGLQHPN 616

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY YWEVTLT+RKYIVLVTELMTSGTLKT
Sbjct: 617 IVRFYDYWEVTLTRRKYIVLVTELMTSGTLKT 648

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332023026|gb|EGI63291.1| Serine/threonine-protein kinase WNK1 [Acromyrmex echinatior]

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 86/92 (93%), Positives = 88/92 (95%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           +LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK ER RFREEAEMLKGLQHPN
Sbjct: 614 FLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKTERLRFREEAEMLKGLQHPN 673

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY YWEVTLT+RKYIVLVTELMTSGTLKT
Sbjct: 674 IVRFYDYWEVTLTRRKYIVLVTELMTSGTLKT 705

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307175299|gb|EFN65329.1| Serine/threonine-protein kinase WNK1 [Camponotus floridanus]

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 86/92 (93%), Positives = 88/92 (95%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           +LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK ER RFREEAEMLKGLQHPN
Sbjct: 621 FLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKTERLRFREEAEMLKGLQHPN 680

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY YWEVTLT+RKYIVLVTELMTSGTLKT
Sbjct: 681 IVRFYDYWEVTLTRRKYIVLVTELMTSGTLKT 712

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307197524|gb|EFN78754.1| Serine/threonine-protein kinase WNK3 [Harpegnathos saltator]

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 86/92 (93%), Positives = 88/92 (95%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           +LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK ER RFREEAEMLKGLQHPN
Sbjct: 641 FLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKTERLRFREEAEMLKGLQHPN 700

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY YWEVTLT+RKYIVLVTELMTSGTLKT
Sbjct: 701 IVRFYDYWEVTLTRRKYIVLVTELMTSGTLKT 732

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328779065|ref|XP_001121340.2| PREDICTED: hypothetical protein LOC725503 [Apis mellifera]

 Score =  176 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 86/92 (93%), Positives = 88/92 (95%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           +LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK ER RFREEAEMLKGLQHPN
Sbjct: 632 FLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKTERLRFREEAEMLKGLQHPN 691

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY YWEVTLT+RKYIVLVTELMTSGTLKT
Sbjct: 692 IVRFYDYWEVTLTRRKYIVLVTELMTSGTLKT 723

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383851743|ref|XP_003701391.1| PREDICTED: uncharacterized protein LOC100882505 [Megachile rotundata]

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 86/92 (93%), Positives = 88/92 (95%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           +LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK ER RFREEAEMLKGLQHPN
Sbjct: 629 FLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKTERLRFREEAEMLKGLQHPN 688

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY YWEVTLT+RKYIVLVTELMTSGTLKT
Sbjct: 689 IVRFYDYWEVTLTRRKYIVLVTELMTSGTLKT 720

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350424024|ref|XP_003493665.1| PREDICTED: hypothetical protein LOC100747025 [Bombus impatiens]

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 86/92 (93%), Positives = 88/92 (95%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           +LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK ER RFREEAEMLKGLQHPN
Sbjct: 631 FLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKTERLRFREEAEMLKGLQHPN 690

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY YWEVTLT+RKYIVLVTELMTSGTLKT
Sbjct: 691 IVRFYDYWEVTLTRRKYIVLVTELMTSGTLKT 722

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345486479|ref|XP_001607687.2| PREDICTED: hypothetical protein LOC100123914 [Nasonia vitripennis]

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 87/114 (76%), Positives = 98/114 (85%), Gaps = 5/114 (4%)

Query: 91  RVESPEVKEEERESMRG-----YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL 145
           +V++ E  ++E +++       +LKFEEEIGRGSFKTVYRGLD+QTGVAVAWCELQEKKL
Sbjct: 616 KVQTVEDDDDEEKAVASSPDGRFLKFEEEIGRGSFKTVYRGLDSQTGVAVAWCELQEKKL 675

Query: 146 NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           NK ER RFREEAEMLKGLQHPNIV FY YWEVTL +RKYIVLVTELMTSGTLKT
Sbjct: 676 NKMERLRFREEAEMLKGLQHPNIVRFYDYWEVTLIRRKYIVLVTELMTSGTLKT 729

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193697605|ref|XP_001942786.1| PREDICTED: hypothetical protein LOC100160817 [Acyrthosiphon pisum]

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 81/92 (88%), Positives = 86/92 (93%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           +LKF+EE+G GSFKTV+RGLDTQTGVAVAWCELQE KL K ERARFREEAEMLKGLQHPN
Sbjct: 217 FLKFDEELGHGSFKTVFRGLDTQTGVAVAWCELQENKLTKTERARFREEAEMLKGLQHPN 276

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY YWEV+LTKRKYIVLVTELMTSGTLKT
Sbjct: 277 IVRFYDYWEVSLTKRKYIVLVTELMTSGTLKT 308

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	199
WB|WBGene00006941	1845	wnk-1 [Caenorhabditis elegans	0.457	0.049	0.720	7.6e-29
UNIPROTKB|F6UYG0	393	WNK1 "Serine/threonine-protein	0.462	0.234	0.673	3.9e-28
RGD|621141	2126	Wnk1 "WNK lysine deficient pro	0.462	0.043	0.673	2e-26
UNIPROTKB|F5GWT4	2134	WNK1 "Serine/threonine-protein	0.462	0.043	0.673	2e-26
UNIPROTKB|K7ENT7	469	WNK4 "Serine/threonine-protein	0.462	0.196	0.663	2.2e-26
UNIPROTKB|F1Q3Y6	2335	WNK1 "Uncharacterized protein"	0.462	0.039	0.673	2.2e-26
UNIPROTKB|F1SHS6	2376	WNK1 "Serine/threonine-protein	0.462	0.038	0.673	2.3e-26
UNIPROTKB|E1BN63	2377	WNK1 "Uncharacterized protein"	0.462	0.038	0.673	2.3e-26
MGI|MGI:2442092	2377	Wnk1 "WNK lysine deficient pro	0.462	0.038	0.673	2.3e-26
UNIPROTKB|Q9H4A3	2382	WNK1 "Serine/threonine-protein	0.462	0.038	0.673	2.3e-26

WB|WBGene00006941 wnk-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 336 (123.3 bits), Expect = 7.6e-29, P = 7.6e-29
 Identities = 67/93 (72%), Positives = 72/93 (77%)

Query:   108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
             +LKF+EE+GRGSFKTV+RGLDT+TGVAVAWCELQE KLNK           MLK LQHPN
Sbjct:   331 FLKFDEELGRGSFKTVFRGLDTETGVAVAWCELQESKLNKTERQRFREEAEMLKDLQHPN 390

Query:   168 IVSFYGYWEVT--LTKRKYIVLVTELMTSGTLK 198
             IV FY YWE      KRKYIVLVTELMTSGTLK
Sbjct:   391 IVRFYDYWESADLCGKRKYIVLVTELMTSGTLK 423

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0018991 "oviposition" evidence=IMP

UNIPROTKB|F6UYG0 WNK1 "Serine/threonine-protein kinase WNK1" [Homo sapiens (taxid:9606)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 62/92 (67%), Positives = 70/92 (76%)

Query:   108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
             +LKF+ EIGRGSFKTVY+GLDT+T V VAWCELQ++KL K           MLKGLQHPN
Sbjct:   220 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN 279

Query:   168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             IV FY  WE T+  +K IVLVTELMTSGTLKT
Sbjct:   280 IVRFYDSWESTVKGKKCIVLVTELMTSGTLKT 311

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

RGD|621141 Wnk1 "WNK lysine deficient protein kinase 1" [Rattus norvegicus (taxid:10116)]

 Score = 314 (115.6 bits), Expect = 2.0e-26, P = 2.0e-26
 Identities = 62/92 (67%), Positives = 70/92 (76%)

Query:   108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
             +LKF+ EIGRGSFKTVY+GLDT+T V VAWCELQ++KL K           MLKGLQHPN
Sbjct:   220 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN 279

Query:   168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             IV FY  WE T+  +K IVLVTELMTSGTLKT
Sbjct:   280 IVRFYDSWESTVKGKKCIVLVTELMTSGTLKT 311

GO:0000287 "magnesium ion binding" evidence=IMP

GO:0003084 "positive regulation of systemic arterial blood pressure" evidence=ISO

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=ISO;IDA

GO:0006811 "ion transport" evidence=ISO;ISS

GO:0007243 "intracellular protein kinase cascade" evidence=ISO;IDA

GO:0010923 "negative regulation of phosphatase activity" evidence=ISO;ISS

GO:0019870 "potassium channel inhibitor activity" evidence=IDA

GO:0019901 "protein kinase binding" evidence=IPI

GO:0019902 "phosphatase binding" evidence=ISO;ISS

GO:0030291 "protein serine/threonine kinase inhibitor activity" evidence=IDA

GO:0033673 "negative regulation of kinase activity" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0050794 "regulation of cellular process" evidence=ISO;ISS

GO:0071901 "negative regulation of protein serine/threonine kinase activity" evidence=IDA

GO:0090188 "negative regulation of pancreatic juice secretion" evidence=ISO

UNIPROTKB|F5GWT4 WNK1 "Serine/threonine-protein kinase WNK1" [Homo sapiens (taxid:9606)]

 Score = 314 (115.6 bits), Expect = 2.0e-26, P = 2.0e-26
 Identities = 62/92 (67%), Positives = 70/92 (76%)

Query:   108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
             +LKF+ EIGRGSFKTVY+GLDT+T V VAWCELQ++KL K           MLKGLQHPN
Sbjct:   220 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN 279

Query:   168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             IV FY  WE T+  +K IVLVTELMTSGTLKT
Sbjct:   280 IVRFYDSWESTVKGKKCIVLVTELMTSGTLKT 311

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|K7ENT7 WNK4 "Serine/threonine-protein kinase WNK4" [Homo sapiens (taxid:9606)]

 Score = 300 (110.7 bits), Expect = 2.2e-26, P = 2.2e-26
 Identities = 61/92 (66%), Positives = 67/92 (72%)

Query:   108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
             YLKF+ EIGRGSFKTVYRGLDT T V VAWCELQ +KL++           MLKGLQHPN
Sbjct:   173 YLKFDIEIGRGSFKTVYRGLDTDTTVEVAWCELQTRKLSRAERQRFSEEVEMLKGLQHPN 232

Query:   168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             IV FY  W+  L  +  IVLVTELMTSGTLKT
Sbjct:   233 IVRFYDSWKSVLRGQVCIVLVTELMTSGTLKT 264

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1Q3Y6 WNK1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 314 (115.6 bits), Expect = 2.2e-26, P = 2.2e-26
 Identities = 62/92 (67%), Positives = 70/92 (76%)

Query:   108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
             +LKF+ EIGRGSFKTVY+GLDT+T V VAWCELQ++KL K           MLKGLQHPN
Sbjct:   225 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN 284

Query:   168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             IV FY  WE T+  +K IVLVTELMTSGTLKT
Sbjct:   285 IVRFYDSWESTVKGKKCIVLVTELMTSGTLKT 316

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F1SHS6 WNK1 "Serine/threonine-protein kinase WNK1" [Sus scrofa (taxid:9823)]

 Score = 314 (115.6 bits), Expect = 2.3e-26, P = 2.3e-26
 Identities = 62/92 (67%), Positives = 70/92 (76%)

Query:   108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
             +LKF+ EIGRGSFKTVY+GLDT+T V VAWCELQ++KL K           MLKGLQHPN
Sbjct:   218 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN 277

Query:   168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             IV FY  WE T+  +K IVLVTELMTSGTLKT
Sbjct:   278 IVRFYDSWESTVKGKKCIVLVTELMTSGTLKT 309

GO:0090188 "negative regulation of pancreatic juice secretion" evidence=IEA

GO:0019902 "phosphatase binding" evidence=IEA

GO:0010923 "negative regulation of phosphatase activity" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0003084 "positive regulation of systemic arterial blood pressure" evidence=IEA

UNIPROTKB|E1BN63 WNK1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 314 (115.6 bits), Expect = 2.3e-26, P = 2.3e-26
 Identities = 62/92 (67%), Positives = 70/92 (76%)

Query:   108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
             +LKF+ EIGRGSFKTVY+GLDT+T V VAWCELQ++KL K           MLKGLQHPN
Sbjct:   225 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN 284

Query:   168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             IV FY  WE T+  +K IVLVTELMTSGTLKT
Sbjct:   285 IVRFYDSWESTVKGKKCIVLVTELMTSGTLKT 316

GO:0090188 "negative regulation of pancreatic juice secretion" evidence=IEA

GO:0019902 "phosphatase binding" evidence=IEA

GO:0010923 "negative regulation of phosphatase activity" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0003084 "positive regulation of systemic arterial blood pressure" evidence=IEA

MGI|MGI:2442092 Wnk1 "WNK lysine deficient protein kinase 1" [Mus musculus (taxid:10090)]

 Score = 314 (115.6 bits), Expect = 2.3e-26, P = 2.3e-26
 Identities = 62/92 (67%), Positives = 70/92 (76%)

Query:   108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
             +LKF+ EIGRGSFKTVY+GLDT+T V VAWCELQ++KL K           MLKGLQHPN
Sbjct:   220 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN 279

Query:   168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             IV FY  WE T+  +K IVLVTELMTSGTLKT
Sbjct:   280 IVRFYDSWESTVKGKKCIVLVTELMTSGTLKT 311

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=ISO

GO:0003084 "positive regulation of systemic arterial blood pressure" evidence=IMP

GO:0004672 "protein kinase activity" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0004860 "protein kinase inhibitor activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=ISO;IDA

GO:0006811 "ion transport" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=ISO

GO:0010923 "negative regulation of phosphatase activity" evidence=ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019870 "potassium channel inhibitor activity" evidence=ISO

GO:0019901 "protein kinase binding" evidence=ISO

GO:0019902 "phosphatase binding" evidence=ISO

GO:0030291 "protein serine/threonine kinase inhibitor activity" evidence=ISO

GO:0033673 "negative regulation of kinase activity" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=ISO

GO:0050794 "regulation of cellular process" evidence=IDA

GO:0071901 "negative regulation of protein serine/threonine kinase activity" evidence=ISO

GO:0090188 "negative regulation of pancreatic juice secretion" evidence=IMP

UNIPROTKB|Q9H4A3 WNK1 "Serine/threonine-protein kinase WNK1" [Homo sapiens (taxid:9606)]

 Score = 314 (115.6 bits), Expect = 2.3e-26, P = 2.3e-26
 Identities = 62/92 (67%), Positives = 70/92 (76%)

Query:   108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
             +LKF+ EIGRGSFKTVY+GLDT+T V VAWCELQ++KL K           MLKGLQHPN
Sbjct:   220 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN 279

Query:   168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             IV FY  WE T+  +K IVLVTELMTSGTLKT
Sbjct:   280 IVRFYDSWESTVKGKKCIVLVTELMTSGTLKT 311

GO:0004860 "protein kinase inhibitor activity" evidence=IEA

GO:0003084 "positive regulation of systemic arterial blood pressure" evidence=IEA

GO:0090188 "negative regulation of pancreatic juice secretion" evidence=IEA

GO:0006811 "ion transport" evidence=ISS

GO:0050794 "regulation of cellular process" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0048666 "neuron development" evidence=NAS

GO:0010923 "negative regulation of phosphatase activity" evidence=IDA

GO:0019902 "phosphatase binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	199
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	7e-18
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-17
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-17
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	6e-15
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	7e-15
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-14
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	7e-14
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-13
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-12
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-10
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	4e-10
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	6e-10
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-09
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-08
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-08
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	3e-08
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	3e-08
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	4e-08
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	8e-08
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	9e-08
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-07
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-07
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-07
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-07
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-07
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-07
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-07
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-07
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	3e-07
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-07
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	4e-07
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	4e-07
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	5e-07
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	7e-07
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-06
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	1e-06
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-06
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-06
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-06
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	4e-06
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	5e-06
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	5e-06
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	5e-06
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	6e-06
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	7e-06
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	8e-06
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	9e-06
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	9e-06
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-05
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-05
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-05
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-05
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	2e-05
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-05
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-05
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	3e-05
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-05
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	4e-05
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	5e-05
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	5e-05
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	7e-05
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	7e-05
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	7e-05
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	8e-05
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	8e-05
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	9e-05
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	1e-04
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-04
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-04
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	1e-04
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-04
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	2e-04
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-04
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-04
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	3e-04
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-04
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	3e-04
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	3e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-04
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-04
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	3e-04
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	4e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-04
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	4e-04
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	4e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	5e-04
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	5e-04
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	5e-04
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	5e-04
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	5e-04
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	6e-04
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	6e-04
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	6e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	7e-04
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	7e-04
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	8e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	8e-04
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	0.001
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	0.001
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	0.001
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	0.001
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	0.001
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	0.001
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	0.001
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	0.001
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	0.001
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	0.002
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	0.002
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	0.002
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	0.002
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	0.002
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	0.002
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	0.002
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	0.003
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	0.003
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	0.003
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	0.004
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.004
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	0.004
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	0.004
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	0.004
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 77.7 bits (192), Expect = 7e-18
 Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 5/85 (5%)

Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGY 174
           +G G F TVY   D +TG  VA   ++ K+ + +       E E+LK L HPNIV  YG 
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIK-KEDSSSLLEELLREIEILKKLNHPNIVKLYGV 59

Query: 175 WEVTLTKRKYIVLVTELMTSGTLKT 199
           +E       ++ LV E    G+LK 
Sbjct: 60  FE----DENHLYLVMEYCEGGSLKD 80

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 77.2 bits (191), Expect = 2e-17
 Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 21/101 (20%)

Query: 109 LKFEEEIGRGSFKTVYRGL------DTQTGVAVAWCELQEKKLN----KAERARFREEAE 158
           L+  +++G G+F  VY+G        T+T VAV       K L     + ER  F EEA 
Sbjct: 1   LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAV-------KTLKEGASEEEREEFLEEAS 53

Query: 159 MLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           ++K L HPNIV   G      T+ + + +VTE M  G L  
Sbjct: 54  IMKKLSHPNIVRLLGV----CTQGEPLYIVTEYMPGGDLLD 90

Length = 258

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 76.0 bits (188), Expect = 5e-17
 Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 13/94 (13%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE----RARFREEAEMLKGLQH 165
           +  E++G GSF  VY   D +TG  VA      K + K +    R R   E ++LK L+H
Sbjct: 2   EILEKLGEGSFGKVYLARDKKTGKLVAI-----KVIKKKKIKKDRERILREIKILKKLKH 56

Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           PNIV  Y  +E        + LV E    G L  
Sbjct: 57  PNIVRLYDVFE----DEDKLYLVMEYCEGGDLFD 86

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 70.6 bits (174), Expect = 6e-15
 Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 21/100 (21%)

Query: 109 LKFEEEIGRGSFKTVYRGL------DTQTGVAVAWCELQEKKLNK----AERARFREEAE 158
           L   +++G G+F  VY+G         +  VAV       K L +     +   F  EA 
Sbjct: 1   LTLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAV-------KTLKEDASEQQIEEFLREAR 53

Query: 159 MLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           +++ L HPN+V   G      T+ + + +V E M  G L 
Sbjct: 54  IMRKLDHPNVVKLLGV----CTEEEPLYIVMEYMEGGDLL 89

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 70.3 bits (173), Expect = 7e-15
 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 21/100 (21%)

Query: 109 LKFEEEIGRGSFKTVYRGL------DTQTGVAVAWCELQEKKLNK----AERARFREEAE 158
           L   +++G G+F  VY+G         +  VAV       K L +     +   F  EA 
Sbjct: 1   LTLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAV-------KTLKEDASEQQIEEFLREAR 53

Query: 159 MLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           +++ L HPNIV   G      T+ + +++V E M  G L 
Sbjct: 54  IMRKLDHPNIVKLLGV----CTEEEPLMIVMEYMPGGDLL 89

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 68.7 bits (169), Expect = 3e-14
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 2/85 (2%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFY 172
           E +GRGSF +VY  LD  TG  +A   ++    ++ E      E  +L  LQHPNIV +Y
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65

Query: 173 GYWEVTLTKRKYIVLVTELMTSGTL 197
           G  E    ++  + +  E ++ G+L
Sbjct: 66  GS-ERD-EEKNTLNIFLEYVSGGSL 88

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 67.7 bits (166), Expect = 7e-14
 Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFY 172
           + IGRG+F  VY+GL+ +TG  VA  ++  +K+ +       +E ++LK L+HPNIV + 
Sbjct: 6   DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYI 65

Query: 173 GYWEVTLTKRK-YIVLVTELMTSGTLKT 199
           G  E   T    YI+L  E   +G+L+ 
Sbjct: 66  GSIE---TSDSLYIIL--EYAENGSLRQ 88

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 66.5 bits (163), Expect = 2e-13
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 4/91 (4%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNI 168
            +   ++G GSF TVY+     TG  VA   L+++     +    R E  +L+ L HPNI
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           V     +E     + ++ LV E    G L  
Sbjct: 61  VRLIDAFE----DKDHLYLVMEYCEGGDLFD 87

Length = 260

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 63.3 bits (155), Expect = 3e-12
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 20/96 (20%)

Query: 113 EEIGRGSFKTVYRG-----LDTQTGVAVAWCELQEKKL----NKAERARFREEAEMLKGL 163
           +++G G+F  VY+G         T VAV       K L    ++ ER  F +EA ++K L
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAV-------KTLKEDASEEERKDFLKEARVMKKL 53

Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            HPN+V   G      T+ + + LV E M  G L  
Sbjct: 54  GHPNVVRLLGV----CTEEEPLYLVLEYMEGGDLLD 85

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 57.6 bits (140), Expect = 3e-10
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 7/90 (7%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
             K  E+IG G+   VY+  D  TG  VA   +++ +L K  +     E  ++K  +HPN
Sbjct: 20  LYKNLEKIGEGASGEVYKATDRATGKEVA---IKKMRLRKQNKELIINEILIMKDCKHPN 76

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           IV +Y  + V       + +V E M  G+L
Sbjct: 77  IVDYYDSYLV----GDELWVVMEYMDGGSL 102

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 57.1 bits (139), Expect = 4e-10
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFY 172
           ++IG+GSF  VY       G      E+    +++ ER     E ++LK L HPNI+ +Y
Sbjct: 6   KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYY 65

Query: 173 GYWEVTLTKRKYIVLVTELMTSGTL 197
             +E    ++  + +V E    G L
Sbjct: 66  ESFE----EKGKLCIVMEYADGGDL 86

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 56.7 bits (137), Expect = 6e-10
 Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 8/88 (9%)

Query: 113 EEIGRGSFKTVYRG-LDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSF 171
           E+IG+G+F  VY+G L   T VAV  C      L    + +F +EAE+LK   HPNIV  
Sbjct: 1   EKIGKGNFGDVYKGVLKGNTEVAVKTCRST---LPPDLKRKFLQEAEILKQYDHPNIVKL 57

Query: 172 YGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            G       +++ I +V EL+  G+L T
Sbjct: 58  IG----VCVQKQPIYIVMELVPGGSLLT 81

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 54.5 bits (132), Expect = 3e-09
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN---KAERARFREEAEMLKGLQ 164
             +  E+IG+G F  VY+    +TG  VA      K +    K ++ +   E ++LK  +
Sbjct: 1   LFEILEKIGKGGFGEVYKARHKRTGKEVAI-----KVIKLESKEKKEKIINEIQILKKCK 55

Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           HPNIV +YG +        +IV+  E  + G+LK
Sbjct: 56  HPNIVKYYGSYLK--KDELWIVM--EFCSGGSLK 85

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 2   QCNKSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC 54
           Q + +        TP +MAPE+   + YD   D+++ G+  +E++  + PY E 
Sbjct: 147 QLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSEL 200

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFY 172
           E IG+GSF TV +      G  + W E+    + + E+ +   E  +L+ L+HPNIV +Y
Sbjct: 6   ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYY 65

Query: 173 GYWEVTLTKRKYIVLVTELMTSGTL 197
               +  + +  + +V E    G L
Sbjct: 66  D-RIIDRSNQT-LYIVMEYCEGGDL 88

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 51.7 bits (124), Expect = 3e-08
 Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 8/91 (8%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNI 168
           L F +E+G G F  V+ G   +  + VA   ++E  +++ +   F EEA+++  L HPN+
Sbjct: 6   LTFLKELGSGQFGVVHLG-KWRGKIDVAIKMIREGAMSEDD---FIEEAKVMMKLSHPNL 61

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           V  YG      TK++ I +VTE M +G L  
Sbjct: 62  VQLYG----VCTKQRPIFIVTEYMANGCLLN 88

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 51.6 bits (124), Expect = 3e-08
 Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)

Query: 108 YLKFEEEIGRGSFKTVYRG---LDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ 164
           Y+  E+ IG G F  V RG   L  +  + VA   L+    +K +R  F  EA ++    
Sbjct: 5   YVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDK-QRLDFLTEASIMGQFD 63

Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           HPNI+   G     +TK + ++++TE M +G+L  
Sbjct: 64  HPNIIRLEG----VVTKSRPVMIITEYMENGSLDK 94

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 51.3 bits (124), Expect = 4e-08
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 13/89 (14%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE----RARFREEAEMLKGL 163
           Y K  E++G G++  VY+  D +TG  VA   L++ +L+  E        RE + +LK L
Sbjct: 1   YEK-LEKLGEGTYGVVYKARDKKTGEIVA---LKKIRLDNEEEGIPSTALREIS-LLKEL 55

Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELM 192
           +HPNIV      +V  T+RK + LV E  
Sbjct: 56  KHPNIVKLL---DVIHTERK-LYLVFEYC 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 50.9 bits (120), Expect = 8e-08
 Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 19/96 (19%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA------ERARFREEAEMLKGL 163
           +   ++G GSF  VY   D +  VA+       K L K       E  RF  E ++L  L
Sbjct: 3   RILRKLGEGSFGEVYLARDRKL-VAL-------KVLAKKLESKSKEVERFLREIQILASL 54

Query: 164 QHP-NIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
            HP NIV  Y +          + LV E +  G+L+
Sbjct: 55  NHPPNIVKLYDF----FQDEGSLYLVMEYVDGGSLE 86

Length = 384

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 50.4 bits (121), Expect = 9e-08
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)

Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGY 174
           IG G+F  VY  ++  TG  +A  E++ +  +        +E ++L+ L+HPN+V +YG 
Sbjct: 8   IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGV 67

Query: 175 WEVTLTKRKYIVLVTELMTSGTL 197
            EV    R+ + +  E  + GTL
Sbjct: 68  -EV---HREKVYIFMEYCSGGTL 86

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 50.1 bits (120), Expect = 1e-07
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 7/88 (7%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCE---LQEKKLNKAERARFREEAEMLKGLQHPNIV 169
           E +G GSF +VY GL+   G   A  E     + +  +    +  +E  +L  LQHPNIV
Sbjct: 6   ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIV 65

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTL 197
            + G          YI L  EL+  G+L
Sbjct: 66  QYLG--TEREEDNLYIFL--ELVPGGSL 89

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 50.2 bits (120), Expect = 1e-07
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 12/93 (12%)

Query: 113 EEIGRGSFKTVYRGLDTQTG--VAVAWCEL------QEKKLNKAERARFREEAEMLKGLQ 164
           E IG+G++  VY  L+  TG  +AV   EL      +     K      R E E LK L 
Sbjct: 7   ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD 66

Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           H NIV + G+ E T     Y+ +  E +  G++
Sbjct: 67  HLNIVQYLGF-ETTEE---YLSIFLEYVPGGSI 95

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 49.1 bits (118), Expect = 2e-07
 Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 1/53 (1%)

Query: 15  TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE+MAPE+   + Y ++VD+++ G+ + E+ T + P+       +++KK+  
Sbjct: 159 TPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGK 211

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 49.8 bits (119), Expect = 2e-07
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 10/94 (10%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQ-----TGVAVAWCELQEKKLNKAERARFREEAEMLKGL 163
           ++F EE+G G+F  VY+G  T      +  +VA   L+E       +  FR+EAE++  L
Sbjct: 7   VRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDL 65

Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           QHPNIV   G      TK +   ++ E +  G L
Sbjct: 66  QHPNIVCLLG----VCTKEQPTCMLFEYLAHGDL 95

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)

Query: 113 EEIGRGSFKTVYRGLDTQTG---VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
           +++G GSF  V RG  + +G   + VA   L+  KL+       +E A M   L H N++
Sbjct: 1   KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHS-LDHENLI 59

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTL 197
             YG   V LT    +++VTEL   G+L
Sbjct: 60  RLYG---VVLTHP--LMMVTELAPLGSL 82

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 7/95 (7%)

Query: 108 YLKFEEEIGRGSFKTVYRG----LDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL 163
           +LKF +++G G F  V       L   TG  VA   L      +  R+ F  E E+L+ L
Sbjct: 5   HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLN-HSGEEQHRSDFEREIEILRTL 63

Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
            H NIV + G  E      + + L+ E + SG+L+
Sbjct: 64  DHENIVKYKGVCEK--PGGRSLRLIMEYLPSGSLR 96

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 8/70 (11%)

Query: 110 KFE--EEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKAERARFREEAEMLKGLQH 165
            +E  + IG G++  VY+  D  TG  VA+   +L+       +    ++E  MLK  +H
Sbjct: 4   DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD----DFEIIQQEISMLKECRH 59

Query: 166 PNIVSFYGYW 175
           PNIV+++G +
Sbjct: 60  PNIVAYFGSY 69

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 49.8 bits (119), Expect = 2e-07
 Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 10/94 (10%)

Query: 109 LKFEEEIGRGSFKTVYRG-----LDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL 163
           +  + E+G G+F  V+ G             VA   L+E   N A +  F  EAE+L   
Sbjct: 7   IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARK-DFEREAELLTNF 65

Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           QH NIV FYG      T+    ++V E M  G L
Sbjct: 66  QHENIVKFYG----VCTEGDPPIMVFEYMEHGDL 95

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 49.1 bits (117), Expect = 3e-07
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 6/92 (6%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERAR--FREEAEMLKGLQH 165
            +K EE IG G F  V RG     G    +  ++  K    E+ R  F  EA ++    H
Sbjct: 5   CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 64

Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           PNI+   G     +TK + ++++TE M +G L
Sbjct: 65  PNIIHLEG----VVTKSRPVMIITEFMENGAL 92

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 48.0 bits (115), Expect = 4e-07
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 15  TPEFMAPEMYEE--HYDESVDVYAFGMCMLEMS 45
           TP +MAPE+     +Y E  D+++ G+ + E+ 
Sbjct: 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYELP 188

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 48.6 bits (116), Expect = 4e-07
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 10/93 (10%)

Query: 106 RGYLKFEEEIGRGSFKTVYRGL-DTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ 164
           R  ++   ++G G F  V+ GL +  T VAV     +  K    +   F  EA+++K L+
Sbjct: 5   RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAV-----KTLKPGTMDPKDFLAEAQIMKKLR 59

Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           HP ++  Y       T  + I +VTELM  G+L
Sbjct: 60  HPKLIQLYA----VCTLEEPIYIVTELMKYGSL 88

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 48.5 bits (115), Expect = 4e-07
 Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 8/84 (9%)

Query: 113 EEIGRGSFKTVYRG-LDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSF 171
           E +G+G+F  V++G L  +T VAV  C+   + L +  + +F  EA +LK   HPNIV  
Sbjct: 1   ELLGKGNFGEVFKGTLKDKTPVAVKTCK---EDLPQELKIKFLSEARILKQYDHPNIVKL 57

Query: 172 YGYWEVTLTKRKYIVLVTELMTSG 195
            G      T+R+ I +V EL+  G
Sbjct: 58  IG----VCTQRQPIYIVMELVPGG 77

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 48.4 bits (116), Expect = 5e-07
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)

Query: 110 KFE--EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHP 166
            FE  E IG G++  VY+    +TG  VA   ++   + + E    +EE  +L+    HP
Sbjct: 7   IFELVEVIGEGTYGKVYKARHKKTGQLVA---IKIMDIIEDEEEEIKEEYNILRKYSNHP 63

Query: 167 NIVSFYG--YWEVTLTKRKYIVLVTELMTSGT 196
           NI +FYG    +        + LV EL   G+
Sbjct: 64  NIATFYGAFIKKNPPGNDDQLWLVMELCGGGS 95

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 48.1 bits (115), Expect = 7e-07
 Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 6/67 (8%)

Query: 105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFR--EEAEMLKG 162
           +  Y K ++ +G GS+ TVY+G    TG  VA   L+E +L   E A F    EA +LK 
Sbjct: 4   LETYKKLDK-LGEGSYATVYKGRSKLTGQLVA---LKEIRLEHEEGAPFTAIREASLLKD 59

Query: 163 LQHPNIV 169
           L+H NIV
Sbjct: 60  LKHANIV 66

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 8/95 (8%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA----ERARFREEAEMLKGLQ 164
           +    E+G+GSF  VY GL            +  K +N+     ER  F  EA ++K   
Sbjct: 8   ITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFN 67

Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             ++V   G   V  T +  +V V ELM  G LK+
Sbjct: 68  CHHVVRLLG---VVSTGQPTLV-VMELMAKGDLKS 98

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 47.1 bits (112), Expect = 1e-06
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 9/82 (10%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFR--EEAEMLKGLQHPNIVS 170
           E++G G++ TVY+G +  TG  VA   L+E  L+  E        E  ++K L+H NIV 
Sbjct: 6   EKLGEGTYATVYKGRNRTTGEIVA---LKEIHLDAEEGTPSTAIREISLMKELKHENIVR 62

Query: 171 FYGYWEVTLTKRKYIVLVTELM 192
            +   +V  T+ K ++LV E M
Sbjct: 63  LH---DVIHTENK-LMLVFEYM 80

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 14/100 (14%)

Query: 99  EEERESMRGYLKFEEEIGRGSFKTVYRGL-DTQTGVAVAWCELQEKKLNKAERARFREEA 157
           E  RES    LK E ++G G F  V+ G  +  T VAV    L+   ++      F +EA
Sbjct: 2   EIPRES----LKLERKLGAGQFGEVWMGTWNGTTKVAVK--TLKPGTMSPEA---FLQEA 52

Query: 158 EMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           +++K L+H  +V  Y       ++ + I +VTE M+ G+L
Sbjct: 53  QIMKKLRHDKLVQLYA----VCSEEEPIYIVTEYMSKGSL 88

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 47.1 bits (112), Expect = 1e-06
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 12/76 (15%)

Query: 105 MRGYLKFEEEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKAERAR-----FREEA 157
           ++G L     IG GSF +VY G++  +G  +AV   EL     +  +R R        E 
Sbjct: 3   IKGAL-----IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREI 57

Query: 158 EMLKGLQHPNIVSFYG 173
            +LK LQH NIV + G
Sbjct: 58  ALLKELQHENIVQYLG 73

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 47.1 bits (112), Expect = 1e-06
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN---KAERARFREEAEMLKGLQHPNIVSF 171
           +G+G+F  VY   D  TG  +A  ++     +   K E      E ++LK LQH  IV +
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69

Query: 172 YGYWEVTLTKRKYIVLVTELMTSGTLK 198
           YG     L   + + +  E M  G++K
Sbjct: 70  YG----CLRDDETLSIFMEYMPGGSVK 92

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 45.8 bits (108), Expect = 4e-06
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 5/90 (5%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE-RARFREEAEMLKGLQHPN 167
            + E++IGRG F  VYR      GV VA  ++Q   L  A+ RA   +E ++LK L HPN
Sbjct: 4   FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 63

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           ++ +Y     +  +   + +V EL  +G L
Sbjct: 64  VIKYYA----SFIEDNELNIVLELADAGDL 89

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 45.5 bits (108), Expect = 5e-06
 Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 17/105 (16%)

Query: 100 EERESMRGYLKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKAERAR-FR 154
           EER     +LKF +++G+G+F +V    Y  L   TG  VA  +LQ    + AE  R F 
Sbjct: 2   EER-----HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQH---STAEHLRDFE 53

Query: 155 EEAEMLKGLQHPNIVSFYGYWEVTLTK-RKYIVLVTELMTSGTLK 198
            E E+LK LQH NIV + G   V  +  R+ + LV E +  G+L+
Sbjct: 54  REIEILKSLQHDNIVKYKG---VCYSAGRRNLRLVMEYLPYGSLR 95

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 45.3 bits (107), Expect = 5e-06
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 5/65 (7%)

Query: 113 EEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKAERA--RFREEAEMLKGLQHPNI 168
           E +G+G++ TVY GL T  G  +AV   EL    +  AE+   + +EE ++LK L+H NI
Sbjct: 6   EVLGKGAYGTVYCGL-TNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNI 64

Query: 169 VSFYG 173
           V + G
Sbjct: 65  VQYLG 69

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 45.4 bits (107), Expect = 5e-06
 Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 9/89 (10%)

Query: 113 EEIGRGSFKTVYRGL--DTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVS 170
           E IGRG+F  V+ G      T VAV  C    + L    +A+F +EA +LK   HPNIV 
Sbjct: 1   ERIGRGNFGEVFSGRLRADNTPVAVKSCR---ETLPPDLKAKFLQEARILKQYSHPNIVR 57

Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             G      T+++ I +V EL+  G   T
Sbjct: 58  LIG----VCTQKQPIYIVMELVQGGDFLT 82

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 45.0 bits (107), Expect = 6e-06
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFY 172
            +IG G++  VY+  D  TG  VA  +++ +  ++        E ++LK L HPNI+   
Sbjct: 5   GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLL 64

Query: 173 GYWEVTLTKRKYIVLVTELM 192
              +V   K   + LV E M
Sbjct: 65  ---DVFRHKGD-LYLVFEFM 80

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 45.1 bits (107), Expect = 7e-06
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 5/90 (5%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQE-KKLNKAERARFREEAEMLKGLQHPNI 168
           K E++IG+G F  VY+ +    G  VA  ++Q  + ++   R    +E ++LK L HPN+
Sbjct: 5   KIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNV 64

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           + +      +  +   + +V EL  +G L 
Sbjct: 65  IKYLA----SFIENNELNIVLELADAGDLS 90

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 44.9 bits (107), Expect = 8e-06
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 22/97 (22%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKAERARFRE--------EA 157
           Y K  +++G G++  VY+  D +TG  VA+       KK+   ER   ++        E 
Sbjct: 2   YEK-GKKLGEGTYAVVYKARDKETGRIVAI-------KKIKLGERKEAKDGINFTALREI 53

Query: 158 EMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTS 194
           ++L+ L+HPNI+            +  I LV E M +
Sbjct: 54  KLLQELKHPNIIGLLD----VFGHKSNINLVFEFMET 86

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 44.6 bits (106), Expect = 9e-06
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 15  TPEFMAPE--MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYK 62
           TP +MAPE  +    Y   VDV++ G+ + E+ T + P+       Q+  
Sbjct: 161 TPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQL 210

Length = 260

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 44.6 bits (105), Expect = 9e-06
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 8/89 (8%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNI 168
           L   +EIG G F  V+ G        VA   ++E  +++ +   F EEA+++  L HP +
Sbjct: 6   LTLVQEIGSGQFGLVWLGY-WLEKRKVAIKTIREGAMSEED---FIEEAQVMMKLSHPKL 61

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           V  YG      T+R  I LV E M  G L
Sbjct: 62  VQLYG----VCTERSPICLVFEFMEHGCL 86

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 44.1 bits (105), Expect = 1e-05
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
           TP +MAPE+   E Y  + D+++ G  ++EM+T + P+ E   P     K+
Sbjct: 166 TPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKI 216

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 13/88 (14%)

Query: 114 EIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFRE----EAEMLKGLQHPNIV 169
            +G+GS   VY+     TG   A      KK++      FR+    E + L+  + P +V
Sbjct: 8   VLGQGSSGVVYKVRHKPTGKIYAL-----KKIHVDGDEEFRKQLLRELKTLRSCESPYVV 62

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTL 197
             YG +     K   I +V E M  G+L
Sbjct: 63  KCYGAFY----KEGEISIVLEYMDGGSL 86

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 17/106 (16%)

Query: 96  EVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKAERA 151
            +KE E       L+  + +G G+F TVY+G+    G    + VA   L+E+   KA + 
Sbjct: 3   ILKETE-------LEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKE 55

Query: 152 RFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
              +EA ++  + HP++V   G   + L+ +  + L+T+LM  G L
Sbjct: 56  -ILDEAYVMASVDHPHVVRLLG---ICLSSQ--VQLITQLMPLGCL 95

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 19/50 (38%), Positives = 31/50 (62%)

Query: 16  PEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV 65
           PE + PE+ ++ YD   DV++ G+ M+E++T  +PY     P Q  K+VV
Sbjct: 172 PERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV 221

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 43.7 bits (103), Expect = 2e-05
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 14/92 (15%)

Query: 109 LKFEEEIGRGSFKTVYRG-LDTQTGVAVAWCELQEKKLNKAERAR--FREEAEMLKGLQH 165
           L F +E+G G F  V+ G    Q  VA+       K +N+   +   F EEA+++  L H
Sbjct: 6   LTFMKELGSGQFGVVHLGKWRAQIKVAI-------KAINEGAMSEEDFIEEAKVMMKLSH 58

Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           P +V  YG      T++K + +VTE M +G L
Sbjct: 59  PKLVQLYG----VCTQQKPLYIVTEFMENGCL 86

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 10/70 (14%)

Query: 110 KFEEEIGRGSFKTVYRGLD--TQTGVAVAWCE----LQEKKLNKAERARFREEAEMLKGL 163
           KF + IG GSF TV    +  T    A+   +    ++EKK+         E+  + +  
Sbjct: 4   KFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYV----KIEKEVLTRLN 59

Query: 164 QHPNIVSFYG 173
            HP I+  Y 
Sbjct: 60  GHPGIIKLYY 69

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 9/89 (10%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNI 168
           LK    IG+G F  V  G      VAV     +  K +      F  EA ++  L+HPN+
Sbjct: 8   LKLGATIGKGEFGDVMLGDYRGQKVAV-----KCLKDDSTAAQAFLAEASVMTTLRHPNL 62

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           V   G   V L     + +VTE M  G+L
Sbjct: 63  VQLLG---VVLQG-NPLYIVTEYMAKGSL 87

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 42.9 bits (101), Expect = 3e-05
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 11/96 (11%)

Query: 103 ESMRGYLKFEEEIGRGSFKTVYRGL-DTQTGVAVAWCELQEKKLNKAERARFREEAEMLK 161
           E  R  LK  +++G G F  V+ G  +  T VA+     +  K        F  EA ++K
Sbjct: 2   EVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAI-----KSLKQGSMSPEAFLAEANLMK 56

Query: 162 GLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
            LQHP +V  Y      +  ++ I ++TE M +G+L
Sbjct: 57  QLQHPRLVRLYA-----VVTQEPIYIITEYMENGSL 87

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 42.9 bits (101), Expect = 3e-05
 Identities = 14/38 (36%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
           TP +++PE+ E+  Y+E  DV+A G+ + E  T ++P+
Sbjct: 164 TPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPF 201

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)

Query: 15  TPEFMAPEMYEEH--YDESVDVYAFGMCMLEMSTSEYPY 51
           TP +MAPE+ E+   YD   D+++FG+  +E++T   PY
Sbjct: 169 TPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPY 207

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 42.4 bits (100), Expect = 5e-05
 Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 7/87 (8%)

Query: 112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSF 171
           E ++G G F  V+ GL  +  V VA   L+   L K +   F++E + LK L+H +++S 
Sbjct: 11  ERKLGSGYFGEVWEGL-WKNRVRVAIKILKSDDLLKQQD--FQKEVQALKRLRHKHLISL 67

Query: 172 YGYWEVTLTKRKYIVLVTELMTSGTLK 198
           +     ++ +  YI  +TELM  G+L 
Sbjct: 68  FAV--CSVGEPVYI--ITELMEKGSLL 90

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 42.7 bits (100), Expect = 5e-05
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 11/89 (12%)

Query: 114 EIGRGSFKTVYRG-----LDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNI 168
           E+G G+F  V+       L  Q  + VA   L+E   +++ R  F+ EAE+L  LQH +I
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTVLQHQHI 69

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           V FYG      T+ + +++V E M  G L
Sbjct: 70  VRFYG----VCTEGRPLLMVFEYMRHGDL 94

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFG-MCMLEMSTSEYPYME 53
           TP +MAPE+ +   Y   VD+++ G MC+ EM+  E PY+ 
Sbjct: 179 TPYWMAPEVIKRKDYGPKVDIWSLGIMCI-EMAEGEPPYLR 218

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 42.4 bits (100), Expect = 7e-05
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPY 51
           TPEF+APE + E  Y  +VD +  G+ + EM   E P+
Sbjct: 164 TPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPF 201

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 41.8 bits (98), Expect = 7e-05
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 8/85 (9%)

Query: 115 IGRGSFKTVY--RGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFY 172
           +GRG+F  V+  R    Q  V +   ++  +++ K ER   + E ++LK L HPNI+ +Y
Sbjct: 8   VGRGAFGIVHLCRRKADQKLVIIK--QIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYY 65

Query: 173 GYWEVTLTKRKYIVLVTELMTSGTL 197
                   + K +++V E    GTL
Sbjct: 66  E----NFLEDKALMIVMEYAPGGTL 86

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 41.8 bits (99), Expect = 8e-05
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC-IGPAQIYKKVV 65
           TPE++APE+   + YD SVD ++ G+ + E+ T   P+ E    P +IY  ++
Sbjct: 155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDIL 207

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 41.7 bits (99), Expect = 8e-05
 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 19/93 (20%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAER----AR--FREEAEMLKGL 163
           +  + IG G++  V   +D +TG  VA      KK++        A+   R E ++L+ L
Sbjct: 3   ELLKPIGSGAYGVVCSAVDKRTGRKVAI-----KKISNVFDDLIDAKRILR-EIKLLRHL 56

Query: 164 QHPNIVSFYGYWEVTLTKRKY----IVLVTELM 192
           +H NI+      ++           + +VTELM
Sbjct: 57  RHENIIGLL---DILRPPSPEDFNDVYIVTELM 86

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 41.6 bits (98), Expect = 9e-05
 Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 9/90 (10%)

Query: 110 KFEEEIGRGSFKTVYRG--LDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           +  E IG G+   VY    L     VA+   +L++ + +  E    R+E + +    HPN
Sbjct: 4   ELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDE---LRKEVQAMSQCNHPN 60

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           +V +Y     +      + LV   ++ G+L
Sbjct: 61  VVKYYT----SFVVGDELWLVMPYLSGGSL 86

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 109 LKFEEEIGRGSFKTVYRG---LDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQH 165
           +K E+ IG G F  V  G   L  +  + VA   L+     K +R  F  EA ++    H
Sbjct: 6   IKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEK-QRRDFLSEASIMGQFDH 64

Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           PNI+   G     +TK K +++VTE M +G+L  
Sbjct: 65  PNIIHLEG----VVTKSKPVMIVTEYMENGSLDA 94

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 10/90 (11%)

Query: 109 LKFEEEIGRGSFKTV-YRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           L F +E+G G F  V Y     Q  VA+    ++E  +++ E   F EEA+++  L H  
Sbjct: 6   LTFLKELGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDE---FIEEAKVMMKLSHEK 60

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           +V  YG      TK++ I +VTE M++G L
Sbjct: 61  LVQLYG----VCTKQRPIYIVTEYMSNGCL 86

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 4/64 (6%)

Query: 115 IGRGSF--KTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFY 172
           +G+G+F   T+YR   T+    V W E+   +L++ ER     E  +L  LQHPNI+++Y
Sbjct: 8   LGKGAFGEATLYR--RTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYY 65

Query: 173 GYWE 176
            ++ 
Sbjct: 66  NHFM 69

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 41.2 bits (96), Expect = 1e-04
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 10/85 (11%)

Query: 109 LKFEEEIGRGSFKTVYRG--LDTQTG---VAVAWCELQEKKLNKAERARFREEAEMLKGL 163
           ++F EE+G   F  VY+G    T  G    AVA   L++K      R  F+ EA M   L
Sbjct: 7   VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDK-AEGPLREEFKHEAMMRSRL 65

Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLV 188
           QHPNIV   G     +TK + + ++
Sbjct: 66  QHPNIVCLLG----VVTKEQPLSMI 86

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+     Y ++VD +A G+ + EM    YP      P QIY+K++ 
Sbjct: 161 TPEYLAPEIILSKGYGKAVDWWALGILIYEMLAG-YPPFFDDNPIQIYEKILE 212

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 7/89 (7%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
           K +E IG+GS+  V   +DT TG  VA  ++ +   + ++  R   E ++L+ L+HP+IV
Sbjct: 3   KIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIV 62

Query: 170 SFYGYWEVTL--TKRKY--IVLVTELMTS 194
                  + L  ++R++  I +V ELM S
Sbjct: 63  EIK---HIMLPPSRREFKDIYVVFELMES 88

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 11/96 (11%)

Query: 103 ESMRGYLKFEEEIGRGSFKTVYRGL-DTQTGVAVAWCELQEKKLNKAERARFREEAEMLK 161
           E  R  L+  +++G G F  V+ G  +  T VAV     +  K        F EEA+++K
Sbjct: 2   EIPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAV-----KTLKPGTMSPESFLEEAQIMK 56

Query: 162 GLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
            L+H  +V  Y      +   + I +VTE M+ G+L
Sbjct: 57  KLRHDKLVQLYA-----VVSEEPIYIVTEYMSKGSL 87

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 40.5 bits (93), Expect = 3e-04
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 7/57 (12%)

Query: 15  TPEFMAPE----MYEEHYDESVDVYAFGMCMLEMSTSEYPYM---ECIGPAQIYKKV 64
           TP +MAPE    +   +   S D+++ G+ + E+ T   P+         +Q  K +
Sbjct: 171 TPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKII 227

Length = 384

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 2/50 (4%)

Query: 15  TPEFMAPE--MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYK 62
           +P +MAPE    +  Y  + D+++ G  +LEM+T + P+ +  G A ++K
Sbjct: 164 SPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFK 213

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFY 172
            +IG+GSF  V++ +        A  ++   K+N+ ER    +EA +L  L    I+ +Y
Sbjct: 6   NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYY 65

Query: 173 GYWEVTLTKRKYIVLVTELMTSGTL 197
              E  L K K + +V E   +G L
Sbjct: 66  ---ESFLDKGK-LNIVMEYAENGDL 86

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 9/88 (10%)

Query: 115 IGRGSFKTVYRG-LDTQTGVAVAWCELQEKKLNKA----ERARFREEAEMLKGLQHPNIV 169
           +G G+F  VY G      G       +  K L K     E+  F +EA ++    HPNIV
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTL 197
              G     L + +YI++  ELM  G L
Sbjct: 63  KLLGV--CLLNEPQYIIM--ELMEGGDL 86

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 5/59 (8%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFR--EEAEMLKGLQHPNIV 169
           E++G GS+ TVY+G+    G  VA   L+   +   E   F    EA +LKGL+H NIV
Sbjct: 11  EKLGEGSYATVYKGISRINGQLVA---LKVISMKTEEGVPFTAIREASLLKGLKHANIV 66

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAER--ARFREEAEMLKGLQHPNIV 169
            E IG+GSF  VY+ +D +T   VA   ++   L +AE      ++E + L   + P I 
Sbjct: 6   LECIGKGSFGEVYKAIDKRTNQVVA---IKVIDLEEAEDEIEDIQQEIQFLSQCRSPYIT 62

Query: 170 SFYG 173
            +YG
Sbjct: 63  KYYG 66

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 8/91 (8%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERAR----FREEAEMLKGLQHPNI 168
           +++G G+F + Y+  D +TG  +A  ++   +   +E+       R+E  ++  L HP+I
Sbjct: 6   QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHI 65

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           +   G    T     + + V E M  G++  
Sbjct: 66  IRMLG---ATCEDSHFNLFV-EWMAGGSVSH 92

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 6/64 (9%)

Query: 111 FEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIV 169
             E++G GS+ +VY+ +  +TG  VA      K +  + +     +E  +LK    P IV
Sbjct: 7   ILEKLGEGSYGSVYKAIHKETGQVVAI-----KVVPVEEDLQEIIKEISILKQCDSPYIV 61

Query: 170 SFYG 173
            +YG
Sbjct: 62  KYYG 65

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 40.1 bits (93), Expect = 3e-04
 Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 5/59 (8%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFR--EEAEMLKGLQHPNIV 169
           E++G GS+ TVY+G     G  VA   L+  +L + E   F    EA +LKGL+H NIV
Sbjct: 11  EKLGEGSYATVYKGKSKVNGKLVA---LKVIRLQEEEGTPFTAIREASLLKGLKHANIV 66

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 39.5 bits (92), Expect = 4e-04
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPY 51
           T  FMAPE+   E Y  S DV++ G  ++EM+T++ P+
Sbjct: 171 TIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPW 208

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 39.8 bits (94), Expect = 4e-04
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 16/87 (18%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARF-----REEAEMLKGLQHP 166
            +IG G++  VY+  + +TG  VA      KK+  + E+  F     R E ++L+ L+HP
Sbjct: 5   AQIGEGTYGQVYKARNKKTGELVAL-----KKIRMENEKEGFPITAIR-EIKLLQKLRHP 58

Query: 167 NIVSFYGYWEVTLTK-RKYIVLVTELM 192
           NIV      E+  +K +  I +V E M
Sbjct: 59  NIVRLK---EIVTSKGKGSIYMVFEYM 82

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 39.6 bits (92), Expect = 4e-04
 Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 22/108 (20%)

Query: 103 ESMRGYLKFEEEIGRGSFKTVYRGL-------DTQTGVAVAWCELQEKKLNKA----ERA 151
           E  R  +    E+G+GSF  VY G        + +T VAV       K +N++    ER 
Sbjct: 2   EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAV-------KTVNESASLRERI 54

Query: 152 RFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            F  EA ++KG    ++V   G     ++K +  ++V ELM  G LK+
Sbjct: 55  EFLNEASVMKGFTCHHVVRLLG----VVSKGQPTLVVMELMAHGDLKS 98

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 12/75 (16%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL----NKAERARFREEAEMLKGLQ 164
           LK   EIGRG+F TV + L   +G  +A      K++    ++ E+ R   + +++    
Sbjct: 6   LKDLGEIGRGAFGTVNKMLHKPSGTIMA-----VKRIRSTVDEKEQKRLLMDLDVVMRSS 60

Query: 165 H-PNIVSFYG--YWE 176
             P IV FYG  + E
Sbjct: 61  DCPYIVKFYGALFRE 75

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 12/91 (13%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARF----REEAEMLKGLQH 165
           +   ++G G+F  VY+    +TG  VA     +K L   E+  F      E ++LK L+H
Sbjct: 11  EILGKLGEGTFGEVYKARQIKTGRVVAL----KKILMHNEKDGFPITALREIKILKKLKH 66

Query: 166 PNIVS----FYGYWEVTLTKRKYIVLVTELM 192
           PN+V          + +  KR  + +VT  M
Sbjct: 67  PNVVPLIDMAVERPDKSKRKRGSVYMVTPYM 97

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 39.6 bits (92), Expect = 5e-04
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 11/92 (11%)

Query: 111 FEEEIGRGSFKTV-----YRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQH 165
            + E+G G+F  V     Y    T+  + VA   L++  L  A R  F+ EAE+L  LQH
Sbjct: 9   LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL--AARKDFQREAELLTNLQH 66

Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
            +IV FYG           +++V E M  G L
Sbjct: 67  EHIVKFYG----VCGDGDPLIMVFEYMKHGDL 94

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPY 51
           TP+++APE +  + Y  +VD +A G+ + EM   + P+
Sbjct: 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPF 196

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 39.6 bits (92), Expect = 5e-04
 Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)

Query: 112 EEEIGRGSFKTVYRGLDTQTG---VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNI 168
           ++ IG G F  V+RG+    G   VAVA   L+     K +R  F  EA ++    H NI
Sbjct: 10  QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEK-QRQDFLSEASIMGQFSHHNI 68

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           +   G     +TK K  +++TE M +G L
Sbjct: 69  IRLEG----VVTKFKPAMIITEYMENGAL 93

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 39.1 bits (91), Expect = 5e-04
 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 9/67 (13%)

Query: 112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK------LNKAERARFREEAEMLKGLQH 165
           ++ +G+GSF TVY   D +   AVA   L+  K      LN  E  +  +EA++L  L H
Sbjct: 5   QQRLGKGSFGTVYLVKDKK---AVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDH 61

Query: 166 PNIVSFY 172
           P IV F+
Sbjct: 62  PAIVKFH 68

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 12/70 (17%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN----KAERARFREEAEMLKGLQH--- 165
           E IGRG++  VYRG    TG  VA      K +N      + +  + E  +L  L+    
Sbjct: 7   ELIGRGAYGAVYRGKHVPTGRVVAL-----KIINLDTPDDDVSDIQREVALLSQLRQSQP 61

Query: 166 PNIVSFYGYW 175
           PNI  +YG +
Sbjct: 62  PNITKYYGSY 71

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 39.2 bits (91), Expect = 6e-04
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 10/96 (10%)

Query: 103 ESMRGYLKFEEEIGRGSFKTVYRGL-DTQTGVAVAWCELQEKKLNKAERARFREEAEMLK 161
           E  R  +K  +++G G F  V+ G  +  T VAV     +  K        F EEA ++K
Sbjct: 2   EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAV-----KTLKPGTMSVQAFLEEANLMK 56

Query: 162 GLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
            LQH  +V  Y      +TK + I ++TE M  G+L
Sbjct: 57  TLQHDKLVRLYA----VVTKEEPIYIITEYMAKGSL 88

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 39.0 bits (92), Expect = 6e-04
 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
           TPE++APE+     Y ++VD ++ G+ + EM T + P+       +IY+K++   + 
Sbjct: 156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPF-YAEDRKEIYEKILKDPLR 211

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 39.1 bits (91), Expect = 7e-04
 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPY 51
           TP FMAPE+ + E YD SVD +A G+ + EM  +  P+
Sbjct: 160 TPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPF 197

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 39.1 bits (91), Expect = 7e-04
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)

Query: 103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKG 162
           E  R  +  + ++G G +  VY G+  +  + VA   L+E  +   E   F +EA ++K 
Sbjct: 2   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKE 58

Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           ++HPN+V   G      T+     ++TE MT G L
Sbjct: 59  IKHPNLVQLLG----VCTREPPFYIITEFMTYGNL 89

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 38.8 bits (91), Expect = 8e-04
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNI 168
           L++  E+G G+   V + L   TG  +A   ++  ++N+A + +   E ++L     P I
Sbjct: 3   LEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIR-LEINEAIQKQILRELDILHKCNSPYI 61

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           V FYG           I +  E M  G+L
Sbjct: 62  VGFYG----AFYNNGDISICMEYMDGGSL 86

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 38.7 bits (90), Expect = 8e-04
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYG 173
           +G+G++  VY   D  T V +A  E+ E+  +        EE  +   L+H NIV + G
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIPER--DSRYVQPLHEEIALHSYLKHRNIVQYLG 72

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 38.5 bits (90), Expect = 0.001
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 4/44 (9%)

Query: 15  TPEFMAPEMY----EEHYDESVDVYAFGMCMLEMSTSEYPYMEC 54
           TP +MAPE+      + +  + D+++ G  +LEM+T + P+ E 
Sbjct: 166 TPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSEL 209

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 5/66 (7%)

Query: 6   SYVNIRTQRTPEFMAPEMYE-----EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
           S    R+     +MAPE  +       YD   DV++ G+ ++E++T ++PY  C    ++
Sbjct: 168 SKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEV 227

Query: 61  YKKVVS 66
             K++ 
Sbjct: 228 LTKILQ 233

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 9/92 (9%)

Query: 109 LKFEEEIGRGSFKTVYRG---LDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQH 165
            + E++IGRG F  VYR    LD +  VA+   ++ E    KA R    +E ++LK L H
Sbjct: 4   FQIEKKIGRGQFSEVYRATCLLDRKP-VALKKVQIFEMMDAKA-RQDCVKEIDLLKQLNH 61

Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           PN++ +      +  +   + +V EL  +G L
Sbjct: 62  PNVIKYLD----SFIEDNELNIVLELADAGDL 89

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 38.5 bits (90), Expect = 0.001
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERAR-FREEAEMLKGLQHPNIVSFYG 173
           IG+G+F  V       T    A   + ++K  +    R    E  +L+ L HP +V+ + 
Sbjct: 8   IGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLW- 66

Query: 174 YWEVTLTKRKYIVLVTELMTSGTLK 198
               +    + + LV +L+  G L+
Sbjct: 67  ---YSFQDEENMYLVVDLLLGGDLR 88

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 11/97 (11%)

Query: 106 RGYLKFEEEIGRGSFKTV-----YRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEML 160
           R  +  + E+G G+F  V     Y     Q  + VA   L++   N   R  F  EAE+L
Sbjct: 4   RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNA--RKDFHREAELL 61

Query: 161 KGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
             LQH +IV FYG       +   +++V E M  G L
Sbjct: 62  TNLQHEHIVKFYG----VCVEGDPLIMVFEYMKHGDL 94

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 11/67 (16%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAER----ARFREEAEMLKGLQ---H 165
            EIG G++ TVY+  D  TG  VA   L++ ++  +E     +  RE A +LK L+   H
Sbjct: 5   AEIGEGAYGTVYKARDLNTGRFVA---LKKVRVPLSEEGIPLSTLREIA-LLKQLESFEH 60

Query: 166 PNIVSFY 172
           PNIV   
Sbjct: 61  PNIVRLL 67

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 15/41 (36%), Positives = 28/41 (68%), Gaps = 1/41 (2%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC 54
           TP+++APE+ + + Y+ESVD ++FG+ + EM   + P+   
Sbjct: 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGE 199

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 15/96 (15%)

Query: 109 LKFEEEIGRGSFKTVYRG------LDTQTGVAVAWCELQEKKLNKAER-ARFREEAEMLK 161
           ++F EE+G  +F  +Y+G      +D    VA+       K +N  ++   F++EA ++ 
Sbjct: 7   VRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIK----TLKDINNPQQWGEFQQEASLMA 62

Query: 162 GLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
            L HPNIV   G     +T+ + + ++ E +  G L
Sbjct: 63  ELHHPNIVCLLG----VVTQEQPVCMLFEYLNQGDL 94

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 38.0 bits (88), Expect = 0.001
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 9/89 (10%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNI 168
           LK  + IG+G F  V  G      VAV   +      N A    F  EA ++  L+H N+
Sbjct: 8   LKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK------NDATAQAFLAEASVMTQLRHSNL 61

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           V   G   V + ++  + +VTE M  G+L
Sbjct: 62  VQLLG---VIVEEKGGLYIVTEYMAKGSL 87

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)

Query: 15  TPEFMAPEMYEE--HYDESVDVYAFGMCMLEMSTSEYPY 51
           TP +MAPE+  E  +YD   D+++ G+ + EM+T   PY
Sbjct: 164 TPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPY 202

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPEMYEE-HYDESVDVYAFGMCMLEMSTSEYPY 51
           TP+++APE+ +E  Y  SVD +A G+ M EM   + P+
Sbjct: 159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 37.7 bits (88), Expect = 0.002
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 9/88 (10%)

Query: 113 EEIGRGSFKTVYRGLDTQTG---VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
           +E+G G+F +V +G+        V VA   L+++    A +  F  EA ++  L HP IV
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEH-IAAGKKEFLREASVMAQLDHPCIV 59

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTL 197
              G     + K + ++LV EL   G L
Sbjct: 60  RLIG-----VCKGEPLMLVMELAPLGPL 82

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 10/66 (15%)

Query: 115 IGRGSFKTVYRGL-------DTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           +GRG F  V+            +T V V    LQ+ K    +   FR E +M + L H N
Sbjct: 13  LGRGEFGEVFLAKAKGIEEEGGETLVLVK--ALQKTKDENLQSE-FRRELDMFRKLSHKN 69

Query: 168 IVSFYG 173
           +V   G
Sbjct: 70  VVRLLG 75

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 22/71 (30%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAE-----------MLK 161
           E+IG G++ TV++  + +T   VA            +R R  ++ E           +LK
Sbjct: 6   EKIGEGTYGTVFKAKNRETHEIVA-----------LKRVRLDDDDEGVPSSALREICLLK 54

Query: 162 GLQHPNIVSFY 172
            L+H NIV  Y
Sbjct: 55  ELKHKNIVRLY 65

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 7/66 (10%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAER---ARFREEAEMLKGLQ 164
           Y K E+ IG G++  VY+G + +TG  VA   +++ +L   E    +    E  +LK LQ
Sbjct: 2   YTKIEK-IGEGTYGVVYKGRNKKTGQIVA---MKKIRLESEEEGVPSTAIREISLLKELQ 57

Query: 165 HPNIVS 170
           HPNIV 
Sbjct: 58  HPNIVC 63

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 37.5 bits (87), Expect = 0.002
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 4/41 (9%)

Query: 15  TPEFMAPE----MYEEHYDESVDVYAFGMCMLEMSTSEYPY 51
           TP +MAPE    M E  YD  VDV++ G+  +E++  + P 
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 37.3 bits (87), Expect = 0.003
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPY 51
           TP +MAPE+   + Y  +VD ++ G+   E    + PY
Sbjct: 162 TPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPY 199

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 37.3 bits (87), Expect = 0.003
 Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 22/71 (30%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAE-----------MLK 161
           E+IG G++  VY+  D  TG  VA      KK+      R   E E           +LK
Sbjct: 5   EKIGEGTYGVVYKARDKLTGEIVAL-----KKI------RLETEDEGVPSTAIREISLLK 53

Query: 162 GLQHPNIVSFY 172
            L HPNIV   
Sbjct: 54  ELNHPNIVRLL 64

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 37.0 bits (85), Expect = 0.003
 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 10/93 (10%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKAERARFREEAEMLKGLQ 164
           LK  + +G G+F TVY+G+    G    + VA   L E    KA    F +EA ++  + 
Sbjct: 9   LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN-VEFMDEALIMASMD 67

Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           HP++V   G   V L+    I LVT+LM  G L
Sbjct: 68  HPHLVRLLG---VCLSPT--IQLVTQLMPHGCL 95

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 16/68 (23%)

Query: 115 IGRGSFKTVYRG--LDT---QTGVAVAWCELQEKKLNK----AERARFREEAEMLKGLQH 165
           IG+G F  VY G  +D+   +   AV       K LN+     E  +F +E  ++K   H
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHCAV-------KSLNRITDLEEVEQFLKEGIIMKDFSH 55

Query: 166 PNIVSFYG 173
           PN++S  G
Sbjct: 56  PNVLSLLG 63

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 37.0 bits (86), Expect = 0.004
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 13/98 (13%)

Query: 106 RGYLKFEEEIGRGSFKTVYRGL-----DTQTGVAVAWCELQEKKLNKAERARFREEAEML 160
           R  +     IG G F  VY+G+     + +  VAV  C+      + + R +F +EA ++
Sbjct: 5   REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCK---NCTSPSVREKFLQEAYIM 61

Query: 161 KGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           +   HP+IV   G          +IV+  EL   G L+
Sbjct: 62  RQFDHPHIVKLIGVITENPV---WIVM--ELAPLGELR 94

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 11/96 (11%)

Query: 103 ESMRGYLKFEEEIGRGSFKTVYRG-LDTQTGVAVAWCELQEKKLNKAERARFREEAEMLK 161
           E  R  LK E+++G G F  V+    +  T VAV     +  K        F  EA ++K
Sbjct: 2   EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAV-----KTMKPGSMSVEAFLAEANVMK 56

Query: 162 GLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
            LQH  +V  +      +  ++ I ++TE M  G+L
Sbjct: 57  TLQHDKLVKLHA-----VVTKEPIYIITEFMAKGSL 87

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 5/87 (5%)

Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQ---EKKLNKAERARFREEAEMLKGLQHPNIVSF 171
           +G+G+F  VY   D  TG  +A  ++Q   E      E      E ++LK L H  IV +
Sbjct: 10  LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQY 69

Query: 172 YGYWEVTLTKRKYIVLVTELMTSGTLK 198
           YG     + +   I +  E M  G++K
Sbjct: 70  YGCLRDPMERTLSIFM--EHMPGGSIK 94

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 36.8 bits (85), Expect = 0.004
 Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 11/92 (11%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFRE---EAEMLKGLQH 165
           ++  +E+G+G++ +VY+ L   TGV +A   ++E +L + + ++F +   E ++L     
Sbjct: 3   IEVLDELGKGNYGSVYKVLHRPTGVTMA---MKEIRL-ELDESKFNQIIMELDILHKAVS 58

Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           P IV FYG           + +  E M +G+L
Sbjct: 59  PYIVDFYG----AFFIEGAVYMCMEYMDAGSL 86

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 36.7 bits (85), Expect = 0.004
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFY 172
           E+IG G++  VY+  +  TG  VA  +++     +   +    E  +LK L HPNIV   
Sbjct: 6   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 65

Query: 173 GYWEVTLTKRKYIVLVTELM 192
              +V  T+ K + LV E +
Sbjct: 66  ---DVIHTENK-LYLVFEFL 81

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	199
KOG0595|consensus	429		99.86
KOG0615|consensus	475		99.76
KOG1187|consensus	361		99.75
KOG0194|consensus	474		99.73
KOG0197|consensus	468		99.73
KOG0575|consensus	592		99.72
KOG0603|consensus	612		99.72
KOG0591|consensus	375		99.69
KOG1026|consensus	774		99.67
KOG0581|consensus	364		99.66
KOG0192|consensus	362		99.66
KOG0593|consensus	396		99.66
KOG0600|consensus	560		99.66
KOG0580|consensus	281		99.65
KOG0598|consensus	357		99.64
KOG0605|consensus	550		99.63
KOG0032|consensus	382		99.62
KOG0597|consensus	808		99.61
KOG0610|consensus	459		99.61
KOG1094|consensus	807		99.6
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.6
KOG0598|consensus	357		99.59
KOG0611|consensus	668		99.59
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.59
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.58
KOG0659|consensus	318		99.58
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.58
KOG1095|consensus	1025		99.58
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.57
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.57
KOG0616|consensus	355		99.57
KOG0586|consensus	596		99.57
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.57
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.57
KOG0585|consensus	576		99.56
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.56
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.56
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.56
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.56
KOG0583|consensus	370		99.55
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.55
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.55
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.55
KOG0616|consensus	355		99.55
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.54
KOG0694|consensus	694		99.54
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.54
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.53
KOG4278|consensus	1157		99.53
KOG0694|consensus	694		99.53
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.53
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.53
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.53
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.53
KOG0196|consensus	996		99.53
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.52
KOG4250|consensus	732		99.52
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.52
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.52
KOG0589|consensus	426		99.52
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.52
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.51
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.51
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.51
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.51
KOG0582|consensus	516		99.5
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.5
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.5
KOG0033|consensus	355		99.5
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.5
KOG0663|consensus	419		99.5
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.49
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.49
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.49
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.49
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.49
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.49
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.48
KOG0610|consensus	459		99.48
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.48
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.48
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.48
KOG0605|consensus	550		99.48
KOG0588|consensus	786		99.48
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.48
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.47
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.47
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.46
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.46
KOG0198|consensus	313		99.45
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.45
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.45
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.45
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.45
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.45
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.45
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.45
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.45
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.44
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.44
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.44
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.44
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.44
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.44
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.44
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.44
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.44
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.44
KOG0201|consensus	467		99.43
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.43
PTZ00267	478	NIMA-related protein kinase; Provisional	99.43
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.43
KOG0592|consensus	604		99.43
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.43
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.42
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.42
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.42
KOG4721|consensus	904		99.42
KOG0584|consensus	632		99.42
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.42
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.42
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.42
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.42
KOG4257|consensus	974		99.42
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.42
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.42
PHA02988	283	hypothetical protein; Provisional	99.42
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.42
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.42
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.42
KOG0578|consensus	550		99.42
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.41
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.41
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.41
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.41
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.41
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.41
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.41
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.41
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.41
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.41
PRK09188	365	serine/threonine protein kinase; Provisional	99.41
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.41
KOG0595|consensus	429		99.41
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.41
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.41
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.41
PTZ00283	496	serine/threonine protein kinase; Provisional	99.4
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.4
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.4
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.4
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.4
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.4
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.4
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.4
KOG0192|consensus	362		99.4
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.4
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.4
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.4
KOG0696|consensus	683		99.4
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.4
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.4
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.4
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.4
KOG0658|consensus	364		99.4
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.39
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.39
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.39
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.39
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.39
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.39
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.39
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.39
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.39
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.39
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.39
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.39
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.39
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.39
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.39
KOG0661|consensus	538		99.39
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.39
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.39
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.39
KOG0199|consensus	1039		99.39
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.39
KOG0574|consensus	502		99.39
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.39
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.38
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.38
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.38
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.38
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.38
KOG0575|consensus	592		99.38
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.38
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.38
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.38
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.38
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.38
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.38
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.37
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.37
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.37
KOG1989|consensus	738		99.37
KOG0615|consensus	475		99.37
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.37
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.37
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.37
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.37
KOG0193|consensus	678		99.37
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.36
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.36
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.36
KOG0578|consensus	550		99.36
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.36
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.36
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.36
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.36
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.36
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.35
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.35
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.35
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.35
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.35
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.35
KOG0662|consensus	292		99.35
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.35
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.35
KOG0591|consensus	375		99.35
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.35
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.35
KOG0690|consensus	516		99.34
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.34
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.34
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.34
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.34
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.34
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.34
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.34
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.34
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.34
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.34
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.34
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.34
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.34
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.34
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.34
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.33
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.33
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.33
KOG0584|consensus	632		99.33
KOG0690|consensus	516		99.33
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.33
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.33
PLN00009	294	cyclin-dependent kinase A; Provisional	99.33
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.33
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.33
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.33
KOG1035|consensus	1351		99.33
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.32
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.32
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.32
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.32
PHA03212	391	serine/threonine kinase US3; Provisional	99.32
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.32
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.32
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.32
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.32
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.32
KOG0597|consensus	808		99.31
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.31
KOG4236|consensus	888		99.31
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.31
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.31
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.31
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.31
KOG0660|consensus	359		99.31
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.3
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.3
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.3
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.3
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.3
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.3
KOG0614|consensus	732		99.3
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.3
KOG0577|consensus	948		99.3
KOG0201|consensus	467		99.29
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.29
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.29
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.29
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.29
KOG0579|consensus	1187		99.29
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.29
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.28
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.28
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.28
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.28
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.28
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.28
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.28
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.28
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.28
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.28
KOG1151|consensus	775		99.28
PTZ00036	440	glycogen synthase kinase; Provisional	99.28
KOG0612|consensus	1317		99.27
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.27
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.27
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.27
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.27
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.27
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.27
KOG0583|consensus	370		99.27
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.27
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.27
KOG0594|consensus	323		99.27
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.27
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.27
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.27
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.26
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.26
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.26
KOG0033|consensus	355		99.26
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.26
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.26
KOG0581|consensus	364		99.26
KOG0576|consensus	829		99.25
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.25
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.25
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.25
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.24
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.24
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.24
KOG4717|consensus	864		99.24
KOG0607|consensus	463		99.23
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.23
KOG0588|consensus	786		99.23
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.23
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.23
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.23
KOG1025|consensus	1177		99.23
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.23
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.23
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.23
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.22
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.22
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.22
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.22
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.22
KOG0695|consensus	593		99.22
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.21
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.21
PHA03209	357	serine/threonine kinase US3; Provisional	99.21
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.21
KOG4279|consensus	1226		99.2
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.2
KOG0587|consensus	953		99.2
KOG0582|consensus	516		99.2
PHA03211	461	serine/threonine kinase US3; Provisional	99.19
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.19
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.19
PHA02988	283	hypothetical protein; Provisional	99.19
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.18
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.18
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.18
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.18
KOG1187|consensus	361		99.18
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.17
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.17
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.17
KOG0986|consensus	591		99.17
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.17
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.17
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.17
KOG2052|consensus	513		99.16
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.16
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.16
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.16
KOG0596|consensus	677		99.16
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.16
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.15
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.14
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.14
KOG0592|consensus	604		99.14
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.14
KOG0986|consensus	591		99.14
PTZ00284	467	protein kinase; Provisional	99.14
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.14
KOG0200|consensus	609		99.13
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.13
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.13
KOG4645|consensus	1509		99.13
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.13
KOG0612|consensus	1317		99.12
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.12
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.12
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.12
KOG2345|consensus	302		99.11
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.11
KOG0667|consensus	586		99.1
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.1
KOG0983|consensus	391		99.1
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.1
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.1
KOG0197|consensus	468		99.1
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.1
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.09
KOG0032|consensus	382		99.09
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.09
KOG0984|consensus	282		99.09
KOG0696|consensus	683		99.09
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.09
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.09
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.08
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.08
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.08
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.08
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.08
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.08
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.08
KOG4721|consensus	904		99.08
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.08
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.08
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.07
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.07
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.07
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.07
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.07
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.07
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.07
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.06
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.06
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.06
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.06
KOG0580|consensus	281		99.05
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.05
KOG1152|consensus	772		99.05
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.05
KOG1095|consensus	1025		99.05
KOG0599|consensus	411		99.04
PHA03207	392	serine/threonine kinase US3; Provisional	99.04
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.04
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.04
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.04
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.04
KOG1026|consensus	774		99.04
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.03
KOG0577|consensus	948		99.03
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.03
KOG3653|consensus	534		99.03
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.03
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.02
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.02
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.02
PTZ00284	467	protein kinase; Provisional	99.02
KOG0666|consensus	438		99.02
PHA03210	501	serine/threonine kinase US3; Provisional	99.01
PRK10345	210	hypothetical protein; Provisional	99.01
KOG0198|consensus	313		99.01
PTZ00036	440	glycogen synthase kinase; Provisional	99.0
KOG1006|consensus	361		99.0
PTZ00283	496	serine/threonine protein kinase; Provisional	99.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.0
KOG4717|consensus	864		99.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.99
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.99
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.99
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	98.98
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.98
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.98
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.98
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	98.97
PTZ00267	478	NIMA-related protein kinase; Provisional	98.97
KOG1006|consensus	361		98.97
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	98.97
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.96
KOG0589|consensus	426		98.96
PHA02882	294	putative serine/threonine kinase; Provisional	98.96
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.95
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.95
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.95
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.95
KOG4250|consensus	732		98.94
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	98.94
KOG0596|consensus	677		98.94
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	98.93
KOG0200|consensus	609		98.93
KOG0695|consensus	593		98.92
KOG4279|consensus	1226		98.92
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.92
KOG0576|consensus	829		98.92
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.92
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.92
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.91
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.91
KOG0193|consensus	678		98.91
KOG0599|consensus	411		98.91
PHA03207	392	serine/threonine kinase US3; Provisional	98.91

>KOG0595|consensus

Probab=99.86  E-value=2e-21  Score=147.03  Aligned_cols=89  Identities=38%  Similarity=0.568  Sum_probs=82.9

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ...|.+.+.||+|+||.||+|+++.++..||||++..+.+..+.++.+..|+.+|+.++|||||+|++++.    .++.+
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~----~~~~i   84 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIE----DDDFI   84 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEe----cCCeE
Confidence            35678888899999999999999999999999999988888888999999999999999999999999988    78999


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |||||||+||+|.
T Consensus        85 ~lVMEyC~gGDLs   97 (429)
T KOG0595|consen   85 YLVMEYCNGGDLS   97 (429)
T ss_pred             EEEEEeCCCCCHH
Confidence            9999999999984

>KOG0615|consensus

Probab=99.76  E-value=9.9e-19  Score=132.80  Aligned_cols=92  Identities=28%  Similarity=0.436  Sum_probs=79.2

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-----HHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-----ERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      ...+.|.+.+.||+|+||.|.+|..+.+++.||+|.+.++.....     ......+|+++|++|+|||||+++++|.  
T Consensus       169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~--  246 (475)
T KOG0615|consen  169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFE--  246 (475)
T ss_pred             hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeee--
Confidence            456788899999999999999999999999999999976543321     1233579999999999999999999998  


Q ss_pred             ecCCceEEEEEeccCCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLKT  199 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~~  199 (199)
                        ..+..|||||||+||+|.+
T Consensus       247 --~~ds~YmVlE~v~GGeLfd  265 (475)
T KOG0615|consen  247 --VPDSSYMVLEYVEGGELFD  265 (475)
T ss_pred             --cCCceEEEEEEecCccHHH
Confidence              7888899999999999864

>KOG1187|consensus

Probab=99.75  E-value=5e-18  Score=131.97  Aligned_cols=98  Identities=30%  Similarity=0.436  Sum_probs=82.0

Q ss_pred             ccchhhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeee
Q psy360           95 PEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGY  174 (199)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~  174 (199)
                      ..+...+...++++|.....||+|+||.||+|...+. ..+|||.+.......  ...|.+|+.++.+++|||+|+|+||
T Consensus        63 ~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGy  139 (361)
T KOG1187|consen   63 RSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGY  139 (361)
T ss_pred             ceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEE
Confidence            3467777888889999999999999999999986554 889999876443221  3449999999999999999999999


Q ss_pred             eeeeecCCc-eEEEEEeccCCCCCCC
Q psy360          175 WEVTLTKRK-YIVLVTELMTSGTLKT  199 (199)
Q Consensus       175 ~~~~~~~~~-~~~lv~E~~~~G~L~~  199 (199)
                      |.    +.+ ..+||+|||++|+|++
T Consensus       140 C~----e~~~~~~LVYEym~nGsL~d  161 (361)
T KOG1187|consen  140 CL----EGGEHRLLVYEYMPNGSLED  161 (361)
T ss_pred             Ee----cCCceEEEEEEccCCCCHHH
Confidence            98    666 5999999999999963

>KOG0194|consensus

Probab=99.73  E-value=7.3e-18  Score=132.97  Aligned_cols=98  Identities=29%  Similarity=0.486  Sum_probs=81.8

Q ss_pred             hhhhhhhcccccccceeecCccceeEEEEEECCCC---cE-EEEEEecc-cccCHHHHHHHHHHHHHHhcCCCCCcccee
Q psy360           98 KEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTG---VA-VAWCELQE-KKLNKAERARFREEAEMLKGLQHPNIVSFY  172 (199)
Q Consensus        98 ~~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~---~~-~a~k~~~~-~~~~~~~~~~~~~E~~~l~~l~h~niv~l~  172 (199)
                      ....|+...++..+.+.||+|+||.||+|.....+   .. ||+|.... ..........|.+|+++|++++|+|||+++
T Consensus       148 ~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~y  227 (474)
T KOG0194|consen  148 PRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFY  227 (474)
T ss_pred             cccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence            45567777778888899999999999999765432   23 89988764 235566788999999999999999999999


Q ss_pred             eeeeeeecCCceEEEEEeccCCCCCCC
Q psy360          173 GYWEVTLTKRKYIVLVTELMTSGTLKT  199 (199)
Q Consensus       173 ~~~~~~~~~~~~~~lv~E~~~~G~L~~  199 (199)
                      |++.    ...+++||||+|+||+|++
T Consensus       228 GVa~----~~~Pl~ivmEl~~gGsL~~  250 (474)
T KOG0194|consen  228 GVAV----LEEPLMLVMELCNGGSLDD  250 (474)
T ss_pred             EEEc----CCCccEEEEEecCCCcHHH
Confidence            9887    8899999999999999864

>KOG0197|consensus

Probab=99.73  E-value=3.1e-18  Score=133.58  Aligned_cols=92  Identities=33%  Similarity=0.481  Sum_probs=77.5

Q ss_pred             hhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360           99 EEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus        99 ~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      .+.|+..++.+++.+.||+|.||.|+.|.+.++. .+|+|.+......   .+.|.+|+.+|++|+|+|||+|++.|.  
T Consensus       198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~-~vavk~ik~~~m~---~~~f~~Ea~iMk~L~H~~lV~l~gV~~--  271 (468)
T KOG0197|consen  198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGST-KVAVKTIKEGSMS---PEAFLREAQIMKKLRHEKLVKLYGVCT--  271 (468)
T ss_pred             cCCeeecHHHHHHHHHhcCCccceEEEEEEcCCC-cccceEEeccccC---hhHHHHHHHHHHhCcccCeEEEEEEEe--
Confidence            5566777788999999999999999999987652 4678887654333   356889999999999999999999997  


Q ss_pred             ecCCceEEEEEeccCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~  198 (199)
                        .+.++|||||||+.|+|.
T Consensus       272 --~~~piyIVtE~m~~GsLl  289 (468)
T KOG0197|consen  272 --KQEPIYIVTEYMPKGSLL  289 (468)
T ss_pred             --cCCceEEEEEecccCcHH
Confidence              667899999999999985

>KOG0575|consensus

Probab=99.72  E-value=1.9e-17  Score=131.14  Aligned_cols=88  Identities=33%  Similarity=0.532  Sum_probs=79.6

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ..|+..+.||+|+|++||++++..+|..+|+|.+.++.+ .....+.+.+||+|.++|+|||||+++++|+    +.+++
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FE----Ds~nV   93 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFE----DSNNV   93 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEee----cCCce
Confidence            578999999999999999999999999999999976544 3346788999999999999999999999999    88999


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |||+|+|.+|+|-
T Consensus        94 YivLELC~~~sL~  106 (592)
T KOG0575|consen   94 YIVLELCHRGSLM  106 (592)
T ss_pred             EEEEEecCCccHH
Confidence            9999999999873

>KOG0603|consensus

Probab=99.72  E-value=6.2e-18  Score=134.49  Aligned_cols=84  Identities=30%  Similarity=0.368  Sum_probs=69.0

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..+.|.+...+|.|+|+.|..|.+..++...++|.+.+..      .+..+|+.++... +|+||+++.+.+.    ++.
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~------~~~~~e~~~~~~~~~h~niv~~~~v~~----~~~  389 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA------DDNQDEIPISLLVRDHPNIVKSHDVYE----DGK  389 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheeccccc------cccccccchhhhhcCCCcceeecceec----CCc
Confidence            3456777888999999999999999999999999986541      2244567666555 6999999999887    789


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..|+|||++.||.|.
T Consensus       390 ~~~~v~e~l~g~ell  404 (612)
T KOG0603|consen  390 EIYLVMELLDGGELL  404 (612)
T ss_pred             eeeeeehhccccHHH
Confidence            999999999998764

>KOG0591|consensus

Probab=99.69  E-value=1.4e-18  Score=126.42  Aligned_cols=90  Identities=31%  Similarity=0.457  Sum_probs=79.5

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceee-eeeeeecCCce
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYG-YWEVTLTKRKY  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~~~~~  184 (199)
                      ...|++.+.||+|+||.||++.+..++..+|+|.++-.....+..+....|+.+|++|+|||||++++ -+.   .+.+-
T Consensus        18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~---~~~ev   94 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFI---EDNEV   94 (375)
T ss_pred             HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhh---ccchh
Confidence            45689999999999999999999999999999999877778888899999999999999999999988 443   13444


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      ++||||||.+|+|.
T Consensus        95 lnivmE~c~~GDLs  108 (375)
T KOG0591|consen   95 LNIVMELCDAGDLS  108 (375)
T ss_pred             hHHHHHhhcccCHH
Confidence            89999999999983

>KOG1026|consensus

Probab=99.67  E-value=3.4e-17  Score=134.04  Aligned_cols=96  Identities=35%  Similarity=0.496  Sum_probs=80.9

Q ss_pred             hhhhhhhcccccccceeecCccceeEEEEEEC-----CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCcccee
Q psy360           98 KEEERESMRGYLKFEEEIGRGSFKTVYRGLDT-----QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFY  172 (199)
Q Consensus        98 ~~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~  172 (199)
                      +....+..+.+.++.+.||+|+||+||+|...     .....||||.++.. ...+.+++|.+|++++..++|||||+|+
T Consensus       477 ~~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~REaeLla~l~H~nIVrLl  555 (774)
T KOG1026|consen  477 DLKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK-AENQARQDFRREAELLAELQHPNIVRLL  555 (774)
T ss_pred             ccceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc-ccHHHHHHHHHHHHHHHhccCCCeEEEE
Confidence            33344566778888999999999999999643     34567999999743 3555788999999999999999999999


Q ss_pred             eeeeeeecCCceEEEEEeccCCCCCC
Q psy360          173 GYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       173 ~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      |.|.    .+++.+||+|||..|+|.
T Consensus       556 GVC~----~~~P~~MvFEYm~~GDL~  577 (774)
T KOG1026|consen  556 GVCR----EGDPLCMVFEYMDHGDLH  577 (774)
T ss_pred             EEEc----cCCeeEEEEEecccccHH
Confidence            9998    899999999999999985

>KOG0581|consensus

Probab=99.66  E-value=2.2e-16  Score=118.69  Aligned_cols=88  Identities=28%  Similarity=0.362  Sum_probs=77.9

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc-e
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK-Y  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~-~  184 (199)
                      .+.++..+.||+|..|.|+++.++.+++.+|+|.+. .......++++.+|++++.+++||+||.++|.|.    .+. .
T Consensus        78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~-~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~----~~~~~  152 (364)
T KOG0581|consen   78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVIL-LNIDPALQKQILRELEILRSCQSPYIVGFYGAFY----SNGEE  152 (364)
T ss_pred             HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeec-ccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE----eCCce
Confidence            346777899999999999999999999999999994 3445667788999999999999999999999887    455 6


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      ++|+||||++|+|+
T Consensus       153 isI~mEYMDgGSLd  166 (364)
T KOG0581|consen  153 ISICMEYMDGGSLD  166 (364)
T ss_pred             EEeehhhcCCCCHH
Confidence            99999999999996

>KOG0192|consensus

Probab=99.66  E-value=3e-16  Score=121.54  Aligned_cols=88  Identities=41%  Similarity=0.622  Sum_probs=73.4

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc-e
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK-Y  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~-~  184 (199)
                      ...+.....+|+|+||+||+|.++++.. +|+|.+..........+.|.+|+.+|.+++|||||+++|+|.    ... .
T Consensus        40 ~~~l~~~~~iG~G~~g~V~~~~~~g~~~-vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~----~~~~~  114 (362)
T KOG0192|consen   40 PDELPIEEVLGSGSFGTVYKGKWRGTDV-VAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACT----SPPGS  114 (362)
T ss_pred             hHHhhhhhhcccCCceeEEEEEeCCcee-EEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEc----CCCCc
Confidence            3445556679999999999999877643 899998766555555778999999999999999999999986    444 6


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      ..||||||++|+|.
T Consensus       115 ~~iVtEy~~~GsL~  128 (362)
T KOG0192|consen  115 LCIVTEYMPGGSLS  128 (362)
T ss_pred             eEEEEEeCCCCcHH
Confidence            89999999999985

>KOG0593|consensus

Probab=99.66  E-value=9.9e-17  Score=117.94  Aligned_cols=84  Identities=24%  Similarity=0.318  Sum_probs=74.2

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      .|+.+.++|+|+||.||+|+++.+|+.||+|+.....-.+.-.+-.++|++.|++++|+|+|.|+..|.    ....++|
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFr----rkrklhL   78 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFR----RKRKLHL   78 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHH----hcceeEE
Confidence            467788999999999999999999999999998765544445677899999999999999999999998    8899999


Q ss_pred             EEeccCCC
Q psy360          188 VTELMTSG  195 (199)
Q Consensus       188 v~E~~~~G  195 (199)
                      |+|||+.-
T Consensus        79 VFE~~dhT   86 (396)
T KOG0593|consen   79 VFEYCDHT   86 (396)
T ss_pred             EeeecchH
Confidence            99999853

>KOG0600|consensus

Probab=99.66  E-value=1.6e-16  Score=123.56  Aligned_cols=87  Identities=26%  Similarity=0.334  Sum_probs=75.5

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.|+.++.||+|.||+||++++..+|..||+|++..............+||.||++|+||||++|.+...+.  ....+
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~--~~~si  193 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK--LSGSI  193 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec--CCceE
Confidence            4568889999999999999999999999999999987665556667789999999999999999999976521  24789


Q ss_pred             EEEEeccCC
Q psy360          186 VLVTELMTS  194 (199)
Q Consensus       186 ~lv~E~~~~  194 (199)
                      |||+|||++
T Consensus       194 YlVFeYMdh  202 (560)
T KOG0600|consen  194 YLVFEYMDH  202 (560)
T ss_pred             EEEEecccc
Confidence            999999986

>KOG0580|consensus

Probab=99.65  E-value=7.9e-17  Score=114.70  Aligned_cols=91  Identities=29%  Similarity=0.464  Sum_probs=79.6

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ...++|.+++.||+|.||.||.|+.+.++..+|+|.+.+..+... ..+.+.+|++|-+.|+||||+++++||.    +.
T Consensus        19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fh----d~   94 (281)
T KOG0580|consen   19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFH----DS   94 (281)
T ss_pred             cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhee----cc
Confidence            345678999999999999999999999999999999876543222 3567899999999999999999999999    88


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ..+||++||.++|+|.
T Consensus        95 ~riyLilEya~~gel~  110 (281)
T KOG0580|consen   95 KRIYLILEYAPRGELY  110 (281)
T ss_pred             ceeEEEEEecCCchHH
Confidence            9999999999999873

>KOG0598|consensus

Probab=99.64  E-value=3.5e-16  Score=117.49  Aligned_cols=91  Identities=25%  Similarity=0.364  Sum_probs=81.2

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ...+.|++++.||+|+||+|+..+...+++.+|+|.++++..... +......|..|+.+++||+||+|+-.|+    +.
T Consensus        22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQ----t~   97 (357)
T KOG0598|consen   22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQ----TE   97 (357)
T ss_pred             CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecc----cC
Confidence            345689999999999999999999999999999999987665443 6677899999999999999999999887    78


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ..+|||+||+.||+|+
T Consensus        98 ~kLylVld~~~GGeLf  113 (357)
T KOG0598|consen   98 EKLYLVLDYLNGGELF  113 (357)
T ss_pred             CeEEEEEeccCCccHH
Confidence            9999999999999985

>KOG0605|consensus

Probab=99.63  E-value=1e-15  Score=119.80  Aligned_cols=90  Identities=22%  Similarity=0.395  Sum_probs=79.0

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ..-++|++++.||+|+||.||+|+-+.+|..+|+|.+.+..... .+..-...|-.+|....+++||+|+-.|.    +.
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQ----D~  213 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQ----DK  213 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEec----CC
Confidence            34567999999999999999999999999999999998765433 34566788999999999999999999888    88


Q ss_pred             ceEEEEEeccCCCCC
Q psy360          183 KYIVLVTELMTSGTL  197 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L  197 (199)
                      +++||||||++||++
T Consensus       214 ~~LYLiMEylPGGD~  228 (550)
T KOG0605|consen  214 EYLYLIMEYLPGGDM  228 (550)
T ss_pred             CeeEEEEEecCCccH
Confidence            999999999999986

>KOG0032|consensus

Probab=99.62  E-value=1.1e-15  Score=119.37  Aligned_cols=93  Identities=33%  Similarity=0.525  Sum_probs=81.8

Q ss_pred             hhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCC-CCCccceeeeeeeeec
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLT  180 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~  180 (199)
                      ......|++.+.||+|.||.||+|..+.+|..+|+|.+....... ...+.+.+|+.+|+++. |||||++.+.|.    
T Consensus        31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e----  106 (382)
T KOG0032|consen   31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFE----  106 (382)
T ss_pred             ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEE----
Confidence            455678999999999999999999999999999999997665433 24567999999999998 999999999998    


Q ss_pred             CCceEEEEEeccCCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLKT  199 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~~  199 (199)
                      .....++|||+|+||+|++
T Consensus       107 ~~~~~~lvmEL~~GGeLfd  125 (382)
T KOG0032|consen  107 DPDSVYLVMELCEGGELFD  125 (382)
T ss_pred             cCCeEEEEEEecCCchHHH
Confidence            7789999999999999864

>KOG0597|consensus

Probab=99.61  E-value=2.8e-16  Score=124.07  Aligned_cols=87  Identities=32%  Similarity=0.416  Sum_probs=79.7

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ++|.+.+.||+|+||+||+|+.+.+...||+|.+.+.....++.+.+.+|++|+++++|||||.++++|+    .....+
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfE----t~~~~~   77 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFE----TSAHLW   77 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhc----ccceEE
Confidence            3577788999999999999999999999999999887778888899999999999999999999999998    788999


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +|.|||.| +|+
T Consensus        78 vVte~a~g-~L~   88 (808)
T KOG0597|consen   78 VVTEYAVG-DLF   88 (808)
T ss_pred             EEehhhhh-hHH
Confidence            99999987 664

>KOG0610|consensus

Probab=99.61  E-value=1.4e-15  Score=115.96  Aligned_cols=91  Identities=26%  Similarity=0.347  Sum_probs=80.1

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ...+.+++++.||+|..|+||++...+++..+|+|.+.+..+. .+...+..-|-+||+.++||.++.|++.|+    .+
T Consensus        74 l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fe----t~  149 (459)
T KOG0610|consen   74 LGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFE----TD  149 (459)
T ss_pred             cCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheee----cc
Confidence            3446789999999999999999999999999999999766544 334566788999999999999999999998    88


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ++.|+|||||+||+|.
T Consensus       150 ~~~cl~meyCpGGdL~  165 (459)
T KOG0610|consen  150 KYSCLVMEYCPGGDLH  165 (459)
T ss_pred             ceeEEEEecCCCccHH
Confidence            9999999999999985

>KOG1094|consensus

Probab=99.60  E-value=8e-16  Score=121.86  Aligned_cols=90  Identities=33%  Similarity=0.467  Sum_probs=77.1

Q ss_pred             hhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      +..++.+.+.++||+|.||.|.+|+..+ +..||+|.++... ......+|.+|+++|.+|+||||++|+|.|.    .+
T Consensus       534 EfPRs~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a-~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~----~D  607 (807)
T KOG1094|consen  534 EFPRSRLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDA-TKNARNDFLKEIKILSRLKHPNIVELLGVCV----QD  607 (807)
T ss_pred             hcchhheehhhhhcCcccceeEEEEecC-ceEEEEeecCccc-chhHHHHHHHHHHHHhccCCCCeeEEEeeee----cC
Confidence            4456678889999999999999998544 6789999987543 3445688999999999999999999999988    88


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +.+++|+|||++|+|.
T Consensus       608 ePicmI~EYmEnGDLn  623 (807)
T KOG1094|consen  608 DPLCMITEYMENGDLN  623 (807)
T ss_pred             CchHHHHHHHhcCcHH
Confidence            9999999999999984

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.60  E-value=4.6e-15  Score=116.92  Aligned_cols=87  Identities=18%  Similarity=0.324  Sum_probs=76.0

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      .|+.++.||+|+||+||++.+..++..+|+|.+..... .......+.+|+.++..++|+||+++++++.    ..+..|
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~----~~~~~~   77 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQ----DKDNLY   77 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEe----cCCEEE
Confidence            57788999999999999999999999999999875433 2334567899999999999999999999987    778999


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||++||+|.
T Consensus        78 lv~E~~~gg~L~   89 (381)
T cd05626          78 FVMDYIPGGDMM   89 (381)
T ss_pred             EEEecCCCCcHH
Confidence            999999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0598|consensus

Probab=99.59  E-value=1.2e-15  Score=114.60  Aligned_cols=65  Identities=28%  Similarity=0.492  Sum_probs=53.8

Q ss_pred             cCcceeeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhc
Q psy360            3 CNKSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus         3 ~~~~~~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      |+.+.++.+.|||+.|||||++. ..|+..+|+||+||++|+|++|..||.. .+.....+++....
T Consensus       176 ~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~-~~~~~~~~~I~~~k  241 (357)
T KOG0598|consen  176 LKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA-EDVKKMYDKILKGK  241 (357)
T ss_pred             ccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC-ccHHHHHHHHhcCc
Confidence            34556677889999999999776 6799999999999999999999999976 45566667776654

>KOG0611|consensus

Probab=99.59  E-value=5.9e-16  Score=118.18  Aligned_cols=91  Identities=25%  Similarity=0.532  Sum_probs=80.1

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      .+.+|++.+.||+|.||+|-++.....|+.||+|.+.+..+.++ +.-.+.+|++||+.|+||||++++..|+    ..+
T Consensus        51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFE----Nkd  126 (668)
T KOG0611|consen   51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFE----NKD  126 (668)
T ss_pred             hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhc----CCc
Confidence            34578999999999999999999989999999999987765443 3445789999999999999999999998    889


Q ss_pred             eEEEEEeccCCCCCCC
Q psy360          184 YIVLVTELMTSGTLKT  199 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~~  199 (199)
                      .+.|||||..+|+|.|
T Consensus       127 KIvivMEYaS~GeLYD  142 (668)
T KOG0611|consen  127 KIVIVMEYASGGELYD  142 (668)
T ss_pred             eEEEEEEecCCccHHH
Confidence            9999999999999864

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.59  E-value=4.4e-15  Score=117.58  Aligned_cols=92  Identities=27%  Similarity=0.299  Sum_probs=75.9

Q ss_pred             hhhcccccccceeecCccceeEEEEEECCC-----CcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeeee
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQT-----GVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYW  175 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~-----~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~  175 (199)
                      +...++.|.+++.||+|+||.||+|.+...     ...||+|.+... ......+.+.+|+.+++++. ||||++++++|
T Consensus        32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~  110 (400)
T cd05105          32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPT-ARSSEKQALMSELKIMTHLGPHLNIVNLLGAC  110 (400)
T ss_pred             eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCC-CChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence            444567899999999999999999986432     346999988643 23445577999999999996 99999999998


Q ss_pred             eeeecCCceEEEEEeccCCCCCC
Q psy360          176 EVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       176 ~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      .    ..+..|||||||++|+|.
T Consensus       111 ~----~~~~~~lv~Ey~~~g~L~  129 (400)
T cd05105         111 T----KSGPIYIITEYCFYGDLV  129 (400)
T ss_pred             c----cCCceEEEEEecCCCcHH
Confidence            7    678899999999999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.58  E-value=7.2e-15  Score=115.62  Aligned_cols=87  Identities=25%  Similarity=0.402  Sum_probs=75.4

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +|++.+.||+|+||.||++.+..++..+|+|.+..... .....+.+.+|+.++.+++||||+++++++.    ..+..|
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~----~~~~~~   77 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQ----DAQYLY   77 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEE----cCCeeE
Confidence            57888999999999999999999999999999864332 2234566889999999999999999999987    788999


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      |||||++||+|.
T Consensus        78 lv~E~~~gg~L~   89 (377)
T cd05629          78 LIMEFLPGGDLM   89 (377)
T ss_pred             EEEeCCCCCcHH
Confidence            999999999984

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0659|consensus

Probab=99.58  E-value=2.4e-15  Score=108.73  Aligned_cols=83  Identities=27%  Similarity=0.444  Sum_probs=73.2

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      .|...+.+|+|.||.||+|.+..+++.||+|++......+.-.-...+|+..|+.++|+||+.|+++|-    ..+.+.|
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~----~~~~l~l   78 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFP----HKSNLSL   78 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhcc----CCCceEE
Confidence            467788999999999999999999999999999876544444566899999999999999999999887    7888999


Q ss_pred             EEeccCC
Q psy360          188 VTELMTS  194 (199)
Q Consensus       188 v~E~~~~  194 (199)
                      |+|||+.
T Consensus        79 VfEfm~t   85 (318)
T KOG0659|consen   79 VFEFMPT   85 (318)
T ss_pred             EEEeccc
Confidence            9999984

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.58  E-value=6.3e-15  Score=115.39  Aligned_cols=88  Identities=25%  Similarity=0.406  Sum_probs=75.9

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.++..++|+||+++++++.    .++..
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~----~~~~~   76 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQ----DENYL   76 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE----cCCeE
Confidence            3578899999999999999999999999999998654322 233456788999999999999999999887    78899


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ||||||+++|+|.
T Consensus        77 ~lv~E~~~~g~L~   89 (364)
T cd05599          77 YLIMEYLPGGDMM   89 (364)
T ss_pred             EEEECCCCCcHHH
Confidence            9999999999884

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG1095|consensus

Probab=99.58  E-value=3.7e-15  Score=126.12  Aligned_cols=89  Identities=28%  Similarity=0.418  Sum_probs=75.4

Q ss_pred             cccccccceeecCccceeEEEEEECCC-----CcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQT-----GVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~-----~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      .+...++.+.||+|.||.||.|...+.     ...||+|.+.+ .....+..+|.+|+.+|++++|||||+++|.|.   
T Consensus       690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~-~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l---  765 (1025)
T KOG1095|consen  690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKR-LSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCL---  765 (1025)
T ss_pred             ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccc-cCCHHHHHHHHHHHHHHhcCCCcceeeEEEeec---
Confidence            356788899999999999999976543     34589998863 335667788999999999999999999999887   


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                       +....+|++|||+||+|.
T Consensus       766 -~~~~~~i~leyM~gGDL~  783 (1025)
T KOG1095|consen  766 -DSGPPLILLEYMEGGDLL  783 (1025)
T ss_pred             -CCCCcEEEehhcccCcHH
Confidence             677889999999999985

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.57  E-value=1.1e-14  Score=114.90  Aligned_cols=87  Identities=17%  Similarity=0.295  Sum_probs=75.4

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      .|+..+.||+|+||.||++.+..++..+|+|.+..... .....+.+.+|+.++++++|+||+++++.+.    ..+..|
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~----~~~~~~   77 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQ----DKDNLY   77 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEE----eCCEEE
Confidence            47788999999999999999999999999999865432 2234567889999999999999999999887    678999


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +|||||++|+|.
T Consensus        78 lv~E~~~gg~L~   89 (382)
T cd05625          78 FVMDYIPGGDMM   89 (382)
T ss_pred             EEEeCCCCCcHH
Confidence            999999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.57  E-value=9.9e-15  Score=114.79  Aligned_cols=87  Identities=17%  Similarity=0.284  Sum_probs=75.2

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      .|++.+.||+|+||.||++.+..++..+|+|.+...... ....+.+.+|+.++++++|+||+++++.+.    .++..|
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~----~~~~~~   77 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQ----DKDNLY   77 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEE----cCCEEE
Confidence            578899999999999999999999999999998643322 223456889999999999999999999887    788999


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +|||||++|+|.
T Consensus        78 lv~E~~~~g~L~   89 (376)
T cd05598          78 FVMDYIPGGDMM   89 (376)
T ss_pred             EEEeCCCCCcHH
Confidence            999999999985

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0616|consensus

Probab=99.57  E-value=3e-15  Score=109.75  Aligned_cols=65  Identities=29%  Similarity=0.528  Sum_probs=56.2

Q ss_pred             eeeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhccccC
Q psy360            7 YVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSA   72 (199)
Q Consensus         7 ~~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~~~~   72 (199)
                      .++.+.||||.|+|||+++ +.++.++|+|+|||++|||+.|..||.. .++-+.+++|+...+..+
T Consensus       196 ~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~-~~~~~iY~KI~~~~v~fP  261 (355)
T KOG0616|consen  196 GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYD-DNPIQIYEKILEGKVKFP  261 (355)
T ss_pred             CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcC-CChHHHHHHHHhCcccCC
Confidence            4577899999999999887 7799999999999999999999999987 455788899988766543

>KOG0586|consensus

Probab=99.57  E-value=9.4e-15  Score=116.10  Aligned_cols=90  Identities=30%  Similarity=0.480  Sum_probs=81.8

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ...|.+.+.||+|.|++|.++.+..++..||+|.+.+........+.+.+|+.+|..++|||||+++++..    ....+
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~----t~~~l  130 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE----TEATL  130 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee----eccee
Confidence            45789999999999999999999999999999999887777776667999999999999999999999887    78899


Q ss_pred             EEEEeccCCCCCCC
Q psy360          186 VLVTELMTSGTLKT  199 (199)
Q Consensus       186 ~lv~E~~~~G~L~~  199 (199)
                      |+||||+.+|++++
T Consensus       131 ylV~eya~~ge~~~  144 (596)
T KOG0586|consen  131 YLVMEYASGGELFD  144 (596)
T ss_pred             EEEEEeccCchhHH
Confidence            99999999998863

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.57  E-value=1.1e-14  Score=112.58  Aligned_cols=89  Identities=22%  Similarity=0.334  Sum_probs=76.9

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      .+.|++.+.||+|+||.||+|.+..++..+|+|.+..... .....+.+.+|+.++++++||||+++++++.    ..+.
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----~~~~   92 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQ----DENR   92 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEE----cCCE
Confidence            3568899999999999999999999999999999865432 2234567889999999999999999999887    7789


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .|+||||+++|+|.
T Consensus        93 ~~lv~e~~~~~~L~  106 (329)
T PTZ00263         93 VYFLLEFVVGGELF  106 (329)
T ss_pred             EEEEEcCCCCChHH
Confidence            99999999999884

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.57  E-value=1.6e-14  Score=111.82  Aligned_cols=89  Identities=24%  Similarity=0.344  Sum_probs=77.6

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..++|++.+.||+|+||.||++.+..++..+++|.+... ........+.+|++++++++|+||++++++|.    .++.
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~   77 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFY----SDGE   77 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecc-cCHHHHHHHHHHHHHHHHCCCCcccceeEEEE----ECCE
Confidence            346789999999999999999999999999999987643 23445567899999999999999999999987    6789


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++|+|.
T Consensus        78 ~~lv~e~~~~~~L~   91 (333)
T cd06650          78 ISICMEHMDGGSLD   91 (333)
T ss_pred             EEEEEecCCCCcHH
Confidence            99999999999985

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0585|consensus

Probab=99.56  E-value=1.4e-14  Score=112.33  Aligned_cols=93  Identities=27%  Similarity=0.373  Sum_probs=78.2

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH------------HHHHHHHHHHHHhcCCCCCccce
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA------------ERARFREEAEMLKGLQHPNIVSF  171 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~------------~~~~~~~E~~~l~~l~h~niv~l  171 (199)
                      ...+.|+++..||+|.||+|.++++..++..||+|.+.+......            ..+...+||.+|++|+|+|||+|
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            345678999999999999999999999999999999976543221            13578999999999999999999


Q ss_pred             eeeeeeeecCCceEEEEEeccCCCCCC
Q psy360          172 YGYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       172 ~~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      +.+-.+  ...+.+|||+|||..|.+.
T Consensus       174 iEvLDD--P~s~~~YlVley~s~G~v~  198 (576)
T KOG0585|consen  174 IEVLDD--PESDKLYLVLEYCSKGEVK  198 (576)
T ss_pred             EEeecC--cccCceEEEEEeccCCccc
Confidence            997653  3567899999999999874

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.56  E-value=1.6e-14  Score=111.77  Aligned_cols=87  Identities=20%  Similarity=0.349  Sum_probs=75.4

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      .|++.+.||+|+||.||+|.+..++..+|+|.+....... .....+.+|+.++..++|+||+++++++.    ..+..|
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~----~~~~~~   77 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ----DDEYLY   77 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE----cCCEEE
Confidence            5788999999999999999999999999999986543222 24466889999999999999999999887    788999


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      |||||+++|+|.
T Consensus        78 lv~e~~~g~~L~   89 (333)
T cd05600          78 LAMEYVPGGDFR   89 (333)
T ss_pred             EEEeCCCCCCHH
Confidence            999999999885

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.56  E-value=2.4e-14  Score=110.79  Aligned_cols=88  Identities=24%  Similarity=0.329  Sum_probs=77.2

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .++|++.+.||+|+||.||++.+..++..+|+|.+... ......+.+.+|+.++++++|+||+++++++.    .++..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~   78 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFY----SDGEI   78 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecc-cCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE----ECCEE
Confidence            46789999999999999999999999999999988643 23445567999999999999999999999887    67789


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        79 ~lv~e~~~~~~L~   91 (331)
T cd06649          79 SICMEHMDGGSLD   91 (331)
T ss_pred             EEEeecCCCCcHH
Confidence            9999999999985

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.56  E-value=6.1e-15  Score=114.34  Aligned_cols=93  Identities=23%  Similarity=0.306  Sum_probs=74.6

Q ss_pred             hhhcccccccceeecCccceeEEEEEEC-----CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeee
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDT-----QTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYW  175 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~  175 (199)
                      |+...++|++.+.||+|+||.||+|.+.     .++..||+|.+... ......+.+.+|+.++..+ +||||++++++|
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   80 (338)
T cd05102           2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG-ATASEHKALMSELKILIHIGNHLNVVNLLGAC   80 (338)
T ss_pred             cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccc-cchHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence            3455678999999999999999999752     34567999988643 2334456789999999999 899999999987


Q ss_pred             eeeecCCceEEEEEeccCCCCCC
Q psy360          176 EVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       176 ~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ..   .....++||||+++|+|.
T Consensus        81 ~~---~~~~~~lv~ey~~~g~L~  100 (338)
T cd05102          81 TK---PNGPLMVIVEFCKYGNLS  100 (338)
T ss_pred             cC---CCCceEEEEecCCCCcHH
Confidence            52   345789999999999984

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.56  E-value=1.6e-14  Score=113.07  Aligned_cols=88  Identities=20%  Similarity=0.294  Sum_probs=75.4

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ++|++.+.||+|+||+||++.+..++..+|+|.+...... ......+.+|+.++.+++|+||+++++.+.    .....
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~----~~~~~   76 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQ----DKLNL   76 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEe----cCCeE
Confidence            3578899999999999999999999999999998654322 223456888999999999999999999887    77889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |||||||+||+|.
T Consensus        77 ~lv~E~~~gg~L~   89 (363)
T cd05628          77 YLIMEFLPGGDMM   89 (363)
T ss_pred             EEEEcCCCCCcHH
Confidence            9999999999874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0583|consensus

Probab=99.55  E-value=1.2e-14  Score=113.49  Aligned_cols=92  Identities=26%  Similarity=0.371  Sum_probs=76.9

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccC---HHHHHHHHHHHHHHhcCC-CCCccceeeeeeeee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN---KAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTL  179 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~  179 (199)
                      .....|.+.+.||+|+||+|+.|.+..++..+|+|.+.+....   ....+.+.+|+.+++.++ ||||++++.++.   
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~---   90 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA---   90 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe---
Confidence            3456789999999999999999999999999999977654221   123455678999999998 999999999887   


Q ss_pred             cCCceEEEEEeccCCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLKT  199 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~~  199 (199)
                       ....+|+|||||.||+|++
T Consensus        91 -t~~~~~ivmEy~~gGdL~~  109 (370)
T KOG0583|consen   91 -TPTKIYIVMEYCSGGDLFD  109 (370)
T ss_pred             -cCCeEEEEEEecCCccHHH
Confidence             6677999999999999863

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.55  E-value=1.1e-14  Score=114.53  Aligned_cols=91  Identities=27%  Similarity=0.350  Sum_probs=75.0

Q ss_pred             hhcccccccceeecCccceeEEEEEE-----CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLD-----TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWE  176 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~-----~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~  176 (199)
                      ....++|++.+.||+|+||.||+|.+     ..++..+|+|.+.... .....+.+.+|+.++..+ +||||++++++|.
T Consensus        31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~  109 (375)
T cd05104          31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHINIVNLLGACT  109 (375)
T ss_pred             ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-CcHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence            34456789999999999999999964     3456789999886432 233456788999999999 8999999999987


Q ss_pred             eeecCCceEEEEEeccCCCCCC
Q psy360          177 VTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       177 ~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                          ..+..++|||||++|+|.
T Consensus       110 ----~~~~~~lv~E~~~~g~L~  127 (375)
T cd05104         110 ----VGGPTLVITEYCCYGDLL  127 (375)
T ss_pred             ----cCCcceeeehhccCCcHH
Confidence                778899999999999984

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.55  E-value=1.1e-14  Score=110.72  Aligned_cols=87  Identities=18%  Similarity=0.259  Sum_probs=74.6

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +|++.+.||+|+||.||++.+..++..+|+|.+...... ....+.+.+|+.++++++||||+++++++.    +.+..|
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----~~~~~~   77 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH----DQRFLY   77 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc----cCCeEE
Confidence            578889999999999999999999999999998643322 234466889999999999999999999877    678899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        78 lv~e~~~~~~L~   89 (291)
T cd05612          78 MLMEYVPGGELF   89 (291)
T ss_pred             EEEeCCCCCCHH
Confidence            999999999874

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.55  E-value=2.2e-14  Score=107.56  Aligned_cols=88  Identities=30%  Similarity=0.440  Sum_probs=73.8

Q ss_pred             ccccccceeecCccceeEEEEEEC---CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDT---QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~---~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      .+.|++.+.||+|+||.||+|.+.   ..+..+|+|.+... ........+.+|+.++.+++||||+++++++.    .+
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----~~   78 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAG-CSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT----RG   78 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCC-CCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe----cC
Confidence            356889999999999999999764   45678999988643 23445567999999999999999999999887    67


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..++||||+++|+|.
T Consensus        79 ~~~~lv~e~~~~~~L~   94 (266)
T cd05064          79 NTMMIVTEYMSNGALD   94 (266)
T ss_pred             CCcEEEEEeCCCCcHH
Confidence            8899999999999885

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0616|consensus

Probab=99.55  E-value=9.7e-15  Score=107.14  Aligned_cols=90  Identities=23%  Similarity=0.333  Sum_probs=79.1

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      .-++|+..+.||.|+||+|.+.+++.++..+|+|.+...... .+..+-..+|..+|+.+.||++++|.+.|.    +.+
T Consensus        42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~----d~~  117 (355)
T KOG0616|consen   42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK----DNS  117 (355)
T ss_pred             chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeec----cCC
Confidence            346788899999999999999999999999999999765433 335567889999999999999999999887    789


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      .+||||||++||.|+
T Consensus       118 ~lymvmeyv~GGElF  132 (355)
T KOG0616|consen  118 NLYMVMEYVPGGELF  132 (355)
T ss_pred             eEEEEEeccCCccHH
Confidence            999999999999985

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.54  E-value=3.7e-14  Score=110.69  Aligned_cols=87  Identities=26%  Similarity=0.398  Sum_probs=75.5

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.++..+.||+|+||.||++.+..++..+|+|.+... ........+.+|+.+++.++|+||+++++++.    ..+..+
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~  148 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGN-HEDTVRRQICREIEILRDVNHPNVVKCHDMFD----HNGEIQ  148 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecC-CcHHHHHHHHHHHHHHHhCCCCCcceeeeEec----cCCeEE
Confidence            4577789999999999999999999999999998533 23344567899999999999999999999887    778899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus       149 lv~e~~~~~~L~  160 (353)
T PLN00034        149 VLLEFMDGGSLE  160 (353)
T ss_pred             EEEecCCCCccc
Confidence            999999999985

>KOG0694|consensus

Probab=99.54  E-value=4.9e-15  Score=119.09  Aligned_cols=62  Identities=26%  Similarity=0.480  Sum_probs=53.6

Q ss_pred             cceeeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360            5 KSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus         5 ~~~~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      ++..+.++||||.|||||++. ..|+.++|+|+|||+||||+.|..||.+ .+.++++..|+.-
T Consensus       521 ~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g-ddEee~FdsI~~d  583 (694)
T KOG0694|consen  521 QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG-DDEEEVFDSIVND  583 (694)
T ss_pred             CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHhcC
Confidence            466788999999999999988 5799999999999999999999999986 5666677766654

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=3.9e-14  Score=109.61  Aligned_cols=88  Identities=26%  Similarity=0.300  Sum_probs=75.4

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      +.|++.+.||+|+||.||++.+..++..+|+|.+..... .....+.+.+|+.++..++|+||+++++++.    ..+..
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~----~~~~~   76 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQ----DENNL   76 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEe----cCCeE
Confidence            357889999999999999999999999999999864322 2234566888999999999999999999887    77899


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |+||||+++|+|.
T Consensus        77 ~lv~e~~~g~~L~   89 (331)
T cd05597          77 YLVMDYYVGGDLL   89 (331)
T ss_pred             EEEEecCCCCcHH
Confidence            9999999999985

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.53  E-value=1.7e-14  Score=114.22  Aligned_cols=92  Identities=27%  Similarity=0.347  Sum_probs=76.0

Q ss_pred             hhhcccccccceeecCccceeEEEEEEC-----CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeeee
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDT-----QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYW  175 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~  175 (199)
                      +....+.+.+.+.||+|+||.||+|.+.     ..+..+|+|.+.... .....+.+.+|+.++.++. ||||++++++|
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~  110 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA-RSSEKQALMSELKIMSHLGPHLNIVNLLGAC  110 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC-ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence            4555677888999999999999999864     345689999996432 3334557889999999997 99999999988


Q ss_pred             eeeecCCceEEEEEeccCCCCCC
Q psy360          176 EVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       176 ~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      .    ..+..++||||+++|+|.
T Consensus       111 ~----~~~~~~iv~E~~~~g~L~  129 (401)
T cd05107         111 T----KGGPIYIITEYCRYGDLV  129 (401)
T ss_pred             c----cCCCcEEEEeccCCCcHH
Confidence            7    667899999999999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG4278|consensus

Probab=99.53  E-value=3.4e-15  Score=119.48  Aligned_cols=93  Identities=28%  Similarity=0.480  Sum_probs=81.5

Q ss_pred             hhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       100 ~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      +.|+.-+.......+||-|.||.||.|.|+.....||||.++.+.   -+.+.|+.|+.+|+.++|||+|+|+|.|.   
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt---MeveEFLkEAAvMKeikHpNLVqLLGVCT---  333 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCT---  333 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc---hhHHHHHHHHHHHHhhcCccHHHHhhhhc---
Confidence            556666667778899999999999999999999999999886543   24577999999999999999999999987   


Q ss_pred             cCCceEEEEEeccCCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLKT  199 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~~  199 (199)
                       ....+|||.|||..|+|.|
T Consensus       334 -~EpPFYIiTEfM~yGNLLd  352 (1157)
T KOG4278|consen  334 -HEPPFYIITEFMCYGNLLD  352 (1157)
T ss_pred             -cCCCeEEEEecccCccHHH
Confidence             8899999999999999853

>KOG0694|consensus

Probab=99.53  E-value=4e-14  Score=113.91  Aligned_cols=91  Identities=20%  Similarity=0.301  Sum_probs=80.5

Q ss_pred             hhcccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCC-CCCccceeeeeeeeec
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLT  180 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~  180 (199)
                      ...-++|.++++||+|+||+|+++..++++..+|+|.+++... ..++.+....|.+|+.... ||.+++|+.+|.    
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQ----  439 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQ----  439 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccc----
Confidence            4455789999999999999999999999999999999987654 4456788889999988885 999999999998    


Q ss_pred             CCceEEEEEeccCCCCC
Q psy360          181 KRKYIVLVTELMTSGTL  197 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L  197 (199)
                      ..+++|+||||+.||++
T Consensus       440 T~~~l~fvmey~~Ggdm  456 (694)
T KOG0694|consen  440 TKEHLFFVMEYVAGGDL  456 (694)
T ss_pred             cCCeEEEEEEecCCCcE
Confidence            89999999999999985

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.53  E-value=4.1e-14  Score=109.48  Aligned_cols=88  Identities=26%  Similarity=0.294  Sum_probs=75.3

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+..... .......+.+|+.++..++|+||+++++++.    ..+..
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~----~~~~~   76 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQ----DENYL   76 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE----cCCEE
Confidence            357889999999999999999999999999999864322 2234456888999999999999999999887    78899


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |+||||++||+|.
T Consensus        77 ~lv~Ey~~gg~L~   89 (331)
T cd05624          77 YLVMDYYVGGDLL   89 (331)
T ss_pred             EEEEeCCCCCcHH
Confidence            9999999999985

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.53  E-value=4e-14  Score=111.17  Aligned_cols=90  Identities=23%  Similarity=0.323  Sum_probs=76.9

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..+.|++.+.||+|+||.||++.+..++..+|+|.+...... ....+.+.+|+.+++.++||||+++++++.    .++
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~----~~~  116 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ----DDK  116 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE----cCC
Confidence            346789999999999999999999999999999998643322 223456788999999999999999999887    788


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..|+||||+++|+|.
T Consensus       117 ~~~lv~Ey~~gg~L~  131 (370)
T cd05621         117 YLYMVMEYMPGGDLV  131 (370)
T ss_pred             EEEEEEcCCCCCcHH
Confidence            999999999999985

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.53  E-value=4.6e-14  Score=107.85  Aligned_cols=88  Identities=32%  Similarity=0.474  Sum_probs=72.9

Q ss_pred             ccccccceeecCccceeEEEEEECC----------------CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCcc
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQ----------------TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV  169 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~----------------~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv  169 (199)
                      .+.|++.+.||+|+||.||+|.+..                ++..+|+|.+... ........+.+|+.++.+++||||+
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv   82 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD-ANKNARNDFLKEVKILSRLKDPNII   82 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCee
Confidence            4578889999999999999997532                3457999988643 2344566799999999999999999


Q ss_pred             ceeeeeeeeecCCceEEEEEeccCCCCCC
Q psy360          170 SFYGYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       170 ~l~~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++++++.    ..+..++||||+++|+|.
T Consensus        83 ~~~~~~~----~~~~~~lv~e~~~~~~L~  107 (304)
T cd05096          83 RLLGVCV----DEDPLCMITEYMENGDLN  107 (304)
T ss_pred             EEEEEEe----cCCceEEEEecCCCCcHH
Confidence            9999987    667899999999999874

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.53  E-value=3.3e-14  Score=107.70  Aligned_cols=86  Identities=22%  Similarity=0.316  Sum_probs=74.6

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      +|++.+.||+|+||.||++.+..++..+|+|.+..........+.+.+|+.+++.++|+||+++++++.    ..+..++
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~l   77 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFR----RRGKLYL   77 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEe----cCCEEEE
Confidence            578899999999999999999999999999998654333344567889999999999999999999887    6788999


Q ss_pred             EEeccCCCCC
Q psy360          188 VTELMTSGTL  197 (199)
Q Consensus       188 v~E~~~~G~L  197 (199)
                      ||||+++|.|
T Consensus        78 v~e~~~~~~l   87 (287)
T cd07848          78 VFEYVEKNML   87 (287)
T ss_pred             EEecCCCCHH
Confidence            9999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0196|consensus

Probab=99.53  E-value=1.3e-14  Score=118.28  Aligned_cols=96  Identities=31%  Similarity=0.487  Sum_probs=81.7

Q ss_pred             hhhhhhhcccccccceeecCccceeEEEEEECCCC---cEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeee
Q psy360           98 KEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTG---VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGY  174 (199)
Q Consensus        98 ~~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~---~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~  174 (199)
                      ..-.+++...+.++.++||.|.||.|++|+.+..+   ..||+|.++.. ...+.+.+|+.|+.||.+.+||||++|.|.
T Consensus       620 reFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGV  698 (996)
T KOG0196|consen  620 REFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGV  698 (996)
T ss_pred             HHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEE
Confidence            34455667778999999999999999999876544   57999999743 345567789999999999999999999998


Q ss_pred             eeeeecCCceEEEEEeccCCCCCC
Q psy360          175 WEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       175 ~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ..    ...++.||.|||++|+|+
T Consensus       699 VT----ks~PvMIiTEyMENGsLD  718 (996)
T KOG0196|consen  699 VT----KSKPVMIITEYMENGSLD  718 (996)
T ss_pred             Ee----cCceeEEEhhhhhCCcHH
Confidence            77    788999999999999996

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.52  E-value=7.5e-14  Score=106.97  Aligned_cols=86  Identities=26%  Similarity=0.351  Sum_probs=75.1

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      .|++.+.||+|+||.||++.+..++..+++|.+... ........+.+|++++.+++||||+++++++.    .++..++
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~l   76 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLE-IKPAIRNQIIRELKVLHECNSPYIVGFYGAFY----SDGEISI   76 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe----eCCEEEE
Confidence            578889999999999999999999999999987643 23445567889999999999999999999887    7789999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ||||+++|+|.
T Consensus        77 v~ey~~~~~L~   87 (308)
T cd06615          77 CMEHMDGGSLD   87 (308)
T ss_pred             EeeccCCCcHH
Confidence            99999999885

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG4250|consensus

Probab=99.52  E-value=3.2e-15  Score=120.50  Aligned_cols=89  Identities=35%  Similarity=0.595  Sum_probs=72.2

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee--cCCceEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL--TKRKYIV  186 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~~~~~  186 (199)
                      +...+.||+|+||.||+|+++.+|..+|+|...... .....+.+.+|++++++++|+|||++++.-++..  .......
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v   93 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV   93 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence            455678999999999999999999999999886432 4446788999999999999999999998654211  0134568


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +|||||+||+|+
T Consensus        94 lvmEyC~gGsL~  105 (732)
T KOG4250|consen   94 LVMEYCSGGSLR  105 (732)
T ss_pred             EEEeecCCCcHH
Confidence            999999999985

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.52  E-value=4.8e-14  Score=109.55  Aligned_cols=90  Identities=23%  Similarity=0.390  Sum_probs=74.7

Q ss_pred             cccccccceeecCccceeEEEEEECCCC-cEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTG-VAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~-~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ..+.|++.+.||+|+||.||++.+..++ ..+|+|.+..... .....+.+.+|+.++..++||||+++++++.    ..
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~----~~  103 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFK----DE  103 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEE----eC
Confidence            3456888999999999999999876554 6899998864432 2234567889999999999999999999987    67


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..|+||||+++|+|.
T Consensus       104 ~~~~lv~Ey~~~g~L~  119 (340)
T PTZ00426        104 SYLYLVLEFVIGGEFF  119 (340)
T ss_pred             CEEEEEEeCCCCCcHH
Confidence            8899999999999885

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.52  E-value=4.9e-14  Score=110.69  Aligned_cols=90  Identities=23%  Similarity=0.280  Sum_probs=76.6

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..+.|++.+.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.+++.++||||+++++++.    ..+
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~----~~~  116 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ----DDK  116 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe----cCC
Confidence            346789999999999999999999999999999998643322 223455788999999999999999999887    778


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..|+||||++||+|.
T Consensus       117 ~~~lv~Ey~~gg~L~  131 (370)
T cd05596         117 YLYMVMEYMPGGDLV  131 (370)
T ss_pred             EEEEEEcCCCCCcHH
Confidence            899999999999885

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0589|consensus

Probab=99.52  E-value=1.5e-14  Score=112.65  Aligned_cols=88  Identities=24%  Similarity=0.380  Sum_probs=79.1

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc-eE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK-YI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~-~~  185 (199)
                      +.|..++.+|+|+||.++...+...+..+++|.+.-.+.....+....+|+.++++++|||||.+.+.|.    .++ ..
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~----~~~~~l   79 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFE----EDGQLL   79 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchh----cCCceE
Confidence            4678889999999999999999999999999999887777777888999999999999999999999887    444 49


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      +|||+||+||+|.
T Consensus        80 ~Ivm~Y~eGg~l~   92 (426)
T KOG0589|consen   80 CIVMEYCEGGDLA   92 (426)
T ss_pred             EEEEeecCCCCHH
Confidence            9999999999974

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.52  E-value=5.5e-14  Score=106.52  Aligned_cols=86  Identities=27%  Similarity=0.368  Sum_probs=73.1

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      |+..+.||+|+||.||++.+..++..+|+|.+........ ....+.+|+.+++.++|+||+++++++.    .++..++
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~l   77 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE----TKDALCL   77 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeec----CCCeEEE
Confidence            6778899999999999999988999999999865433222 2345778999999999999999999887    6788999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ||||+++|+|.
T Consensus        78 v~e~~~~~~L~   88 (285)
T cd05605          78 VLTLMNGGDLK   88 (285)
T ss_pred             EEeccCCCcHH
Confidence            99999999884

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.51  E-value=7.2e-14  Score=109.35  Aligned_cols=87  Identities=22%  Similarity=0.343  Sum_probs=74.9

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      .|+..+.||+|+||.||++.+..++..+|+|.+..... .......+.+|+.++..++|+||+++++.+.    ..+..|
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~----~~~~~~   77 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ----DKRNLY   77 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE----cCCEEE
Confidence            57788999999999999999999999999999864322 2234566888999999999999999999887    778899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      |||||++||+|.
T Consensus        78 lv~E~~~gg~L~   89 (360)
T cd05627          78 LIMEFLPGGDMM   89 (360)
T ss_pred             EEEeCCCCccHH
Confidence            999999999874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.51  E-value=1.1e-13  Score=104.94  Aligned_cols=86  Identities=26%  Similarity=0.359  Sum_probs=73.4

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      |+..+.||+|+||.||++.+..++..+|+|.+....... .....+.+|+.++.+++|+||+++++++.    ..+..++
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~----~~~~~~l   77 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYE----TKDALCL   77 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEc----cCCeEEE
Confidence            567889999999999999999999999999986543322 23345788999999999999999999887    6788999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ||||+++|+|.
T Consensus        78 v~e~~~~g~L~   88 (285)
T cd05631          78 VLTIMNGGDLK   88 (285)
T ss_pred             EEEecCCCcHH
Confidence            99999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.51  E-value=8.7e-14  Score=109.33  Aligned_cols=91  Identities=23%  Similarity=0.324  Sum_probs=77.4

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ...+.|++.+.||+|+||.||++.+..++..+|+|.+..... .....+.+.+|+.+++.++||||+++++++.    ..
T Consensus        40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~----~~  115 (371)
T cd05622          40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ----DD  115 (371)
T ss_pred             cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE----cC
Confidence            344788999999999999999999999999999999864322 2223456788999999999999999999887    77


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..|+||||++||+|.
T Consensus       116 ~~~~lv~Ey~~gg~L~  131 (371)
T cd05622         116 RYLYMVMEYMPGGDLV  131 (371)
T ss_pred             CEEEEEEcCCCCCcHH
Confidence            8899999999999985

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.51  E-value=4.2e-14  Score=110.06  Aligned_cols=87  Identities=30%  Similarity=0.423  Sum_probs=75.5

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      .|++.+.||+|+||.||+|.+..++..+|+|.+....... .....+..|+.++..++|+||+++++++.    ..+..+
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~----~~~~~~   77 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQ----DEEHLY   77 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhee----cCCeEE
Confidence            5788899999999999999999999999999987543322 34567889999999999999999999887    778999


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        78 lv~e~~~~~~L~   89 (350)
T cd05573          78 LVMEYMPGGDLM   89 (350)
T ss_pred             EEEcCCCCCCHH
Confidence            999999999874

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0582|consensus

Probab=99.50  E-value=6.4e-14  Score=107.93  Aligned_cols=96  Identities=25%  Similarity=0.287  Sum_probs=84.2

Q ss_pred             hhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360           99 EEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus        99 ~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      ...++.-.+.|++...||.|.-+.||+|++..++..||+|++...+.... .+.+.+|+..|+.++||||++++-.|.  
T Consensus        18 ~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFv--   94 (516)
T KOG0582|consen   18 EKEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFV--   94 (516)
T ss_pred             cccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEE--
Confidence            34555667789999999999999999999999999999999986654443 678999999999999999999999887  


Q ss_pred             ecCCceEEEEEeccCCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLKT  199 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~~  199 (199)
                        .+..+|+||.||.+|++.+
T Consensus        95 --v~~~LWvVmpfMa~GS~ld  113 (516)
T KOG0582|consen   95 --VDSELWVVMPFMAGGSLLD  113 (516)
T ss_pred             --ecceeEEeehhhcCCcHHH
Confidence              7889999999999999753

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.50  E-value=8e-14  Score=107.66  Aligned_cols=84  Identities=25%  Similarity=0.288  Sum_probs=72.5

Q ss_pred             cceeecCc--cceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEE
Q psy360          111 FEEEIGRG--SFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLV  188 (199)
Q Consensus       111 ~~~~lG~G--~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv  188 (199)
                      +++.||+|  +|++||++.+..++..+|+|.+..........+.+.+|+.+++.++||||++++++|.    .++..++|
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~----~~~~~~lv   77 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFI----ADNELWVV   77 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE----ECCEEEEE
Confidence            56789999  7889999999999999999998755444445566788999999999999999999987    67889999


Q ss_pred             EeccCCCCCC
Q psy360          189 TELMTSGTLK  198 (199)
Q Consensus       189 ~E~~~~G~L~  198 (199)
                      |||+++|+|.
T Consensus        78 ~e~~~~~~l~   87 (327)
T cd08227          78 TSFMAYGSAK   87 (327)
T ss_pred             EeccCCCcHH
Confidence            9999999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.50  E-value=8.7e-14  Score=107.58  Aligned_cols=87  Identities=23%  Similarity=0.282  Sum_probs=75.1

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +|++.+.||+|+||.||++.+..++..+|+|.+..... .....+.+.+|+.+++.++|+||+++++++.    ..+..|
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~----~~~~~~   77 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQ----DKDNLY   77 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEe----cCCeEE
Confidence            57888999999999999999999999999999875433 2234566888999999999999999999887    678899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        78 lv~e~~~~~~L~   89 (330)
T cd05601          78 LVMEYQPGGDLL   89 (330)
T ss_pred             EEECCCCCCCHH
Confidence            999999999874

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0033|consensus

Probab=99.50  E-value=3.3e-16  Score=112.23  Aligned_cols=91  Identities=31%  Similarity=0.480  Sum_probs=81.8

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ...+.|++-+.||+|.|+.|++|.+..+|+.+|+|.+....+....-+.+.+|++|.+.|+|||||+|.....    ...
T Consensus         8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~----~~~   83 (355)
T KOG0033|consen    8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ----EES   83 (355)
T ss_pred             ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhc----ccc
Confidence            3456788899999999999999999999999999999877777767788999999999999999999998765    788


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      +.|||+|+|+||+|.
T Consensus        84 ~~ylvFe~m~G~dl~   98 (355)
T KOG0033|consen   84 FHYLVFDLVTGGELF   98 (355)
T ss_pred             eeEEEEecccchHHH
Confidence            999999999999873

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.50  E-value=4e-14  Score=111.31  Aligned_cols=91  Identities=29%  Similarity=0.373  Sum_probs=75.1

Q ss_pred             hhcccccccceeecCccceeEEEEEECC-----CCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQ-----TGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWE  176 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~-----~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~  176 (199)
                      ....++|++.+.||+|+||.||++.+..     ++..||+|.+.... .....+.+.+|+.+++.+ +|+||++++++|.
T Consensus        34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~  112 (374)
T cd05106          34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA-HTDEREALMSELKILSHLGQHKNIVNLLGACT  112 (374)
T ss_pred             cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC-CHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence            3455678999999999999999998643     33579999986432 334456788999999999 8999999999887


Q ss_pred             eeecCCceEEEEEeccCCCCCC
Q psy360          177 VTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       177 ~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                          ..+..++|||||++|+|.
T Consensus       113 ----~~~~~~lv~ey~~~g~L~  130 (374)
T cd05106         113 ----HGGPVLVITEYCCYGDLL  130 (374)
T ss_pred             ----CCCCeEEeHhhccCCcHH
Confidence                778899999999999985

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0663|consensus

Probab=99.50  E-value=1.6e-14  Score=107.65  Aligned_cols=86  Identities=24%  Similarity=0.250  Sum_probs=69.4

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|+.+++|++|.||.||+|++..++..||+|+++-..-.....-.-++||.+|.+++|||||.+......+  .-+.+|
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~--~~d~iy  153 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS--NMDKIY  153 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc--ccceee
Confidence            357888999999999999999999999999999864432111223468999999999999999998866422  456799


Q ss_pred             EEEeccCC
Q psy360          187 LVTELMTS  194 (199)
Q Consensus       187 lv~E~~~~  194 (199)
                      ||||||++
T Consensus       154 ~VMe~~Eh  161 (419)
T KOG0663|consen  154 IVMEYVEH  161 (419)
T ss_pred             eeHHHHHh
Confidence            99999985

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.49  E-value=9.8e-14  Score=106.53  Aligned_cols=80  Identities=23%  Similarity=0.309  Sum_probs=69.2

Q ss_pred             ecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEeccC
Q psy360          115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMT  193 (199)
Q Consensus       115 lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~~~  193 (199)
                      ||+|+||.||++.+..++..+|+|.+..... .......+.+|+.++.+++||||+++++++.    ..+..|+||||++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~lv~e~~~   76 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ----SPEKLYLVLAFIN   76 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe----cCCeEEEEEcCCC
Confidence            6999999999999999999999999865432 2334567889999999999999999999887    7789999999999


Q ss_pred             CCCCC
Q psy360          194 SGTLK  198 (199)
Q Consensus       194 ~G~L~  198 (199)
                      +|+|.
T Consensus        77 ~g~L~   81 (312)
T cd05585          77 GGELF   81 (312)
T ss_pred             CCcHH
Confidence            99984

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.49  E-value=2e-13  Score=116.56  Aligned_cols=95  Identities=21%  Similarity=0.367  Sum_probs=81.2

Q ss_pred             hhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      .+...+.|.+...||+|+||.||++.+..++..+++|.+............+..|+.++.+++|||||+++++|..  ..
T Consensus         8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d--e~   85 (1021)
T PTZ00266          8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN--KA   85 (1021)
T ss_pred             CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe--cC
Confidence            3455678999999999999999999999999999999987655556667789999999999999999999998752  14


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      ...+||||||+++|+|.
T Consensus        86 ~~~lyIVMEY~~gGSL~  102 (1021)
T PTZ00266         86 NQKLYILMEFCDAGDLS  102 (1021)
T ss_pred             CCEEEEEEeCCCCCcHH
Confidence            56789999999999884

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.49  E-value=5.9e-14  Score=109.13  Aligned_cols=92  Identities=26%  Similarity=0.334  Sum_probs=74.1

Q ss_pred             hhcccccccceeecCccceeEEEEEEC-----CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDT-----QTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWE  176 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~  176 (199)
                      ....++|++.+.||+|+||.||+|.+.     .++..+|+|.+.... .......+.+|+.++.++ +|+||+++++++.
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   81 (343)
T cd05103           3 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACT   81 (343)
T ss_pred             ccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence            344568999999999999999999743     456789999986432 333456788999999999 6899999999775


Q ss_pred             eeecCCceEEEEEeccCCCCCC
Q psy360          177 VTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       177 ~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      .   .....++||||+++|+|.
T Consensus        82 ~---~~~~~~lv~ey~~~g~L~  100 (343)
T cd05103          82 K---PGGPLMVIVEFCKFGNLS  100 (343)
T ss_pred             c---CCCceEEEEeccCCCcHH
Confidence            2   456789999999999985

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.49  E-value=1.9e-13  Score=105.47  Aligned_cols=82  Identities=23%  Similarity=0.320  Sum_probs=70.3

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEec
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTEL  191 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~  191 (199)
                      +.||+|+||.||++.+..++..+|+|.+..... .......+.+|+.++++++||||+++++++.    ..+..|+||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~----~~~~~~lv~e~   76 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQ----THDRLCFVMEY   76 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEE----cCCEEEEEEeC
Confidence            368999999999999999999999999875432 2234456889999999999999999999887    77899999999


Q ss_pred             cCCCCCC
Q psy360          192 MTSGTLK  198 (199)
Q Consensus       192 ~~~G~L~  198 (199)
                      +++|+|.
T Consensus        77 ~~~~~L~   83 (323)
T cd05571          77 ANGGELF   83 (323)
T ss_pred             CCCCcHH
Confidence            9999884

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.49  E-value=1.7e-13  Score=105.71  Aligned_cols=82  Identities=23%  Similarity=0.319  Sum_probs=70.0

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEec
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTEL  191 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~  191 (199)
                      +.||+|+||.||++.+..++..+|+|.+..... .......+.+|+.+++.++||||+++++++.    ..+..||||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~----~~~~~~lv~E~   76 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ----THDRLCFVMEY   76 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEe----cCCEEEEEEeC
Confidence            368999999999999999999999999875432 2234456788999999999999999999887    67889999999


Q ss_pred             cCCCCCC
Q psy360          192 MTSGTLK  198 (199)
Q Consensus       192 ~~~G~L~  198 (199)
                      +++|+|.
T Consensus        77 ~~~~~L~   83 (323)
T cd05595          77 ANGGELF   83 (323)
T ss_pred             CCCCcHH
Confidence            9999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.49  E-value=1.4e-13  Score=116.86  Aligned_cols=88  Identities=26%  Similarity=0.337  Sum_probs=76.4

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ++|++.+.||+|+||.||+|.+..++..+|+|.+..... .....+.+.+|+.++++++||||+++++++.    ..+..
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~----d~~~l   77 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICS----DGDPV   77 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEe----eCCEE
Confidence            467889999999999999999999999999999864322 2334567999999999999999999999887    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |+||||++||+|.
T Consensus        78 yLVMEY~eGGSL~   90 (932)
T PRK13184         78 YYTMPYIEGYTLK   90 (932)
T ss_pred             EEEEEcCCCCCHH
Confidence            9999999999984

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.48  E-value=2.2e-13  Score=101.44  Aligned_cols=87  Identities=26%  Similarity=0.393  Sum_probs=77.2

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      +|+..+.||+|+||.|+.+....++..+++|.+..........+.+.+|+.++++++|+||+++++++.    ..+..++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----~~~~~~~   76 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFM----DDNTLLI   76 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEe----cCCeEEE
Confidence            477889999999999999999899999999998765555666677899999999999999999999987    6788999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      +|||+++|+|.
T Consensus        77 ~~e~~~~~~L~   87 (256)
T cd08221          77 EMEYANGGTLY   87 (256)
T ss_pred             EEEecCCCcHH
Confidence            99999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG0610|consensus

Probab=99.48  E-value=4e-14  Score=108.06  Aligned_cols=70  Identities=19%  Similarity=0.282  Sum_probs=57.3

Q ss_pred             cCcceeeeeccCCCcccccccccc-cCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhccccCC
Q psy360            3 CNKSYVNIRTQRTPEFMAPEMYEE-HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAG   73 (199)
Q Consensus         3 ~~~~~~~~~~~gt~~y~ape~~~~-~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~~~~~   73 (199)
                      +..+.++...+||-.|+|||+++| .++.++|||+|||++|||+.|..||.+ .+.++.+..++......+.
T Consensus       286 ep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG-~~~~~Tl~NIv~~~l~Fp~  356 (459)
T KOG0610|consen  286 EPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKG-SNNKETLRNIVGQPLKFPE  356 (459)
T ss_pred             CCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCC-CCchhhHHHHhcCCCcCCC
Confidence            345567778999999999999995 599999999999999999999999998 4555666777766555544

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.48  E-value=1.5e-13  Score=105.83  Aligned_cols=82  Identities=24%  Similarity=0.396  Sum_probs=68.7

Q ss_pred             eeecCccceeEEEEEE---CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEE
Q psy360          113 EEIGRGSFKTVYRGLD---TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVT  189 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~---~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~  189 (199)
                      +.||+|+||.||++..   ..++..+|+|.+............+.+|+.++++++||||+++++++.    ..+..|+||
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~~lv~   77 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQ----TEGKLYLIL   77 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEE----cCCEEEEEE
Confidence            5799999999999865   357889999998754433334456788999999999999999999887    678899999


Q ss_pred             eccCCCCCC
Q psy360          190 ELMTSGTLK  198 (199)
Q Consensus       190 E~~~~G~L~  198 (199)
                      ||+++|+|.
T Consensus        78 e~~~~~~L~   86 (318)
T cd05582          78 DFLRGGDLF   86 (318)
T ss_pred             cCCCCCcHH
Confidence            999999874

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.48  E-value=3.9e-13  Score=101.51  Aligned_cols=86  Identities=26%  Similarity=0.395  Sum_probs=74.5

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      .+++.+.||+|+||.||+|.+..++..+|+|.+... ........+.+|+.++.+++||||+++++++.    ..+..++
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~l   76 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLD-ITVELQKQIMSELEILYKCDSPYIIGFYGAFF----VENRISI   76 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecC-CChHHHHHHHHHHHHHHhCCCCCeeeEEEEEE----ECCEEEE
Confidence            567889999999999999999999999999988643 23444567899999999999999999999887    6788899


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ||||+++|+|.
T Consensus        77 v~e~~~~~~l~   87 (279)
T cd06619          77 CTEFMDGGSLD   87 (279)
T ss_pred             EEecCCCCChH
Confidence            99999999874

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.48  E-value=2.7e-13  Score=104.87  Aligned_cols=82  Identities=24%  Similarity=0.345  Sum_probs=70.5

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEec
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTEL  191 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~  191 (199)
                      +.||+|+||.||++.+..++..+|+|.+..... .......+.+|+.+++.++||||+++++++.    ..+..++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----~~~~~~lv~Ey   76 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQ----TKDRLCFVMEY   76 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE----cCCEEEEEEeC
Confidence            368999999999999999999999999875432 2234567889999999999999999999887    78899999999


Q ss_pred             cCCCCCC
Q psy360          192 MTSGTLK  198 (199)
Q Consensus       192 ~~~G~L~  198 (199)
                      +++|+|.
T Consensus        77 ~~~g~L~   83 (328)
T cd05593          77 VNGGELF   83 (328)
T ss_pred             CCCCCHH
Confidence            9999884

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0605|consensus

Probab=99.48  E-value=4.6e-14  Score=110.73  Aligned_cols=62  Identities=29%  Similarity=0.471  Sum_probs=53.0

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhccccCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAG   73 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~~~~~   73 (199)
                      ..+|||.|||||++. ..|+..+|+||+|||+|||+.|-+||.. .++.+.+.+++.+......
T Consensus       347 StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s-~tp~~T~rkI~nwr~~l~f  409 (550)
T KOG0605|consen  347 STVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCS-ETPQETYRKIVNWRETLKF  409 (550)
T ss_pred             cccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHHHhhhccC
Confidence            479999999999876 5699999999999999999999999976 6778888888887654443

>KOG0588|consensus

Probab=99.48  E-value=3.6e-14  Score=114.00  Aligned_cols=89  Identities=27%  Similarity=0.477  Sum_probs=79.6

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEeccc-ccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEK-KLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .-+++++.||.|+-|.|-.|.+..||+.+|||.+... ...+.....+.+|+.+|+-+.|||+++|++.|+    .+..+
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe----~~~~l   87 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWE----NKQHL   87 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeec----cCceE
Confidence            3478899999999999999999999999999999765 444445667899999999999999999999998    88999


Q ss_pred             EEEEeccCCCCCCC
Q psy360          186 VLVTELMTSGTLKT  199 (199)
Q Consensus       186 ~lv~E~~~~G~L~~  199 (199)
                      |+|.||++||.|++
T Consensus        88 ylvlEyv~gGELFd  101 (786)
T KOG0588|consen   88 YLVLEYVPGGELFD  101 (786)
T ss_pred             EEEEEecCCchhHH
Confidence            99999999999974

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.48  E-value=2.4e-13  Score=104.92  Aligned_cols=86  Identities=21%  Similarity=0.364  Sum_probs=70.2

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHH---hcCCCCCccceeeeeeeeecCCce
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEML---KGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      |++.+.||+|+||.||++.+..++..+|+|.+..... .....+.+.+|+.++   +.++||||+++++++.    ..+.
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~----~~~~   76 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQ----TEDH   76 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEE----cCCE
Confidence            4678899999999999999999999999999875432 222345677776655   5678999999999887    7789


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .|+||||+++|+|.
T Consensus        77 ~~lv~E~~~~~~L~   90 (324)
T cd05589          77 VCFVMEYAAGGDLM   90 (324)
T ss_pred             EEEEEcCCCCCcHH
Confidence            99999999999874

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.47  E-value=2.5e-13  Score=100.96  Aligned_cols=86  Identities=24%  Similarity=0.427  Sum_probs=76.5

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLV  188 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv  188 (199)
                      |.+.+.||+|+||.||++.+..++..+++|.+..........+.+.+|+.+++.++|+||+++++++.    ..+..++|
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~lv   77 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFL----DKGKLNIV   77 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeec----cCCEEEEE
Confidence            56778999999999999999999999999998755555666778999999999999999999999887    67889999


Q ss_pred             EeccCCCCCC
Q psy360          189 TELMTSGTLK  198 (199)
Q Consensus       189 ~E~~~~G~L~  198 (199)
                      |||+++++|.
T Consensus        78 ~e~~~~~~L~   87 (256)
T cd08529          78 MEYAENGDLH   87 (256)
T ss_pred             EEeCCCCcHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.47  E-value=2.4e-13  Score=105.25  Aligned_cols=87  Identities=24%  Similarity=0.278  Sum_probs=74.3

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      .|++.+.||+|+||.||++.+..++..+|+|.+..... .......+.+|+.++..++|+||+++++++.    ..+..|
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~----~~~~~~   77 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ----DENNLY   77 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe----cCCEEE
Confidence            57888999999999999999999999999999864322 2223455888999999999999999999887    778899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        78 lv~ey~~~g~L~   89 (332)
T cd05623          78 LVMDYYVGGDLL   89 (332)
T ss_pred             EEEeccCCCcHH
Confidence            999999999985

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.46  E-value=4.2e-13  Score=99.91  Aligned_cols=86  Identities=26%  Similarity=0.391  Sum_probs=75.8

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLV  188 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv  188 (199)
                      |++.+.||+|+||.+|++....++..+++|.+............+.+|+.++++++|+||+++.+++.    ..+..++|
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~lv   77 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFE----ENGNLYIV   77 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeec----CCCeEEEE
Confidence            67889999999999999999889999999998755445555677899999999999999999999887    77899999


Q ss_pred             EeccCCCCCC
Q psy360          189 TELMTSGTLK  198 (199)
Q Consensus       189 ~E~~~~G~L~  198 (199)
                      |||+++|+|.
T Consensus        78 ~e~~~~~~l~   87 (256)
T cd08218          78 MDYCEGGDLY   87 (256)
T ss_pred             EecCCCCcHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.46  E-value=4e-13  Score=101.59  Aligned_cols=80  Identities=26%  Similarity=0.336  Sum_probs=67.9

Q ss_pred             ecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEeccC
Q psy360          115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMT  193 (199)
Q Consensus       115 lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~~~  193 (199)
                      ||+|+||+||++.+..++..+|+|.+....... ...+.+..|+.+++.++|+||+++.+++.    .....++||||++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~----~~~~~~lv~e~~~   76 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQ----TKTDLCLVMTIMN   76 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEc----CCCeEEEEEeCCC
Confidence            699999999999999999999999986543222 23356788999999999999999999887    6788999999999


Q ss_pred             CCCCC
Q psy360          194 SGTLK  198 (199)
Q Consensus       194 ~G~L~  198 (199)
                      +|+|.
T Consensus        77 ~g~L~   81 (280)
T cd05608          77 GGDLR   81 (280)
T ss_pred             CCCHH
Confidence            99984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0198|consensus

Probab=99.45  E-value=1.7e-13  Score=103.77  Aligned_cols=88  Identities=26%  Similarity=0.427  Sum_probs=73.0

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc-e
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK-Y  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~-~  184 (199)
                      ..++...+.||+|+||.||++.+..++...|+|.+...  .....+.+.+|+.+|++++|||||+++|....   ..+ .
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~--~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~---~~~~~   90 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELE--DSPTSESLEREIRILSRLNHPNIVQYYGSSSS---RENDE   90 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecc--cchhHHHHHHHHHHHHhCCCCCEEeeCCcccc---ccCee
Confidence            34577889999999999999999988999999998654  22226778999999999999999999996431   223 7


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .+|.|||+++|+|.
T Consensus        91 ~~i~mEy~~~GsL~  104 (313)
T KOG0198|consen   91 YNIFMEYAPGGSLS  104 (313)
T ss_pred             eEeeeeccCCCcHH
Confidence            89999999999985

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.45  E-value=4.8e-13  Score=103.48  Aligned_cols=82  Identities=21%  Similarity=0.321  Sum_probs=69.7

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      +.||+|+||.||++.+..++..+|+|.+....... ...+.+..|..++..+ +||||+++++++.    ..+..|||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~----~~~~~~lv~e   76 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQ----TESRLFFVIE   76 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEE----cCCEEEEEEe
Confidence            36899999999999999999999999997543322 2345688899999998 6999999999887    7788999999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+++|+|.
T Consensus        77 ~~~~g~L~   84 (329)
T cd05588          77 FVSGGDLM   84 (329)
T ss_pred             CCCCCCHH
Confidence            99999874

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.45  E-value=1.6e-13  Score=102.66  Aligned_cols=84  Identities=35%  Similarity=0.551  Sum_probs=68.2

Q ss_pred             ccceeecCccceeEEEEEEC----CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          110 KFEEEIGRGSFKTVYRGLDT----QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       110 ~~~~~lG~G~fg~v~~~~~~----~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.+.||.|.||.||+|.+.    ..+..|++|.+.. .......+.+.+|++.+++++||||++++|++.    ..+..
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~----~~~~~   76 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCI----ENEPL   76 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEE----SSSSE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeeccccccccccccccccccccc----ccccc
Confidence            45688999999999999877    4567799999854 334455788999999999999999999999987    66779


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        77 ~lv~e~~~~g~L~   89 (259)
T PF07714_consen   77 FLVMEYCPGGSLD   89 (259)
T ss_dssp             EEEEE--TTEBHH
T ss_pred             ccccccccccccc
Confidence            9999999999884

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.45  E-value=3.6e-13  Score=101.00  Aligned_cols=87  Identities=32%  Similarity=0.501  Sum_probs=72.2

Q ss_pred             cccccceeecCccceeEEEEEECCC---CcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQT---GVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ++|++.+.||+|+||.||+|.+..+   ...+++|.+... ......+.+.+|+.++.+++||||+++++++.    .++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~   78 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT----KSK   78 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe----cCC
Confidence            5678899999999999999987543   347888887543 23445677899999999999999999999887    678


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus        79 ~~~lv~e~~~~~~L~   93 (267)
T cd05066          79 PVMIVTEYMENGSLD   93 (267)
T ss_pred             ccEEEEEcCCCCCHH
Confidence            899999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.45  E-value=5e-13  Score=103.16  Aligned_cols=82  Identities=23%  Similarity=0.303  Sum_probs=69.8

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEec
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTEL  191 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~  191 (199)
                      +.||+|+||.||++.+..++..+|+|.+...... ......+..|+.++..++||||+++.+++.    ..+..||||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~----~~~~~~lv~E~   76 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ----THDRLCFVMEY   76 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEE----cCCEEEEEEeC
Confidence            3689999999999999999999999998654322 233456788999999999999999999887    77899999999


Q ss_pred             cCCCCCC
Q psy360          192 MTSGTLK  198 (199)
Q Consensus       192 ~~~G~L~  198 (199)
                      +++|+|.
T Consensus        77 ~~~~~L~   83 (325)
T cd05594          77 ANGGELF   83 (325)
T ss_pred             CCCCcHH
Confidence            9999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.45  E-value=3.5e-13  Score=100.11  Aligned_cols=81  Identities=36%  Similarity=0.545  Sum_probs=69.8

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEecc
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELM  192 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~~  192 (199)
                      +.||+|+||.||++.+..++..+++|.+... ........+.+|+.++++++|+||+++++++.    .....++||||+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~lv~e~~   75 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCT----QKQPIYIVMELV   75 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEc----CCCCeEEEEeec
Confidence            3689999999999999889999999987532 33445567999999999999999999999887    677899999999


Q ss_pred             CCCCCC
Q psy360          193 TSGTLK  198 (199)
Q Consensus       193 ~~G~L~  198 (199)
                      ++|+|.
T Consensus        76 ~~~~L~   81 (252)
T cd05084          76 QGGDFL   81 (252)
T ss_pred             cCCcHH
Confidence            999875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.45  E-value=2.9e-13  Score=102.41  Aligned_cols=86  Identities=28%  Similarity=0.507  Sum_probs=75.0

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      .|++.+.||+|+||.||++.+..++..+++|.+... ........+.+|+.++.+++|+||+++++++.    ..+..++
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~----~~~~~~l   76 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE-LDESKFNQIIMELDILHKAVSPYIVDFYGAFF----IEGAVYM   76 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc-cCHHHHHHHHHHHHHHHhcCCCcHHhhhhhee----cCCeEEE
Confidence            578889999999999999999989999999988533 34445567899999999999999999999887    6789999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ||||+++|+|.
T Consensus        77 v~e~~~~~~l~   87 (286)
T cd06622          77 CMEYMDAGSLD   87 (286)
T ss_pred             EEeecCCCCHH
Confidence            99999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.45  E-value=3.7e-13  Score=102.09  Aligned_cols=92  Identities=33%  Similarity=0.473  Sum_probs=74.0

Q ss_pred             hhhcccccccceeecCccceeEEEEEECC-----CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeee
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQ-----TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWE  176 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~-----~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  176 (199)
                      |+...+.|++.+.||+|+||.||+|....     .+..+|+|.+.... .......+.+|+.+++.++|+||+++++++.
T Consensus         1 ~~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   79 (288)
T cd05061           1 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVS   79 (288)
T ss_pred             CcccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence            34556788999999999999999986542     34578999875332 2333456888999999999999999999887


Q ss_pred             eeecCCceEEEEEeccCCCCCC
Q psy360          177 VTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       177 ~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                          ..+..++||||+++|+|.
T Consensus        80 ----~~~~~~lv~e~~~~g~L~   97 (288)
T cd05061          80 ----KGQPTLVVMELMAHGDLK   97 (288)
T ss_pred             ----CCCCcEEEEeCCCCCCHH
Confidence                667889999999999985

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.45  E-value=3.1e-13  Score=101.95  Aligned_cols=87  Identities=26%  Similarity=0.435  Sum_probs=76.0

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .++|++.+.||+|+||.||++.+..++..+++|.+...  .....+.+.+|+.++++++|+||+++++++.    .+...
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~   77 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYF----YENKL   77 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEe----cCCeE
Confidence            45689999999999999999999888999999988532  3445567889999999999999999999887    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |+||||+++|+|.
T Consensus        78 ~lv~e~~~~~~L~   90 (280)
T cd06611          78 WILIEFCDGGALD   90 (280)
T ss_pred             EEEeeccCCCcHH
Confidence            9999999999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.44  E-value=8.1e-13  Score=98.96  Aligned_cols=88  Identities=28%  Similarity=0.477  Sum_probs=75.3

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccc-cCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK-LNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ++|++.+.||+|+||.||+|.+..++..+++|.+.... ........+.+|+.+++.++||||+++++++.    ..+..
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~   77 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFI----EDNEL   77 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEE----ECCeE
Confidence            46788999999999999999999999999999875422 23444567899999999999999999999887    67789


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        78 ~~v~e~~~~~~L~   90 (267)
T cd08228          78 NIVLELADAGDLS   90 (267)
T ss_pred             EEEEEecCCCcHH
Confidence            9999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.44  E-value=5.5e-13  Score=101.26  Aligned_cols=88  Identities=25%  Similarity=0.404  Sum_probs=75.5

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ++|++.+.||+|+||.||++.+..++..+++|.+..... .....+.+.+|+.++++++||||+++++++.    ..+..
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~   76 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQ----DDSNL   76 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEE----cCCeE
Confidence            357888999999999999999999999999998864332 2234567889999999999999999999887    77889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        77 ~~v~e~~~~~~L~   89 (290)
T cd05580          77 YLVMEYVPGGELF   89 (290)
T ss_pred             EEEEecCCCCCHH
Confidence            9999999999884

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.44  E-value=5.8e-13  Score=99.03  Aligned_cols=87  Identities=28%  Similarity=0.400  Sum_probs=76.4

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      +|+..+.||+|+||.||++.+..++..+++|.+..........+.+.+|+.++++++|+||+++++.+.    ..+..++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~----~~~~~~l   76 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFL----EDKALMI   76 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEe----cCCEEEE
Confidence            367789999999999999999889999999998765555556678999999999999999999999876    6788999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ||||+++|+|.
T Consensus        77 v~e~~~~~~L~   87 (256)
T cd08220          77 VMEYAPGGTLA   87 (256)
T ss_pred             EEecCCCCCHH
Confidence            99999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.44  E-value=7e-13  Score=99.18  Aligned_cols=88  Identities=30%  Similarity=0.537  Sum_probs=75.8

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      +.|++.+.||+|+||.||++.+..++..+++|.+..... .....+.+.+|+.++++++|+||+++++++.    ..+..
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~----~~~~~   77 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI----ENNEL   77 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee----cCCeE
Confidence            468889999999999999999998999999998864332 2334677999999999999999999999887    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        78 ~lv~e~~~~~~L~   90 (267)
T cd08224          78 NIVLELADAGDLS   90 (267)
T ss_pred             EEEEecCCCCCHH
Confidence            9999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.44  E-value=5.1e-13  Score=101.11  Aligned_cols=87  Identities=24%  Similarity=0.356  Sum_probs=75.3

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.+.||+|+||.||++.+..++..+++|.+.... .....+.+.+|+.+++.++|+||+++++++.    ..+..+
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----~~~~~~   79 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFL----NENNIC   79 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEe----cCCEEE
Confidence            56888999999999999999999899999999875432 2334567899999999999999999999887    678899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        80 lv~e~~~~~~L~   91 (284)
T cd06620          80 MCMEFMDCGSLD   91 (284)
T ss_pred             EEEecCCCCCHH
Confidence            999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.44  E-value=4.7e-13  Score=100.29  Aligned_cols=87  Identities=22%  Similarity=0.385  Sum_probs=74.2

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.|++.+.||+|+||.||+|.+..++..+++|.+....  ......+.+|+.++++++|+||+++++++.    ..+..
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~----~~~~~   81 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP--GDDFSLIQQEIFMVKECKHCNIVAYFGSYL----SREKL   81 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc--cchHHHHHHHHHHHHhcCCCCeeeeeEEEE----eCCEE
Confidence            356899999999999999999998999999999885432  123345778999999999999999999887    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        82 ~iv~e~~~~~~L~   94 (267)
T cd06646          82 WICMEYCGGGSLQ   94 (267)
T ss_pred             EEEEeCCCCCcHH
Confidence            9999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.44  E-value=6e-13  Score=100.88  Aligned_cols=86  Identities=26%  Similarity=0.353  Sum_probs=72.7

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      |+..+.||+|+||.||++.+..++..+|+|.+........ ....+.+|+.++++++|+|++++.+.+.    ..+..++
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~----~~~~~~l   77 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYE----TKDALCL   77 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEe----cCCEEEE
Confidence            5667889999999999999999999999999865433222 2345778999999999999999999887    6788999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ||||+++|+|.
T Consensus        78 v~e~~~g~~L~   88 (285)
T cd05630          78 VLTLMNGGDLK   88 (285)
T ss_pred             EEEecCCCcHH
Confidence            99999999884

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.44  E-value=5.9e-13  Score=99.73  Aligned_cols=88  Identities=31%  Similarity=0.507  Sum_probs=73.1

Q ss_pred             ccccccceeecCccceeEEEEEECCC---CcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQT---GVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      .++|++.+.||+|+||.||+|.+...   ...+++|.+... ........+.+|+.++.+++|+||+++++++.    ..
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~   77 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAG-SSDKQRLDFLTEASIMGQFDHPNIIRLEGVVT----KS   77 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCC-CChHHHHHHHHHHHHHHhCCCCCcceEeEEEe----cC
Confidence            35688899999999999999987543   567899987543 23445567899999999999999999999887    67


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..++||||+++|+|.
T Consensus        78 ~~~~iv~e~~~~~~L~   93 (266)
T cd05033          78 RPVMIITEYMENGSLD   93 (266)
T ss_pred             CceEEEEEcCCCCCHH
Confidence            7899999999999885

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.44  E-value=3.3e-13  Score=102.70  Aligned_cols=88  Identities=28%  Similarity=0.449  Sum_probs=72.7

Q ss_pred             ccccccceeecCccceeEEEEEECCC--------------CcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccce
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQT--------------GVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSF  171 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~--------------~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l  171 (199)
                      .++|++.+.||+|+||.||++.+..+              ...+|+|.+... ......+.+.+|++++++++|+||+++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~   82 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFLKEIKIMSRLKNPNIIRL   82 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence            45788999999999999999876432              345889888643 344456679999999999999999999


Q ss_pred             eeeeeeeecCCceEEEEEeccCCCCCC
Q psy360          172 YGYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       172 ~~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++++.    ..+..++||||+++|+|.
T Consensus        83 ~~~~~----~~~~~~lv~e~~~~~~L~  105 (295)
T cd05097          83 LGVCV----SDDPLCMITEYMENGDLN  105 (295)
T ss_pred             EEEEc----CCCccEEEEecCCCCcHH
Confidence            99887    678899999999999874

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.44  E-value=4.7e-13  Score=100.87  Aligned_cols=91  Identities=31%  Similarity=0.486  Sum_probs=74.2

Q ss_pred             hhcccccccceeecCccceeEEEEEECC-----CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQ-----TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEV  177 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~-----~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  177 (199)
                      ....++|++.+.||+|+||.||+|.+.+     ++..+|+|.+... ........+.+|+.+++.++|+||+++++++. 
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~-   79 (277)
T cd05062           2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVS-   79 (277)
T ss_pred             cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc-
Confidence            3456789999999999999999987642     3567999987532 22334566889999999999999999999886 


Q ss_pred             eecCCceEEEEEeccCCCCCC
Q psy360          178 TLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~~~~~~~~lv~E~~~~G~L~  198 (199)
                         .....++||||+++|+|.
T Consensus        80 ---~~~~~~lv~e~~~~~~L~   97 (277)
T cd05062          80 ---QGQPTLVIMELMTRGDLK   97 (277)
T ss_pred             ---CCCCeEEEEecCCCCCHH
Confidence               677899999999999884

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG0201|consensus

Probab=99.43  E-value=3.6e-14  Score=108.95  Aligned_cols=88  Identities=27%  Similarity=0.412  Sum_probs=76.6

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ..|.....||+|+||.||+|.+..+++.||+|.+.... ...+.+++.+|+.++.+++++||.++++.+.    .+..++
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~-~~deIediqqei~~Ls~~~~~~it~yygsyl----~g~~Lw   87 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE-AEDEIEDIQQEISVLSQCDSPNITEYYGSYL----KGTKLW   87 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhh-cchhhHHHHHHHHHHHhcCcchHHhhhhhee----ecccHH
Confidence            34666789999999999999999999999999997543 3345678999999999999999999999887    788899


Q ss_pred             EEEeccCCCCCCC
Q psy360          187 LVTELMTSGTLKT  199 (199)
Q Consensus       187 lv~E~~~~G~L~~  199 (199)
                      ++||||.||++.+
T Consensus        88 iiMey~~gGsv~~  100 (467)
T KOG0201|consen   88 IIMEYCGGGSVLD  100 (467)
T ss_pred             HHHHHhcCcchhh
Confidence            9999999998753

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.43  E-value=3.7e-13  Score=100.23  Aligned_cols=86  Identities=28%  Similarity=0.560  Sum_probs=74.0

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLV  188 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv  188 (199)
                      |++.+.||+|+||.||++.+..++..+|+|.+..............+|+.++.+++|+||+++++++.    .....++|
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~----~~~~~~~v   76 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQ----DDNYLYIV   76 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEE----ESSEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccc----cccccccc
Confidence            57789999999999999999999999999999765444444445567999999999999999999987    68889999


Q ss_pred             EeccCCCCCC
Q psy360          189 TELMTSGTLK  198 (199)
Q Consensus       189 ~E~~~~G~L~  198 (199)
                      |||+++|+|.
T Consensus        77 ~~~~~~~~L~   86 (260)
T PF00069_consen   77 MEYCPGGSLQ   86 (260)
T ss_dssp             EEEETTEBHH
T ss_pred             cccccccccc
Confidence            9999998874

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.43  E-value=9.1e-13  Score=106.84  Aligned_cols=86  Identities=16%  Similarity=0.202  Sum_probs=72.2

Q ss_pred             cccccceeecCccceeEEEEEECCC-CcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQT-GVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~-~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ..|.+.+.||+|+||.||++....+ +..+++|.+...  .......+.+|+.+++.++||||+++++++.    ..+..
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~----~~~~~  140 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFK----SDDKL  140 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE----ECCEE
Confidence            3488899999999999999987766 677888876432  3334456788999999999999999999987    67899


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ||||||++||+|.
T Consensus       141 ~lv~E~~~gg~L~  153 (478)
T PTZ00267        141 LLIMEYGSGGDLN  153 (478)
T ss_pred             EEEEECCCCCCHH
Confidence            9999999999984

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.43  E-value=7.7e-13  Score=99.86  Aligned_cols=80  Identities=31%  Similarity=0.410  Sum_probs=67.3

Q ss_pred             ecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEeccC
Q psy360          115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMT  193 (199)
Q Consensus       115 lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~~~  193 (199)
                      ||+|+||.||++.+..++..+|+|.+........ ....+..|+.++++++||||+++++++.    .+...++||||++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~----~~~~~~lv~e~~~   76 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFE----SKTHLCLVMSLMN   76 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEe----cCCeEEEEEecCC
Confidence            6999999999999999999999999865433222 2344567999999999999999999887    6788999999999


Q ss_pred             CCCCC
Q psy360          194 SGTLK  198 (199)
Q Consensus       194 ~G~L~  198 (199)
                      ||+|.
T Consensus        77 g~~L~   81 (277)
T cd05607          77 GGDLK   81 (277)
T ss_pred             CCCHH
Confidence            99884

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0592|consensus

Probab=99.43  E-value=9.5e-14  Score=109.22  Aligned_cols=90  Identities=28%  Similarity=0.382  Sum_probs=78.8

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  182 (199)
                      ...+|.+++.||.|+|++|++|++..++..+|+|.+.++.+..+ ..+-..+|-.+|.+| .||.|++|+-.|.    +.
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQ----D~  146 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQ----DE  146 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEee----cc
Confidence            34679999999999999999999999999999999987655433 345677899999999 7999999999998    78


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ..+|+|+||+++|+|.
T Consensus       147 ~sLYFvLe~A~nGdll  162 (604)
T KOG0592|consen  147 ESLYFVLEYAPNGDLL  162 (604)
T ss_pred             cceEEEEEecCCCcHH
Confidence            8999999999999985

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.43  E-value=4.6e-13  Score=99.81  Aligned_cols=87  Identities=22%  Similarity=0.352  Sum_probs=75.2

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +|++.+.||+|+||.||++.+..++..+++|.+....... ...+.+.+|+.++++++||||+++++++.    .....+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~   76 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQ----DEENMY   76 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhc----CCCeEE
Confidence            3678899999999999999998899999999986543322 34577999999999999999999999887    778899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+.+++|.
T Consensus        77 lv~e~~~~~~L~   88 (258)
T cd05578          77 LVVDLLLGGDLR   88 (258)
T ss_pred             EEEeCCCCCCHH
Confidence            999999999874

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.42  E-value=4.8e-13  Score=101.53  Aligned_cols=85  Identities=26%  Similarity=0.372  Sum_probs=71.1

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.+.||+|+||.||+|.+..++..+|+|.+..... ......+.+|+.++++++|+||+++++++.    ..+..+
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~~   79 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDIIH----TERCLT   79 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc-CCcchhHHHHHHHHHhCCCCCEeeEEEEEc----CCCeEE
Confidence            457888999999999999999999999999998864321 122345778999999999999999999887    677899


Q ss_pred             EEEeccCCCCC
Q psy360          187 LVTELMTSGTL  197 (199)
Q Consensus       187 lv~E~~~~G~L  197 (199)
                      +||||+++ +|
T Consensus        80 lv~e~~~~-~l   89 (288)
T cd07871          80 LVFEYLDS-DL   89 (288)
T ss_pred             EEEeCCCc-CH
Confidence            99999985 55

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.42  E-value=4.6e-13  Score=99.61  Aligned_cols=87  Identities=24%  Similarity=0.434  Sum_probs=75.1

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      +|++.+.||+|+||.||++.+..++..+++|.+..........+.+.+|+.+++.++|+||+++++.+.    .....++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~----~~~~~~l   76 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQ----ENGRLFI   76 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheec----cCCeEEE
Confidence            367789999999999999999999999999998654444445567889999999999999999999887    6788999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      |+||+++++|.
T Consensus        77 v~e~~~~~~L~   87 (257)
T cd08225          77 VMEYCDGGDLM   87 (257)
T ss_pred             EEecCCCCcHH
Confidence            99999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.42  E-value=1.4e-12  Score=98.39  Aligned_cols=87  Identities=24%  Similarity=0.439  Sum_probs=73.8

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +-|+..+.||+|+||.||+|.+..++..+|+|.+.... .....+.+.+|+.++.+++|+||+++++++.    .++..+
T Consensus         4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----~~~~~~   78 (277)
T cd06641           4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYL----KDTKLW   78 (277)
T ss_pred             HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHHHhcCCCCEeEEEEEEE----eCCeEE
Confidence            34677889999999999999988889999999875332 2334567889999999999999999999887    678899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        79 lv~e~~~~~~l~   90 (277)
T cd06641          79 IIMEYLGGGSAL   90 (277)
T ss_pred             EEEEeCCCCcHH
Confidence            999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG4721|consensus

Probab=99.42  E-value=2.3e-14  Score=113.59  Aligned_cols=49  Identities=35%  Similarity=0.599  Sum_probs=43.6

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      ..+.++||..|||||+++ ...+.|+||||||||||||+||..||.+...
T Consensus       267 TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds  316 (904)
T KOG4721|consen  267 TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS  316 (904)
T ss_pred             hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch
Confidence            345789999999999998 5699999999999999999999999986543

>KOG0584|consensus

Probab=99.42  E-value=5.4e-14  Score=112.14  Aligned_cols=97  Identities=44%  Similarity=0.833  Sum_probs=81.6

Q ss_pred             hhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH--HHHHHHHHHHHHHhcCCCCCccceeeeeee
Q psy360          100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK--AERARFREEAEMLKGLQHPNIVSFYGYWEV  177 (199)
Q Consensus       100 ~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  177 (199)
                      .+.....++.++...||+|+|-+||+|.+..+|.+|||-.++-..+.+  ...++|..|+.+|+.|+|+||++++.+|.+
T Consensus        33 ve~~p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d  112 (632)
T KOG0584|consen   33 VEKDPTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVD  112 (632)
T ss_pred             cccCCCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheec
Confidence            344455678899999999999999999999999999998776554433  345899999999999999999999998873


Q ss_pred             eecCCceEEEEEeccCCCCCC
Q psy360          178 TLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      .  .+..+-+|+|.|+.|+|+
T Consensus       113 ~--~n~~in~iTEL~TSGtLr  131 (632)
T KOG0584|consen  113 T--DNKTINFITELFTSGTLR  131 (632)
T ss_pred             C--CCceeeeeeecccCCcHH
Confidence            2  456789999999999985

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.42  E-value=3.4e-13  Score=100.64  Aligned_cols=88  Identities=28%  Similarity=0.469  Sum_probs=74.7

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      .....|++.+.||+|+||.||++.+.. +..+++|.+...  .....+.+..|+.+++.++|+||+++++++.    ..+
T Consensus         3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~   75 (261)
T cd05148           3 RPREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSD--DLLKQQDFQKEVQALKRLRHKHLISLFAVCS----VGE   75 (261)
T ss_pred             CcHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEecccc--chhhHHHHHHHHHHHhcCCCcchhheeeeEe----cCC
Confidence            345678999999999999999999877 788999988543  2334566889999999999999999999887    678


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus        76 ~~~lv~e~~~~~~L~   90 (261)
T cd05148          76 PVYIITELMEKGSLL   90 (261)
T ss_pred             CeEEEEeecccCCHH
Confidence            899999999999885

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.42  E-value=7.6e-13  Score=100.07  Aligned_cols=87  Identities=28%  Similarity=0.494  Sum_probs=72.0

Q ss_pred             cccccceeecCccceeEEEEEEC----CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDT----QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~----~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      +.+++.+.||+|+||.||+|.+.    ..+..+++|.+... ........+.+|+.++++++|+||+++++++.    ..
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~   79 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDI-NNPQQWGEFQQEASLMAELHHPNIVCLLGVVT----QE   79 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCC-CCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe----cC
Confidence            46788899999999999999753    35578999988643 23344567889999999999999999999887    67


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..|+||||+++|+|.
T Consensus        80 ~~~~lv~e~~~~~~L~   95 (283)
T cd05090          80 QPVCMLFEYLNQGDLH   95 (283)
T ss_pred             CceEEEEEcCCCCcHH
Confidence            7899999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.42  E-value=1.3e-12  Score=99.04  Aligned_cols=86  Identities=23%  Similarity=0.343  Sum_probs=72.5

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      |+..+.||+|+||+||++.+..++..+|+|.+........ ....+.+|+.+++.++|+||+++.+++.    .++..++
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~----~~~~~~l   77 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYE----TKDALCL   77 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEe----cCCEEEE
Confidence            4567889999999999999999999999999865433222 2355788999999999999999998887    6788999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ||||+++|+|.
T Consensus        78 v~e~~~~~~L~   88 (285)
T cd05632          78 VLTIMNGGDLK   88 (285)
T ss_pred             EEEeccCccHH
Confidence            99999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.42  E-value=7.9e-13  Score=99.19  Aligned_cols=87  Identities=33%  Similarity=0.527  Sum_probs=73.1

Q ss_pred             cccccceeecCccceeEEEEEECCCCc---EEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGV---AVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~---~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..+++.+.||+|+||.||+|.+..++.   .+++|.+... ......+.|..|+.++++++||||+++++++.    ...
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~----~~~   78 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT----KSR   78 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCcCcceEEEEEC----CCC
Confidence            357888999999999999998776554   6999988643 24455678999999999999999999999887    677


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus        79 ~~~lv~e~~~~~~L~   93 (269)
T cd05065          79 PVMIITEFMENGALD   93 (269)
T ss_pred             ceEEEEecCCCCcHH
Confidence            889999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG4257|consensus

Probab=99.42  E-value=2.1e-13  Score=109.30  Aligned_cols=89  Identities=27%  Similarity=0.485  Sum_probs=72.2

Q ss_pred             hcccccccceeecCccceeEEEEEEC----CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDT----QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~----~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      ..++...+.+.||.|.||.||+|.+.    +....||+|..+.. ...+..+.|..|+.+|++++||||++|+|.|.   
T Consensus       386 l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d-~t~d~tekflqEa~iMrnfdHphIikLIGv~~---  461 (974)
T KOG4257|consen  386 LRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTD-CTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV---  461 (974)
T ss_pred             eehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccC-CChhhHHHHHHHHHHHHhCCCcchhheeeeee---
Confidence            33445666788999999999999753    34567888877543 34455788999999999999999999999984   


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                        ..+.|||||+++-|.|+
T Consensus       462 --e~P~WivmEL~~~GELr  478 (974)
T KOG4257|consen  462 --EQPMWIVMELAPLGELR  478 (974)
T ss_pred             --ccceeEEEecccchhHH
Confidence              67899999999999885

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.42  E-value=4e-13  Score=101.61  Aligned_cols=87  Identities=26%  Similarity=0.341  Sum_probs=74.2

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      .|++.+.||+|+||.||+|.+..++..+++|.+..........+.+.+|+.+++.++|+||+++++++.    ..+..++
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~l   77 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFR----RKKRLYL   77 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcc----cCCeEEE
Confidence            577889999999999999999888999999987654333334566889999999999999999999887    7788999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ||||+++++|.
T Consensus        78 v~e~~~~~~l~   88 (286)
T cd07846          78 VFEFVDHTVLD   88 (286)
T ss_pred             EEecCCccHHH
Confidence            99999988653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.42  E-value=1.1e-12  Score=100.35  Aligned_cols=87  Identities=18%  Similarity=0.293  Sum_probs=74.9

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +|++.+.||+|+||.||++.+..++..+++|.+...... ....+.+.+|+.+++.++|+||+++++.+.    .++..+
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~----~~~~~~   77 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE----TKRHLC   77 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe----cCCEEE
Confidence            578889999999999999999999999999988654322 234567889999999999999999999887    778899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||++||+|.
T Consensus        78 lv~e~~~g~~L~   89 (305)
T cd05609          78 MVMEYVEGGDCA   89 (305)
T ss_pred             EEEecCCCCcHH
Confidence            999999999885

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>PHA02988 hypothetical protein; Provisional

Probab=99.42  E-value=7.8e-13  Score=100.22  Aligned_cols=84  Identities=18%  Similarity=0.246  Sum_probs=67.4

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEec
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTEL  191 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~  191 (199)
                      ..||+|++|.||+|.+  ++..+|+|.+....... ...+.+.+|+.++++++||||+++++++.+........++||||
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey  103 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY  103 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence            5789999999999987  57789999986543222 23467889999999999999999999886322234678999999


Q ss_pred             cCCCCCC
Q psy360          192 MTSGTLK  198 (199)
Q Consensus       192 ~~~G~L~  198 (199)
                      +++|+|.
T Consensus       104 ~~~g~L~  110 (283)
T PHA02988        104 CTRGYLR  110 (283)
T ss_pred             CCCCcHH
Confidence            9999985

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.42  E-value=1.3e-12  Score=97.62  Aligned_cols=88  Identities=27%  Similarity=0.421  Sum_probs=74.9

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH---HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK---AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ++|++.+.||+|+||.||++.+..++..+++|.+.......   ...+.+.+|+.++++++||||+++++++.    ..+
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~   77 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLR----DDE   77 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEc----cCC
Confidence            46788999999999999999998899999999886433222   23457889999999999999999999987    677


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus        78 ~~~~v~e~~~~~~l~   92 (263)
T cd06625          78 TLSIFMEYMPGGSVK   92 (263)
T ss_pred             eEEEEEEECCCCcHH
Confidence            999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.42  E-value=6.9e-13  Score=102.31  Aligned_cols=82  Identities=22%  Similarity=0.404  Sum_probs=67.5

Q ss_pred             eeecCccceeEEEEEEC---CCCcEEEEEEecccccC--HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          113 EEIGRGSFKTVYRGLDT---QTGVAVAWCELQEKKLN--KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~---~~~~~~a~k~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      +.||+|+||.||++...   .++..+|+|.+......  ......+..|+.+++.++||||+++++++.    .++..|+
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~----~~~~~~l   77 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQ----TGGKLYL   77 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEe----cCCeEEE
Confidence            67999999999999753   46889999998654321  223355788999999999999999999887    6788999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ||||+++|+|.
T Consensus        78 v~e~~~~~~L~   88 (323)
T cd05584          78 ILEYLSGGELF   88 (323)
T ss_pred             EEeCCCCchHH
Confidence            99999999874

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.42  E-value=1.3e-12  Score=101.03  Aligned_cols=82  Identities=20%  Similarity=0.302  Sum_probs=68.8

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      +.||+|+||.||++.+..++..+|+|.+..... .....+.+..|+.++.++ +||||+++++++.    ..+..|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~----~~~~~~lv~E   76 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ----TESRLFFVIE   76 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEE----eCCEEEEEEe
Confidence            368999999999999999999999999875432 223445677888888877 7999999999887    6788999999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+++|+|.
T Consensus        77 ~~~~~~L~   84 (329)
T cd05618          77 YVNGGDLM   84 (329)
T ss_pred             CCCCCCHH
Confidence            99999874

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0578|consensus

Probab=99.42  E-value=1.5e-13  Score=108.50  Aligned_cols=89  Identities=26%  Similarity=0.357  Sum_probs=76.4

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      .+..|.....||+|+-|.||.+....++..||+|.+....  +...+.+.+|+.+|+..+|+|||++++.|.    ..+.
T Consensus       271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~--Q~~keLilnEi~Vm~~~~H~NiVnfl~Syl----v~de  344 (550)
T KOG0578|consen  271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK--QPKKELLLNEILVMRDLHHPNIVNFLDSYL----VGDE  344 (550)
T ss_pred             hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEecc--CCchhhhHHHHHHHHhccchHHHHHHHHhc----ccce
Confidence            3456777889999999999999999999999999986543  333466889999999999999999999765    6689


Q ss_pred             EEEEEeccCCCCCCC
Q psy360          185 IVLVTELMTSGTLKT  199 (199)
Q Consensus       185 ~~lv~E~~~~G~L~~  199 (199)
                      +|+|||||+||+|.|
T Consensus       345 LWVVMEym~ggsLTD  359 (550)
T KOG0578|consen  345 LWVVMEYMEGGSLTD  359 (550)
T ss_pred             eEEEEeecCCCchhh
Confidence            999999999999864

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.41  E-value=1.5e-12  Score=98.88  Aligned_cols=87  Identities=24%  Similarity=0.395  Sum_probs=76.1

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.|++.+.||+|+||.||++.+..++..+++|.+...  .....+.+.+|+.+++.++|+||+++++++.    .+...
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~   84 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFY----WDGKL   84 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE----eCCeE
Confidence            46789999999999999999999999999999998543  4445677889999999999999999999887    66789


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        85 ~lv~e~~~~~~l~   97 (292)
T cd06644          85 WIMIEFCPGGAVD   97 (292)
T ss_pred             EEEEecCCCCcHH
Confidence            9999999999873

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.41  E-value=1.3e-12  Score=100.80  Aligned_cols=87  Identities=18%  Similarity=0.206  Sum_probs=72.0

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCC-CCccceeeeeeeeecCCceE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQH-PNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~~~~  185 (199)
                      .|++.+.||+|+||.||+|.+..++..+|+|.+..... .....+.+..|+.++..+.| ++|+++++++.    ..+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~----~~~~~   76 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ----TMDRL   76 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEE----cCCEE
Confidence            36788999999999999999999999999999875432 22345668889999999976 56788888877    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |+||||+++|+|.
T Consensus        77 ~lv~E~~~~g~L~   89 (324)
T cd05587          77 YFVMEYVNGGDLM   89 (324)
T ss_pred             EEEEcCCCCCcHH
Confidence            9999999999984

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.41  E-value=2.1e-12  Score=96.07  Aligned_cols=85  Identities=26%  Similarity=0.345  Sum_probs=73.4

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLV  188 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv  188 (199)
                      |++.+.||+|+||.||++.+..++..+++|.+.... .....+.+.+|+.+++.++|+||+++++++.    ..+..|+|
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~lv   76 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK-SSSAVEDSRKEAVLLAKMKHPNIVAFKESFE----ADGHLYIV   76 (255)
T ss_pred             ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc-chHHHHHHHHHHHHHHhCCCCCcceEEEEEE----ECCEEEEE
Confidence            677899999999999999999999999999885332 2334567888999999999999999999887    67899999


Q ss_pred             EeccCCCCCC
Q psy360          189 TELMTSGTLK  198 (199)
Q Consensus       189 ~E~~~~G~L~  198 (199)
                      |||+++|+|.
T Consensus        77 ~e~~~~~~l~   86 (255)
T cd08219          77 MEYCDGGDLM   86 (255)
T ss_pred             EeeCCCCcHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.41  E-value=1.2e-12  Score=97.64  Aligned_cols=88  Identities=28%  Similarity=0.501  Sum_probs=75.2

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLV  188 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv  188 (199)
                      |++.+.||+|+||.||++.+..++..+++|.+..........+.+..|+.++++++|+||+++++++..  ......+++
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~~~~   79 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID--RSNQTLYIV   79 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec--CCCCEEEEE
Confidence            677899999999999999999999999999987655566667789999999999999999999997642  135678999


Q ss_pred             EeccCCCCCC
Q psy360          189 TELMTSGTLK  198 (199)
Q Consensus       189 ~E~~~~G~L~  198 (199)
                      |||+++|+|.
T Consensus        80 ~e~~~~~~L~   89 (265)
T cd08217          80 MEYCEGGDLA   89 (265)
T ss_pred             ehhccCCCHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.41  E-value=8.8e-13  Score=99.66  Aligned_cols=88  Identities=26%  Similarity=0.375  Sum_probs=73.8

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ++|+....||+|+||.||++.+..++..+++|.+..........+.+.+|+.++++++|+||+++++++.    .....+
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----~~~~~~   76 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFR----RKRKLH   76 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEe----eCCEEE
Confidence            3578889999999999999999989999999988644322223456789999999999999999999887    678899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++++|.
T Consensus        77 ~v~e~~~~~~l~   88 (286)
T cd07847          77 LVFEYCDHTVLN   88 (286)
T ss_pred             EEEeccCccHHH
Confidence            999999988653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.41  E-value=1.4e-12  Score=98.94  Aligned_cols=88  Identities=22%  Similarity=0.267  Sum_probs=73.4

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      .|...+.||.|++|.||++.+..++..+++|.+.... .......+.+|++++++++|+||++++++|..  ...+..++
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~~~l   78 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP-NPDLQKQILRELEINKSCKSPYIVKYYGAFLD--ESSSSIGI   78 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC-chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEc--cCCCeEEE
Confidence            4677899999999999999998899999999886432 23445678999999999999999999998752  13457899


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ||||+++|+|.
T Consensus        79 v~e~~~~~~L~   89 (287)
T cd06621          79 AMEYCEGGSLD   89 (287)
T ss_pred             EEEecCCCCHH
Confidence            99999999874

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.41  E-value=1.3e-12  Score=100.77  Aligned_cols=82  Identities=28%  Similarity=0.379  Sum_probs=66.2

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHH-HHHhcCCCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEA-EMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      +.||+|+||.||++.+..++..+|+|.+...... ......+..|. .+++.++|+||+++++++.    ..+..|+|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~----~~~~~~lv~e   76 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQ----TAEKLYFVLD   76 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEE----cCCEEEEEEc
Confidence            3689999999999999999999999998654322 22334455555 4678899999999999887    7789999999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+++|+|.
T Consensus        77 ~~~~~~L~   84 (321)
T cd05603          77 YVNGGELF   84 (321)
T ss_pred             CCCCCCHH
Confidence            99999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.41  E-value=1.1e-12  Score=98.85  Aligned_cols=87  Identities=24%  Similarity=0.434  Sum_probs=74.9

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ..|+..+.||+|+||.||+|.+..++..+++|.+.... .....+.+.+|+.+++++.|+||+++++++.    ..+..+
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~   78 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYL----KGTKLW   78 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc-cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE----ECCEEE
Confidence            35677889999999999999998889999999876332 2345577999999999999999999999887    678899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        79 lv~e~~~~~~L~   90 (277)
T cd06640          79 IIMEYLGGGSAL   90 (277)
T ss_pred             EEEecCCCCcHH
Confidence            999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.41  E-value=7.8e-13  Score=99.56  Aligned_cols=91  Identities=32%  Similarity=0.468  Sum_probs=74.7

Q ss_pred             hhcccccccceeecCccceeEEEEEECCC-----CcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQT-----GVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEV  177 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~-----~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  177 (199)
                      +...++|.+.+.||+|+||.||++.+...     +..+++|.+.... .......+.+|+.++..++|+||+++++++. 
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-   79 (277)
T cd05032           2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVS-   79 (277)
T ss_pred             ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEc-
Confidence            34556788999999999999999987543     4789999875332 3344567889999999999999999999887 


Q ss_pred             eecCCceEEEEEeccCCCCCC
Q psy360          178 TLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~~~~~~~~lv~E~~~~G~L~  198 (199)
                         .....++||||+++|+|.
T Consensus        80 ---~~~~~~~v~e~~~~~~L~   97 (277)
T cd05032          80 ---TGQPTLVVMELMAKGDLK   97 (277)
T ss_pred             ---CCCCcEEEEecCCCCCHH
Confidence               678899999999999874

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.41  E-value=1.3e-12  Score=99.88  Aligned_cols=85  Identities=28%  Similarity=0.389  Sum_probs=71.1

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.|++.+.||+|+||.||+|.+..++..+|+|.+..... ......+.+|+.+++.++||||+++++++.    .....
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~   78 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE-EGTPFTAIREASLLKGLKHANIVLLHDIIH----TKETL   78 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc-cccchhHHHHHHHHhhCCCCCcCeEEEEEe----cCCeE
Confidence            3578899999999999999999999999999999864321 122345778999999999999999999887    67889


Q ss_pred             EEEEeccCCC
Q psy360          186 VLVTELMTSG  195 (199)
Q Consensus       186 ~lv~E~~~~G  195 (199)
                      ++||||+.++
T Consensus        79 ~lv~e~~~~~   88 (303)
T cd07869          79 TLVFEYVHTD   88 (303)
T ss_pred             EEEEECCCcC
Confidence            9999999753

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.41  E-value=1.5e-12  Score=101.11  Aligned_cols=88  Identities=19%  Similarity=0.114  Sum_probs=68.4

Q ss_pred             hhcccccccceeecCccceeEEEEEECC-CCcEEEEEEeccccc---CHHHHHHHHHHHHHHhcCCCCCccc-eeeeeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQ-TGVAVAWCELQEKKL---NKAERARFREEAEMLKGLQHPNIVS-FYGYWEV  177 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~-~~~~~a~k~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~  177 (199)
                      +.....|.+.+.||+|+||+||+|.+.. ++..+|+|.+.....   .......+.+|+.++++++|+|++. ++.    
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----   89 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----   89 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----
Confidence            4456679999999999999999998775 677789988652211   2234567999999999999999996 433    


Q ss_pred             eecCCceEEEEEeccCCCCCC
Q psy360          178 TLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~~~~~~~~lv~E~~~~G~L~  198 (199)
                          .+..|||||||+|++|.
T Consensus        90 ----~~~~~LVmE~~~G~~L~  106 (365)
T PRK09188         90 ----TGKDGLVRGWTEGVPLH  106 (365)
T ss_pred             ----cCCcEEEEEccCCCCHH
Confidence                23469999999999874

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.41  E-value=8.8e-13  Score=99.44  Aligned_cols=88  Identities=31%  Similarity=0.447  Sum_probs=74.0

Q ss_pred             ccccccceeecCccceeEEEEEECC-----CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQ-----TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~-----~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      .+.|++.+.||+|+||.||++.+..     ++..+++|.+... ........+.+|+.+++.++|+||+++++++.    
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----   79 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES-CSEQDESDFLMEALIMSKFNHQNIVRLIGVSF----   79 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEc----
Confidence            4678899999999999999998876     6788999987532 23344567899999999999999999999887    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      ..+..++||||+++|+|.
T Consensus        80 ~~~~~~lv~e~~~g~~L~   97 (277)
T cd05036          80 ERLPRFILLELMAGGDLK   97 (277)
T ss_pred             cCCCcEEEEecCCCCCHH
Confidence            667789999999999885

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0595|consensus

Probab=99.41  E-value=1.4e-13  Score=104.92  Aligned_cols=61  Identities=20%  Similarity=0.386  Sum_probs=50.0

Q ss_pred             cceeeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            5 KSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         5 ~~~~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      .+....+.||++.|||||++. .+|+.|.|.||.|+|||++++|+.||+. .++.+++..+-+
T Consensus       167 ~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a-~t~~eL~~~~~k  228 (429)
T KOG0595|consen  167 PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA-ETPKELLLYIKK  228 (429)
T ss_pred             chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc-cCHHHHHHHHhc
Confidence            344455789999999999885 8999999999999999999999999976 566666554433

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.41  E-value=1.3e-12  Score=100.75  Aligned_cols=82  Identities=20%  Similarity=0.270  Sum_probs=68.6

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      +.||+|+||.||+|.+..++..+|+|.+..... .....+.+..|..++..+ +||||+++++++.    ..+..|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~----~~~~~~lv~E   76 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQ----TKDRLFFVME   76 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE----cCCeEEEEEe
Confidence            368999999999999999999999999865432 223445677888888866 7999999999987    7788999999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+++|+|.
T Consensus        77 ~~~~~~L~   84 (321)
T cd05591          77 YVNGGDLM   84 (321)
T ss_pred             CCCCCcHH
Confidence            99999874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.41  E-value=1.6e-12  Score=97.55  Aligned_cols=86  Identities=24%  Similarity=0.358  Sum_probs=73.1

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ++......||+|+||.||+|.+..++..+++|.+...  .....+.+.+|+.+++.++|+||+++++++.    ..+..+
T Consensus         8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----~~~~~~   81 (268)
T cd06624           8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER--DSRYVQPLHEEIALHSYLKHRNIVQYLGSDS----ENGFFK   81 (268)
T ss_pred             ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC--CHHHHHHHHHHHHHHHhcCCCCeeeeeeeec----cCCEEE
Confidence            3444556899999999999999989999999987543  3334567899999999999999999999887    678899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++++|.
T Consensus        82 lv~e~~~~~~L~   93 (268)
T cd06624          82 IFMEQVPGGSLS   93 (268)
T ss_pred             EEEecCCCCCHH
Confidence            999999999885

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.41  E-value=1e-12  Score=100.51  Aligned_cols=87  Identities=32%  Similarity=0.533  Sum_probs=71.1

Q ss_pred             cccccceeecCccceeEEEEEECCCCc--EEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCc
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGV--AVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~--~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~  183 (199)
                      ++|++.+.||+|+||.||+|.+..++.  .+++|.+.. .........+.+|+.++.++ +|+||+++++++.    ..+
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~----~~~   81 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINLLGACE----HRG   81 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecc-cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC----CCC
Confidence            467888999999999999999876664  456666542 22344556788999999999 8999999999887    677


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..|+||||+++|+|.
T Consensus        82 ~~~lv~e~~~~~~L~   96 (303)
T cd05088          82 YLYLAIEYAPHGNLL   96 (303)
T ss_pred             CceEEEEeCCCCcHH
Confidence            899999999999874

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.40  E-value=1.1e-12  Score=106.62  Aligned_cols=95  Identities=18%  Similarity=0.162  Sum_probs=77.7

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec---
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT---  180 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---  180 (199)
                      ...+.|.+.+.||+|+||.||++.+..++..+|+|.+............+.+|+.++..++|+||++++..+.....   
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            44568999999999999999999999999999999987665566666778999999999999999998876541110   


Q ss_pred             -CCceEEEEEeccCCCCCC
Q psy360          181 -KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 -~~~~~~lv~E~~~~G~L~  198 (199)
                       .....++||||+++|+|.
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~  127 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLR  127 (496)
T ss_pred             ccceEEEEEEeCCCCCcHH
Confidence             112478999999999985

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.40  E-value=9.6e-13  Score=101.91  Aligned_cols=89  Identities=31%  Similarity=0.408  Sum_probs=70.3

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee-cCCceEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL-TKRKYIV  186 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~~~  186 (199)
                      .|++.+.||+|+||.||+|.+..++..+|+|.+............+.+|+.++++++||||+++++++.... ......|
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            367889999999999999999999999999998643333334456889999999999999999999875211 1223589


Q ss_pred             EEEeccCCCCC
Q psy360          187 LVTELMTSGTL  197 (199)
Q Consensus       187 lv~E~~~~G~L  197 (199)
                      +|||||. ++|
T Consensus        81 lv~e~~~-~~L   90 (338)
T cd07859          81 VVFELME-SDL   90 (338)
T ss_pred             EEEecCC-CCH
Confidence            9999996 455

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.40  E-value=1.2e-12  Score=99.74  Aligned_cols=87  Identities=24%  Similarity=0.388  Sum_probs=75.2

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ...|++.+.||+|+||.||++.+..++..+++|.+....  ....+.+.+|+.+++.++|+||+++++++.    ..+..
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----~~~~~   91 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYL----VGDEL   91 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc--cchHHHHHHHHHHHHhCCCCCEeeEEEEEe----cCCEE
Confidence            356888999999999999999998899999999986432  223466889999999999999999999887    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        92 ~lv~e~~~~~~L~  104 (297)
T cd06656          92 WVVMEYLAGGSLT  104 (297)
T ss_pred             EEeecccCCCCHH
Confidence            9999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.40  E-value=9.2e-13  Score=98.88  Aligned_cols=81  Identities=33%  Similarity=0.409  Sum_probs=65.8

Q ss_pred             eeecCccceeEEEEEEC--CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRGSFKTVYRGLDT--QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      +.||+|+||.||+|...  .++..+++|.+.... .......+.+|+.++++++||||+++++++.    .....++|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~lv~e   75 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA-SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCT----EVTPYLLVME   75 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc----CCCCcEEEEE
Confidence            35899999999999754  345678898876433 2334456889999999999999999999887    6677899999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+++|+|.
T Consensus        76 ~~~~g~L~   83 (269)
T cd05087          76 FCPLGDLK   83 (269)
T ss_pred             CCCCCcHH
Confidence            99999985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.40  E-value=1.9e-12  Score=96.94  Aligned_cols=90  Identities=27%  Similarity=0.421  Sum_probs=73.7

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEeccccc---CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL---NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      .+|++.+.||+|+||.||++.+..++..+++|.+.....   .....+.+.+|+.++++++|+||+++++++.+.  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~   79 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP--MER   79 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC--CCc
Confidence            467889999999999999999999999999998753221   223456788999999999999999999987521  245


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..+++|||+++|+|.
T Consensus        80 ~~~~v~e~~~~~~L~   94 (265)
T cd06652          80 TLSIFMEHMPGGSIK   94 (265)
T ss_pred             eEEEEEEecCCCcHH
Confidence            788999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.40  E-value=1e-12  Score=98.77  Aligned_cols=86  Identities=29%  Similarity=0.452  Sum_probs=71.3

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccC--------HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN--------KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      |...+.||+|+||.||+|.+..++..+++|.+......        ....+.+.+|+.+++.++|+|++++++++.    
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----   78 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET----   78 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec----
Confidence            56678999999999999998888999999987532111        112356788999999999999999999887    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      ..+..++||||+++|+|.
T Consensus        79 ~~~~~~lv~e~~~~~~L~   96 (272)
T cd06629          79 TEEYLSIFLEYVPGGSIG   96 (272)
T ss_pred             cCCceEEEEecCCCCcHH
Confidence            678899999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.40  E-value=6e-13  Score=103.27  Aligned_cols=93  Identities=25%  Similarity=0.306  Sum_probs=74.7

Q ss_pred             hhhcccccccceeecCccceeEEEEEECC-----CCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeee
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQ-----TGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYW  175 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~-----~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~  175 (199)
                      |+...++|++.+.||+|+||.||+|...+     ++..+|+|.+... ......+.+.+|+.++.++ +|+||++++++|
T Consensus         2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~   80 (337)
T cd05054           2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEG-ATASEYKALMTELKILIHIGHHLNVVNLLGAC   80 (337)
T ss_pred             cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCC-CCHHHHHHHHHHHHHHHhhccCcchhheeeeE
Confidence            44566789999999999999999996433     4578999988643 2344456788899999999 799999999977


Q ss_pred             eeeecCCceEEEEEeccCCCCCC
Q psy360          176 EVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       176 ~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ..   ....++++|||+++|+|.
T Consensus        81 ~~---~~~~~~~v~ey~~~~~L~  100 (337)
T cd05054          81 TK---PGGPLMVIVEYCKFGNLS  100 (337)
T ss_pred             ec---CCCCEEEEEecCCCCCHH
Confidence            52   456789999999999884

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.40  E-value=1.1e-12  Score=97.66  Aligned_cols=84  Identities=33%  Similarity=0.526  Sum_probs=69.6

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.+.||+|+||.||++.+.. +..+++|.+......   .+.+.+|+.++++++||||+++++++.    ..+..+
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~   75 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCT----QQKPLY   75 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEc----cCCCEE
Confidence            457888999999999999997654 457899887543222   346888999999999999999999887    677899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        76 iv~e~~~~~~L~   87 (256)
T cd05114          76 IVTEFMENGCLL   87 (256)
T ss_pred             EEEEcCCCCcHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0192|consensus

Probab=99.40  E-value=1.3e-13  Score=107.05  Aligned_cols=63  Identities=30%  Similarity=0.488  Sum_probs=49.5

Q ss_pred             eeeccCCCcccccccccc---cCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhccccC
Q psy360            9 NIRTQRTPEFMAPEMYEE---HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSA   72 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~~---~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~~~~   72 (199)
                      ++...||+.|||||++++   .++.|+|||||||+||||+||+.||..... .+....++.......
T Consensus       201 ~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~~~~~Rp~  266 (362)
T KOG0192|consen  201 MTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVVVGGLRPP  266 (362)
T ss_pred             ccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhcCCCCC
Confidence            345799999999999884   499999999999999999999999987544 455555554444333

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.40  E-value=2e-12  Score=96.57  Aligned_cols=87  Identities=28%  Similarity=0.468  Sum_probs=76.1

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      +|+..+.||+|+||.||++.+..++..+++|.+..........+.+.+|+.+++.++|+||+++++.+.    ..+..++
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~----~~~~~~l   76 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV----HREKVYI   76 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe----cCCEEEE
Confidence            367789999999999999999888999999998765544446678999999999999999999999876    6788999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      |+||+++++|.
T Consensus        77 v~e~~~~~~L~   87 (264)
T cd06626          77 FMEYCSGGTLE   87 (264)
T ss_pred             EEecCCCCcHH
Confidence            99999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.40  E-value=9.1e-13  Score=98.59  Aligned_cols=87  Identities=30%  Similarity=0.515  Sum_probs=74.7

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ....+.+.+.||+|+||.||+|.+..++..+++|.+...   ....+.+.+|+.+++.++|+||+++++++.    ..+.
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~   76 (263)
T cd05052           4 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT----REPP   76 (263)
T ss_pred             chHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC---chHHHHHHHHHHHHHhCCCCChhheEEEEc----CCCC
Confidence            345678889999999999999999989999999987643   223466889999999999999999999887    6778


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .+++|||+++|+|.
T Consensus        77 ~~lv~e~~~~~~L~   90 (263)
T cd05052          77 FYIITEFMTYGNLL   90 (263)
T ss_pred             cEEEEEeCCCCcHH
Confidence            89999999999885

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.40  E-value=1.6e-12  Score=99.96  Aligned_cols=82  Identities=21%  Similarity=0.310  Sum_probs=67.1

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      +.||+|+||.||+|.+..++..+|+|.+...... ......+..|..++..+ +||||+++++++.    ..+..++|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~----~~~~~~lv~e   76 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ----TKENLFFVME   76 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEE----eCCEEEEEEe
Confidence            3689999999999999999999999998754321 22344566777787764 8999999999887    6788999999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+++|+|.
T Consensus        77 y~~~g~L~   84 (316)
T cd05619          77 YLNGGDLM   84 (316)
T ss_pred             CCCCCcHH
Confidence            99999984

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0696|consensus

Probab=99.40  E-value=4.1e-13  Score=103.12  Aligned_cols=60  Identities=25%  Similarity=0.524  Sum_probs=49.7

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhc
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      .+.+.||||.|+|||++. ..|+.++|+|||||+||||+.|+.||++ .+..+++..|...+
T Consensus       506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG-eDE~elF~aI~ehn  566 (683)
T KOG0696|consen  506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG-EDEDELFQAIMEHN  566 (683)
T ss_pred             ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHHcc
Confidence            345789999999999876 8899999999999999999999999987 44455666665543

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.40  E-value=8.4e-13  Score=98.85  Aligned_cols=88  Identities=34%  Similarity=0.570  Sum_probs=74.9

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      +.|++.+.||+|+||.||++.+..++..+++|.+..... .....+.+.+|+.+++.++|+||+++++++.    .++..
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----~~~~~   77 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI----EDNEL   77 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE----eCCeE
Confidence            357788999999999999999988999999998764332 2334567889999999999999999999887    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      +++|||+++|+|.
T Consensus        78 ~~v~e~~~~~~L~   90 (267)
T cd08229          78 NIVLELADAGDLS   90 (267)
T ss_pred             EEEEEecCCCCHH
Confidence            9999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.40  E-value=1.6e-12  Score=100.11  Aligned_cols=82  Identities=20%  Similarity=0.251  Sum_probs=68.9

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      +.||+|+||.||++.+..++..+|+|.+...... ......+..|+.++..+ +||||+++++++.    ..+..|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~----~~~~~~lv~e   76 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQ----TKDRLFFVME   76 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE----cCCEEEEEEc
Confidence            3689999999999999999999999998754322 23445677899999888 6999999999887    6788999999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+++|+|.
T Consensus        77 ~~~~~~L~   84 (318)
T cd05570          77 YVNGGDLM   84 (318)
T ss_pred             CCCCCCHH
Confidence            99999874

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.40  E-value=1.5e-12  Score=98.43  Aligned_cols=88  Identities=35%  Similarity=0.487  Sum_probs=71.7

Q ss_pred             cccccceeecCccceeEEEEEE----CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLD----TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~----~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      +.+++.+.||+|+||.||++..    ..++..+++|.+...  .....+.+.+|+.++++++|+||+++++++..  ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~   79 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYS--AGR   79 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEcc--CCC
Confidence            4678899999999999999874    456788999987543  34445678999999999999999999997642  134


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ...++||||+++|+|.
T Consensus        80 ~~~~lv~e~~~~~~L~   95 (284)
T cd05081          80 RNLRLVMEYLPYGSLR   95 (284)
T ss_pred             CceEEEEEecCCCCHH
Confidence            5789999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.40  E-value=9.7e-13  Score=98.56  Aligned_cols=87  Identities=24%  Similarity=0.450  Sum_probs=74.7

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .++|++.+.||+|+||.||++.+..++..+++|.+...  .......+.+|+.+++.++||||+++++++.    ..+..
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~----~~~~~   81 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLE--PGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL----RRDKL   81 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecC--chhHHHHHHHHHHHHHhCCCCCeeeEEEEEE----eCCEE
Confidence            35788899999999999999999999999999988543  2233456788999999999999999999887    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |+||||+++|+|.
T Consensus        82 ~lv~e~~~~~~L~   94 (267)
T cd06645          82 WICMEFCGGGSLQ   94 (267)
T ss_pred             EEEEeccCCCcHH
Confidence            9999999999885

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0658|consensus

Probab=99.40  E-value=1.9e-13  Score=102.91  Aligned_cols=82  Identities=28%  Similarity=0.373  Sum_probs=65.7

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC-CceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK-RKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~~~~  185 (199)
                      -.+...+.+|+|+||.||+|....++..+|+|++..+...      -.+|+.+|+.++|||||+|.-+|...... .-+.
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~------knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l   97 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY------KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL   97 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc------CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence            3467779999999999999999999999999998754332      23799999999999999999888644333 2256


Q ss_pred             EEEEeccCC
Q psy360          186 VLVTELMTS  194 (199)
Q Consensus       186 ~lv~E~~~~  194 (199)
                      .+|||||+.
T Consensus        98 nlVleymP~  106 (364)
T KOG0658|consen   98 NLVLEYMPE  106 (364)
T ss_pred             HHHHHhchH
Confidence            789999973

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.39  E-value=1.2e-12  Score=98.05  Aligned_cols=86  Identities=22%  Similarity=0.387  Sum_probs=73.3

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccC----HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN----KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      |+..+.||+|+||.||++.+..++..+++|.+......    ....+.+.+|+.++++++|+||+++++++.    ..+.
T Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----~~~~   77 (268)
T cd06630           2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC----EDSH   77 (268)
T ss_pred             ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec----cCCe
Confidence            56778999999999999999899999999988643211    123567899999999999999999999887    6788


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++|+|.
T Consensus        78 ~~~v~e~~~~~~L~   91 (268)
T cd06630          78 FNLFVEWMAGGSVS   91 (268)
T ss_pred             EEEEEeccCCCcHH
Confidence            99999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.39  E-value=1.4e-12  Score=100.50  Aligned_cols=82  Identities=21%  Similarity=0.324  Sum_probs=68.2

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      +.||+|+||.||++.+..++..+|+|.+..... .......+..|..++..+ +||||+++++++.    ..+..|+|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~----~~~~~~iv~E   76 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQ----TPDRLFFVME   76 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEE----cCCEEEEEEc
Confidence            368999999999999999999999999865432 222345677888888876 6999999999887    7788999999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+++|+|.
T Consensus        77 y~~~g~L~   84 (320)
T cd05590          77 FVNGGDLM   84 (320)
T ss_pred             CCCCchHH
Confidence            99999874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.39  E-value=2e-12  Score=99.31  Aligned_cols=87  Identities=26%  Similarity=0.378  Sum_probs=75.7

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +|+..+.||+|+||.||++.+..++..+++|.+....... ...+.+..|+.++..++|+||+++++.+.    .....|
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~   77 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ----TETYLC   77 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee----cCCEEE
Confidence            5788899999999999999999999999999987554332 34567899999999999999999999887    678899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        78 lv~e~~~~~~L~   89 (316)
T cd05574          78 LVMDYCPGGELF   89 (316)
T ss_pred             EEEEecCCCCHH
Confidence            999999999885

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.39  E-value=5.4e-13  Score=100.57  Aligned_cols=87  Identities=26%  Similarity=0.445  Sum_probs=74.0

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|+..+.||+|+||.||+|.+..++..+++|.+.... .....+.+.+|+.++++++|+||+++++++.    .++..|
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~   78 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYITRYYGSYL----KGTKLW   78 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc-chHHHHHHHHHHHHHHcCCCCccHhhhcccc----cCCceE
Confidence            34677788999999999999998889999999875332 2334567899999999999999999999887    678899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        79 lv~e~~~~~~L~   90 (277)
T cd06642          79 IIMEYLGGGSAL   90 (277)
T ss_pred             EEEEccCCCcHH
Confidence            999999999874

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.39  E-value=1e-12  Score=100.04  Aligned_cols=88  Identities=31%  Similarity=0.451  Sum_probs=71.9

Q ss_pred             ccccccceeecCccceeEEEEEEC----------------CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCcc
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDT----------------QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV  169 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~----------------~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv  169 (199)
                      .++|++.+.||+|+||.||++.+.                .++..+|+|.+... ......+.+.+|+.++++++|+||+
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~~~E~~~l~~l~~~~i~   82 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED-ANKNARNDFLKEIKIMSRLKDPNII   82 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCcc
Confidence            456899999999999999998533                23456888887643 2344556799999999999999999


Q ss_pred             ceeeeeeeeecCCceEEEEEeccCCCCCC
Q psy360          170 SFYGYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       170 ~l~~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++++++.    ..+..++||||+++|+|.
T Consensus        83 ~~~~~~~----~~~~~~lv~e~~~~~~L~  107 (296)
T cd05095          83 RLLAVCI----TSDPLCMITEYMENGDLN  107 (296)
T ss_pred             eEEEEEe----cCCccEEEEEeCCCCcHH
Confidence            9999887    677899999999999884

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.39  E-value=1.1e-12  Score=99.41  Aligned_cols=88  Identities=30%  Similarity=0.475  Sum_probs=73.3

Q ss_pred             ccccccceeecCccceeEEEEEECC-----CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQ-----TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~-----~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      .++|++.+.||+|+||.||++.+..     ++..+++|.+... ........+.+|+.+++++.|+||+++++++.    
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~----   78 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDHPNIVKLLGVCA----   78 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCC-cCHHHHHHHHHHHHHHHhcCCCchheEEEEEc----
Confidence            4578889999999999999998643     5678999987633 23444567999999999999999999999887    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      ..+..++||||+++|+|.
T Consensus        79 ~~~~~~lv~e~~~~~~L~   96 (288)
T cd05050          79 VGKPMCLLFEYMAYGDLN   96 (288)
T ss_pred             CCCccEEEEecCCCCCHH
Confidence            677889999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.39  E-value=2.3e-12  Score=96.32  Aligned_cols=87  Identities=23%  Similarity=0.350  Sum_probs=74.9

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ++|++.+.||.|+||.||++....++..+++|.+....... ..+.+.+|+.+++.++|+||+++++.+.    ..+..+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~   75 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFV----VGDELW   75 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEe----eCCEEE
Confidence            35788999999999999999988889999999886443333 5677999999999999999999999877    678899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++++|.
T Consensus        76 iv~e~~~~~~l~   87 (267)
T cd06610          76 LVMPYLSGGSLL   87 (267)
T ss_pred             EEEeccCCCcHH
Confidence            999999999874

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.39  E-value=2.1e-12  Score=97.56  Aligned_cols=86  Identities=24%  Similarity=0.453  Sum_probs=74.3

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.+.||+|+||.||++.+..++..+++|.+...  .....+.+.+|+.+++.++|+||+++++++.    ..+..+
T Consensus         5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~----~~~~~~   78 (282)
T cd06643           5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFY----YENNLW   78 (282)
T ss_pred             HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEe----eCCEEE
Confidence            3467889999999999999999999999999988533  3445667889999999999999999999887    678899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        79 ~v~e~~~~~~l~   90 (282)
T cd06643          79 ILIEFCAGGAVD   90 (282)
T ss_pred             EEEEecCCCcHH
Confidence            999999999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.39  E-value=1.7e-12  Score=97.26  Aligned_cols=88  Identities=31%  Similarity=0.461  Sum_probs=72.5

Q ss_pred             ccccccceeecCccceeEEEEEECCCCc---EEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGV---AVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~---~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      .++|+..+.||+|+||.||++.+..++.   .+++|.+... ......+.+..|+.++.+++|+||+++.+++.    ..
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~   78 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPG-YTEKQRQDFLSEASIMGQFSHHNIIRLEGVVT----KF   78 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc----cC
Confidence            3567788999999999999998765443   6888887533 23445667899999999999999999999887    67


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..++||||+++|+|.
T Consensus        79 ~~~~lv~e~~~~~~L~   94 (268)
T cd05063          79 KPAMIITEYMENGALD   94 (268)
T ss_pred             CCcEEEEEcCCCCCHH
Confidence            7899999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.39  E-value=2.6e-12  Score=99.14  Aligned_cols=87  Identities=18%  Similarity=0.192  Sum_probs=71.3

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCceE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      +|.+.+.||+|+||.||++.+..++..+|+|.+...... ......+..|..++..+ +|++|+++++++.    ..+..
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~----~~~~~   76 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQ----TMDRL   76 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEe----cCCEE
Confidence            367789999999999999999999999999998754322 22344567788888777 5899999999887    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |+||||+++|+|.
T Consensus        77 ~lv~E~~~~g~L~   89 (323)
T cd05616          77 YFVMEYVNGGDLM   89 (323)
T ss_pred             EEEEcCCCCCCHH
Confidence            9999999999884

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.39  E-value=1e-12  Score=98.11  Aligned_cols=87  Identities=31%  Similarity=0.458  Sum_probs=72.3

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ...+.|++.+.||+|+||.||+|.+. .+..+++|.+....   ...+.+.+|+.+++.++|+||+++++++.    ..+
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~   74 (261)
T cd05072           3 IPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVT----KEE   74 (261)
T ss_pred             CchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEc----CCC
Confidence            45578899999999999999999854 45668998875432   23467899999999999999999999876    677


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..+++|||+++|+|.
T Consensus        75 ~~~lv~e~~~~~~L~   89 (261)
T cd05072          75 PIYIITEYMAKGSLL   89 (261)
T ss_pred             CcEEEEecCCCCcHH
Confidence            889999999999874

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.39  E-value=2.2e-12  Score=95.99  Aligned_cols=86  Identities=30%  Similarity=0.475  Sum_probs=72.8

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEeccccc---CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL---NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      |+..+.||+|+||+||+|.+..++..+++|.+.....   ..+..+.+.+|+.+++.++|+||+++++++.    ..+..
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----~~~~~   77 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER----EEDNL   77 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe----cCCeE
Confidence            5667889999999999999888899999998754321   2334567899999999999999999999887    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      +++|||+++++|.
T Consensus        78 ~lv~e~~~~~~L~   90 (258)
T cd06632          78 YIFLELVPGGSLA   90 (258)
T ss_pred             EEEEEecCCCcHH
Confidence            9999999999874

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.39  E-value=1.4e-12  Score=100.30  Aligned_cols=87  Identities=29%  Similarity=0.421  Sum_probs=70.5

Q ss_pred             ccccccceeecCccceeEEEEEECCCCc----EEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGV----AVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~----~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      ...|+..+.||+|+||.||+|.+..++.    .+|+|.+... ......+.+.+|+.+++.++|+||++++++|.     
T Consensus         6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~-----   79 (316)
T cd05108           6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICL-----   79 (316)
T ss_pred             hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEc-----
Confidence            3468889999999999999998765554    3888887532 23445567889999999999999999999885     


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..++|+||+++|+|.
T Consensus        80 ~~~~~~v~e~~~~g~l~   96 (316)
T cd05108          80 TSTVQLITQLMPFGCLL   96 (316)
T ss_pred             CCCceeeeecCCCCCHH
Confidence            34568999999999874

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.39  E-value=2.1e-12  Score=99.66  Aligned_cols=86  Identities=19%  Similarity=0.217  Sum_probs=70.6

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCC-CCCccceeeeeeeeecCCceEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      |+..+.||+|+||.||++.+..++..+|+|.+..... .....+.+..|..++..+. |++|+++++++.    ..+..|
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~----~~~~~~   77 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQ----TVDRLY   77 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEe----cCCEEE
Confidence            5677899999999999999999999999999875432 2233456778899998886 577888988887    678899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        78 lv~Ey~~~g~L~   89 (323)
T cd05615          78 FVMEYVNGGDLM   89 (323)
T ss_pred             EEEcCCCCCcHH
Confidence            999999999874

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.39  E-value=2.2e-12  Score=99.31  Aligned_cols=82  Identities=20%  Similarity=0.286  Sum_probs=66.2

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      +.||+|+||.||++.+..++..+|+|.+..... .....+.+..|..++..+ +||||+++++++.    ..+..|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~----~~~~~~lv~e   76 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQ----TKEHLFFVME   76 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEE----cCCEEEEEEc
Confidence            368999999999999999999999999875432 222344556677777654 7999999999887    6788999999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |++||+|.
T Consensus        77 ~~~gg~L~   84 (316)
T cd05592          77 YLNGGDLM   84 (316)
T ss_pred             CCCCCcHH
Confidence            99999884

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0661|consensus

Probab=99.39  E-value=8.3e-14  Score=108.00  Aligned_cols=85  Identities=25%  Similarity=0.359  Sum_probs=71.7

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~  183 (199)
                      ..++|..++.||.|.||.||+|....++..||+|.+.++... -+.-.-++|+..|++|+ |||||+|.+.+.    +.+
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~----d~~   82 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIR----DND   82 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhh----ccC
Confidence            446789999999999999999999999999999998755433 33344678999999998 999999999887    444


Q ss_pred             -eEEEEEeccCC
Q psy360          184 -YIVLVTELMTS  194 (199)
Q Consensus       184 -~~~lv~E~~~~  194 (199)
                       .+|+|||||+.
T Consensus        83 ~~L~fVfE~Md~   94 (538)
T KOG0661|consen   83 RILYFVFEFMDC   94 (538)
T ss_pred             ceEeeeHHhhhh
Confidence             89999999974

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.39  E-value=1.7e-12  Score=98.04  Aligned_cols=85  Identities=27%  Similarity=0.394  Sum_probs=74.2

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLV  188 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv  188 (199)
                      |++.+.||+|+||.||+|.+..++..+++|.+..........+.+.+|+.++++++|+||+++++++.    .....++|
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~----~~~~~~~v   77 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFP----HGSGFVLV   77 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEe----cCCeeEEE
Confidence            67889999999999999999889999999998755443444567899999999999999999999887    67889999


Q ss_pred             EeccCCCCCC
Q psy360          189 TELMTSGTLK  198 (199)
Q Consensus       189 ~E~~~~G~L~  198 (199)
                      |||+ +++|.
T Consensus        78 ~e~~-~~~L~   86 (286)
T cd07832          78 MEYM-PSDLS   86 (286)
T ss_pred             eccc-CCCHH
Confidence            9999 88874

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.39  E-value=2.3e-12  Score=96.68  Aligned_cols=90  Identities=26%  Similarity=0.366  Sum_probs=70.8

Q ss_pred             cccceeecCccceeEEEEEECC---CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee--cCCc
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQ---TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL--TKRK  183 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~~  183 (199)
                      |++.+.||+|+||.||+|....   ++..+|+|.+............+.+|+..++.++|+||+++++++....  ....
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            4677899999999999997654   3478999998765555556678999999999999999999999775211  1123


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..+++|||+++|+|.
T Consensus        81 ~~~~v~e~~~~~~l~   95 (273)
T cd05035          81 KPMVILPFMKHGDLH   95 (273)
T ss_pred             ccEEEEeccCCCCHH
Confidence            479999999999874

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.39  E-value=1.4e-12  Score=97.49  Aligned_cols=87  Identities=30%  Similarity=0.489  Sum_probs=72.7

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..++.+++.+.||+|+||.||++.+.. +..+++|.+.....   ..+.+.+|+.++++++|+||+++++++.    ..+
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~   74 (261)
T cd05068           3 IDRTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCT----LEE   74 (261)
T ss_pred             cchhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEe----cCC
Confidence            455678999999999999999998654 46799998864332   2356889999999999999999999887    677


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus        75 ~~~lv~e~~~~~~L~   89 (261)
T cd05068          75 PIYIVTELMKYGSLL   89 (261)
T ss_pred             CeeeeeecccCCcHH
Confidence            899999999999884

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0199|consensus

Probab=99.39  E-value=2.1e-13  Score=110.46  Aligned_cols=88  Identities=35%  Similarity=0.436  Sum_probs=74.2

Q ss_pred             ccccccceeecCccceeEEEEEECC---CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQ---TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      .+.+++.+.||+|.||.|++|.|..   +-..||||++....... ..++|++|+.+|.+|.|+|+++|+|...     +
T Consensus       109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl-----~  182 (1039)
T KOG0199|consen  109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVL-----D  182 (1039)
T ss_pred             HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeec-----c
Confidence            3456778999999999999998854   34579999998665544 6688999999999999999999999774     4


Q ss_pred             ceEEEEEeccCCCCCCC
Q psy360          183 KYIVLVTELMTSGTLKT  199 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~~  199 (199)
                      +...||||+++.|+|.+
T Consensus       183 qp~mMV~ELaplGSLld  199 (1039)
T KOG0199|consen  183 QPAMMVFELAPLGSLLD  199 (1039)
T ss_pred             chhhHHhhhcccchHHH
Confidence            78899999999999853

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.39  E-value=3e-12  Score=100.16  Aligned_cols=91  Identities=26%  Similarity=0.302  Sum_probs=73.7

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee--cCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL--TKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~  182 (199)
                      ..+.|++.+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.++||||+++++++....  ...
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            346789999999999999999999999999999998654434445567889999999999999999999875211  112


Q ss_pred             ceEEEEEeccCCC
Q psy360          183 KYIVLVTELMTSG  195 (199)
Q Consensus       183 ~~~~lv~E~~~~G  195 (199)
                      ...|+||||++++
T Consensus        99 ~~~~lv~e~~~~~  111 (359)
T cd07876          99 QDVYLVMELMDAN  111 (359)
T ss_pred             ceeEEEEeCCCcC
Confidence            4579999999865

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0574|consensus

Probab=99.39  E-value=3.4e-14  Score=104.92  Aligned_cols=83  Identities=17%  Similarity=0.375  Sum_probs=73.0

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|.+...||+|+||.||++.++.+|..+|+|.+..    +.+.+.+..|+.||++++.+++|+++|.|.    ....+|
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV----~sDLQEIIKEISIMQQC~S~yVVKYYGSYF----K~sDLW  104 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV----DTDLQEIIKEISIMQQCKSKYVVKYYGSYF----KHSDLW  104 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc----cchHHHHHHHHHHHHHcCCchhhhhhhhhc----cCCceE
Confidence            467889999999999999999999999999998753    335677999999999999999999999555    677899


Q ss_pred             EEEeccCCCCC
Q psy360          187 LVTELMTSGTL  197 (199)
Q Consensus       187 lv~E~~~~G~L  197 (199)
                      ||||||-.|+.
T Consensus       105 IVMEYCGAGSi  115 (502)
T KOG0574|consen  105 IVMEYCGAGSI  115 (502)
T ss_pred             eehhhcCCCcH
Confidence            99999998875

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.39  E-value=2.1e-12  Score=98.46  Aligned_cols=87  Identities=24%  Similarity=0.381  Sum_probs=74.9

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ...|++.+.||+|+||.||++.+..++..+++|.+.....  ...+.+.+|+.+++.+.|+||+++++++.    .....
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~v~~~~~~~~----~~~~~   92 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYL----VGDEL   92 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhCCCCCEeeEEEEEE----eCCEE
Confidence            3568888999999999999999989999999998864332  23466889999999999999999999887    67789


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        93 ~lv~e~~~~~~L~  105 (296)
T cd06654          93 WVVMEYLAGGSLT  105 (296)
T ss_pred             EEeecccCCCCHH
Confidence            9999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.38  E-value=3e-12  Score=98.79  Aligned_cols=82  Identities=27%  Similarity=0.374  Sum_probs=65.8

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHH-HHhcCCCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAE-MLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      +.||+|+||+||++.+..++..+|+|.+...... ......+..|.. +++.++||||+++++++.    ..+..|+|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~----~~~~~~lv~e   76 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ----TADKLYFVLD   76 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEE----eCCEEEEEEc
Confidence            3689999999999999999999999998654322 223344555554 567899999999999887    6788999999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+++|+|.
T Consensus        77 ~~~~g~L~   84 (323)
T cd05575          77 YVNGGELF   84 (323)
T ss_pred             CCCCCCHH
Confidence            99999884

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.38  E-value=2e-12  Score=108.66  Aligned_cols=88  Identities=24%  Similarity=0.320  Sum_probs=75.9

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      +.|.+.+.||+|+||.||+|.+..++..||+|.+..... .......+..|+.++..++|+||+++++++.    ..+..
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~----~~~~~   79 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQ----SANNV   79 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEE----ECCEE
Confidence            567889999999999999999999999999999864332 3334567889999999999999999998876    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ||||||+.||+|.
T Consensus        80 ~lVmEy~~g~~L~   92 (669)
T cd05610          80 YLVMEYLIGGDVK   92 (669)
T ss_pred             EEEEeCCCCCCHH
Confidence            9999999999874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.38  E-value=1.3e-12  Score=98.43  Aligned_cols=79  Identities=19%  Similarity=0.309  Sum_probs=62.5

Q ss_pred             eecCccceeEEEEEECC------------------------CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCcc
Q psy360          114 EIGRGSFKTVYRGLDTQ------------------------TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV  169 (199)
Q Consensus       114 ~lG~G~fg~v~~~~~~~------------------------~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv  169 (199)
                      .||+|+||.||+|....                        ....+++|.+...  .......+.+|+.+++.++||||+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv   79 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS--HRDIALAFFETASLMSQVSHIHLA   79 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH--HHHHHHHHHHHHHHHhcCCCCCee
Confidence            58999999999986421                        1245777777532  223345688899999999999999


Q ss_pred             ceeeeeeeeecCCceEEEEEeccCCCCCC
Q psy360          170 SFYGYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       170 ~l~~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++++++.    ..+..++||||+++|+|.
T Consensus        80 ~~~~~~~----~~~~~~lv~ey~~~g~L~  104 (274)
T cd05076          80 FVHGVCV----RGSENIMVEEFVEHGPLD  104 (274)
T ss_pred             eEEEEEE----eCCceEEEEecCCCCcHH
Confidence            9999987    677889999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.38  E-value=2.2e-12  Score=96.31  Aligned_cols=88  Identities=32%  Similarity=0.479  Sum_probs=73.9

Q ss_pred             hhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      +...+.|.+.+.||+|+||.||++.+. .+..+++|.+......   .+.+.+|+.++++++|+||+++++++.    ..
T Consensus         2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~   73 (261)
T cd05034           2 EIPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRHDKLVQLYAVCS----EE   73 (261)
T ss_pred             ccchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccC---HHHHHHHHHHHhhCCCCCEeeeeeeee----cC
Confidence            456778999999999999999999865 4467899988644322   356889999999999999999999887    66


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ...++||||+++|+|.
T Consensus        74 ~~~~~v~e~~~~~~L~   89 (261)
T cd05034          74 EPIYIVTEYMSKGSLL   89 (261)
T ss_pred             CceEEEEeccCCCCHH
Confidence            7899999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.38  E-value=4e-13  Score=94.60  Aligned_cols=54  Identities=31%  Similarity=0.587  Sum_probs=43.6

Q ss_pred             ccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           12 TQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        12 ~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ..||+.|||||++. +.++.++|||||||++|||++|+.||.........+..+.
T Consensus        64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~  118 (176)
T smart00750       64 SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILL  118 (176)
T ss_pred             CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHH
Confidence            37899999999886 5799999999999999999999999976544444444443

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0575|consensus

Probab=99.38  E-value=3.8e-13  Score=107.02  Aligned_cols=66  Identities=18%  Similarity=0.301  Sum_probs=56.2

Q ss_pred             ceeeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhccccC
Q psy360            6 SYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSA   72 (199)
Q Consensus         6 ~~~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~~~~   72 (199)
                      +++-.+.||||.|+|||++. ..++-.+|+||+||++|-|++|++||.. .+.++.+..+....+..+
T Consensus       172 ~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet-k~vkety~~Ik~~~Y~~P  238 (592)
T KOG0575|consen  172 GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET-KTVKETYNKIKLNEYSMP  238 (592)
T ss_pred             ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc-chHHHHHHHHHhcCcccc
Confidence            36667899999999999886 5699999999999999999999999976 667788888777766544

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.38  E-value=2.7e-12  Score=98.15  Aligned_cols=92  Identities=27%  Similarity=0.365  Sum_probs=74.5

Q ss_pred             hhhcccccccceeecCccceeEEEEEE-----CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeee
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLD-----TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYW  175 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~-----~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~  175 (199)
                      ++...++|.+.+.||+|+||.||++.+     ..++..+|+|.+.... .....+.+.+|+.+++++ +|+||+++++++
T Consensus        30 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  108 (302)
T cd05055          30 WEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGAC  108 (302)
T ss_pred             ccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence            344556789999999999999999875     2345678998875432 334456789999999999 799999999988


Q ss_pred             eeeecCCceEEEEEeccCCCCCC
Q psy360          176 EVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       176 ~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      .    ..+..++||||+++|+|.
T Consensus       109 ~----~~~~~~lv~e~~~~~~L~  127 (302)
T cd05055         109 T----IGGPILVITEYCCYGDLL  127 (302)
T ss_pred             e----cCCceEEEEEcCCCCcHH
Confidence            7    677899999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.38  E-value=1.8e-12  Score=97.87  Aligned_cols=87  Identities=36%  Similarity=0.585  Sum_probs=72.6

Q ss_pred             cccccceeecCccceeEEEEEECCCC-----cEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTG-----VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~-----~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      +.+++.+.||+|+||.||+|.....+     ..+++|.+... ......+.+.+|+.++.+++||||+++++++.    .
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~----~   79 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN-AEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT----K   79 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC-CCHHHHHHHHHHHHHHHhcCCcccceEEEEEc----C
Confidence            46788999999999999999875544     67889887633 23445567899999999999999999999887    6


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      ....+++|||+++|+|.
T Consensus        80 ~~~~~~~~e~~~~~~L~   96 (283)
T cd05048          80 EQPTCMLFEYLAHGDLH   96 (283)
T ss_pred             CCceEEEEecCCCCcHH
Confidence            77889999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.38  E-value=3.2e-12  Score=98.69  Aligned_cols=82  Identities=27%  Similarity=0.404  Sum_probs=66.0

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHH-HHhcCCCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAE-MLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      +.||+|+||+||++.+..++..+|+|.+..... .......+..|.. +++.++||||+++++++.    ..+..|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~----~~~~~~lv~e   76 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ----TTEKLYFVLD   76 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEe----cCCEEEEEEc
Confidence            368999999999999999999999999865432 2223344555554 567789999999999887    7789999999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+++|+|.
T Consensus        77 ~~~~~~L~   84 (325)
T cd05604          77 FVNGGELF   84 (325)
T ss_pred             CCCCCCHH
Confidence            99999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.38  E-value=2.9e-12  Score=99.03  Aligned_cols=82  Identities=18%  Similarity=0.280  Sum_probs=69.5

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      +.||+|+||+||++.+..++..+|+|.+...... ....+.+.+|+.++.++ +|+||+++++++.    ..+..|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~----~~~~~~lv~e   76 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQ----TTSRLFLVIE   76 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEE----eCCEEEEEEe
Confidence            4699999999999999999999999999754332 23456688899999888 6999999999887    6788999999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+++|+|.
T Consensus        77 ~~~~~~L~   84 (327)
T cd05617          77 YVNGGDLM   84 (327)
T ss_pred             CCCCCcHH
Confidence            99999874

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.38  E-value=1.3e-12  Score=98.49  Aligned_cols=88  Identities=34%  Similarity=0.517  Sum_probs=73.0

Q ss_pred             ccccccceeecCccceeEEEEEEC-----CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDT-----QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      .+.|.+.+.||+|+||.||+|.+.     .++..+++|.+... ......+.+.+|+.++.+++|+||+++++++.    
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----   78 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKET-ASNDARKDFEREAELLTNFQHENIVKFYGVCT----   78 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeeccc-CCHHHHHHHHHHHHHHHhcCCCCchheeeEEe----
Confidence            356788899999999999999764     34578999988643 23334578999999999999999999999887    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      .....++||||+++|+|.
T Consensus        79 ~~~~~~lv~e~~~~~~L~   96 (280)
T cd05049          79 EGDPPIMVFEYMEHGDLN   96 (280)
T ss_pred             cCCCeEEEEecCCCCCHH
Confidence            668899999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.38  E-value=2.6e-12  Score=97.19  Aligned_cols=97  Identities=26%  Similarity=0.405  Sum_probs=76.7

Q ss_pred             hhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeee
Q psy360           99 EEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEV  177 (199)
Q Consensus        99 ~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  177 (199)
                      .+..+...++|++.+.||+|+||.||++.+..++..+++|.+....   .....+.+|+.+++++ +|+||+++++++..
T Consensus        10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638          10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            3445556778999999999999999999999999999999875321   2234577899999999 69999999997742


Q ss_pred             ee-cCCceEEEEEeccCCCCCC
Q psy360          178 TL-TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~-~~~~~~~lv~E~~~~G~L~  198 (199)
                      .. ..++..++||||+++|+|.
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~  108 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVT  108 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHH
Confidence            11 1346789999999999874

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.37  E-value=1.7e-12  Score=100.51  Aligned_cols=93  Identities=24%  Similarity=0.351  Sum_probs=74.6

Q ss_pred             hhhhcccccccceeecCccceeEEEEEECC-------CCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCcccee
Q psy360          101 ERESMRGYLKFEEEIGRGSFKTVYRGLDTQ-------TGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFY  172 (199)
Q Consensus       101 ~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~-------~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~  172 (199)
                      .++....+|++.+.||+|+||.||++.+..       ....+++|.+.. .......+.+.+|+.++.++ +|+||++++
T Consensus         6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~   84 (334)
T cd05100           6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKD-DATDKDLSDLVSEMEMMKMIGKHKNIINLL   84 (334)
T ss_pred             ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccc-ccCHHHHHHHHHHHHHHHhhcCCCCeeeee
Confidence            345556678999999999999999997543       224688887753 23344567789999999999 799999999


Q ss_pred             eeeeeeecCCceEEEEEeccCCCCCC
Q psy360          173 GYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       173 ~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++|.    ..+..+++|||+++|+|.
T Consensus        85 ~~~~----~~~~~~lv~e~~~~g~L~  106 (334)
T cd05100          85 GACT----QDGPLYVLVEYASKGNLR  106 (334)
T ss_pred             EEEc----cCCceEEEEecCCCCcHH
Confidence            9887    677899999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.37  E-value=1.7e-12  Score=98.82  Aligned_cols=85  Identities=26%  Similarity=0.435  Sum_probs=72.1

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccC---HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN---KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      |++.+.||+|+||.||+|.+..++..+++|.+......   ......+..|+.++++++|+||+++++++.    ..+..
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----~~~~~   77 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFG----HKSNI   77 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheee----cCCEE
Confidence            66778999999999999999988999999998654333   223456778999999999999999999987    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+ +|+|.
T Consensus        78 ~lv~e~~-~~~L~   89 (298)
T cd07841          78 NLVFEFM-ETDLE   89 (298)
T ss_pred             EEEEccc-CCCHH
Confidence            9999999 88774

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.37  E-value=3.5e-12  Score=95.14  Aligned_cols=87  Identities=29%  Similarity=0.497  Sum_probs=75.2

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.|++.+.||+|+||.||++.+..++..+++|.+....  ....+.+.+|+.++++++||||+++++++.    ..+..
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----~~~~~   75 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP--GDDFEIIQQEISMLKECRHPNIVAYFGSYL----RRDKL   75 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc--hhhHHHHHHHHHHHHhCCCCChhceEEEEE----eCCEE
Confidence            457888999999999999999998888899999886432  224577899999999999999999999887    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      +++|||+++++|.
T Consensus        76 ~l~~e~~~~~~l~   88 (262)
T cd06613          76 WIVMEYCGGGSLQ   88 (262)
T ss_pred             EEEEeCCCCCcHH
Confidence            9999999998874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG1989|consensus

Probab=99.37  E-value=1.8e-12  Score=106.87  Aligned_cols=93  Identities=22%  Similarity=0.273  Sum_probs=74.3

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeee-eeeeecC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGY-WEVTLTK  181 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~~~~~  181 (199)
                      .....+++.+.|.+|||+.||.+.+...+..+|+|++-..  .....+...+|+.+|++|+ |+|||.+++. .......
T Consensus        34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~  111 (738)
T KOG1989|consen   34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSN  111 (738)
T ss_pred             ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCC
Confidence            4455688899999999999999999888899999987543  4556678999999999997 9999999993 2211112


Q ss_pred             --CceEEEEEeccCCCCCC
Q psy360          182 --RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 --~~~~~lv~E~~~~G~L~  198 (199)
                        .-+++|+||||.||.|-
T Consensus       112 ~~~~EvllLmEyC~gg~Lv  130 (738)
T KOG1989|consen  112 NGVWEVLLLMEYCKGGSLV  130 (738)
T ss_pred             CceeEEEeehhhccCCcHH
Confidence              34789999999998773

>KOG0615|consensus

Probab=99.37  E-value=6.4e-14  Score=106.93  Aligned_cols=68  Identities=16%  Similarity=0.308  Sum_probs=55.7

Q ss_pred             cceeeeeccCCCccccccccc-cc---CCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhccccC
Q psy360            5 KSYVNIRTQRTPEFMAPEMYE-EH---YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSA   72 (199)
Q Consensus         5 ~~~~~~~~~gt~~y~ape~~~-~~---~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~~~~   72 (199)
                      .++.+.+.||||.|.|||++. +.   +..|+|+||+||+||.+++|.+||.+........+.+.+..+...
T Consensus       331 ~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~  402 (475)
T KOG0615|consen  331 EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFG  402 (475)
T ss_pred             cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCccccc
Confidence            466778999999999999875 22   456999999999999999999999987776667777777766544

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.37  E-value=2.4e-12  Score=96.85  Aligned_cols=86  Identities=26%  Similarity=0.439  Sum_probs=73.9

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      +|++.+.||.|+||.||++.+..++..+++|.+.... .......+.+|+.+++.++|+||+++.+++.    .....++
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~~   76 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFL----KGSKLWI   76 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEE----ECCeEEE
Confidence            5678899999999999999999999999999886432 2334466889999999999999999999887    6688999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      |+||+++|+|.
T Consensus        77 v~e~~~~~~L~   87 (274)
T cd06609          77 IMEYCGGGSCL   87 (274)
T ss_pred             EEEeeCCCcHH
Confidence            99999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.37  E-value=2.1e-12  Score=96.41  Aligned_cols=87  Identities=32%  Similarity=0.510  Sum_probs=71.7

Q ss_pred             hhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      +...+.|++.+.||+|+||.||++... .+..+++|.+......   ...+.+|+.++++++|+||+++++++.     .
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~   72 (260)
T cd05067           2 EVPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVT-----Q   72 (260)
T ss_pred             ccchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEc-----c
Confidence            345678899999999999999999854 5677999988654332   356889999999999999999998763     4


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..+++|||+++|+|.
T Consensus        73 ~~~~~v~e~~~~~~L~   88 (260)
T cd05067          73 EPIYIITEYMENGSLV   88 (260)
T ss_pred             CCcEEEEEcCCCCCHH
Confidence            5689999999999885

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.37  E-value=4e-12  Score=98.17  Aligned_cols=82  Identities=26%  Similarity=0.327  Sum_probs=65.0

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHH-HHHhcCCCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEA-EMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      +.||+|+||.||++.+..++..+|+|.+....... .....+..|. .+++.++|+||+++++++.    ..+..|+|||
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~----~~~~~~lv~e   76 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ----TADKLYFVLD   76 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEE----cCCeEEEEEe
Confidence            36899999999999999999999999986543221 2223344444 4567889999999999887    7788999999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+++|+|.
T Consensus        77 ~~~~~~L~   84 (325)
T cd05602          77 YINGGELF   84 (325)
T ss_pred             CCCCCcHH
Confidence            99999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.37  E-value=3e-12  Score=100.66  Aligned_cols=86  Identities=28%  Similarity=0.297  Sum_probs=68.9

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec-CCceEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT-KRKYIVL  187 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~~~l  187 (199)
                      |++.+.||+|+||.||++.+..++..+|+|.+..........+.+.+|+.+++.++|+||+++++++..... .....|+
T Consensus         2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l   81 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV   81 (372)
T ss_pred             CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence            577899999999999999999999999999886433333445678899999999999999999998862110 0127899


Q ss_pred             EEeccCC
Q psy360          188 VTELMTS  194 (199)
Q Consensus       188 v~E~~~~  194 (199)
                      ||||+.+
T Consensus        82 v~e~~~~   88 (372)
T cd07853          82 VTELMQS   88 (372)
T ss_pred             Eeecccc
Confidence            9999974

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0193|consensus

Probab=99.37  E-value=9.3e-13  Score=104.98  Aligned_cols=93  Identities=30%  Similarity=0.349  Sum_probs=82.3

Q ss_pred             hhhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeee
Q psy360           98 KEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEV  177 (199)
Q Consensus        98 ~~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  177 (199)
                      ....|++..+.+.+..+||+|.||+||+|.+-+   .||||.+......++..+.|.+|+..+++-+|.||+=+.|||. 
T Consensus       383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~-  458 (678)
T KOG0193|consen  383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACM-  458 (678)
T ss_pred             cccccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhc-
Confidence            446777888888999999999999999998865   4899999888888888899999999999999999999999996 


Q ss_pred             eecCCceEEEEEeccCCCCCC
Q psy360          178 TLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~~~~~~~~lv~E~~~~G~L~  198 (199)
                          ++...||.-+|+|.+|.
T Consensus       459 ----~p~~AIiTqwCeGsSLY  475 (678)
T KOG0193|consen  459 ----NPPLAIITQWCEGSSLY  475 (678)
T ss_pred             ----CCceeeeehhccCchhh
Confidence                44459999999999885

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.36  E-value=1.7e-12  Score=98.23  Aligned_cols=86  Identities=22%  Similarity=0.327  Sum_probs=74.3

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      +|++.+.||+|+||.||+|.+..++..+++|.+..........+.+.+|+.++++++|+||+++++++.    ..+..++
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~i   77 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFR----RKGRLYL   77 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEE----ECCEEEE
Confidence            578889999999999999999999999999988654433444577899999999999999999999887    6788999


Q ss_pred             EEeccCCCCC
Q psy360          188 VTELMTSGTL  197 (199)
Q Consensus       188 v~E~~~~G~L  197 (199)
                      ||||++++.|
T Consensus        78 v~e~~~~~~l   87 (288)
T cd07833          78 VFEYVERTLL   87 (288)
T ss_pred             EEecCCCCHH
Confidence            9999998765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.36  E-value=3.6e-12  Score=94.84  Aligned_cols=87  Identities=26%  Similarity=0.426  Sum_probs=73.9

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLV  188 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv  188 (199)
                      |++.+.||+|++|.||++.+..++..+++|.+..........+.+.+|+.++++++|+|++++++.+..   .+...|++
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~lv   78 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG---EDGLLYIV   78 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC---CCCEEEEE
Confidence            678899999999999999998889999999987554455556778999999999999999999987641   34568999


Q ss_pred             EeccCCCCCC
Q psy360          189 TELMTSGTLK  198 (199)
Q Consensus       189 ~E~~~~G~L~  198 (199)
                      |||+++|+|.
T Consensus        79 ~e~~~~~~l~   88 (257)
T cd08223          79 MGFCEGGDLY   88 (257)
T ss_pred             ecccCCCcHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.36  E-value=3.6e-12  Score=98.10  Aligned_cols=82  Identities=20%  Similarity=0.284  Sum_probs=67.1

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      +.||+|+||.||++.+..++..+|+|.+...... ......+..|..++..+ +|+||+++++++.    ..+..|+|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~----~~~~~~lv~E   76 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQ----TKEHLFFVME   76 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEE----eCCEEEEEEC
Confidence            4689999999999999999999999998754321 22344567788777755 8999999999887    6789999999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+++|+|.
T Consensus        77 ~~~~g~L~   84 (316)
T cd05620          77 FLNGGDLM   84 (316)
T ss_pred             CCCCCcHH
Confidence            99999884

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0578|consensus

Probab=99.36  E-value=6.2e-13  Score=105.03  Aligned_cols=53  Identities=28%  Similarity=0.493  Sum_probs=45.3

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHH
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI   60 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~   60 (199)
                      ...+.+|||.|||||++. ..|+.|+||||||++++||+-|++||........+
T Consensus       425 KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAl  478 (550)
T KOG0578|consen  425 KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL  478 (550)
T ss_pred             ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHH
Confidence            345779999999999876 67999999999999999999999999875554444

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.36  E-value=3.2e-12  Score=97.01  Aligned_cols=85  Identities=25%  Similarity=0.426  Sum_probs=69.0

Q ss_pred             cccceeecCccceeEEEEEECC-----CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQ-----TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~-----~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      |++.+.||+|+||.||+|....     ....+++|.+... ......+.+.+|+.+++.++||||+++++.+.    ..+
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~   76 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKEN-ASSSELRDLLSEFNLLKQVNHPHVIKLYGACS----QDG   76 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCC-CCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe----cCC
Confidence            6778999999999999997643     2356788777533 23344567899999999999999999999887    677


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..+++|||+.+|+|.
T Consensus        77 ~~~lv~e~~~~~~L~   91 (290)
T cd05045          77 PLLLIVEYAKYGSLR   91 (290)
T ss_pred             CcEEEEEecCCCCHH
Confidence            889999999999884

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.36  E-value=2.4e-12  Score=96.34  Aligned_cols=86  Identities=31%  Similarity=0.472  Sum_probs=69.9

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ....+|++.+.||+|+||.||++.+..+. .+++|.+......   .+.+.+|+.+++.++|+||+++++++.     .+
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~-----~~   73 (262)
T cd05071           3 IPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVS-----EE   73 (262)
T ss_pred             CChHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEEC-----CC
Confidence            34567899999999999999999876554 5899988643322   346889999999999999999998763     45


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus        74 ~~~lv~e~~~~~~L~   88 (262)
T cd05071          74 PIYIVTEYMSKGSLL   88 (262)
T ss_pred             CcEEEEEcCCCCcHH
Confidence            579999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.36  E-value=4.6e-12  Score=94.53  Aligned_cols=86  Identities=27%  Similarity=0.351  Sum_probs=75.0

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      +|++.+.||+|++|.||++.+..++..+++|.+...... ...+.+.+|+..+.+++|+||+++++++.    ..+..++
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~l   76 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFY----KEGEISI   76 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc----cCCeEEE
Confidence            577889999999999999999999999999988654322 44577999999999999999999999887    6789999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ||||+++++|.
T Consensus        77 v~e~~~~~~L~   87 (264)
T cd06623          77 VLEYMDGGSLA   87 (264)
T ss_pred             EEEecCCCcHH
Confidence            99999999885

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.36  E-value=3.9e-12  Score=95.22  Aligned_cols=86  Identities=26%  Similarity=0.396  Sum_probs=71.9

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccC-------HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-------KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      |.+...||+|+||.||+|.+..++..+++|.+......       ....+.+.+|+.++++++|+||+++++++.    .
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~   77 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSL----D   77 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE----e
Confidence            56678999999999999998888999999987543221       123356889999999999999999999887    6


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..++||||+++++|.
T Consensus        78 ~~~~~lv~e~~~~~~L~   94 (267)
T cd06628          78 ADHLNIFLEYVPGGSVA   94 (267)
T ss_pred             CCccEEEEEecCCCCHH
Confidence            78899999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.36  E-value=3.7e-12  Score=98.57  Aligned_cols=87  Identities=20%  Similarity=0.292  Sum_probs=70.9

Q ss_pred             ccccceeecCccceeEEEEEEC---CCCcEEEEEEecccccC--HHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecC
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDT---QTGVAVAWCELQEKKLN--KAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~---~~~~~~a~k~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  181 (199)
                      +|++.+.||+|+||.||++...   .++..+|+|.+......  ....+.+..|+.++..+ +|+||+++++++.    .
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----~   76 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQ----T   76 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEe----c
Confidence            3678899999999999998753   47889999998643322  22345678899999999 5999999999887    7


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..++||||+++|+|.
T Consensus        77 ~~~~~lv~e~~~~g~L~   93 (332)
T cd05614          77 EAKLHLILDYVSGGEMF   93 (332)
T ss_pred             CCEEEEEEeCCCCCcHH
Confidence            78899999999999874

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.35  E-value=4.1e-12  Score=96.96  Aligned_cols=85  Identities=27%  Similarity=0.371  Sum_probs=71.0

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|.+.+.||+|+||.||+|.+..++..+|+|.+..... ......+.+|+.++++++|+||+++++++.    ..+..+
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~----~~~~~~   80 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIH----TEKSLT   80 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc-cCchhHHHHHHHHHHhcCCCCcceEEEEEe----cCCeEE
Confidence            457889999999999999999999999999998854321 122345778999999999999999999987    678899


Q ss_pred             EEEeccCCCCC
Q psy360          187 LVTELMTSGTL  197 (199)
Q Consensus       187 lv~E~~~~G~L  197 (199)
                      +||||+++ +|
T Consensus        81 lv~e~~~~-~l   90 (301)
T cd07873          81 LVFEYLDK-DL   90 (301)
T ss_pred             EEEecccc-CH
Confidence            99999974 54

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.35  E-value=4.7e-12  Score=96.15  Aligned_cols=91  Identities=24%  Similarity=0.374  Sum_probs=74.2

Q ss_pred             hhcccccccceeecCccceeEEEEEECCC-----CcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQT-----GVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWE  176 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~-----~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~  176 (199)
                      ....+.|++.+.||+|+||.||++.....     ...+++|.+... ........+.+|+.++.++ +|+||+++++++.
T Consensus         8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   86 (293)
T cd05053           8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT   86 (293)
T ss_pred             ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCC-CCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence            34556788999999999999999986543     367899988643 2334456688999999999 7999999999887


Q ss_pred             eeecCCceEEEEEeccCCCCCC
Q psy360          177 VTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       177 ~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                          ..+..+++|||+++|+|.
T Consensus        87 ----~~~~~~li~e~~~~~~L~  104 (293)
T cd05053          87 ----QEGPLYVVVEYAAHGNLR  104 (293)
T ss_pred             ----CCCCeEEEEEeCCCCcHH
Confidence                677899999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.35  E-value=4e-12  Score=96.07  Aligned_cols=84  Identities=29%  Similarity=0.438  Sum_probs=70.5

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLV  188 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv  188 (199)
                      |++.+.||+|+||.||+|.+..++..+++|.+..........+.+.+|+.++++++|+||+++++++.    .++..++|
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~~v   77 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM----QESRLYLI   77 (285)
T ss_pred             ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe----eCCeEEEE
Confidence            67788999999999999999999999999988643322223456788999999999999999999987    67889999


Q ss_pred             EeccCCCCC
Q psy360          189 TELMTSGTL  197 (199)
Q Consensus       189 ~E~~~~G~L  197 (199)
                      |||+++ +|
T Consensus        78 ~e~~~~-~l   85 (285)
T cd07861          78 FEFLSM-DL   85 (285)
T ss_pred             EecCCC-CH
Confidence            999984 44

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.35  E-value=3.4e-12  Score=96.59  Aligned_cols=89  Identities=31%  Similarity=0.413  Sum_probs=72.1

Q ss_pred             cccccceeecCccceeEEEEEE----CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLD----TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~----~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      +.|++.+.||+|+||.||.+.+    ..++..+++|.+... ......+.+.+|+.+++.++|+||+++.+++..  ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~   80 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE-SGGNHIADLKKEIEILRNLYHENIVKYKGICTE--DGG   80 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcc-ccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEec--CCC
Confidence            4678899999999999999974    456788999988533 233445679999999999999999999998862  124


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ...++||||++||+|.
T Consensus        81 ~~~~lv~e~~~g~~L~   96 (284)
T cd05079          81 NGIKLIMEFLPSGSLK   96 (284)
T ss_pred             CceEEEEEccCCCCHH
Confidence            6789999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.35  E-value=3.6e-12  Score=96.15  Aligned_cols=89  Identities=33%  Similarity=0.466  Sum_probs=72.5

Q ss_pred             cccccceeecCccceeEEEEEEC----CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDT----QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~----~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      +++++.+.||+|+||.||++.+.    .++..+|+|.+...... ...+.+.+|+.+++.+.|+||+++++++..  ...
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~--~~~   80 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEK--PGG   80 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeec--CCC
Confidence            56788899999999999999854    34788999998644322 345679999999999999999999998762  135


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ...++||||+++|+|.
T Consensus        81 ~~~~lv~e~~~~~~l~   96 (284)
T cd05038          81 RSLRLIMEYLPSGSLR   96 (284)
T ss_pred             CceEEEEecCCCCCHH
Confidence            6789999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.35  E-value=4.5e-12  Score=97.13  Aligned_cols=83  Identities=27%  Similarity=0.348  Sum_probs=70.0

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|.+.+.||+|+||.||++.+..++..+|+|.+..... ......+.+|+.++++++|+||+++++++.    .++..+
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~   80 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVH----TDKSLT   80 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc-CCcchhHHHHHHHHHhCCCCCcceEEEEEe----eCCeEE
Confidence            457889999999999999999999999999998864321 122345778999999999999999999887    678899


Q ss_pred             EEEeccCC
Q psy360          187 LVTELMTS  194 (199)
Q Consensus       187 lv~E~~~~  194 (199)
                      +||||+++
T Consensus        81 lv~e~~~~   88 (309)
T cd07872          81 LVFEYLDK   88 (309)
T ss_pred             EEEeCCCC
Confidence            99999985

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0662|consensus

Probab=99.35  E-value=4.2e-13  Score=92.42  Aligned_cols=82  Identities=26%  Similarity=0.311  Sum_probs=69.6

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      .|+..++||+|.||+||++++..+.+.||+|.++.....+.-.....+|+-+++.++|.|||++++.-+    .++.+-+
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlh----sdkkltl   78 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH----SDKKLTL   78 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhc----cCceeEE
Confidence            355668899999999999999999999999998755433333466899999999999999999999776    6788899


Q ss_pred             EEeccC
Q psy360          188 VTELMT  193 (199)
Q Consensus       188 v~E~~~  193 (199)
                      |+|||.
T Consensus        79 vfe~cd   84 (292)
T KOG0662|consen   79 VFEFCD   84 (292)
T ss_pred             eHHHhh
Confidence            999996

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.35  E-value=5.1e-12  Score=94.54  Aligned_cols=85  Identities=29%  Similarity=0.517  Sum_probs=70.5

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccC----HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN----KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      |+..+.||+|+||.||++.. .++..+|+|.+......    ......+.+|+.++++++|+||+++++++.    ..+.
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~   76 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCL----DDNT   76 (265)
T ss_pred             ccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEee----cCCe
Confidence            56788999999999999975 46788999987643221    223456889999999999999999999987    6789


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .+++|||+++|+|.
T Consensus        77 ~~lv~e~~~~~~L~   90 (265)
T cd06631          77 ISIFMEFVPGGSIS   90 (265)
T ss_pred             EEEEEecCCCCcHH
Confidence            99999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.35  E-value=3e-12  Score=97.43  Aligned_cols=86  Identities=26%  Similarity=0.400  Sum_probs=73.7

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.+.||+|+||.||++.+..++..+++|.+...  .....+.+.+|+.++++++||||+++++++.    ..+..|
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~----~~~~~~   92 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ--QQPKKELIINEILVMRENKHPNIVNYLDSYL----VGDELW   92 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc--cchHHHHHHHHHHHHhhcCCCCeeehhheee----eCCcEE
Confidence            5678889999999999999998888899999987532  2223467889999999999999999999887    677899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +|+||+++|+|.
T Consensus        93 lv~e~~~~~~L~  104 (293)
T cd06647          93 VVMEYLAGGSLT  104 (293)
T ss_pred             EEEecCCCCcHH
Confidence            999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0591|consensus

Probab=99.35  E-value=5.3e-13  Score=97.67  Aligned_cols=60  Identities=22%  Similarity=0.363  Sum_probs=49.3

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhcc
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI   69 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~   69 (199)
                      ..+.+|||.||.||.+. ..|+.|||+||+||++|||+.-+.||.+. +.-++-++|..+.+
T Consensus       185 A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-n~~~L~~KI~qgd~  245 (375)
T KOG0591|consen  185 AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-NLLSLCKKIEQGDY  245 (375)
T ss_pred             HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-cHHHHHHHHHcCCC
Confidence            44679999999999887 56999999999999999999999999874 55455456665544

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.35  E-value=2.9e-12  Score=96.43  Aligned_cols=87  Identities=26%  Similarity=0.398  Sum_probs=71.3

Q ss_pred             cccccceeecCccceeEEEEEECC-----CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQ-----TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~-----~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      ++|+....||+|+||.||++....     ....+++|.+.... .....+.+.+|+.++++++|+||+++++++.    .
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~   79 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCR----E   79 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEEC----C
Confidence            578889999999999999998643     34678888775322 2224567999999999999999999999887    6


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      ....++||||+++|+|.
T Consensus        80 ~~~~~lv~e~~~~~~L~   96 (275)
T cd05046          80 AEPHYMILEYTDLGDLK   96 (275)
T ss_pred             CCcceEEEEecCCCcHH
Confidence            67889999999999885

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.35  E-value=3.2e-12  Score=97.82  Aligned_cols=91  Identities=23%  Similarity=0.331  Sum_probs=73.2

Q ss_pred             hhcccccccceeecCccceeEEEEEECC-------CCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQ-------TGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGY  174 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~-------~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~  174 (199)
                      +...+.|.+.+.||+|+||.||++.+..       ....+|+|.+... ........+.+|+.++..+ +|+||++++++
T Consensus        14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (307)
T cd05098          14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGA   92 (307)
T ss_pred             eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCC-CChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence            3445678999999999999999997643       2346889888643 2334456688899999999 79999999998


Q ss_pred             eeeeecCCceEEEEEeccCCCCCC
Q psy360          175 WEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       175 ~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      +.    ..+..|+||||+++|+|.
T Consensus        93 ~~----~~~~~~lv~e~~~~~~L~  112 (307)
T cd05098          93 CT----QDGPLYVIVEYASKGNLR  112 (307)
T ss_pred             Ee----cCCceEEEEecCCCCcHH
Confidence            87    677899999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0690|consensus

Probab=99.34  E-value=1e-12  Score=98.10  Aligned_cols=65  Identities=23%  Similarity=0.471  Sum_probs=54.0

Q ss_pred             eeeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhccccC
Q psy360            7 YVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSA   72 (199)
Q Consensus         7 ~~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~~~~   72 (199)
                      ..+.+.||||.|+|||++. ..|+.++|+|.+||++|||++|+.||+. .+.+.++.-|+...+..+
T Consensus       323 ~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn-~dh~kLFeLIl~ed~kFP  388 (516)
T KOG0690|consen  323 DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYN-KDHEKLFELILMEDLKFP  388 (516)
T ss_pred             ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccc-cchhHHHHHHHhhhccCC
Confidence            3466899999999999998 5699999999999999999999999987 566667666666555443

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=3.9e-12  Score=95.80  Aligned_cols=86  Identities=28%  Similarity=0.483  Sum_probs=72.9

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC---CCCccceeeeeeeeecCCce
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ---HPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~~~  184 (199)
                      .|+..+.||+|+||.||+|.+..++..+++|.+... ......+.+.+|+.++++++   |+|++++++++.    ....
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~----~~~~   76 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLD-TPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL----KGPR   76 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCC-CCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee----eCCE
Confidence            467788999999999999999999999999988543 23334566888999999986   999999999887    6778


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++++|.
T Consensus        77 ~~lv~e~~~~~~L~   90 (277)
T cd06917          77 LWIIMEYAEGGSVR   90 (277)
T ss_pred             EEEEEecCCCCcHH
Confidence            99999999999874

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.34  E-value=3.4e-12  Score=95.20  Aligned_cols=84  Identities=33%  Similarity=0.474  Sum_probs=69.4

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.+.||+|+||.||.+.+.+ +..+|+|.+......   .+.+.+|+.++.+++||||+++++++.    ..+..+
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~   75 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCT----KQRPIY   75 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEc----cCCCcE
Confidence            457888999999999999997654 446899987643322   356889999999999999999999887    677889


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        76 lv~e~~~~~~l~   87 (256)
T cd05113          76 IVTEYMSNGCLL   87 (256)
T ss_pred             EEEEcCCCCcHH
Confidence            999999999874

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=7.7e-12  Score=93.63  Aligned_cols=90  Identities=28%  Similarity=0.445  Sum_probs=73.5

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccc---cCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK---LNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      .+|++.+.||+|+||.||++.+..++..+++|.+....   ........+.+|+.++++++|+||+++++++.+  ....
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~--~~~~   79 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRD--PEEK   79 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEc--CCCC
Confidence            46788999999999999999999999999999874321   123345678899999999999999999998752  1345


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..+++|||+++++|.
T Consensus        80 ~~~~v~e~~~~~~L~   94 (264)
T cd06653          80 KLSIFVEYMPGGSIK   94 (264)
T ss_pred             EEEEEEEeCCCCcHH
Confidence            688999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.34  E-value=4.1e-12  Score=96.36  Aligned_cols=87  Identities=33%  Similarity=0.541  Sum_probs=72.0

Q ss_pred             ccccccceeecCccceeEEEEEE-----CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLD-----TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~-----~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      ++.|.+.+.||+|+||+||++..     ..++..+++|.+...  .....+.+.+|+.++.+++|+||+++++++.    
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----   77 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCV----   77 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEe----
Confidence            35688899999999999999975     234567888887532  3445667999999999999999999999887    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      ..+..++||||+++|+|.
T Consensus        78 ~~~~~~lv~e~~~~~~L~   95 (288)
T cd05093          78 EGDPLIMVFEYMKHGDLN   95 (288)
T ss_pred             cCCccEEEEEcCCCCCHH
Confidence            678899999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.34  E-value=7.2e-12  Score=94.06  Aligned_cols=89  Identities=25%  Similarity=0.361  Sum_probs=69.8

Q ss_pred             ccceeecCccceeEEEEEECCCCc--EEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee--cCCceE
Q psy360          110 KFEEEIGRGSFKTVYRGLDTQTGV--AVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL--TKRKYI  185 (199)
Q Consensus       110 ~~~~~lG~G~fg~v~~~~~~~~~~--~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~~~~  185 (199)
                      .+.+.||+|+||.||+|.+..++.  .+|+|.+..........+.+.+|+.+++.++|+||+++++++....  ......
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            456889999999999998876664  5888887654445556778999999999999999999999764211  112357


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      +++|||+++|+|.
T Consensus        82 ~~v~e~~~~~~l~   94 (272)
T cd05075          82 VVILPFMKHGDLH   94 (272)
T ss_pred             EEEEEeCCCCcHH
Confidence            8999999999874

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.34  E-value=8.1e-12  Score=92.71  Aligned_cols=87  Identities=29%  Similarity=0.494  Sum_probs=76.1

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      +|++.+.||+|+||.||++.+..++..+++|.+..........+.+.+|+++++.++|+|++++.+.+.    .....++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~----~~~~~~l   76 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFE----EKGKLCI   76 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEe----cCCEEEE
Confidence            367788999999999999999888999999998765555556677899999999999999999999877    6688999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      |+||+++++|.
T Consensus        77 v~e~~~~~~L~   87 (258)
T cd08215          77 VMEYADGGDLS   87 (258)
T ss_pred             EEEecCCCcHH
Confidence            99999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.34  E-value=4.6e-12  Score=95.06  Aligned_cols=80  Identities=30%  Similarity=0.399  Sum_probs=63.9

Q ss_pred             eecCccceeEEEEEECC--CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEec
Q psy360          114 EIGRGSFKTVYRGLDTQ--TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTEL  191 (199)
Q Consensus       114 ~lG~G~fg~v~~~~~~~--~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~  191 (199)
                      .||+|+||.||+|....  ....+++|.+... ........+.+|+.+++.++|+||+++++++.    .....++||||
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~----~~~~~~lv~e~   76 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRAS-ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCI----ESIPYLLVLEF   76 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCcc-CChHHHHHHHHHHHHHHhCCCCCcceEEEEEC----CCCceEEEEEe
Confidence            58999999999996432  3446777776432 23344567889999999999999999999887    67889999999


Q ss_pred             cCCCCCC
Q psy360          192 MTSGTLK  198 (199)
Q Consensus       192 ~~~G~L~  198 (199)
                      +++|+|.
T Consensus        77 ~~~g~L~   83 (269)
T cd05042          77 CPLGDLK   83 (269)
T ss_pred             CCCCcHH
Confidence            9999985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.34  E-value=5.8e-12  Score=93.43  Aligned_cols=80  Identities=34%  Similarity=0.541  Sum_probs=66.6

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEecc
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELM  192 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~~  192 (199)
                      +.||+|+||.||++... .+..+++|.+... ........+.+|+.+++.++|+||+++++++.    ..+..++||||+
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~lv~e~~   74 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKED-LPQELKIKFLSEARILKQYDHPNIVKLIGVCT----QRQPIYIVMELV   74 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCc-CCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEe----cCCccEEEEECC
Confidence            36899999999999854 5778899987543 23444557889999999999999999999887    677899999999


Q ss_pred             CCCCCC
Q psy360          193 TSGTLK  198 (199)
Q Consensus       193 ~~G~L~  198 (199)
                      ++|+|.
T Consensus        75 ~~~~L~   80 (250)
T cd05085          75 PGGDFL   80 (250)
T ss_pred             CCCcHH
Confidence            999874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.34  E-value=4.5e-12  Score=95.58  Aligned_cols=80  Identities=30%  Similarity=0.384  Sum_probs=67.5

Q ss_pred             ecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEeccC
Q psy360          115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMT  193 (199)
Q Consensus       115 lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~~~  193 (199)
                      ||+|+||+||++.+..++..+++|.+....... .....+.+|+.+++.++||||+++++++.    ..+..|+||||++
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~lv~e~~~   76 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFE----TKDDLCLVMTLMN   76 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEe----cCCeEEEEEecCC
Confidence            689999999999999999999999986543222 23455778999999999999999999887    6788999999999


Q ss_pred             CCCCC
Q psy360          194 SGTLK  198 (199)
Q Consensus       194 ~G~L~  198 (199)
                      +|+|.
T Consensus        77 ~~~L~   81 (277)
T cd05577          77 GGDLK   81 (277)
T ss_pred             CCcHH
Confidence            99874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=9.2e-12  Score=92.34  Aligned_cols=86  Identities=33%  Similarity=0.595  Sum_probs=75.9

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLV  188 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv  188 (199)
                      |++.+.||+|++|.||++.+..++..+++|.+..........+.+.+|++++++++|+|++++++++.    ..+..+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~v   77 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE----TSDSLYII   77 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE----eCCEEEEE
Confidence            67789999999999999999989999999998766554456678999999999999999999999887    67889999


Q ss_pred             EeccCCCCCC
Q psy360          189 TELMTSGTLK  198 (199)
Q Consensus       189 ~E~~~~G~L~  198 (199)
                      |||+++++|.
T Consensus        78 ~e~~~~~~L~   87 (254)
T cd06627          78 LEYAENGSLR   87 (254)
T ss_pred             EecCCCCcHH
Confidence            9999998874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.34  E-value=6.5e-12  Score=95.74  Aligned_cols=87  Identities=28%  Similarity=0.423  Sum_probs=75.1

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ...|+..+.||.|+||.||++.+..++..+++|.+.....  ...+.+.+|+.+++.++|+||+++++++.    ..+..
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----~~~~~   91 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFL----VGDEL   91 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEe----cCceE
Confidence            3568899999999999999999999999999998864322  23466889999999999999999999887    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++|+||+++|+|.
T Consensus        92 ~lv~e~~~~~~L~  104 (296)
T cd06655          92 FVVMEYLAGGSLT  104 (296)
T ss_pred             EEEEEecCCCcHH
Confidence            9999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.34  E-value=4e-12  Score=95.04  Aligned_cols=86  Identities=28%  Similarity=0.406  Sum_probs=74.4

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      .|+..+.||+|+||.||++.+..++..+++|.+.... .......+.+|+.++++++|+||+++++++.    ..+..++
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~----~~~~~~l   76 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI-NEAIQKQILRELDILHKCNSPYIVGFYGAFY----NNGDISI   76 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc-ChHHHHHHHHHHHHHHHCCCCchhhhheeee----cCCEEEE
Confidence            4677889999999999999999999999999886543 2345567899999999999999999999887    6788999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ++||+++++|.
T Consensus        77 v~e~~~~~~L~   87 (265)
T cd06605          77 CMEYMDGGSLD   87 (265)
T ss_pred             EEEecCCCcHH
Confidence            99999998875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.34  E-value=4.6e-12  Score=95.11  Aligned_cols=87  Identities=29%  Similarity=0.468  Sum_probs=69.9

Q ss_pred             ccccccceeecCccceeEEEEEECCC---CcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQT---GVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      .+.+.+.+.||+|+||.||+|.+...   ...+++|..... ......+.+.+|+.++++++|+||+++++++.     .
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~   78 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNC-TSPSVREKFLQEAYIMRQFDHPHIVKLIGVIT-----E   78 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCc-CCHHHHHHHHHHHHHHHhCCCCchhceeEEEc-----C
Confidence            45678889999999999999976543   456888877533 22445567999999999999999999999875     3


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..++||||+++|+|.
T Consensus        79 ~~~~lv~e~~~~~~L~   94 (270)
T cd05056          79 NPVWIVMELAPLGELR   94 (270)
T ss_pred             CCcEEEEEcCCCCcHH
Confidence            5578999999999885

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.34  E-value=2.5e-12  Score=112.38  Aligned_cols=81  Identities=28%  Similarity=0.366  Sum_probs=67.9

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      .++....||+|+||.||+|.+..++..||+|.+......      ...|+..+++++|||||+++++|.    ..+..|+
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~----~~~~~~l  760 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCR----SEKGAYL  760 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEE----cCCCCEE
Confidence            456678899999999999999889999999988532211      224688899999999999999997    6778899


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      |||||++|+|.
T Consensus       761 v~Ey~~~g~L~  771 (968)
T PLN00113        761 IHEYIEGKNLS  771 (968)
T ss_pred             EEeCCCCCcHH
Confidence            99999999985

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.34  E-value=5.1e-12  Score=97.69  Aligned_cols=82  Identities=22%  Similarity=0.382  Sum_probs=70.5

Q ss_pred             eeecCc--cceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRG--SFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G--~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      ..||+|  +||+||++.+..++..||+|.+..........+.+.+|+.+++.++||||++++++|.    ..+..++|||
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~----~~~~~~~v~e   79 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFT----TGSWLWVISP   79 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEe----cCCceEEEEe
Confidence            456666  9999999999999999999998755545555678899999999999999999999987    6788999999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+.+|+|.
T Consensus        80 ~~~~~~l~   87 (328)
T cd08226          80 FMAYGSAN   87 (328)
T ss_pred             cccCCCHH
Confidence            99999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.33  E-value=8.2e-12  Score=94.93  Aligned_cols=88  Identities=28%  Similarity=0.395  Sum_probs=72.4

Q ss_pred             ccccccceeecCccceeEEEEEECCCC----------------cEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCcc
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTG----------------VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV  169 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~----------------~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv  169 (199)
                      .+.|++.+.||+|+||.||++.+...+                ..+++|.+... ......+.+.+|+.++++++|+||+
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~   82 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPD-ASDNAREDFLKEVKILSRLSDPNIA   82 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCc-cCHHHHHHHHHHHHHHHhcCCCCEe
Confidence            457888999999999999998765433                45788887643 2344567799999999999999999


Q ss_pred             ceeeeeeeeecCCceEEEEEeccCCCCCC
Q psy360          170 SFYGYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       170 ~l~~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++++++.    .++..+++|||+++|+|.
T Consensus        83 ~~~~~~~----~~~~~~lv~e~~~~~~L~  107 (296)
T cd05051          83 RLLGVCT----VDPPLCMIMEYMENGDLN  107 (296)
T ss_pred             EEEEEEe----cCCCcEEEEecCCCCCHH
Confidence            9999887    668899999999999874

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.33  E-value=1e-11  Score=93.06  Aligned_cols=90  Identities=29%  Similarity=0.416  Sum_probs=73.5

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEeccccc---CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL---NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      .+|+..+.||+|+||.||++.+..++..+++|.+.....   .......+.+|+.++++++|+||+++++++..  ....
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~   79 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD--RAEK   79 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc--CCCC
Confidence            357888999999999999999999999999998754322   22345678899999999999999999998752  1346


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..+++|||+++++|.
T Consensus        80 ~~~l~~e~~~~~~L~   94 (266)
T cd06651          80 TLTIFMEYMPGGSVK   94 (266)
T ss_pred             EEEEEEeCCCCCcHH
Confidence            789999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.33  E-value=4.9e-12  Score=94.17  Aligned_cols=84  Identities=32%  Similarity=0.455  Sum_probs=71.4

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.|++.+.||+|+||.||++...  +..+++|.+....   ...+.+.+|+.++++++|+||+++++++.    .....
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~   75 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDS---TAAQAFLAEASVMTTLRHPNLVQLLGVVL----QGNPL   75 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccch---hHHHHHHHHHHHHHhcCCcceeeeEEEEc----CCCCe
Confidence            456788999999999999999865  6788999886432   14567899999999999999999999887    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        76 ~~v~e~~~~~~L~   88 (256)
T cd05039          76 YIVTEYMAKGSLV   88 (256)
T ss_pred             EEEEEecCCCcHH
Confidence            9999999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG0584|consensus

Probab=99.33  E-value=6.6e-13  Score=106.07  Aligned_cols=61  Identities=72%  Similarity=1.125  Sum_probs=56.0

Q ss_pred             eeccCCCcccccccccccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhccc
Q psy360           10 IRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT   70 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~~   70 (199)
                      .++.|||.|||||+....|+..+||||||++++||+|+..|+..+.++.++++++..+..+
T Consensus       202 ksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP  262 (632)
T KOG0584|consen  202 KSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKP  262 (632)
T ss_pred             ceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCH
Confidence            3589999999999999999999999999999999999999999999999999988776443

>KOG0690|consensus

Probab=99.33  E-value=1.4e-12  Score=97.37  Aligned_cols=91  Identities=23%  Similarity=0.298  Sum_probs=78.0

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ..-++|.+++.||+|.||+|.+|+.+.+++.+|+|.+++... ..++..-...|-++|...+||.+..|--.|.    ..
T Consensus       165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQ----t~  240 (516)
T KOG0690|consen  165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQ----TQ  240 (516)
T ss_pred             eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhc----cC
Confidence            445678999999999999999999999999999999876543 3334555677999999999999999877676    78


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +++++||||+.||+|+
T Consensus       241 drlCFVMeyanGGeLf  256 (516)
T KOG0690|consen  241 DRLCFVMEYANGGELF  256 (516)
T ss_pred             ceEEEEEEEccCceEe
Confidence            9999999999999985

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.33  E-value=5.3e-12  Score=96.95  Aligned_cols=91  Identities=25%  Similarity=0.382  Sum_probs=72.8

Q ss_pred             hhcccccccceeecCccceeEEEEEEC-------CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDT-------QTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGY  174 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~-------~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~  174 (199)
                      ....+++.+.+.||+|+||.||++.+.       .....+++|.+... ........+.+|+.+++.+ +|+||++++++
T Consensus         8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~   86 (314)
T cd05099           8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDN-ATDKDLADLISEMELMKLIGKHKNIINLLGV   86 (314)
T ss_pred             cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCC-CChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence            344567889999999999999999753       23456888887633 2344456788999999999 69999999998


Q ss_pred             eeeeecCCceEEEEEeccCCCCCC
Q psy360          175 WEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       175 ~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      +.    .....+++|||+++|+|.
T Consensus        87 ~~----~~~~~~lv~e~~~~g~L~  106 (314)
T cd05099          87 CT----QEGPLYVIVEYAAKGNLR  106 (314)
T ss_pred             Ec----cCCceEEEEecCCCCcHH
Confidence            87    677899999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.33  E-value=4.7e-12  Score=96.77  Aligned_cols=91  Identities=24%  Similarity=0.381  Sum_probs=73.3

Q ss_pred             hhcccccccceeecCccceeEEEEEEC-------CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDT-------QTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGY  174 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~-------~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~  174 (199)
                      ....+.|.+.+.||+|+||.||++.+.       ..+..+++|.+... ......+.+.+|+.+++.+ +|+||++++++
T Consensus        11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~   89 (304)
T cd05101          11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGA   89 (304)
T ss_pred             cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc-cchHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence            345667889999999999999999742       23457888887533 2334456789999999999 79999999998


Q ss_pred             eeeeecCCceEEEEEeccCCCCCC
Q psy360          175 WEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       175 ~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      +.    .....|+||||+++|+|.
T Consensus        90 ~~----~~~~~~lv~e~~~~~~L~  109 (304)
T cd05101          90 CT----QDGPLYVIVEYASKGNLR  109 (304)
T ss_pred             Ee----cCCceEEEEecCCCCcHH
Confidence            87    677899999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.33  E-value=8.1e-12  Score=94.96  Aligned_cols=84  Identities=25%  Similarity=0.337  Sum_probs=71.2

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ++|++.+.||+|++|.||++.+..++..+++|.+............+.+|+.++++++|+||+++++++.    ..+..|
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~   77 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH----SEKRLY   77 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEe----cCCeEE
Confidence            4578889999999999999999989999999987544333333456888999999999999999999987    678899


Q ss_pred             EEEeccCC
Q psy360          187 LVTELMTS  194 (199)
Q Consensus       187 lv~E~~~~  194 (199)
                      +||||+++
T Consensus        78 lv~e~~~~   85 (294)
T PLN00009         78 LVFEYLDL   85 (294)
T ss_pred             EEEecccc
Confidence            99999964

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.33  E-value=6.5e-12  Score=94.90  Aligned_cols=87  Identities=34%  Similarity=0.521  Sum_probs=71.8

Q ss_pred             ccccccceeecCccceeEEEEEE-----CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLD-----TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~-----~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      .++++....||+|+||.||++..     ..++..+++|.+..  ......+.+.+|+.+++.++|+||+++++++.    
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----   77 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTVLQHQHIVRFYGVCT----   77 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCc--CCHHHHHHHHHHHHHHhcCCCCCCceEEEEEe----
Confidence            35678889999999999999864     23566788888753  24455678999999999999999999999887    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      .....+++|||+++|+|.
T Consensus        78 ~~~~~~lv~e~~~~~~L~   95 (280)
T cd05092          78 EGRPLLMVFEYMRHGDLN   95 (280)
T ss_pred             cCCceEEEEecCCCCCHH
Confidence            677889999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.33  E-value=1.1e-11  Score=92.00  Aligned_cols=86  Identities=33%  Similarity=0.499  Sum_probs=74.7

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC--ceEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR--KYIV  186 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~--~~~~  186 (199)
                      |+..+.||+|++|.||+|.+..++..+++|.+..........+.+.+|+.++++++|+||+++++.+.    ..  ...+
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~~   77 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSER----DEEKNTLN   77 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEe----cCCCCeEE
Confidence            56778999999999999999989999999998655444456678999999999999999999999886    45  7899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      ++|||+++++|.
T Consensus        78 lv~e~~~~~~L~   89 (260)
T cd06606          78 IFLEYVSGGSLS   89 (260)
T ss_pred             EEEEecCCCcHH
Confidence            999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.33  E-value=4e-12  Score=96.44  Aligned_cols=85  Identities=32%  Similarity=0.436  Sum_probs=71.1

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.+.||+|+||.||+|.+..++..+++|.+..... ......+.+|+.++++++|+||+++++++.    ..+..+
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----~~~~~~   79 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE-EGAPFTAIREASLLKDLKHANIVTLHDIIH----TKKTLT   79 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc-cCCchhHHHHHHHHhhCCCcceeeEEEEEe----cCCeEE
Confidence            567889999999999999999988899999999864321 112234678999999999999999999887    778999


Q ss_pred             EEEeccCCCCC
Q psy360          187 LVTELMTSGTL  197 (199)
Q Consensus       187 lv~E~~~~G~L  197 (199)
                      +||||+.+ +|
T Consensus        80 lv~e~~~~-~L   89 (291)
T cd07844          80 LVFEYLDT-DL   89 (291)
T ss_pred             EEEecCCC-CH
Confidence            99999985 55

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG1035|consensus

Probab=99.33  E-value=3.4e-12  Score=108.70  Aligned_cols=70  Identities=24%  Similarity=0.411  Sum_probs=61.7

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeee
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWE  176 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  176 (199)
                      ...|+.+..||+||||.||+++++-+|..+|+|++.... .......+.+|+.++++|+|||||+++..|.
T Consensus       478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWV  547 (1351)
T KOG1035|consen  478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWV  547 (1351)
T ss_pred             hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhh
Confidence            345788899999999999999999999999999997654 5556677999999999999999999998775

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.32  E-value=1.2e-11  Score=93.45  Aligned_cols=82  Identities=22%  Similarity=0.391  Sum_probs=66.3

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHH-HhcCCCCCccceeeeeeeeecCCceEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEM-LKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +|++.+.||+|+||.||++.+..++..+|+|.+........ ...+..|+.+ ++.++|+||+++++++.    ..+..|
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~iv~~~~~~~----~~~~~~   76 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE-QKRLLMDLDISMRSVDCPYTVTFYGALF----REGDVW   76 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH-HHHHHHHHHHHHHHcCCCCeeeeeEEEe----cCCcEE
Confidence            57888999999999999999999999999999865433332 3445556654 56678999999999887    677899


Q ss_pred             EEEeccCC
Q psy360          187 LVTELMTS  194 (199)
Q Consensus       187 lv~E~~~~  194 (199)
                      ++|||+++
T Consensus        77 lv~e~~~~   84 (283)
T cd06617          77 ICMEVMDT   84 (283)
T ss_pred             EEhhhhcc
Confidence            99999974

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.32  E-value=8.3e-12  Score=94.18  Aligned_cols=86  Identities=29%  Similarity=0.443  Sum_probs=70.6

Q ss_pred             cccccceeecCccceeEEEEEECCCCc----EEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGV----AVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~----~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ..|++.+.||+|+||.||+|.+..++.    .+++|.+.... .......+.+|+.++.+++|+||+++++++.    . 
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~-   80 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICL----S-   80 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEe----c-
Confidence            567888999999999999998765543    58888775432 2444567889999999999999999999886    3 


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ...++||||+++|+|.
T Consensus        81 ~~~~~v~e~~~~g~L~   96 (279)
T cd05057          81 SQVQLITQLMPLGCLL   96 (279)
T ss_pred             CceEEEEecCCCCcHH
Confidence            6789999999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.32  E-value=4.8e-12  Score=95.66  Aligned_cols=83  Identities=27%  Similarity=0.401  Sum_probs=70.1

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      +|+..+.||+|+||.||++.+..++..+++|.+..........+.+.+|+.++++++|+||+++++++.    ..+..++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----~~~~~~~   76 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH----TENKLYL   76 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcc----cCCcEEE
Confidence            367889999999999999999999999999988644333333456889999999999999999999887    6788999


Q ss_pred             EEeccCC
Q psy360          188 VTELMTS  194 (199)
Q Consensus       188 v~E~~~~  194 (199)
                      ||||+.+
T Consensus        77 v~e~~~~   83 (284)
T cd07860          77 VFEFLHQ   83 (284)
T ss_pred             Eeecccc
Confidence            9999964

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.32  E-value=7.2e-12  Score=93.41  Aligned_cols=80  Identities=31%  Similarity=0.456  Sum_probs=66.3

Q ss_pred             eecCccceeEEEEEE--CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEec
Q psy360          114 EIGRGSFKTVYRGLD--TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTEL  191 (199)
Q Consensus       114 ~lG~G~fg~v~~~~~--~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~  191 (199)
                      .||+|+||.||+|.+  ..++..+|+|.+..........+.+.+|+.+++.++|+||+++++++.     .+..++||||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~lv~e~   76 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-----AESWMLVMEL   76 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-----CCCcEEEEec
Confidence            589999999999964  456788999988654444455677999999999999999999999874     4567899999


Q ss_pred             cCCCCCC
Q psy360          192 MTSGTLK  198 (199)
Q Consensus       192 ~~~G~L~  198 (199)
                      +++|+|.
T Consensus        77 ~~~~~L~   83 (257)
T cd05116          77 AELGPLN   83 (257)
T ss_pred             CCCCcHH
Confidence            9999874

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.32  E-value=8.3e-12  Score=98.79  Aligned_cols=80  Identities=20%  Similarity=0.276  Sum_probs=69.0

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ....|++.+.||+|+||.||++.+..++..+|+|....        +.+.+|+.++++++||||+++++++.    ....
T Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~----~~~~  157 (391)
T PHA03212         90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFT----YNKF  157 (391)
T ss_pred             ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEE----ECCe
Confidence            34579999999999999999999999999999986432        34678999999999999999999887    6778


Q ss_pred             EEEEEeccCCCCC
Q psy360          185 IVLVTELMTSGTL  197 (199)
Q Consensus       185 ~~lv~E~~~~G~L  197 (199)
                      .++|||++. |+|
T Consensus       158 ~~lv~e~~~-~~L  169 (391)
T PHA03212        158 TCLILPRYK-TDL  169 (391)
T ss_pred             eEEEEecCC-CCH
Confidence            999999986 454

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.32  E-value=7.3e-12  Score=94.68  Aligned_cols=90  Identities=29%  Similarity=0.388  Sum_probs=71.1

Q ss_pred             ccccccceeecCccceeEEEEEE----CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLD----TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~----~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      .++++..+.||+|+||+||++..    ..++..+|+|.+... ........+.+|+.++++++||||+++++++..  ..
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~   79 (283)
T cd05080           3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRE-CGQQNTSGWKKEINILKTLYHENIVKYKGCCSE--QG   79 (283)
T ss_pred             hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccc-cChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--CC
Confidence            35668999999999999987643    356778999988643 233345678899999999999999999998752  13


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      ....++||||+++|+|.
T Consensus        80 ~~~~~lv~e~~~~~~l~   96 (283)
T cd05080          80 GKGLQLIMEYVPLGSLR   96 (283)
T ss_pred             CceEEEEecCCCCCCHH
Confidence            45789999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.32  E-value=9.1e-12  Score=97.29  Aligned_cols=91  Identities=23%  Similarity=0.242  Sum_probs=73.8

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee--cCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL--TKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~  182 (199)
                      ..+.|++.+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.++|+||+++++++....  ...
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            456789999999999999999999999999999998754444445567889999999999999999999875211  122


Q ss_pred             ceEEEEEeccCCC
Q psy360          183 KYIVLVTELMTSG  195 (199)
Q Consensus       183 ~~~~lv~E~~~~G  195 (199)
                      ...|+||||++++
T Consensus        95 ~~~~lv~e~~~~~  107 (355)
T cd07874          95 QDVYLVMELMDAN  107 (355)
T ss_pred             ceeEEEhhhhccc
Confidence            4679999999865

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.32  E-value=4.3e-12  Score=95.51  Aligned_cols=87  Identities=29%  Similarity=0.434  Sum_probs=74.7

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCC-CCCccceeeeeeeeecCCceE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~  185 (199)
                      +|.+.+.||+|+||.||++.+..++..+++|.+..... .....+.+.+|..+++++. |+||+++++++.    ..+..
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~----~~~~~   77 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ----DEENL   77 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhc----CCceE
Confidence            57888999999999999999999999999998865433 2334567889999999998 999999999886    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        78 ~lv~e~~~~~~L~   90 (280)
T cd05581          78 YFVLEYAPNGELL   90 (280)
T ss_pred             EEEEcCCCCCcHH
Confidence            9999999999885

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.32  E-value=1.2e-11  Score=96.91  Aligned_cols=91  Identities=21%  Similarity=0.226  Sum_probs=73.5

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee--cCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL--TKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~  182 (199)
                      ..++|++.+.||+|+||.||++.+..++..+|+|.+..........+.+.+|+.+++.++|+||+++++++....  ...
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            346789999999999999999999999999999998654434445567889999999999999999998775211  123


Q ss_pred             ceEEEEEeccCCC
Q psy360          183 KYIVLVTELMTSG  195 (199)
Q Consensus       183 ~~~~lv~E~~~~G  195 (199)
                      ...|+||||++++
T Consensus       102 ~~~~lv~e~~~~~  114 (364)
T cd07875         102 QDVYIVMELMDAN  114 (364)
T ss_pred             CeEEEEEeCCCCC
Confidence            4689999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.32  E-value=6.2e-12  Score=95.84  Aligned_cols=87  Identities=33%  Similarity=0.532  Sum_probs=70.5

Q ss_pred             cccccceeecCccceeEEEEEECCCCc--EEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCc
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGV--AVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~--~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~  183 (199)
                      +.|++.+.||+|+||+||+|....++.  .+++|.+.. .......+.+.+|+.+++++ +||||+++++++.    ..+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~----~~~   76 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKE-FASENDHRDFAGELEVLCKLGHHPNIINLLGACE----NRG   76 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccc-cCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEc----cCC
Confidence            467888999999999999998766654  467777642 22334456789999999999 7999999999887    677


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus        77 ~~~lv~e~~~~~~L~   91 (297)
T cd05089          77 YLYIAIEYAPYGNLL   91 (297)
T ss_pred             cceEEEEecCCCcHH
Confidence            899999999999874

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG0597|consensus

Probab=99.31  E-value=1.1e-12  Score=104.06  Aligned_cols=61  Identities=26%  Similarity=0.521  Sum_probs=50.1

Q ss_pred             cceeeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            5 KSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         5 ~~~~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ++++.+++.|||.|||||++. +.|+..+|.||+|||+||+.+|++||.. .+..+..+.|.+
T Consensus       153 ~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-~si~~Lv~~I~~  214 (808)
T KOG0597|consen  153 NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-RSITQLVKSILK  214 (808)
T ss_pred             CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-HHHHHHHHHHhc
Confidence            667788999999999999887 5699999999999999999999999975 333344444444

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.31  E-value=8.3e-12  Score=92.74  Aligned_cols=87  Identities=24%  Similarity=0.381  Sum_probs=75.6

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      +|++.+.||+|+||.||++.+..++..+++|.+............+.+|+.++++++|+||+++++++.    .....++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~   76 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFL----DGNKLCI   76 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhc----cCCEEEE
Confidence            367788999999999999999999999999998755545555677889999999999999999999876    6688999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ||||+++++|.
T Consensus        77 v~e~~~~~~L~   87 (256)
T cd08530          77 VMEYAPFGDLS   87 (256)
T ss_pred             EehhcCCCCHH
Confidence            99999999874

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG4236|consensus

Probab=99.31  E-value=4.9e-12  Score=99.95  Aligned_cols=79  Identities=29%  Similarity=0.523  Sum_probs=71.5

Q ss_pred             ceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEec
Q psy360          112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTEL  191 (199)
Q Consensus       112 ~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~  191 (199)
                      .+.||+|.||.||-|.++.+|+.||+|.+.+.++..+....+.+|+.||.+++||.||.|--.|+    ..+.+++|||-
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~E----T~ervFVVMEK  644 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFE----TPERVFVVMEK  644 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeec----CCceEEEEehh
Confidence            47899999999999999999999999999877766666678999999999999999999988887    88999999998


Q ss_pred             cCC
Q psy360          192 MTS  194 (199)
Q Consensus       192 ~~~  194 (199)
                      +.|
T Consensus       645 l~G  647 (888)
T KOG4236|consen  645 LHG  647 (888)
T ss_pred             hcc
Confidence            865

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.31  E-value=9.2e-12  Score=93.00  Aligned_cols=87  Identities=30%  Similarity=0.407  Sum_probs=71.0

Q ss_pred             hhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      +...+.+++.+.||+|+||.||++.+. .+..+++|.+...   ....+.+.+|+.++++++|+||+++++++.    . 
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~-   72 (260)
T cd05073           2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVT----K-   72 (260)
T ss_pred             cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEc----C-
Confidence            455678999999999999999999754 4456888877532   234567889999999999999999998875    4 


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ...+++|||+++|+|.
T Consensus        73 ~~~~~v~e~~~~~~L~   88 (260)
T cd05073          73 EPIYIITEFMAKGSLL   88 (260)
T ss_pred             CCeEEEEEeCCCCcHH
Confidence            6789999999999874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.31  E-value=6.8e-12  Score=93.51  Aligned_cols=84  Identities=36%  Similarity=0.534  Sum_probs=69.3

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ..+++.+.||+|+||.||++.+. .+..+++|.+......   ...+.+|+.+++.++|+||+++++++.    ..+..+
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~   75 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCT----KQRPIF   75 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEc----CCCceE
Confidence            34778899999999999999875 4567899987543322   245788999999999999999999887    677899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        76 lv~e~~~~~~L~   87 (256)
T cd05059          76 IVTEYMANGCLL   87 (256)
T ss_pred             EEEecCCCCCHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.31  E-value=7.8e-12  Score=92.95  Aligned_cols=84  Identities=26%  Similarity=0.471  Sum_probs=73.7

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.+.||+|+||.||++.+..++..+++|.+....    ..+.+.+|+.++++++|+||+++++++.    .....|
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~----~~~~~~   74 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYF----KNTDLW   74 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeee----cCCcEE
Confidence            56888899999999999999998888999999885432    2567999999999999999999999887    678899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +++||+++++|.
T Consensus        75 l~~e~~~~~~L~   86 (256)
T cd06612          75 IVMEYCGAGSVS   86 (256)
T ss_pred             EEEecCCCCcHH
Confidence            999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.31  E-value=8.6e-12  Score=92.95  Aligned_cols=80  Identities=33%  Similarity=0.522  Sum_probs=65.5

Q ss_pred             eeecCccceeEEEEEECCCC---cEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEE
Q psy360          113 EEIGRGSFKTVYRGLDTQTG---VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVT  189 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~---~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~  189 (199)
                      +.||+|+||.||+|.+....   ..+++|.+...... ...+.+.+|+.+++.++|+||+++++++.     .+..++||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~v~   74 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK-----GEPLMLVM   74 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-----CCceEEEE
Confidence            46899999999999765544   78999988654332 44567899999999999999999999774     45679999


Q ss_pred             eccCCCCCC
Q psy360          190 ELMTSGTLK  198 (199)
Q Consensus       190 E~~~~G~L~  198 (199)
                      ||+++|+|.
T Consensus        75 e~~~~~~L~   83 (257)
T cd05060          75 ELAPLGPLL   83 (257)
T ss_pred             EeCCCCcHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG0660|consensus

Probab=99.31  E-value=4.9e-12  Score=95.19  Aligned_cols=88  Identities=30%  Similarity=0.404  Sum_probs=73.8

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeee-eecCCce
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEV-TLTKRKY  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~~~  184 (199)
                      ..+|...+.||+|+||.|..+.+..++..||+|++..........++..+|+.+++.++|+||+.+.+.+.. ....-+.
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D  100 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND  100 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence            345566899999999999999999999999999997555455677889999999999999999999998763 2223567


Q ss_pred             EEEEEeccC
Q psy360          185 IVLVTELMT  193 (199)
Q Consensus       185 ~~lv~E~~~  193 (199)
                      +|+|+|+|+
T Consensus       101 vYiV~elMe  109 (359)
T KOG0660|consen  101 VYLVFELME  109 (359)
T ss_pred             eEEehhHHh
Confidence            999999995

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.30  E-value=7.8e-12  Score=94.45  Aligned_cols=84  Identities=30%  Similarity=0.429  Sum_probs=70.3

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      +|+..+.||+|++|.||+|.+..++..+++|.+..... ....+.+.+|+.++++++|+||+++++++.    ..+..++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----~~~~~~l   75 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIH----TENKLML   75 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEe----eCCcEEE
Confidence            36788999999999999999999999999998864322 222355778999999999999999999987    6778899


Q ss_pred             EEeccCCCCC
Q psy360          188 VTELMTSGTL  197 (199)
Q Consensus       188 v~E~~~~G~L  197 (199)
                      ||||+++ +|
T Consensus        76 v~e~~~~-~l   84 (284)
T cd07836          76 VFEYMDK-DL   84 (284)
T ss_pred             EEecCCc-cH
Confidence            9999985 44

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.30  E-value=7.7e-12  Score=93.39  Aligned_cols=86  Identities=30%  Similarity=0.456  Sum_probs=69.7

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ...+.|++.+.||+|+||.||++.+. .+..+++|.+......   .+.+.+|+.++++++|+|++++++++.     ..
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~-----~~   73 (260)
T cd05070           3 IPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVS-----EE   73 (260)
T ss_pred             CchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEEC-----CC
Confidence            34567899999999999999999765 4556889888654332   245889999999999999999998764     45


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..+++|||+++|+|.
T Consensus        74 ~~~lv~e~~~~~~L~   88 (260)
T cd05070          74 PIYIVTEYMSKGSLL   88 (260)
T ss_pred             CcEEEEEecCCCcHH
Confidence            579999999999874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.30  E-value=1.1e-11  Score=92.53  Aligned_cols=79  Identities=32%  Similarity=0.519  Sum_probs=64.2

Q ss_pred             eecCccceeEEEEEEC--CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEec
Q psy360          114 EIGRGSFKTVYRGLDT--QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTEL  191 (199)
Q Consensus       114 ~lG~G~fg~v~~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~  191 (199)
                      .||+|+||.||+|.+.  ..+..+|+|.+... ......+.+.+|+.++++++|+||+++++++.     .+..++||||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-----~~~~~lv~e~   75 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNE-NEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-----AEALMLVMEM   75 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccc-cChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-----CCCeEEEEEe
Confidence            3899999999999764  45567899987543 23344567999999999999999999999874     4567999999


Q ss_pred             cCCCCCC
Q psy360          192 MTSGTLK  198 (199)
Q Consensus       192 ~~~G~L~  198 (199)
                      +++|+|.
T Consensus        76 ~~~~~L~   82 (257)
T cd05115          76 ASGGPLN   82 (257)
T ss_pred             CCCCCHH
Confidence            9999885

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.30  E-value=1.3e-11  Score=92.63  Aligned_cols=92  Identities=29%  Similarity=0.484  Sum_probs=75.1

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeee--c
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTL--T  180 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~--~  180 (199)
                      ...++|++.+.||+|+||.||++.+..++..+++|.+....   ...+.+.+|+.+++++ .|+||+++++++....  .
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~   79 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE---DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG   79 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence            45578999999999999999999998888999999875432   2346688999999999 6999999999886321  1


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      .....++||||+++++|.
T Consensus        80 ~~~~~~lv~e~~~~~~L~   97 (275)
T cd06608          80 NDDQLWLVMELCGGGSVT   97 (275)
T ss_pred             cceEEEEEEEcCCCCcHH
Confidence            245689999999998874

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.30  E-value=5.3e-12  Score=96.04  Aligned_cols=87  Identities=25%  Similarity=0.389  Sum_probs=73.6

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+++.....||+|+||.||++.+..++..+++|.+...  .....+.+.+|+.+++.++|+||+++++.+.    ..+..
T Consensus        21 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~----~~~~~   94 (292)
T cd06658          21 REYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR--KQQRRELLFNEVVIMRDYHHENVVDMYNSYL----VGDEL   94 (292)
T ss_pred             HHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc--hHHHHHHHHHHHHHHHhCCCCcHHHHHHhee----cCCeE
Confidence            34556667899999999999999889999999988532  2334567889999999999999999999887    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        95 ~lv~e~~~~~~L~  107 (292)
T cd06658          95 WVVMEFLEGGALT  107 (292)
T ss_pred             EEEEeCCCCCcHH
Confidence            9999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.30  E-value=1.1e-11  Score=93.16  Aligned_cols=80  Identities=30%  Similarity=0.335  Sum_probs=63.0

Q ss_pred             eecCccceeEEEEEECCC--CcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEec
Q psy360          114 EIGRGSFKTVYRGLDTQT--GVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTEL  191 (199)
Q Consensus       114 ~lG~G~fg~v~~~~~~~~--~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~  191 (199)
                      .||+|+||.||++.....  ...+++|.+... ......+.+.+|+.+++.++||||+++++.|.    .....|+||||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~----~~~~~~lv~e~   76 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKAN-ASSKEQNEFLQQGDPYRILQHPNILQCLGQCV----EAIPYLLVFEY   76 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCC-CChHHHHHHHHHHHHHhccCCcchhheEEEec----CCCccEEEEec
Confidence            589999999999964332  234556665432 22345678999999999999999999999887    67788999999


Q ss_pred             cCCCCCC
Q psy360          192 MTSGTLK  198 (199)
Q Consensus       192 ~~~G~L~  198 (199)
                      +++|+|.
T Consensus        77 ~~~~~L~   83 (268)
T cd05086          77 CELGDLK   83 (268)
T ss_pred             CCCCcHH
Confidence            9999985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0614|consensus

Probab=99.30  E-value=2.5e-12  Score=100.94  Aligned_cols=63  Identities=25%  Similarity=0.460  Sum_probs=52.5

Q ss_pred             CcceeeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360            4 NKSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus         4 ~~~~~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      .++..++++||||.|+|||++. +.++.++|.|++|++++||++|.+||.. .++-..+..|++.
T Consensus       571 ~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~-~dpmktYn~ILkG  634 (732)
T KOG0614|consen  571 GSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSG-VDPMKTYNLILKG  634 (732)
T ss_pred             ccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCC-CchHHHHHHHHhh
Confidence            4667789999999999999664 7799999999999999999999999987 4555556666553

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.30  E-value=1.4e-11  Score=91.64  Aligned_cols=84  Identities=31%  Similarity=0.546  Sum_probs=71.2

Q ss_pred             ccceeecCccceeEEEEEECCCC----cEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          110 KFEEEIGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       110 ~~~~~lG~G~fg~v~~~~~~~~~----~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ++.+.||+|+||.||++.+...+    ..+++|.+.... .....+.+..|+.++..++|+||+++++++.    ..+..
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~   76 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-DEQQIEEFLREARIMRKLDHPNIVKLLGVCT----EEEPL   76 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-ChHHHHHHHHHHHHHHhcCCCchheEEEEEc----CCCee
Confidence            56788999999999999887765    889999985432 2335677899999999999999999999887    66889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      +++|||+++|+|.
T Consensus        77 ~~i~e~~~~~~l~   89 (258)
T smart00219       77 MIVMEYMEGGDLL   89 (258)
T ss_pred             EEEEeccCCCCHH
Confidence            9999999999874

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG0577|consensus

Probab=99.30  E-value=9.2e-13  Score=105.14  Aligned_cols=84  Identities=25%  Similarity=0.361  Sum_probs=72.3

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ..|..++.||.|+||.||.+++..+...||+|++.-... ....=++++.|+..|.+++|||++.+.|||.    .....
T Consensus        26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyL----re~Ta  101 (948)
T KOG0577|consen   26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYL----REHTA  101 (948)
T ss_pred             HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceee----ccchH
Confidence            457778899999999999999999999999999865432 2334567899999999999999999999997    77888


Q ss_pred             EEEEeccCC
Q psy360          186 VLVTELMTS  194 (199)
Q Consensus       186 ~lv~E~~~~  194 (199)
                      |||||||-|
T Consensus       102 WLVMEYClG  110 (948)
T KOG0577|consen  102 WLVMEYCLG  110 (948)
T ss_pred             HHHHHHHhc
Confidence            999999975

>KOG0201|consensus

Probab=99.29  E-value=1.3e-12  Score=100.53  Aligned_cols=49  Identities=27%  Similarity=0.461  Sum_probs=43.4

Q ss_pred             eeeeeccCCCcccccccccc-cCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360            7 YVNIRTQRTPEFMAPEMYEE-HYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus         7 ~~~~~~~gt~~y~ape~~~~-~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ....+.+||+.|||||+++. .|+.|.|+||+|++.+||.+|.+|+....
T Consensus       166 ~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~h  215 (467)
T KOG0201|consen  166 KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLH  215 (467)
T ss_pred             hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccC
Confidence            34568899999999999984 69999999999999999999999987543

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.29  E-value=1.3e-11  Score=93.42  Aligned_cols=87  Identities=31%  Similarity=0.457  Sum_probs=75.4

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+.|+..+.||+|+||.||++.+..++..+++|.+.....   ..+.+.+|+.+++.++|+|++++++++.    ..+.
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~   89 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYL----VGDE   89 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEE----ECCE
Confidence            45678888999999999999999988889999998864322   4566889999999999999999999887    6788


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++|+||+++++|.
T Consensus        90 ~~lv~e~~~~~~L~  103 (286)
T cd06614          90 LWVVMEYMDGGSLT  103 (286)
T ss_pred             EEEEEeccCCCcHH
Confidence            99999999999885

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.29  E-value=9.6e-12  Score=94.65  Aligned_cols=85  Identities=25%  Similarity=0.353  Sum_probs=72.0

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      .++....||+|+||.||++....++..+++|.+...  .......+.+|+.+++.++|+||+++++++.    ..+..++
T Consensus        21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----~~~~~~l   94 (292)
T cd06657          21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR--KQQRRELLFNEVVIMRDYQHENVVEMYNSYL----VGDELWV   94 (292)
T ss_pred             HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc--chhHHHHHHHHHHHHHhcCCcchhheeeEEE----eCCEEEE
Confidence            344457899999999999999999999999987432  2334567899999999999999999999887    6788999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ||||+++++|.
T Consensus        95 v~e~~~~~~L~  105 (292)
T cd06657          95 VMEFLEGGALT  105 (292)
T ss_pred             EEecCCCCcHH
Confidence            99999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.29  E-value=1.3e-11  Score=92.16  Aligned_cols=80  Identities=24%  Similarity=0.372  Sum_probs=69.1

Q ss_pred             ecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEeccC
Q psy360          115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMT  193 (199)
Q Consensus       115 lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~~~  193 (199)
                      ||.|+||.||++.+..++..+++|.+...... ....+.+.+|+.+++.++|+||+++++++.    .+...++||||++
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~lv~e~~~   76 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFK----DKKYIYMLMEYCL   76 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEE----cCCccEEEEecCC
Confidence            69999999999999988999999998654332 234567999999999999999999999887    6788999999999


Q ss_pred             CCCCC
Q psy360          194 SGTLK  198 (199)
Q Consensus       194 ~G~L~  198 (199)
                      +|+|.
T Consensus        77 ~~~L~   81 (262)
T cd05572          77 GGELW   81 (262)
T ss_pred             CCcHH
Confidence            99885

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.29  E-value=1.6e-11  Score=94.98  Aligned_cols=89  Identities=27%  Similarity=0.285  Sum_probs=72.8

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..++|++.+.||+|+||.||++.+..++..+++|.+..........+.+.+|+.+++.++||||+++.++|..   ....
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~~   84 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFIS---PLED   84 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEec---CCCc
Confidence            4567899999999999999999999999999999876433333344667889999999999999999998752   3567


Q ss_pred             EEEEEeccCCCCC
Q psy360          185 IVLVTELMTSGTL  197 (199)
Q Consensus       185 ~~lv~E~~~~G~L  197 (199)
                      .+++|||+. ++|
T Consensus        85 ~~lv~e~~~-~~L   96 (328)
T cd07856          85 IYFVTELLG-TDL   96 (328)
T ss_pred             EEEEeehhc-cCH
Confidence            899999984 454

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0579|consensus

Probab=99.29  E-value=2.9e-13  Score=108.87  Aligned_cols=86  Identities=22%  Similarity=0.368  Sum_probs=74.3

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.+.++..||-|+||+||++..+.++...|.|.+..  ....+.++++-||.||..++||+||+|++.|.    ..+.+
T Consensus        31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet--kseEELEDylVEIeILa~CdHP~ivkLl~ayy----~enkL  104 (1187)
T KOG0579|consen   31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET--KSEEELEDYLVEIEILAECDHPVIVKLLSAYY----FENKL  104 (1187)
T ss_pred             HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc--cchhHHhhhhhhhhhhhcCCChHHHHHHHHHh----ccCce
Confidence            4567888999999999999999998888888888743  35667788999999999999999999999665    57889


Q ss_pred             EEEEeccCCCCC
Q psy360          186 VLVTELMTSGTL  197 (199)
Q Consensus       186 ~lv~E~~~~G~L  197 (199)
                      +|+.|||.||-.
T Consensus       105 wiliEFC~GGAV  116 (1187)
T KOG0579|consen  105 WILIEFCGGGAV  116 (1187)
T ss_pred             EEEEeecCCchH
Confidence            999999999964

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.29  E-value=1.7e-11  Score=92.00  Aligned_cols=86  Identities=23%  Similarity=0.397  Sum_probs=70.0

Q ss_pred             cccceeecCccceeEEEEEECC-CCcEEEEEEecccc--------cCHHHHHHHHHHHHHHhc-CCCCCccceeeeeeee
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQ-TGVAVAWCELQEKK--------LNKAERARFREEAEMLKG-LQHPNIVSFYGYWEVT  178 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~-~~~~~a~k~~~~~~--------~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~  178 (199)
                      |++.+.||+|+||.||++.+.. ++..+++|.+....        ........+.+|+.++.+ ++|+||+++++++.  
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~--   79 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL--   79 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc--
Confidence            6778899999999999999877 67889999875321        122344567789888875 69999999999887  


Q ss_pred             ecCCceEEEEEeccCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~  198 (199)
                        .++..+++|||+++++|.
T Consensus        80 --~~~~~~lv~e~~~~~~l~   97 (269)
T cd08528          80 --ENDRLYIVMDLIEGAPLG   97 (269)
T ss_pred             --cCCeEEEEEecCCCCcHH
Confidence              778999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.28  E-value=1.4e-11  Score=92.64  Aligned_cols=80  Identities=33%  Similarity=0.517  Sum_probs=65.3

Q ss_pred             eecCccceeEEEEEECCCCc--EEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCceEEEEEe
Q psy360          114 EIGRGSFKTVYRGLDTQTGV--AVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       114 ~lG~G~fg~v~~~~~~~~~~--~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      .||+|+||.||++.+..++.  .+++|.+.. .......+.+.+|+.++.++ +||||+++++++.    ..+..++|||
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~----~~~~~~lv~e   76 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINLLGACE----HRGYLYLAIE   76 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccc-cCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEe----cCCCceEEEE
Confidence            58999999999998877665  457777652 22344556788999999999 7999999999887    6778899999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+++|+|.
T Consensus        77 ~~~~~~L~   84 (270)
T cd05047          77 YAPHGNLL   84 (270)
T ss_pred             eCCCCcHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.28  E-value=1e-11  Score=93.82  Aligned_cols=87  Identities=33%  Similarity=0.476  Sum_probs=71.6

Q ss_pred             cccccceeecCccceeEEEEEECCC-----CcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQT-----GVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~-----~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      ..+++.+.||+|+||.||+|.+..+     +..+|+|.+.... .....+.+.+|+.++..++||||+++++++.    .
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~----~   79 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVT----K   79 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc----C
Confidence            3577889999999999999976543     5789999986432 3344567889999999999999999999887    6


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..++++||+.+++|.
T Consensus        80 ~~~~~~~~e~~~~~~l~   96 (283)
T cd05091          80 EQPLSMIFSYCSHSDLH   96 (283)
T ss_pred             CCceEEEEEcCCCCcHH
Confidence            77899999999998874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.28  E-value=1.3e-11  Score=92.17  Aligned_cols=85  Identities=31%  Similarity=0.472  Sum_probs=68.2

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+.+.+...||+|+||.||++.+..+. .+++|.+.....   ..+.+.+|+.++++++|+|++++++++.     .+.
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~   74 (260)
T cd05069           4 PRESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVS-----EEP   74 (260)
T ss_pred             ChHHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEc-----CCC
Confidence            3456888899999999999999876554 588887754322   2356889999999999999999998764     456


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++|+|.
T Consensus        75 ~~~v~e~~~~~~L~   88 (260)
T cd05069          75 IYIVTEFMGKGSLL   88 (260)
T ss_pred             cEEEEEcCCCCCHH
Confidence            79999999999874

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.28  E-value=2.6e-11  Score=92.83  Aligned_cols=87  Identities=25%  Similarity=0.345  Sum_probs=73.0

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ....|+..+.||+|+||.||++.+..++..+++|.+..... .....+.+.+|+.+++.++||||+++.++|.    ..+
T Consensus        13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~----~~~   88 (307)
T cd06607          13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL----REH   88 (307)
T ss_pred             cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE----eCC
Confidence            34568888999999999999999988899999998854322 3334567889999999999999999999987    677


Q ss_pred             eEEEEEeccCCC
Q psy360          184 YIVLVTELMTSG  195 (199)
Q Consensus       184 ~~~lv~E~~~~G  195 (199)
                      ..++||||+.|+
T Consensus        89 ~~~lv~e~~~g~  100 (307)
T cd06607          89 TAWLVMEYCLGS  100 (307)
T ss_pred             eEEEEHHhhCCC
Confidence            899999999853

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.28  E-value=6.4e-12  Score=94.94  Aligned_cols=82  Identities=27%  Similarity=0.353  Sum_probs=69.5

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLV  188 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv  188 (199)
                      |++.+.||+|+||.||++.+..++..+++|.+............+.+|+.++++++|+||+++++++.    .....++|
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~----~~~~~~lv   77 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLH----SDKKLTLV   77 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhc----cCCceEEE
Confidence            67788999999999999999999999999998644322223355778999999999999999999887    67789999


Q ss_pred             EeccCC
Q psy360          189 TELMTS  194 (199)
Q Consensus       189 ~E~~~~  194 (199)
                      +||+++
T Consensus        78 ~e~~~~   83 (284)
T cd07839          78 FEYCDQ   83 (284)
T ss_pred             EecCCC
Confidence            999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.28  E-value=8e-12  Score=94.94  Aligned_cols=88  Identities=28%  Similarity=0.309  Sum_probs=71.3

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.+.||+|+||.||+|.+..++..+++|.+............+.+|+.++++++||||+++.+++...  ..+..|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--~~~~~~   82 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS--NLDKIY   82 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec--CCCcEE
Confidence            467888999999999999999998999999999865433333334577899999999999999999987621  237899


Q ss_pred             EEEeccCCCCC
Q psy360          187 LVTELMTSGTL  197 (199)
Q Consensus       187 lv~E~~~~G~L  197 (199)
                      +||||+.+ +|
T Consensus        83 lv~e~~~~-~L   92 (293)
T cd07843          83 MVMEYVEH-DL   92 (293)
T ss_pred             EEehhcCc-CH
Confidence            99999974 54

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.28  E-value=1.4e-11  Score=92.54  Aligned_cols=91  Identities=26%  Similarity=0.456  Sum_probs=72.6

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeec--C
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLT--K  181 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~--~  181 (199)
                      +...|++.+.||+|+||.||+|.+..++..+|+|.+....   .....+.+|+.++.++ +|+||+++.+++.....  .
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM   80 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC---ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence            3456788899999999999999999999999999985432   2235678899999998 69999999998762211  1


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      ....|+||||+++|+|.
T Consensus        81 ~~~~~iv~e~~~~~~L~   97 (272)
T cd06637          81 DDQLWLVMEFCGAGSVT   97 (272)
T ss_pred             CcEEEEEEEcCCCCcHH
Confidence            35689999999999874

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.28  E-value=1.8e-11  Score=91.05  Aligned_cols=84  Identities=35%  Similarity=0.521  Sum_probs=69.7

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ..+++.+.||+|+||.||++.+. .+..+++|.+......   ...+.+|+.++++++|+|++++++++.    .....+
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~   75 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCT----ERSPIC   75 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEc----cCCceE
Confidence            45778899999999999999865 3567899987644332   245888999999999999999999887    677889


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        76 ~v~e~~~~~~L~   87 (256)
T cd05112          76 LVFEFMEHGCLS   87 (256)
T ss_pred             EEEEcCCCCcHH
Confidence            999999999874

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.28  E-value=1.4e-11  Score=91.35  Aligned_cols=80  Identities=35%  Similarity=0.550  Sum_probs=68.1

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEecc
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELM  192 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~~  192 (199)
                      +.||+|+||.||++.+.. +..+++|.+..... ......+.+|+.++++++|+||+++++++.    .....++||||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~v~e~~   74 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP-PDLKRKFLQEAEILKQYDHPNIVKLIGVCV----QKQPIYIVMELV   74 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCeEEEEEEEe----cCCCeEEEEEcC
Confidence            368999999999999877 88999998764432 245567899999999999999999999887    677899999999


Q ss_pred             CCCCCC
Q psy360          193 TSGTLK  198 (199)
Q Consensus       193 ~~G~L~  198 (199)
                      ++++|.
T Consensus        75 ~~~~l~   80 (251)
T cd05041          75 PGGSLL   80 (251)
T ss_pred             CCCcHH
Confidence            999874

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.28  E-value=1.5e-11  Score=91.49  Aligned_cols=81  Identities=35%  Similarity=0.542  Sum_probs=69.1

Q ss_pred             eeecCccceeEEEEEECCC---CcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEE
Q psy360          113 EEIGRGSFKTVYRGLDTQT---GVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVT  189 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~  189 (199)
                      +.||+|+||.||++.+...   +..+++|.+....... ..+.+.+|+..+..++|+||+++++++.    .....++||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~----~~~~~~lv~   75 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCT----EEEPLYLVL   75 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeec----CCCceEEEE
Confidence            4689999999999988765   8889999986543322 4677899999999999999999999887    678899999


Q ss_pred             eccCCCCCC
Q psy360          190 ELMTSGTLK  198 (199)
Q Consensus       190 E~~~~G~L~  198 (199)
                      ||+++|+|.
T Consensus        76 e~~~~~~L~   84 (262)
T cd00192          76 EYMEGGDLL   84 (262)
T ss_pred             EeccCCcHH
Confidence            999999885

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>KOG1151|consensus

Probab=99.28  E-value=1.5e-12  Score=100.97  Aligned_cols=97  Identities=25%  Similarity=0.342  Sum_probs=79.1

Q ss_pred             hhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHH-----HHHHHHHHHHHhcCCCCCccceee
Q psy360           99 EEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE-----RARFREEAEMLKGLQHPNIVSFYG  173 (199)
Q Consensus        99 ~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~  173 (199)
                      +...+...++|-++..||+|+|+.||++.+....+.||+|.-+..+...++     .+-..+|-+|.+.|+||.||++++
T Consensus       455 FkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYD  534 (775)
T KOG1151|consen  455 FKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYD  534 (775)
T ss_pred             hccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeee
Confidence            344455667788889999999999999999999999999986544333332     345788999999999999999999


Q ss_pred             eeeeeecCCceEEEEEeccCCCCCC
Q psy360          174 YWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       174 ~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ||.-   +.+.++-|+|||+|.+|+
T Consensus       535 yfsl---DtdsFCTVLEYceGNDLD  556 (775)
T KOG1151|consen  535 YFSL---DTDSFCTVLEYCEGNDLD  556 (775)
T ss_pred             eeee---ccccceeeeeecCCCchh
Confidence            9962   567789999999999885

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.28  E-value=2.4e-11  Score=97.57  Aligned_cols=85  Identities=25%  Similarity=0.332  Sum_probs=67.5

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec----
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT----  180 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----  180 (199)
                      ....|++.+.||+|+||.||+|.+..++..+|+|.+....      ....+|+.+++.++|+||+++++++...+.    
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~  137 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE  137 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence            4467999999999999999999999999999999875321      124479999999999999999987643221    


Q ss_pred             CCceEEEEEeccCCC
Q psy360          181 KRKYIVLVTELMTSG  195 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G  195 (199)
                      ....+++||||++++
T Consensus       138 ~~~~l~lvmE~~~~~  152 (440)
T PTZ00036        138 KNIFLNVVMEFIPQT  152 (440)
T ss_pred             CceEEEEEEecCCcc
Confidence            223578999999864

>KOG0612|consensus

Probab=99.27  E-value=4.8e-13  Score=113.01  Aligned_cols=91  Identities=26%  Similarity=0.283  Sum_probs=77.5

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      .-+++|.+++.||+|+||.|...+++.++..+|+|.+.+-... ..+..-|..|-.+|..-+.+.|++|+-.|.    +.
T Consensus        72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ----D~  147 (1317)
T KOG0612|consen   72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ----DE  147 (1317)
T ss_pred             CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc----Cc
Confidence            4457899999999999999999999999999999998653222 223445888999999999999999998887    88


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      .++|+|||||+||+|.
T Consensus       148 ~~LYlVMdY~pGGDll  163 (1317)
T KOG0612|consen  148 RYLYLVMDYMPGGDLL  163 (1317)
T ss_pred             cceEEEEecccCchHH
Confidence            9999999999999974

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.27  E-value=2.2e-11  Score=92.04  Aligned_cols=92  Identities=26%  Similarity=0.455  Sum_probs=73.9

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeee--c
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTL--T  180 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~--~  180 (199)
                      .....|++.+.||+|+||.||++.+..++..+++|.....   ......+..|+.++.++ +|+||+++++++....  .
T Consensus        13 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~---~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~   89 (282)
T cd06636          13 DPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT---EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG   89 (282)
T ss_pred             ChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC---hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC
Confidence            3456788899999999999999999999999999987532   23445688899999998 6999999999874211  1


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      .....|++|||+++|+|.
T Consensus        90 ~~~~~~iv~e~~~~~~L~  107 (282)
T cd06636          90 HDDQLWLVMEFCGAGSVT  107 (282)
T ss_pred             CCCEEEEEEEeCCCCcHH
Confidence            346789999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.27  E-value=2.1e-11  Score=92.03  Aligned_cols=90  Identities=18%  Similarity=0.265  Sum_probs=73.5

Q ss_pred             cccccccceeecCccceeEEEEEECC----CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQ----TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      ..+.|++.+.||+|+||.||+|.+..    .+..+++|.+.. .......+.+.+|+.++++++|+||+++++++..   
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~---   79 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKD-HASEIQVTLLLQESCLLYGLSHQNILPILHVCIE---   79 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccC-CCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec---
Confidence            35678889999999999999998765    357788888753 3345556778999999999999999999998752   


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      .+...++++||+++|+|.
T Consensus        80 ~~~~~~~~~~~~~~~~L~   97 (280)
T cd05043          80 DGEPPFVLYPYMNWGNLK   97 (280)
T ss_pred             CCCCCEEEEEcCCCCcHH
Confidence            357789999999999874

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.27  E-value=2.7e-11  Score=94.29  Aligned_cols=92  Identities=24%  Similarity=0.336  Sum_probs=72.4

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec--CC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT--KR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~  182 (199)
                      ..+.|++.+.||+|+||.||++.+..++..+|+|.+..........+.+.+|+.+++.++|+||+++++++.....  ..
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            4667899999999999999999999999999999886433333345668899999999999999999998752110  11


Q ss_pred             ceEEEEEeccCCCCC
Q psy360          183 KYIVLVTELMTSGTL  197 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L  197 (199)
                      ...++||||+ +++|
T Consensus        93 ~~~~lv~e~~-~~~l  106 (343)
T cd07880          93 HDFYLVMPFM-GTDL  106 (343)
T ss_pred             ceEEEEEecC-CCCH
Confidence            3568999998 5555

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.27  E-value=1.2e-11  Score=94.27  Aligned_cols=87  Identities=24%  Similarity=0.355  Sum_probs=72.8

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      +..++....||+|+||.||++.+..++..+++|.+....  ....+.+.+|+.++..++||||+++++++.    .++..
T Consensus        20 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~----~~~~~   93 (297)
T cd06659          20 RSLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHQNVVEMYKSYL----VGEEL   93 (297)
T ss_pred             hhhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc--cchHHHHHHHHHHHHhCCCCchhhhhhhee----eCCeE
Confidence            345556678999999999999998889999999985432  223456889999999999999999999887    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        94 ~iv~e~~~~~~L~  106 (297)
T cd06659          94 WVLMEFLQGGALT  106 (297)
T ss_pred             EEEEecCCCCCHH
Confidence            9999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.27  E-value=1.6e-11  Score=93.21  Aligned_cols=84  Identities=30%  Similarity=0.389  Sum_probs=70.2

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ...|++.+.||+|+||.||+|.+..++..+++|.+..... ......+.+|+.+++.++|+||+++.+++.    .++..
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~----~~~~~   78 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIH----TKETL   78 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEe----cCCeE
Confidence            3578889999999999999999999999999999854321 222335678999999999999999999887    67789


Q ss_pred             EEEEeccCC
Q psy360          186 VLVTELMTS  194 (199)
Q Consensus       186 ~lv~E~~~~  194 (199)
                      ++||||+.+
T Consensus        79 ~lv~e~~~~   87 (291)
T cd07870          79 TFVFEYMHT   87 (291)
T ss_pred             EEEEecccC
Confidence            999999964

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.27  E-value=1.2e-11  Score=96.05  Aligned_cols=92  Identities=22%  Similarity=0.283  Sum_probs=72.1

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee--cCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL--TKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~  182 (199)
                      ..+.|++.+.||+|+||.||++.+..++..+|+|.+..........+.+.+|+.++++++|+||+++++++....  ...
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            346789999999999999999999999999999998654333334456789999999999999999998775211  112


Q ss_pred             ceEEEEEeccCCCCC
Q psy360          183 KYIVLVTELMTSGTL  197 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L  197 (199)
                      ...|++||++ +++|
T Consensus        93 ~~~~~~~~~~-~~~l  106 (343)
T cd07878          93 NEVYLVTNLM-GADL  106 (343)
T ss_pred             CcEEEEeecC-CCCH
Confidence            4579999987 5555

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG0583|consensus

Probab=99.27  E-value=4.9e-12  Score=98.88  Aligned_cols=65  Identities=17%  Similarity=0.375  Sum_probs=50.9

Q ss_pred             ceeeeeccCCCcccccccccc-c-C-CCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhcccc
Q psy360            6 SYVNIRTQRTPEFMAPEMYEE-H-Y-DESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITS   71 (199)
Q Consensus         6 ~~~~~~~~gt~~y~ape~~~~-~-~-~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~~~   71 (199)
                      .....+.|||+.|+|||++.+ . | +.++|+||+||+||.|++|+.||.+ .+....+.++....+..
T Consensus       175 ~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d-~~~~~l~~ki~~~~~~~  242 (370)
T KOG0583|consen  175 DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD-SNVPNLYRKIRKGEFKI  242 (370)
T ss_pred             CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-ccHHHHHHHHhcCCccC
Confidence            445668899999999999874 3 5 4899999999999999999999988 44445555555554433

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.27  E-value=3e-12  Score=95.57  Aligned_cols=80  Identities=26%  Similarity=0.475  Sum_probs=62.8

Q ss_pred             eeecCccceeEEEEEECCCCc-------EEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          113 EEIGRGSFKTVYRGLDTQTGV-------AVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~-------~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      +.||+|+||.||+|.....+.       .+++|.+...  .....+.+.+|+.+++.++||||+++++++.    ..+..
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~----~~~~~   74 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--HRNYSESFFEAASMMSQLSHKHLVLNYGVCV----CGDES   74 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcch--hHHHHHHHHHHHHHHHhCCCCChhheeeEEE----eCCCc
Confidence            368999999999998754432       3666665322  2234567888999999999999999999887    56778


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        75 ~lv~e~~~~g~L~   87 (258)
T cd05078          75 IMVQEYVKFGSLD   87 (258)
T ss_pred             EEEEecCCCCcHH
Confidence            9999999999884

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.27  E-value=1.9e-11  Score=92.90  Aligned_cols=86  Identities=33%  Similarity=0.508  Sum_probs=70.1

Q ss_pred             cccccceeecCccceeEEEEEECC-----CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQ-----TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~-----~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      +.|.+.+.||+|+||.||++.+..     ++..+++|.+...  .....+.+.+|+.++++++|+||+++++++.    .
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~   78 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP--TLAARKDFQREAELLTNLQHEHIVKFYGVCG----D   78 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc--cHHHHHHHHHHHHHHhcCCCCCcceEEEEEc----c
Confidence            457888999999999999997543     4556888877432  2334467889999999999999999999887    6


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..++||||+++|+|.
T Consensus        79 ~~~~~lv~e~~~~~~L~   95 (291)
T cd05094          79 GDPLIMVFEYMKHGDLN   95 (291)
T ss_pred             CCceEEEEecCCCCcHH
Confidence            77899999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG0594|consensus

Probab=99.27  E-value=7.3e-12  Score=94.07  Aligned_cols=88  Identities=23%  Similarity=0.254  Sum_probs=69.3

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCC-ccceeeeeeeee--cCC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN-IVSFYGYWEVTL--TKR  182 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~--~~~  182 (199)
                      ...|...++||+|.||.||+|+...+|..||+|++..............+|+.++++|+|+| ||+|++++.+..  ...
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence            34567778899999999999999999999999998754322123355789999999999999 999999887311  011


Q ss_pred             ceEEEEEeccC
Q psy360          183 KYIVLVTELMT  193 (199)
Q Consensus       183 ~~~~lv~E~~~  193 (199)
                      ..++||+||++
T Consensus        90 ~~l~lvfe~~d  100 (323)
T KOG0594|consen   90 GKLYLVFEFLD  100 (323)
T ss_pred             ceEEEEEEeec
Confidence            38899999986

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.27  E-value=1.9e-11  Score=93.23  Aligned_cols=91  Identities=23%  Similarity=0.284  Sum_probs=71.7

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee-----
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL-----  179 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----  179 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+++|.+............+.+|+.++++++||||+++++++.+..     
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            346788899999999999999999989999999998644322333456778999999999999999999876211     


Q ss_pred             -cCCceEEEEEeccCCC
Q psy360          180 -TKRKYIVLVTELMTSG  195 (199)
Q Consensus       180 -~~~~~~~lv~E~~~~G  195 (199)
                       ......++|+||++++
T Consensus        85 ~~~~~~~~lv~e~~~~~  101 (302)
T cd07864          85 KKDKGAFYLVFEYMDHD  101 (302)
T ss_pred             cccCCcEEEEEcccCcc
Confidence             0123789999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.27  E-value=2.1e-11  Score=92.10  Aligned_cols=86  Identities=26%  Similarity=0.330  Sum_probs=67.3

Q ss_pred             cccccceeecCccceeEEEEEECCCCc----EEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGV----AVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~----~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      +.|++.+.||+|+||.||+|.+..++.    .+++|.+... ........+..|+.++.++.||||+++++++.     .
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-----~   80 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-----G   80 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-----C
Confidence            467888999999999999998876665    3666666422 22334456788888999999999999999874     4


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ...++++||+++|+|.
T Consensus        81 ~~~~~i~e~~~~gsL~   96 (279)
T cd05111          81 ASLQLVTQLSPLGSLL   96 (279)
T ss_pred             CccEEEEEeCCCCcHH
Confidence            5578999999999985

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.27  E-value=1.8e-11  Score=93.06  Aligned_cols=89  Identities=25%  Similarity=0.256  Sum_probs=68.5

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeeeeeeeec-CCceE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLT-KRKYI  185 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~-~~~~~  185 (199)
                      +|+..+.||+|+||.||++.+..++..+++|.+............+.+|+.+++.+. |+||+++++++..... .....
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~   81 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL   81 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence            578889999999999999999999999999987543222223356788999999995 6999999998762111 12238


Q ss_pred             EEEEeccCCCCC
Q psy360          186 VLVTELMTSGTL  197 (199)
Q Consensus       186 ~lv~E~~~~G~L  197 (199)
                      |+||||+++ +|
T Consensus        82 ~lv~e~~~~-~l   92 (295)
T cd07837          82 YLVFEYLDS-DL   92 (295)
T ss_pred             EEEeeccCc-CH
Confidence            999999986 44

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.26  E-value=2.7e-11  Score=93.69  Aligned_cols=80  Identities=30%  Similarity=0.359  Sum_probs=64.2

Q ss_pred             ecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcC---CCCCccceeeeeeeeecCCceEEEEEe
Q psy360          115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGL---QHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       115 lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      ||+|+||.||++.+..++..+|+|.+...... ......+..|..++..+   .||||+++++++.    ..+..|+|||
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~----~~~~~~lv~e   76 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQ----TDSDLYLVTD   76 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEe----cCCeEEEEEc
Confidence            69999999999999999999999998644322 22334455677776655   6999999999887    7788999999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+++|+|.
T Consensus        77 ~~~~g~L~   84 (330)
T cd05586          77 YMSGGELF   84 (330)
T ss_pred             CCCCChHH
Confidence            99999874

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.26  E-value=2.5e-11  Score=91.62  Aligned_cols=87  Identities=30%  Similarity=0.417  Sum_probs=70.6

Q ss_pred             ccccccceeecCccceeEEEEEECCCCc----EEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGV----AVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~----~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      .+.+++.+.||+|+||.||+|.+..++.    .||+|.+... ........+.+|+.++..++|+||+++++++.     
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----   79 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN-TSPKANKEILDEAYVMAGVGSPYVCRLLGICL-----   79 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCC-CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEc-----
Confidence            3568889999999999999998766655    4788887543 23444567889999999999999999999885     


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      ....+++|||+++|+|.
T Consensus        80 ~~~~~l~~~~~~~g~l~   96 (279)
T cd05109          80 TSTVQLVTQLMPYGCLL   96 (279)
T ss_pred             CCCcEEEEEcCCCCCHH
Confidence            34578999999999874

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.26  E-value=3.5e-11  Score=92.59  Aligned_cols=87  Identities=24%  Similarity=0.339  Sum_probs=72.8

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      .....|+..+.||+|+||.||++.+..++..+++|.+..... .......+.+|+.+++.++|+|++++++++.    ..
T Consensus        22 ~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----~~   97 (317)
T cd06635          22 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYL----RE   97 (317)
T ss_pred             CchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEe----eC
Confidence            344567888999999999999999988999999998864322 2334567889999999999999999999887    67


Q ss_pred             ceEEEEEeccCC
Q psy360          183 KYIVLVTELMTS  194 (199)
Q Consensus       183 ~~~~lv~E~~~~  194 (199)
                      +..++||||+.|
T Consensus        98 ~~~~lv~e~~~g  109 (317)
T cd06635          98 HTAWLVMEYCLG  109 (317)
T ss_pred             CeEEEEEeCCCC
Confidence            788999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0033|consensus

Probab=99.26  E-value=6.5e-12  Score=90.47  Aligned_cols=67  Identities=16%  Similarity=0.373  Sum_probs=54.9

Q ss_pred             ceeeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhccccCC
Q psy360            6 SYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAG   73 (199)
Q Consensus         6 ~~~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~~~~~   73 (199)
                      +..--..+|||.|||||+++ ..|+-.+|+|+-|||||.|+.|..||.+ .+...+++.|....+..+.
T Consensus       166 g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~-~~~~rlye~I~~g~yd~~~  233 (355)
T KOG0033|consen  166 GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD-EDQHRLYEQIKAGAYDYPS  233 (355)
T ss_pred             ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCC-ccHHHHHHHHhccccCCCC
Confidence            33444678999999999887 6799999999999999999999999976 3556777888877665544

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.26  E-value=1.7e-11  Score=91.30  Aligned_cols=80  Identities=33%  Similarity=0.466  Sum_probs=66.3

Q ss_pred             eeecCccceeEEEEEECC-C--CcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEE
Q psy360          113 EEIGRGSFKTVYRGLDTQ-T--GVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVT  189 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~-~--~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~  189 (199)
                      +.||+|+||.||++.+.. .  ...+++|.+...... ...+.+.+|+.++++++|+||+++++++.    . ...++||
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----~-~~~~~v~   74 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVL----T-HPLMMVT   74 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEc----C-CeEEEEE
Confidence            368999999999998754 2  336899988654433 55678999999999999999999999886    4 7889999


Q ss_pred             eccCCCCCC
Q psy360          190 ELMTSGTLK  198 (199)
Q Consensus       190 E~~~~G~L~  198 (199)
                      ||+++|+|.
T Consensus        75 e~~~~~~L~   83 (257)
T cd05040          75 ELAPLGSLL   83 (257)
T ss_pred             EecCCCcHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.26  E-value=1.2e-11  Score=92.17  Aligned_cols=78  Identities=27%  Similarity=0.509  Sum_probs=62.7

Q ss_pred             eeecCccceeEEEEEECCCC----------cEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          113 EEIGRGSFKTVYRGLDTQTG----------VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~----------~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      +.||+|+||.||++.+..++          ..+++|.+....   .....+.+|+.++++++|+||+++++++.    . 
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~-   72 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH---RDSLAFFETASLMSQLSHKHLVKLYGVCV----R-   72 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch---hhHHHHHHHHHHHHcCCCcchhheeeEEe----c-
Confidence            36899999999999887665          346666654322   11567889999999999999999999886    4 


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..++||||+++|+|.
T Consensus        73 ~~~~lv~e~~~~~~L~   88 (259)
T cd05037          73 DENIMVEEYVKFGPLD   88 (259)
T ss_pred             CCcEEEEEcCCCCcHH
Confidence            6679999999999885

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0581|consensus

Probab=99.26  E-value=4.9e-12  Score=95.50  Aligned_cols=59  Identities=22%  Similarity=0.488  Sum_probs=47.5

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC----CChhHHHHHHHh
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC----IGPAQIYKKVVS   66 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~----~~~~~~~~~i~~   66 (199)
                      ...+.+||..|||||-++ ..|+.++||||||+.++|+.+|+.|+...    .+..+.+..|+.
T Consensus       233 ~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~  296 (364)
T KOG0581|consen  233 IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD  296 (364)
T ss_pred             hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc
Confidence            345789999999999887 57999999999999999999999999874    233444444443

>KOG0576|consensus

Probab=99.25  E-value=6.1e-13  Score=107.09  Aligned_cols=90  Identities=22%  Similarity=0.455  Sum_probs=77.5

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..+++|.++.++|+|.||.||++++..++...|+|.++...  .........|+-+++.++|+|||.+++-+-    .++
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep--~dd~~~iqqei~~~~dc~h~nivay~gsyl----r~d   85 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP--GDDFSGIQQEIGMLRDCRHPNIVAYFGSYL----RRD   85 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccC--CccccccccceeeeecCCCcChHHHHhhhh----hhc
Confidence            45678899999999999999999999999999999986432  223345678999999999999999999776    788


Q ss_pred             eEEEEEeccCCCCCCC
Q psy360          184 YIVLVTELMTSGTLKT  199 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~~  199 (199)
                      ..+++||||.||+|+|
T Consensus        86 klwicMEycgggslQd  101 (829)
T KOG0576|consen   86 KLWICMEYCGGGSLQD  101 (829)
T ss_pred             CcEEEEEecCCCcccc
Confidence            9999999999999986

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.25  E-value=7.7e-12  Score=93.76  Aligned_cols=81  Identities=31%  Similarity=0.487  Sum_probs=65.4

Q ss_pred             eeecCccceeEEEEEECCCC------cEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          113 EEIGRGSFKTVYRGLDTQTG------VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~------~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.||+|+||.||+|......      ..+++|.+... ........+.+|+.+++.++||||+++++++.    ..+..+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~   75 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG-ATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL----LNEPQY   75 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcc-cchhhHHHHHHHHHHHHhcCCCCeeeEeeeec----CCCCeE
Confidence            36899999999999865433      67888877532 22234567889999999999999999999887    677899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        76 ~v~e~~~~~~L~   87 (269)
T cd05044          76 IIMELMEGGDLL   87 (269)
T ss_pred             EEEeccCCCcHH
Confidence            999999999874

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.25  E-value=3.5e-11  Score=91.32  Aligned_cols=91  Identities=26%  Similarity=0.406  Sum_probs=73.2

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeee-cCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTL-TKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~-~~~  182 (199)
                      ..++|++.+.||+|+||.||++....++..+++|.+....   .....+.+|+.++.++ +|+|++++++++.... ...
T Consensus        20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~   96 (291)
T cd06639          20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG   96 (291)
T ss_pred             CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence            4577899999999999999999999999999999885421   2235577899999999 7999999999886321 123


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ...++||||+++|+|.
T Consensus        97 ~~~~lv~ey~~~~sL~  112 (291)
T cd06639          97 GQLWLVLELCNGGSVT  112 (291)
T ss_pred             CeeEEEEEECCCCcHH
Confidence            4689999999999874

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.25  E-value=2.7e-11  Score=91.52  Aligned_cols=84  Identities=29%  Similarity=0.404  Sum_probs=70.1

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLV  188 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv  188 (199)
                      |++.+.||.|++|.||++.+..++..+++|.+............+.+|+.+++.++|+|++++++++.    ..+..|++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~----~~~~~~iv   76 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH----SENKLYLV   76 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec----cCCeEEEE
Confidence            46678999999999999999889999999988644322333456788999999999999999999887    67899999


Q ss_pred             EeccCCCCC
Q psy360          189 TELMTSGTL  197 (199)
Q Consensus       189 ~E~~~~G~L  197 (199)
                      |||++ ++|
T Consensus        77 ~e~~~-~~l   84 (283)
T cd07835          77 FEFLD-LDL   84 (283)
T ss_pred             EeccC-cCH
Confidence            99995 455

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.24  E-value=5e-11  Score=90.34  Aligned_cols=85  Identities=29%  Similarity=0.427  Sum_probs=72.0

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      .++..+.||+|++|.||++.+..++..+++|.+...  .....+.+.+|+.+++.++|+||+++++++.    ..+..++
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~----~~~~~~~   93 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR--KQQRRELLFNEVVIMRDYQHPNIVEMYSSYL----VGDELWV   93 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc--chhHHHHHHHHHHHHHHcCCCChheEEEEEE----cCCeEEE
Confidence            455568999999999999998888999999987532  2334456889999999999999999999887    6788999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ++||+++++|.
T Consensus        94 v~e~~~~~~L~  104 (285)
T cd06648          94 VMEFLEGGALT  104 (285)
T ss_pred             EEeccCCCCHH
Confidence            99999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.24  E-value=1.6e-11  Score=95.21  Aligned_cols=90  Identities=24%  Similarity=0.296  Sum_probs=72.7

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ++|++.+.||+|+||.||++.+..++..+++|.+..........+.+.+|+.++++++|+||+++++++..........+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            67888899999999999999999999999999986543333345667889999999999999999987753222446789


Q ss_pred             EEEeccCCCCC
Q psy360          187 LVTELMTSGTL  197 (199)
Q Consensus       187 lv~E~~~~G~L  197 (199)
                      +||||+. |+|
T Consensus        85 lv~e~~~-~~l   94 (334)
T cd07855          85 VVMDLME-SDL   94 (334)
T ss_pred             EEEehhh-hhH
Confidence            9999996 454

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.24  E-value=2.3e-11  Score=94.23  Aligned_cols=86  Identities=23%  Similarity=0.407  Sum_probs=68.9

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH------------HHHHHHHHHHHHhcCCCCCccceeee
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA------------ERARFREEAEMLKGLQHPNIVSFYGY  174 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~------------~~~~~~~E~~~l~~l~h~niv~l~~~  174 (199)
                      ++..+.+.||+|+||.||++.+..++..+|+|.+........            ....+.+|+.+++.++|+||++++++
T Consensus         9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   88 (335)
T PTZ00024          9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV   88 (335)
T ss_pred             chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence            344566889999999999999999999999998854322110            01247789999999999999999998


Q ss_pred             eeeeecCCceEEEEEeccCCCCC
Q psy360          175 WEVTLTKRKYIVLVTELMTSGTL  197 (199)
Q Consensus       175 ~~~~~~~~~~~~lv~E~~~~G~L  197 (199)
                      +.    ..+..++||||+.+ +|
T Consensus        89 ~~----~~~~~~lv~e~~~~-~l  106 (335)
T PTZ00024         89 YV----EGDFINLVMDIMAS-DL  106 (335)
T ss_pred             Ee----cCCcEEEEEecccc-CH
Confidence            87    67899999999974 55

>KOG4717|consensus

Probab=99.24  E-value=6.3e-12  Score=99.11  Aligned_cols=90  Identities=30%  Similarity=0.435  Sum_probs=79.8

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ..-|.+.+.||+|.|+.|.++++-=+|..||||.+.+.++..-....+.+|++.|+.++|||||+||....    .+..+
T Consensus        17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViD----TQTKl   92 (864)
T KOG4717|consen   17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVID----TQTKL   92 (864)
T ss_pred             eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhc----ccceE
Confidence            34578889999999999999999889999999999887776666677889999999999999999999765    77889


Q ss_pred             EEEEeccCCCCCCC
Q psy360          186 VLVTELMTSGTLKT  199 (199)
Q Consensus       186 ~lv~E~~~~G~L~~  199 (199)
                      |||+|+=++|+|+|
T Consensus        93 yLiLELGD~GDl~D  106 (864)
T KOG4717|consen   93 YLILELGDGGDLFD  106 (864)
T ss_pred             EEEEEecCCchHHH
Confidence            99999999999864

>KOG0607|consensus

Probab=99.23  E-value=3.4e-12  Score=95.07  Aligned_cols=86  Identities=28%  Similarity=0.383  Sum_probs=74.0

Q ss_pred             cccccc-eeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeeeeeeeecCCce
Q psy360          107 GYLKFE-EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       107 ~~~~~~-~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~  184 (199)
                      +.|++. +.||+|+|+.|--|....++.++|||.+.+.  ....+.+..+|++++.+++ |+||++|+.+|+    ++..
T Consensus        77 d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq--~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE----dd~~  150 (463)
T KOG0607|consen   77 DMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ--PGHSRSRVFREVETFYQCQGHKNILQLIEFFE----DDTR  150 (463)
T ss_pred             HHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC--CchHHHHHHHHHHHHHHhcCCccHHHHHHHhc----ccce
Confidence            345553 6799999999999999999999999999654  3335677899999999995 999999999998    7889


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .|||||-|.||.|.
T Consensus       151 FYLVfEKm~GGplL  164 (463)
T KOG0607|consen  151 FYLVFEKMRGGPLL  164 (463)
T ss_pred             EEEEEecccCchHH
Confidence            99999999999874

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.23  E-value=4.3e-11  Score=91.66  Aligned_cols=87  Identities=26%  Similarity=0.295  Sum_probs=69.5

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.|++.+.||+|+||.||+|.+..++..+|+|.+............+.+|+.++++++|+||+++++++..  ...+..
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~~   83 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVG--KHLDSI   83 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEec--CCCCeE
Confidence            356889999999999999999999999999999886433222223346689999999999999999998752  123578


Q ss_pred             EEEEeccCC
Q psy360          186 VLVTELMTS  194 (199)
Q Consensus       186 ~lv~E~~~~  194 (199)
                      ++||||+.+
T Consensus        84 ~lv~e~~~~   92 (309)
T cd07845          84 FLVMEYCEQ   92 (309)
T ss_pred             EEEEecCCC
Confidence            999999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0588|consensus

Probab=99.23  E-value=1.2e-11  Score=99.68  Aligned_cols=63  Identities=17%  Similarity=0.285  Sum_probs=52.5

Q ss_pred             eeeeeccCCCccccccccccc--CCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhccc
Q psy360            7 YVNIRTQRTPEFMAPEMYEEH--YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT   70 (199)
Q Consensus         7 ~~~~~~~gt~~y~ape~~~~~--~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~~   70 (199)
                      ....+.||+|.|.|||+++|.  .+-++||||.|||||.|++|+.||++ ++...++.++..+.+.
T Consensus       166 klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-dNir~LLlKV~~G~f~  230 (786)
T KOG0588|consen  166 KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-DNIRVLLLKVQRGVFE  230 (786)
T ss_pred             ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-ccHHHHHHHHHcCccc
Confidence            445678999999999999854  56899999999999999999999986 6777777777666554

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.23  E-value=4.1e-11  Score=90.93  Aligned_cols=87  Identities=17%  Similarity=0.298  Sum_probs=70.2

Q ss_pred             ccccceeecCccceeEEEEEEC---CCCcEEEEEEecccccC--HHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecC
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDT---QTGVAVAWCELQEKKLN--KAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~---~~~~~~a~k~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  181 (199)
                      +|++.+.||+|+||.||.+.+.   .++..+|+|.+......  ....+.+.+|+.+++++ +|+||+++++++.    .
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----~   76 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ----T   76 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEee----c
Confidence            3677899999999999999764   47889999988643221  12345678899999999 5999999998887    6


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      +...|+||||+++|+|.
T Consensus        77 ~~~~~lv~e~~~~~~L~   93 (290)
T cd05613          77 DTKLHLILDYINGGELF   93 (290)
T ss_pred             CCeEEEEEecCCCCcHH
Confidence            77899999999999874

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.23  E-value=3.2e-11  Score=93.57  Aligned_cols=90  Identities=27%  Similarity=0.400  Sum_probs=72.5

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..++|++.+.||+|+||.||+|.+..++..+++|.+............+.+|+.+++++ +|+||+++++++..  ....
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~--~~~~   82 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA--ENDK   82 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc--CCCc
Confidence            45678899999999999999999988899999998854333333445677899999999 99999999998752  1345


Q ss_pred             eEEEEEeccCCCCC
Q psy360          184 YIVLVTELMTSGTL  197 (199)
Q Consensus       184 ~~~lv~E~~~~G~L  197 (199)
                      ..++||||+++ +|
T Consensus        83 ~~~lv~e~~~~-~L   95 (337)
T cd07852          83 DIYLVFEYMET-DL   95 (337)
T ss_pred             eEEEEeccccc-CH
Confidence            68999999974 55

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.23  E-value=4e-11  Score=91.92  Aligned_cols=85  Identities=22%  Similarity=0.318  Sum_probs=68.1

Q ss_pred             cccceeecCccceeEEEEEECC--CCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQ--TGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~--~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      |++.+.||+|+||.||+|.+..  ++..+|+|.+..... .....+.+.+|+.++..++||||+++++++.+.  .....
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~   79 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH--ADKSV   79 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC--CCceE
Confidence            6778899999999999999887  889999999865321 112235578899999999999999999988721  23789


Q ss_pred             EEEEeccCCC
Q psy360          186 VLVTELMTSG  195 (199)
Q Consensus       186 ~lv~E~~~~G  195 (199)
                      ++||||++++
T Consensus        80 ~lv~e~~~~~   89 (316)
T cd07842          80 YLLFDYAEHD   89 (316)
T ss_pred             EEEEeCCCcC
Confidence            9999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG1025|consensus

Probab=99.23  E-value=2.4e-12  Score=106.05  Aligned_cols=85  Identities=33%  Similarity=0.469  Sum_probs=69.1

Q ss_pred             cccceeecCccceeEEEEEECCCC----cEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~----~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ++..++||+|+||+||+|.+...+    .+||+|.+... ...+..+.+..|+-+|.++.|||+++|+++|.     ...
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~-t~~~~s~e~LdeAl~masldHpnl~RLLgvc~-----~s~  771 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF-TSPKASIELLDEALRMASLDHPNLLRLLGVCM-----LST  771 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeecc-CCchhhHHHHHHHHHHhcCCCchHHHHhhhcc-----cch
Confidence            455789999999999999886554    46788877643 34445677999999999999999999999985     333


Q ss_pred             EEEEEeccCCCCCCC
Q psy360          185 IVLVTELMTSGTLKT  199 (199)
Q Consensus       185 ~~lv~E~~~~G~L~~  199 (199)
                      ..||++||++|.|.|
T Consensus       772 ~qlvtq~mP~G~LlD  786 (1177)
T KOG1025|consen  772 LQLVTQLMPLGCLLD  786 (1177)
T ss_pred             HHHHHHhcccchHHH
Confidence            789999999999854

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.23  E-value=8.8e-11  Score=91.71  Aligned_cols=90  Identities=26%  Similarity=0.262  Sum_probs=72.1

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee--cCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL--TKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~  182 (199)
                      ..+.|+..+.||+|+||.||++.+..++..+|+|.+..........+.+.+|+.++++++|+||+++++++....  ...
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            346788999999999999999999999999999998644334444566788999999999999999999875211  122


Q ss_pred             ceEEEEEeccCC
Q psy360          183 KYIVLVTELMTS  194 (199)
Q Consensus       183 ~~~~lv~E~~~~  194 (199)
                      ...|+||||+.+
T Consensus        94 ~~~~lv~e~~~~  105 (353)
T cd07850          94 QDVYLVMELMDA  105 (353)
T ss_pred             CcEEEEEeccCC
Confidence            457999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.23  E-value=3.4e-11  Score=91.28  Aligned_cols=89  Identities=24%  Similarity=0.370  Sum_probs=64.7

Q ss_pred             ccccceeecCccceeEEEEEECC-CCcEEEEEEecccccCHHHHHHHHHHHHHHhcC---CCCCccceeeeeeeee-cCC
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQ-TGVAVAWCELQEKKLNKAERARFREEAEMLKGL---QHPNIVSFYGYWEVTL-TKR  182 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~-~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~-~~~  182 (199)
                      .|++.+.||+|+||.||++.+.. .+..+|+|.+............+.+|+.+++.+   +||||++++++|.... ...
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            57888999999999999998854 467899998864433222334466677776665   6999999999875211 134


Q ss_pred             ceEEEEEeccCCCCC
Q psy360          183 KYIVLVTELMTSGTL  197 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L  197 (199)
                      ...++||||+.+ +|
T Consensus        82 ~~~~lv~e~~~~-~l   95 (290)
T cd07862          82 TKLTLVFEHVDQ-DL   95 (290)
T ss_pred             CcEEEEEccCCC-CH
Confidence            568999999974 44

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.23  E-value=5.2e-11  Score=89.93  Aligned_cols=84  Identities=26%  Similarity=0.377  Sum_probs=70.0

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC--ceEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR--KYIV  186 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~--~~~~  186 (199)
                      |++.+.||+|+||.||++.+..++..+++|.+............+.+|+.++++++|+|++++++++.    ..  +..+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~~   76 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVT----SKGKGSIY   76 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEe----cCCCCcEE
Confidence            45678999999999999999999999999998754323334456889999999999999999999886    44  7899


Q ss_pred             EEEeccCCCCC
Q psy360          187 LVTELMTSGTL  197 (199)
Q Consensus       187 lv~E~~~~G~L  197 (199)
                      +||||+++ +|
T Consensus        77 lv~e~~~~-~l   86 (287)
T cd07840          77 MVFEYMDH-DL   86 (287)
T ss_pred             EEeccccc-cH
Confidence            99999975 44

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.22  E-value=2.8e-11  Score=90.19  Aligned_cols=80  Identities=24%  Similarity=0.397  Sum_probs=68.2

Q ss_pred             ecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEeccC
Q psy360          115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMT  193 (199)
Q Consensus       115 lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~~~  193 (199)
                      ||+|+||.||++.+..++..+++|.+...... ....+.+.+|+.++.+++|+||+++++.+.    ..+..|++|||++
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----~~~~~~lv~e~~~   76 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQ----GKKNLYLVMEYLP   76 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhee----cCcEEEEEEecCC
Confidence            68999999999999988999999988644322 234567889999999999999999998876    7788999999999


Q ss_pred             CCCCC
Q psy360          194 SGTLK  198 (199)
Q Consensus       194 ~G~L~  198 (199)
                      +|+|.
T Consensus        77 ~~~L~   81 (265)
T cd05579          77 GGDLA   81 (265)
T ss_pred             CCcHH
Confidence            99874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.22  E-value=3.9e-11  Score=91.71  Aligned_cols=86  Identities=34%  Similarity=0.482  Sum_probs=68.1

Q ss_pred             cccccceeecCccceeEEEEEECCCCc----EEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGV----AVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~----~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ..|+..+.||+|+||.||++.+..++.    .+++|.+... ........+.+|+.+++.++|+||++++++|.    . 
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~----~-   80 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET-TGPKANVEFMDEALIMASMDHPHLVRLLGVCL----S-   80 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCcccEEEEEc----C-
Confidence            457788899999999999998876665    4677776533 23334456889999999999999999999885    2 


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ...++++||+++|+|.
T Consensus        81 ~~~~~v~e~~~~g~l~   96 (303)
T cd05110          81 PTIQLVTQLMPHGCLL   96 (303)
T ss_pred             CCceeeehhcCCCCHH
Confidence            3467999999999874

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.22  E-value=8.9e-11  Score=86.72  Aligned_cols=84  Identities=32%  Similarity=0.589  Sum_probs=72.7

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLV  188 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv  188 (199)
                      |...+.||+|++|.||++.+..++..+++|.+.....  ...+.+.+|+.++++++|+|++++++++.    .....+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~l~   75 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYL----KKDELWIV   75 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEe----cCCeEEEE
Confidence            5677899999999999999988899999999864332  34567899999999999999999999887    66889999


Q ss_pred             EeccCCCCCC
Q psy360          189 TELMTSGTLK  198 (199)
Q Consensus       189 ~E~~~~G~L~  198 (199)
                      +||+++++|.
T Consensus        76 ~e~~~~~~L~   85 (253)
T cd05122          76 MEFCSGGSLK   85 (253)
T ss_pred             EecCCCCcHH
Confidence            9999998874

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.22  E-value=5.8e-11  Score=90.75  Aligned_cols=88  Identities=19%  Similarity=0.227  Sum_probs=68.8

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee----cCC
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL----TKR  182 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~  182 (199)
                      +.|++.+.||+|+||.||++.+..++..+|+|.+............+.+|+.++++++||||+++++++....    ...
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            4688899999999999999999999999999988643322222345678999999999999999999876211    112


Q ss_pred             ceEEEEEeccCC
Q psy360          183 KYIVLVTELMTS  194 (199)
Q Consensus       183 ~~~~lv~E~~~~  194 (199)
                      ...++||||+.+
T Consensus        92 ~~~~lv~e~~~~  103 (310)
T cd07865          92 GSFYLVFEFCEH  103 (310)
T ss_pred             ceEEEEEcCCCc
Confidence            456999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.22  E-value=1.3e-11  Score=96.71  Aligned_cols=56  Identities=32%  Similarity=0.622  Sum_probs=45.5

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++|+|++|+.||.. .+....+..+..
T Consensus       194 ~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~-~~~~~~~~~i~~  250 (363)
T cd05628         194 FSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS-ETPQETYKKVMN  250 (363)
T ss_pred             ccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC-CCHHHHHHHHHc
Confidence            3568999999999876 5699999999999999999999999976 344455555543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0695|consensus

Probab=99.22  E-value=6.6e-12  Score=94.30  Aligned_cols=47  Identities=32%  Similarity=0.526  Sum_probs=43.2

Q ss_pred             ceeeeeccCCCcccccccccc-cCCCcCcchhHHHHHHHHHhCCCCCC
Q psy360            6 SYVNIRTQRTPEFMAPEMYEE-HYDESVDVYAFGMCMLEMSTSEYPYM   52 (199)
Q Consensus         6 ~~~~~~~~gt~~y~ape~~~~-~~~~~~d~ws~gv~l~~l~~g~~p~~   52 (199)
                      +..+++.||||.|+|||+++| .|+.++|+|++||+++||+.|+.||+
T Consensus       405 gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd  452 (593)
T KOG0695|consen  405 GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD  452 (593)
T ss_pred             CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence            445678999999999999995 59999999999999999999999997

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.21  E-value=5.7e-11  Score=88.68  Aligned_cols=82  Identities=27%  Similarity=0.419  Sum_probs=64.3

Q ss_pred             eeecCccceeEEEEEECC---CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEE
Q psy360          113 EEIGRGSFKTVYRGLDTQ---TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVT  189 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~  189 (199)
                      +.||+|+||.||+|.+..   ....+|+|.+... ......+.+.+|+.+++.++||||+++++++..   .+...++||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~~lv~   76 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLP---SEGSPLVVL   76 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCcc-CCHHHHHHHHHHHHHHccCCCCCcceEEEEeec---CCCCcEEEE
Confidence            368999999999997643   3457899887532 233455678899999999999999999997642   355678999


Q ss_pred             eccCCCCCC
Q psy360          190 ELMTSGTLK  198 (199)
Q Consensus       190 E~~~~G~L~  198 (199)
                      ||+.+|+|.
T Consensus        77 e~~~~~~L~   85 (262)
T cd05058          77 PYMKHGDLR   85 (262)
T ss_pred             ecCCCCCHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.21  E-value=8.2e-11  Score=88.35  Aligned_cols=90  Identities=21%  Similarity=0.318  Sum_probs=69.8

Q ss_pred             cccceeecCccceeEEEEEEC---CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC--Cc
Q psy360          109 LKFEEEIGRGSFKTVYRGLDT---QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK--RK  183 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~---~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--~~  183 (199)
                      |++.+.||+|+||.||++.+.   .++..+|+|.+..........+.+.+|+.+++.++||||+++++++......  ..
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            456788999999999999754   4578899999876554555667789999999999999999999977521111  12


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++++||+++|+|.
T Consensus        81 ~~~~~~~~~~~~~l~   95 (273)
T cd05074          81 IPMVILPFMKHGDLH   95 (273)
T ss_pred             ceEEEEecCCCCcHH
Confidence            357899999999873

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.21  E-value=8.8e-11  Score=91.90  Aligned_cols=79  Identities=16%  Similarity=0.095  Sum_probs=67.0

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ...|++.+.||+|+||.||+|.+..++..+|+|.....        ....|+.++++++|+||+++++++.    ..+..
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~  132 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLV----SGAIT  132 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEE----eCCee
Confidence            34689999999999999999999999999999875422        1346899999999999999999887    67788


Q ss_pred             EEEEeccCCCCC
Q psy360          186 VLVTELMTSGTL  197 (199)
Q Consensus       186 ~lv~E~~~~G~L  197 (199)
                      ++||||+.+ +|
T Consensus       133 ~lv~e~~~~-~l  143 (357)
T PHA03209        133 CMVLPHYSS-DL  143 (357)
T ss_pred             EEEEEccCC-cH
Confidence            999999964 44

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.21  E-value=5.1e-11  Score=89.20  Aligned_cols=80  Identities=26%  Similarity=0.439  Sum_probs=62.4

Q ss_pred             eeecCccceeEEEEEECC------------CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          113 EEIGRGSFKTVYRGLDTQ------------TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~------------~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      +.||+|+||.||+|....            ....+++|.+...  .......+.+|+.++..++||||+++++++.    
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~----   74 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS--HRDISLAFFETASMMRQVSHKHIVLLYGVCV----   74 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh--hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEe----
Confidence            368999999999997432            2235777776432  2334457888999999999999999999987    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      .....++||||+++|+|.
T Consensus        75 ~~~~~~lv~e~~~~~~l~   92 (262)
T cd05077          75 RDVENIMVEEFVEFGPLD   92 (262)
T ss_pred             cCCCCEEEEecccCCCHH
Confidence            667789999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG4279|consensus

Probab=99.20  E-value=1.2e-11  Score=100.72  Aligned_cols=79  Identities=30%  Similarity=0.510  Sum_probs=70.9

Q ss_pred             eecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEeccC
Q psy360          114 EIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMT  193 (199)
Q Consensus       114 ~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~~~  193 (199)
                      +||+|.||.||-|++..+...+|+|.+..+  .....+.+..|+.+.++|+|.|||+++|.+.    +++++-|.||-++
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek--dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~s----enGf~kIFMEqVP  655 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK--DSREVQPLHEEIALHSTLRHKNIVRYLGSVS----ENGFFKIFMEQVP  655 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccc--cchhhccHHHHHHHHHHHhhHhHHHHhhccC----CCCeEEEEeecCC
Confidence            699999999999999999999999999654  3445677889999999999999999999876    8889999999999


Q ss_pred             CCCCC
Q psy360          194 SGTLK  198 (199)
Q Consensus       194 ~G~L~  198 (199)
                      ||+|-
T Consensus       656 GGSLS  660 (1226)
T KOG4279|consen  656 GGSLS  660 (1226)
T ss_pred             CCcHH
Confidence            99984

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.20  E-value=2e-11  Score=91.10  Aligned_cols=86  Identities=30%  Similarity=0.449  Sum_probs=67.7

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEeccc---ccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEK---KLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~---~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      |.+.+.||+|+||.||++.+...+...++|.+...   .........+..|+.++++++||||+++++++.    .....
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~   77 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFL----ERDAF   77 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHh----cCCce
Confidence            67788999999999999988777666666555432   222233445778999999999999999999886    66778


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++++|.
T Consensus        78 ~lv~e~~~~~~l~   90 (260)
T cd08222          78 CIITEYCEGRDLD   90 (260)
T ss_pred             EEEEEeCCCCCHH
Confidence            9999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0587|consensus

Probab=99.20  E-value=7.8e-11  Score=97.65  Aligned_cols=97  Identities=26%  Similarity=0.402  Sum_probs=76.6

Q ss_pred             hhhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeee
Q psy360           98 KEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWE  176 (199)
Q Consensus        98 ~~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~  176 (199)
                      ..+..+...+-+.+...||.|.+|+||++....++...|+|.+...   ....+....|.++++.+ +|||++.++|+|.
T Consensus        10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~---~d~deEiE~eynil~~~~~hpnv~~fyg~~~   86 (953)
T KOG0587|consen   10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT---EDEEEEIELEYNMLKKYSHHPNVATFYGAFI   86 (953)
T ss_pred             chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC---ccccHHHHHHHHHHHhccCCCCcceEEEEEE
Confidence            3444556667789999999999999999999988888888876533   23345577788888888 5999999999875


Q ss_pred             eee-cCCceEEEEEeccCCCCC
Q psy360          177 VTL-TKRKYIVLVTELMTSGTL  197 (199)
Q Consensus       177 ~~~-~~~~~~~lv~E~~~~G~L  197 (199)
                      ... ..++.+|||||||.||+.
T Consensus        87 k~~~~~~DqLWLVMEfC~gGSV  108 (953)
T KOG0587|consen   87 KKDPGNGDQLWLVMEFCGGGSV  108 (953)
T ss_pred             EecCCCCCeEEEEeeccCCccH
Confidence            322 356789999999999985

>KOG0582|consensus

Probab=99.20  E-value=1.3e-11  Score=95.47  Aligned_cols=51  Identities=25%  Similarity=0.462  Sum_probs=43.1

Q ss_pred             eeccCCCcccccccc-c--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHH
Q psy360           10 IRTQRTPEFMAPEMY-E--EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI   60 (199)
Q Consensus        10 ~~~~gt~~y~ape~~-~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~   60 (199)
                      .+.+||++|||||++ +  ..|+.|+||||||+...||..|..||......+.+
T Consensus       188 ~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvL  241 (516)
T KOG0582|consen  188 NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVL  241 (516)
T ss_pred             ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHH
Confidence            567999999999985 4  35999999999999999999999999875544433

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.19  E-value=9.9e-11  Score=94.32  Aligned_cols=78  Identities=18%  Similarity=0.118  Sum_probs=66.6

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ..|.+.+.||+|+||.||++.+..++..|++|....        ..+.+|+.++++++|+|||++++++.    ..+..+
T Consensus       169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~----~~~~~~  236 (461)
T PHA03211        169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRV----VGGLTC  236 (461)
T ss_pred             CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEE----ECCEEE
Confidence            358889999999999999999999999999986421        23568999999999999999999887    677889


Q ss_pred             EEEeccCCCCC
Q psy360          187 LVTELMTSGTL  197 (199)
Q Consensus       187 lv~E~~~~G~L  197 (199)
                      +|||++. |+|
T Consensus       237 lv~e~~~-~~L  246 (461)
T PHA03211        237 LVLPKYR-SDL  246 (461)
T ss_pred             EEEEccC-CCH
Confidence            9999986 454

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.19  E-value=9.7e-11  Score=87.38  Aligned_cols=82  Identities=22%  Similarity=0.395  Sum_probs=63.6

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHH-HhcCCCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEM-LKGLQHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      +.||+|+||.||+|.+..++..+|+|.+...... ......+..|..+ ....+|+|++++++++.    .++..|+|||
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~----~~~~~~lv~e   77 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ----SKDYLYLVME   77 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE----cCCeEEEEEe
Confidence            5689999999999999889999999988643322 1222334455444 44558999999999887    6788999999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+++|+|.
T Consensus        78 ~~~~~~L~   85 (260)
T cd05611          78 YLNGGDCA   85 (260)
T ss_pred             ccCCCCHH
Confidence            99999874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.19  E-value=1.1e-10  Score=90.81  Aligned_cols=93  Identities=24%  Similarity=0.342  Sum_probs=72.2

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec--C
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT--K  181 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~  181 (199)
                      ...++|.+.+.||+|+||.||++.+..++..+|+|.+..........+.+.+|+.++++++|+||+++++++.....  .
T Consensus        14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~   93 (345)
T cd07877          14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE   93 (345)
T ss_pred             hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccc
Confidence            34577899999999999999999998899999999886543333345668889999999999999999997752111  1


Q ss_pred             CceEEEEEeccCCCCC
Q psy360          182 RKYIVLVTELMTSGTL  197 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L  197 (199)
                      ....|++++++ +++|
T Consensus        94 ~~~~~lv~~~~-~~~L  108 (345)
T cd07877          94 FNDVYLVTHLM-GADL  108 (345)
T ss_pred             cccEEEEehhc-ccCH
Confidence            24578888876 5665

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>PHA02988 hypothetical protein; Provisional

Probab=99.19  E-value=3.1e-12  Score=96.93  Aligned_cols=55  Identities=18%  Similarity=0.443  Sum_probs=44.2

Q ss_pred             eccCCCccccccccc---ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYE---EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~---~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...||+.|+|||++.   +.++.++|+|||||++|||++|+.||... +..+.+..+..
T Consensus       179 ~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~-~~~~~~~~i~~  236 (283)
T PHA02988        179 KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENL-TTKEIYDLIIN  236 (283)
T ss_pred             cccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHh
Confidence            456899999999885   46999999999999999999999999763 44445555443

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.18  E-value=7.6e-11  Score=87.80  Aligned_cols=83  Identities=31%  Similarity=0.425  Sum_probs=67.8

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.+.||+|+||.||++...  +..+++|.+...    ...+.+.+|+.++++++|+|++++++++..   ..+..+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~   76 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVE---EKGGLY   76 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEc---CCCceE
Confidence            46788899999999999999764  567888887532    234568899999999999999999997541   456789


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      ++|||+++|+|.
T Consensus        77 lv~e~~~~~~L~   88 (256)
T cd05082          77 IVTEYMAKGSLV   88 (256)
T ss_pred             EEEECCCCCcHH
Confidence            999999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.18  E-value=5.7e-11  Score=87.98  Aligned_cols=80  Identities=29%  Similarity=0.363  Sum_probs=68.4

Q ss_pred             ecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEeccC
Q psy360          115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMT  193 (199)
Q Consensus       115 lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~~~  193 (199)
                      ||+|+||.||++.+..++..+++|.+...... ......+..|+.++++++|+||+++++.+.    .++..++||||++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~~v~e~~~   76 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ----TEEKLYLVLEYAP   76 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHee----cCCeeEEEEecCC
Confidence            69999999999999888999999988654332 224567889999999999999999999887    7888999999999


Q ss_pred             CCCCC
Q psy360          194 SGTLK  198 (199)
Q Consensus       194 ~G~L~  198 (199)
                      +++|.
T Consensus        77 ~~~L~   81 (250)
T cd05123          77 GGELF   81 (250)
T ss_pred             CCcHH
Confidence            99874

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.18  E-value=2.2e-10  Score=88.03  Aligned_cols=83  Identities=27%  Similarity=0.358  Sum_probs=69.7

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      .+.....||+|+||.||+|.+..++..+++|.+..... .....+.+.+|+.+++.++|+|++++++++.    ..+..|
T Consensus        22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~   97 (313)
T cd06633          22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYL----KEHTAW   97 (313)
T ss_pred             HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEE----eCCEEE
Confidence            36667889999999999999988999999998864332 2334467889999999999999999999887    678899


Q ss_pred             EEEeccCC
Q psy360          187 LVTELMTS  194 (199)
Q Consensus       187 lv~E~~~~  194 (199)
                      +||||+.+
T Consensus        98 lv~e~~~~  105 (313)
T cd06633          98 LVMEYCLG  105 (313)
T ss_pred             EEEecCCC
Confidence            99999964

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.18  E-value=6.1e-11  Score=89.52  Aligned_cols=84  Identities=30%  Similarity=0.439  Sum_probs=68.9

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeeeeeeeecCCceEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      |++.+.||+|+||.||+|....++..+++|.+...... .......+|+..+++++ |+||+++++++.    .++..++
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~----~~~~~~l   75 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFR----ENDELYF   75 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhh----cCCcEEE
Confidence            46778999999999999999888999999988644322 22334567999999999 999999999887    6788999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ||||+ +|+|.
T Consensus        76 v~e~~-~~~l~   85 (283)
T cd07830          76 VFEYM-EGNLY   85 (283)
T ss_pred             EEecC-CCCHH
Confidence            99999 67763

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG1187|consensus

Probab=99.18  E-value=1.7e-11  Score=95.66  Aligned_cols=55  Identities=24%  Similarity=0.289  Sum_probs=44.3

Q ss_pred             cCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhh
Q psy360           13 QRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGP-AQIYKKVVSV   67 (199)
Q Consensus        13 ~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~-~~~~~~i~~~   67 (199)
                      .||.+|+|||++. +..+.|+|||||||+|+||++|+.|.+..... ...+..|...
T Consensus       239 ~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~  295 (361)
T KOG1187|consen  239 MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKP  295 (361)
T ss_pred             CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHH
Confidence            8999999999886 89999999999999999999999988764322 2234555443

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.17  E-value=2.9e-11  Score=93.32  Aligned_cols=56  Identities=27%  Similarity=0.577  Sum_probs=45.3

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...+||+.|+|||++. +.++.++|+|||||++++|++|+.||... +....+..+..
T Consensus       159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~-~~~~~~~~i~~  215 (323)
T cd05616         159 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-DEDELFQSIME  215 (323)
T ss_pred             ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCC-CHHHHHHHHHh
Confidence            3568999999999876 56999999999999999999999999763 44444444443

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.17  E-value=1.8e-10  Score=88.33  Aligned_cols=88  Identities=24%  Similarity=0.334  Sum_probs=72.2

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..+.|+..+.||+|+||.||++.+..++..+++|.+..... .....+.+.+|+.+++.++|+|++++.+++.    ...
T Consensus        13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~   88 (308)
T cd06634          13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL----REH   88 (308)
T ss_pred             cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEE----cCC
Confidence            34457778899999999999999988899999998864322 3334566889999999999999999999887    678


Q ss_pred             eEEEEEeccCCCCC
Q psy360          184 YIVLVTELMTSGTL  197 (199)
Q Consensus       184 ~~~lv~E~~~~G~L  197 (199)
                      ..++||||+.+ +|
T Consensus        89 ~~~lv~e~~~~-~l  101 (308)
T cd06634          89 TAWLVMEYCLG-SA  101 (308)
T ss_pred             eeEEEEEccCC-CH
Confidence            89999999974 44

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.17  E-value=9.1e-11  Score=88.91  Aligned_cols=86  Identities=16%  Similarity=0.290  Sum_probs=69.4

Q ss_pred             cccceeecCccceeEEEEEEC---CCCcEEEEEEecccccC--HHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCC
Q psy360          109 LKFEEEIGRGSFKTVYRGLDT---QTGVAVAWCELQEKKLN--KAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~---~~~~~~a~k~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  182 (199)
                      |++.+.||+|+||.||++.+.   .++..+++|.+......  ....+.+.+|+.++.++ +|+||+++.+.+.    .+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~----~~   77 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQ----TD   77 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeee----cC
Confidence            677899999999999998753   45678999988643221  22345688999999999 5999999998876    67


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ...++||||+++|+|.
T Consensus        78 ~~~~lv~e~~~~~~L~   93 (288)
T cd05583          78 TKLHLILDYVNGGELF   93 (288)
T ss_pred             CEEEEEEecCCCCcHH
Confidence            8899999999999874

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0986|consensus

Probab=99.17  E-value=1.1e-11  Score=96.12  Aligned_cols=43  Identities=33%  Similarity=0.524  Sum_probs=39.7

Q ss_pred             ccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           12 TQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        12 ~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      -+||.+|||||++. +.|+...|+||+||++|||+.|+.||...
T Consensus       346 rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~  389 (591)
T KOG0986|consen  346 RVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQR  389 (591)
T ss_pred             ccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhh
Confidence            49999999999887 67999999999999999999999999754

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.17  E-value=9.7e-11  Score=90.90  Aligned_cols=88  Identities=22%  Similarity=0.266  Sum_probs=69.4

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee-cCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL-TKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~~  185 (199)
                      +.|++.+.||+|+||.||++.+..++..+++|.+............+.+|+.+++.++|+||+++++++.... ......
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            4678899999999999999999999999999998643323333456778999999999999999999775211 011358


Q ss_pred             EEEEeccCC
Q psy360          186 VLVTELMTS  194 (199)
Q Consensus       186 ~lv~E~~~~  194 (199)
                      |+||||+.+
T Consensus        85 ~lv~e~~~~   93 (337)
T cd07858          85 YIVYELMDT   93 (337)
T ss_pred             EEEEeCCCC
Confidence            999999963

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.17  E-value=1.5e-10  Score=87.61  Aligned_cols=83  Identities=29%  Similarity=0.352  Sum_probs=69.4

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~  185 (199)
                      +++...+.||+|+||.||++.+..++..+|+|.+..... ......+.+|+.++.++. |+||+++++++.    .....
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~----~~~~~   78 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD-EKEQKRLLMDLDVVMRSSDCPYIVKFYGALF----REGDC   78 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC-hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEe----cCCcE
Confidence            356667889999999999999999999999999864332 244567889999999996 999999999886    67788


Q ss_pred             EEEEeccCC
Q psy360          186 VLVTELMTS  194 (199)
Q Consensus       186 ~lv~E~~~~  194 (199)
                      +++|||+..
T Consensus        79 ~~~~e~~~~   87 (288)
T cd06616          79 WICMELMDI   87 (288)
T ss_pred             EEEEecccC
Confidence            999999864

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.17  E-value=1e-10  Score=88.51  Aligned_cols=86  Identities=27%  Similarity=0.364  Sum_probs=64.3

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC---CCCCccceeeeeeeee-cCCce
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL---QHPNIVSFYGYWEVTL-TKRKY  184 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~-~~~~~  184 (199)
                      |++.+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.+   +||||+++++++.... .....
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~   81 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK   81 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence            6778999999999999999999999999998864322222223455677666655   7999999999875221 12456


Q ss_pred             EEEEEeccCC
Q psy360          185 IVLVTELMTS  194 (199)
Q Consensus       185 ~~lv~E~~~~  194 (199)
                      .++||||+.+
T Consensus        82 ~~lv~e~~~~   91 (288)
T cd07863          82 VTLVFEHVDQ   91 (288)
T ss_pred             EEEEEccccc
Confidence            8999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG2052|consensus

Probab=99.16  E-value=2.7e-11  Score=93.61  Aligned_cols=89  Identities=24%  Similarity=0.337  Sum_probs=68.6

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC--CCCCccceeeeeeeeecC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL--QHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~~~  181 (199)
                      ...+...+.+.||+|.||.||+|.+++.  .||||.....     +...|.+|.+|.+..  +|+||+.+++.-..+...
T Consensus       208 TiarqI~L~e~IGkGRyGEVwrG~wrGe--~VAVKiF~sr-----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs  280 (513)
T KOG2052|consen  208 TIARQIVLQEIIGKGRFGEVWRGRWRGE--DVAVKIFSSR-----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGS  280 (513)
T ss_pred             hhhheeEEEEEecCccccceeeccccCC--ceEEEEeccc-----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCc
Confidence            4456688899999999999999998754  7788887532     235688888888765  899999999854321122


Q ss_pred             CceEEEEEeccCCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLKT  199 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~~  199 (199)
                      -..+|||.+|-++|+|.|
T Consensus       281 ~TQLwLvTdYHe~GSL~D  298 (513)
T KOG2052|consen  281 WTQLWLVTDYHEHGSLYD  298 (513)
T ss_pred             eEEEEEeeecccCCcHHH
Confidence            247899999999999975

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.16  E-value=3e-11  Score=95.32  Aligned_cols=44  Identities=25%  Similarity=0.517  Sum_probs=39.8

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ..+||+.|+|||++. ..++.++|+|||||+++||++|+.||...
T Consensus       207 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~  251 (382)
T cd05625         207 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQ  251 (382)
T ss_pred             ccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCC
Confidence            468999999999876 56999999999999999999999999764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.16  E-value=2.4e-10  Score=87.79  Aligned_cols=77  Identities=18%  Similarity=0.356  Sum_probs=61.4

Q ss_pred             ceeecCccceeEEEEEEC--CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEE
Q psy360          112 EEEIGRGSFKTVYRGLDT--QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVT  189 (199)
Q Consensus       112 ~~~lG~G~fg~v~~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~  189 (199)
                      .+.||+|+||.||+|.+.  .++..+|+|.+......    ..+.+|+.++++++||||+++++++..  ......++||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~~~lv~   79 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLS--HADRKVWLLF   79 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc----HHHHHHHHHHHhcCCCCCcceeeeEec--CCCcEEEEEE
Confidence            468999999999999865  46788999988644322    346789999999999999999997752  1356789999


Q ss_pred             eccCC
Q psy360          190 ELMTS  194 (199)
Q Consensus       190 E~~~~  194 (199)
                      ||+.+
T Consensus        80 e~~~~   84 (317)
T cd07868          80 DYAEH   84 (317)
T ss_pred             eccCC
Confidence            99875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.16  E-value=1.7e-10  Score=86.97  Aligned_cols=83  Identities=28%  Similarity=0.326  Sum_probs=65.1

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeeeeeeeecCCceEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      |++.+.||+|+||.||++.+..++..+++|.+....... ......+|+.++.++. |+|++++++++.+.  ..+..++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~--~~~~~~l   77 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL-EQVNNLREIQALRRLSPHPNILRLIEVLFDR--KTGRLAL   77 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc-hhhhHHHHHHHHhhcCCCCCccceEEEEecC--CCCcEEE
Confidence            466788999999999999999999999999886432222 2233457888899885 99999999988721  2278899


Q ss_pred             EEeccCC
Q psy360          188 VTELMTS  194 (199)
Q Consensus       188 v~E~~~~  194 (199)
                      ||||+++
T Consensus        78 v~e~~~~   84 (282)
T cd07831          78 VFELMDM   84 (282)
T ss_pred             EEecCCc
Confidence            9999975

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0596|consensus

Probab=99.16  E-value=1.9e-11  Score=96.83  Aligned_cols=55  Identities=20%  Similarity=0.377  Sum_probs=43.3

Q ss_pred             CccCcceeee-eccCCCccccccccc----c--------cCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360            1 MQCNKSYVNI-RTQRTPEFMAPEMYE----E--------HYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus         1 ~~~~~~~~~~-~~~gt~~y~ape~~~----~--------~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      |+.|.++... ..+||+.||+||.+.    +        +.+.++||||+|||||+|+.|+.||....
T Consensus       509 I~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~  576 (677)
T KOG0596|consen  509 IQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII  576 (677)
T ss_pred             cCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH
Confidence            4555555544 569999999999762    1        16689999999999999999999996543

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.16  E-value=9.1e-11  Score=87.30  Aligned_cols=81  Identities=32%  Similarity=0.450  Sum_probs=66.5

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.+.||+|+||.||++..  ++..+++|.+...    ...+.+.+|+.++++++|+|++++++++.     .+..+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~----~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~   74 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCD----VTAQAFLEETAVMTKLHHKNLVRLLGVIL-----HNGLY   74 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc--CCCceEEEeecCc----chHHHHHHHHHHHHhCCCCCcCeEEEEEc-----CCCcE
Confidence            4578899999999999999863  5667899887532    13456889999999999999999999875     34469


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        75 ~v~e~~~~~~L~   86 (254)
T cd05083          75 IVMELMSKGNLV   86 (254)
T ss_pred             EEEECCCCCCHH
Confidence            999999999884

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.15  E-value=2.7e-10  Score=86.14  Aligned_cols=81  Identities=25%  Similarity=0.325  Sum_probs=61.8

Q ss_pred             eecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHH---HHhcCCCCCccceeeeeeeeecCCceEEEEE
Q psy360          114 EIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAE---MLKGLQHPNIVSFYGYWEVTLTKRKYIVLVT  189 (199)
Q Consensus       114 ~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~---~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~  189 (199)
                      .||+|+||.||++.+..++..+|+|.+........ ....+.+|..   ++...+|+||+.+.+++.    ..+..++||
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~lv~   76 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFH----TPDKLCFIL   76 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEe----cCCeEEEEE
Confidence            48999999999999999999999998865433222 2223344443   344457999999999887    677899999


Q ss_pred             eccCCCCCC
Q psy360          190 ELMTSGTLK  198 (199)
Q Consensus       190 E~~~~G~L~  198 (199)
                      ||+++|+|.
T Consensus        77 e~~~~~~L~   85 (279)
T cd05633          77 DLMNGGDLH   85 (279)
T ss_pred             ecCCCCCHH
Confidence            999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.14  E-value=2.8e-10  Score=85.96  Aligned_cols=81  Identities=25%  Similarity=0.333  Sum_probs=62.0

Q ss_pred             eecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHH---HHHhcCCCCCccceeeeeeeeecCCceEEEEE
Q psy360          114 EIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEA---EMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVT  189 (199)
Q Consensus       114 ~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~---~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~  189 (199)
                      .||+|+||.||++.+..++..+|+|.+........ ....+..|.   .+++...|+||+++.+++.    ..+..++||
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~v~   76 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH----TPDKLSFIL   76 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeee----cCCEEEEEE
Confidence            47999999999999989999999999865433221 112233333   4455568999999999887    678899999


Q ss_pred             eccCCCCCC
Q psy360          190 ELMTSGTLK  198 (199)
Q Consensus       190 E~~~~G~L~  198 (199)
                      ||++||+|.
T Consensus        77 e~~~g~~L~   85 (278)
T cd05606          77 DLMNGGDLH   85 (278)
T ss_pred             ecCCCCcHH
Confidence            999999884

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.14  E-value=1.2e-10  Score=89.33  Aligned_cols=81  Identities=20%  Similarity=0.201  Sum_probs=64.1

Q ss_pred             ceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEec
Q psy360          112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTEL  191 (199)
Q Consensus       112 ~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~  191 (199)
                      .+.+|.|+  .|+.+....++..+|+|.+..........+.+.+|+.+++.++|+||+++++++.    ..+..+++|||
T Consensus         7 ~~~~~~~~--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~----~~~~~~~~~e~   80 (314)
T cd08216           7 GKCFEDLM--IVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFI----VDSELYVVSPL   80 (314)
T ss_pred             hHhhcCCc--eEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheee----cCCeEEEEEec
Confidence            33444444  4555555668899999998755445556678999999999999999999999887    67889999999


Q ss_pred             cCCCCCC
Q psy360          192 MTSGTLK  198 (199)
Q Consensus       192 ~~~G~L~  198 (199)
                      +++|+|.
T Consensus        81 ~~~~~l~   87 (314)
T cd08216          81 MAYGSCE   87 (314)
T ss_pred             cCCCCHH
Confidence            9999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0592|consensus

Probab=99.14  E-value=4.1e-11  Score=94.70  Aligned_cols=63  Identities=19%  Similarity=0.368  Sum_probs=50.3

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhccccC
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSA   72 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~~~~   72 (199)
                      ...++||..|++||++. +..+..+|+|+||||||+|+.|.+||... +.--.+++|+...+..+
T Consensus       244 ~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~-NeyliFqkI~~l~y~fp  307 (604)
T KOG0592|consen  244 RSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA-NEYLIFQKIQALDYEFP  307 (604)
T ss_pred             ccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc-cHHHHHHHHHHhcccCC
Confidence            35689999999999887 66899999999999999999999999763 33344566666655443

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.14  E-value=3.5e-10  Score=86.85  Aligned_cols=78  Identities=17%  Similarity=0.341  Sum_probs=61.8

Q ss_pred             ceeecCccceeEEEEEECC--CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEE
Q psy360          112 EEEIGRGSFKTVYRGLDTQ--TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVT  189 (199)
Q Consensus       112 ~~~lG~G~fg~v~~~~~~~--~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~  189 (199)
                      ...||+|+||.||+|....  ++..+|+|.+.....    ...+.+|+.++++++||||+++++++..  ..+...++||
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~~~lv~   79 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLS--HSDRKVWLLF   79 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEec--cCCCeEEEEE
Confidence            4679999999999998643  567899998864322    2347789999999999999999998752  1456789999


Q ss_pred             eccCCC
Q psy360          190 ELMTSG  195 (199)
Q Consensus       190 E~~~~G  195 (199)
                      ||+.++
T Consensus        80 e~~~~~   85 (317)
T cd07867          80 DYAEHD   85 (317)
T ss_pred             eeeCCc
Confidence            998863

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0986|consensus

Probab=99.14  E-value=2.5e-11  Score=94.18  Aligned_cols=96  Identities=26%  Similarity=0.345  Sum_probs=81.6

Q ss_pred             hhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcCCCCCccceeeeeee
Q psy360           99 EEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGLQHPNIVSFYGYWEV  177 (199)
Q Consensus        99 ~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~  177 (199)
                      .+.++...+.|+.-++||+|+||.|+-|+.+.+|+.+|.|++.++++... ......+|-.++.+++.+.||.|--.|+ 
T Consensus       177 lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfe-  255 (591)
T KOG0986|consen  177 LELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFE-  255 (591)
T ss_pred             HHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeec-
Confidence            33456667788889999999999999999999999999999876654433 2345788999999999999999988787 


Q ss_pred             eecCCceEEEEEeccCCCCCC
Q psy360          178 TLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~~~~~~~~lv~E~~~~G~L~  198 (199)
                         ..+.++|||..|+||+|+
T Consensus       256 ---Tkd~LClVLtlMNGGDLk  273 (591)
T KOG0986|consen  256 ---TKDALCLVLTLMNGGDLK  273 (591)
T ss_pred             ---CCCceEEEEEeecCCcee
Confidence               789999999999999985

>PTZ00284 protein kinase; Provisional

Probab=99.14  E-value=2.7e-11  Score=98.05  Aligned_cols=48  Identities=19%  Similarity=0.245  Sum_probs=41.6

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      .+..+||+.|+|||++. ..++.++|+|||||++|||++|+.||.....
T Consensus       302 ~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~  350 (467)
T PTZ00284        302 RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN  350 (467)
T ss_pred             cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence            34578999999999876 5699999999999999999999999976443

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.14  E-value=8.5e-11  Score=91.47  Aligned_cols=92  Identities=24%  Similarity=0.333  Sum_probs=71.3

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee--cCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL--TKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~  182 (199)
                      ..+.|++...||+|+||.||+|.+..++..+++|.+..........+.+.+|+.+++++.|+||+++.+++....  ...
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            345688999999999999999999999999999988644333334466788999999999999999988765110  011


Q ss_pred             ceEEEEEeccCCCCC
Q psy360          183 KYIVLVTELMTSGTL  197 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L  197 (199)
                      ...++|+||+ +++|
T Consensus        93 ~~~~lv~e~~-~~~L  106 (343)
T cd07851          93 QDVYLVTHLM-GADL  106 (343)
T ss_pred             ccEEEEEecC-CCCH
Confidence            2489999998 4565

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0200|consensus

Probab=99.13  E-value=1.4e-10  Score=96.55  Aligned_cols=93  Identities=30%  Similarity=0.398  Sum_probs=78.1

Q ss_pred             hhhhcccccccceeecCccceeEEEEEEC----C---CCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCcccee
Q psy360          101 ERESMRGYLKFEEEIGRGSFKTVYRGLDT----Q---TGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFY  172 (199)
Q Consensus       101 ~~~~~~~~~~~~~~lG~G~fg~v~~~~~~----~---~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~  172 (199)
                      .++..++++++.+.||+|.||+|++|...    .   ....||+|.+...... .+.+.+..|+.+|+.+ +|+||+.++
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~ll  368 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLL  368 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhhe
Confidence            56677778888889999999999998632    1   2567999998755444 6778899999999999 599999999


Q ss_pred             eeeeeeecCCceEEEEEeccCCCCCC
Q psy360          173 GYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       173 ~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      |+|.    .+...++|+||+..|+|.
T Consensus       369 G~~t----~~~~~~~v~Ey~~~G~L~  390 (609)
T KOG0200|consen  369 GACT----QDGPLYVIVEYAEHGDLL  390 (609)
T ss_pred             eeec----cCCceEEEEEeccCCcHH
Confidence            9997    688999999999999985

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.13  E-value=3.4e-11  Score=95.02  Aligned_cols=45  Identities=24%  Similarity=0.520  Sum_probs=40.2

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ..+||+.|+|||++. ..++.++|+|||||++|||++|+.||....
T Consensus       207 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~  252 (381)
T cd05626         207 SLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPT  252 (381)
T ss_pred             cccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCC
Confidence            468999999999876 568999999999999999999999997643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.13  E-value=2.4e-10  Score=88.66  Aligned_cols=88  Identities=22%  Similarity=0.265  Sum_probs=70.1

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee-cCCce
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL-TKRKY  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~  184 (199)
                      .++|++.+.||+|+||.||++.+..++..|++|.+.... .......+.+|+.++++++|+||+++++++.... .....
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   82 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND   82 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence            467899999999999999999999999999999885321 2233456788999999999999999998765211 12346


Q ss_pred             EEEEEeccCC
Q psy360          185 IVLVTELMTS  194 (199)
Q Consensus       185 ~~lv~E~~~~  194 (199)
                      .|+||||+.+
T Consensus        83 ~~lv~e~~~~   92 (336)
T cd07849          83 VYIVQELMET   92 (336)
T ss_pred             EEEEehhccc
Confidence            8999999975

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG4645|consensus

Probab=99.13  E-value=4e-12  Score=108.89  Aligned_cols=88  Identities=28%  Similarity=0.470  Sum_probs=74.5

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      +++....||.|.||+||.|.+..+|...|+|.+.-..........+.+|..++..|+|||+|+++|.-.    .++..+|
T Consensus      1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEv----HRekv~I 1311 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEV----HREKVYI 1311 (1509)
T ss_pred             eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceee----cHHHHHH
Confidence            355677899999999999999999999999988543333334456889999999999999999999765    7889999


Q ss_pred             EEeccCCCCCCC
Q psy360          188 VTELMTSGTLKT  199 (199)
Q Consensus       188 v~E~~~~G~L~~  199 (199)
                      -||||++|+|.+
T Consensus      1312 FMEyC~~GsLa~ 1323 (1509)
T KOG4645|consen 1312 FMEYCEGGSLAS 1323 (1509)
T ss_pred             HHHHhccCcHHH
Confidence            999999999863

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.13  E-value=6.1e-11  Score=91.05  Aligned_cols=56  Identities=29%  Similarity=0.558  Sum_probs=44.9

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|+.||... +..+.+..+..
T Consensus       151 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~-~~~~~~~~~~~  207 (312)
T cd05585         151 NTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE-NVNEMYRKILQ  207 (312)
T ss_pred             ccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC-CHHHHHHHHHc
Confidence            3568999999999876 56999999999999999999999999763 44444444443

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0612|consensus

Probab=99.12  E-value=3.7e-11  Score=101.92  Aligned_cols=62  Identities=23%  Similarity=0.481  Sum_probs=49.5

Q ss_pred             CcceeeeeccCCCccccccccc------ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            4 NKSYVNIRTQRTPEFMAPEMYE------EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         4 ~~~~~~~~~~gt~~y~ape~~~------~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      |.+-+...++|||.|++||+++      +.|+..+|+||+||++|||+.|..||+. .+.-+.+.+|..
T Consensus       228 dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa-dslveTY~KIm~  295 (1317)
T KOG0612|consen  228 DGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA-DSLVETYGKIMN  295 (1317)
T ss_pred             CCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH-HHHHHHHHHHhc
Confidence            4556677889999999999883      3599999999999999999999999975 444444444443

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.12  E-value=4.6e-11  Score=93.62  Aligned_cols=54  Identities=30%  Similarity=0.656  Sum_probs=43.5

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ..+||+.|+|||++. ..++.++|+|||||++++|++|..||... +.......+.
T Consensus       198 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~-~~~~~~~~i~  252 (364)
T cd05599         198 STVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSD-NPQETYRKII  252 (364)
T ss_pred             ccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCC-CHHHHHHHHH
Confidence            357999999999876 56999999999999999999999999764 3334444443

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.12  E-value=1.5e-10  Score=87.25  Aligned_cols=84  Identities=27%  Similarity=0.417  Sum_probs=70.7

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLV  188 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv  188 (199)
                      |+..+.||+|++|.||++.+..++..+++|.+............+.+|+.++++++|+||+++++++.    .++..++|
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~v   76 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR----HKGDLYLV   76 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhc----cCCCEEEE
Confidence            45678899999999999999889999999988655444334567889999999999999999999887    67889999


Q ss_pred             EeccCCCCC
Q psy360          189 TELMTSGTL  197 (199)
Q Consensus       189 ~E~~~~G~L  197 (199)
                      |||+++ +|
T Consensus        77 ~e~~~~-~l   84 (283)
T cd05118          77 FEFMDT-DL   84 (283)
T ss_pred             EeccCC-CH
Confidence            999975 44

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.12  E-value=1.9e-10  Score=87.97  Aligned_cols=89  Identities=25%  Similarity=0.318  Sum_probs=70.1

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee----cC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL----TK  181 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~  181 (199)
                      .++|++.+.||+|+||.||++.+..++..+++|.+............+.+|+.+++.++|+||+++++++....    ..
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            46789999999999999999999999999999988654332222345778999999999999999998764211    12


Q ss_pred             CceEEEEEeccCC
Q psy360          182 RKYIVLVTELMTS  194 (199)
Q Consensus       182 ~~~~~lv~E~~~~  194 (199)
                      ....++||||+.+
T Consensus        87 ~~~~~lv~~~~~~   99 (311)
T cd07866          87 RGSVYMVTPYMDH   99 (311)
T ss_pred             CceEEEEEecCCc
Confidence            3467999999875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG2345|consensus

Probab=99.11  E-value=2.9e-11  Score=87.12  Aligned_cols=92  Identities=14%  Similarity=0.129  Sum_probs=77.4

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee-cCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL-TKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~  183 (199)
                      -.++|++.+.||+|||+.|+.+....++..+|+|++....  .++.+...+|+...++++|||+++++++..... ....
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~   96 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH   96 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence            3467999999999999999999999999999999997653  556788999999999999999999998764211 1345


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..||++.|...|+|.
T Consensus        97 ~~yll~Pyy~~Gsl~  111 (302)
T KOG2345|consen   97 EAYLLLPYYKRGSLL  111 (302)
T ss_pred             eEEEEeehhccccHH
Confidence            799999999999875

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.11  E-value=2.2e-11  Score=95.37  Aligned_cols=54  Identities=31%  Similarity=0.628  Sum_probs=44.1

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ..+||+.|+|||++. ..++.++|+|||||++++|++|+.||... ++...+..+.
T Consensus       195 ~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~-~~~~~~~~i~  249 (360)
T cd05627         195 STVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE-TPQETYRKVM  249 (360)
T ss_pred             ccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCC-CHHHHHHHHH
Confidence            468999999999876 56999999999999999999999999763 4444444444

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0667|consensus

Probab=99.10  E-value=2.5e-10  Score=91.88  Aligned_cols=80  Identities=31%  Similarity=0.403  Sum_probs=68.4

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CC-----Cccceeeeeeeeec
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HP-----NIVSFYGYWEVTLT  180 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~  180 (199)
                      -.|.+++.||+|.||+|.+|.+..+++.||+|.++..   .....+...|+.+|..|+ |.     |+|++++||.    
T Consensus       186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~----  258 (586)
T KOG0667|consen  186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFY----  258 (586)
T ss_pred             EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccc----
Confidence            3678899999999999999999999999999999643   333455678999999997 43     8999999998    


Q ss_pred             CCceEEEEEeccC
Q psy360          181 KRKYIVLVTELMT  193 (199)
Q Consensus       181 ~~~~~~lv~E~~~  193 (199)
                      .++++|||+|.+.
T Consensus       259 fr~HlciVfELL~  271 (586)
T KOG0667|consen  259 FRNHLCIVFELLS  271 (586)
T ss_pred             cccceeeeehhhh
Confidence            8999999999875

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.10  E-value=4.7e-11  Score=94.05  Aligned_cols=54  Identities=26%  Similarity=0.569  Sum_probs=43.5

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ..+||+.|+|||++. ..++.++|+|||||+++||++|..||... +....+..+.
T Consensus       207 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~-~~~~~~~~i~  261 (377)
T cd05629         207 STVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSE-NSHETYRKII  261 (377)
T ss_pred             ccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCC-CHHHHHHHHH
Confidence            357999999999876 56999999999999999999999999763 3334444443

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0983|consensus

Probab=99.10  E-value=7.5e-11  Score=86.35  Aligned_cols=58  Identities=31%  Similarity=0.688  Sum_probs=49.5

Q ss_pred             eeeccCCCccccccccc----ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            9 NIRTQRTPEFMAPEMYE----EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~----~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      .++..|++.|||||-+.    ..|+..+|||||||.|+||.||+.||..+....+.+.+++.
T Consensus       248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln  309 (391)
T KOG0983|consen  248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN  309 (391)
T ss_pred             cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh
Confidence            45678999999999764    35999999999999999999999999987777677766665

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.10  E-value=9e-11  Score=88.46  Aligned_cols=84  Identities=27%  Similarity=0.404  Sum_probs=70.0

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLV  188 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv  188 (199)
                      |+..+.||+|+||.||+|....++..+++|.+..........+.+..|+.++++++|+|++++++++.    ..+..++|
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~----~~~~~~~v   76 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIH----TERKLYLV   76 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhh----cCCceEEE
Confidence            35567899999999999999999999999998754323334466788999999999999999999887    66889999


Q ss_pred             EeccCCCCC
Q psy360          189 TELMTSGTL  197 (199)
Q Consensus       189 ~E~~~~G~L  197 (199)
                      |||+++ +|
T Consensus        77 ~e~~~~-~l   84 (282)
T cd07829          77 FEYCDM-DL   84 (282)
T ss_pred             ecCcCc-CH
Confidence            999984 55

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.10  E-value=7.8e-10  Score=80.35  Aligned_cols=85  Identities=36%  Similarity=0.579  Sum_probs=72.3

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLV  188 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv  188 (199)
                      |.+.+.||+|++|.||++....++..+++|.+...... ...+.+.+|+..+.+++|+|++++++++.    ..+..+++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~----~~~~~~~v   75 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFE----DPEPLYLV   75 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeee----cCCceEEE
Confidence            35678899999999999999888899999998654322 24567889999999999999999999887    67889999


Q ss_pred             EeccCCCCCC
Q psy360          189 TELMTSGTLK  198 (199)
Q Consensus       189 ~E~~~~G~L~  198 (199)
                      +||+++++|.
T Consensus        76 ~e~~~~~~L~   85 (225)
T smart00221       76 MEYCEGGDLF   85 (225)
T ss_pred             EeccCCCCHH
Confidence            9999998874

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0197|consensus

Probab=99.10  E-value=2e-11  Score=95.93  Aligned_cols=58  Identities=21%  Similarity=0.449  Sum_probs=42.6

Q ss_pred             CCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHHhhccccCCC
Q psy360           15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVVSVSITSAGP   74 (199)
Q Consensus        15 t~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~~~~~~~~~~   74 (199)
                      ...|.|||.+. +++|.|||||||||+|+||+| |+.|+... +..+.+. .+......+.|
T Consensus       367 PIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m-sn~ev~~-~le~GyRlp~P  426 (468)
T KOG0197|consen  367 PIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM-SNEEVLE-LLERGYRLPRP  426 (468)
T ss_pred             CceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC-CHHHHHH-HHhccCcCCCC
Confidence            45899999887 899999999999999999998 88888764 3333433 33333433333

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.10  E-value=3e-10  Score=88.34  Aligned_cols=89  Identities=21%  Similarity=0.230  Sum_probs=70.4

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee------
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL------  179 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  179 (199)
                      ..+|.+.+.||.|+||.||+|.+..++..+++|.+.....  ...+.+.+|+.++++++|+||+++++++....      
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~   81 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED   81 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence            4678899999999999999999999999999998854432  33466888999999999999999998654210      


Q ss_pred             ----cCCceEEEEEeccCCCCC
Q psy360          180 ----TKRKYIVLVTELMTSGTL  197 (199)
Q Consensus       180 ----~~~~~~~lv~E~~~~G~L  197 (199)
                          ......++||||+.+ +|
T Consensus        82 ~~~~~~~~~~~lv~e~~~~-~L  102 (342)
T cd07854          82 VGSLTELNSVYIVQEYMET-DL  102 (342)
T ss_pred             cccccccceEEEEeecccc-cH
Confidence                012367999999974 54

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.09  E-value=1e-10  Score=92.05  Aligned_cols=55  Identities=22%  Similarity=0.525  Sum_probs=43.8

Q ss_pred             eccCCCcccccccccc-----cCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYEE-----HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~~-----~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ..+||+.|||||++.+     .++.++|+|||||++|+|++|+.||.. .+....+..+..
T Consensus       202 ~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~-~~~~~~~~~i~~  261 (371)
T cd05622         202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTYSKIMN  261 (371)
T ss_pred             CcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC-CCHHHHHHHHHc
Confidence            5679999999998752     278999999999999999999999976 344444455543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0032|consensus

Probab=99.09  E-value=1.7e-10  Score=90.40  Aligned_cols=64  Identities=20%  Similarity=0.366  Sum_probs=52.5

Q ss_pred             ceeeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhccc
Q psy360            6 SYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT   70 (199)
Q Consensus         6 ~~~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~~   70 (199)
                      ......+|||+.|+|||++. ..++..+|+||.||++|.|++|..||..... ...+..+....+.
T Consensus       192 ~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~-~~~~~~i~~~~~~  256 (382)
T KOG0032|consen  192 GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETE-FEIFLAILRGDFD  256 (382)
T ss_pred             CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCCh-hHHHHHHHcCCCC
Confidence            55677899999999999988 7899999999999999999999999987433 3444566665553

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.09  E-value=1.1e-10  Score=90.02  Aligned_cols=56  Identities=25%  Similarity=0.514  Sum_probs=44.9

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|+.||.. .+....+..+..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~-~~~~~~~~~i~~  210 (320)
T cd05590         154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEA-ENEDDLFEAILN  210 (320)
T ss_pred             cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCC-CCHHHHHHHHhc
Confidence            3568999999999886 5689999999999999999999999976 344444444443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0984|consensus

Probab=99.09  E-value=1.2e-10  Score=82.01  Aligned_cols=55  Identities=33%  Similarity=0.556  Sum_probs=47.3

Q ss_pred             ccCCCccccccccc-----ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           12 TQRTPEFMAPEMYE-----EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        12 ~~gt~~y~ape~~~-----~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ..|+-+|||||.+.     ..|+.|+|+||+|+.+.||.+++.|++.-..+.+.+++++.
T Consensus       208 daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe  267 (282)
T KOG0984|consen  208 DAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE  267 (282)
T ss_pred             hcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence            46888999999774     24899999999999999999999999887777777777765

>KOG0696|consensus

Probab=99.09  E-value=2.4e-11  Score=93.56  Aligned_cols=88  Identities=19%  Similarity=0.209  Sum_probs=73.0

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCc
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..+|.++.+||+|+||+|.++..+++.+.+|+|.+.+....+. +.+-...|-++|... +.|.+++|+.+|.    ..+
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQ----TmD  423 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQ----TMD  423 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhh----hhh
Confidence            3467889999999999999999999999999999876644332 334455677777766 5789999999998    789


Q ss_pred             eEEEEEeccCCCCC
Q psy360          184 YIVLVTELMTSGTL  197 (199)
Q Consensus       184 ~~~lv~E~~~~G~L  197 (199)
                      ++|+||||+.||+|
T Consensus       424 RLyFVMEyvnGGDL  437 (683)
T KOG0696|consen  424 RLYFVMEYVNGGDL  437 (683)
T ss_pred             heeeEEEEecCchh
Confidence            99999999999998

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.09  E-value=3.9e-10  Score=87.71  Aligned_cols=89  Identities=21%  Similarity=0.312  Sum_probs=69.9

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec--CCc
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT--KRK  183 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~~  183 (199)
                      .+.|...+.||+|+||.||+|.+..++..+|+|.+............+.+|+.+++.++|+||+++++++.....  ...
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            456888999999999999999998899999999886543333334568899999999999999999998752111  123


Q ss_pred             eEEEEEeccCC
Q psy360          184 YIVLVTELMTS  194 (199)
Q Consensus       184 ~~~lv~E~~~~  194 (199)
                      ..++||||+.+
T Consensus        94 ~~~lv~e~~~~  104 (342)
T cd07879          94 DFYLVMPYMQT  104 (342)
T ss_pred             eEEEEeccccc
Confidence            56999999864

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.09  E-value=1.4e-10  Score=89.53  Aligned_cols=55  Identities=25%  Similarity=0.578  Sum_probs=44.3

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ..+||+.|+|||++. +.++.++|+|||||++++|++|+.||... +.......+..
T Consensus       160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~-~~~~~~~~i~~  215 (323)
T cd05615         160 TFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE-DEDELFQSIME  215 (323)
T ss_pred             CccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCC-CHHHHHHHHHh
Confidence            457999999999876 56999999999999999999999999763 34444444443

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.08  E-value=2.9e-10  Score=87.84  Aligned_cols=87  Identities=24%  Similarity=0.356  Sum_probs=69.9

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee-cCCceEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL-TKRKYIV  186 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~~~  186 (199)
                      +|++.+.||+|+||.||++.+..++..+++|.+..........+.+.+|+.+++.++|+||+++.+++.... ......|
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            367889999999999999999888999999988654322445567899999999999999999999876211 1123789


Q ss_pred             EEEeccCC
Q psy360          187 LVTELMTS  194 (199)
Q Consensus       187 lv~E~~~~  194 (199)
                      ++|||+.+
T Consensus        81 lv~e~~~~   88 (330)
T cd07834          81 IVTELMET   88 (330)
T ss_pred             EEecchhh
Confidence            99999984

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.08  E-value=1.9e-10  Score=88.76  Aligned_cols=54  Identities=28%  Similarity=0.599  Sum_probs=43.7

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ..+||+.|+|||++. ..++.++|+|||||++++|++|+.||... +....+..+.
T Consensus       160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~-~~~~~~~~i~  214 (324)
T cd05587         160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE-DEDELFQSIM  214 (324)
T ss_pred             eecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC-CHHHHHHHHH
Confidence            468999999999887 56899999999999999999999999763 3344444443

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.08  E-value=8.9e-11  Score=90.61  Aligned_cols=55  Identities=27%  Similarity=0.597  Sum_probs=44.0

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|+.||.. .+.......+.
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~-~~~~~~~~~~~  208 (323)
T cd05571         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELIL  208 (323)
T ss_pred             cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCC-CCHHHHHHHHH
Confidence            3568999999999886 5699999999999999999999999976 33334444333

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.08  E-value=3.9e-11  Score=94.47  Aligned_cols=45  Identities=24%  Similarity=0.495  Sum_probs=40.2

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ..+||+.|||||++. ..++.++|+|||||++|+|++|+.||....
T Consensus       203 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~  248 (376)
T cd05598         203 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADT  248 (376)
T ss_pred             ccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCC
Confidence            468999999999886 569999999999999999999999997643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.08  E-value=1.1e-10  Score=90.42  Aligned_cols=55  Identities=27%  Similarity=0.570  Sum_probs=44.3

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ..+||+.|+|||++. ..++.++|+|||||++|+|++|+.||.. .+....+..+..
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~-~~~~~~~~~i~~  229 (329)
T PTZ00263        174 TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFD-DTPFRIYEKILA  229 (329)
T ss_pred             eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCC-CCHHHHHHHHhc
Confidence            468999999999876 5689999999999999999999999976 344444444443

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.08  E-value=1.1e-10  Score=88.50  Aligned_cols=45  Identities=29%  Similarity=0.437  Sum_probs=40.1

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ....||+.|+|||++. +.++.++|+|||||++++|++|+.||...
T Consensus       159 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~  204 (285)
T cd05631         159 RGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKR  204 (285)
T ss_pred             cCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCC
Confidence            3457999999999886 57999999999999999999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.08  E-value=1.9e-10  Score=88.82  Aligned_cols=54  Identities=28%  Similarity=0.618  Sum_probs=43.5

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ..+||+.|+|||++. +.++.++|+|||||++|+|++|+.||... +.......+.
T Consensus       154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~-~~~~~~~~~~  208 (323)
T cd05595         154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-DHERLFELIL  208 (323)
T ss_pred             cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCC-CHHHHHHHHh
Confidence            467999999999876 56899999999999999999999999753 3334444433

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG4721|consensus

Probab=99.08  E-value=7.7e-11  Score=94.05  Aligned_cols=85  Identities=26%  Similarity=0.318  Sum_probs=67.1

Q ss_pred             hhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360           99 EEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus        99 ~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      .+.|++..+-...+.=||+|+-|.||+|+..  +..||||+++.-         -..+|.-|++|+|+||+.+.|.|.  
T Consensus       116 ~e~WeiPFe~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~el---------kETdIKHLRkLkH~NII~FkGVCt--  182 (904)
T KOG4721|consen  116 EELWEIPFEEISELEWLGSGAQGAVFLGRLH--NETVAVKKVREL---------KETDIKHLRKLKHPNIITFKGVCT--  182 (904)
T ss_pred             hhhccCCHHHhhhhhhhccCcccceeeeecc--CceehhHHHhhh---------hhhhHHHHHhccCcceeeEeeeec--
Confidence            3445555555666777999999999999754  458899876421         124688899999999999999997  


Q ss_pred             ecCCceEEEEEeccCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~  198 (199)
                        ...-.+||||||+.|-|.
T Consensus       183 --qsPcyCIiMEfCa~GqL~  200 (904)
T KOG4721|consen  183 --QSPCYCIIMEFCAQGQLY  200 (904)
T ss_pred             --CCceeEEeeeccccccHH
Confidence              778889999999999774

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.08  E-value=1.2e-10  Score=89.74  Aligned_cols=56  Identities=27%  Similarity=0.545  Sum_probs=45.0

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|+.||.. .+....+..+..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~-~~~~~~~~~i~~  210 (321)
T cd05591         154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEA-DNEDDLFESILH  210 (321)
T ss_pred             cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCC-CCHHHHHHHHHc
Confidence            3567999999999876 5699999999999999999999999976 344444444443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.08  E-value=9.1e-11  Score=91.25  Aligned_cols=55  Identities=25%  Similarity=0.491  Sum_probs=44.3

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ..+||+.|||||++. ..++.++|+|||||++|+|++|..||... +.......+..
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~-~~~~~~~~i~~  242 (340)
T PTZ00426        187 TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYAN-EPLLIYQKILE  242 (340)
T ss_pred             eecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCC-CHHHHHHHHhc
Confidence            568999999999876 45899999999999999999999999763 44344444443

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.07  E-value=1.7e-10  Score=89.11  Aligned_cols=55  Identities=25%  Similarity=0.385  Sum_probs=43.7

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ..+||+.|+|||++. ..++.++|+|||||++++|++|+.||... +.......+..
T Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~-~~~~~~~~~~~  214 (323)
T cd05584         159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAE-NRKKTIDKILK  214 (323)
T ss_pred             ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCC-CHHHHHHHHHc
Confidence            458999999999876 56889999999999999999999999763 33334444443

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.07  E-value=1.5e-10  Score=89.66  Aligned_cols=54  Identities=28%  Similarity=0.637  Sum_probs=42.9

Q ss_pred             eccCCCccccccccc------ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE------EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~------~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ..+||+.|+|||++.      +.++.++|+|||||++++|++|+.||... +..+.+..+.
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~-~~~~~~~~i~  221 (332)
T cd05623         162 VAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYGKIM  221 (332)
T ss_pred             ccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC-CHHHHHHHHh
Confidence            458999999999774      34889999999999999999999999763 4444444443

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.07  E-value=1.7e-10  Score=89.32  Aligned_cols=44  Identities=34%  Similarity=0.667  Sum_probs=39.7

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|+.||..
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~  197 (328)
T cd05593         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN  197 (328)
T ss_pred             ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCC
Confidence            3568999999999886 5689999999999999999999999975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.07  E-value=1.9e-10  Score=88.49  Aligned_cols=54  Identities=28%  Similarity=0.624  Sum_probs=43.4

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV   64 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i   64 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|+.||... +..+.+..+
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~-~~~~~~~~i  208 (316)
T cd05592         154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGE-DEDELFDSI  208 (316)
T ss_pred             ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCC-CHHHHHHHH
Confidence            3568999999999876 56899999999999999999999999763 333444333

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.07  E-value=1.5e-10  Score=91.07  Aligned_cols=55  Identities=22%  Similarity=0.538  Sum_probs=43.6

Q ss_pred             eccCCCcccccccccc-----cCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYEE-----HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~~-----~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ..+||+.|||||++.+     .++.++|+||+||++|+|++|+.||... +....+..+..
T Consensus       202 ~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~-~~~~~~~~i~~  261 (370)
T cd05621         202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD-SLVGTYSKIMD  261 (370)
T ss_pred             cCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC-CHHHHHHHHHh
Confidence            5689999999998752     2789999999999999999999999763 44444455543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.07  E-value=2.1e-10  Score=88.56  Aligned_cols=56  Identities=29%  Similarity=0.554  Sum_probs=44.4

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...+||+.|||||++. ..++.++|+|||||++|+|++|+.||... +.......+..
T Consensus       159 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~-~~~~~~~~i~~  215 (324)
T cd05589         159 STFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGD-DEEEVFDSIVN  215 (324)
T ss_pred             cccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCC-CHHHHHHHHHh
Confidence            3568999999999876 56899999999999999999999999753 33444444443

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.07  E-value=1.6e-10  Score=87.90  Aligned_cols=55  Identities=31%  Similarity=0.608  Sum_probs=44.1

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ..+||+.|+|||++. ..++.++|+|||||++|+|++|+.||... +.......+..
T Consensus       157 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~-~~~~~~~~i~~  212 (291)
T cd05612         157 TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD-NPFGIYEKILA  212 (291)
T ss_pred             cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHh
Confidence            457999999999876 55899999999999999999999999763 44444444443

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.06  E-value=1.2e-10  Score=89.82  Aligned_cols=56  Identities=29%  Similarity=0.571  Sum_probs=45.2

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|..||.. .+..+.+..+..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~-~~~~~~~~~i~~  210 (323)
T cd05575         154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYS-RDTAEMYDNILN  210 (323)
T ss_pred             ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCC-CCHHHHHHHHHc
Confidence            3568999999999876 5689999999999999999999999976 344445454443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.06  E-value=2.3e-10  Score=88.09  Aligned_cols=54  Identities=26%  Similarity=0.543  Sum_probs=43.7

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV   64 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i   64 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|+.||... +....++.+
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~-~~~~~~~~~  208 (316)
T cd05620         154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD-DEDELFESI  208 (316)
T ss_pred             eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC-CHHHHHHHH
Confidence            4568999999999886 56999999999999999999999999753 343444333

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.06  E-value=1.4e-10  Score=89.50  Aligned_cols=57  Identities=28%  Similarity=0.565  Sum_probs=45.1

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ....+||+.|+|||++. ..++.++|+|||||++++|++|..||.. .+....+..+..
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~-~~~~~~~~~i~~  210 (325)
T cd05602         153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS-RNTAEMYDNILN  210 (325)
T ss_pred             cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCC-CCHHHHHHHHHh
Confidence            34568999999999876 5699999999999999999999999975 344444444443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.06  E-value=1.3e-10  Score=89.52  Aligned_cols=55  Identities=31%  Similarity=0.575  Sum_probs=44.4

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++|+|++|..||... +....+..+.
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~i~  209 (321)
T cd05603         154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR-DVSQMYDNIL  209 (321)
T ss_pred             ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC-CHHHHHHHHh
Confidence            3568999999999876 56899999999999999999999999763 4444444444

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0580|consensus

Probab=99.05  E-value=2.1e-10  Score=82.32  Aligned_cols=66  Identities=23%  Similarity=0.357  Sum_probs=55.6

Q ss_pred             ceeeeeccCCCcccccccccc-cCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhccccC
Q psy360            6 SYVNIRTQRTPEFMAPEMYEE-HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSA   72 (199)
Q Consensus         6 ~~~~~~~~gt~~y~ape~~~~-~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~~~~   72 (199)
                      +....+.|||+.|.+||+..+ .++.++|+|++||+++|++.|..||.. .+..+.++++.+..+..+
T Consensus       176 ~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes-~~~~etYkrI~k~~~~~p  242 (281)
T KOG0580|consen  176 SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFES-QSHSETYKRIRKVDLKFP  242 (281)
T ss_pred             CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhh-hhhHHHHHHHHHccccCC
Confidence            445668899999999999984 699999999999999999999999987 447778888887665443

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.05  E-value=2.6e-10  Score=87.80  Aligned_cols=53  Identities=26%  Similarity=0.591  Sum_probs=43.2

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKK   63 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~   63 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++|+|++|+.||... +....+..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~-~~~~~~~~  207 (316)
T cd05619         154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGH-DEEELFQS  207 (316)
T ss_pred             eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCC-CHHHHHHH
Confidence            3568999999999876 56899999999999999999999999763 34444433

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG1152|consensus

Probab=99.05  E-value=1.3e-10  Score=92.77  Aligned_cols=80  Identities=19%  Similarity=0.332  Sum_probs=66.7

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH------HHHHHHHHHHHHhcCC---CCCccceeeeeeee
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA------ERARFREEAEMLKGLQ---HPNIVSFYGYWEVT  178 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~------~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~  178 (199)
                      .|..+..+|.|+||+|+.|.++.....|.+|.+.+.+.-.+      .....-.|++||..++   |+||++++++|+  
T Consensus       562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE--  639 (772)
T KOG1152|consen  562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE--  639 (772)
T ss_pred             cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee--
Confidence            47778999999999999999999999999999876543211      1233557999999997   999999999999  


Q ss_pred             ecCCceEEEEEec
Q psy360          179 LTKRKYIVLVTEL  191 (199)
Q Consensus       179 ~~~~~~~~lv~E~  191 (199)
                        ++++.||+||-
T Consensus       640 --ddd~yyl~te~  650 (772)
T KOG1152|consen  640 --DDDYYYLETEV  650 (772)
T ss_pred             --cCCeeEEEecC
Confidence              88999999983

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.05  E-value=1.1e-09  Score=82.70  Aligned_cols=82  Identities=29%  Similarity=0.371  Sum_probs=63.9

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC---CCCCccceeeeeeeeecCCce-
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL---QHPNIVSFYGYWEVTLTKRKY-  184 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~~~-  184 (199)
                      |++.+.||+|+||.||++.+..++..+++|.+............+.+|+.++.++   +|+|++++++++.    ..+. 
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~----~~~~~   76 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCH----GPRTD   76 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEe----eccCC
Confidence            4677899999999999999988899999999864433322334566777776655   6999999999887    3333 


Q ss_pred             ----EEEEEeccCC
Q psy360          185 ----IVLVTELMTS  194 (199)
Q Consensus       185 ----~~lv~E~~~~  194 (199)
                          .+++|||+.+
T Consensus        77 ~~~~~~l~~e~~~~   90 (287)
T cd07838          77 RELKLTLVFEHVDQ   90 (287)
T ss_pred             CCceeEEEehhccc
Confidence                8999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG1095|consensus

Probab=99.05  E-value=4.1e-11  Score=102.06  Aligned_cols=60  Identities=20%  Similarity=0.411  Sum_probs=44.1

Q ss_pred             ceeeeeccCC--Cccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHHh
Q psy360            6 SYVNIRTQRT--PEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         6 ~~~~~~~~gt--~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~~   66 (199)
                      .+...+..+.  ..|||||.+. +.+|.|+|||||||+|||++| |..||....+ .+++..+..
T Consensus       856 ~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n-~~v~~~~~~  919 (1025)
T KOG1095|consen  856 DYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN-FEVLLDVLE  919 (1025)
T ss_pred             hheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch-HHHHHHHHh
Confidence            3444444443  4899999887 889999999999999999998 8888876444 344444443

>KOG0599|consensus

Probab=99.04  E-value=1.3e-10  Score=85.09  Aligned_cols=73  Identities=19%  Similarity=0.276  Sum_probs=54.8

Q ss_pred             ccCcceeeeeccCCCccccccccc-------ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhccccCCC
Q psy360            2 QCNKSYVNIRTQRTPEFMAPEMYE-------EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAGP   74 (199)
Q Consensus         2 ~~~~~~~~~~~~gt~~y~ape~~~-------~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~~~~~~   74 (199)
                      |.+-+......||||+|.|||.++       ..|+..+|.|+.|||+|-|+.|..||-.... --+++.+....+.+.++
T Consensus       172 ~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ-mlMLR~ImeGkyqF~sp  250 (411)
T KOG0599|consen  172 QLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ-MLMLRMIMEGKYQFRSP  250 (411)
T ss_pred             ccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH-HHHHHHHHhcccccCCc
Confidence            344455566789999999999873       3499999999999999999999999975321 12346666676666655


Q ss_pred             c
Q psy360           75 K   75 (199)
Q Consensus        75 ~   75 (199)
                      .
T Consensus       251 e  251 (411)
T KOG0599|consen  251 E  251 (411)
T ss_pred             c
Confidence            3

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.04  E-value=1e-09  Score=87.01  Aligned_cols=79  Identities=14%  Similarity=0.148  Sum_probs=64.9

Q ss_pred             cccccccceeecCccceeEEEEEEC--CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDT--QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ....|.+.+.||+|+||.||+|...  ..+..+++|.+...       ....+|+.++++++|+||+++++++.    ..
T Consensus        90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~----~~  158 (392)
T PHA03207         90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYR----WK  158 (392)
T ss_pred             ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEe----eC
Confidence            4457899999999999999999754  35677888877532       22467999999999999999999887    67


Q ss_pred             ceEEEEEeccCC
Q psy360          183 KYIVLVTELMTS  194 (199)
Q Consensus       183 ~~~~lv~E~~~~  194 (199)
                      ...++||||+.+
T Consensus       159 ~~~~lv~e~~~~  170 (392)
T PHA03207        159 STVCMVMPKYKC  170 (392)
T ss_pred             CEEEEEehhcCC
Confidence            889999999864

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.04  E-value=1e-09  Score=82.42  Aligned_cols=81  Identities=19%  Similarity=0.185  Sum_probs=61.0

Q ss_pred             cccccceee--cCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCc
Q psy360          107 GYLKFEEEI--GRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       107 ~~~~~~~~l--G~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~  183 (199)
                      +.+++.+.+  |+|+||.||++....++..+++|.+........       |+.....+ +|+||+++++++.    ..+
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-------e~~~~~~~~~h~~iv~~~~~~~----~~~   82 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-------EPMVHQLMKDNPNFIKLYYSVT----TLK   82 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-------hHHHHHHhhcCCCEEEEEEEEe----cCC
Confidence            345555554  999999999999999999999998864332211       22222222 6999999999887    677


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus        83 ~~~iv~e~~~~~~L~   97 (267)
T PHA03390         83 GHVLIMDYIKDGDLF   97 (267)
T ss_pred             eeEEEEEcCCCCcHH
Confidence            899999999999985

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.04  E-value=1.9e-10  Score=89.08  Aligned_cols=53  Identities=25%  Similarity=0.540  Sum_probs=43.3

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV   64 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i   64 (199)
                      ..+||+.|+|||++. ..++.++|+|||||++|+|++|..||.. .+....+..+
T Consensus       157 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~-~~~~~~~~~i  210 (333)
T cd05600         157 SVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSG-STPNETWENL  210 (333)
T ss_pred             CcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCC-CCHHHHHHHH
Confidence            468999999999886 5699999999999999999999999976 3444444333

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.04  E-value=2.6e-10  Score=87.86  Aligned_cols=55  Identities=24%  Similarity=0.545  Sum_probs=43.9

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|+.||.. .+.......+.
T Consensus       154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~-~~~~~~~~~i~  209 (318)
T cd05570         154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEG-DDEDELFQSIL  209 (318)
T ss_pred             cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCC-CCHHHHHHHHH
Confidence            3467999999999876 5699999999999999999999999975 33444444433

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.04  E-value=1.2e-10  Score=89.93  Aligned_cols=56  Identities=29%  Similarity=0.540  Sum_probs=45.0

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...+||+.|||||++. +.++.++|+|||||++++|++|..||.. .+..+.+..+..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~-~~~~~~~~~~~~  210 (325)
T cd05604         154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYC-RDVAEMYDNILH  210 (325)
T ss_pred             ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCC-CCHHHHHHHHHc
Confidence            3568999999999876 5689999999999999999999999976 344444444443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG1026|consensus

Probab=99.04  E-value=3.5e-11  Score=99.34  Aligned_cols=53  Identities=19%  Similarity=0.413  Sum_probs=42.4

Q ss_pred             CCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHHhhc
Q psy360           15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus        15 t~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      ...||+||.+. ++||.+||||||||+|||+++ |+.|+... +.++....+....
T Consensus       668 PIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~gl-Sn~EVIe~i~~g~  722 (774)
T KOG1026|consen  668 PIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGL-SNQEVIECIRAGQ  722 (774)
T ss_pred             eeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccccc-chHHHHHHHHcCC
Confidence            34899999665 999999999999999999998 99999884 4445555555443

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.03  E-value=2.6e-10  Score=89.72  Aligned_cols=55  Identities=22%  Similarity=0.523  Sum_probs=43.5

Q ss_pred             eccCCCcccccccccc-----cCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYEE-----HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~~-----~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ..+||+.|||||++.+     .++.++|+|||||++|+|++|+.||.. .+....+..+..
T Consensus       202 ~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~-~~~~~~~~~i~~  261 (370)
T cd05596         202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTYSKIMD  261 (370)
T ss_pred             CCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCC-CCHHHHHHHHHc
Confidence            4679999999997742     378999999999999999999999976 344444455543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0577|consensus

Probab=99.03  E-value=1e-10  Score=93.76  Aligned_cols=53  Identities=28%  Similarity=0.515  Sum_probs=44.4

Q ss_pred             eeeccCCCccccccccc----ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHH
Q psy360            9 NIRTQRTPEFMAPEMYE----EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIY   61 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~----~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~   61 (199)
                      ..+++|||.|||||++.    |+|+-|+||||+||.+.||.-.++|++..+....++
T Consensus       179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALY  235 (948)
T KOG0577|consen  179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY  235 (948)
T ss_pred             hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHH
Confidence            34689999999999662    789999999999999999999999998755444443

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.03  E-value=4.7e-10  Score=80.09  Aligned_cols=80  Identities=23%  Similarity=0.136  Sum_probs=55.9

Q ss_pred             ceeecCccceeEEEEEECCCCcEEEEEEecccccCHHH------------------------HHHHHHHHHHHhcCCCCC
Q psy360          112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE------------------------RARFREEAEMLKGLQHPN  167 (199)
Q Consensus       112 ~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------~~~~~~E~~~l~~l~h~n  167 (199)
                      ...||+|+||.||+|.+. +|..||+|.+.........                        ......|+.++.++.|++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            467999999999999876 8999999998654221111                        122345999999998887


Q ss_pred             ccceeeeeeeeecCCceEEEEEeccCCCCCC
Q psy360          168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       168 iv~l~~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      +.....+..    .  ..+|||||++|++|.
T Consensus        81 v~~p~~~~~----~--~~~iVmE~i~g~~l~  105 (190)
T cd05147          81 IPCPEPILL----K--SHVLVMEFIGDDGWA  105 (190)
T ss_pred             CCCCcEEEe----c--CCEEEEEEeCCCCCc
Confidence            744332221    1  228999999988763

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG3653|consensus

Probab=99.03  E-value=1.9e-10  Score=89.61  Aligned_cols=86  Identities=29%  Similarity=0.351  Sum_probs=67.4

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC--CCCCccceeeeeeeeecCCce
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL--QHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+++...+|+|.||.||+|...+  +.||||.+.     ....+.|..|-+|.+..  +|+||++++++-.........
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~--~~VAVKifp-----~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e  282 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDN--RLVAVKIFP-----EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME  282 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccC--ceeEEEecC-----HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence            456788899999999999997654  789998874     44567799998887755  799999999876421112447


Q ss_pred             EEEEEeccCCCCCCC
Q psy360          185 IVLVTELMTSGTLKT  199 (199)
Q Consensus       185 ~~lv~E~~~~G~L~~  199 (199)
                      .+||+||-++|+|.+
T Consensus       283 ywLVt~fh~kGsL~d  297 (534)
T KOG3653|consen  283 YWLVTEFHPKGSLCD  297 (534)
T ss_pred             eeEEeeeccCCcHHH
Confidence            899999999999853

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.03  E-value=1.8e-09  Score=82.26  Aligned_cols=86  Identities=26%  Similarity=0.348  Sum_probs=69.6

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~  182 (199)
                      ...+.|++.+.||+|+||.||++.+..++..+|+|.+..... ......+..|+.++.++. |+||+++++++.    ..
T Consensus        12 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~----~~   86 (296)
T cd06618          12 ADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN-KEENKRILMDLDVVLKSHDCPYIVKCYGYFI----TD   86 (296)
T ss_pred             CCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC-hHHHHHHHHHHHHHHhccCCCchHhhheeee----cC
Confidence            344678889999999999999999998899999999864332 223455667777777775 999999999987    67


Q ss_pred             ceEEEEEeccCC
Q psy360          183 KYIVLVTELMTS  194 (199)
Q Consensus       183 ~~~~lv~E~~~~  194 (199)
                      ...|+||||+.+
T Consensus        87 ~~~~~v~e~~~~   98 (296)
T cd06618          87 SDVFICMELMST   98 (296)
T ss_pred             CeEEEEeeccCc
Confidence            889999999864

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.02  E-value=1.2e-09  Score=84.57  Aligned_cols=89  Identities=24%  Similarity=0.273  Sum_probs=67.3

Q ss_pred             ccccceeecCccceeEEEEEECCC--CcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCce
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQT--GVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~--~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~  184 (199)
                      +|++.+.||+|+||.||++.+..+  +..+|+|.+..........+.+.+|+.+++++ +|+||+++++++.........
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            367788999999999999998877  88999998864322233356688899999999 599999999865421113356


Q ss_pred             EEEEEeccCCCCC
Q psy360          185 IVLVTELMTSGTL  197 (199)
Q Consensus       185 ~~lv~E~~~~G~L  197 (199)
                      .|++|||+. ++|
T Consensus        81 ~~~~~e~~~-~~L   92 (332)
T cd07857          81 LYLYEELME-ADL   92 (332)
T ss_pred             EEEEEeccc-CCH
Confidence            789999986 344

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.02  E-value=3.5e-10  Score=87.49  Aligned_cols=44  Identities=36%  Similarity=0.589  Sum_probs=39.4

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|+.||..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~  198 (327)
T cd05617         154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI  198 (327)
T ss_pred             ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence            3568999999999876 5699999999999999999999999963

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.02  E-value=2.3e-10  Score=88.65  Aligned_cols=54  Identities=28%  Similarity=0.637  Sum_probs=42.7

Q ss_pred             eccCCCccccccccc------ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE------EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~------~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ..+||+.|+|||++.      +.++.++|+|||||++|+|++|+.||... +..+.+..+.
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~-~~~~~~~~i~  221 (331)
T cd05624         162 VAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYGKIM  221 (331)
T ss_pred             cccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC-CHHHHHHHHH
Confidence            357999999999775      35788999999999999999999999763 3334444443

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PTZ00284 protein kinase; Provisional

Probab=99.02  E-value=1.2e-09  Score=88.56  Aligned_cols=86  Identities=13%  Similarity=0.161  Sum_probs=64.0

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCC------CCccceeeeeeee
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQH------PNIVSFYGYWEVT  178 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~~~~  178 (199)
                      ..++|++.+.||+|+||+||++.+..++..||+|.+...   ......+..|+.++..+.|      .+++++++++.. 
T Consensus       127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~-  202 (467)
T PTZ00284        127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV---PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN-  202 (467)
T ss_pred             CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc---hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc-
Confidence            456799999999999999999999999999999998532   1222335556666666544      458888888762 


Q ss_pred             ecCCceEEEEEeccCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTL  197 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L  197 (199)
                        .....+||||++ +|+|
T Consensus       203 --~~~~~~iv~~~~-g~~l  218 (467)
T PTZ00284        203 --ETGHMCIVMPKY-GPCL  218 (467)
T ss_pred             --CCceEEEEEecc-CCCH
Confidence              456789999988 4444

>KOG0666|consensus

Probab=99.02  E-value=5.5e-11  Score=88.43  Aligned_cols=88  Identities=20%  Similarity=0.257  Sum_probs=67.8

Q ss_pred             hcccccccceeecCccceeEEEEEECCC----CcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQT----GVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~----~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      .....|+....||+|.||.||++....+    ...+|+|.+....-...-.....+|+.+++.++|+||+.|...+..  
T Consensus        21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~--   98 (438)
T KOG0666|consen   21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLS--   98 (438)
T ss_pred             HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhc--
Confidence            4556788999999999999999954433    2368888775442211223458899999999999999999988761  


Q ss_pred             cCCceEEEEEeccCC
Q psy360          180 TKRKYIVLVTELMTS  194 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~  194 (199)
                       .+..++|++||.+.
T Consensus        99 -~d~~v~l~fdYAEh  112 (438)
T KOG0666|consen   99 -HDKKVWLLFDYAEH  112 (438)
T ss_pred             -cCceEEEEehhhhh
Confidence             37889999999986

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.01  E-value=1.2e-09  Score=89.25  Aligned_cols=86  Identities=14%  Similarity=0.176  Sum_probs=60.9

Q ss_pred             cccccccceeecCccceeEEEEEECCCCc-EEEEEEe--------------ccc-ccCHHHHHHHHHHHHHHhcCCCCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGV-AVAWCEL--------------QEK-KLNKAERARFREEAEMLKGLQHPNI  168 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~-~~a~k~~--------------~~~-~~~~~~~~~~~~E~~~l~~l~h~ni  168 (199)
                      ..+.|++++.||+|+||+||+|..+.... ..+.|.+              ... .........+.+|+.++++++|+||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence            34679999999999999999986543221 1111111              000 0112234568899999999999999


Q ss_pred             cceeeeeeeeecCCceEEEEEeccCC
Q psy360          169 VSFYGYWEVTLTKRKYIVLVTELMTS  194 (199)
Q Consensus       169 v~l~~~~~~~~~~~~~~~lv~E~~~~  194 (199)
                      +++++++.    ..+..|+|+|++.+
T Consensus       226 v~l~~~~~----~~~~~~lv~e~~~~  247 (501)
T PHA03210        226 LKIEEILR----SEANTYMITQKYDF  247 (501)
T ss_pred             CcEeEEEE----ECCeeEEEEecccc
Confidence            99999987    67788999998754

>PRK10345 hypothetical protein; Provisional

Probab=99.01  E-value=1.1e-09  Score=79.25  Aligned_cols=83  Identities=17%  Similarity=0.265  Sum_probs=59.6

Q ss_pred             ccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-----CCCCccceeeeeeeeecCCce
Q psy360          110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-----QHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       110 ~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~~~~~~  184 (199)
                      .-...||+|+||.||.  ++.++.. ++|.+....  ....+.+.+|+.+++.+     .||||+++++++.+... ...
T Consensus         5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~--~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g-~g~   78 (210)
T PRK10345          5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG--DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCG-TGY   78 (210)
T ss_pred             CCcceecCCCceEEEE--CCCCcCe-EEEEEeccc--cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCC-CeE
Confidence            3457899999999996  5655554 577775432  12345689999999999     57999999999874211 134


Q ss_pred             -EEEEEec--cCCCCCC
Q psy360          185 -IVLVTEL--MTSGTLK  198 (199)
Q Consensus       185 -~~lv~E~--~~~G~L~  198 (199)
                       ..+||||  +.+|+|.
T Consensus        79 v~~~I~e~~G~~~~tL~   95 (210)
T PRK10345         79 VYDVIADFDGKPSITLT   95 (210)
T ss_pred             EEEEEecCCCCcchhHH
Confidence             3478999  5678874

>KOG0198|consensus

Probab=99.01  E-value=6.9e-11  Score=89.69  Aligned_cols=45  Identities=31%  Similarity=0.604  Sum_probs=38.9

Q ss_pred             eeeccCCCccccccccc-cc-CCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE-EH-YDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~-~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      .....||+.|||||++. +. ...++|+|||||+++||+||+.||..
T Consensus       178 ~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~  224 (313)
T KOG0198|consen  178 ELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE  224 (313)
T ss_pred             cccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence            44689999999999887 43 33499999999999999999999976

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.00  E-value=2.9e-10  Score=91.42  Aligned_cols=48  Identities=17%  Similarity=0.250  Sum_probs=40.6

Q ss_pred             eeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCCh
Q psy360           10 IRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIGP   57 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~   57 (199)
                      ....||+.|+|||++.  ..++.++|+|||||++++|++|..||......
T Consensus       228 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~  277 (440)
T PTZ00036        228 VSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV  277 (440)
T ss_pred             ccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence            3467899999999765  35999999999999999999999999764443

>KOG1006|consensus

Probab=99.00  E-value=1.3e-10  Score=84.73  Aligned_cols=86  Identities=28%  Similarity=0.335  Sum_probs=72.1

Q ss_pred             hhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecC
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  181 (199)
                      +...++++.+..||.|+||.|++-.++.+++..|||.+.... ..+++++++.|.....+- +.||||+++|.+.    .
T Consensus        60 ~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n-~~keq~rll~e~d~~mks~~cp~IVkfyGa~F----~  134 (361)
T KOG1006|consen   60 TFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN-IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALF----S  134 (361)
T ss_pred             ccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeecc-chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhh----c
Confidence            344567888899999999999999999999999999997554 356778888888776666 6899999999765    6


Q ss_pred             CceEEEEEeccC
Q psy360          182 RKYIVLVTELMT  193 (199)
Q Consensus       182 ~~~~~lv~E~~~  193 (199)
                      .+..||.||+|.
T Consensus       135 EGdcWiCMELMd  146 (361)
T KOG1006|consen  135 EGDCWICMELMD  146 (361)
T ss_pred             CCceeeeHHHHh
Confidence            788899999986

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.00  E-value=3.7e-10  Score=92.01  Aligned_cols=44  Identities=25%  Similarity=0.556  Sum_probs=39.7

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ...+||+.|+|||++. +.++.++|+|||||++|+|++|+.||..
T Consensus       203 ~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~  247 (496)
T PTZ00283        203 RTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDG  247 (496)
T ss_pred             ccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            3568999999999887 5699999999999999999999999975

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.00  E-value=2.6e-10  Score=99.92  Aligned_cols=43  Identities=28%  Similarity=0.500  Sum_probs=38.3

Q ss_pred             ccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           12 TQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        12 ~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ..||+.|||||++. +.++.++|||||||++|||++|+.||+..
T Consensus       838 ~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~  881 (968)
T PLN00113        838 CFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAE  881 (968)
T ss_pred             ccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcc
Confidence            36789999999876 57999999999999999999999999654

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.00  E-value=4.8e-10  Score=85.00  Aligned_cols=55  Identities=20%  Similarity=0.251  Sum_probs=43.4

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ....||+.|+|||.+. ..++.++|+|||||++++|++|+.||....+. ..+..++
T Consensus       167 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~-~~~~~i~  222 (290)
T cd07862         167 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKIL  222 (290)
T ss_pred             ccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH-HHHHHHH
Confidence            3557899999999775 67899999999999999999999999764333 3333443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.00  E-value=2.1e-10  Score=88.77  Aligned_cols=44  Identities=36%  Similarity=0.589  Sum_probs=39.4

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++|+|++|+.||..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~  198 (329)
T cd05588         154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  198 (329)
T ss_pred             ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence            4568999999999876 5689999999999999999999999963

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG4717|consensus

Probab=99.00  E-value=3e-10  Score=89.82  Aligned_cols=61  Identities=18%  Similarity=0.404  Sum_probs=47.3

Q ss_pred             eeeccCCCccccccccc-ccCC-CcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhccc
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYD-ESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT   70 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~-~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~~   70 (199)
                      .++.||++.|-|||++. ..|+ .++||||+|||||-|++|+.||....+ .+.+-.|..+.+.
T Consensus       175 L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND-SETLTmImDCKYt  237 (864)
T KOG4717|consen  175 LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND-SETLTMIMDCKYT  237 (864)
T ss_pred             hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc-hhhhhhhhccccc
Confidence            56789999999999776 4565 699999999999999999999987544 3444445444443

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.99  E-value=3.4e-10  Score=95.30  Aligned_cols=55  Identities=29%  Similarity=0.660  Sum_probs=44.1

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      .++||+.|||||++. ..++.++|+|||||+||||++|+.||.. ......+..++.
T Consensus       539 ~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~-~~~~~~~~~il~  594 (669)
T cd05610         539 RILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFND-ETPQQVFQNILN  594 (669)
T ss_pred             ceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHh
Confidence            468999999999776 5699999999999999999999999975 344444444443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.99  E-value=3.7e-10  Score=85.49  Aligned_cols=45  Identities=20%  Similarity=0.290  Sum_probs=39.5

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ...||+.|+|||++. ..++.++|+|||||++++|++|+.||....
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~  205 (287)
T cd07848         160 EYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGES  205 (287)
T ss_pred             ccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCC
Confidence            457899999999876 568999999999999999999999997643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.99  E-value=4.3e-10  Score=87.09  Aligned_cols=53  Identities=28%  Similarity=0.661  Sum_probs=41.6

Q ss_pred             ccCCCccccccccc------ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           12 TQRTPEFMAPEMYE------EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        12 ~~gt~~y~ape~~~------~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      .+||+.|||||++.      +.++.++|+|||||++++|++|+.||... +..+.+..+.
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~-~~~~~~~~i~  221 (331)
T cd05597         163 AVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYGKIM  221 (331)
T ss_pred             eeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC-CHHHHHHHHH
Confidence            57999999999874      34788999999999999999999999753 3333434433

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=98.98  E-value=2.4e-10  Score=89.02  Aligned_cols=55  Identities=25%  Similarity=0.503  Sum_probs=44.2

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...||+.|+|||++. ..++.++|+|||||++++|++|+.||.... .......+..
T Consensus       189 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-~~~~~~~i~~  244 (350)
T cd05573         189 STVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT-LQETYNKIIN  244 (350)
T ss_pred             ccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC-HHHHHHHHhc
Confidence            457999999999876 569999999999999999999999997643 3334444443

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.98  E-value=4.7e-10  Score=85.73  Aligned_cols=54  Identities=13%  Similarity=0.247  Sum_probs=43.3

Q ss_pred             eccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV   64 (199)
Q Consensus        11 ~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i   64 (199)
                      ...||+.|+|||++.  ..++.++|+|||||++++|++|..||....+....+..+
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~  217 (303)
T cd07869         162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERI  217 (303)
T ss_pred             CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHH
Confidence            457899999999775  358899999999999999999999998765554444433

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.98  E-value=5e-10  Score=87.84  Aligned_cols=46  Identities=26%  Similarity=0.273  Sum_probs=40.1

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ....||+.|+|||++. ..++.++|+|||||++++|++|+.||....
T Consensus       183 ~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  229 (364)
T cd07875         183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD  229 (364)
T ss_pred             cCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Confidence            3457899999999876 568999999999999999999999997643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.98  E-value=1.2e-09  Score=88.69  Aligned_cols=94  Identities=18%  Similarity=0.257  Sum_probs=63.6

Q ss_pred             cccccccceeecCccceeEEEEEEC----------------CCCcEEEEEEecccccCH------------HHHHHHHHH
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDT----------------QTGVAVAWCELQEKKLNK------------AERARFREE  156 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~----------------~~~~~~a~k~~~~~~~~~------------~~~~~~~~E  156 (199)
                      ..++|++.++||+|+||.||+|...                ..+..||+|.+.......            ...+....|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            4668999999999999999999642                234679999985432110            011234457


Q ss_pred             HHHHhcCCCCCc-----cceeeeeeeee----cCCceEEEEEeccCCCCCC
Q psy360          157 AEMLKGLQHPNI-----VSFYGYWEVTL----TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       157 ~~~l~~l~h~ni-----v~l~~~~~~~~----~~~~~~~lv~E~~~~G~L~  198 (199)
                      +..+.+++|.|+     ++++++|....    ......+|||||+++|+|.
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~  273 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLG  273 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHH
Confidence            777777876654     56777765211    1235689999999999884

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=98.97  E-value=1.5e-10  Score=89.37  Aligned_cols=44  Identities=34%  Similarity=0.665  Sum_probs=39.5

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ..+||+.|+|||++. +.++.++|+|||||++++|++|+.||...
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~  199 (325)
T cd05594         155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ  199 (325)
T ss_pred             cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCC
Confidence            467999999999876 56999999999999999999999999763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=98.97  E-value=5.5e-10  Score=90.69  Aligned_cols=44  Identities=27%  Similarity=0.610  Sum_probs=39.6

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|+.||..
T Consensus       229 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~  273 (478)
T PTZ00267        229 SSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKG  273 (478)
T ss_pred             cccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence            3567999999999876 5699999999999999999999999975

>KOG1006|consensus

Probab=98.97  E-value=5.4e-11  Score=86.68  Aligned_cols=51  Identities=27%  Similarity=0.552  Sum_probs=41.9

Q ss_pred             ceeeeeccCCCccccccccc--cc-CCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360            6 SYVNIRTQRTPEFMAPEMYE--EH-YDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus         6 ~~~~~~~~gt~~y~ape~~~--~~-~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      |..-+.-.|+.+|||||-+.  +. |+.+||+||+|+.|+|+.||..|+..-.+
T Consensus       221 SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s  274 (361)
T KOG1006|consen  221 SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS  274 (361)
T ss_pred             HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH
Confidence            34455668999999999664  33 99999999999999999999999965333

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=98.97  E-value=2.5e-10  Score=88.38  Aligned_cols=43  Identities=37%  Similarity=0.624  Sum_probs=38.8

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYM   52 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~   52 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|+.||.
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~  197 (329)
T cd05618         154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD  197 (329)
T ss_pred             ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence            3568999999999876 568999999999999999999999995

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.96  E-value=2.7e-10  Score=88.19  Aligned_cols=44  Identities=27%  Similarity=0.452  Sum_probs=38.8

Q ss_pred             eeccCCCcccccccccc--cCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYEE--HYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~--~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ...+||+.|||||++.+  .++.++|+|||||++++|++|..||..
T Consensus       164 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~  209 (332)
T cd05614         164 YSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTL  209 (332)
T ss_pred             ccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCC
Confidence            35689999999998864  478899999999999999999999964

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0589|consensus

Probab=98.96  E-value=5.1e-10  Score=87.61  Aligned_cols=59  Identities=24%  Similarity=0.465  Sum_probs=47.6

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      ...+++||+.||.||++. ..|+.|+|+||+||++|||++-+++|.. .+...+..++...
T Consensus       162 ~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a-~~m~~Li~ki~~~  221 (426)
T KOG0589|consen  162 LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKA-SNMSELILKINRG  221 (426)
T ss_pred             hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCc-cchHHHHHHHhhc
Confidence            455789999999999988 4699999999999999999999999976 4444444444443

>PHA02882 putative serine/threonine kinase; Provisional

Probab=98.96  E-value=5.6e-10  Score=85.03  Aligned_cols=43  Identities=16%  Similarity=0.288  Sum_probs=39.2

Q ss_pred             ccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           12 TQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        12 ~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ..||+.|+|||+.. ..++.++|+|||||++++|++|+.||...
T Consensus       193 ~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~  236 (294)
T PHA02882        193 HRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGF  236 (294)
T ss_pred             cCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence            47999999999877 56999999999999999999999999765

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.95  E-value=5.9e-10  Score=84.26  Aligned_cols=44  Identities=41%  Similarity=0.677  Sum_probs=39.3

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...||+.|+|||++. +.++.++|+|||||++|+|++|+.||...
T Consensus       156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~  200 (280)
T cd05608         156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRAR  200 (280)
T ss_pred             ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence            457899999999876 67899999999999999999999999753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.95  E-value=5.2e-09  Score=74.81  Aligned_cols=79  Identities=38%  Similarity=0.589  Sum_probs=67.2

Q ss_pred             ecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEeccCC
Q psy360          115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTS  194 (199)
Q Consensus       115 lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~~~~  194 (199)
                      ||+|++|.||++....++..+++|......... ..+.+.+|+..++.+.|++++++++++.    .....+++|||+.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~----~~~~~~~~~e~~~~   75 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFE----DENHLYLVMEYCEG   75 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeee----cCCeEEEEEecCCC
Confidence            689999999999998889999999986543221 3467999999999999999999999887    56889999999998


Q ss_pred             CCCC
Q psy360          195 GTLK  198 (199)
Q Consensus       195 G~L~  198 (199)
                      ++|.
T Consensus        76 ~~l~   79 (215)
T cd00180          76 GSLK   79 (215)
T ss_pred             CcHH
Confidence            8874

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.95  E-value=1e-09  Score=85.90  Aligned_cols=46  Identities=24%  Similarity=0.283  Sum_probs=40.3

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ....||+.|+|||++. ..++.++|+|||||++|+|++|+.||....
T Consensus       180 ~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~  226 (359)
T cd07876         180 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD  226 (359)
T ss_pred             CCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence            3467899999999876 569999999999999999999999997643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.95  E-value=4.7e-10  Score=86.21  Aligned_cols=44  Identities=30%  Similarity=0.398  Sum_probs=38.5

Q ss_pred             eccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...||+.|+|||++.  ..++.++|+||+||++++|++|+.||...
T Consensus       174 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         174 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             CccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence            467899999999775  35899999999999999999999999643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG4250|consensus

Probab=98.94  E-value=6e-10  Score=90.65  Aligned_cols=55  Identities=31%  Similarity=0.664  Sum_probs=48.2

Q ss_pred             cceeeeeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhH
Q psy360            5 KSYVNIRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQ   59 (199)
Q Consensus         5 ~~~~~~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~   59 (199)
                      ..+..+.++||+.|.+||+..  +.|+..+|.|||||++|+.+||..||.+..+++.
T Consensus       176 d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~  232 (732)
T KOG4250|consen  176 DNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKN  232 (732)
T ss_pred             CCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccc
Confidence            344677899999999999775  6799999999999999999999999998777754

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=98.94  E-value=4.8e-10  Score=86.83  Aligned_cols=44  Identities=20%  Similarity=0.332  Sum_probs=38.8

Q ss_pred             eccCCCccccccccc---ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE---EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~---~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ..+||+.|+|||++.   ..++.++|+|||||++++|++|+.||...
T Consensus       165 ~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~  211 (338)
T cd07859         165 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK  211 (338)
T ss_pred             CCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence            457999999999875   46899999999999999999999999764

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0596|consensus

Probab=98.94  E-value=9.4e-10  Score=87.43  Aligned_cols=82  Identities=21%  Similarity=0.338  Sum_probs=68.0

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~  185 (199)
                      +.|++++.||+||-++||++...+ ...+|+|++..........+.+.+|+.+|.+|+ |.+||+|++|-.    .++++
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv----~d~~l  435 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV----TDGYL  435 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec----cCceE
Confidence            347889999999999999998544 345666666555666778889999999999996 999999999987    78999


Q ss_pred             EEEEeccC
Q psy360          186 VLVTELMT  193 (199)
Q Consensus       186 ~lv~E~~~  193 (199)
                      ||||||=+
T Consensus       436 YmvmE~Gd  443 (677)
T KOG0596|consen  436 YMVMECGD  443 (677)
T ss_pred             EEEeeccc
Confidence            99999743

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=98.93  E-value=5.9e-10  Score=86.34  Aligned_cols=44  Identities=25%  Similarity=0.570  Sum_probs=39.2

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...||+.|+|||++. ..++.++|+|||||++|+|++|+.||...
T Consensus       161 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~  205 (331)
T cd06649         161 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPP  205 (331)
T ss_pred             cCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence            457999999999887 56999999999999999999999999653

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0200|consensus

Probab=98.93  E-value=1.6e-09  Score=90.20  Aligned_cols=57  Identities=23%  Similarity=0.370  Sum_probs=43.1

Q ss_pred             eeccCCCc--cccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHHhh
Q psy360           10 IRTQRTPE--FMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus        10 ~~~~gt~~--y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      ....||++  |||||.+. ..++.|+|||||||+||||++ |..|+.+......+++ .+..
T Consensus       477 ~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~-~l~~  537 (609)
T KOG0200|consen  477 KSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLE-FLKE  537 (609)
T ss_pred             cCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHH-HHhc
Confidence            34455454  99999887 579999999999999999988 8889977444555544 4443

>KOG0695|consensus

Probab=98.92  E-value=6e-10  Score=83.95  Aligned_cols=92  Identities=17%  Similarity=0.234  Sum_probs=76.5

Q ss_pred             hhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcC-CCCCccceeeeeeeee
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGL-QHPNIVSFYGYWEVTL  179 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  179 (199)
                      +...-+.|.++++||+|+|++|..++...+.+.+|+|.+++.-.+++ ..+-...|-.+..+- +||.+|.|+.+|.   
T Consensus       245 ~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfq---  321 (593)
T KOG0695|consen  245 QGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQ---  321 (593)
T ss_pred             cccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhc---
Confidence            34445678999999999999999999999999999999976654443 345556677777666 6999999999998   


Q ss_pred             cCCceEEEEEeccCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTL  197 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L  197 (199)
                       ...++++|.||++||+|
T Consensus       322 -tesrlffvieyv~ggdl  338 (593)
T KOG0695|consen  322 -TESRLFFVIEYVNGGDL  338 (593)
T ss_pred             -ccceEEEEEEEecCcce
Confidence             78899999999999998

>KOG4279|consensus

Probab=98.92  E-value=1.3e-10  Score=94.86  Aligned_cols=48  Identities=33%  Similarity=0.632  Sum_probs=42.0

Q ss_pred             eeccCCCccccccccc-c--cCCCcCcchhHHHHHHHHHhCCCCCCCCCCh
Q psy360           10 IRTQRTPEFMAPEMYE-E--HYDESVDVYAFGMCMLEMSTSEYPYMECIGP   57 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~--~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~   57 (199)
                      .++-||+-|||||++. |  .|+.+.|+|||||.+.||.||++||..-.++
T Consensus       734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp  784 (1226)
T KOG4279|consen  734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP  784 (1226)
T ss_pred             cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh
Confidence            3678999999999985 3  4999999999999999999999999865544

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.92  E-value=2.6e-10  Score=88.19  Aligned_cols=54  Identities=26%  Similarity=0.540  Sum_probs=43.2

Q ss_pred             eccCCCcccccccccc--cCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYEE--HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~~--~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ..+||+.|+|||.+.+  .++.++|+|||||++|+|++|+.||... +..+.++.+.
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~-~~~~~~~~i~  210 (330)
T cd05586         155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE-DTQQMYRNIA  210 (330)
T ss_pred             CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC-CHHHHHHHHH
Confidence            4689999999998753  4899999999999999999999999763 3444444444

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0576|consensus

Probab=98.92  E-value=2.8e-10  Score=92.10  Aligned_cols=144  Identities=19%  Similarity=0.337  Sum_probs=92.0

Q ss_pred             eccCCCcccccccc----cccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhccccCCCccccCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMY----EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAGPKVVFQPISGVKP   86 (199)
Q Consensus        11 ~~~gt~~y~ape~~----~~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   86 (199)
                      ...||+.|||||+.    ++.|.+++|+|+.|+...|+---+.|..+-. +.+.+.-..++.         +++....  
T Consensus       171 sfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh-pmr~l~LmTkS~---------~qpp~lk--  238 (829)
T KOG0576|consen  171 SFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH-PMRALFLMTKSG---------FQPPTLK--  238 (829)
T ss_pred             cccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc-hHHHHHHhhccC---------CCCCccc--
Confidence            56899999999965    2669999999999999988877666665522 222222121111         1111111  


Q ss_pred             CccccccCccchhhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCC
Q psy360           87 QSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHP  166 (199)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~  166 (199)
                                       ....-+.....++++++++++|.+...+.... .+.+...       ....-++++|.+++||
T Consensus       239 -----------------Dk~kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-------l~~rl~~eLLdK~n~P  293 (829)
T KOG0576|consen  239 -----------------DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-------LSRRLAIELLDKVNNP  293 (829)
T ss_pred             -----------------CCccchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-------hhhHHHHHHHHHccCC
Confidence                             11112233455678899999988754443333 3333211       3355678899999999


Q ss_pred             C-ccceeeeeeeeecCCceEEEEEeccCCC
Q psy360          167 N-IVSFYGYWEVTLTKRKYIVLVTELMTSG  195 (199)
Q Consensus       167 n-iv~l~~~~~~~~~~~~~~~lv~E~~~~G  195 (199)
                      | .+..++-+.    .+++.+++|+++.+|
T Consensus       294 ~~~v~~~~d~~----~E~~~~i~~~i~s~~  319 (829)
T KOG0576|consen  294 NPVVRYLEDYD----GEDYLWIPMRICSTG  319 (829)
T ss_pred             CCcccccccCC----cccccchhhhhhcCC
Confidence            9 566665444    678899999999887

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.92  E-value=9.7e-10  Score=94.48  Aligned_cols=51  Identities=24%  Similarity=0.513  Sum_probs=42.1

Q ss_pred             eccCCCccccccccc---ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHH
Q psy360           11 RTQRTPEFMAPEMYE---EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIY   61 (199)
Q Consensus        11 ~~~gt~~y~ape~~~---~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~   61 (199)
                      ..+||+.|+|||++.   ..++.++|||||||+||+|++|..||..........
T Consensus       200 s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli  253 (1021)
T PTZ00266        200 SCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLI  253 (1021)
T ss_pred             ccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHH
Confidence            457999999999774   348899999999999999999999997655544443

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.92  E-value=1.1e-09  Score=85.66  Aligned_cols=45  Identities=27%  Similarity=0.312  Sum_probs=39.7

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ....||+.|+|||++. ..++.++|+|||||++++|++|+.||...
T Consensus       176 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  221 (355)
T cd07874         176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR  221 (355)
T ss_pred             CCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            3457899999999876 46899999999999999999999999764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.91  E-value=1.4e-09  Score=82.33  Aligned_cols=44  Identities=23%  Similarity=0.283  Sum_probs=38.6

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...||+.|+|||++. ..++.++|+|||||++++|++|+.||...
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~  210 (288)
T cd07863         166 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN  210 (288)
T ss_pred             CccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCC
Confidence            457899999999775 56999999999999999999999888653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.91  E-value=4.2e-09  Score=76.77  Aligned_cols=94  Identities=6%  Similarity=-0.059  Sum_probs=70.0

Q ss_pred             hhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHH------HHHHHHHHhcCCCCCccceeeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERAR------FREEAEMLKGLQHPNIVSFYGYW  175 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~------~~~E~~~l~~l~h~niv~l~~~~  175 (199)
                      ......|+..+.+|.|+||.||+...  ++..+++|.+.......+ ....      +.+|+..+.++.|++|..+..++
T Consensus        27 ~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~  104 (232)
T PRK10359         27 DFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY  104 (232)
T ss_pred             HHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence            34567899999999999999999654  355799999865433222 2222      57899999999999999998876


Q ss_pred             eeeec----CCceEEEEEeccCCCCCC
Q psy360          176 EVTLT----KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       176 ~~~~~----~~~~~~lv~E~~~~G~L~  198 (199)
                      .....    .....+|||||++|.+|.
T Consensus       105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~  131 (232)
T PRK10359        105 LLAERKTLRYAHTYIMLIEYIEGVELN  131 (232)
T ss_pred             eecccccccccCCeEEEEEEECCccHH
Confidence            52110    124689999999998874

>KOG0193|consensus

Probab=98.91  E-value=4e-10  Score=90.25  Aligned_cols=40  Identities=38%  Similarity=0.653  Sum_probs=36.5

Q ss_pred             cCCCccccccccc----ccCCCcCcchhHHHHHHHHHhCCCCCC
Q psy360           13 QRTPEFMAPEMYE----EHYDESVDVYAFGMCMLEMSTSEYPYM   52 (199)
Q Consensus        13 ~gt~~y~ape~~~----~~~~~~~d~ws~gv~l~~l~~g~~p~~   52 (199)
                      .|...|||||+++    ..|+..+||||||+|+|||++|..||.
T Consensus       551 ~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys  594 (678)
T KOG0193|consen  551 HGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS  594 (678)
T ss_pred             ccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC
Confidence            5788999999886    249999999999999999999999997

>KOG0599|consensus

Probab=98.91  E-value=5.2e-10  Score=82.04  Aligned_cols=90  Identities=26%  Similarity=0.362  Sum_probs=75.2

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc------CHHHHHHHHHHHHHHhcCC-CCCccceeeeeeee
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL------NKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVT  178 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~  178 (199)
                      -+.|...+.||+|..+.|-+|.+..++..+|+|.+.....      .....+...+|+.||+++. ||+|+.+.++|.  
T Consensus        16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye--   93 (411)
T KOG0599|consen   16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE--   93 (411)
T ss_pred             HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc--
Confidence            3456667889999999999999999999999999853221      1224567788999999995 999999999998  


Q ss_pred             ecCCceEEEEEeccCCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLKT  199 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~~  199 (199)
                        .+.+.++|+|.|+.|.|+|
T Consensus        94 --s~sF~FlVFdl~prGELFD  112 (411)
T KOG0599|consen   94 --SDAFVFLVFDLMPRGELFD  112 (411)
T ss_pred             --CcchhhhhhhhcccchHHH
Confidence              7889999999999999975

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.91  E-value=7.5e-10  Score=87.75  Aligned_cols=45  Identities=22%  Similarity=0.347  Sum_probs=40.2

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ...||+.|+|||++. ..++.++|+|||||++|+|++|+.||....
T Consensus       246 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~  291 (392)
T PHA03207        246 GWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ  291 (392)
T ss_pred             ccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence            457999999999887 569999999999999999999999997643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	199
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		7e-29
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		3e-05
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		3e-05
3kk9_A	282	Camkii Substrate Complex B Length = 282		4e-05
3kk8_A	284	Camkii Substrate Complex A Length = 284		4e-05
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		4e-05
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		5e-05
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		6e-05
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		1e-04
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		1e-04
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		1e-04
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		1e-04
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		1e-04
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		1e-04
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		1e-04
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		1e-04
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		1e-04
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		1e-04
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		1e-04
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		1e-04
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		1e-04
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		1e-04
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		1e-04
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		1e-04
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		1e-04
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		1e-04
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		1e-04
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		1e-04
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		1e-04
4ae6_A	343	Structure And Function Of The Human Sperm-specific		1e-04
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		1e-04
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		1e-04
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-04
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		1e-04
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		1e-04
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-04
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		1e-04
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-04
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-04
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-04
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		1e-04
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		1e-04
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		1e-04
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-04
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		1e-04
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		1e-04
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		1e-04
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		1e-04
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		1e-04
4ae9_A	343	Structure And Function Of The Human Sperm-specific		1e-04
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-04
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		1e-04
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-04
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		1e-04
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		1e-04
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		1e-04
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		1e-04
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		3e-04
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		3e-04
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-04
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		5e-04
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		5e-04
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		5e-04
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		6e-04

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score =  123 bits (308), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 60/92 (65%), Positives = 68/92 (73%)
Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
           +LKF+ EIGRGSFKTVY+GLDT+T V VAWCELQ++KL K            LKGLQHPN
Sbjct: 27  FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPN 86
Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY  WE T+  +K IVLVTEL TSGTLKT
Sbjct: 87  IVRFYDSWESTVKGKKCIVLVTELXTSGTLKT 118

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNI 168
           L  +E+IG GSF TV+R     + VAV    L E+  +            ++K L+HPNI
Sbjct: 39  LNIKEKIGAGSFGTVHRAEWHGSDVAVK--ILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           V F G     +T+   + +VTE ++ G+L
Sbjct: 97  VLFMG----AVTQPPNLSIVTEYLSRGSL 121

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNI 168
           L  +E+IG GSF TV+R     + VAV    L E+  +            ++K L+HPNI
Sbjct: 39  LNIKEKIGAGSFGTVHRAEWHGSDVAVK--ILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           V F G     +T+   + +VTE ++ G+L
Sbjct: 97  VLFMG----AVTQPPNLSIVTEYLSRGSL 121

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
           +EE+G+G+F  V R +   TG+  A   +  KKL+            + + LQHPNIV  
Sbjct: 10  KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 69
Query: 172 YGYWEVTLTKRKYIVLVTELMTSGTL 197
           +     ++ +  +  LV +L+T G L
Sbjct: 70  HD----SIQEESFHYLVFDLVTGGEL 91

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
           +EE+G+G+F  V R +   TG+  A   +  KKL+            + + LQHPNIV  
Sbjct: 11  KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 172 YGYWEVTLTKRKYIVLVTELMTSGTL 197
           +     ++ +  +  LV +L+T G L
Sbjct: 71  HD----SIQEESFHYLVFDLVTGGEL 92

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
           +EE+G+G+F  V R +   TG+  A   +  KKL+            + + LQHPNIV  
Sbjct: 11  KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 172 YGYWEVTLTKRKYIVLVTELMTSGTL 197
           +     ++ +  +  LV +L+T G L
Sbjct: 71  HD----SIQEESFHYLVFDLVTGGEL 92

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
           +EE+G+G+F  V R +   TG+  A   +  KKL+            + + LQHPNIV  
Sbjct: 34  KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 93
Query: 172 YGYWEVTLTKRKYIVLVTELMTSGTL 197
           +     ++ +  +  LV +L+T G L
Sbjct: 94  HD----SIQEESFHYLVFDLVTGGEL 115

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKXXXXXXXXXXXMLKGLQHPN 167
            + E++IGRG F  VYR      GV VA  ++Q   L +            +LK L HPN
Sbjct: 34  FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           ++ +Y     +  +   + +V EL  +G L
Sbjct: 94  VIKYYA----SFIEDNELNIVLELADAGDL 119

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 196 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 247

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 273

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 273

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 188 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 239

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 273

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 245

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADEPIQIYEKIVS 252

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 187 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 238

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 245

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN--KXXXXXXXXXXXMLKGLQHPNIVS 170
           E++G G++ TVY+GL+  TGV VA   L+E KL+  +           ++K L+H NIV 
Sbjct: 11  EKLGNGTYATVYKGLNKTTGVYVA---LKEVKLDSEEGTPSTAIREISLMKELKHENIVR 67
Query: 171 FYGYWEVTLTKRKYIVLVTELMTS 194
            Y   +V  T+ K + LV E M +
Sbjct: 68  LY---DVIHTENK-LTLVFEFMDN 87

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+   + Y+++VD +A G+ + +M+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE +APE+   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
           EE+G+G+F  V R +   TG   A   +  KKL+            + + L+HPNIV  +
Sbjct: 10  EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 173 GYWEVTLTKRKYIVLVTELMTSGTL 197
                ++++  +  LV +L+T G L
Sbjct: 70  D----SISEEGFHYLVFDLVTGGEL 90

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
           EE+G+G+F  V R +   TG   A   +  KKL+            + + L+HPNIV  +
Sbjct: 10  EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 173 GYWEVTLTKRKYIVLVTELMTSGTL 197
                ++++  +  LV +L+T G L
Sbjct: 70  D----SISEEGFHYLVFDLVTGGEL 90

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++AP +   + Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLK-GLQHPNIVSFYG 173
           +G+GSF  VYR     TG+ VA   + +K + K            +   L+HP+I+  Y 
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 174 YWEVTLTKRKYIVLVTELMTSGTLK 198
           Y+E +     Y+ LV E+  +G + 
Sbjct: 79  YFEDS----NYVYLVLEMCHNGEMN 99

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	199
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-41
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	9e-30
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-19
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-08
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-19
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-11
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-18
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	5e-13
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-18
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-10
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	4e-18
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	6e-18
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	5e-10
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-17
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-09
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-17
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-17
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	7e-05
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	6e-17
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-14
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	8e-17
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	8e-17
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-16
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-16
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-06
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-16
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-16
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-16
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	9e-09
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-16
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-16
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-16
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-16
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-06
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-16
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-07
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-16
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-06
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-16
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-16
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	6e-16
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	7e-16
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-09
4aoj_A	329	High affinity nerve growth factor receptor; transf	8e-16
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	8e-16
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	9e-16
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-15
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-15
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	7e-04
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-15
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-15
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-15
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-15
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-15
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-15
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-15
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	3e-15
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-15
3soc_A	322	Activin receptor type-2A; structural genomics cons	6e-06
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	4e-15
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	4e-15
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-15
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-15
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-15
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-15
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	5e-15
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-15
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	6e-15
3pls_A	298	Macrophage-stimulating protein receptor; protein k	6e-15
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	6e-15
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	7e-15
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	8e-15
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	9e-15
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-14
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-14
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-14
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-14
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-14
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-14
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-04
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-14
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-05
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-14
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-14
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-14
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-14
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-14
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-05
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-14
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-14
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-14
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-14
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	4e-14
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	4e-14
2a19_B	284	Interferon-induced, double-stranded RNA-activated	4e-14
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-05
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	4e-14
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	4e-14
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-08
3bhy_A	283	Death-associated protein kinase 3; death associate	5e-14
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	6e-14
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	7e-14
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	7e-14
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	7e-14
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	9e-14
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-13
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-13
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-13
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-13
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-13
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-13
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-13
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-13
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	9e-05
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-13
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-13
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-05
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	4e-13
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	4e-13
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-13
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	5e-13
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	6e-13
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	7e-04
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	6e-13
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	6e-13
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	6e-13
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	8e-13
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	9e-13
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-12
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-12
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-12
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-12
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-12
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-12
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-12
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-12
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-12
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-12
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	8e-05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-12
3uqc_A	286	Probable conserved transmembrane protein; structur	7e-12
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	7e-12
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-11
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-11
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-11
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-11
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-11
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-11
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	8e-06
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-11
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-11
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	4e-11
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	5e-11
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	6e-11
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	9e-11
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-10
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-04
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	3e-10
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-10
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	4e-10
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-10
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	6e-10
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	6e-10
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-05
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	8e-10
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	8e-10
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	9e-10
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	9e-10
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-09
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	5e-04
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	7e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-09
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-04
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-09
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	6e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-09
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-09
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-09
2dyl_A	318	Dual specificity mitogen-activated protein kinase	6e-05
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-09
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-09
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	8e-05
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-09
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-09
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-09
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-09
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-05
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	4e-09
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	4e-09
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	5e-09
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	5e-09
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	6e-09
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-04
3fme_A	290	Dual specificity mitogen-activated protein kinase;	7e-09
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-05
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	8e-09
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	8e-09
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	8e-09
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-08
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-08
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-08
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-08
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-08
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-08
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-08
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-08
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-08
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	3e-08
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	4e-08
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	5e-08
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	8e-08
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-07
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	3e-07
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-07
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	7e-07
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	1e-06
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-06
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-06
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-06
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-06
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-06
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-06
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	3e-06
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	4e-06
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	4e-06
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	4e-06
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	8e-06
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	9e-06
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-05
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-05
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-05
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-05
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-05
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-05
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-05
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-05
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-05
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	3e-05
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	3e-05
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	3e-05
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	4e-05
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	5e-05
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	5e-05
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	7e-05
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	8e-05
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-04
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-04
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-04
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	1e-04
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-04
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-04
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-04
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-04
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-04
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-04
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	3e-04
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-04
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-04
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	3e-04
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	4e-04

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  139 bits (353), Expect = 4e-41
 Identities = 74/115 (64%), Positives = 88/115 (76%)

Query: 85  KPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK 144
           + Q  + +E  E K     +   +LKF+ EIGRGSFKTVY+GLDT+T V VAWCELQ++K
Sbjct: 4   RNQQQDDIEELETKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK 63

Query: 145 LNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           L K+ER RF+EEAEMLKGLQHPNIV FY  WE T+  +K IVLVTELMTSGTLKT
Sbjct: 64  LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKT 118

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  110 bits (276), Expect = 9e-30
 Identities = 55/87 (63%), Positives = 60/87 (68%), Gaps = 16/87 (18%)

Query: 13  QRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSA 72
             TPEFMAPEMYEE YDESVDVYAFGMCMLEM+TSEYPY EC   AQIY++V        
Sbjct: 191 IGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV-------- 242

Query: 73  GPKVVFQPISGVKPQSFERVESPEVKE 99
                    SGVKP SF++V  PEVKE
Sbjct: 243 --------TSGVKPASFDKVAIPEVKE 261

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 82.8 bits (205), Expect = 2e-19
 Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 6/98 (6%)

Query: 100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEM 159
             R      L   E +G+G F    +    +TG  +   EL   + ++  +  F +E ++
Sbjct: 3   PHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKEL--IRFDEETQRTFLKEVKV 60

Query: 160 LKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           ++ L+HPN++ F G     L K K +  +TE +  GTL
Sbjct: 61  MRCLEHPNVLKFIG----VLYKDKRLNFITEYIKGGTL 94

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 51.6 bits (124), Expect = 3e-08
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPY 51
            P +MAPEM     YDE VDV++FG+ + E+       
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNAD 222

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 82.0 bits (203), Expect = 4e-19
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 18/118 (15%)

Query: 86  PQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVA-----WCEL 140
              F +   P + + E       +++E++IG+G F  V++G   +    VA       + 
Sbjct: 5   GSEFPKSRLPTLADNE-------IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDS 57

Query: 141 QEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           + +     +   F+ E  ++  L HPNIV  YG           +  V E +  G L 
Sbjct: 58  EGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM----HNPPRM--VMEFVPCGDLY 109

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 59.6 bits (145), Expect = 4e-11
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)

Query: 15  TPEFMAPEMY---EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
             ++MAPE     EE Y E  D Y+F M +  + T E P+ E     +I
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE-YSYGKI 236

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 80.4 bits (199), Expect = 1e-18
 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 6/90 (6%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNI 168
           L  +E+IG GSF TV+R     + VAV    L E+  +      F  E  ++K L+HPNI
Sbjct: 39  LNIKEKIGAGSFGTVHRAEWHGSDVAVK--ILMEQDFHAERVNEFLREVAIMKRLRHPNI 96

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           V F G      T+   + +VTE ++ G+L 
Sbjct: 97  VLFMGAV----TQPPNLSIVTEYLSRGSLY 122

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 65.4 bits (160), Expect = 5e-13
 Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 2/52 (3%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV 65
           TPE+MAPE+   E  +E  DVY+FG+ + E++T + P+   + PAQ+   V 
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN-LNPAQVVAAVG 252

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 78.8 bits (195), Expect = 3e-18
 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 4/89 (4%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNI 168
           L  EE IG G F  VYR       VAV        +         R+EA++   L+HPNI
Sbjct: 9   LTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           ++  G       K   + LV E    G L
Sbjct: 69  IALRGVC----LKEPNLCLVMEFARGGPL 93

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 58.4 bits (142), Expect = 1e-10
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV 65
              +MAPE+     + +  DV+++G+ + E+ T E P+   I    +   V 
Sbjct: 177 AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG-IDGLAVAYGVA 227

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 80.1 bits (198), Expect = 4e-18
 Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 4/118 (3%)

Query: 80  PISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCE 139
           P         +     E               +EE+G+G+F  V R +   TG+  A   
Sbjct: 2   PHMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI 61

Query: 140 LQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           +  KKL+  +  +   EA + + LQHPNIV  +   +    +  +  LV +L+T G L
Sbjct: 62  INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ----EESFHYLVFDLVTGGEL 115

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 78.4 bits (194), Expect = 6e-18
 Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 4/90 (4%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNI 168
           L F  ++       +++G      + V    L+ +  +  +   F EE   L+   HPN+
Sbjct: 12  LNFLTKLNENHSGELWKGRWQGNDIVVK--VLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           +   G          +  L+T  M  G+L 
Sbjct: 70  LPVLGA--CQSPPAPHPTLITHWMPYGSLY 97

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 56.5 bits (137), Expect = 5e-10
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 15  TPEFMAPEMYE----EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV 65
            P ++APE  +    +    S D+++F + + E+ T E P+ + +   +I  KV 
Sbjct: 171 APAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD-LSNMEIGMKVA 224

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 77.4 bits (191), Expect = 2e-17
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 7/91 (7%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNI 168
           L+  E IG+G F  VY G      VA+    +  ++ N+ +   F+ E    +  +H N+
Sbjct: 35  LEIGELIGKGRFGQVYHGRWHGE-VAIR--LIDIERDNEDQLKAFKREVMAYRQTRHENV 91

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           V F G          ++ ++T L    TL +
Sbjct: 92  VLFMGAC----MSPPHLAIITSLCKGRTLYS 118

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 55.4 bits (134), Expect = 1e-09
 Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 11/60 (18%)

Query: 15  TPEFMAPEM----------YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
               +APE+           +  + +  DV+A G    E+   E+P+ +      I  ++
Sbjct: 197 WLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF-KTQPAEAIIWQM 255

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 78.2 bits (193), Expect = 2e-17
 Identities = 24/114 (21%), Positives = 49/114 (42%), Gaps = 4/114 (3%)

Query: 84  VKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEK 143
           +  Q   +         ++  +    +  +++G G++  V    D  T V  A   +++ 
Sbjct: 14  LYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKT 73

Query: 144 KLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
            ++ +  ++  EE  +LK L HPNI+  Y ++E     ++   LV E    G L
Sbjct: 74  SVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFE----DKRNYYLVMECYKGGEL 123

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 77.8 bits (192), Expect = 2e-17
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 5/105 (4%)

Query: 93  ESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERAR 152
                +    +SM  Y    ++IG GSF        T+ G      E+   +++  ER  
Sbjct: 11  VDLGTENLYFQSMEKY-VRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREE 69

Query: 153 FREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
            R E  +L  ++HPNIV +   +E    +   + +V +    G L
Sbjct: 70  SRREVAVLANMKHPNIVQYRESFE----ENGSLYIVMDYCEGGDL 110

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 41.6 bits (98), Expect = 7e-05
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TP +++PE+ E   Y+   D++A G  + E+ T ++ + E      +  K++S
Sbjct: 188 TPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAF-EAGSMKNLVLKIIS 239

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 76.2 bits (188), Expect = 6e-17
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 14/91 (15%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPN 167
           ++ EE +GRG+F  V +       VA+       K++ +++ER  F  E   L  + HPN
Sbjct: 10  IEVEEVVGRGAFGVVCKAKWRAKDVAI-------KQIESESERKAFIVELRQLSRVNHPN 62

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           IV  YG           + LV E    G+L 
Sbjct: 63  IVKLYGAC------LNPVCLVMEYAEGGSLY 87

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 67.7 bits (166), Expect = 5e-14
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV 65
           +  +MAPE++E  +Y E  DV+++G+ + E+ T   P+ E  GPA      V
Sbjct: 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV 217

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 75.7 bits (187), Expect = 8e-17
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 4/88 (4%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
             +EE+G+G+F  V R +   TG+  A   +  KKL+  +  +   EA + + LQHPNIV
Sbjct: 9   DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV 68

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTL 197
             +   +    +  +  LV +L+T G L
Sbjct: 69  RLHDSIQ----EESFHYLVFDLVTGGEL 92

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 76.6 bits (189), Expect = 8e-17
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 4/88 (4%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
           +  EE+G+G+F  V R +    G   A   +  KKL+  +  +   EA + + L+HPNIV
Sbjct: 14  QLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIV 73

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTL 197
             +        +  +  L+ +L+T G L
Sbjct: 74  RLHDSIS----EEGHHYLIFDLVTGGEL 97

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 75.4 bits (186), Expect = 1e-16
 Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 19/117 (16%)

Query: 93  ESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL------DTQTGVAVAWCELQEKKL- 145
           + P  + +     + +LK   ++G G F  V          +T   VAV       K L 
Sbjct: 7   KKPATEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAV-------KSLK 59

Query: 146 ---NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
                   A  ++E E+L+ L H NIV + G    T      I L+ E + SG+LK 
Sbjct: 60  PESGGNHIADLKKEIEILRNLYHENIVKYKGI--CTEDGGNGIKLIMEFLPSGSLKE 114

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 75.6 bits (186), Expect = 1e-16
 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 9/92 (9%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEM--LKGLQHP 166
           +  +E IG+G F  V+RG      VAV       K  +  E   +  EAE+     L+H 
Sbjct: 44  IVLQESIGKGRFGEVWRGKWRGEEVAV-------KIFSSREERSWFREAEIYQTVMLRHE 96

Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           NI+ F             + LV++    G+L 
Sbjct: 97  NILGFIAADNKDNGTWTQLWLVSDYHEHGSLF 128

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 45.9 bits (109), Expect = 3e-06
 Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 21/72 (29%)

Query: 15  TPEFMAPEMYEE-------HYDESVDVYAFGMCMLEMST--------SEY--PYMECIGP 57
           T  +MAPE+ ++          +  D+YA G+   E++          +Y  PY + +  
Sbjct: 214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 273

Query: 58  ----AQIYKKVV 65
                ++ K V 
Sbjct: 274 DPSVEEMRKVVC 285

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 75.8 bits (187), Expect = 1e-16
 Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 8/133 (6%)

Query: 65  VSVSITSAGPKVVFQPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVY 124
           V +   +   + +    +   P +   V    +    R+++  + + E E+GRG+   VY
Sbjct: 11  VDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVY 70

Query: 125 RGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY 184
           R     T    A  ++ +K     ++   R E  +L  L HPNI+     +E        
Sbjct: 71  RCKQKGTQKPYA-LKVLKKT---VDKKIVRTEIGVLLRLSHPNIIKLKEIFE----TPTE 122

Query: 185 IVLVTELMTSGTL 197
           I LV EL+T G L
Sbjct: 123 ISLVLELVTGGEL 135

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 74.6 bits (184), Expect = 2e-16
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 6/90 (6%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           Y    + +G G    V +  + +T    A      K L    +AR RE     +  Q P+
Sbjct: 19  YKVTSQVLGLGINGKVLQIFNKRTQEKFA-L----KMLQDCPKAR-REVELHWRASQCPH 72

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           IV     +E     RK +++V E +  G L
Sbjct: 73  IVRIVDVYENLYAGRKCLLIVMECLDGGEL 102

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 75.2 bits (185), Expect = 3e-16
 Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 10/132 (7%)

Query: 70  TSAGPKVVFQPISGVKPQSFERVESPEVKE----EERESMRGYLKFEEEIGRGSFKTVYR 125
                  +  P +   P   ++     VK     ++   +  Y    + +G G    V +
Sbjct: 21  PQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQ 80

Query: 126 GLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI 185
             + +T    A      K L    +AR RE     +  Q P+IV     +E     RK +
Sbjct: 81  IFNKRTQEKFA-L----KMLQDCPKAR-REVELHWRASQCPHIVRIVDVYENLYAGRKCL 134

Query: 186 VLVTELMTSGTL 197
           ++V E +  G L
Sbjct: 135 LIVMECLDGGEL 146

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 74.2 bits (183), Expect = 3e-16
 Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 4/88 (4%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
                +G+GSF  V +  D  T    A   + +      + +    E E+LK L HPNI+
Sbjct: 25  NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTL 197
             +   E          +V EL T G L
Sbjct: 85  KLFEILE----DSSSFYIVGELYTGGEL 108

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 74.7 bits (184), Expect = 3e-16
 Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 21/125 (16%)

Query: 84  VKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL-----DTQTGVAVAWC 138
           V P +FE      V E  +E     +  ++ +G G F  V  G        +  VA+   
Sbjct: 23  VDPHTFEDPTQT-VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI--- 78

Query: 139 ELQEKKLNK----AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTS 194
               K L       +R  F  EA ++    HPNI+   G   VT +K   I  VTE M +
Sbjct: 79  ----KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV--VTKSKPVMI--VTEYMEN 130

Query: 195 GTLKT 199
           G+L +
Sbjct: 131 GSLDS 135

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 74.4 bits (183), Expect = 3e-16
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 9/92 (9%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEM--LKGLQHP 166
           ++  ++IG+G +  V+ G      VAV       K     E A +  E E+     ++H 
Sbjct: 39  IQMVKQIGKGRYGEVWMGKWRGEKVAV-------KVFFTTEEASWFRETEIYQTVLMRHE 91

Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           NI+ F             + L+T+   +G+L 
Sbjct: 92  NILGFIAADIKGTGSWTQLYLITDYHENGSLY 123

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 7/47 (14%)

Query: 15  TPEFMAPEMYEE-------HYDESVDVYAFGMCMLEMSTSEYPYMEC 54
           T  +M PE+ +E             D+Y+FG+ + E++         
Sbjct: 209 TKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIV 255

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 73.9 bits (182), Expect = 3e-16
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 9/91 (9%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEM--LKGLQHP 166
           +   E +G+G +  V+RG      VAV       K  +  +   +  E E+     L+H 
Sbjct: 10  ITLLECVGKGRYGEVWRGSWQGENVAV-------KIFSSRDEKSWFRETELYNTVMLRHE 62

Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           NI+ F      +      + L+T     G+L
Sbjct: 63  NILGFIASDMTSRHSSTQLWLITHYHEMGSL 93

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 47.0 bits (112), Expect = 8e-07
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 7/47 (14%)

Query: 15  TPEFMAPEMYEE-------HYDESVDVYAFGMCMLEMSTSEYPYMEC 54
           T  +MAPE+ +E          + VD++AFG+ + E++         
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 226

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 74.4 bits (183), Expect = 4e-16
 Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 24/149 (16%)

Query: 60  IYKKVVSVSITSAGPKVVFQPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGS 119
           +YKK  S ++   G   V   +S + P+  +      V+          + F E IGRG 
Sbjct: 47  LYKKAGSENLYFQGANTVHIDLSALNPELVQ-----AVQHVVIGPSSLIVHFNEVIGRGH 101

Query: 120 FKTVYRGL-----DTQTGVAVAWCELQEKKLNK----AERARFREEAEMLKGLQHPNIVS 170
           F  VY G        +   AV       K LN+     E ++F  E  ++K   HPN++S
Sbjct: 102 FGCVYHGTLLDNDGKKIHCAV-------KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154

Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             G   + L      ++V   M  G L+ 
Sbjct: 155 LLG---ICLRSEGSPLVVLPYMKHGDLRN 180

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 74.3 bits (183), Expect = 5e-16
 Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 4/88 (4%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
                +G+GSF  V +  D  T    A   + +      + +    E E+LK L HPNI+
Sbjct: 25  NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTL 197
             +   E          +V EL T G L
Sbjct: 85  KLFEILE----DSSSFYIVGELYTGGEL 108

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 73.0 bits (180), Expect = 6e-16
 Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 5/88 (5%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
            F+ ++G G+F  V+   +  +G+     +   K  ++    +   E E+LK L HPNI+
Sbjct: 25  IFKRKLGSGAFGDVHLVEERSSGLERV-IKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTL 197
             +  +E        + +V E    G L
Sbjct: 84  KIFEVFE----DYHNMYIVMETCEGGEL 107

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 72.7 bits (179), Expect = 7e-16
 Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 15/113 (13%)

Query: 87  QSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN 146
            S +  +  E+ + +       +   + IG GSF TVY+G      VAV    L      
Sbjct: 11  GSRDAADDWEIPDGQ-------ITVGQRIGSGSFGTVYKGKWHGD-VAVK--MLNVTAPT 60

Query: 147 KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             +   F+ E  +L+  +H NI+ F G    +   +  I  VT+     +L  
Sbjct: 61  PQQLQAFKNEVGVLRKTRHVNILLFMG---YSTAPQLAI--VTQWCEGSSLYH 108

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 53.8 bits (130), Expect = 4e-09
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 4/56 (7%)

Query: 15  TPEFMAPEM----YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           +  +MAPE+        Y    DVYAFG+ + E+ T + PY       QI + V  
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 73.1 bits (180), Expect = 8e-16
 Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 28/139 (20%)

Query: 71  SAGPKVVFQPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL--- 127
           + G     Q      PQ F       +K       R  +  + E+G G+F  V+      
Sbjct: 12  TEGKGSGLQGHIIENPQYFSDACVHHIK-------RRDIVLKWELGEGAFGKVFLAECHN 64

Query: 128 ----DTQTGVAVAWCELQEKKLNKA---ERARFREEAEMLKGLQHPNIVSFYGYWEVTLT 180
                 +  VAV       K L +A    R  F+ EAE+L  LQH +IV F+G      T
Sbjct: 65  LLPEQDKMLVAV-------KALKEASESARQDFQREAELLTMLQHQHIVRFFG----VCT 113

Query: 181 KRKYIVLVTELMTSGTLKT 199
           + + +++V E M  G L  
Sbjct: 114 EGRPLLMVFEYMRHGDLNR 132

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 73.1 bits (180), Expect = 8e-16
 Identities = 33/125 (26%), Positives = 47/125 (37%), Gaps = 21/125 (16%)

Query: 84  VKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL-----DTQTGVAVAWC 138
            +P ++E       +   RE     +  E+ IG G    V  G           VA+   
Sbjct: 27  AEPHTYEEPGRA-GRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAI--- 82

Query: 139 ELQEKKLNK----AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTS 194
               K L       +R  F  EA ++    HPNI+   G   VT  +   I  VTE M +
Sbjct: 83  ----KALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGV--VTRGRLAMI--VTEYMEN 134

Query: 195 GTLKT 199
           G+L T
Sbjct: 135 GSLDT 139

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 73.7 bits (181), Expect = 9e-16
 Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 17/121 (14%)

Query: 84  VKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL--DTQTGVAVAWCELQ 141
              ++   +       ++ E  R  +  + ++G G +  VY G+       VAV      
Sbjct: 197 APKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV------ 250

Query: 142 EKKLNKA---ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
             K  K    E   F +EA ++K ++HPN+V   G      T+     ++TE MT G L 
Sbjct: 251 --KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG----VCTREPPFYIITEFMTYGNLL 304

Query: 199 T 199
            
Sbjct: 305 D 305

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 72.8 bits (179), Expect = 1e-15
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 8/109 (7%)

Query: 95  PEVKEEERESMRGYLKFEEEIGRGSFKTVYRG----LDTQTGVAVAWCELQEKKLNKAER 150
               ++       +LK+  ++G+G+F +V       L   TG  VA  +LQ    ++  +
Sbjct: 11  LYACQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ--Q 68

Query: 151 ARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             F+ E ++LK L    IV + G        R+ + LV E + SG L+ 
Sbjct: 69  RDFQREIQILKALHSDFIVKYRGV--SYGPGRQSLRLVMEYLPSGCLRD 115

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 73.0 bits (179), Expect = 1e-15
 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 10/92 (10%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEM--LKGLQHP 166
           LK  E IGRG +  VY+G   +  VAV       K  + A R  F  E  +  +  ++H 
Sbjct: 15  LKLLELIGRGRYGAVYKGSLDERPVAV-------KVFSFANRQNFINEKNIYRVPLMEHD 67

Query: 167 NIVSFYGY-WEVTLTKRKYIVLVTELMTSGTL 197
           NI  F      VT   R   +LV E   +G+L
Sbjct: 68  NIARFIVGDERVTADGRMEYLLVMEYYPNGSL 99

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 38.7 bits (90), Expect = 7e-04
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 8/40 (20%)

Query: 15  TPEFMAPEMYE--------EHYDESVDVYAFGMCMLEMST 46
           T  +MAPE+ E        E   + VD+YA G+   E+  
Sbjct: 191 TIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM 230

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 72.3 bits (178), Expect = 1e-15
 Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 24/128 (18%)

Query: 81  ISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL-----DTQTGVAV 135
           +S + P+  +      V+          + F E IGRG F  VY G        +   AV
Sbjct: 4   LSALNPELVQ-----AVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 58

Query: 136 AWCELQEKKLNK----AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTEL 191
                  K LN+     E ++F  E  ++K   HPN++S  G   + L      ++V   
Sbjct: 59  -------KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG---ICLRSEGSPLVVLPY 108

Query: 192 MTSGTLKT 199
           M  G L+ 
Sbjct: 109 MKHGDLRN 116

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 71.9 bits (177), Expect = 2e-15
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 6/95 (6%)

Query: 103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKG 162
             +  Y   E  IGRGS+  V   +   T +  A  ++ +  +   +R  F++E E++K 
Sbjct: 5   GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDR--FKQEIEIMKS 62

Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           L HPNI+  Y  +E        I LV EL T G L
Sbjct: 63  LDHPNIIRLYETFE----DNTDIYLVMELCTGGEL 93

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 72.4 bits (178), Expect = 2e-15
 Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 18/117 (15%)

Query: 92  VESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL------DTQTGVAVAWCELQEKKL 145
           + S     +  +    +LKF +++G+G+F +V          +T   VAV       KKL
Sbjct: 26  MGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAV-------KKL 78

Query: 146 NKA---ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             +       F  E E+LK LQH NIV + G        R+ + L+ E +  G+L+ 
Sbjct: 79  QHSTEEHLRDFEREIEILKSLQHDNIVKYKGV--CYSAGRRNLKLIMEYLPYGSLRD 133

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 72.4 bits (178), Expect = 2e-15
 Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 21/113 (18%)

Query: 97  VKEEERESMRGYLKFEEEIGRGSFKTVYRGL------DTQTGVAVAWCELQEKKLNKA-- 148
           V +   E     +  ++ IG G F  VY+G+        +  VA+       K L     
Sbjct: 34  VLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAI-------KTLKAGYT 86

Query: 149 --ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             +R  F  EA ++    H NI+   G   ++  K   I  +TE M +G L  
Sbjct: 87  EKQRVDFLGEAGIMGQFSHHNIIRLEGV--ISKYKPMMI--ITEYMENGALDK 135

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 71.8 bits (177), Expect = 2e-15
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 12/91 (13%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA---ERARFREEAEMLKGLQHP 166
            F E +G G+F  V+      TG   A      K + K+     +    E  +LK ++H 
Sbjct: 12  IFMEVLGSGAFSEVFLVKQRLTGKLFA-L----KCIKKSPAFRDSSLENEIAVLKKIKHE 66

Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           NIV+    +E       +  LV +L++ G L
Sbjct: 67  NIVTLEDIYE----STTHYYLVMQLVSGGEL 93

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 72.4 bits (178), Expect = 2e-15
 Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 14/126 (11%)

Query: 73  GPKVVFQPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTG 132
           GP  +   +    P  F +  +    +        Y K +  +G+GSF  V    D  TG
Sbjct: 1   GPGSMMDHLH-ATPGMFVQHSTAIFSDR-------Y-KGQRVLGKGSFGEVILCKDKITG 51

Query: 133 VAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTEL 191
              A   + ++++  K ++     E ++LK L HPNI+  Y ++E     + Y  LV E+
Sbjct: 52  QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE----DKGYFYLVGEV 107

Query: 192 MTSGTL 197
            T G L
Sbjct: 108 YTGGEL 113

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 71.1 bits (175), Expect = 2e-15
 Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 3/93 (3%)

Query: 105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ 164
              Y +    IG GS+    +      G  + W EL    + +AE+     E  +L+ L+
Sbjct: 5   AEDY-EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK 63

Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           HPNIV +Y           YI  V E    G L
Sbjct: 64  HPNIVRYYDRIIDRTNTTLYI--VMEYCEGGDL 94

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 71.2 bits (175), Expect = 3e-15
 Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 19/115 (16%)

Query: 95  PEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL------DTQTGVAVAWCELQEKKL--- 145
            +   +     + YLK   ++G G F  V           T   VAV       K L   
Sbjct: 19  FQGPGDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAV-------KALKAD 71

Query: 146 -NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
                R+ +++E ++L+ L H +I+ + G           + LV E +  G+L+ 
Sbjct: 72  AGPQHRSGWKQEIDILRTLYHEHIIKYKGC--CEDAGAASLQLVMEYVPLGSLRD 124

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 71.3 bits (175), Expect = 3e-15
 Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 9/91 (9%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEM--LKGLQHP 166
           L+  E   RG F  V++       VAV       K     ++  ++ E E+  L G++H 
Sbjct: 26  LQLLEVKARGRFGCVWKAQLLNEYVAV-------KIFPIQDKQSWQNEYEVYSLPGMKHE 78

Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           NI+ F G  +   +    + L+T     G+L
Sbjct: 79  NILQFIGAEKRGTSVDVDLWLITAFHEKGSL 109

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 44.7 bits (106), Expect = 6e-06
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 6/52 (11%)

Query: 15  TPEFMAPEMYEEH------YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
           T  +MAPE+ E            +D+YA G+ + E+++        +    +
Sbjct: 196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML 247

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 71.6 bits (176), Expect = 4e-15
 Identities = 30/125 (24%), Positives = 46/125 (36%), Gaps = 22/125 (17%)

Query: 86  PQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL-------DTQTGVAVAWC 138
           P           K    E  R  +++  +IG G+F  V++         +  T VAV   
Sbjct: 26  PMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAV--- 82

Query: 139 ELQEKKLNK----AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTS 194
               K L +      +A F+ EA ++    +PNIV   G         K + L+ E M  
Sbjct: 83  ----KMLKEEASADMQADFQREAALMAEFDNPNIVKLLG----VCAVGKPMCLLFEYMAY 134

Query: 195 GTLKT 199
           G L  
Sbjct: 135 GDLNE 139

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 71.1 bits (175), Expect = 4e-15
 Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 21/110 (19%)

Query: 100 EERESMRGYLKFEEEIGRGSFKTVYRGL-------DTQTGVAVAWCELQEKKLNKA---E 149
             +   R  +  + E+G G+F  V+            +  VAV       K L       
Sbjct: 8   HVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAV-------KALKDPTLAA 60

Query: 150 RARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           R  F+ EAE+L  LQH +IV FYG           +++V E M  G L  
Sbjct: 61  RKDFQREAELLTNLQHEHIVKFYG----VCGDGDPLIMVFEYMKHGDLNK 106

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 71.7 bits (176), Expect = 4e-15
 Identities = 23/111 (20%), Positives = 50/111 (45%), Gaps = 6/111 (5%)

Query: 87  QSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN 146
           +   +   P+  E ++ S+  Y    EE+G G+F  V+R ++  TG      +       
Sbjct: 31  EDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFV-AKFINTP-Y 88

Query: 147 KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
             ++   + E  ++  L HP +++ +  +E     +  +VL+ E ++ G L
Sbjct: 89  PLDKYTVKNEISIMNQLHHPKLINLHDAFE----DKYEMVLILEFLSGGEL 135

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 70.7 bits (174), Expect = 4e-15
 Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 14/97 (14%)

Query: 106 RGYLKFEEEIGRGSFKTVYRG-LDTQTGVAVAWCELQEKKLNKA--ERARFREEAEMLKG 162
              L F +E+G G F  V  G    Q  VA+       K + +       F EEA+++  
Sbjct: 23  PKDLTFLKELGTGQFGVVKYGKWRGQYDVAI-------KMIKEGSMSEDEFIEEAKVMMN 75

Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           L H  +V  YG      TK++ I ++TE M +G L  
Sbjct: 76  LSHEKLVQLYG----VCTKQRPIFIITEYMANGCLLN 108

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 71.8 bits (176), Expect = 4e-15
 Identities = 28/145 (19%), Positives = 61/145 (42%), Gaps = 10/145 (6%)

Query: 57  PAQIYKKVVSVSITSAGPKVVFQPISGVKPQSF----ERVESPEVKEEERESMRGYLKFE 112
           P    K+     +   G  V  +        ++     +   P+  E + + +  +    
Sbjct: 103 PGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIH 162

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFY 172
           EE+G G+F  V+R  +  TG   A  +      +++++   R+E + +  L+HP +V+ +
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFA-AKFVMTP-HESDKETVRKEIQTMSVLRHPTLVNLH 220

Query: 173 GYWEVTLTKRKYIVLVTELMTSGTL 197
             +E        +V++ E M+ G L
Sbjct: 221 DAFE----DDNEMVMIYEFMSGGEL 241

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 70.8 bits (174), Expect = 4e-15
 Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 18/109 (16%)

Query: 100 EERESMRGYLKFEEEIGRGSFKTVYRGL------DTQTGVAVAWCELQEKKLNK---AER 150
           +  +    +LKF +++G+G+F +V          +T   VAV       KKL        
Sbjct: 3   DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAV-------KKLQHSTEEHL 55

Query: 151 ARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             F  E E+LK LQH NIV + G        R+ + L+ E +  G+L+ 
Sbjct: 56  RDFEREIEILKSLQHDNIVKYKGV--CYSAGRRNLKLIMEYLPYGSLRD 102

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 70.9 bits (174), Expect = 5e-15
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 3/97 (3%)

Query: 101 ERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEML 160
            + +        + +G+G+   V+RG   +TG   A          +        E E+L
Sbjct: 3   SQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR-PVDVQMREFEVL 61

Query: 161 KGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           K L H NIV  +   E   T  ++ VL+ E    G+L
Sbjct: 62  KKLNHKNIVKLFAIEEE--TTTRHKVLIMEFCPCGSL 96

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 71.1 bits (175), Expect = 5e-15
 Identities = 17/95 (17%), Positives = 43/95 (45%), Gaps = 7/95 (7%)

Query: 103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKG 162
           + +       E++GRG F  V+R ++T +       +  + K    ++   ++E  +L  
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYM-AKFVKVK--GTDQVLVKKEISILNI 57

Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
            +H NI+  +  +E      + +V++ E ++   +
Sbjct: 58  ARHRNILHLHESFE----SMEELVMIFEFISGLDI 88

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 70.8 bits (174), Expect = 6e-15
 Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 24/130 (18%)

Query: 81  ISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL-------DTQTGV 133
           ++ V P+ F   +      +E E  R  +    E+G+GSF  VY G+       + +T V
Sbjct: 1   MASVNPEYFSAADVY--VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV 58

Query: 134 AVAWCELQEKKLNK----AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVT 189
           A+       K +N+     ER  F  EA ++K     ++V   G     +++ +  +++ 
Sbjct: 59  AI-------KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG----VVSQGQPTLVIM 107

Query: 190 ELMTSGTLKT 199
           ELMT G LK+
Sbjct: 108 ELMTRGDLKS 117

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 70.4 bits (173), Expect = 6e-15
 Identities = 26/114 (22%), Positives = 43/114 (37%), Gaps = 19/114 (16%)

Query: 95  PEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL-----DTQTGVAVAWCELQEKKLNK-- 147
            EVK+      R     +  IG+G F  VY G        +   A+       K L++  
Sbjct: 9   AEVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAI-------KSLSRIT 61

Query: 148 --AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
              +   F  E  +++GL HPN+++  G   + L       ++   M  G L  
Sbjct: 62  EMQQVEAFLREGLLMRGLNHPNVLALIG---IMLPPEGLPHVLLPYMCHGDLLQ 112

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 69.9 bits (172), Expect = 6e-15
 Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 14/97 (14%)

Query: 106 RGYLKFEEEIGRGSFKTVYRG-LDTQTGVAVAWCELQEKKLNKA--ERARFREEAEMLKG 162
           R  +   +E+G G F  V  G    Q  VAV       K + +       F +EA+ +  
Sbjct: 7   REEITLLKELGSGQFGVVKLGKWKGQYDVAV-------KMIKEGSMSEDEFFQEAQTMMK 59

Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           L HP +V FYG    +     YI  VTE +++G L  
Sbjct: 60  LSHPKLVKFYGV--CSKEYPIYI--VTEYISNGCLLN 92

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 71.3 bits (175), Expect = 7e-15
 Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 23/138 (16%)

Query: 71  SAGPKVVFQPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQ 130
           S+G + ++     + P  + R +  ++ E        Y     ++G G++  V    +  
Sbjct: 8   SSGRENLYFQGIAINPGMYVRKKEGKIGES-------Y-FKVRKLGSGAYGEVLLCKEKN 59

Query: 131 TGVAVA-----------WCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL 179
                A                + K  +        E  +LK L HPNI+  +  +E   
Sbjct: 60  GHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFE--- 116

Query: 180 TKRKYIVLVTELMTSGTL 197
             +KY  LVTE    G L
Sbjct: 117 -DKKYFYLVTEFYEGGEL 133

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 69.9 bits (172), Expect = 8e-15
 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 11/95 (11%)

Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQ 164
              LK  + IG+G F  V  G      VAV       K +   A    F  EA ++  L+
Sbjct: 20  MKELKLLQTIGKGEFGDVMLGDYRGNKVAV-------KCIKNDATAQAFLAEASVMTQLR 72

Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           H N+V   G   V + ++  + +VTE M  G+L  
Sbjct: 73  HSNLVQLLG---VIVEEKGGLYIVTEYMAKGSLVD 104

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 69.5 bits (171), Expect = 9e-15
 Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 106 RGYLKFEEEIGRGSFKTVYRG-LDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ 164
              L F +EIG G F  V+ G    +  VA+        +        F EEAE++  L 
Sbjct: 7   PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-----REGAMSEEDFIEEAEVMMKLS 61

Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           HP +V  YG       ++  I LVTE M  G L  
Sbjct: 62  HPKLVQLYG----VCLEQAPICLVTEFMEHGCLSD 92

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 70.4 bits (173), Expect = 1e-14
 Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 15/112 (13%)

Query: 92  VESPEVKEEERESMRGYLKFE------EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL 145
           +++  V    ++  R  ++F       E+IG GS+    R +   T +  A      K +
Sbjct: 1   MQTVGVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFA-V----KII 55

Query: 146 NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           +K++R    E   +L+  QHPNI++    ++      KY+ +VTELM  G L
Sbjct: 56  DKSKRDPTEEIEILLRYGQHPNIITLKDVYD----DGKYVYVVTELMKGGEL 103

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 70.2 bits (172), Expect = 1e-14
 Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 9/117 (7%)

Query: 85  KPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK 144
                   E+   +      ++     +  IG+GS+  V   ++ QT    A  ++  K 
Sbjct: 4   HHHHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRA-IKIMNKN 62

Query: 145 ----LNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
               +N  +  R + E  ++K L HPNI   Y  +E      +YI LV EL   G L
Sbjct: 63  KIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE----DEQYICLVMELCHGGHL 115

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 70.1 bits (172), Expect = 1e-14
 Identities = 28/132 (21%), Positives = 45/132 (34%), Gaps = 23/132 (17%)

Query: 79  QPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL-------DTQT 131
             ++   P  +          + +E  R  +     +G G+F  VY G         +  
Sbjct: 44  TIMTDYNPN-YCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPL 102

Query: 132 GVAVAWCELQEKKLNK----AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL 187
            VAV       K L +     +   F  EA ++    H NIV   G       +     +
Sbjct: 103 QVAV-------KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG----VSLQSLPRFI 151

Query: 188 VTELMTSGTLKT 199
           + ELM  G LK+
Sbjct: 152 LLELMAGGDLKS 163

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 69.7 bits (171), Expect = 1e-14
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 6/86 (6%)

Query: 112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSF 171
           ++ +G G    V      +TG   A      K L  + +AR +E     +    P+IV  
Sbjct: 34  KQVLGLGVNGKVLECFHRRTGQKCA-L----KLLYDSPKAR-QEVDHHWQASGGPHIVCI 87

Query: 172 YGYWEVTLTKRKYIVLVTELMTSGTL 197
              +E     ++ ++++ E M  G L
Sbjct: 88  LDVYENMHHGKRCLLIIMECMEGGEL 113

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 70.1 bits (172), Expect = 2e-14
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 15/122 (12%)

Query: 79  QPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWC 138
           +P       + +            +     LK  + IG+G F  V  G      VAV   
Sbjct: 169 KPKVMEGTVAAQDEFYRSGWALNMKE----LKLLQTIGKGEFGDVMLGDYRGNKVAV--- 221

Query: 139 ELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
               K +   A    F  EA ++  L+H N+V   G   V + ++  + +VTE M  G+L
Sbjct: 222 ----KCIKNDATAQAFLAEASVMTQLRHSNLVQLLG---VIVEEKGGLYIVTEYMAKGSL 274

Query: 198 KT 199
             
Sbjct: 275 VD 276

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 69.3 bits (170), Expect = 2e-14
 Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 18/107 (16%)

Query: 104 SMRGYLKFE--EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE--RARFREEAEM 159
           S+R    FE    +G+G+F  V +  +       A      KK+   E   +    E  +
Sbjct: 1   SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAI-----KKIRHTEEKLSTILSEVML 55

Query: 160 LKGLQHPNIVSFYGYWE---------VTLTKRKYIVLVTELMTSGTL 197
           L  L H  +V +Y  W            + K+  + +  E   +GTL
Sbjct: 56  LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL 102

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 5/52 (9%)

Query: 15  TPEFMAPEMYEE--HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
           T  ++A E+ +   HY+E +D+Y+ G+   EM       ME      I KK+
Sbjct: 193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGME---RVNILKKL 241

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 69.3 bits (170), Expect = 2e-14
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 93  ESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQ-EKKLNKAERA 151
           +     +    ++  + + E++IGRG F  VYR      GV VA  ++Q    ++   RA
Sbjct: 19  QKALRPDMGYNTLANF-RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARA 77

Query: 152 RFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
              +E ++LK L HPN++ +Y  +     +   + +V EL  +G L
Sbjct: 78  DCIKEIDLLKQLNHPNVIKYYASFI----EDNELNIVLELADAGDL 119

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY-MECIGPAQIYKKVVS 66
           TP +M+PE   E+ Y+   D+++ G  + EM+  + P+  + +    + KK+  
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ 252

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 69.3 bits (170), Expect = 2e-14
 Identities = 23/116 (19%), Positives = 39/116 (33%), Gaps = 7/116 (6%)

Query: 85  KPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK 144
            P             ++        +  E IG+G F  V R ++ +TG   A   +   K
Sbjct: 2   SPGISGGGGGILDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAK 61

Query: 145 LNKAE---RARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
              +        + EA +   L+HP+IV     +         + +V E M    L
Sbjct: 62  FTSSPGLSTEDLKREASICHMLKHPHIVELLETYS----SDGMLYMVFEFMDGADL 113

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 69.3 bits (170), Expect = 2e-14
 Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 26/119 (21%)

Query: 92  VESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL-------DTQTGVAVAWCELQEKK 144
               ++KE  R++    +     +G G+F  VY G         +   VAV       K 
Sbjct: 19  SSISDLKEVPRKN----ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAV-------KT 67

Query: 145 LNK----AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           L +     +   F  EA ++    H NIV   G      +  ++I  + ELM  G LK+
Sbjct: 68  LPEVCSEQDELDFLMEALIISKFNHQNIVRCIGV--SLQSLPRFI--LMELMAGGDLKS 122

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 68.8 bits (169), Expect = 2e-14
 Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 22/105 (20%)

Query: 106 RGYLKFEEEIGRGSFKTVYRGL-------DTQTGVAVAWCELQEKKLNK----AERARFR 154
           R  L   + +G G F  V +            T VAV       K L +    +E     
Sbjct: 22  RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAV-------KMLKENASPSELRDLL 74

Query: 155 EEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            E  +LK + HP+++  YG      ++   ++L+ E    G+L+ 
Sbjct: 75  SEFNVLKQVNHPHVIKLYG----ACSQDGPLLLIVEYAKYGSLRG 115

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 68.8 bits (169), Expect = 2e-14
 Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 13/108 (12%)

Query: 94  SPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL--DTQTGVAVAWCELQEKKLNKAERA 151
           SP   + E E  R  +  + ++G G +  VY G+       VAV        K +  E  
Sbjct: 2   SPNYDKWEME--RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVE 54

Query: 152 RFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            F +EA ++K ++HPN+V   G      T+     ++TE MT G L  
Sbjct: 55  EFLKEAAVMKEIKHPNLVQLLG----VCTREPPFYIITEFMTYGNLLD 98

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 69.0 bits (169), Expect = 2e-14
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 12/142 (8%)

Query: 56  GPAQIYKKVVSVSITSAGPKVVFQPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEI 115
           G A     +     + +       P +          +   V  E RE +      +  +
Sbjct: 8   GQAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWM-THQPRV 66

Query: 116 GRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYW 175
           GRGSF  V+R  D QTG   A   +++ +L         EE     GL  P IV  YG  
Sbjct: 67  GRGSFGEVHRMKDKQTGFQCA---VKKVRLEVFR----VEELVACAGLSSPRIVPLYG-- 117

Query: 176 EVTLTKRKYIVLVTELMTSGTL 197
              + +  ++ +  EL+  G+L
Sbjct: 118 --AVREGPWVNIFMELLEGGSL 137

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
           T   MAPE+      D  VD+++    ML M    +P+ +        K  
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIA 269

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 69.2 bits (170), Expect = 2e-14
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 96  EVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFRE 155
            V +++       L   E+IGRG+F  V+ G        VA    +E  L    +A+F +
Sbjct: 103 AVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQ 161

Query: 156 EAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           EA +LK   HPNIV   G      T+++ I +V EL+  G   T
Sbjct: 162 EARILKQYSHPNIVRLIGV----CTQKQPIYIVMELVQGGDFLT 201

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 68.4 bits (168), Expect = 3e-14
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 26/115 (22%)

Query: 96  EVKEEERESMRGYLKFEEEIGRGSFKTVYRGL-------DTQTGVAVAWCELQEKKLNK- 147
           ++KE    +    ++F EE+G   F  VY+G        +    VA+       K L   
Sbjct: 2   KLKEISLSA----VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAI-------KTLKDK 50

Query: 148 ---AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
                R  FR EA +   LQHPN+V   G   VT  +   +  +    + G L  
Sbjct: 51  AEGPLREEFRHEAMLRARLQHPNVVCLLGV--VTKDQPLSM--IFSYCSHGDLHE 101

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 68.5 bits (168), Expect = 3e-14
 Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 8/91 (8%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL---NKAERARFREEAEMLKGLQHP 166
            F +++G G F  V        G   A      K++    + +R   + EA+M +   HP
Sbjct: 32  LFIQKLGEGGFSYVDLVEGLHDGHFYAL-----KRILCHEQQDREEAQREADMHRLFNHP 86

Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           NI+    Y       +    L+      GTL
Sbjct: 87  NILRLVAYCLRERGAKHEAWLLLPFFKRGTL 117

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 68.4 bits (168), Expect = 3e-14
 Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 21/103 (20%)

Query: 106 RGYLKFEEEIGRGSFKTVYRGL-----DTQTGVAVAWCELQEKKLNK----AERARFREE 156
           R  +     +G G F  VY G+       +  VAV       K   K      + +F  E
Sbjct: 11  REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAV-------KTCKKDCTLDNKEKFMSE 63

Query: 157 AEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           A ++K L HP+IV   G   +   +  +I  + EL   G L  
Sbjct: 64  AVIMKNLDHPHIVKLIG---IIEEEPTWI--IMELYPYGELGH 101

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 68.1 bits (167), Expect = 4e-14
 Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 23/106 (21%)

Query: 106 RGYLKFEEEIGRGSFKTVYRGL---------DTQTGVAVAWCELQEKKLNKA---ERARF 153
              L F E +G+G+F  +++G+           +T V +       K L+KA       F
Sbjct: 7   NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLL-------KVLDKAHRNYSESF 59

Query: 154 REEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            E A M+  L H ++V  YG           +  V E +  G+L T
Sbjct: 60  FEAASMMSKLSHKHLVLNYGV--CVCGDENIL--VQEFVKFGSLDT 101

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 68.7 bits (168), Expect = 4e-14
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 3/97 (3%)

Query: 101 ERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEML 160
            + +        + +G+G+   V+RG   +TG   A          +        E E+L
Sbjct: 3   SQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR-PVDVQMREFEVL 61

Query: 161 KGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           K L H NIV  +   E   T  ++ VL+ E    G+L
Sbjct: 62  KKLNHKNIVKLFAIEEE--TTTRHKVLIMEFCPCGSL 96

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 68.1 bits (167), Expect = 4e-14
 Identities = 24/100 (24%), Positives = 36/100 (36%), Gaps = 18/100 (18%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
           K  E IG G F  V++      G          K++      +   E + L  L H NIV
Sbjct: 14  KEIELIGSGGFGQVFKAKHRIDGKTYVI-----KRVKY-NNEKAEREVKALAKLDHVNIV 67

Query: 170 SFYGYWE------------VTLTKRKYIVLVTELMTSGTL 197
            + G W+             + +K K + +  E    GTL
Sbjct: 68  HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTL 107

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYME 53
           T  +M+PE      Y + VD+YA G+ + E+        E
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE 223

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 68.6 bits (168), Expect = 4e-14
 Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 17/120 (14%)

Query: 84  VKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRG-LDTQTGVAVAWCELQE 142
                  + ++  + ++  E  R  L+ E ++G+G F  V+ G  +  T VA+       
Sbjct: 161 TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAI------- 213

Query: 143 KKLNKA---ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            K  K        F +EA+++K L+H  +V  Y    V   +  YI  VTE M+ G+L  
Sbjct: 214 -KTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA---VVSEEPIYI--VTEYMSKGSLLD 267

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 68.1 bits (167), Expect = 4e-14
 Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 8/110 (7%)

Query: 85  KPQSFERVESPEVKEEERESMRGYLKFE--EEIGRGSFKTVYRGLDTQTGVAVAWCELQE 142
           + ++ E ++SP       ES      F+    +G GS+  V++    + G   A      
Sbjct: 34  RGEASETLQSPGYDPSRPES-FFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMS 92

Query: 143 KKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTEL 191
                 +RAR   E    + + QHP  V     WE    +   + L TEL
Sbjct: 93  PFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE----EGGILYLQTEL 138

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 51.9 bits (125), Expect = 2e-08
 Identities = 14/57 (24%), Positives = 29/57 (50%)

Query: 15  TPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITS 71
            P +MAPE+ +  Y  + DV++ G+ +LE++ +        G  Q+ +  +    T+
Sbjct: 219 DPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTA 275

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 67.6 bits (166), Expect = 5e-14
 Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 8/92 (8%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFRE----EAEMLKGLQH 165
           +  EE+G G F  V +     TG   A   +++++L+ + R   RE    E  +L+ ++H
Sbjct: 8   EMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRH 67

Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           PNI++ +  +E     +  +VL+ EL++ G L
Sbjct: 68  PNIITLHDIFE----NKTDVVLILELVSGGEL 95

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 67.6 bits (166), Expect = 6e-14
 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 21/109 (19%)

Query: 100 EERESMRGYLKFEEEIGRGSFKTVYRGL-----DTQTGVAVAWCELQEKKLNK----AER 150
            + E  R  ++    IG G F  V++G+     +    VA+       K        + R
Sbjct: 8   RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAI-------KTCKNCTSDSVR 60

Query: 151 ARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            +F +EA  ++   HP+IV   G   V      +I  + EL T G L++
Sbjct: 61  EKFLQEALTMRQFDHPHIVKLIG---VITENPVWI--IMELCTLGELRS 104

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 68.4 bits (167), Expect = 7e-14
 Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 17/119 (14%)

Query: 85  KPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRG-LDTQTGVAVAWCELQEK 143
                 + ++  + ++  E  R  L+ E ++G+G F  V+ G  +  T VA+        
Sbjct: 245 TVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAI-------- 296

Query: 144 KLNKA---ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           K  K        F +EA+++K L+H  +V  Y    V   +  YI  VTE M+ G+L  
Sbjct: 297 KTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA---VVSEEPIYI--VTEYMSKGSLLD 350

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 67.2 bits (165), Expect = 7e-14
 Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 11/95 (11%)

Query: 106 RGYLKFEEEIGRGSFKTVYRG-LDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ 164
           R  LK  E +G G F  V+ G  +  T VAV        K        F  EA ++K LQ
Sbjct: 12  RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-----KQGSMSPDAFLAEANLMKQLQ 66

Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           H  +V  Y    V   +  YI  +TE M +G+L  
Sbjct: 67  HQRLVRLYA---VVTQEPIYI--ITEYMENGSLVD 96

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 67.7 bits (166), Expect = 7e-14
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 16/124 (12%)

Query: 83  GVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL-----DTQTGVAVAW 137
           G+  +  E++E   +                 +G+G F +V          +   VAV  
Sbjct: 6   GISDELKEKLEDVLIP-------EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVK- 57

Query: 138 CELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYG--YWEVTLTKRKYIVLVTELMTSG 195
             L+   +  ++   F  EA  +K   HP++    G         +    +++   M  G
Sbjct: 58  -MLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHG 116

Query: 196 TLKT 199
            L  
Sbjct: 117 DLHA 120

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 67.8 bits (166), Expect = 9e-14
 Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 11/113 (9%)

Query: 91  RVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAER 150
              + + +    +++R      + +G G+   V    + +T   VA   + ++K      
Sbjct: 119 FDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSA 178

Query: 151 ------ARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
                      E E+LK L HP I+    +++    +  YIVL  ELM  G L
Sbjct: 179 READPALNVETEIEILKKLNHPCIIKIKNFFD---AEDYYIVL--ELMEGGEL 226

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 67.3 bits (165), Expect = 1e-13
 Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 8/100 (8%)

Query: 102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE----RARFREEA 157
           +E++  Y    EE+G G F  V +  +  TG+  A   +++++   +     R     E 
Sbjct: 6   QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65

Query: 158 EMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
            +LK +QHPN+++ +  +E     +  ++L+ EL+  G L
Sbjct: 66  SILKEIQHPNVITLHEVYE----NKTDVILILELVAGGEL 101

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 67.4 bits (165), Expect = 1e-13
 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 6/89 (6%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNI 168
           +   E +G G F  V++  +T TG+ +A  ++ + +    ++   + E  ++  L H N+
Sbjct: 91  VSKTEILGGGRFGQVHKCEETATGLKLA-AKIIKTR-GMKDKEEVKNEISVMNQLDHANL 148

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           +  Y  +E     +  IVLV E +  G L
Sbjct: 149 IQLYDAFE----SKNDIVLVMEYVDGGEL 173

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 66.9 bits (164), Expect = 1e-13
 Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 11/101 (10%)

Query: 103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL------NKAERARFREE 156
           +++R      + +G G+   V    + +T   VA   + ++K                 E
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65

Query: 157 AEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
            E+LK L HP I+    +++    +  Y  +V ELM  G L
Sbjct: 66  IEILKKLNHPCIIKIKNFFD---AEDYY--IVLELMEGGEL 101

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 67.4 bits (165), Expect = 1e-13
 Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 12/117 (10%)

Query: 84  VKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRG-LDTQTGVAVAWCELQE 142
             P    + + P  +++  E  R  LK E+++G G F  V+    +  T VAV       
Sbjct: 166 SVPCMSSKPQKP-WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM---- 220

Query: 143 KKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            K        F  EA ++K LQH  +V  +    V   +  YI  +TE M  G+L  
Sbjct: 221 -KPGSMSVEAFLAEANVMKTLQHDKLVKLHA---VVTKEPIYI--ITEFMAKGSLLD 271

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 66.9 bits (164), Expect = 1e-13
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 10/91 (10%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HP 166
               ++ +G GSF    + +  ++  A A      K ++K   A  ++E   LK  + HP
Sbjct: 12  LDLKDKPLGEGSFSICRKCVHKKSNQAFA-V----KIISKRMEANTQKEITALKLCEGHP 66

Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           NIV  +  +      + +  LV EL+  G L
Sbjct: 67  NIVKLHEVFH----DQLHTFLVMELLNGGEL 93

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 66.9 bits (164), Expect = 1e-13
 Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQH-P 166
           Y+   +E+GRG F  V + +   TG   A   L++++  +  RA    E  +L+  +  P
Sbjct: 30  YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCP 89

Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
            +++ +  +E        I+L+ E    G +
Sbjct: 90  RVINLHEVYE----NTSEIILILEYAAGGEI 116

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 66.5 bits (163), Expect = 2e-13
 Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 20/103 (19%)

Query: 106 RGYLKFEEEIGRGSFKTVYRGL----DTQTGVAVAWCELQEKKLNK----AERARFREEA 157
              +KF++ IG G+F  V +        +   A+       K++ +     +   F  E 
Sbjct: 24  WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAI-------KRMKEYASKDDHRDFAGEL 76

Query: 158 EMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           E+L  L  HPNI++  G        R Y+ L  E    G L  
Sbjct: 77  EVLCKLGHHPNIINLLG----ACEHRGYLYLAIEYAPHGNLLD 115

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 66.2 bits (162), Expect = 2e-13
 Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 5/86 (5%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSF 171
           E+IG G F +V++ +    G   A    ++      +      E      L QH ++V +
Sbjct: 17  EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76

Query: 172 YGYWEVTLTKRKYIVLVTELMTSGTL 197
           +  W     +  ++++  E    G+L
Sbjct: 77  FSAWA----EDDHMLIQNEYCNGGSL 98

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 41.2 bits (97), Expect = 9e-05
 Identities = 7/39 (17%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 15  TPEFMAPEMYEEH--YDESVDVYAFGMCMLEMSTSEYPY 51
              F+A E+ +E+  +    D++A  + ++  + +E   
Sbjct: 193 DSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLP 231

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 66.2 bits (162), Expect = 2e-13
 Identities = 25/107 (23%), Positives = 35/107 (32%), Gaps = 22/107 (20%)

Query: 106 RGYLKFEEEIGRGSFKTVYRGL-----DTQTGVAVAWCELQEKKLNK-----AERARFRE 155
           R  L   + +G G F +V  G       T   VAV       K +        E   F  
Sbjct: 33  RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAV-------KTMKLDNSSQREIEEFLS 85

Query: 156 EAEMLKGLQHPNIVSFYG---YWEVTLTKRKYIVLVTELMTSGTLKT 199
           EA  +K   HPN++   G           +  +  +   M  G L T
Sbjct: 86  EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV--ILPFMKYGDLHT 130

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 65.4 bits (160), Expect = 4e-13
 Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 11/112 (9%)

Query: 86  PQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL 145
            +     +  E   E  E+    +     +G+G++  VY G D    V +A  E+ E+  
Sbjct: 6   EEGDCESDLLEYDYEYDENGDRVV-----LGKGTYGIVYAGRDLSNQVRIAIKEIPERDS 60

Query: 146 NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
             ++     EE  + K L+H NIV + G    + ++  +I +  E +  G+L
Sbjct: 61  RYSQ--PLHEEIALHKHLKHKNIVQYLG----SFSENGFIKIFMEQVPGGSL 106

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 42.3 bits (100), Expect = 3e-05
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 3/49 (6%)

Query: 15  TPEFMAPE---MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
           T ++MAPE        Y ++ D+++ G  ++EM+T + P+ E   P   
Sbjct: 186 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA 234

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 65.7 bits (161), Expect = 4e-13
 Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 8/92 (8%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE----RARFREEAEMLKGLQH 165
              EE+G G F  V +  +  TG+  A   +++++   +     R     E  +L+ + H
Sbjct: 15  DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74

Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
            N+++ +  +E     R  +VL+ EL++ G L
Sbjct: 75  HNVITLHDVYE----NRTDVVLILELVSGGEL 102

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 65.3 bits (160), Expect = 4e-13
 Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 9/106 (8%)

Query: 96  EVKEEERESMRGYLKFEEEIGRGSFKTVYRGL---DTQTGVAVAWCELQEKKLNKAERAR 152
            ++          L+  E++G GSF  V RG     +   V+VA   L+   L++ E   
Sbjct: 7   PLQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD 66

Query: 153 -FREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
            F  E   +  L H N++  YG   V LT    +  VTEL   G+L
Sbjct: 67  DFIREVNAMHSLDHRNLIRLYG---VVLTPPMKM--VTELAPLGSL 107

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 65.8 bits (161), Expect = 4e-13
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 8/92 (8%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFRE----EAEMLKGLQH 165
              EE+G G F  V +  +  TG+  A   +++++   + R   RE    E  +L+ + H
Sbjct: 15  DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLH 74

Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           PNI++ +  +E     R  +VL+ EL++ G L
Sbjct: 75  PNIITLHDVYE----NRTDVVLILELVSGGEL 102

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 65.0 bits (159), Expect = 5e-13
 Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 12/107 (11%)

Query: 96  EVKEEERESMRGYLKFEE-EIGRGSFKTVYRGL----DTQTGVAVAWCELQEKKLNKAER 150
           E++ +E    R  L  E+ E+G G+F TV +G          VAV    L+ +  + A +
Sbjct: 5   EIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVK--ILKNEANDPALK 62

Query: 151 ARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
                EA +++ L +P IV   G   +   +   +  V E+   G L
Sbjct: 63  DELLAEANVMQQLDNPYIVRMIG---ICEAESWML--VMEMAELGPL 104

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 65.9 bits (160), Expect = 6e-13
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 7/92 (7%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           + +E +G G F  V R +   TG  VA+  C    ++L+   R R+  E +++K L HPN
Sbjct: 17  EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCR---QELSPKNRERWCLEIQIMKKLNHPN 73

Query: 168 IVSFYGYWE--VTLTKRKYIVLVTELMTSGTL 197
           +VS     +    L      +L  E    G L
Sbjct: 74  VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDL 105

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 38.9 bits (90), Expect = 7e-04
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
           T +++APE+ E + Y  +VD ++FG    E  T   P++    P Q + KV
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 236

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 65.0 bits (159), Expect = 6e-13
 Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 22/111 (19%)

Query: 97  VKEEERESMRGYLKFEEEIGRGSFKTVYRGL------DTQTGVAVAWCELQEKKLNKA-- 148
           +K   R      L+  + +G G F TV++G+        +  V +       K +     
Sbjct: 3   MKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCI-------KVIEDKSG 55

Query: 149 --ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
                   +    +  L H +IV   G   +       +  VT+ +  G+L
Sbjct: 56  RQSFQAVTDHMLAIGSLDHAHIVRLLG---LCPGSSLQL--VTQYLPLGSL 101

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 65.0 bits (159), Expect = 6e-13
 Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 12/96 (12%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVA-------WCELQEKKLNKAERARFREEAEMLKG 162
           + +E +GRG    V R +   T    A              +  +  R    +E ++L+ 
Sbjct: 20  EPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRK 79

Query: 163 L-QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           +  HPNI+     +E       +  LV +LM  G L
Sbjct: 80  VSGHPNIIQLKDTYE----TNTFFFLVFDLMKKGEL 111

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 65.6 bits (160), Expect = 6e-13
 Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 21/112 (18%)

Query: 97  VKEEERESMRGYLKFEEEIGRGSFKTVYRGL-----DTQTGVAVAWCELQEKKLNK---- 147
               + E  R  ++    IG G F  V++G+     +    VA+       K        
Sbjct: 380 PSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAI-------KTCKNCTSD 432

Query: 148 AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           + R +F +EA  ++   HP+IV   G   V      +I  + EL T G L++
Sbjct: 433 SVREKFLQEALTMRQFDHPHIVKLIG---VITENPVWI--IMELCTLGELRS 479

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 64.8 bits (158), Expect = 8e-13
 Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 8/127 (6%)

Query: 66  SVSITSAGPKVVFQPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYR 125
            +  T+A         S       +   S    E      R Y    ++IG G    V++
Sbjct: 16  GMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIY-SILKQIGSGGSSKVFQ 74

Query: 126 GLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN--IVSFYGYWEVTLTKRK 183
            L+ +     A   +  ++ +      +R E   L  LQ  +  I+  Y Y        +
Sbjct: 75  VLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI----TDQ 129

Query: 184 YIVLVTE 190
           YI +V E
Sbjct: 130 YIYMVME 136

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 64.7 bits (158), Expect = 9e-13
 Identities = 26/132 (19%), Positives = 45/132 (34%), Gaps = 25/132 (18%)

Query: 82  SGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL---------DTQTG 132
           +   P      E    ++ + E  R  L   + +G G F  V                  
Sbjct: 56  TADTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVT 115

Query: 133 VAVAWCELQEKKLNK----AERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVL 187
           VAV       K L       + +    E EM+K + +H NI++  G      T+   + +
Sbjct: 116 VAV-------KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLG----ACTQDGPLYV 164

Query: 188 VTELMTSGTLKT 199
           + E  + G L+ 
Sbjct: 165 IVEYASKGNLRE 176

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 64.2 bits (157), Expect = 1e-12
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 22/99 (22%)

Query: 109 LKFEEEIGRGSFKTVYRGL------DTQTGVAVAWCELQEKKLNK----AERARFREEAE 158
            K  + +G G+F TVY+GL        +  VA+       K+L +           +EA 
Sbjct: 17  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI-------KELREATSPKANKEILDEAY 69

Query: 159 MLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           ++  + +P++    G   + LT    +  +T+LM  G L
Sbjct: 70  VMASVDNPHVCRLLG---ICLTSTVQL--ITQLMPFGCL 103

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 63.8 bits (156), Expect = 2e-12
 Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 25/130 (19%)

Query: 84  VKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL---------DTQTGVA 134
             P      E    ++ + E  R  L   + +G G+F  V                  VA
Sbjct: 12  QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71

Query: 135 VAWCELQEKKLNK----AERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVT 189
           V       K L       + +    E EM+K + +H NI++  G      T+   + ++ 
Sbjct: 72  V-------KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLG----ACTQDGPLYVIV 120

Query: 190 ELMTSGTLKT 199
           E  + G L+ 
Sbjct: 121 EYASKGNLRE 130

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 63.4 bits (155), Expect = 2e-12
 Identities = 25/106 (23%), Positives = 39/106 (36%), Gaps = 22/106 (20%)

Query: 106 RGYLKFEEEIGRGSFKTVYRGL-------DTQTGVAVAWCELQEKKLNK----AERARFR 154
           R  LK  + +GRG+F  V            T   VAV       K L +    +E     
Sbjct: 26  RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV-------KMLKEGATHSEHRALM 78

Query: 155 EEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            E ++L  +  H N+V+  G           ++++ E    G L T
Sbjct: 79  SELKILIHIGHHLNVVNLLG---ACTKPGGPLMVIVEFCKFGNLST 121

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 63.5 bits (155), Expect = 2e-12
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 13/90 (14%)

Query: 112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA---ERARFREEAEMLKGLQ-HPN 167
           E+ +G G+   V   ++  T    A      K + K     R+R   E EML   Q H N
Sbjct: 18  EDVLGEGAHARVQTCINLITSQEYA-V----KIIEKQPGHIRSRVFREVEMLYQCQGHRN 72

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           ++    ++E    +     LV E M  G++
Sbjct: 73  VLELIEFFE----EEDRFYLVFEKMRGGSI 98

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 63.4 bits (155), Expect = 2e-12
 Identities = 28/106 (26%), Positives = 37/106 (34%), Gaps = 23/106 (21%)

Query: 106 RGYLKFEEEIGRGSFKTVYRGL-------DTQTGVAVAWCELQEKKLNK----AERARFR 154
           R  L F + +G G+F  V           D    VAV       K L       ER    
Sbjct: 22  RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAV-------KMLKPSAHLTEREALM 74

Query: 155 EEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            E ++L  L  H NIV+  G      T     +++TE    G L  
Sbjct: 75  SELKVLSYLGNHMNIVNLLGA----CTIGGPTLVITEYCCYGDLLN 116

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 63.5 bits (155), Expect = 2e-12
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 25/108 (23%)

Query: 106 RGYLKFEEEIGRGSFKTVYRGL---------DTQTGVAVAWCELQEKKLNK----AERAR 152
           R  L   + +G G+F  V             +  T VAV       K L       + + 
Sbjct: 68  RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV-------KMLKSDATEKDLSD 120

Query: 153 FREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
              E EM+K + +H NI++  G      T+   + ++ E  + G L+ 
Sbjct: 121 LISEMEMMKMIGKHKNIINLLG----ACTQDGPLYVIVEYASKGNLRE 164

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 63.6 bits (155), Expect = 2e-12
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 13/96 (13%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWC-------ELQEKKLNKAERARFREEAEMLKG 162
             ++ IGRG    V R +   TG   A         E    +  +  R   R E  +L+ 
Sbjct: 97  DPKDVIGRGVSSVVRRCVHRATGHEFA-VKIMEVTAERLSPEQLEEVREATRRETHILRQ 155

Query: 163 L-QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           +  HP+I++    +E       ++ LV +LM  G L
Sbjct: 156 VAGHPHIITLIDSYE----SSSFMFLVFDLMRKGEL 187

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 63.4 bits (155), Expect = 2e-12
 Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 24/138 (17%)

Query: 75  KVVFQPISGVKPQSFERVESPEVKEEER-ESMRGYLKFEEEIGRGSFKTVYRGL------ 127
           +V ++ I   +  S+  ++  ++   E+ E  R  L+F + +G G+F  V          
Sbjct: 13  QVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGK 72

Query: 128 -DTQTGVAVAWCELQEKKLNK----AERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTK 181
            D    VAV       K L       E+     E +++  L QH NIV+  G      T 
Sbjct: 73  EDAVLKVAV-------KMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG----ACTH 121

Query: 182 RKYIVLVTELMTSGTLKT 199
              ++++TE    G L  
Sbjct: 122 GGPVLVITEYCCYGDLLN 139

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 63.1 bits (154), Expect = 3e-12
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 4/97 (4%)

Query: 101 ERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEML 160
           + +   G  +  + IG+G+F  V       TG  VA   + + +LN     +   E  ++
Sbjct: 9   DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIM 68

Query: 161 KGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           K L HPNIV  +   EV  T++  + L+ E  + G +
Sbjct: 69  KILNHPNIVKLF---EVIETEKT-LYLIMEYASGGEV 101

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 63.1 bits (154), Expect = 3e-12
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 11/99 (11%)

Query: 110 KFE--EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
            FE  + +GRG F  V+   +       A   ++        R +   E + L  L+HP 
Sbjct: 6   DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL-AREKVMREVKALAKLEHPG 64

Query: 168 IVSFYGYWE--------VTLTKRKYIVLVTELMTSGTLK 198
           IV ++  W            + + Y+ +  +L     LK
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLK 103

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 41.2 bits (97), Expect = 8e-05
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 4/56 (7%)

Query: 15  TPEFMAPEMYEE-HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI 69
           T  +M+PE      Y   VD+++ G+ + E+       ME     +    V ++  
Sbjct: 193 TKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQME---RVRTLTDVRNLKF 245

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 62.7 bits (153), Expect = 4e-12
 Identities = 28/106 (26%), Positives = 38/106 (35%), Gaps = 23/106 (21%)

Query: 106 RGYLKFEEEIGRGSFKTVYRGL-------DTQTGVAVAWCELQEKKLNK----AERARFR 154
           R  L+F + +G G+F  V                VAV       K L +    +ER    
Sbjct: 44  RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAV-------KMLKEKADSSEREALM 96

Query: 155 EEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            E +M+  L  H NIV+  G      T    I L+ E    G L  
Sbjct: 97  SELKMMTQLGSHENIVNLLGA----CTLSGPIYLIFEYCCYGDLLN 138

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 61.7 bits (150), Expect = 7e-12
 Identities = 14/89 (15%), Positives = 24/89 (26%), Gaps = 5/89 (5%)

Query: 112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQ-EKKLNKAERARFREEAEMLKGLQHPNIVS 170
               G       ++ LDT     VA   +  +  L              L  +  P +  
Sbjct: 36  LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVAR 95

Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
                 V       +V   E +  G+L+ 
Sbjct: 96  VLDV--VHTRAGGLVVA--EWIRGGSLQE 120

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 61.9 bits (151), Expect = 7e-12
 Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 8/131 (6%)

Query: 70  TSAGPKVVFQPISGVKPQSFERVESPEVKEEERESMRGYLKFE--EEIGRGSFKTVYRGL 127
             A P     P             + E+ E   +      ++     +G+G F   +   
Sbjct: 3   APADPGKAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRR-RYVRGRFLGKGGFAKCFEIS 61

Query: 128 DTQTGVAVAWCELQEKKLNKAE-RARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV 186
           D  T    A   + +  L K   R +   E  + + L H ++V F+G++E       ++ 
Sbjct: 62  DADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE----DNDFVF 117

Query: 187 LVTELMTSGTL 197
           +V EL    +L
Sbjct: 118 VVLELCRRRSL 128

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 61.6 bits (150), Expect = 1e-11
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 8/108 (7%)

Query: 86  PQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL 145
               +        +      R Y    ++IG G    V++ L+ +     A   +  ++ 
Sbjct: 8   SSGVDLGTENLYFQSMSVKGRIY-SILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEA 65

Query: 146 NKAERARFREEAEMLKGLQHPN--IVSFYGYWEVTLTKRKYIVLVTEL 191
           +      +R E   L  LQ  +  I+  Y Y        +YI +V E 
Sbjct: 66  DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI----TDQYIYMVMEC 109

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 61.0 bits (149), Expect = 1e-11
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE-RARFREEAEMLKGLQHPNIVSFYG 173
           +G+GSF  VYR     TG+ VA   + +K + KA    R + E ++   L+HP+I+  Y 
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78

Query: 174 YWEVTLTKRKYIVLVTELMTSGTL 197
           Y+E       Y+ LV E+  +G +
Sbjct: 79  YFE----DSNYVYLVLEMCHNGEM 98

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 61.3 bits (149), Expect = 2e-11
 Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 16/111 (14%)

Query: 91  RVESPEVKEEERESMRGYLKFE--EEIGRGSFKT-VYRGLDTQTGVAVAWCELQEKKLNK 147
            +E  +  EE    + G + F   + +G G+  T VYRG+     VAV       K++  
Sbjct: 6   SLEQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAV-------KRILP 58

Query: 148 AERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
              +    E ++L+   +HPN++ ++   +     R++  +  EL    TL
Sbjct: 59  ECFSFADREVQLLRESDEHPNVIRYFCTEK----DRQFQYIAIELCA-ATL 104

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 60.9 bits (148), Expect = 2e-11
 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 7/81 (8%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN--IVS 170
           ++IG G    V++ L+ +     A   +  ++ +      +R E   L  LQ  +  I+ 
Sbjct: 15  KQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 73

Query: 171 FYGYWEVTLTKRKYIVLVTEL 191
            Y Y        +YI +V E 
Sbjct: 74  LYDYEI----TDQYIYMVMEC 90

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 60.7 bits (148), Expect = 2e-11
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 19/95 (20%)

Query: 111 FEEE--IGRGSFKTVYRG-LDTQTGVAVAWCELQEKKLNKAERARFRE---EAEMLKGLQ 164
           F+ +  IG G F  VY+G L     VA+       K+          E   E E L   +
Sbjct: 41  FDHKFLIGHGVFGKVYKGVLRDGAKVAL-------KRRTPESSQGIEEFETEIETLSFCR 93

Query: 165 HPNIVSFYGY-WEVTLTKRKYIVLVTELMTSGTLK 198
           HP++VS  G+  E     R  ++L+ + M +G LK
Sbjct: 94  HPHLVSLIGFCDE-----RNEMILIYKYMENGNLK 123

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 60.6 bits (147), Expect = 2e-11
 Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 29/127 (22%)

Query: 90  ERVESPEVKEEERESMRGYLKFE--------------EEIGRGSFKTVYRGLDTQTGVAV 135
           +++E  E+ E++R+ +  +L  +               E+G G+   V++     +G+ +
Sbjct: 2   KKLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVM 61

Query: 136 AWCELQEKK-----LNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTE 190
           A      +K     +  A R +   E ++L     P IV FYG           I +  E
Sbjct: 62  A------RKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG----AFYSDGEISICME 111

Query: 191 LMTSGTL 197
            M  G+L
Sbjct: 112 HMDGGSL 118

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 44.5 bits (105), Expect = 8e-06
 Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 1/84 (1%)

Query: 15  TPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAG 73
           T  +M+PE +   HY    D+++ G+ ++EM+   YP                V   +A 
Sbjct: 193 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 252

Query: 74  PKVVFQPISGVKPQSFERVESPEV 97
                +       +       P  
Sbjct: 253 TPPRPRTPGRPLNKFGMDSRPPMA 276

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 60.4 bits (147), Expect = 2e-11
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 22/99 (22%)

Query: 109 LKFEEEIGRGSFKTVYRGL------DTQTGVAVAWCELQEKKLNK----AERARFREEAE 158
            K  + +G G+F TVY+GL        +  VA+       K+L +           +EA 
Sbjct: 17  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI-------KELREATSPKANKEILDEAY 69

Query: 159 MLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           ++  + +P++    G   + LT    +  +T+LM  G L
Sbjct: 70  VMASVDNPHVCRLLG---ICLTSTVQL--ITQLMPFGCL 103

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 60.3 bits (146), Expect = 4e-11
 Identities = 29/132 (21%), Positives = 48/132 (36%), Gaps = 20/132 (15%)

Query: 74  PKVVFQPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL----DT 129
            K    P+     +S          ++        L  + E+G G+F +V +G+      
Sbjct: 303 DKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKK 362

Query: 130 QTGVAVAWCELQEKKL----NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI 185
           Q  VA+       K L     KA+      EA+++  L +P IV   G   V   +   +
Sbjct: 363 QIDVAI-------KVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG---VCQAEALML 412

Query: 186 VLVTELMTSGTL 197
             V E+   G L
Sbjct: 413 --VMEMAGGGPL 422

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 59.5 bits (145), Expect = 4e-11
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE-RARFREEAEMLKGLQHPNIVSFYG 173
           +G+G F   +   D  T    A   + +  L K   R +   E  + + L H ++V F+G
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82

Query: 174 YWEVTLTKRK-YIVLVTELMTSGTL 197
           ++E        ++VL  EL    +L
Sbjct: 83  FFE---DNDFVFVVL--ELCRRRSL 102

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 59.7 bits (145), Expect = 5e-11
 Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 9/104 (8%)

Query: 91  RVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAER 150
            V +   +  +R     Y    + IG GSF  VY+     +G  VA      KK+ + +R
Sbjct: 39  TVVATPGQGPDRPQEVSY-TDTKVIGNGSFGVVYQAKLCDSGELVAI-----KKVLQDKR 92

Query: 151 ARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK--YIVLVTELM 192
            + R E ++++ L H NIV    ++  +  K+   Y+ LV + +
Sbjct: 93  FKNR-ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 135

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 59.2 bits (144), Expect = 6e-11
 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 20/94 (21%)

Query: 112 EEEIGRGSFKTVYRGL----DTQTGVAVAWCELQEKKL----NKAERARFREEAEMLKGL 163
           + E+G G+F +V +G+      Q  VA+       K L     KA+      EA+++  L
Sbjct: 15  DIELGCGNFGSVRQGVYRMRKKQIDVAI-------KVLKQGTEKADTEEMMREAQIMHQL 67

Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
            +P IV   G   V   +   +  V E+   G L
Sbjct: 68  DNPYIVRLIG---VCQAEALML--VMEMAGGGPL 96

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 59.1 bits (143), Expect = 9e-11
 Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 19/97 (19%)

Query: 112 EEEIGRGSFKTVYRGLDTQTG---VAVAWCELQEKKLNKAE----RARFREEAEMLKGLQ 164
           +  I  G    +Y  LD       V +       K L  +     +A    E + L  + 
Sbjct: 85  KGCIAHGGLGWIYLALDRNVNGRPVVL-------KGLVHSGDAEAQAMAMAERQFLAEVV 137

Query: 165 HPNIVSFYGYWE---VTLTKRKYIVLVTELMTSGTLK 198
           HP+IV  + + E          YIV+  E +   +LK
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVM--EYVGGQSLK 172

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 58.1 bits (141), Expect = 2e-10
 Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 18/97 (18%)

Query: 113 EEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVS 170
           E+IG+GSF  V++G+D +T   VA+   +L+E +    +    ++E  +L     P +  
Sbjct: 28  EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIED---IQQEITVLSQCDSPYVTK 84

Query: 171 FYG--YWEVTLTKRKYIVL-------VTELMTSGTLK 198
           +YG    +  L    +I++         +L+  G L 
Sbjct: 85  YYGSYLKDTKL----WIIMEYLGGGSALDLLEPGPLD 117

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 15  TPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPYME 53
           TP +MAPE + +  YD   D+++ G+  +E++  E P+ E
Sbjct: 182 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 221

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 57.7 bits (140), Expect = 3e-10
 Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 11/99 (11%)

Query: 99  EEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAE 158
           E  R+ M  + + E   G+G+F TV  G +  TG++VA      KK+ +  R R RE   
Sbjct: 16  ERSRKEMDRF-QVERMAGQGTFGTVQLGKEKSTGMSVAI-----KKVIQDPRFRNRELQI 69

Query: 159 M--LKGLQHPNIVSFYGYWEVTLTKRK---YIVLVTELM 192
           M  L  L HPNIV    Y+     + +   Y+ +V E +
Sbjct: 70  MQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV 108

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 57.1 bits (138), Expect = 4e-10
 Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 14/97 (14%)

Query: 103 ESMRGYLKFEEEIGRGSFKTV-YRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLK 161
           +S++  +  E+ +G GS  TV ++G      VAV       K++          E ++L 
Sbjct: 11  QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAV-------KRMLIDFCDIALMEIKLLT 63

Query: 162 GL-QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
               HPN++ +Y          +++ +  EL     L
Sbjct: 64  ESDDHPNVIRYYCSET----TDRFLYIALELCN-LNL 95

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 57.0 bits (138), Expect = 4e-10
 Identities = 13/133 (9%), Positives = 45/133 (33%), Gaps = 19/133 (14%)

Query: 80  PISGVKP--QSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAV-- 135
           P+  +K    ++  +       +E++      +    + +G F  +          A+  
Sbjct: 2   PLGSMKDILSNYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKK 61

Query: 136 -----------AWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY 184
                            +K   K++   F+ E +++  +++   ++  G         + 
Sbjct: 62  YEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIIT---NYDE- 117

Query: 185 IVLVTELMTSGTL 197
           + ++ E M + ++
Sbjct: 118 VYIIYEYMENDSI 130

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 56.9 bits (138), Expect = 4e-10
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 17/96 (17%)

Query: 112 EEEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKAE-------RARFREEAEMLKG 162
            E +G G    V+   D +    VAV        K+ +A+         RFR EA+    
Sbjct: 17  GEILGFGGMSEVHLARDLRDHRDVAV--------KVLRADLARDPSFYLRFRREAQNAAA 68

Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           L HP IV+ Y   E          +V E +   TL+
Sbjct: 69  LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLR 104

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 56.1 bits (136), Expect = 6e-10
 Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 5/100 (5%)

Query: 99  EEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE-RARFREEA 157
           + +     G+    + +G G+F  V  G    TG  VA   L  +K+   +   + + E 
Sbjct: 3   KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREI 62

Query: 158 EMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           + LK  +HP+I+  Y   +V  T      +V E ++ G L
Sbjct: 63  QNLKLFRHPHIIKLY---QVISTPTD-FFMVMEYVSGGEL 98

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 56.2 bits (136), Expect = 6e-10
 Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           + +E IG G+   V           VA+    L++ + +  E     +E + +    HPN
Sbjct: 18  ELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDE---LLKEIQAMSQCHHPN 74

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           IVS+Y     +   +  + LV +L++ G++
Sbjct: 75  IVSYYT----SFVVKDELWLVMKLLSGGSV 100

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 42.3 bits (100), Expect = 3e-05
 Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)

Query: 15  TPEFMAPEMYEEH--YDESVDVYAFGMCMLEMSTSEYPYME 53
           TP +MAPE+ E+   YD   D+++FG+  +E++T   PY +
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 56.0 bits (136), Expect = 8e-10
 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 16/100 (16%)

Query: 100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERAR------- 152
           + +   + Y K  + +G G F TVY+  D  T   VA   +++ KL     A+       
Sbjct: 4   DVKSRAKRYEK-LDFLGEGQFATVYKARDKNTNQIVA---IKKIKLGHRSEAKDGINRTA 59

Query: 153 FREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELM 192
            R E ++L+ L HPNI+      +    K   I LV + M
Sbjct: 60  LR-EIKLLQELSHPNIIGLL---DAFGHKSN-ISLVFDFM 94

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 56.1 bits (136), Expect = 8e-10
 Identities = 23/97 (23%), Positives = 35/97 (36%), Gaps = 21/97 (21%)

Query: 112 EEEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKAE-------RARFREEAEMLKG 162
              +GRG    VY   DT     VA+        KL           R R + EA     
Sbjct: 39  RRLVGRGGMGDVYEAEDTVRERIVAL--------KLMSETLSSDPVFRTRMQREARTAGR 90

Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           LQ P++V  + + E+    + Y+ +   L+    L  
Sbjct: 91  LQEPHVVPIHDFGEI--DGQLYVDM--RLINGVDLAA 123

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 56.3 bits (136), Expect = 9e-10
 Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 98  KEEERESMR-GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE-RARFRE 155
           K++    ++ G+    + +G G+F  V  G    TG  VA   L  +K+   +   + R 
Sbjct: 6   KQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRR 65

Query: 156 EAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           E + LK  +HP+I+  Y   +V  T    I +V E ++ G L
Sbjct: 66  EIQNLKLFRHPHIIKLY---QVISTPSD-IFMVMEYVSGGEL 103

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 56.2 bits (136), Expect = 9e-10
 Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 19/129 (14%)

Query: 73  GPKVVFQPISGVK------PQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRG 126
              +   P++GVK      P    +V + + K  E+  +  Y    + IG GSF  V++ 
Sbjct: 2   SFTMSNAPLNGVKLNPLDDPNKVIKVLASDGKTGEQREIA-YTN-CKVIGNGSFGVVFQA 59

Query: 127 LDTQTG-VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR--K 183
              ++  VA+       KK+ + +R + R E ++++ ++HPN+V    ++     K+   
Sbjct: 60  KLVESDEVAI-------KKVLQDKRFKNR-ELQIMRIVKHPNVVDLKAFFYSNGDKKDEV 111

Query: 184 YIVLVTELM 192
           ++ LV E +
Sbjct: 112 FLNLVLEYV 120

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 55.8 bits (135), Expect = 1e-09
 Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 11/131 (8%)

Query: 68  SITSAGPKVVFQPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL 127
           S    G + ++     V  + F+      V + +    R  L    +IG GS   V    
Sbjct: 9   SGVDLGTENLYFQSGVVTHEQFKAALRMVVDQGD---PRLLLDSYVKIGEGSTGIVCLAR 65

Query: 128 DTQTGVAVAWCELQEKKLNKAER-ARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV 186
           +  +G  VA   ++   L K +R      E  +++  QH N+V  Y     +    + + 
Sbjct: 66  EKHSGRQVA---VKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYK----SYLVGEELW 118

Query: 187 LVTELMTSGTL 197
           ++ E +  G L
Sbjct: 119 VLMEFLQGGAL 129

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 38.9 bits (91), Expect = 5e-04
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 15  TPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPYME 53
           TP +MAPE +    Y   VD+++ G+ ++EM   E PY  
Sbjct: 204 TPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS 243

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 55.9 bits (135), Expect = 1e-09
 Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 11/116 (9%)

Query: 86  PQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL 145
            +  + VE   +   E E  + Y      +G G+F  V+  +D +    V    ++++K+
Sbjct: 4   EEPPKAVELEGLAACEGEYSQKY-STMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKV 62

Query: 146 ------NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSG 195
                    +  +   E  +L  ++H NI+      ++   +  +  LV E   SG
Sbjct: 63  LEDCWIEDPKLGKVTLEIAILSRVEHANIIKVL---DIFENQ-GFFQLVMEKHGSG 114

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 55.4 bits (134), Expect = 1e-09
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 10/87 (11%)

Query: 113 EEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVS 170
            E+G G+F  VY+  + +TG   A    E + ++    E   +  E E+L    HP IV 
Sbjct: 25  GELGDGAFGKVYKAKNKETGALAAAKVIETKSEE----ELEDYIVEIEILATCDHPYIVK 80

Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
             G           + ++ E    G +
Sbjct: 81  LLG----AYYHDGKLWIMIEFCPGGAV 103

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 38.5 bits (90), Expect = 7e-04
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 6/45 (13%)

Query: 15  TPEFMAPE------MYEEHYDESVDVYAFGMCMLEMSTSEYPYME 53
           TP +MAPE      M +  YD   D+++ G+ ++EM+  E P+ E
Sbjct: 180 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 224

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 55.3 bits (134), Expect = 1e-09
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE-RARFREEAEMLKGLQHPNIVSFYG 173
           +G+G F  VY   + Q+   +A   L + +L KA    + R E E+   L+HPNI+  YG
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76

Query: 174 YWEVTLTKRKYIVLVTELMTSGTL 197
           Y+         + L+ E    GT+
Sbjct: 77  YFH----DATRVYLILEYAPLGTV 96

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
           T +++ PEM E   +DE VD+++ G+   E    + P+ E     + YK++  V  T
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 225

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 55.4 bits (133), Expect = 1e-09
 Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 8/114 (7%)

Query: 87  QSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCEL---QEK 143
           +   ++ + + K E +   +        +G G+F  VY         A    +     +K
Sbjct: 46  EWQCKLPAIKPKTEFQLGSKLV-YVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQK 104

Query: 144 KLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
             N  E     +  E LK       + FY         +   VLV EL + GTL
Sbjct: 105 PANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF----QNGSVLVGELYSYGTL 154

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 45.0 bits (106), Expect = 6e-06
 Identities = 10/97 (10%), Positives = 27/97 (27%), Gaps = 6/97 (6%)

Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAG 73
           T  F   EM   + ++  +D +     +  M    Y  ++  G     + +         
Sbjct: 248 TSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLDM 307

Query: 74  PKVVFQPISGVKPQSFERVESPEVKEEERESMRGYLK 110
               F  +  +              +  R+ ++   +
Sbjct: 308 WNEFFHVMLNIPDCH-----HLPSLDLLRQKLKKVFQ 339

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 55.1 bits (132), Expect = 2e-09
 Identities = 14/97 (14%), Positives = 26/97 (26%), Gaps = 2/97 (2%)

Query: 79  QPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAW- 137
             +  V    + +     V     +  R  LK  E +  G    V+   D +     A  
Sbjct: 35  AMVEAVTATVWPQNAETTVDSLLSQGER-KLKLVEPLRVGDRSVVFLVRDVERLEDFALK 93

Query: 138 CELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGY 174
                 + +++E  R  E       L   +       
Sbjct: 94  VFTMGAENSRSELERLHEATFAAARLLGESPEEARDR 130

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 55.1 bits (133), Expect = 2e-09
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 113 EEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVS 170
            EIG GSF  VY   D +    VA+       K+ +  +     +E   L+ L+HPN + 
Sbjct: 60  REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQ 118

Query: 171 FYG 173
           + G
Sbjct: 119 YRG 121

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 55.1 bits (133), Expect = 2e-09
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 6/91 (6%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEML-KGLQHPN 167
           L+   E+G G+   V++    +TG  +A  +++ +  NK E  R   + +++ K    P 
Sbjct: 27  LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMR-RSGNKEENKRILMDLDVVLKSHDCPY 85

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           IV  +G    T      + +  ELM +   K
Sbjct: 86  IVQCFG----TFITNTDVFIAMELMGTCAEK 112

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 41.6 bits (98), Expect = 6e-05
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 6/57 (10%)

Query: 15  TPEFMAPE------MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV 65
              +MAPE        +  YD   DV++ G+ ++E++T ++PY  C    ++  KV+
Sbjct: 187 CAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVL 243

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 55.1 bits (133), Expect = 2e-09
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 11/93 (11%)

Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE--RARFREEAEMLKGLQ 164
               F ++IG G+F       D  T   VA      K + +        + E    + L+
Sbjct: 20  DRYDFVKDIGSGNFGVARLMRDKLTKELVAV-----KYIERGAAIDENVQREIINHRSLR 74

Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           HPNIV F    EV LT    + ++ E  + G L
Sbjct: 75  HPNIVRFK---EVILTPTH-LAIIMEYASGGEL 103

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 54.9 bits (132), Expect = 2e-09
 Identities = 21/95 (22%), Positives = 31/95 (32%), Gaps = 16/95 (16%)

Query: 110 KFEEEIGRG--SFKTVYRGLDTQTGVAVAWCELQEKKLN--KAERARFRE---EAEMLKG 162
           +    IG+G     TV       TG  V       +++N              E  + K 
Sbjct: 28  ELLTVIGKGFEDLMTVNLARYKPTGEYVTV-----RRINLEACSNEMVTFLQGELHVSKL 82

Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
             HPNIV +      T      + +VT  M  G+ 
Sbjct: 83  FNHPNIVPYRA----TFIADNELWVVTSFMAYGSA 113

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 41.4 bits (97), Expect = 8e-05
 Identities = 9/42 (21%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 15  TPEFMAPEMYEEH---YDESVDVYAFGMCMLEMSTSEYPYME 53
              +++PE+ +++   YD   D+Y+ G+   E++    P+ +
Sbjct: 198 VLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 239

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 54.7 bits (132), Expect = 2e-09
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 6/88 (6%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSF 171
           E +G G++  VY+G   +TG   A   ++   +   E    ++E  MLK    H NI ++
Sbjct: 30  ELVGNGTYGQVYKGRHVKTGQLAA---IKVMDVTGDEEEEIKQEINMLKKYSHHRNIATY 86

Query: 172 YG--YWEVTLTKRKYIVLVTELMTSGTL 197
           YG    +        + LV E   +G++
Sbjct: 87  YGAFIKKNPPGMDDQLWLVMEFCGAGSV 114

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 54.2 bits (131), Expect = 3e-09
 Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 8/86 (9%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERAR-FREEAEMLKGLQHPNIVSF 171
           E+IG+G+  TVY  +D  TG  VA   +++  L +  +      E  +++  ++PNIV++
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELIINEILVMRENKNPNIVNY 82

Query: 172 YGYWEVTLTKRKYIVLVTELMTSGTL 197
                 +      + +V E +  G+L
Sbjct: 83  LD----SYLVGDELWVVMEYLAGGSL 104

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 39.2 bits (92), Expect = 4e-04
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 15  TPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPYME 53
           TP +MAPE +  + Y   VD+++ G+  +EM   E PY+ 
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 54.1 bits (131), Expect = 3e-09
 Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 5/91 (5%)

Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHP 166
                 + +G G++  V   ++  T  AVA   +  K+         ++E  + K L H 
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHE 65

Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           N+V FY              L  E  + G L
Sbjct: 66  NVVKFY---GHRREGNI-QYLFLEYCSGGEL 92

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 54.3 bits (131), Expect = 3e-09
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 16/96 (16%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK-----LNKAERAR-FREEAEMLKG 162
           LK   EIGRG++ +V + +   +G  +A       K     +++ E+ +   +   +++ 
Sbjct: 24  LKDLGEIGRGAYGSVNKMVHKPSGQIMA------VKRIRSTVDEKEQKQLLMDLDVVMRS 77

Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
              P IV FYG     L +     +  ELM++   K
Sbjct: 78  SDCPYIVQFYG----ALFREGDCWICMELMSTSFDK 109

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 15  TPEFMAPE-----MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV 65
              +MAPE        + YD   DV++ G+ + E++T  +PY +         +VV
Sbjct: 188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV 243

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 54.1 bits (131), Expect = 4e-09
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 20/96 (20%)

Query: 104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE-------RARFREE 156
           S   + +  E++G G++ TVY+GL+  TGV VA   L+E KL+  E       R     E
Sbjct: 3   SSSQFKQ-LEKLGNGTYATVYKGLNKTTGVYVA---LKEVKLDSEEGTPSTAIR-----E 53

Query: 157 AEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELM 192
             ++K L+H NIV  Y   +V  T+ K + LV E M
Sbjct: 54  ISLMKELKHENIVRLY---DVIHTENK-LTLVFEFM 85

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 53.9 bits (130), Expect = 4e-09
 Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 5/91 (5%)

Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHP 166
                 + +G G++  V   ++  T  AVA   +  K+         ++E  + K L H 
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHE 65

Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           N+V FY              L  E  + G L
Sbjct: 66  NVVKFY---GHRREGNI-QYLFLEYCSGGEL 92

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 53.5 bits (129), Expect = 5e-09
 Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 14/125 (11%)

Query: 79  QPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWC 138
           +P+ G  P +     +P    ++RE+     +    +G+G F TV+ G      + VA  
Sbjct: 5   KPLQG--PPAPPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIK 62

Query: 139 ELQEKKLNKAERAR-----FREEAEMLK---GLQHPNIVSFYGYWEVTLTKRKYIVLVTE 190
            +   ++              E A + K   G  HP ++      +   T+  ++ LV E
Sbjct: 63  VIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL---DWFETQEGFM-LVLE 118

Query: 191 LMTSG 195
                
Sbjct: 119 RPLPA 123

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 53.4 bits (129), Expect = 6e-09
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 5/84 (5%)

Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE-RARFREEAEMLKGLQHPNIVSFYG 173
           +G+G F  VY   + Q    +A   L + +L K     + R E E+   L+HPNI+  Y 
Sbjct: 22  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81

Query: 174 YWEVTLTKRKYIVLVTELMTSGTL 197
           Y+     +++ I L+ E    G L
Sbjct: 82  YFH---DRKR-IYLMLEFAPRGEL 101

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 39.1 bits (92), Expect = 4e-04
 Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
           T +++ PEM E   +DE VD++  G+   E      P+ +     + ++++V+V + 
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF-DSPSHTETHRRIVNVDLK 230

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 53.0 bits (128), Expect = 7e-09
 Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 16/90 (17%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK-----LNKAERARFREEAEM-LKG 162
           L+   E+GRG++  V +     +G  +A       K     +N  E+ R   + ++ ++ 
Sbjct: 9   LEPIMELGRGAYGVVEKMRHVPSGQIMA------VKRIRATVNSQEQKRLLMDLDISMRT 62

Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELM 192
           +  P  V+FYG     L +   + +  ELM
Sbjct: 63  VDCPFTVTFYG----ALFREGDVWICMELM 88

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 5/56 (8%)

Query: 15  TPEFMAPE-----MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV 65
              +MAPE     + ++ Y    D+++ G+ M+E++   +PY     P Q  K+VV
Sbjct: 172 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 227

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 53.4 bits (128), Expect = 8e-09
 Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 8/99 (8%)

Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK----AERARFREEAEMLK 161
           R  LK  + +GRG+F  V                +  K L +    +E      E ++L 
Sbjct: 21  RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 80

Query: 162 GL-QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            +  H N+V+  G           ++++ E    G L T
Sbjct: 81  HIGHHLNVVNLLG---ACTKPGGPLMVIVEFCKFGNLST 116

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 53.0 bits (128), Expect = 8e-09
 Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 6/92 (6%)

Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAER--ARFREEAEMLKGLQ 164
           G     + +G GS+  V   LD++T    A   L++KKL +     A  ++E ++L+ L+
Sbjct: 5   GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR 64

Query: 165 HPNIVSFYGYWEVTLTK-RKYIVLVTELMTSG 195
           H N++      +V   + ++ + +V E    G
Sbjct: 65  HKNVIQLV---DVLYNEEKQKMYMVMEYCVCG 93

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 53.0 bits (128), Expect = 8e-09
 Identities = 25/96 (26%), Positives = 32/96 (33%), Gaps = 21/96 (21%)

Query: 112 EEEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKAE-------RARFREEAEMLKG 162
            +++G G   TVY   DT     VA+        K              RF  E      
Sbjct: 16  VDKLGGGGMSTVYLAEDTILNIKVAI--------KAIFIPPREKEETLKRFEREVHNSSQ 67

Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           L H NIVS     E       Y+V+  E +   TL 
Sbjct: 68  LSHQNIVSMIDVDEE--DDCYYLVM--EYIEGPTLS 99

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 52.9 bits (128), Expect = 1e-08
 Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 21/96 (21%)

Query: 105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE--------RARFREE 156
           M+ Y K  E+IG G++ TV++  + +T   VA   L+  +L+  +        R     E
Sbjct: 1   MQKYEK-LEKIGEGTYGTVFKAKNRETHEIVA---LKRVRLDDDDEGVPSSALR-----E 51

Query: 157 AEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELM 192
             +LK L+H NIV  +   +V  + +K + LV E  
Sbjct: 52  ICLLKELKHKNIVRLH---DVLHSDKK-LTLVFEFC 83

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 31/103 (30%)

Query: 103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAE---- 158
           +SM  Y      +G GS+  V +  +  TG  VA      KK        F E  +    
Sbjct: 22  QSMEKYENLGL-VGEGSYGMVMKCRNKDTGRIVAI-----KK--------FLESDDDKMV 67

Query: 159 ---------MLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELM 192
                    +LK L+H N+V+     EV   K++   LV E +
Sbjct: 68  KKIAMREIKLLKQLRHENLVNLL---EVCKKKKR-WYLVFEFV 106

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 52.7 bits (127), Expect = 1e-08
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 5/92 (5%)

Query: 100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE-RARFREEAE 158
              +   G     E +G GSF  V      +T   VA   +  + L K++   R   E  
Sbjct: 2   AISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREIS 61

Query: 159 MLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTE 190
            LK L+HP+I+  Y   +V  T    IV+V E
Sbjct: 62  YLKLLRHPHIIKLY---DVITTPTD-IVMVIE 89

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 52.5 bits (127), Expect = 1e-08
 Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 21/96 (21%)

Query: 105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE--------RARFREE 156
           M  + K  E+IG G++  VY+  +  TG  VA   L++ +L+           R     E
Sbjct: 2   MENFQK-VEKIGEGTYGVVYKARNKLTGEVVA---LKKIRLDTETEGVPSTAIR-----E 52

Query: 157 AEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELM 192
             +LK L HPNIV      +V  T+ K + LV E +
Sbjct: 53  ISLLKELNHPNIVKLL---DVIHTENK-LYLVFEFL 84

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 17/122 (13%), Positives = 42/122 (34%), Gaps = 10/122 (8%)

Query: 80  PISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCE 139
           P         +   +     +E+E +    +    +G G F +VY G+     + VA   
Sbjct: 16  PRGSHMAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH 75

Query: 140 LQEKKLNKAERARFRE----EAEMLKGLQH--PNIVSFYGYWEVTLTKRKYIVLVTELMT 193
           +++ +++             E  +LK +      ++    ++E       ++ L+ E   
Sbjct: 76  VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE---RPDSFV-LILERPE 131

Query: 194 SG 195
             
Sbjct: 132 PV 133

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 21/97 (21%)

Query: 104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE--------RARFRE 155
           S+  Y +  + +G G++  VY+ +DT T   VA   ++  +L   E        R     
Sbjct: 32  SIDRYRRITK-LGEGTYGEVYKAIDTVTNETVA---IKRIRLEHEEEGVPGTAIR----- 82

Query: 156 EAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELM 192
           E  +LK LQH NI+       V     + + L+ E  
Sbjct: 83  EVSLLKELQHRNIIELK---SVIHHNHR-LHLIFEYA 115

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 52.1 bits (125), Expect = 2e-08
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNI 168
           L+    +  G F  VY   D  +G   A   L   +  K      +E   M K   HPNI
Sbjct: 30  LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAII-QEVCFMKKLSGHPNI 88

Query: 169 VSFYGYW----EVTLTKRKYIVLVTEL 191
           V F        E + T +   +L+TEL
Sbjct: 89  VQFCSAASIGKEESDTGQAEFLLLTEL 115

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 31/101 (30%)

Query: 105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAE------ 158
           M  Y K  + IG GS+  V++  +  TG  VA      KK        F E  +      
Sbjct: 2   MEKYEKIGK-IGEGSYGVVFKCRNRDTGQIVAI-----KK--------FLESEDDPVIKK 47

Query: 159 -------MLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELM 192
                  MLK L+HPN+V+     EV   KR+ + LV E  
Sbjct: 48  IALREIRMLKQLKHPNLVNLL---EVFRRKRR-LHLVFEYC 84

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 51.6 bits (124), Expect = 3e-08
 Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 10/87 (11%)

Query: 112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERAR-FREEAEMLKGLQHPNIVS 170
            E++G GS+ +VY+ +  +TG  VA      K++      +   +E  +++    P++V 
Sbjct: 34  LEKLGEGSYGSVYKAIHKETGQIVAI-----KQVPVESDLQEIIKEISIMQQCDSPHVVK 88

Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
           +YG    +  K   + +V E   +G++
Sbjct: 89  YYG----SYFKNTDLWIVMEYCGAGSV 111

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 51.1 bits (123), Expect = 4e-08
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 20/95 (21%)

Query: 105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE-------RARFREEA 157
           M  Y+K ++ +G G++ TVY+G    T   VA   L+E +L   E       R     E 
Sbjct: 1   METYIKLDK-LGEGTYATVYKGKSKLTDNLVA---LKEIRLEHEEGAPCTAIR-----EV 51

Query: 158 EMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELM 192
            +LK L+H NIV+ +   ++  T++  + LV E +
Sbjct: 52  SLLKDLKHANIVTLH---DIIHTEKS-LTLVFEYL 82

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 51.0 bits (123), Expect = 5e-08
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 16/88 (18%)

Query: 115 IGRGSFKTVYRG-LDTQTGVAVAWCELQEKKLNKAERAR----FREEAEMLKGLQHPNIV 169
           +GRG F  VY+G L   T VAV       K+L +         F+ E EM+    H N++
Sbjct: 38  LGRGGFGKVYKGRLADGTLVAV-------KRLKEERTQGGELQFQTEVEMISMAVHRNLL 90

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTL 197
              G+  +T T+R   +LV   M +G++
Sbjct: 91  RLRGFC-MTPTER---LLVYPYMANGSV 114

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 50.2 bits (121), Expect = 8e-08
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 22/92 (23%)

Query: 115 IGRGSFKTVYRG-LDTQTGVAVAWCELQEKKLNKAERAR-------FREEAEMLKGLQHP 166
           +G G F  VY+G ++  T VAV       KKL              F +E +++   QH 
Sbjct: 39  MGEGGFGVVYKGYVNNTT-VAV-------KKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90

Query: 167 NIVSFYGY-WEVTLTKRKYIVLVTELMTSGTL 197
           N+V   G+  +        + LV   M +G+L
Sbjct: 91  NLVELLGFSSD-----GDDLCLVYVYMPNGSL 117

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 49.1 bits (117), Expect = 2e-07
 Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 22/119 (18%)

Query: 85  KPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK 144
           +  S +   S      + +    Y +    IG GS+  V    D      VA      KK
Sbjct: 32  QHHSSKPTASMPRPHSDWQIPDRY-EIRHLIGTGSYGHVCEAYDKLEKRVVAI-----KK 85

Query: 145 LNK-------AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR----KYIVLVTELM 192
           + +        +R   R E  +L  L H ++V      ++ + K       + +V E+ 
Sbjct: 86  ILRVFEDLIDCKRI-LR-EIAILNRLNHDHVVKVL---DIVIPKDVEKFDELYVVLEIA 139

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 48.8 bits (117), Expect = 3e-07
 Identities = 21/117 (17%), Positives = 51/117 (43%), Gaps = 11/117 (9%)

Query: 77  VFQPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVA 136
           V+  ++  +P+ +   ES  V   E  +   Y +   ++GRG +  V+  ++      V 
Sbjct: 10  VYTDVNTHRPREYWDYESHVV---EWGNQDDY-QLVRKLGRGKYSEVFEAINITNNEKVV 65

Query: 137 WCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLTKRKYIVLVTELM 192
                 K L   ++ + + E ++L+ L+  PNI++     +  +++   +V    + 
Sbjct: 66  -----VKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV-FEHVN 116

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 48.4 bits (116), Expect = 3e-07
 Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 26/112 (23%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAER------------------- 150
             ++EIG+GS+  V    +       A   L +KKL +                      
Sbjct: 16  TLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQ 75

Query: 151 -----ARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
                 +  +E  +LK L HPN+V      +    +   + +V EL+  G +
Sbjct: 76  PRGPIEQVYQEIAILKKLDHPNVVKLVEVLD-DPNEDH-LYMVFELVNQGPV 125

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 47.1 bits (113), Expect = 7e-07
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 22/96 (22%)

Query: 105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE--------RARFREE 156
           M  Y    E+IG G++  VY+  +   G   A   L++ +L K +        R     E
Sbjct: 1   MEKYHG-LEKIGEGTYGVVYKAQNN-YGETFA---LKKIRLEKEDEGIPSTTIR-----E 50

Query: 157 AEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELM 192
             +LK L+H NIV  Y   +V  TK++ +VLV E +
Sbjct: 51  ISILKELKHSNIVKLY---DVIHTKKR-LVLVFEHL 82

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 47.0 bits (112), Expect = 1e-06
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
              + +G GSF  V    D ++G   A      KK+ +  R + R E +++K L H NI+
Sbjct: 10  SLGKTLGTGSFGIVCEVFDIESGKRFAL-----KKVLQDPRYKNR-ELDIMKVLDHVNII 63

Query: 170 SFYGYWEVTLTKR 182
               Y+  T  + 
Sbjct: 64  KLVDYFYTTGDEE 76

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 46.4 bits (111), Expect = 1e-06
 Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 20/102 (19%)

Query: 104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARF-------REE 156
           +   Y    E IG G++ TVY+  D  +G  VA   L+  ++               RE 
Sbjct: 7   ATSRYEPVAE-IGVGAYGTVYKARDPHSGHFVA---LKSVRVPNGGGGGGGLPISTVREV 62

Query: 157 A--EMLKGLQHPNIVSFYGYWEVTLTKRKY----IVLVTELM 192
           A    L+  +HPN+V      +V  T R      + LV E +
Sbjct: 63  ALLRRLEAFEHPNVVRLM---DVCATSRTDREIKVTLVFEHV 101

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 46.4 bits (111), Expect = 1e-06
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 22/97 (22%)

Query: 104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE--------RARFRE 155
            M  Y K  E++G G++  VY+  D+  G  VA   L+  +L+  +        R     
Sbjct: 19  LMEKYQK-LEKVGEGTYGVVYKAKDS-QGRIVA---LKRIRLDAEDEGIPSTAIR----- 68

Query: 156 EAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELM 192
           E  +LK L HPNIVS     +V  ++R  + LV E M
Sbjct: 69  EISLLKELHHPNIVSLI---DVIHSERC-LTLVFEFM 101

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 22/98 (22%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL---NK--AERARFREEAEMLKGLQ 164
              + +G G    V+  +D      VA      KK+   +    + A  R E ++++ L 
Sbjct: 14  MDLKPLGCGGNGLVFSAVDNDCDKRVAI-----KKIVLTDPQSVKHA-LR-EIKIIRRLD 66

Query: 165 HPNIVSFY----------GYWEVTLTKRKYIVLVTELM 192
           H NIV  +               +LT+   + +V E M
Sbjct: 67  HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM 104

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 46.0 bits (109), Expect = 2e-06
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYME 53
           T  +M+PE     +Y   VD+++ G+ + E+  S    ME
Sbjct: 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME 278

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 46.0 bits (109), Expect = 2e-06
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 110 KFEEE--IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
            FE    +GRG F  V+   +       A   ++     +  R +   E + L  L+HP 
Sbjct: 7   DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPG 65

Query: 168 IVSFYGYWE 176
           IV ++  W 
Sbjct: 66  IVRYFNAWL 74

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 45.7 bits (109), Expect = 3e-06
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKK 63
           TP ++APE+   E Y  SVD +A G+ M EM     P+          + 
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 222

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 21/94 (22%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-------AERARFREEAEMLKG 162
             +  IGRGS+  VY   D  T   VA      KK+N+        +R   R E  +L  
Sbjct: 29  IIKHLIGRGSYGYVYLAYDKNTEKNVAI-----KKVNRMFEDLIDCKRI-LR-EITILNR 81

Query: 163 LQHPNIVSFYGYWEV----TLTKRKYIVLVTELM 192
           L+   I+  Y   ++     L K   + +V E+ 
Sbjct: 82  LKSDYIIRLY---DLIIPDDLLKFDELYIVLEIA 112

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 45.4 bits (108), Expect = 4e-06
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 15  TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKK 63
           TP ++APE+   E Y  SVD +A G+ M EM     P+          + 
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 265

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 45.3 bits (108), Expect = 4e-06
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 14/90 (15%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK------AERARFREEAEMLKGL 163
           + +  +G G++  V       TG  VA      KK+        A R   R E ++LK  
Sbjct: 14  QLKSLLGEGAYGVVCSATHKPTGEIVAI-----KKIEPFDKPLFALRT-LR-EIKILKHF 66

Query: 164 QHPNIVSFYG-YWEVTLTKRKYIVLVTELM 192
           +H NI++ +      +      + ++ ELM
Sbjct: 67  KHENIITIFNIQRPDSFENFNEVYIIQELM 96

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 45.3 bits (108), Expect = 4e-06
 Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 27/104 (25%)

Query: 104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAE----- 158
            +  Y K  + IG+G+F  V++    +TG  VA      KK+          E E     
Sbjct: 15  EVSKYEKLAK-IGQGTFGEVFKARHRKTGQKVAL-----KKV------LMENEKEGFPIT 62

Query: 159 ------MLKGLQHPNIVS----FYGYWEVTLTKRKYIVLVTELM 192
                 +L+ L+H N+V+               +  I LV +  
Sbjct: 63  ALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC 106

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 44.2 bits (105), Expect = 8e-06
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 16/89 (17%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-------AERARFREEAEMLKGLQH 165
             +G G++ +V   +D ++G  VA      KKL++       A+RA +R E  +LK +QH
Sbjct: 30  THVGSGAYGSVCSAIDKRSGEKVAI-----KKLSRPFQSEIFAKRA-YR-ELLLLKHMQH 82

Query: 166 PNIVSFYGYWEVTLTKRKY--IVLVTELM 192
            N++     +    + R +    LV   M
Sbjct: 83  ENVIGLLDVFTPASSLRNFYDFYLVMPFM 111

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 44.3 bits (105), Expect = 9e-06
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 16/87 (18%)

Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-------AERARFREEAEMLKGLQHPN 167
           IG G+   V    D      VA      KKL++       A+RA +R E  ++K + H N
Sbjct: 33  IGSGAQGIVCAAYDAILERNVAI-----KKLSRPFQNQTHAKRA-YR-ELVLMKCVNHKN 85

Query: 168 IVSFYGYW--EVTLTKRKYIVLVTELM 192
           I+     +  + +L + + + +V ELM
Sbjct: 86  IIGLLNVFTPQKSLEEFQDVYIVMELM 112

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
           TPE++APE+ E++ Y  +VD +  G+ M EM     P+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 14/38 (36%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPY 51
           TP+++APE+   + Y+ SVD ++FG+ + EM   + P+
Sbjct: 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 43.9 bits (103), Expect = 1e-05
 Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPY 51
           TP+++APE+   + Y +SVD +AFG+ + EM   + P+
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
           TP+++APE+ +E  Y  +VD +A G+ + EM     P+
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF 224

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK------AERARFREEAEMLKGLQHP 166
             IG G++  V    D    V VA      KK++        +R   R E ++L   +H 
Sbjct: 33  SYIGEGAYGMVCSAYDNLNKVRVAI-----KKISPFEHQTYCQRT-LR-EIKILLRFRHE 85

Query: 167 NIVSFYG-YWEVTLTKRKYIVLVTELM 192
           NI+         T+ + K + +V +LM
Sbjct: 86  NIIGINDIIRAPTIEQMKDVYIVQDLM 112

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
           TP+++APE+     Y +SVD +AFG+ + EM   + P+
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
           T E+MAPE+     + +S D ++FG+ M EM T   P+
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 16/89 (17%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-------AERARFREEAEMLKGLQH 165
           + IG G+   V    D      VA      KKL++       A+RA +R E  ++K + H
Sbjct: 68  KPIGSGAQGIVCAAYDAVLDRNVAI-----KKLSRPFQNQTHAKRA-YR-ELVLMKCVNH 120

Query: 166 PNIVSFYGYWEVTLTKRKY--IVLVTELM 192
            NI+S    +    T  ++  + LV ELM
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELM 149

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE++APE+  +  YD +VD +  G  + EM     P+      A++Y  +++
Sbjct: 202 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF-YSRNTAEMYDNILN 253

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 16/89 (17%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-------AERARFREEAEMLKGLQH 165
           + +G G++  V   +D +TG  VA      KKL +       A+RA +R E  +LK ++H
Sbjct: 31  QPVGSGAYGAVCSAVDGRTGAKVAI-----KKLYRPFQSELFAKRA-YR-ELRLLKHMRH 83

Query: 166 PNIVSFYGYWEVTLTKRKY--IVLVTELM 192
            N++     +    T   +    LV   M
Sbjct: 84  ENVIGLLDVFTPDETLDDFTDFYLVMPFM 112

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 42.8 bits (101), Expect = 3e-05
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)

Query: 15  TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYM---ECIGPAQIYKKVVS 66
           TP FMAPE+   E YD SVD +A G+ + EM  +  P+    E +   ++ ++V+ 
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 42.5 bits (101), Expect = 3e-05
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
           T E+MAPE+     ++ +VD ++ G  M +M T   P+
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 42.4 bits (100), Expect = 4e-05
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
           TPE++APE+ E++ Y  +VD +  G+ M EM     P+
Sbjct: 312 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 41.9 bits (99), Expect = 5e-05
 Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 2/53 (3%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TPE +APE+     Y+++VD +A G+ + EM+   YP      P QIY+K+VS
Sbjct: 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 41.9 bits (98), Expect = 5e-05
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 9/84 (10%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNI 168
           +   +IG GSF  +Y G + QT   VA     E    K +  +   E+++ + LQ    I
Sbjct: 10  RLGRKIGSGSFGEIYLGTNIQTNEEVAI--KLENV--KTKHPQLLYESKIYRILQGGTGI 65

Query: 169 VSFYGYWEVTLTKRKYIVLVTELM 192
            +   +      +  Y VLV +L+
Sbjct: 66  PNVRWFG----VEGDYNVLVMDLL 85

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 41.5 bits (98), Expect = 7e-05
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 16/89 (17%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-------AERARFREEAEMLKGLQH 165
             +G G++ +V    DT+TG+ VA      KKL++       A+R  +R E  +LK ++H
Sbjct: 35  SPVGSGAYGSVCAAFDTKTGLRVAV-----KKLSRPFQSIIHAKRT-YR-ELRLLKHMKH 87

Query: 166 PNIVSFYGYWEVTLTKRKY--IVLVTELM 192
            N++     +    +  ++  + LVT LM
Sbjct: 88  ENVIGLLDVFTPARSLEEFNDVYLVTHLM 116

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 41.5 bits (98), Expect = 8e-05
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 15  TPEFMAPEMYEEH----YDESVDVYAFGMCMLEMSTSEYPYMECIG--PAQIYKKVVSVS 68
           T  +MAPEM+       Y  +VD ++ G+   E+     PY         +I     +  
Sbjct: 177 TKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV 236

Query: 69  IT 70
           +T
Sbjct: 237 VT 238

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 8/58 (13%)

Query: 15  TPEFMAPEM-----YEEHYDESVDVYAFGMCMLEMSTSEYP-YMECIGPAQIYKKVVS 66
           TP++++PE+      + +Y    D ++ G+ + EM   + P Y +       Y K+++
Sbjct: 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--SLVGTYSKIMN 287

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 15  TPEFMAPEM--YEEHYDESVDVYAFGMCMLEMSTSEYPY 51
           T  +MAPE+      YD S D ++ G  + ++     P+
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPY 51
           T  +MAPE+   E Y  S D +A G  + EM   + P+
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 9/84 (10%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQH-PNI 168
           +   +IG GSF  +Y G D   G  VA     E    K +  +   E+++ K +Q    I
Sbjct: 12  RLGRKIGSGSFGDIYLGTDIAAGEEVA--IKLECV--KTKHPQLHIESKIYKMMQGGVGI 67

Query: 169 VSFYGYWEVTLTKRKYIVLVTELM 192
            +          +  Y V+V EL+
Sbjct: 68  PTIRWCG----AEGDYNVMVMELL 87

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 9/59 (15%)

Query: 15  TPEFMAPEM------YEEHYDESVDVYAFGMCMLEMSTSEYP-YMECIGPAQIYKKVVS 66
           TP++++PE+       +  Y    D ++ G+CM EM   E P Y E     + Y K+++
Sbjct: 239 TPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE--SLVETYGKIMN 295

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 40.6 bits (96), Expect = 2e-04
 Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           TP+++APE+     Y++S+D ++FG+ + EM     P+       + Y+K+++
Sbjct: 166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF-YDSNTMKTYEKILN 217

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 34/108 (31%)

Query: 104 SMRGYLKFEEEIGRGSFKTVYRGLDTQ-TGVAVAWCELQEKKLNKAERARFREEAE---- 158
           + + Y    E IG G++  V++  D +  G  VA   L  K++      R +   E    
Sbjct: 9   ADQQYECVAE-IGEGAYGKVFKARDLKNGGRFVA---L--KRV------RVQTGEEGMPL 56

Query: 159 ----------MLKGLQHPNIVSFYGYWEVTLTKRKY----IVLVTELM 192
                      L+  +HPN+V  +   +V    R      + LV E +
Sbjct: 57  STIREVAVLRHLETFEHPNVVRLF---DVCTVSRTDRETKLTLVFEHV 101

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 6/58 (10%)

Query: 15  TPEFMAPEMYEEH---YDESVDVYAFGMCMLEMSTSEYPY---MECIGPAQIYKKVVS 66
           T E+MAP++       +D++VD ++ G+ M E+ T   P+    E    A+I ++++ 
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK 280

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 11/61 (18%)

Query: 15  TPEFMAPEM--------YEEHYDESVDVYAFGMCMLEMSTSEYP-YMECIGPAQIYKKVV 65
           TP++++PE+            Y    D +A G+   EM   + P Y +    A+ Y K+V
Sbjct: 226 TPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD--STAETYGKIV 283

Query: 66  S 66
            
Sbjct: 284 H 284

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 9/58 (15%), Positives = 19/58 (32%), Gaps = 1/58 (1%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCEL-QEKKLNKAERARFREEAEMLKGLQH 165
           L     +G+          D +TG +         ++       + +EE   L+ L+ 
Sbjct: 80  LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG 137

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 17/91 (18%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-------AERARFREEAEMLKG 162
           +  +++G+G++  V++ +D +TG  VA      KK+         A+R  FRE   +L  
Sbjct: 12  ELVKKLGKGAYGIVWKSIDRRTGEVVAV-----KKIFDAFQNSTDAQRT-FREIM-ILTE 64

Query: 163 LQ-HPNIVSFYGYWEVTLTKRKYIVLVTELM 192
           L  H NIV+      +     + + LV + M
Sbjct: 65  LSGHENIVNLLNV--LRADNDRDVYLVFDYM 93

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 8/125 (6%)

Query: 56  GPAQIYKKVVSVSITSAGPKVVFQPISGVKPQSFERVESPEVKEEERESMRG----YLKF 111
           GP  +  + +   I  A  +   + +                +    ES  G     L  
Sbjct: 18  GPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVR 77

Query: 112 EEEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKAERARFREEAEM--LKGLQHPN 167
              +G+          D +TG    V      E+  + A +    E   +  L+G+++  
Sbjct: 78  GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQK 137

Query: 168 IVSFY 172
               +
Sbjct: 138 QAKVH 142

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 39.8 bits (93), Expect = 3e-04
 Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 18/92 (19%)

Query: 108 YLKFEEEIGRGSFKTVY--RGLDTQTGVAVAWCELQEKKLNKAERARFRE----EAEMLK 161
           +     ++GRG++  VY  +  D +     A        L + E          E  +L+
Sbjct: 22  FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYA--------LKQIEGTGISMSACREIALLR 73

Query: 162 GLQHPNIVSFYGYWEVTLTKR-KYIVLVTELM 192
            L+HPN++S     +V L+   + + L+ +  
Sbjct: 74  ELKHPNVISLQ---KVFLSHADRKVWLLFDYA 102

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 11/53 (20%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 15  TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           T ++++PE+  E    +S D++A G  + ++     P+        I++K++ 
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK 246

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 39.3 bits (92), Expect = 4e-04
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 9/84 (10%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQH-PNI 168
           K    IG GSF  ++ G +      VA     E +  +++  + R+E    K L     I
Sbjct: 13  KVGRRIGEGSFGVIFEGTNLLNNQQVAI--KFEPR--RSDAPQLRDEYRTYKLLAGCTGI 68

Query: 169 VSFYGYWEVTLTKRKYIVLVTELM 192
            + Y +      +  + VLV +L+
Sbjct: 69  PNVYYFG----QEGLHNVLVIDLL 88

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	199
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.87
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.87
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.85
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.84
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.84
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.83
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.83
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.82
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.81
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.8
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.79
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.79
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.79
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.79
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.76
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.75
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.74
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.69
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.69
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.68
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.67
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.66
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.65
3uqc_A	286	Probable conserved transmembrane protein; structur	99.65
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.65
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.64
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.64
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.64
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.63
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.63
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.63
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.63
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.63
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.62
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.62
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.62
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.62
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.62
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.62
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.61
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.61
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.61
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.61
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.61
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.61
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.6
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.6
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.6
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.6
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.6
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.6
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.6
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.6
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.6
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.6
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.6
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.59
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.59
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.59
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.59
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.59
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.59
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.59
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.59
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.58
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.58
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.58
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.58
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.58
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.58
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.58
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.58
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.58
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.58
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.58
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.58
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.58
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.58
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.57
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.57
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.57
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.57
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.57
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.57
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.57
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.57
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.56
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.56
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.56
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.56
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.56
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.56
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.56
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.56
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.56
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.55
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.55
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.55
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.55
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.55
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.55
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.55
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.55
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.55
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.55
3bhy_A	283	Death-associated protein kinase 3; death associate	99.55
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.54
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.54
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.54
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.54
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.54
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.54
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.54
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.54
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.54
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.54
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.54
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.54
3niz_A	311	Rhodanese family protein; structural genomics, str	99.54
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.54
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.53
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.53
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.53
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.53
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.53
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.53
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.53
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.53
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.53
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.53
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.53
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.53
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.52
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.52
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.52
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.52
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.52
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.52
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.52
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.52
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.52
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.52
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.52
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.52
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.52
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.52
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.52
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.52
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.51
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.51
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.51
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.51
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.51
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.51
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.51
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.51
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.51
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.51
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.51
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.51
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.5
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.5
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.5
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.5
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.5
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.5
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.5
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.5
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.5
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.5
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.49
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.49
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.49
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.49
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.49
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.49
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.49
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.49
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.49
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.48
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.48
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.48
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.47
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.47
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.47
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.47
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.47
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.47
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.47
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.47
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.46
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.46
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.46
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.46
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.46
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.46
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.46
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.45
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.45
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.45
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.45
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.45
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.45
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.45
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.45
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.44
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.44
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.44
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.44
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.44
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.44
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.43
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.43
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.43
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.43
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.43
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.43
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.43
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.42
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.42
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.42
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.42
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.41
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.41
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.41
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.41
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.39
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.39
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.39
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.39
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.39
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.39
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.37
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.37
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.36
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.36
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.36
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.36
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.36
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.35
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.35
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.35
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.34
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.34
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.34
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.34
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.34
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.33
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.33
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.33
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.32
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.32
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.29
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.29
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.29
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.29
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.29
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.28
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.28
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.28
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.26
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.25
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.24
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.24
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.24
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.23
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.23
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.22
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.22
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.21
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.2
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.2
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.2
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.19
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.18
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.18
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.18
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.18
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.18
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.16
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.15
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.15
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.15
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.15
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.13
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.13
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.13
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.13
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.12
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.12
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.12
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.12
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.11
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.11
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.11
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.1
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.1
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.1
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.09
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.09
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.09
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.08
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.08
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.08
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.08
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.08
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.07
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.06
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.06
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.06
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.06
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.06
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.06
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.05
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.05
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.05
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.05
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.05
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.04
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.04
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.04
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.03
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.03
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.03
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.03
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.02
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.01
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.01
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.01
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.01
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.99
3ork_A	311	Serine/threonine protein kinase; structural genomi	98.99
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	98.99
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	98.99
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.99
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.99
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	98.99
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.99
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	98.99
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	98.99
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.98
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	98.98
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.98
3niz_A	311	Rhodanese family protein; structural genomics, str	98.98
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	98.98
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	98.98
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.98
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	98.98
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	98.97
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.97
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.97
3an0_A	340	Dual specificity mitogen-activated protein kinase;	98.96
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	98.96
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	98.96
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	98.96
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.96
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.96
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	98.95
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	98.95
3soc_A	322	Activin receptor type-2A; structural genomics cons	98.94
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.94
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	98.94
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.94
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	98.94
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.93
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.93
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.93
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	98.93
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	98.93
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	98.93
3bhy_A	283	Death-associated protein kinase 3; death associate	98.93
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	98.93
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	98.93
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.92
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.92
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	98.92
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.92
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	98.92
3fme_A	290	Dual specificity mitogen-activated protein kinase;	98.91
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	98.91
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.91
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.91
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	98.91
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	98.91
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.9
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	98.9
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	98.9
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.9
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.9
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.9
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.89
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.89
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	98.89
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.89
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.89
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	98.88
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.88
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	98.88
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.87
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	98.87
3q4u_A	301	Activin receptor type-1; structural genomics conso	98.87
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	98.87
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	98.87
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.87
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.86
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	98.86
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	98.86
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	98.86
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	98.86
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.86
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	98.86
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.86
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	98.86
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	98.86
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	98.85
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	98.85
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	98.84
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	98.84
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	98.84
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	98.84
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	98.83
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	98.83
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	98.83
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	98.83
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.83
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.82
3aln_A	327	Dual specificity mitogen-activated protein kinase;	98.82
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	98.82
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	98.82
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	98.82
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.82
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	98.82
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	98.82
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	98.82
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	98.81
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	98.81
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	98.81
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	98.8
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	98.8
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	98.8
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	98.79
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.79
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	98.79
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	98.79
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.79
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	98.79
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	98.78
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	98.78
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	98.78
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	98.78
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	98.78
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	98.77
3pls_A	298	Macrophage-stimulating protein receptor; protein k	98.77
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	98.77
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.77
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	98.77
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	98.77
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	98.77
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	98.76
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	98.76
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	98.76
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	98.76
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.76
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	98.75
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	98.75
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	98.75
2a19_B	284	Interferon-induced, double-stranded RNA-activated	98.75
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	98.75
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.74
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	98.74
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	98.73
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	98.73
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.73
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	98.73
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	98.72
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	98.72
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	98.71
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	98.71
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	98.7
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.68
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	98.67
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.65
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.65
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.65
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	98.64
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	98.62
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	98.62
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	98.6
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	98.6
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	98.54

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.87  E-value=3.1e-22  Score=153.75  Aligned_cols=88  Identities=25%  Similarity=0.367  Sum_probs=75.6

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ++|++++.||+|+||+||+|.+..++..||+|.+..........+.+.+|+.++++|+|||||++++++.    +++.+|
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~----~~~~~y   99 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFE----ENGSLY   99 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE----ETTEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEE----ECCEEE
Confidence            5689999999999999999999999999999999877677777888999999999999999999999998    788999


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      ||||||+||+|.
T Consensus       100 iVmEy~~gg~L~  111 (350)
T 4b9d_A          100 IVMDYCEGGDLF  111 (350)
T ss_dssp             EEEECCTTCBHH
T ss_pred             EEEeCCCCCcHH
Confidence            999999999985

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.87  E-value=7.2e-22  Score=148.46  Aligned_cols=93  Identities=74%  Similarity=1.177  Sum_probs=82.1

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+++++.+.||+|+||+||+|.+..++..||+|.+..........+.|.+|+.++++++|||||+++++|.+.....+.+
T Consensus        25 gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~  104 (290)
T 3fpq_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI  104 (290)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             CceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEE
Confidence            34568888999999999999999999999999999877777777888999999999999999999999987443445778


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |||||||+||+|.
T Consensus       105 ~lvmEy~~gg~L~  117 (290)
T 3fpq_A          105 VLVTELMTSGTLK  117 (290)
T ss_dssp             EEEEECCCSCBHH
T ss_pred             EEEEeCCCCCCHH
Confidence            9999999999985

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.85  E-value=2.4e-21  Score=146.35  Aligned_cols=89  Identities=33%  Similarity=0.507  Sum_probs=74.5

Q ss_pred             hcccccccceeecCccceeEEEEEEC-----CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDT-----QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      ..++++.+.+.||+|+||+||+|.+.     .++..||+|.+..  ......+.|.+|+.++++++|||||+++++|.  
T Consensus        10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--   85 (299)
T 4asz_A           10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD--ASDNARKDFHREAELLTNLQHEHIVKFYGVCV--   85 (299)
T ss_dssp             CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--
T ss_pred             cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCC--CChHHHHHHHHHHHHHHhCCCCCCccEEEEEe--
Confidence            34567899999999999999999865     3578899999964  34556778999999999999999999999997  


Q ss_pred             ecCCceEEEEEeccCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~  198 (199)
                        +.+..|||||||+||+|.
T Consensus        86 --~~~~~~lV~Ey~~~G~L~  103 (299)
T 4asz_A           86 --EGDPLIMVFEYMKHGDLN  103 (299)
T ss_dssp             --SSSSEEEEEECCTTCBHH
T ss_pred             --eCCEEEEEEEcCCCCcHH
Confidence              778899999999999985

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.84  E-value=6.3e-21  Score=145.94  Aligned_cols=88  Identities=33%  Similarity=0.499  Sum_probs=75.6

Q ss_pred             cccccccceeecCccceeEEEEEEC-----CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDT-----QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      .++++.+.+.||+|+||+||+|.+.     .++..||+|.+..  ......+.|.+|+.+|++++|||||+++++|.   
T Consensus        39 ~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~---  113 (329)
T 4aoj_A           39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTMLQHQHIVRFFGVCT---  113 (329)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC--CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC---
T ss_pred             CHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc--CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE---
Confidence            3467888899999999999999865     3578899999964  34556778999999999999999999999997   


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                       +.+..|||||||++|+|.
T Consensus       114 -~~~~~~lV~Ey~~~G~L~  131 (329)
T 4aoj_A          114 -EGRPLLMVFEYMRHGDLN  131 (329)
T ss_dssp             -SSSSEEEEEECCTTCBHH
T ss_pred             -ECCEEEEEEEcCCCCcHH
Confidence             778899999999999984

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.84  E-value=2e-21  Score=147.02  Aligned_cols=88  Identities=23%  Similarity=0.322  Sum_probs=77.9

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ++|++++.||+|+||+||+|.+..++..||+|.+....... ...+.+.+|+.++++++|||||++++++.    +.+.+
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~----~~~~~  107 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ----DDEKL  107 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE----CSSEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE----eCCEE
Confidence            57999999999999999999999999999999997543222 23467899999999999999999999998    78899


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |||||||+||+|.
T Consensus       108 yivmEy~~gG~L~  120 (311)
T 4aw0_A          108 YFGLSYAKNGELL  120 (311)
T ss_dssp             EEEECCCTTEEHH
T ss_pred             EEEEecCCCCCHH
Confidence            9999999999985

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.83  E-value=4.9e-21  Score=145.27  Aligned_cols=89  Identities=31%  Similarity=0.468  Sum_probs=73.5

Q ss_pred             cccccccceeecCccceeEEEEEEC-----CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDT-----QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      ....+++.+.||+|+||+||+|.+.     .++..||+|.+.... .....+.|.+|+.++++++|||||+++|+|.   
T Consensus        24 ~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~---   99 (308)
T 4gt4_A           24 SLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVT---   99 (308)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred             CHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEE---
Confidence            3456788899999999999999864     356889999986432 3334567999999999999999999999987   


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                       ..+..+||||||++|+|.
T Consensus       100 -~~~~~~lV~Ey~~~G~L~  117 (308)
T 4gt4_A          100 -KDQPLSMIFSYCSHGDLH  117 (308)
T ss_dssp             -SSSSCEEEEECCSSCBHH
T ss_pred             -ECCEEEEEEEcCCCCcHH
Confidence             778899999999999984

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.83  E-value=9.4e-21  Score=143.40  Aligned_cols=90  Identities=29%  Similarity=0.384  Sum_probs=77.1

Q ss_pred             hhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          101 ERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       101 ~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      .|+...+.+++.+.||+|+||+||+|.+..   .+|+|.+..........+.|.+|+.++++++|||||++++++.    
T Consensus        30 ~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~----  102 (307)
T 3omv_A           30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT----  102 (307)
T ss_dssp             CCBCCTTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC----
T ss_pred             CcEEcHHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE----
Confidence            456667888999999999999999998654   5899998765556667788999999999999999999999875    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                       .+..|||||||+||+|.
T Consensus       103 -~~~~~iVmEy~~gGsL~  119 (307)
T 3omv_A          103 -KDNLAIVTQWCEGSSLY  119 (307)
T ss_dssp             -SSSCEEEEECCSSCBHH
T ss_pred             -CCeEEEEEEcCCCCCHH
Confidence             45679999999999985

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.82  E-value=4.2e-21  Score=147.28  Aligned_cols=87  Identities=26%  Similarity=0.364  Sum_probs=76.8

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.|++.+.||+|+||+||+|.+..++..||+|.+......  ..+.+.+|+.+|++++|||||+++++|.    ..+.+
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~----~~~~~  146 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYL----VGDEL  146 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS--SGGGGHHHHHHHHHCCCTTBCCEEEEEE----ETTEE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh--HHHHHHHHHHHHHhCCCCCCCcEEEEEE----ECCEE
Confidence            45789999999999999999999999999999999654322  2356889999999999999999999998    77899


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |||||||+||+|.
T Consensus       147 ~ivmEy~~gg~L~  159 (346)
T 4fih_A          147 WVVMEFLEGGALT  159 (346)
T ss_dssp             EEEECCCTTEEHH
T ss_pred             EEEEeCCCCCcHH
Confidence            9999999999985

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.81  E-value=9e-21  Score=148.85  Aligned_cols=87  Identities=26%  Similarity=0.360  Sum_probs=77.0

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ++.|++.+.||+|+||.||+|.+..++..||+|.+.....  ...+.+.+|+.+|++++|||||+++++|.    ..+.+
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~----~~~~~  223 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYL----VGDEL  223 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC--SSGGGHHHHHHHHHHCCCTTBCCEEEEEE----ETTEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCCCceEEEEE----ECCEE
Confidence            4679999999999999999999999999999999964432  22456889999999999999999999998    67899


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |||||||+||+|.
T Consensus       224 ~iVmEy~~gG~L~  236 (423)
T 4fie_A          224 WVVMEFLEGGALT  236 (423)
T ss_dssp             EEEEECCTTEEHH
T ss_pred             EEEEeCCCCCcHH
Confidence            9999999999985

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.80  E-value=8.4e-20  Score=138.04  Aligned_cols=91  Identities=22%  Similarity=0.386  Sum_probs=73.8

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec------
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT------  180 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------  180 (199)
                      ++|++.+.||+|+||+||+|.+..++..||+|.+.... .....+.+.+|+.++++++|||||+++++|.+...      
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~   83 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP   83 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence            35889999999999999999999999999999986432 44456789999999999999999999998863211      


Q ss_pred             --CCceEEEEEeccCCCCCC
Q psy360          181 --KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 --~~~~~~lv~E~~~~G~L~  198 (199)
                        ....+|||||||+||+|.
T Consensus        84 ~~~~~~l~ivmE~~~gg~L~  103 (299)
T 4g31_A           84 SSPKVYLYIQMQLCRKENLK  103 (299)
T ss_dssp             ---CEEEEEEEECCCSCCHH
T ss_pred             cCCCcEEEEEEecCCCCcHH
Confidence              223589999999999984

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.79  E-value=8.4e-20  Score=136.16  Aligned_cols=87  Identities=30%  Similarity=0.460  Sum_probs=70.5

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ++|++.+.||+|+||+||+|.+..++..||+|.+........ ..+.+.+|+.++++++|||||++++++.    ..+..
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~----~~~~~   88 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK----SKDEI   88 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEE----CSSEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE----ECCEE
Confidence            468999999999999999999999999999999976543332 3567999999999999999999999998    78899


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ||||||| +|+|.
T Consensus        89 ~ivmEy~-~g~L~  100 (275)
T 3hyh_A           89 IMVIEYA-GNELF  100 (275)
T ss_dssp             EEEEECC-CEEHH
T ss_pred             EEEEeCC-CCCHH
Confidence            9999999 56663

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.79  E-value=7.2e-20  Score=139.98  Aligned_cols=81  Identities=31%  Similarity=0.479  Sum_probs=72.7

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.++||+|+||+||+|.+..++..||+|.+.....       ..+|+.++++++|||||++++++.    +.+.+|
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~----~~~~~~  126 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVR----EGPWVN  126 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEE----ETTEEE
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEE----ECCEEE
Confidence            568888999999999999999999999999999975432       246999999999999999999998    778999


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      ||||||+||+|.
T Consensus       127 ivmEy~~gg~L~  138 (336)
T 4g3f_A          127 IFMELLEGGSLG  138 (336)
T ss_dssp             EEECCCTTCBHH
T ss_pred             EEEeccCCCcHH
Confidence            999999999985

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.79  E-value=9.2e-21  Score=143.20  Aligned_cols=88  Identities=22%  Similarity=0.338  Sum_probs=69.6

Q ss_pred             cccccceeecCccceeEEEEEEC---CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDT---QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~---~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ++|++++.||+|+||+||+|.+.   .++..||+|.+............+.+|+.++++++|||||++++++.    +.+
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~----~~~   99 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQ----TEG   99 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEE----ETT
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEE----ECC
Confidence            57999999999999999999873   46789999998654332222345788999999999999999999998    678


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      .+|||||||+||+|.
T Consensus       100 ~~~ivmEy~~gg~L~  114 (304)
T 3ubd_A          100 KLYLILDFLRGGDLF  114 (304)
T ss_dssp             EEEEEECCCTTCEEH
T ss_pred             EEEEEEEcCCCCCHH
Confidence            999999999999985

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.79  E-value=1.4e-19  Score=139.60  Aligned_cols=98  Identities=23%  Similarity=0.287  Sum_probs=80.9

Q ss_pred             chhhhhhhcccccccceeecCccceeEEEEEECCC-----CcEEEEEEecccccCHHHHHHHHHHHHHHhcCCC-CCccc
Q psy360           97 VKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQT-----GVAVAWCELQEKKLNKAERARFREEAEMLKGLQH-PNIVS  170 (199)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~-----~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~  170 (199)
                      .+...|+..++.|++.+.||+|+||+||+|.+.+.     ++.||+|.+... ......+.|.+|+.+++++.| ||||+
T Consensus        54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~-~~~~~~~~~~~E~~il~~l~hhpnIV~  132 (353)
T 4ase_A           54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVN  132 (353)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccc-cChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence            34566888889999999999999999999987654     357999998643 345556789999999999965 99999


Q ss_pred             eeeeeeeeecCCceEEEEEeccCCCCCC
Q psy360          171 FYGYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       171 l~~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++++|..   ..+.+|||||||++|+|.
T Consensus       133 l~g~~~~---~~~~~~iV~Ey~~~G~L~  157 (353)
T 4ase_A          133 LLGACTK---PGGPLMVIVEFCKFGNLS  157 (353)
T ss_dssp             EEEEECC---TTSCCEEEEECCTTEEHH
T ss_pred             EEEEEEe---cCCEEEEEEEcCCCCCHH
Confidence            9998851   356789999999999984

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.76  E-value=1.5e-18  Score=131.51  Aligned_cols=87  Identities=24%  Similarity=0.254  Sum_probs=67.7

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +++.+.+.||+|+||+||+|.+  ++..||+|.+....   .....+..|+..+.+++|||||+++++|..........|
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~   77 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence            4578889999999999999987  47799999986432   122234456777788999999999999874322334789


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      ||||||+||+|.
T Consensus        78 lV~Ey~~~gsL~   89 (303)
T 3hmm_A           78 LVSDYHEHGSLF   89 (303)
T ss_dssp             EEEECCTTCBHH
T ss_pred             EEecCCCCCcHH
Confidence            999999999985

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.75  E-value=6.3e-18  Score=138.19  Aligned_cols=87  Identities=25%  Similarity=0.411  Sum_probs=78.2

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .++|++++.||+|+||.||+|.+..++..||+|.+...  .....+.+.+|+.+|+.++|||||+++++|.    ..+.+
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~----~~~~~  229 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP--HESDKETVRKEIQTMSVLRHPTLVNLHDAFE----DDNEM  229 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEE----CSSEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc--chhhHHHHHHHHHHHHhCCCCCCCeEEEEEE----ECCEE
Confidence            35789999999999999999999999999999998643  3445677899999999999999999999998    78899


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |||||||+||+|.
T Consensus       230 ~iv~E~~~gg~L~  242 (573)
T 3uto_A          230 VMIYEFMSGGELF  242 (573)
T ss_dssp             EEEEECCCCCBHH
T ss_pred             EEEEeecCCCcHH
Confidence            9999999999984

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.74  E-value=5.7e-18  Score=132.68  Aligned_cols=91  Identities=24%  Similarity=0.276  Sum_probs=76.9

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee--cCCc
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL--TKRK  183 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~~  183 (199)
                      .+.|++++.||+|+||+||+|.+..++..||+|.+..........+.+.+|+.+|+.++|||||++++++....  ...+
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence            35799999999999999999999999999999999766555666778999999999999999999999875211  1346


Q ss_pred             eEEEEEeccCCCCC
Q psy360          184 YIVLVTELMTSGTL  197 (199)
Q Consensus       184 ~~~lv~E~~~~G~L  197 (199)
                      .+|||||||+ |+|
T Consensus       133 ~~~ivmE~~~-g~L  145 (398)
T 4b99_A          133 SVYVVLDLME-SDL  145 (398)
T ss_dssp             CEEEEEECCS-EEH
T ss_pred             EEEEEEeCCC-CCH
Confidence            7999999997 445

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.69  E-value=7.2e-17  Score=132.71  Aligned_cols=92  Identities=22%  Similarity=0.260  Sum_probs=74.9

Q ss_pred             hhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH----HHHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK----AERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      +...++|++++.||+|+||+||+|.+..++..||+|.+.+.....    ........++.+++.++|||||+++++|.  
T Consensus       185 ~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~--  262 (689)
T 3v5w_A          185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH--  262 (689)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE--
T ss_pred             CCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE--
Confidence            344567999999999999999999999999999999997543221    11222334567778889999999999998  


Q ss_pred             ecCCceEEEEEeccCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~  198 (199)
                        +.+.+|||||||+||+|.
T Consensus       263 --~~~~lylVmEy~~GGdL~  280 (689)
T 3v5w_A          263 --TPDKLSFILDLMNGGDLH  280 (689)
T ss_dssp             --CSSEEEEEECCCCSCBHH
T ss_pred             --ECCEEEEEEecCCCCcHH
Confidence              788999999999999985

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.69  E-value=1.6e-16  Score=121.66  Aligned_cols=90  Identities=28%  Similarity=0.415  Sum_probs=81.6

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..++|++.+.||+|+||.||+|.+..++..||+|.+..........+.+.+|+.+++.++||||+++++++.    ..+.
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~----~~~~   88 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE----TEKT   88 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE----CSSE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE----ECCE
Confidence            346789999999999999999999999999999999876666677788999999999999999999999987    7888


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .|+||||+++|+|.
T Consensus        89 ~~lv~e~~~~~~L~  102 (328)
T 3fe3_A           89 LYLIMEYASGGEVF  102 (328)
T ss_dssp             EEEEECCCTTCBHH
T ss_pred             EEEEEECCCCCcHH
Confidence            99999999999874

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.68  E-value=8.6e-17  Score=124.59  Aligned_cols=90  Identities=18%  Similarity=0.279  Sum_probs=75.7

Q ss_pred             hhhhcccccccceeecCccceeEEEEEEC---CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeee
Q psy360          101 ERESMRGYLKFEEEIGRGSFKTVYRGLDT---QTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWE  176 (199)
Q Consensus       101 ~~~~~~~~~~~~~~lG~G~fg~v~~~~~~---~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~  176 (199)
                      ..|...+.|++.+.||+|+||+||+|.+.   .++..||+|.+....    ....+.+|+.++..+ +|||||+++++|.
T Consensus        15 ~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~   90 (361)
T 4f9c_A           15 AVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFR   90 (361)
T ss_dssp             HSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEE
T ss_pred             hcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEE
Confidence            44566788999999999999999999764   467889999986432    234578899999998 6999999999988


Q ss_pred             eeecCCceEEEEEeccCCCCCC
Q psy360          177 VTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       177 ~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                          ..+.+|||||||+||+|.
T Consensus        91 ----~~~~~~lvmE~~~g~~L~  108 (361)
T 4f9c_A           91 ----KNDHVVIAMPYLEHESFL  108 (361)
T ss_dssp             ----ETTEEEEEEECCCCCCHH
T ss_pred             ----ECCEEEEEEeCCCcccHH
Confidence                788999999999999874

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.67  E-value=2.8e-16  Score=121.87  Aligned_cols=90  Identities=31%  Similarity=0.485  Sum_probs=81.5

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+..........+.+.+|+.++++++||||+++++++.    ..+.
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~----~~~~  102 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ----EESF  102 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE----CSSE
T ss_pred             cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE----eCCE
Confidence            456789999999999999999999999999999999876666667778999999999999999999999987    7889


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .|+||||++||+|.
T Consensus       103 ~~lv~e~~~gg~L~  116 (362)
T 2bdw_A          103 HYLVFDLVTGGELF  116 (362)
T ss_dssp             EEEEECCCCSCBHH
T ss_pred             EEEEEecCCCCCHH
Confidence            99999999999874

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.65  E-value=8.1e-16  Score=115.51  Aligned_cols=95  Identities=73%  Similarity=1.145  Sum_probs=83.0

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ...++|++.+.||+|+||.||+|.+..++..+|+|.+..........+.+.+|+.++++++||||+++++++........
T Consensus        23 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~  102 (290)
T 1t4h_A           23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK  102 (290)
T ss_dssp             TTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCE
T ss_pred             cCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCc
Confidence            34567899999999999999999999999999999998776677778889999999999999999999998864434467


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus       103 ~~~lv~e~~~~~~L~  117 (290)
T 1t4h_A          103 CIVLVTELMTSGTLK  117 (290)
T ss_dssp             EEEEEEECCCSCBHH
T ss_pred             eEEEEEEecCCCCHH
Confidence            799999999999874

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.65  E-value=5.1e-16  Score=116.72  Aligned_cols=90  Identities=16%  Similarity=0.138  Sum_probs=78.9

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..||+|.+...... ....+.+.+|+.++.+++||||+++++++.    ..+
T Consensus        29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~----~~~  104 (286)
T 3uqc_A           29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVH----TRA  104 (286)
T ss_dssp             TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE----ETT
T ss_pred             ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEE----ECC
Confidence            446799999999999999999999999999999999755433 445678999999999999999999999987    678


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..|+||||++||+|.
T Consensus       105 ~~~lv~e~~~g~~L~  119 (286)
T 3uqc_A          105 GGLVVAEWIRGGSLQ  119 (286)
T ss_dssp             EEEEEEECCCEEEHH
T ss_pred             cEEEEEEecCCCCHH
Confidence            899999999999874

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.65  E-value=3.4e-16  Score=124.44  Aligned_cols=90  Identities=28%  Similarity=0.406  Sum_probs=79.2

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+..........+.+.+|+.+++.++||||+++++++.    ..+.
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----~~~~   84 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS----EEGH   84 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEE----CSSE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEE----ECCE
Confidence            456789999999999999999999999999999999766655556778999999999999999999999987    7889


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .|+|||||+||+|.
T Consensus        85 ~~lv~E~~~gg~L~   98 (444)
T 3soa_A           85 HYLIFDLVTGGELF   98 (444)
T ss_dssp             EEEEECCCBCCBHH
T ss_pred             EEEEEEeCCCCCHH
Confidence            99999999999884

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.64  E-value=2.9e-16  Score=121.71  Aligned_cols=91  Identities=26%  Similarity=0.487  Sum_probs=78.6

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH----HHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA----ERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      ...+.|++.+.||+|+||.||+|.+..++..+|+|.+........    ..+.+.+|+.++++++||||+++++++.   
T Consensus         9 ~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~---   85 (361)
T 2yab_A            9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYE---   85 (361)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEE---
T ss_pred             ChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEE---
Confidence            355779999999999999999999999999999999875433211    2466899999999999999999999987   


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                       ..+..|+||||++||+|.
T Consensus        86 -~~~~~~lv~e~~~gg~L~  103 (361)
T 2yab_A           86 -NRTDVVLILELVSGGELF  103 (361)
T ss_dssp             -CSSEEEEEEECCCSCBHH
T ss_pred             -eCCEEEEEEEcCCCCcHH
Confidence             778999999999999884

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.64  E-value=9.6e-16  Score=119.81  Aligned_cols=90  Identities=23%  Similarity=0.279  Sum_probs=81.5

Q ss_pred             cccccccceeecCc--cceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          105 MRGYLKFEEEIGRG--SFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G--~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ..+.|++.+.||+|  +||.||+|.+..++..||+|.+..........+.+.+|+.+++.++||||+++++++.    ..
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~   98 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFI----AD   98 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE----ET
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEE----EC
Confidence            34679999999999  9999999999999999999999876666667788999999999999999999999987    67


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..|+|||||++|+|.
T Consensus        99 ~~~~lv~e~~~~~~L~  114 (389)
T 3gni_B           99 NELWVVTSFMAYGSAK  114 (389)
T ss_dssp             TEEEEEEECCTTCBHH
T ss_pred             CEEEEEEEccCCCCHH
Confidence            8899999999999874

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.64  E-value=1.4e-15  Score=115.34  Aligned_cols=87  Identities=28%  Similarity=0.492  Sum_probs=78.0

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.|++.+.||+|+||.||++.+..++..+|+|.+..  ......+.+.+|+.++++++||||+++++++.    ..+..
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----~~~~~   82 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY----KDKRL   82 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE----ETTEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEe----cCCee
Confidence            4678999999999999999999999999999998843  35566788999999999999999999999987    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        83 ~lv~e~~~~~~L~   95 (310)
T 3s95_A           83 NFITEYIKGGTLR   95 (310)
T ss_dssp             EEEEECCTTCBHH
T ss_pred             EEEEEecCCCcHH
Confidence            9999999999884

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.63  E-value=1.3e-16  Score=119.77  Aligned_cols=59  Identities=73%  Similarity=1.192  Sum_probs=49.9

Q ss_pred             eeeeccCCCcccccccccccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            8 VNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      .+.+.+||+.|||||++.+.++.++|||||||+||||++|+.||....+....+..+..
T Consensus       186 ~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~  244 (290)
T 3fpq_A          186 FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS  244 (290)
T ss_dssp             SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT
T ss_pred             ccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHc
Confidence            45578999999999999888999999999999999999999999876666555554443

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.63  E-value=1e-15  Score=116.29  Aligned_cols=93  Identities=33%  Similarity=0.452  Sum_probs=79.5

Q ss_pred             hhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       100 ~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      .......+.|++.+.||+|+||.||+|.+  ++..+|+|.+..........+.+.+|+.++++++||||+++++++.   
T Consensus        30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---  104 (309)
T 3p86_A           30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT---  104 (309)
T ss_dssp             --CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred             ccccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE---
Confidence            34445567899999999999999999976  4678999998766666666788999999999999999999999987   


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                       ..+..++||||+++|+|.
T Consensus       105 -~~~~~~lv~e~~~~~~L~  122 (309)
T 3p86_A          105 -QPPNLSIVTEYLSRGSLY  122 (309)
T ss_dssp             -STTCCEEEEECCTTCBHH
T ss_pred             -ECCceEEEEecCCCCcHH
Confidence             677889999999999874

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.63  E-value=2.1e-15  Score=112.82  Aligned_cols=90  Identities=31%  Similarity=0.485  Sum_probs=81.6

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..++|++.+.||+|+||.||+|.+..++..+|+|.+..........+.+.+|+.++++++||||+++++++.    ..+.
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~   79 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ----EESF   79 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE----CSSE
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE----cCCE
Confidence            457899999999999999999999999999999999877667767788999999999999999999999987    7788


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++|+|.
T Consensus        80 ~~~v~e~~~~~~l~   93 (284)
T 3kk8_A           80 HYLVFDLVTGGELF   93 (284)
T ss_dssp             EEEEECCCCSCBHH
T ss_pred             EEEEEecCCCCCHH
Confidence            99999999999873

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.63  E-value=4.3e-16  Score=121.41  Aligned_cols=94  Identities=32%  Similarity=0.458  Sum_probs=81.2

Q ss_pred             hhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       100 ~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      ..+....+.|++.+.||+|+||.||+|.+..++..||+|.+... ......+.+.+|+.++++++||||+++++++.   
T Consensus       107 ~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~---  182 (377)
T 3cbl_A          107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCT---  182 (377)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEEC---
T ss_pred             cccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe---
Confidence            34556667899999999999999999999989999999998643 34455567899999999999999999999987   


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                       ..+..++||||+++|+|.
T Consensus       183 -~~~~~~lv~e~~~~g~L~  200 (377)
T 3cbl_A          183 -QKQPIYIVMELVQGGDFL  200 (377)
T ss_dssp             -SSSSCEEEEECCTTCBHH
T ss_pred             -cCCCcEEEEEcCCCCCHH
Confidence             677899999999999874

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.63  E-value=3.4e-16  Score=120.86  Aligned_cols=90  Identities=24%  Similarity=0.385  Sum_probs=76.6

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccC---HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN---KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+......   ....+.+.+|+.+++.++||||+++++++.    .
T Consensus        22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~----~   97 (351)
T 3c0i_A           22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYS----S   97 (351)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEE----E
T ss_pred             cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEE----e
Confidence            446789999999999999999999999999999998643211   112466899999999999999999999987    6


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..|+|||||+||+|.
T Consensus        98 ~~~~~lv~e~~~g~~L~  114 (351)
T 3c0i_A           98 DGMLYMVFEFMDGADLC  114 (351)
T ss_dssp             TTEEEEEEECCSSCBHH
T ss_pred             CCEEEEEEeCCCCCCHH
Confidence            78899999999999873

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.62  E-value=2.1e-15  Score=113.67  Aligned_cols=92  Identities=25%  Similarity=0.377  Sum_probs=72.8

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH------------------------HHHHHHHHHHHHHh
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK------------------------AERARFREEAEMLK  161 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~------------------------~~~~~~~~E~~~l~  161 (199)
                      .+.|++.+.||+|+||.||+|.+..++..+|+|.+.......                        ...+.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            467899999999999999999999999999999986543211                        12356889999999


Q ss_pred             cCCCCCccceeeeeeeeecCCceEEEEEeccCCCCCCC
Q psy360          162 GLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT  199 (199)
Q Consensus       162 ~l~h~niv~l~~~~~~~~~~~~~~~lv~E~~~~G~L~~  199 (199)
                      +++||||+++++++.+  ...+..++||||+++|+|.+
T Consensus        92 ~l~h~~iv~~~~~~~~--~~~~~~~lv~e~~~~~~l~~  127 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDD--PNEDHLYMVFELVNQGPVME  127 (298)
T ss_dssp             TCCCTTBCCEEEEEEC--SSSSEEEEEEECCTTCBSCC
T ss_pred             hCCCCCCCeEEEEEEc--CCCCEEEEEEecCCCCcHHH
Confidence            9999999999998862  13578999999999999863

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.62  E-value=9.8e-16  Score=116.95  Aligned_cols=87  Identities=20%  Similarity=0.291  Sum_probs=76.7

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+...   ......+.+|+.+++.++||||+++++++.    ..+.
T Consensus         3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~----~~~~   75 (321)
T 1tki_A            3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFE----SMEE   75 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEE----ETTE
T ss_pred             hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEe----cCCE
Confidence            346789999999999999999999999999999998643   234566889999999999999999999987    6788


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++|||||+||+|.
T Consensus        76 ~~lv~e~~~g~~L~   89 (321)
T 1tki_A           76 LVMIFEFISGLDIF   89 (321)
T ss_dssp             EEEEECCCCCCBHH
T ss_pred             EEEEEEeCCCCCHH
Confidence            99999999999874

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.62  E-value=1.7e-15  Score=114.12  Aligned_cols=91  Identities=27%  Similarity=0.306  Sum_probs=79.5

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ...+.|++.+.||+|+||.||++.+..++..+|+|.+..... .....+.+.+|+.++++++||||+++++++.    ..
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~----~~   83 (294)
T 4eqm_A            8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE----ED   83 (294)
T ss_dssp             CEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE----CS
T ss_pred             HhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeee----eC
Confidence            345679999999999999999999999999999999854332 3445678999999999999999999999987    78


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..|+||||++||+|.
T Consensus        84 ~~~~lv~e~~~g~~L~   99 (294)
T 4eqm_A           84 DCYYLVMEYIEGPTLS   99 (294)
T ss_dssp             SEEEEEEECCCSCBHH
T ss_pred             CeEEEEEeCCCCCCHH
Confidence            8899999999999874

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.62  E-value=9e-16  Score=117.23  Aligned_cols=88  Identities=24%  Similarity=0.281  Sum_probs=74.3

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .++|++.+.||+|+||.||++.+..++..+|+|.+..... ....+.+.+|+.+++.++||||+++++++.    ..+..
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~----~~~~~   80 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRR----EGNIQ   80 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEE----CSSEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEe----cCCeE
Confidence            4678999999999999999999999999999999864322 223466889999999999999999999987    78889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |+||||+++|+|.
T Consensus        81 ~lv~e~~~~~~L~   93 (323)
T 3tki_A           81 YLFLEYCSGGELF   93 (323)
T ss_dssp             EEEEECCTTEEGG
T ss_pred             EEEEEcCCCCcHH
Confidence            9999999999885

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.62  E-value=9.7e-16  Score=117.75  Aligned_cols=92  Identities=30%  Similarity=0.516  Sum_probs=79.2

Q ss_pred             hhcccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc---CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL---NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      ....+.|++.+.||+|+||.||+|.+..++..+|+|.+.....   .....+.+.+|+.++++++||||+++++++.   
T Consensus        22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~---   98 (345)
T 3hko_A           22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE---   98 (345)
T ss_dssp             HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE---
T ss_pred             hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc---
Confidence            3456789999999999999999999999999999999865322   2334577999999999999999999999997   


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                       ..+..++|||||+||+|.
T Consensus        99 -~~~~~~lv~e~~~gg~L~  116 (345)
T 3hko_A           99 -DEQYICLVMELCHGGHLL  116 (345)
T ss_dssp             -CSSEEEEEEECCCSCBHH
T ss_pred             -cCCeEEEEEeCCCCCcHH
Confidence             788999999999999984

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.62  E-value=2.1e-15  Score=113.86  Aligned_cols=88  Identities=24%  Similarity=0.363  Sum_probs=76.4

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+......  ..+.+.+|+.++++++||||+++++++.    ..+.
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~----~~~~   91 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYL----VGDE   91 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTTBCCEEEEEE----ETTE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc--HHHHHHHHHHHHhcCCCCCCCeEeEEEE----ECCE
Confidence            346789999999999999999999999999999998644322  2356889999999999999999999987    6788


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++|+|.
T Consensus        92 ~~lv~e~~~~~~L~  105 (297)
T 3fxz_A           92 LWVVMEYLAGGSLT  105 (297)
T ss_dssp             EEEEEECCTTCBHH
T ss_pred             EEEEEECCCCCCHH
Confidence            99999999999984

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.61  E-value=8e-16  Score=117.64  Aligned_cols=91  Identities=26%  Similarity=0.507  Sum_probs=78.0

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH----HHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK----AERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      ...++|++.+.||+|+||.||+|.+..++..+|+|.+.......    ...+.+.+|+.++++++||||+++++++.   
T Consensus         8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---   84 (326)
T 2y0a_A            8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE---   84 (326)
T ss_dssp             CHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE---
T ss_pred             CcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE---
Confidence            34567899999999999999999999999999999986543221    12466889999999999999999999987   


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                       ..+..++||||+++|+|.
T Consensus        85 -~~~~~~lv~e~~~~~~L~  102 (326)
T 2y0a_A           85 -NKTDVILILELVAGGELF  102 (326)
T ss_dssp             -CSSEEEEEEECCCSCBHH
T ss_pred             -eCCEEEEEEEcCCCCCHH
Confidence             778899999999999874

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.61  E-value=1.1e-15  Score=123.13  Aligned_cols=90  Identities=26%  Similarity=0.423  Sum_probs=73.7

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+............+.+|+.+++.++||||++++++|.    ....
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~----~~~~  110 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFE----DKRN  110 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEE----CSSE
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEE----eCCE
Confidence            445799999999999999999999999999999998754433334567899999999999999999999998    7888


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .|+|||||++|+|.
T Consensus       111 ~~lv~e~~~~g~L~  124 (494)
T 3lij_A          111 YYLVMECYKGGELF  124 (494)
T ss_dssp             EEEEEECCCSCBHH
T ss_pred             EEEEEecCCCCcHH
Confidence            99999999999874

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.61  E-value=1.1e-15  Score=117.44  Aligned_cols=89  Identities=21%  Similarity=0.287  Sum_probs=76.4

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      .++|++.+.||+|+||+||++.+..++..+|+|.+...... ......+.+|+.+++.++||||+++++++.    ..+.
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~----~~~~   79 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ----THDR   79 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEE----CSSE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEE----eCCE
Confidence            35789999999999999999999999999999998653221 123456889999999999999999999987    7789


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .|+||||++||+|.
T Consensus        80 ~~lv~E~~~gg~L~   93 (337)
T 1o6l_A           80 LCFVMEYANGGELF   93 (337)
T ss_dssp             EEEEEECCTTCBHH
T ss_pred             EEEEEeCCCCCcHH
Confidence            99999999999874

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.61  E-value=2.3e-15  Score=112.27  Aligned_cols=93  Identities=26%  Similarity=0.392  Sum_probs=80.8

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ...++|++.+.||+|+||.||++.+..++..+++|.+..........+.+.+|+.++++++||||+++++++.+  ....
T Consensus         3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~   80 (279)
T 2w5a_A            3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID--RTNT   80 (279)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--GGGT
T ss_pred             CchhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEec--CCCc
Confidence            34568899999999999999999999999999999997666666677889999999999999999999997742  1467


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus        81 ~~~lv~e~~~~~~L~   95 (279)
T 2w5a_A           81 TLYIVMEYCEGGDLA   95 (279)
T ss_dssp             EEEEEEECCTTEEHH
T ss_pred             eEEEEEeCCCCCCHH
Confidence            899999999999874

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.61  E-value=1.7e-15  Score=115.49  Aligned_cols=69  Identities=22%  Similarity=0.411  Sum_probs=59.2

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeee
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWE  176 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  176 (199)
                      +.|++.+.||+|+||.||+|.+..++..||+|.+.... .....+.+.+|+.++++++||||++++++|.
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~   74 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWL   74 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEE
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence            56889999999999999999999999999999986433 2334577999999999999999999999875

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.61  E-value=2.2e-15  Score=115.12  Aligned_cols=90  Identities=29%  Similarity=0.429  Sum_probs=76.8

Q ss_pred             hcccccccceeecCccceeEEEEEECCCC---cEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTG---VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~---~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      ...+.|++.+.||+|+||.||+|.+..++   ..+|+|.+... ......+.+.+|+.++++++||||+++++++.    
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----  120 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG-YTERQRRDFLSEASIMGQFDHPNIIRLEGVVT----  120 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC----
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE----
Confidence            44567999999999999999999987544   45999998643 34556678999999999999999999999987    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      ..+..++||||+++|+|.
T Consensus       121 ~~~~~~lv~e~~~~~~L~  138 (325)
T 3kul_A          121 RGRLAMIVTEYMENGSLD  138 (325)
T ss_dssp             GGGCCEEEEECCTTCBHH
T ss_pred             eCCccEEEeeCCCCCcHH
Confidence            678899999999999884

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.60  E-value=4.7e-15  Score=115.97  Aligned_cols=88  Identities=23%  Similarity=0.437  Sum_probs=77.5

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..++|++.+.||+|+||.||+|.+..++..+|+|.+...  .......+.+|+.+++.++||||+++++++.    ....
T Consensus        49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~----~~~~  122 (387)
T 1kob_A           49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP--YPLDKYTVKNEISIMNQLHHPKLINLHDAFE----DKYE  122 (387)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEE----CSSE
T ss_pred             cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc--chhhHHHHHHHHHHHHhCCCcCCCeEEEEEE----eCCE
Confidence            346799999999999999999999999999999998643  3344567899999999999999999999987    7889


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++|+|.
T Consensus       123 ~~lv~E~~~gg~L~  136 (387)
T 1kob_A          123 MVLILEFLSGGELF  136 (387)
T ss_dssp             EEEEEECCCCCBHH
T ss_pred             EEEEEEcCCCCcHH
Confidence            99999999999874

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.60  E-value=5.5e-16  Score=122.05  Aligned_cols=93  Identities=24%  Similarity=0.300  Sum_probs=77.4

Q ss_pred             hhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      .....+.|++.+.||+|+||+||++.+..++..+|+|.+....... ...+.+.+|+.++..++||||++++++|.    
T Consensus        64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~----  139 (410)
T 3v8s_A           64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ----  139 (410)
T ss_dssp             HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE----
T ss_pred             cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE----
Confidence            3345578999999999999999999999999999999986422111 11234788999999999999999999998    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      ..+..|||||||+||+|.
T Consensus       140 ~~~~~~lV~E~~~gg~L~  157 (410)
T 3v8s_A          140 DDRYLYMVMEYMPGGDLV  157 (410)
T ss_dssp             CSSEEEEEECCCTTEEHH
T ss_pred             ECCEEEEEEeCCCCCcHH
Confidence            788999999999999874

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.60  E-value=2.9e-15  Score=120.96  Aligned_cols=91  Identities=24%  Similarity=0.399  Sum_probs=74.9

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-----------HHHHHHHHHHHHHhcCCCCCcccee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-----------AERARFREEAEMLKGLQHPNIVSFY  172 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv~l~  172 (199)
                      ...+.|++.+.||+|+||.||+|.+..++..+|+|.+.......           ...+.+.+|+.++++++||||++++
T Consensus        33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~  112 (504)
T 3q5i_A           33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF  112 (504)
T ss_dssp             CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            34577999999999999999999999999999999986543221           1246788999999999999999999


Q ss_pred             eeeeeeecCCceEEEEEeccCCCCCC
Q psy360          173 GYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       173 ~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      +++.    .....|||||||+||+|.
T Consensus       113 ~~~~----~~~~~~lv~e~~~gg~L~  134 (504)
T 3q5i_A          113 DVFE----DKKYFYLVTEFYEGGELF  134 (504)
T ss_dssp             EEEE----CSSEEEEEEECCTTCBHH
T ss_pred             EEEE----cCCEEEEEEecCCCCcHH
Confidence            9998    788999999999999874

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.60  E-value=2.8e-15  Score=113.59  Aligned_cols=87  Identities=26%  Similarity=0.374  Sum_probs=77.1

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.+.||+|+||.||+|.+..++..+|+|.+..........+.+.+|+.++++++||||+++++++.    ..+..+
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----~~~~~~   78 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFR----RKRRLH   78 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEE----ETTEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheee----cCCeEE
Confidence            5688999999999999999999999999999998765555555677899999999999999999999987    678899


Q ss_pred             EEEeccCCCCC
Q psy360          187 LVTELMTSGTL  197 (199)
Q Consensus       187 lv~E~~~~G~L  197 (199)
                      +||||+++|+|
T Consensus        79 lv~e~~~~~~l   89 (311)
T 4agu_A           79 LVFEYCDHTVL   89 (311)
T ss_dssp             EEEECCSEEHH
T ss_pred             EEEEeCCCchH
Confidence            99999998865

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.60  E-value=4.3e-15  Score=114.52  Aligned_cols=90  Identities=18%  Similarity=0.250  Sum_probs=78.5

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  182 (199)
                      ..+.|++.+.||+|+||+||++.+..++..+|+|.+..... .....+.+.+|..++.++ +||||+++++++.    ..
T Consensus         7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~----~~   82 (345)
T 3a8x_A            7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ----TE   82 (345)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE----CS
T ss_pred             chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEE----eC
Confidence            34678999999999999999999999999999999976543 344567788999999988 8999999999987    77


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..|+||||++||+|.
T Consensus        83 ~~~~lv~e~~~gg~L~   98 (345)
T 3a8x_A           83 SRLFFVIEYVNGGDLM   98 (345)
T ss_dssp             SEEEEEECCCCSCBHH
T ss_pred             CEEEEEEeCCCCCcHH
Confidence            8999999999999874

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.60  E-value=2e-15  Score=112.82  Aligned_cols=89  Identities=19%  Similarity=0.334  Sum_probs=78.5

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCce
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~  184 (199)
                      .+.|++.+.||+|+||.||+|.+..++..+|+|.+............+.+|+..+..+ +||||+++++++.    ..+.
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~----~~~~   85 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWA----EDDH   85 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEE----ETTE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeee----cCCe
Confidence            4678999999999999999999999999999999876544445567788999999999 8999999999987    6789


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++|+|.
T Consensus        86 ~~lv~e~~~~~~L~   99 (289)
T 1x8b_A           86 MLIQNEYCNGGSLA   99 (289)
T ss_dssp             EEEEEECCTTCBHH
T ss_pred             EEEEEEecCCCcHH
Confidence            99999999999984

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.60  E-value=9.1e-16  Score=121.72  Aligned_cols=94  Identities=23%  Similarity=0.229  Sum_probs=78.3

Q ss_pred             hhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          101 ERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       101 ~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      ......++|++.+.||+|+||+||++.+..++..+|+|.+........ ....+.+|..++..++||||++++++|.   
T Consensus        68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~---  144 (437)
T 4aw2_A           68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ---  144 (437)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE---
T ss_pred             cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe---
Confidence            344556789999999999999999999999999999999864321111 1233788999999999999999999998   


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                       ..+..|||||||+||+|.
T Consensus       145 -~~~~~~lV~Ey~~gg~L~  162 (437)
T 4aw2_A          145 -DDNNLYLVMDYYVGGDLL  162 (437)
T ss_dssp             -CSSEEEEEECCCTTCBHH
T ss_pred             -eCCEEEEEEecCCCCcHH
Confidence             788999999999999984

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.60  E-value=1.8e-15  Score=121.88  Aligned_cols=92  Identities=28%  Similarity=0.507  Sum_probs=79.9

Q ss_pred             hhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       100 ~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      ..++.....|++.+.||+|+||.||+|.+..++..||+|.+......   .+.+.+|+.++++++||||++++++|.   
T Consensus       213 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~---  286 (495)
T 1opk_A          213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCT---  286 (495)
T ss_dssp             SCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC---HHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred             cccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc---hHHHHHHHHHHHhcCCCCEeeEEEEEe---
Confidence            34556677899999999999999999999999999999998654332   456999999999999999999999987   


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                       ..+..+||||||++|+|.
T Consensus       287 -~~~~~~lv~E~~~~g~L~  304 (495)
T 1opk_A          287 -REPPFYIITEFMTYGNLL  304 (495)
T ss_dssp             -SSSSCEEEEECCTTCBHH
T ss_pred             -cCCcEEEEEEccCCCCHH
Confidence             678899999999999884

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.60  E-value=2.1e-15  Score=117.11  Aligned_cols=91  Identities=29%  Similarity=0.376  Sum_probs=75.8

Q ss_pred             hhcccccccceeecCccceeEEEEEE-----CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLD-----TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEV  177 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~-----~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  177 (199)
                      +...++|++.+.||+|+||.||+|.+     ..++..||+|.+.. .........+.+|+.++++++||||+++++++. 
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-  144 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIVRCIGVSL-  144 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCS-SCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccc-ccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe-
Confidence            34567899999999999999999984     45678899999863 234555667899999999999999999999987 


Q ss_pred             eecCCceEEEEEeccCCCCCC
Q psy360          178 TLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~~~~~~~~lv~E~~~~G~L~  198 (199)
                         .....++|||||++|+|.
T Consensus       145 ---~~~~~~lv~e~~~~g~L~  162 (367)
T 3l9p_A          145 ---QSLPRFILLELMAGGDLK  162 (367)
T ss_dssp             ---SSSSCEEEEECCTTEEHH
T ss_pred             ---cCCCCEEEEEeCCCCCHH
Confidence               677889999999999874

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.60  E-value=1.6e-15  Score=118.40  Aligned_cols=91  Identities=22%  Similarity=0.349  Sum_probs=77.6

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ...+.|++.+.||+|+||.||++.+..++..+|+|.+....... ...+.+.+|+.+++.++||||++++++|.    ..
T Consensus        12 v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~----~~   87 (384)
T 4fr4_A           12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ----DE   87 (384)
T ss_dssp             CCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE----CS
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE----eC
Confidence            34467999999999999999999999999999999986432211 13466889999999999999999999987    77


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..|+||||++||+|.
T Consensus        88 ~~~~lv~e~~~gg~L~  103 (384)
T 4fr4_A           88 EDMFMVVDLLLGGDLR  103 (384)
T ss_dssp             SEEEEEECCCTTEEHH
T ss_pred             CEEEEEEecCCCCcHH
Confidence            8899999999999874

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.60  E-value=1.8e-15  Score=117.72  Aligned_cols=91  Identities=24%  Similarity=0.383  Sum_probs=76.5

Q ss_pred             hhcccccccceeecCccceeEEEEEEC-------CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDT-------QTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGY  174 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~-------~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~  174 (199)
                      ....+.|++.+.||+|+||.||+|.+.       .++..+|+|.+... ......+.+.+|+.+++.+ +||||++++++
T Consensus        77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~  155 (370)
T 2psq_A           77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGA  155 (370)
T ss_dssp             BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEE
T ss_pred             cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence            345678999999999999999999864       34567999998643 3445567899999999999 89999999999


Q ss_pred             eeeeecCCceEEEEEeccCCCCCC
Q psy360          175 WEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       175 ~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      |.    ..+..|+||||+++|+|.
T Consensus       156 ~~----~~~~~~lv~e~~~~g~L~  175 (370)
T 2psq_A          156 CT----QDGPLYVIVEYASKGNLR  175 (370)
T ss_dssp             EC----SSSSCEEEEECCTTCBHH
T ss_pred             Ec----cCCCEEEEEEcCCCCCHH
Confidence            87    678899999999999984

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.59  E-value=2.1e-15  Score=115.05  Aligned_cols=89  Identities=20%  Similarity=0.307  Sum_probs=76.2

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      .+.|++.+.||+|+||+||++.+..++..+|+|.+....... ...+.+.+|+.+++.++||||+++++++.    ..+.
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~----~~~~   80 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ----DAQQ   80 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE----CSSE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEE----eCCE
Confidence            357899999999999999999999999999999986532211 12456788999999999999999999987    7789


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .|+||||++||+|.
T Consensus        81 ~~lv~e~~~gg~L~   94 (318)
T 1fot_A           81 IFMIMDYIEGGELF   94 (318)
T ss_dssp             EEEEECCCCSCBHH
T ss_pred             EEEEEeCCCCCCHH
Confidence            99999999999874

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.59  E-value=2.3e-15  Score=113.22  Aligned_cols=85  Identities=25%  Similarity=0.298  Sum_probs=75.1

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.+.||+|+||.||+|.+..++..+|+|.+............+.+|+.++++++||||+++++++.    ..+..+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~   77 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH----SDKKLT   77 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE----ETTEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEE----eCCEEE
Confidence            4688999999999999999999999999999999765544445677889999999999999999999987    678899


Q ss_pred             EEEeccCCC
Q psy360          187 LVTELMTSG  195 (199)
Q Consensus       187 lv~E~~~~G  195 (199)
                      +||||++++
T Consensus        78 lv~e~~~~~   86 (292)
T 3o0g_A           78 LVFEFCDQD   86 (292)
T ss_dssp             EEEECCSEE
T ss_pred             EEEecCCCC
Confidence            999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.59  E-value=1.5e-15  Score=119.63  Aligned_cols=94  Identities=28%  Similarity=0.298  Sum_probs=78.9

Q ss_pred             hhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          101 ERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       101 ~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      ......++|++.+.||+|+||+||++.+..++..+|+|.+....... ...+.+.+|..++..++||||+++++++.   
T Consensus        55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~---  131 (412)
T 2vd5_A           55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ---  131 (412)
T ss_dssp             HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE---
T ss_pred             hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe---
Confidence            34455678999999999999999999999999999999986432111 12345788999999999999999999988   


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                       ..+..|||||||+||+|.
T Consensus       132 -~~~~~~lVmE~~~gg~L~  149 (412)
T 2vd5_A          132 -DENYLYLVMEYYVGGDLL  149 (412)
T ss_dssp             -CSSEEEEEECCCCSCBHH
T ss_pred             -eCCEEEEEEcCCCCCcHH
Confidence             788999999999999984

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.59  E-value=4.7e-15  Score=114.95  Aligned_cols=86  Identities=23%  Similarity=0.267  Sum_probs=75.6

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.|++.+.||+|+||.||++.+..++..||+|.+......   .+.+.+|+.+++.++||||+++++++.    ..+..
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~----~~~~~   91 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI---DENVQREIINHRSLRHPNIVRFKEVIL----TPTHL   91 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS---CHHHHHHHHHHHHCCCTTBCCEEEEEE----CSSEE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc---cHHHHHHHHHHHhCCCCCCCcEEEEEe----eCCEE
Confidence            45799999999999999999999999999999998653322   245789999999999999999999987    77889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        92 ~lv~e~~~~~~L~  104 (361)
T 3uc3_A           92 AIIMEYASGGELY  104 (361)
T ss_dssp             EEEEECCCSCBHH
T ss_pred             EEEEEeCCCCCHH
Confidence            9999999999874

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.59  E-value=3.3e-15  Score=115.47  Aligned_cols=90  Identities=20%  Similarity=0.278  Sum_probs=75.9

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  182 (199)
                      ..++|++.+.||+|+||+||++.+..++..+|+|.+...... ....+.+.+|..++..+ +||||+++++++.    ..
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~----~~   96 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQ----TP   96 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEE----CS
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEE----eC
Confidence            346789999999999999999999999999999998754221 22345688899999988 6999999999998    78


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..|||||||+||+|.
T Consensus        97 ~~~~lv~E~~~gg~L~  112 (353)
T 3txo_A           97 DRLFFVMEFVNGGDLM  112 (353)
T ss_dssp             SEEEEEEECCCSCBHH
T ss_pred             CEEEEEEeCCCCCcHH
Confidence            8899999999999874

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.59  E-value=1.3e-15  Score=113.08  Aligned_cols=91  Identities=20%  Similarity=0.269  Sum_probs=77.1

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ...+.|++.+.||+|+||.||+|.+.  +..+|+|.+..........+.+.+|+.++++++||||+++++++.+  ...+
T Consensus         7 i~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~   82 (271)
T 3kmu_A            7 IDFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS--PPAP   82 (271)
T ss_dssp             CCGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECT--TTSS
T ss_pred             CCHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEcc--CCCC
Confidence            34567899999999999999999875  6789999987666666677889999999999999999999998862  1237


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus        83 ~~~lv~e~~~~~~L~   97 (271)
T 3kmu_A           83 HPTLITHWMPYGSLY   97 (271)
T ss_dssp             SCEEEEECCTTCBHH
T ss_pred             CeEeeecccCCCcHH
Confidence            789999999999984

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.59  E-value=1.9e-15  Score=116.69  Aligned_cols=98  Identities=26%  Similarity=0.327  Sum_probs=81.0

Q ss_pred             chhhhhhhcccccccceeecCccceeEEEEE-----ECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccc
Q psy360           97 VKEEERESMRGYLKFEEEIGRGSFKTVYRGL-----DTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVS  170 (199)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~lG~G~fg~v~~~~-----~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~  170 (199)
                      .....++...+.|++.+.||+|+||.||+|.     ...++..||+|.+... ......+.+.+|+.++.++ +||||++
T Consensus        12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc-CCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            3455677788899999999999999999998     4456689999999643 3445567899999999999 7999999


Q ss_pred             eeeeeeeeecCCceEEEEEeccCCCCCC
Q psy360          171 FYGYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       171 l~~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      +++++..   .....++|||||++|+|.
T Consensus        91 ~~~~~~~---~~~~~~iv~e~~~~g~L~  115 (359)
T 3vhe_A           91 LLGACTK---PGGPLMVIVEFCKFGNLS  115 (359)
T ss_dssp             EEEEECS---TTSCCEEEEECCTTEEHH
T ss_pred             eeeeeec---CCCceEEEEEecCCCcHH
Confidence            9998862   345689999999999874

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.59  E-value=1.4e-15  Score=122.17  Aligned_cols=90  Identities=27%  Similarity=0.369  Sum_probs=78.1

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+............+.+|+.++++++||||+++++++.    ..+.
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~----~~~~   95 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE----DSSS   95 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE----CSSE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEE----cCCE
Confidence            456799999999999999999999999999999998643322223467899999999999999999999987    7889


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .|+|||||++|+|.
T Consensus        96 ~~lv~e~~~~~~L~  109 (486)
T 3mwu_A           96 FYIVGELYTGGELF  109 (486)
T ss_dssp             EEEEECCCCSCBHH
T ss_pred             EEEEEEcCCCCcHH
Confidence            99999999999874

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.58  E-value=4.9e-15  Score=113.66  Aligned_cols=93  Identities=28%  Similarity=0.429  Sum_probs=79.2

Q ss_pred             hhhhcccccccceeecCccceeEEEEEEC-----CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeee
Q psy360          101 ERESMRGYLKFEEEIGRGSFKTVYRGLDT-----QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYW  175 (199)
Q Consensus       101 ~~~~~~~~~~~~~~lG~G~fg~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~  175 (199)
                      ......++|++.+.||+|+||.||+|.+.     .++..+|+|.+... ......+.+.+|+.++++++||||+++++++
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  119 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDNPNIVKLLGVC  119 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            34556788999999999999999999886     34588999998643 3455567899999999999999999999998


Q ss_pred             eeeecCCceEEEEEeccCCCCCC
Q psy360          176 EVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       176 ~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      .    ..+..++||||+++|+|.
T Consensus       120 ~----~~~~~~lv~e~~~~~~L~  138 (343)
T 1luf_A          120 A----VGKPMCLLFEYMAYGDLN  138 (343)
T ss_dssp             C----SSSSCEEEEECCTTCBHH
T ss_pred             c----cCCceEEEEecCCCCcHH
Confidence            7    678899999999999884

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.58  E-value=3.3e-15  Score=117.06  Aligned_cols=91  Identities=19%  Similarity=0.247  Sum_probs=76.7

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcC-CCCCccceeeeeeeeecC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  181 (199)
                      ...++|++.+.||+|+||+||++.+..++..+|+|.+........ ..+.+..|..++.++ +||||+++++++.    .
T Consensus        49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~----~  124 (396)
T 4dc2_A           49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ----T  124 (396)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEE----C
T ss_pred             CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEE----E
Confidence            344678999999999999999999999999999999976544332 345678899999877 8999999999988    7


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..|||||||+||+|.
T Consensus       125 ~~~~~lV~E~~~gg~L~  141 (396)
T 4dc2_A          125 ESRLFFVIEYVNGGDLM  141 (396)
T ss_dssp             SSEEEEEEECCTTCBHH
T ss_pred             CCEEEEEEEcCCCCcHH
Confidence            88999999999999874

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.58  E-value=3.5e-15  Score=115.24  Aligned_cols=89  Identities=19%  Similarity=0.250  Sum_probs=76.5

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      .+.|++.+.||+|+||.||++.+..++..+|+|.+....... ...+.+.+|+.+++.++||||+++++++.    ..+.
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----~~~~  115 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK----DNSN  115 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE----CSSE
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE----cCCE
Confidence            367899999999999999999999999999999986542211 13456889999999999999999999987    7789


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .|+||||++||+|.
T Consensus       116 ~~lv~e~~~gg~L~  129 (350)
T 1rdq_E          116 LYMVMEYVAGGEMF  129 (350)
T ss_dssp             EEEEEECCTTCBHH
T ss_pred             EEEEEcCCCCCcHH
Confidence            99999999999874

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.58  E-value=3.2e-15  Score=116.40  Aligned_cols=90  Identities=28%  Similarity=0.440  Sum_probs=76.2

Q ss_pred             hcccccccceeecCccceeEEEEEEC---CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDT---QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~---~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      ...+.|++.+.||+|+||.||+|.+.   .++..+|+|.+... ......+.+.+|+.++++++||||+++++++.    
T Consensus        42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----  116 (373)
T 2qol_A           42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----  116 (373)
T ss_dssp             CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC----
T ss_pred             cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCc-cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe----
Confidence            44567899999999999999999876   45778999998643 34556678999999999999999999999987    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      ..+..++||||+++|+|.
T Consensus       117 ~~~~~~lv~e~~~~~sL~  134 (373)
T 2qol_A          117 KSKPVMIVTEYMENGSLD  134 (373)
T ss_dssp             SSSSCEEEEECCTTCBHH
T ss_pred             eCCceEEEEeCCCCCcHH
Confidence            678899999999999884

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.58  E-value=1.4e-14  Score=108.99  Aligned_cols=91  Identities=22%  Similarity=0.359  Sum_probs=79.4

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ...+.|.+.+.||+|+||.||++.+..++..+|+|.+..... .....+.+.+|+.+++.++|+||+++++++.    ..
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----~~   87 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE----DN   87 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE----CS
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeec----cC
Confidence            345678999999999999999999999999999999865533 3445677899999999999999999999987    77


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..++||||+++|+|.
T Consensus        88 ~~~~lv~e~~~~~~L~  103 (294)
T 2rku_A           88 DFVFVVLELCRRRSLL  103 (294)
T ss_dssp             SEEEEEEECCTTCBHH
T ss_pred             CEEEEEEecCCCCCHH
Confidence            8899999999999874

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.58  E-value=4.2e-15  Score=111.47  Aligned_cols=89  Identities=22%  Similarity=0.425  Sum_probs=77.2

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+.|.+.+.||+|+||.||++.+..++..+++|.+..... ....+.+.+|+.++++++||||+++++++.    ..+.
T Consensus        20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----~~~~   94 (285)
T 3is5_A           20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFE----DYHN   94 (285)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEE----CSSE
T ss_pred             hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHhee----cCCe
Confidence            44678999999999999999999999999999999875432 223466889999999999999999999987    7788


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++|+|.
T Consensus        95 ~~lv~e~~~~~~L~  108 (285)
T 3is5_A           95 MYIVMETCEGGELL  108 (285)
T ss_dssp             EEEEECCCSCCBHH
T ss_pred             EEEEEEeCCCCcHH
Confidence            99999999999874

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.58  E-value=3.5e-15  Score=113.06  Aligned_cols=92  Identities=25%  Similarity=0.377  Sum_probs=77.8

Q ss_pred             hhhcccccccceeecCccceeEEEEEEC-----CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeee
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDT-----QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWE  176 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  176 (199)
                      +....++|++.+.||+|+||.||++.+.     .++..+|+|.+... ......+.+.+|+.++++++||||+++++++.
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   96 (314)
T 2ivs_A           18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-ASPSELRDLLSEFNVLKQVNHPHVIKLYGACS   96 (314)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             cccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC-CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEe
Confidence            3445678999999999999999999873     44578999998643 34556678999999999999999999999987


Q ss_pred             eeecCCceEEEEEeccCCCCCC
Q psy360          177 VTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       177 ~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                          ..+..++||||+++|+|.
T Consensus        97 ----~~~~~~lv~e~~~~~~L~  114 (314)
T 2ivs_A           97 ----QDGPLLLIVEYAKYGSLR  114 (314)
T ss_dssp             ----SSSSCEEEEECCTTCBHH
T ss_pred             ----cCCceEEEEeecCCCCHH
Confidence                677899999999999874

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.58  E-value=3.5e-15  Score=115.17  Aligned_cols=89  Identities=33%  Similarity=0.489  Sum_probs=71.7

Q ss_pred             hhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      .+...+.|++.+.||+|+||.||+|.+..++..||+|.+....    ..+.+.+|+.++++++||||+++++++.    .
T Consensus        48 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~----~  119 (349)
T 2w4o_A           48 RDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFE----T  119 (349)
T ss_dssp             CSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEE----C
T ss_pred             cccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEe----c
Confidence            3455678999999999999999999999999999999986432    3456889999999999999999999997    7


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..++||||+++|+|.
T Consensus       120 ~~~~~lv~e~~~~~~L~  136 (349)
T 2w4o_A          120 PTEISLVLELVTGGELF  136 (349)
T ss_dssp             SSEEEEEECCCCSCBHH
T ss_pred             CCeEEEEEEeCCCCCHH
Confidence            78899999999999874

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.58  E-value=9.6e-15  Score=113.68  Aligned_cols=81  Identities=27%  Similarity=0.483  Sum_probs=67.0

Q ss_pred             ceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEec
Q psy360          112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTEL  191 (199)
Q Consensus       112 ~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E~  191 (199)
                      .+.||+|+||.||+|.+..++..+|+|.+...  .....+.+.+|+.++++++||||+++++++.    ..+..+|||||
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~----~~~~~~lv~E~  167 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTR--GMKDKEEVKNEISVMNQLDHANLIQLYDAFE----SKNDIVLVMEY  167 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE----CSSEEEEEEEC
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEccc--ccccHHHHHHHHHHHHhCCCCCCCeEEEEEE----ECCEEEEEEeC
Confidence            57899999999999999999999999998643  3345677999999999999999999999997    77889999999


Q ss_pred             cCCCCCC
Q psy360          192 MTSGTLK  198 (199)
Q Consensus       192 ~~~G~L~  198 (199)
                      +++|+|.
T Consensus       168 ~~~~~L~  174 (373)
T 2x4f_A          168 VDGGELF  174 (373)
T ss_dssp             CTTCEEH
T ss_pred             CCCCcHH
Confidence            9999874

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.58  E-value=7.1e-15  Score=113.67  Aligned_cols=90  Identities=23%  Similarity=0.336  Sum_probs=79.3

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ...+.|++.+.||+|+||.||++.+..++..+|+|.+... ......+.+.+|+.++++++||||+++++++.    ..+
T Consensus        30 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~  104 (360)
T 3eqc_A           30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFY----SDG  104 (360)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEE----ETT
T ss_pred             cccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc-cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEE----ECC
Confidence            3456799999999999999999999999999999998643 34556678999999999999999999999987    678


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus       105 ~~~lv~e~~~~~~L~  119 (360)
T 3eqc_A          105 EISICMEHMDGGSLD  119 (360)
T ss_dssp             EEEEEECCCTTCBHH
T ss_pred             EEEEEEECCCCCCHH
Confidence            899999999999884

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.58  E-value=2.9e-15  Score=113.69  Aligned_cols=95  Identities=25%  Similarity=0.275  Sum_probs=78.8

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ...+.|++.+.||+|+||.||++.+..++..+|+|.+..... .......+.+|+.++.+++||||+++++++.......
T Consensus         9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   88 (311)
T 3ork_A            9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG   88 (311)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTE
T ss_pred             eecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCC
Confidence            345679999999999999999999999999999999975433 3344567899999999999999999999886433333


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ...|+||||++||+|.
T Consensus        89 ~~~~lv~e~~~g~~L~  104 (311)
T 3ork_A           89 PLPYIVMEYVDGVTLR  104 (311)
T ss_dssp             EEEEEEEECCCEEEHH
T ss_pred             cccEEEEecCCCCCHH
Confidence            4569999999999874

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.58  E-value=3.1e-15  Score=118.15  Aligned_cols=90  Identities=24%  Similarity=0.386  Sum_probs=74.5

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccC------HHHHHHHHHHHHHHhcCCCCCccceeeeeee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN------KAERARFREEAEMLKGLQHPNIVSFYGYWEV  177 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  177 (199)
                      ...+.|.+.+.||+|+||.||+|.+..++..+|+|.+......      ......+.+|+.++++++||||+++++++. 
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-  210 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-  210 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence            3457799999999999999999999999999999998754321      112335889999999999999999999875 


Q ss_pred             eecCCceEEEEEeccCCCCCC
Q psy360          178 TLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~~~~~~~~lv~E~~~~G~L~  198 (199)
                          .+..|+|||||++|+|.
T Consensus       211 ----~~~~~lv~e~~~~g~L~  227 (419)
T 3i6u_A          211 ----AEDYYIVLELMEGGELF  227 (419)
T ss_dssp             ----SSEEEEEEECCTTCBGG
T ss_pred             ----cCceEEEEEcCCCCcHH
Confidence                44579999999999985

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.58  E-value=2.9e-15  Score=114.01  Aligned_cols=97  Identities=30%  Similarity=0.466  Sum_probs=81.4

Q ss_pred             chhhhhhhcccccccceeecCccceeEEEEEEC-----CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccce
Q psy360           97 VKEEERESMRGYLKFEEEIGRGSFKTVYRGLDT-----QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSF  171 (199)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l  171 (199)
                      .....++...+.|++.+.||+|+||.||+|.+.     .++..+|+|.+... ........+.+|+.++++++|+||+++
T Consensus        15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~   93 (322)
T 1p4o_A           15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRL   93 (322)
T ss_dssp             CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-SCHHHHHHHHHHHHHGGGCCCTTBCCE
T ss_pred             cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCCEeee
Confidence            344566677889999999999999999999876     35678999998643 344556679999999999999999999


Q ss_pred             eeeeeeeecCCceEEEEEeccCCCCCC
Q psy360          172 YGYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       172 ~~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++++.    ..+..++||||+++|+|.
T Consensus        94 ~~~~~----~~~~~~lv~e~~~~~~L~  116 (322)
T 1p4o_A           94 LGVVS----QGQPTLVIMELMTRGDLK  116 (322)
T ss_dssp             EEEEC----SSSSCEEEEECCTTCBHH
T ss_pred             EEEEc----cCCccEEEEEeCCCCcHH
Confidence            99987    677889999999999884

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.58  E-value=6.2e-15  Score=112.79  Aligned_cols=88  Identities=26%  Similarity=0.292  Sum_probs=78.3

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.|++.+.||+|+||.||+|.+..++..+|+|.+..........+.+.+|+.++++++||||+++++++.    ..+..
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~   99 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCK----KKKRW   99 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE----ETTEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEee----cCCEE
Confidence            35789999999999999999999999999999998766555556677889999999999999999999987    67889


Q ss_pred             EEEEeccCCCCC
Q psy360          186 VLVTELMTSGTL  197 (199)
Q Consensus       186 ~lv~E~~~~G~L  197 (199)
                      ++||||+++++|
T Consensus       100 ~lv~e~~~~~~l  111 (331)
T 4aaa_A          100 YLVFEFVDHTIL  111 (331)
T ss_dssp             EEEEECCSEEHH
T ss_pred             EEEEecCCcchH
Confidence            999999998765

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.57  E-value=1.1e-14  Score=111.55  Aligned_cols=90  Identities=22%  Similarity=0.364  Sum_probs=79.2

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..+.|.+.+.||+|+||.||++.+..++..+|+|.+..... .....+.+.+|+.+++.++|+||+++++++.    ..+
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~  114 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE----DND  114 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE----CSS
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe----cCC
Confidence            45678999999999999999999999999999999875433 3445677999999999999999999999987    778


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus       115 ~~~lv~e~~~~~~L~  129 (335)
T 2owb_A          115 FVFVVLELCRRRSLL  129 (335)
T ss_dssp             EEEEEECCCTTCBHH
T ss_pred             eEEEEEecCCCCCHH
Confidence            899999999999874

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.57  E-value=3.9e-15  Score=121.40  Aligned_cols=91  Identities=25%  Similarity=0.338  Sum_probs=77.7

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ...+.|++.+.||+|+||.||+|.+..++..+|+|.+....... .....+.+|+.++..++||||+++++++.    ..
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~----~~  256 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE----TK  256 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE----CS
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEe----eC
Confidence            44567899999999999999999999999999999986543211 12356889999999999999999999987    77


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..||||||++||+|.
T Consensus       257 ~~l~lVmEy~~gg~L~  272 (576)
T 2acx_A          257 DALCLVLTLMNGGDLK  272 (576)
T ss_dssp             SEEEEEECCCCSCBHH
T ss_pred             CEEEEEEEcCCCCcHH
Confidence            8999999999999984

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.57  E-value=5.3e-15  Score=112.58  Aligned_cols=91  Identities=26%  Similarity=0.331  Sum_probs=75.6

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..||+|.+..... ....+.+.+|+.++++++||||+++++++..  .....
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~   83 (319)
T 4euu_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEE--TTTRH   83 (319)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--TTTCC
T ss_pred             CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeec--CCCce
Confidence            45679999999999999999999999999999999864322 1224567899999999999999999998862  13347


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++|+|.
T Consensus        84 ~~lv~e~~~~~~L~   97 (319)
T 4euu_A           84 KVLIMEFCPCGSLY   97 (319)
T ss_dssp             EEEEEECCTTCBHH
T ss_pred             EEEEEeCCCCCCHH
Confidence            89999999999874

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.57  E-value=2.5e-15  Score=120.39  Aligned_cols=90  Identities=28%  Similarity=0.394  Sum_probs=77.1

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..+.|.+.+.||+|+||.||+|.+..++..||+|.+....... ...+.+.+|+.+++.++||||+++++++.    ..+
T Consensus        14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~----~~~   89 (476)
T 2y94_A           14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS----TPS   89 (476)
T ss_dssp             EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEE----CSS
T ss_pred             eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE----ECC
Confidence            4467899999999999999999999999999999986543211 12457889999999999999999999987    678


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..|+||||++||+|.
T Consensus        90 ~~~lv~E~~~gg~L~  104 (476)
T 2y94_A           90 DIFMVMEYVSGGELF  104 (476)
T ss_dssp             EEEEEEECCSSEEHH
T ss_pred             EEEEEEeCCCCCcHH
Confidence            899999999999874

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.57  E-value=1.1e-15  Score=115.59  Aligned_cols=61  Identities=16%  Similarity=0.328  Sum_probs=51.1

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhcc
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI   69 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~   69 (199)
                      ...+.|||+.|||||++. ..++.++|+||+||++|+|++|+.||.. .+..+.+..+....+
T Consensus       190 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~-~~~~~~~~~i~~~~~  251 (311)
T 4aw0_A          190 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEGLIFAKIIKLEY  251 (311)
T ss_dssp             CBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHTCC
T ss_pred             cccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCC
Confidence            345779999999999887 5699999999999999999999999976 456667777776544

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.57  E-value=5.7e-15  Score=112.94  Aligned_cols=91  Identities=20%  Similarity=0.331  Sum_probs=70.7

Q ss_pred             hcccccccceeecCccceeEEEEEEC---CCCcEEEEEEecccccC--HHHHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDT---QTGVAVAWCELQEKKLN--KAERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~---~~~~~~a~k~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      ...+.|++.+.||+|+||.||++.+.   .++..+|+|.+......  ......+.+|+.+++.++||||+++++++.  
T Consensus        14 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--   91 (327)
T 3a62_A           14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ--   91 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE--
T ss_pred             CCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE--
Confidence            44578999999999999999999875   68899999998754322  223456788999999999999999999987  


Q ss_pred             ecCCceEEEEEeccCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~  198 (199)
                        ..+..|+||||++||+|.
T Consensus        92 --~~~~~~lv~e~~~~~~L~  109 (327)
T 3a62_A           92 --TGGKLYLILEYLSGGELF  109 (327)
T ss_dssp             --CSSCEEEEEECCTTEEHH
T ss_pred             --cCCEEEEEEeCCCCCcHH
Confidence              778899999999999874

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.57  E-value=1.2e-14  Score=108.36  Aligned_cols=88  Identities=34%  Similarity=0.546  Sum_probs=77.0

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..++|++.+.||+|+||.||+|.+..++..+++|.+......  ..+.+.+|+.++++++||||+++++++.    ..+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~----~~~~   80 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEIEIMKSLDHPNIIRLYETFE----DNTD   80 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHTCCCTTBCCEEEEEE----CSSE
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEe----cCCe
Confidence            456789999999999999999999999999999998654322  2456889999999999999999999987    7888


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++|+|.
T Consensus        81 ~~lv~e~~~~~~L~   94 (277)
T 3f3z_A           81 IYLVMELCTGGELF   94 (277)
T ss_dssp             EEEEEECCCSCBHH
T ss_pred             EEEEEeccCCCcHH
Confidence            99999999999874

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.57  E-value=5.4e-15  Score=110.79  Aligned_cols=91  Identities=30%  Similarity=0.499  Sum_probs=79.4

Q ss_pred             hhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          101 ERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       101 ~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      .++...+.|++.+.||+|+||.||+|.+..++..+|+|.+....   ...+.+.+|+.++++++||||+++++++.    
T Consensus         7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----   79 (288)
T 3kfa_A            7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCT----   79 (288)
T ss_dssp             TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEEC----
T ss_pred             cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEc----
Confidence            45566788999999999999999999999999999999986432   24567899999999999999999999987    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      ..+..++||||+++|+|.
T Consensus        80 ~~~~~~~v~e~~~~~~L~   97 (288)
T 3kfa_A           80 REPPFYIITEFMTYGNLL   97 (288)
T ss_dssp             SSSSEEEEEECCTTEEHH
T ss_pred             cCCCEEEEEEcCCCCcHH
Confidence            778899999999998874

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.56  E-value=6.5e-15  Score=110.82  Aligned_cols=91  Identities=33%  Similarity=0.476  Sum_probs=76.1

Q ss_pred             hcccccccceeecCccceeEEEEE----ECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGL----DTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~----~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      ...+.|++.+.||+|+||.||+|.    +..++..+|+|.+...  .....+.+.+|+.++++++||||+++++++..  
T Consensus         7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--   82 (295)
T 3ugc_A            7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYS--   82 (295)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECH--
T ss_pred             CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--
Confidence            345789999999999999999998    5668899999998643  45556789999999999999999999998752  


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                      ......++||||+++|+|.
T Consensus        83 ~~~~~~~lv~e~~~~~~L~  101 (295)
T 3ugc_A           83 AGRRNLKLIMEYLPYGSLR  101 (295)
T ss_dssp             HHHTSCEEEEECCTTCBHH
T ss_pred             CCCCceEEEEEeCCCCCHH
Confidence            1335689999999999984

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.56  E-value=4e-15  Score=113.37  Aligned_cols=90  Identities=29%  Similarity=0.479  Sum_probs=76.4

Q ss_pred             hhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      .....++|++.+.||+|+||.||+|.+ .++..+|+|.+....  ....+.+.+|+.+++.++||||+++++++.    .
T Consensus        34 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~  106 (321)
T 2qkw_B           34 LEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCD----E  106 (321)
T ss_dssp             CCCCCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCCTTBCCEEEECC----C
T ss_pred             HHHHHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEc----C
Confidence            344567899999999999999999985 468899999876432  234567899999999999999999999987    6


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..++||||+++|+|.
T Consensus       107 ~~~~~lv~e~~~~~~L~  123 (321)
T 2qkw_B          107 RNEMILIYKYMENGNLK  123 (321)
T ss_dssp             TTCCEEEEECCTTCBTG
T ss_pred             CCeEEEEEEcCCCCcHH
Confidence            78899999999999985

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.56  E-value=4.3e-15  Score=114.47  Aligned_cols=91  Identities=18%  Similarity=0.249  Sum_probs=75.3

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  181 (199)
                      ...+.|++.+.||+|+||+||+|.+..++..+|+|.+...... ....+.+..|..++..+ +||||+++++++.    .
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~----~   89 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ----T   89 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE----C
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEE----e
Confidence            3456789999999999999999999999999999998654221 11245577899988876 8999999999987    7


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..|+||||++||+|.
T Consensus        90 ~~~~~lv~E~~~gg~L~  106 (345)
T 1xjd_A           90 KENLFFVMEYLNGGDLM  106 (345)
T ss_dssp             SSEEEEEEECCTTCBHH
T ss_pred             CCEEEEEEeCCCCCcHH
Confidence            78899999999999984

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.56  E-value=4.9e-15  Score=118.99  Aligned_cols=91  Identities=31%  Similarity=0.514  Sum_probs=78.8

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ...+.|++.+.||+|+||.||+|.+..++..+|+|.+...... ....+.+.+|+.++++++||||+++++++.    ..
T Consensus        23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~----~~   98 (484)
T 3nyv_A           23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE----DK   98 (484)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEE----CS
T ss_pred             cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEE----eC
Confidence            4456799999999999999999999999999999998654332 223567899999999999999999999998    78


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..|+||||+++|+|.
T Consensus        99 ~~~~lv~e~~~~~~L~  114 (484)
T 3nyv_A           99 GYFYLVGEVYTGGELF  114 (484)
T ss_dssp             SEEEEEECCCCSCBHH
T ss_pred             CEEEEEEecCCCCCHH
Confidence            8999999999999874

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.56  E-value=1.4e-15  Score=114.89  Aligned_cols=60  Identities=25%  Similarity=0.386  Sum_probs=49.8

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhc
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      ...+.+||+.|||||++. ..++.++|+||+||+||||++|+.||.. .+..+.+..+....
T Consensus       182 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~-~~~~~~~~~i~~~~  242 (304)
T 3ubd_A          182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG-KDRKETMTMILKAK  242 (304)
T ss_dssp             CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCC
T ss_pred             cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC-cCHHHHHHHHHcCC
Confidence            345679999999999887 5699999999999999999999999976 45556666666543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.56  E-value=2.1e-14  Score=109.04  Aligned_cols=93  Identities=22%  Similarity=0.251  Sum_probs=76.9

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ...+.|++.+.||+|+||.||++.+..++..+|+|.+...  .....+.+.+|+.+++.++||||+++++++........
T Consensus        26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  103 (317)
T 2buj_A           26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKH  103 (317)
T ss_dssp             ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEE
T ss_pred             ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCc
Confidence            3456799999999999999999999999999999988542  44566789999999999999999999998864333456


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus       104 ~~~lv~e~~~~~~L~  118 (317)
T 2buj_A          104 EAWLLLPFFKRGTLW  118 (317)
T ss_dssp             EEEEEEECCTTCBHH
T ss_pred             eeEEEEEeCCCCcHH
Confidence            889999999999874

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.56  E-value=3.2e-14  Score=107.71  Aligned_cols=90  Identities=32%  Similarity=0.543  Sum_probs=76.5

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccc-cCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK-LNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+.... ......+.+.+|+.++++++|+||+++++++.    ..+
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----~~~  105 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI----EDN  105 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE----ETT
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE----cCC
Confidence            3457899999999999999999999999999999986533 24456678999999999999999999999987    678


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus       106 ~~~lv~e~~~~~~L~  120 (310)
T 2wqm_A          106 ELNIVLELADAGDLS  120 (310)
T ss_dssp             EEEEEEECCCSCBHH
T ss_pred             cEEEEEecCCCCCHH
Confidence            899999999999874

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.56  E-value=1.8e-14  Score=107.00  Aligned_cols=89  Identities=34%  Similarity=0.437  Sum_probs=75.2

Q ss_pred             hhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      +....+.|++.+.||+|+||.||++.+. ++..+|+|.+.......   +.+.+|+.++++++||||+++++++.    .
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~----~   76 (269)
T 4hcu_A            5 WVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLYGVCL----E   76 (269)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCH---HHHHHHHHHHHTCCCTTBCCEEEEEC----S
T ss_pred             EEeChhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCH---HHHHHHHHHHHhCCCCCEeeEEEEEe----c
Confidence            3345578999999999999999999976 46679999987554333   45889999999999999999999987    6


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..++||||+++|+|.
T Consensus        77 ~~~~~lv~e~~~~~~L~   93 (269)
T 4hcu_A           77 QAPICLVFEFMEHGCLS   93 (269)
T ss_dssp             SSSEEEEEECCTTCBHH
T ss_pred             CCceEEEEEeCCCCcHH
Confidence            77899999999999874

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.56  E-value=9e-15  Score=109.67  Aligned_cols=91  Identities=26%  Similarity=0.371  Sum_probs=79.2

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ...+.|++.+.||+|+||.||+|.+..++..+|+|.+..........+.+.+|+.++++++||||+++++++.    ..+
T Consensus        19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~   94 (287)
T 2wei_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE----DSS   94 (287)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEE----CSS
T ss_pred             HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEe----CCC
Confidence            4456899999999999999999999999999999998655443334567899999999999999999999987    778


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus        95 ~~~lv~e~~~~~~L~  109 (287)
T 2wei_A           95 SFYIVGELYTGGELF  109 (287)
T ss_dssp             EEEEEECCCCSCBHH
T ss_pred             eEEEEEEccCCCCHH
Confidence            899999999999873

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.55  E-value=7.7e-15  Score=111.81  Aligned_cols=90  Identities=24%  Similarity=0.468  Sum_probs=77.5

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH----HHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA----ERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      ..+.|++.+.||+|+||.||++.+..++..+|+|.+........    ..+.+.+|+.++++++||||+++++++.    
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----   85 (321)
T 2a2a_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYE----   85 (321)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE----
T ss_pred             hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEe----
Confidence            45678999999999999999999999999999999865432211    2466899999999999999999999987    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      ..+..++||||+++|+|.
T Consensus        86 ~~~~~~lv~e~~~~~~L~  103 (321)
T 2a2a_A           86 NRTDVVLILELVSGGELF  103 (321)
T ss_dssp             CSSEEEEEECCCCSCBHH
T ss_pred             cCCEEEEEEEcCCCCcHH
Confidence            778899999999999874

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.55  E-value=6.9e-15  Score=112.51  Aligned_cols=93  Identities=27%  Similarity=0.367  Sum_probs=78.6

Q ss_pred             hhhhcccccccceeecCccceeEEEEEECCCCc-----EEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeee
Q psy360          101 ERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGV-----AVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGY  174 (199)
Q Consensus       101 ~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~-----~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~  174 (199)
                      .++...+.|++.+.||+|+||.||+|.+..++.     .+|+|.+... ......+.+.+|+.+++.+ +||||++++++
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~  118 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST-AHADEKEALMSELKIMSHLGQHENIVNLLGA  118 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccc-cChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            345667889999999999999999999876554     7999998643 2445567899999999999 89999999999


Q ss_pred             eeeeecCCceEEEEEeccCCCCCC
Q psy360          175 WEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       175 ~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      +.    ..+..++||||+++|+|.
T Consensus       119 ~~----~~~~~~lv~e~~~~g~L~  138 (333)
T 2i1m_A          119 CT----HGGPVLVITEYCCYGDLL  138 (333)
T ss_dssp             EC----SSSSCEEEEECCTTEEHH
T ss_pred             Ee----cCCceEEEEecCCCCcHH
Confidence            87    677899999999999874

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.55  E-value=6.7e-15  Score=110.31  Aligned_cols=88  Identities=27%  Similarity=0.461  Sum_probs=74.6

Q ss_pred             cccccccceeecCccceeEEEEEECCCC-------cEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeee
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTG-------VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEV  177 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~-------~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  177 (199)
                      ..+.|++.+.||+|+||.||+|.+..++       ..+++|.+....  ....+.+.+|+.++++++||||+++++++. 
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-   82 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLSHKHLVLNYGVCV-   82 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSCCTTBCCEEEEEC-
T ss_pred             chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-
Confidence            4567899999999999999999887766       469999885432  234567999999999999999999999987 


Q ss_pred             eecCCceEEEEEeccCCCCCC
Q psy360          178 TLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~~~~~~~~lv~E~~~~G~L~  198 (199)
                         ..+..++||||+++|+|.
T Consensus        83 ---~~~~~~lv~e~~~~~~L~  100 (289)
T 4fvq_A           83 ---CGDENILVQEFVKFGSLD  100 (289)
T ss_dssp             ---CTTCCEEEEECCTTCBHH
T ss_pred             ---eCCCCEEEEECCCCCCHH
Confidence               677889999999999884

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.55  E-value=1.2e-14  Score=108.25  Aligned_cols=88  Identities=24%  Similarity=0.281  Sum_probs=76.7

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.|++.+.||+|+||.||+|.+..++..+|+|.+..... ....+.+.+|+.+++.++||||+++++++.    ..+..
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~   80 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRR----EGNIQ   80 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEE----ETTEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEE----cCCEE
Confidence            3578999999999999999999999999999999864432 234567899999999999999999999887    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        81 ~lv~e~~~~~~L~   93 (276)
T 2yex_A           81 YLFLEYCSGGELF   93 (276)
T ss_dssp             EEEEECCTTEEGG
T ss_pred             EEEEEecCCCcHH
Confidence            9999999999885

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.55  E-value=7.9e-15  Score=114.43  Aligned_cols=92  Identities=23%  Similarity=0.316  Sum_probs=77.5

Q ss_pred             hhhcccccccceeecCccceeEEEEEECCC-------CcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceee
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQT-------GVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYG  173 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~-------~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~  173 (199)
                      ++...+.|++.+.||+|+||.||+|.+...       +..+|+|.+... ........+.+|+.+++++ +||||+++++
T Consensus        64 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~  142 (382)
T 3tt0_A           64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLG  142 (382)
T ss_dssp             TBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhhee
Confidence            355667899999999999999999986533       357999998643 3455667899999999999 8999999999


Q ss_pred             eeeeeecCCceEEEEEeccCCCCCC
Q psy360          174 YWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       174 ~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++.    ..+..++||||+++|+|.
T Consensus       143 ~~~----~~~~~~lv~e~~~~g~L~  163 (382)
T 3tt0_A          143 ACT----QDGPLYVIVEYASKGNLR  163 (382)
T ss_dssp             EEC----SSSSCEEEEECCTTCBHH
T ss_pred             eec----cCCceEEEEEecCCCcHH
Confidence            987    678899999999999884

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.55  E-value=8.3e-15  Score=114.02  Aligned_cols=90  Identities=26%  Similarity=0.331  Sum_probs=68.9

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHH-HhcCCCCCccceeeeeeeeecCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEM-LKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ..++|++.+.||+|+||+||++.+..++..+|+|.+....... .....+.+|..+ ++.++||||+++++++.    ..
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~----~~  111 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ----TA  111 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEE----CS
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEE----eC
Confidence            3467899999999999999999999999999999997654432 234556777776 56789999999999987    78


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..|+||||++||+|.
T Consensus       112 ~~~~lv~E~~~gg~L~  127 (373)
T 2r5t_A          112 DKLYFVLDYINGGELF  127 (373)
T ss_dssp             SEEEEEEECCCSCBHH
T ss_pred             CEEEEEEeCCCCCcHH
Confidence            8999999999999874

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.55  E-value=2.3e-15  Score=113.87  Aligned_cols=53  Identities=28%  Similarity=0.482  Sum_probs=42.0

Q ss_pred             eeeeccCCCccccccccc----ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHH
Q psy360            8 VNIRTQRTPEFMAPEMYE----EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI   60 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~----~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~   60 (199)
                      .+...+||+.|||||++.    +.++.++|||||||+||||+||+.||....+....
T Consensus       190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~  246 (307)
T 3omv_A          190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI  246 (307)
T ss_dssp             ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH
T ss_pred             eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHH
Confidence            345679999999999874    34899999999999999999999999875554443

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.55  E-value=8.5e-15  Score=118.86  Aligned_cols=91  Identities=24%  Similarity=0.297  Sum_probs=77.3

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ...++|.+.+.||+|+||+||++.+..++..+|+|.+....... ...+.+.+|+.++.+++||||+++++++.    ..
T Consensus       182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~----~~  257 (543)
T 3c4z_A          182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE----TK  257 (543)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE----CS
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEe----eC
Confidence            34467888999999999999999999999999999986543211 12356889999999999999999999987    77


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..|+||||++||+|.
T Consensus       258 ~~l~lVmE~~~gg~L~  273 (543)
T 3c4z_A          258 TDLCLVMTIMNGGDIR  273 (543)
T ss_dssp             SEEEEEECCCTTCBHH
T ss_pred             CEEEEEEEeccCCCHH
Confidence            8899999999999984

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.55  E-value=9.9e-15  Score=108.97  Aligned_cols=90  Identities=29%  Similarity=0.494  Sum_probs=76.7

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..++|++.+.||+|+||.||+|.+..++..+|+|.+........ ....+.+|+.++++++||||+++++++.    ..+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~   82 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----DAT   82 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEE----CSS
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEe----cCC
Confidence            44678999999999999999999999999999999864332221 2456889999999999999999999987    778


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus        83 ~~~lv~e~~~~~~l~   97 (279)
T 3fdn_A           83 RVYLILEYAPLGTVY   97 (279)
T ss_dssp             EEEEEECCCTTEEHH
T ss_pred             EEEEEEecCCCCcHH
Confidence            899999999998873

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.55  E-value=9.2e-15  Score=111.36  Aligned_cols=93  Identities=19%  Similarity=0.284  Sum_probs=67.4

Q ss_pred             hhhcccccccceeecCccceeEEEEEECCCCc---EEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQTGV---AVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~---~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      .....+.|++.+.||+|+||.||+|.+..++.   .+|+|.+..........+.+.+|+.++++++||||+++++++.  
T Consensus        18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--   95 (323)
T 3qup_A           18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSL--   95 (323)
T ss_dssp             TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEE--
T ss_pred             cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceee--
Confidence            34556789999999999999999998776654   7999998755444455678999999999999999999999886  


Q ss_pred             ecCCce------EEEEEeccCCCCCC
Q psy360          179 LTKRKY------IVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~------~~lv~E~~~~G~L~  198 (199)
                        ....      .++||||+++|+|.
T Consensus        96 --~~~~~~~~~~~~~v~e~~~~~~L~  119 (323)
T 3qup_A           96 --RSRAKGRLPIPMVILPFMKHGDLH  119 (323)
T ss_dssp             --CC-------CEEEEEECCTTCBHH
T ss_pred             --ccccccCCCccEEEEEeccCCcHH
Confidence              3333      39999999999874

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.55  E-value=1.4e-14  Score=108.21  Aligned_cols=89  Identities=27%  Similarity=0.500  Sum_probs=76.7

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH----HHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA----ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      .+.|++.+.||+|+||.||++.+..++..+|+|.+........    ..+.+.+|+.++++++||||+++++++.    .
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----~   79 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFE----N   79 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE----C
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheec----C
Confidence            3578999999999999999999999999999999865432211    2467899999999999999999999987    7


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..++||||+++|+|.
T Consensus        80 ~~~~~lv~e~~~~~~L~   96 (283)
T 3bhy_A           80 KTDVVLILELVSGGELF   96 (283)
T ss_dssp             SSEEEEEEECCCSCBHH
T ss_pred             CCeEEEEEeecCCCcHH
Confidence            78899999999999874

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.54  E-value=4.8e-15  Score=117.93  Aligned_cols=91  Identities=21%  Similarity=0.280  Sum_probs=69.6

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ...+.|++.+.||+|+||.||++.+..++..||+|.+..... .......+.+|+.+++.++||||+++++++.    ..
T Consensus       145 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~  220 (446)
T 4ejn_A          145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ----TH  220 (446)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEE----ET
T ss_pred             CChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEe----eC
Confidence            345679999999999999999999999999999999875432 2334466889999999999999999999987    67


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..+||||||++|+|.
T Consensus       221 ~~~~lv~e~~~~~~L~  236 (446)
T 4ejn_A          221 DRLCFVMEYANGGELF  236 (446)
T ss_dssp             TEEEEEECCCSSCBHH
T ss_pred             CEEEEEEeeCCCCcHH
Confidence            8899999999999874

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.54  E-value=2.7e-14  Score=106.76  Aligned_cols=91  Identities=31%  Similarity=0.430  Sum_probs=74.1

Q ss_pred             hhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       100 ~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      ..+....+.|++.+.||+|+||.||++.+. ++..+|+|.+.......   +.+.+|+.++.+++|+||+++++++.   
T Consensus        17 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~---   89 (283)
T 3gen_A           17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVCT---   89 (283)
T ss_dssp             CTTBCCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCH---HHHHHHHHHHHTCCCTTBCCEEEEEC---
T ss_pred             CCccCCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCH---HHHHHHHHHHhcCCCCCEeeEEEEEe---
Confidence            345566778999999999999999999865 56679999987554333   45889999999999999999999987   


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                       ..+..++||||+++|+|.
T Consensus        90 -~~~~~~lv~e~~~~~~L~  107 (283)
T 3gen_A           90 -KQRPIFIITEYMANGCLL  107 (283)
T ss_dssp             -SSSSEEEEECCCTTCBHH
T ss_pred             -cCCCeEEEEeccCCCcHH
Confidence             778899999999999874

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.54  E-value=1.5e-14  Score=110.73  Aligned_cols=92  Identities=24%  Similarity=0.376  Sum_probs=76.3

Q ss_pred             hhhcccccccceeecCccceeEEEEEEC-------CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceee
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDT-------QTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYG  173 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~-------~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~  173 (199)
                      +....+.|++.+.||+|+||.||+|.+.       .++..+|+|.+... ......+.+.+|+.+++++ +||||+++++
T Consensus        30 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~  108 (334)
T 2pvf_A           30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLG  108 (334)
T ss_dssp             TBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC-CcHHHHHHHHHHHHHHHHhhcCCCEeeEEE
Confidence            3455678999999999999999999875       35678999998643 3455667899999999999 8999999999


Q ss_pred             eeeeeecCCceEEEEEeccCCCCCC
Q psy360          174 YWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       174 ~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++.    ..+..++||||+++|+|.
T Consensus       109 ~~~----~~~~~~lv~e~~~~~~L~  129 (334)
T 2pvf_A          109 ACT----QDGPLYVIVEYASKGNLR  129 (334)
T ss_dssp             EEC----SSSCCEEEEECCTTCBHH
T ss_pred             EEc----cCCceEEEEECCCCCcHH
Confidence            987    678899999999999874

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.54  E-value=1.1e-14  Score=110.24  Aligned_cols=93  Identities=27%  Similarity=0.338  Sum_probs=78.4

Q ss_pred             hhhhcccccccceeecCccceeEEEEEE-----CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeee
Q psy360          101 ERESMRGYLKFEEEIGRGSFKTVYRGLD-----TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGY  174 (199)
Q Consensus       101 ~~~~~~~~~~~~~~lG~G~fg~v~~~~~-----~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~  174 (199)
                      .+....+.|++.+.||+|+||.||+|.+     ..++..+|+|.+... ......+.+.+|+.+++++ +||||++++++
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~   95 (313)
T 1t46_A           17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHMNIVNLLGA   95 (313)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc-hhHHHHHHHHHHHHHHhhcccCCCeeeEEEE
Confidence            3455667899999999999999999985     456788999998643 2444567899999999999 89999999999


Q ss_pred             eeeeecCCceEEEEEeccCCCCCC
Q psy360          175 WEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       175 ~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      +.    ..+..++||||+++|+|.
T Consensus        96 ~~----~~~~~~lv~e~~~~~~L~  115 (313)
T 1t46_A           96 CT----IGGPTLVITEYCCYGDLL  115 (313)
T ss_dssp             EC----SSSSCEEEEECCTTEEHH
T ss_pred             Ee----cCCCcEEEEecCCCCCHH
Confidence            87    677889999999999874

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.54  E-value=9.2e-15  Score=114.60  Aligned_cols=91  Identities=26%  Similarity=0.331  Sum_probs=75.5

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..||+|.+..... ....+.+.+|+.++++++||||+++++++..  .....
T Consensus         7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--~~~~~   83 (396)
T 4eut_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEE--TTTRH   83 (396)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--TTTCC
T ss_pred             CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeecc--CCCCe
Confidence            45679999999999999999999999999999999864322 1224567899999999999999999998862  12347


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++|+|.
T Consensus        84 ~~lv~e~~~~g~L~   97 (396)
T 4eut_A           84 KVLIMEFCPCGSLY   97 (396)
T ss_dssp             EEEEECCCTTEEHH
T ss_pred             eEEEEecCCCCCHH
Confidence            89999999999874

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.54  E-value=2.1e-14  Score=108.55  Aligned_cols=88  Identities=26%  Similarity=0.388  Sum_probs=74.4

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+.|++.+.||+|+||.||++.+..++..+|+|.+....  ....+.+.+|+.++++++||||+++++++.    ..+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~   80 (304)
T 2jam_A            7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYE----STTH   80 (304)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEE----CSSE
T ss_pred             hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhcc----cCCE
Confidence            4567899999999999999999999999999999986432  223456889999999999999999999987    7788


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++|+|.
T Consensus        81 ~~lv~e~~~~~~L~   94 (304)
T 2jam_A           81 YYLVMQLVSGGELF   94 (304)
T ss_dssp             EEEEECCCCSCBHH
T ss_pred             EEEEEEcCCCccHH
Confidence            99999999999874

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.54  E-value=1.3e-14  Score=115.78  Aligned_cols=91  Identities=27%  Similarity=0.409  Sum_probs=76.4

Q ss_pred             hhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360           99 EEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus        99 ~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      ...++...+.|++.+.||+|+||.||+|.+. .+..||+|.+.....   ..+.+.+|+.++++++||||+++++++.  
T Consensus       180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~l~~~~~--  253 (454)
T 1qcf_A          180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVT--  253 (454)
T ss_dssp             TTCSBCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSB---CHHHHHHHHHHHTTCCCTTBCCEEEEEC--
T ss_pred             ccceeechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCc---cHHHHHHHHHHHhhCCCCCEeeEEEEEe--
Confidence            3456677788999999999999999999875 356799999875432   2467999999999999999999999874  


Q ss_pred             ecCCceEEEEEeccCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~  198 (199)
                         .+..+||||||++|+|.
T Consensus       254 ---~~~~~lv~e~~~~g~L~  270 (454)
T 1qcf_A          254 ---KEPIYIITEFMAKGSLL  270 (454)
T ss_dssp             ---SSSCEEEECCCTTCBHH
T ss_pred             ---CCccEEEEeecCCCcHH
Confidence               45689999999999984

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.54  E-value=1.1e-14  Score=116.12  Aligned_cols=90  Identities=28%  Similarity=0.351  Sum_probs=74.9

Q ss_pred             hhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       100 ~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      ..+....+.|++.+.||+|+||.||+|.+.  +..||+|.+....    ..+.+.+|+.++++++||||+++++++..  
T Consensus       186 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~--  257 (450)
T 1k9a_A          186 SGWALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVE--  257 (450)
T ss_dssp             TTCBCCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEEC--
T ss_pred             cccccChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEc--
Confidence            344566678999999999999999999875  5689999986543    34568999999999999999999998762  


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                       .....|||||||++|+|.
T Consensus       258 -~~~~~~iv~e~~~~g~L~  275 (450)
T 1k9a_A          258 -EKGGLYIVTEYMAKGSLV  275 (450)
T ss_dssp             -TTSCEEEEEECCTTCBHH
T ss_pred             -CCCceEEEEEecCCCcHH
Confidence             344799999999999984

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.54  E-value=1.5e-14  Score=110.39  Aligned_cols=90  Identities=28%  Similarity=0.388  Sum_probs=72.4

Q ss_pred             hcccccccceeecCccceeEEEEE-----ECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGL-----DTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~-----~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      ...++|++.+.||+|+||.||+|.     ...++..+|+|.+... ........+.+|+.++++++||||+++++++.  
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--  103 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSL--  103 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEc--
Confidence            456789999999999999999998     4567789999998632 34455667999999999999999999999987  


Q ss_pred             ecCCceEEEEEeccCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~  198 (199)
                        .....|+||||+++|+|.
T Consensus       104 --~~~~~~lv~e~~~~~~L~  121 (327)
T 2yfx_A          104 --QSLPRFILMELMAGGDLK  121 (327)
T ss_dssp             --SSSSCEEEEECCTTEEHH
T ss_pred             --CCCCcEEEEecCCCCcHH
Confidence              677889999999999874

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.54  E-value=1.4e-14  Score=110.56  Aligned_cols=85  Identities=24%  Similarity=0.320  Sum_probs=73.3

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      .++....||+|+||.||+|.+..++..||+|.+.....  ...+.+.+|+.++++++||||+++++++.    ..+..++
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~~l  119 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHFNVVEMYKSYL----VGEELWV  119 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CSHHHHHHHHHHHTTCCCTTBCCEEEEEE----ETTEEEE
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCcceEEEEEE----ECCEEEE
Confidence            46677899999999999999998999999999864322  23456889999999999999999999987    6788999


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      ||||+++|+|.
T Consensus       120 v~e~~~~~~L~  130 (321)
T 2c30_A          120 LMEFLQGGALT  130 (321)
T ss_dssp             EECCCCSCBHH
T ss_pred             EEecCCCCCHH
Confidence            99999999874

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.54  E-value=1.1e-14  Score=111.78  Aligned_cols=93  Identities=31%  Similarity=0.396  Sum_probs=75.6

Q ss_pred             hhhhcccccccceeecCccceeEEEEEE-----CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeee
Q psy360          101 ERESMRGYLKFEEEIGRGSFKTVYRGLD-----TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGY  174 (199)
Q Consensus       101 ~~~~~~~~~~~~~~lG~G~fg~v~~~~~-----~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~  174 (199)
                      .++...+.|++.+.||+|+||.||+|.+     ..++..+|+|.+.... .....+.+.+|+.++.++ +||||++++++
T Consensus        39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  117 (344)
T 1rjb_A           39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGA  117 (344)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            3456678899999999999999999986     3456789999986432 333456799999999999 89999999999


Q ss_pred             eeeeecCCceEEEEEeccCCCCCC
Q psy360          175 WEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       175 ~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      +.    ..+..++||||+++|+|.
T Consensus       118 ~~----~~~~~~lv~e~~~~g~L~  137 (344)
T 1rjb_A          118 CT----LSGPIYLIFEYCCYGDLL  137 (344)
T ss_dssp             EC----SSSSCEEEEECCTTCBHH
T ss_pred             Ee----eCCccEEEEecCCCCcHH
Confidence            87    677899999999999984

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.54  E-value=1.5e-14  Score=109.03  Aligned_cols=89  Identities=24%  Similarity=0.398  Sum_probs=74.7

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ...+.|++.+.||+|+||.||+|.+..++..+++|.+...  .....+.+.+|+.++..++||||+++++++.    ..+
T Consensus        16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~   89 (302)
T 2j7t_A           16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYY----HDG   89 (302)
T ss_dssp             CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEE----CC-
T ss_pred             CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC--CHHHHHHHHHHHHHHhcCCCCCEeeeeeeee----eCC
Confidence            3456799999999999999999999999999999998643  2223567889999999999999999999987    677


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus        90 ~~~lv~e~~~~~~l~  104 (302)
T 2j7t_A           90 KLWIMIEFCPGGAVD  104 (302)
T ss_dssp             CEEEEEECCTTEEHH
T ss_pred             eEEEEEEeCCCCcHH
Confidence            899999999998874

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.54  E-value=1.6e-14  Score=109.64  Aligned_cols=87  Identities=26%  Similarity=0.412  Sum_probs=71.4

Q ss_pred             hhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ....+.|++.+.||+|+||.||+|.+. ++..+|+|.+..........+.+.+|+.++++++||||+++++++.    ..
T Consensus        17 q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----~~   91 (311)
T 3niz_A           17 QGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH----SE   91 (311)
T ss_dssp             ECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEEC----CS
T ss_pred             cchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEc----cC
Confidence            345678999999999999999999975 4889999998654333334567889999999999999999999987    77


Q ss_pred             ceEEEEEeccCC
Q psy360          183 KYIVLVTELMTS  194 (199)
Q Consensus       183 ~~~~lv~E~~~~  194 (199)
                      +..++||||+++
T Consensus        92 ~~~~lv~e~~~~  103 (311)
T 3niz_A           92 RCLTLVFEFMEK  103 (311)
T ss_dssp             SCEEEEEECCSE
T ss_pred             CEEEEEEcCCCC
Confidence            889999999985

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.54  E-value=1e-14  Score=112.72  Aligned_cols=90  Identities=18%  Similarity=0.168  Sum_probs=75.9

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  182 (199)
                      ..++|++.+.||+|+||+||++.+..++..+|+|.+....... ...+.+..|..++..+ +||||+++++++.    ..
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~----~~   93 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ----TM   93 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEE----CS
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEE----cC
Confidence            3467899999999999999999999999999999986542211 2345678899999988 7999999999987    77


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..||||||++||+|.
T Consensus        94 ~~~~lv~E~~~gg~L~  109 (353)
T 2i0e_A           94 DRLYFVMEYVNGGDLM  109 (353)
T ss_dssp             SEEEEEEECCCSCBHH
T ss_pred             CEEEEEEeCCCCCcHH
Confidence            8999999999999884

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.53  E-value=8e-15  Score=112.60  Aligned_cols=87  Identities=31%  Similarity=0.398  Sum_probs=73.4

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      .+.|++.+.||+|+||.||+|.+..++..||+|.+........ ....+.+|+.+++.++||||+++++++.    ..+.
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~----~~~~   83 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVIT----TPTD   83 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEE----CSSE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEE----eCCE
Confidence            3578999999999999999999999999999999864322111 1346889999999999999999999987    7788


Q ss_pred             EEEEEeccCCCCC
Q psy360          185 IVLVTELMTSGTL  197 (199)
Q Consensus       185 ~~lv~E~~~~G~L  197 (199)
                      .++||||+ +|+|
T Consensus        84 ~~lv~E~~-~g~l   95 (336)
T 3h4j_B           84 IVMVIEYA-GGEL   95 (336)
T ss_dssp             EEEEECCC-CEEH
T ss_pred             EEEEEECC-CCcH
Confidence            99999999 5665

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.53  E-value=9.3e-15  Score=111.70  Aligned_cols=97  Identities=22%  Similarity=0.353  Sum_probs=80.2

Q ss_pred             hhhhhhhcccccccc-eeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeeee
Q psy360           98 KEEERESMRGYLKFE-EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYW  175 (199)
Q Consensus        98 ~~~~~~~~~~~~~~~-~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~  175 (199)
                      .....+...++|.+. +.||+|+||.||+|.+..++..+|+|.+............+.+|+.++..+. ||||+++++++
T Consensus        19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~   98 (327)
T 3lm5_A           19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY   98 (327)
T ss_dssp             CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            344445566667776 8899999999999999999999999998765443334567889999999995 79999999998


Q ss_pred             eeeecCCceEEEEEeccCCCCCC
Q psy360          176 EVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       176 ~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      .    ..+..++||||+++|+|.
T Consensus        99 ~----~~~~~~lv~e~~~~~~L~  117 (327)
T 3lm5_A           99 E----NTSEIILILEYAAGGEIF  117 (327)
T ss_dssp             E----CSSEEEEEEECCTTEEGG
T ss_pred             E----eCCeEEEEEEecCCCcHH
Confidence            7    788899999999999875

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.53  E-value=2.6e-14  Score=108.99  Aligned_cols=90  Identities=22%  Similarity=0.199  Sum_probs=72.3

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ...+.|++.+.||+|+||.||+|.+.  +..||+|.+...   ........+|+.++++++||||+++++++........
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   95 (322)
T 3soc_A           21 FQSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDV   95 (322)
T ss_dssp             ETTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSE
T ss_pred             cchhhchhhheecccCceEEEEEEEC--CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCc
Confidence            34467999999999999999999875  678999998543   2233456679999999999999999999874322345


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus        96 ~~~lv~e~~~~g~L~  110 (322)
T 3soc_A           96 DLWLITAFHEKGSLS  110 (322)
T ss_dssp             EEEEEEECCTTCBHH
T ss_pred             eEEEEEecCCCCCHH
Confidence            689999999999984

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.53  E-value=3.9e-14  Score=105.07  Aligned_cols=88  Identities=32%  Similarity=0.452  Sum_probs=74.7

Q ss_pred             hhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      +...+.|++.+.||+|+||.||++.+. ++..+|+|.+.......   +.+.+|+.++.+++||||+++++++.    ..
T Consensus         4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~----~~   75 (268)
T 3sxs_A            4 ELKREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSE---DEFFQEAQTMMKLSHPKLVKFYGVCS----KE   75 (268)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCH---HHHHHHHHHHHHCCCTTBCCEEEEEC----SS
T ss_pred             EechhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcH---HHHHHHHHHHHhCCCCCEeeEEEEEc----cC
Confidence            345678999999999999999999765 46679999987554333   45889999999999999999999987    77


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..++||||+++|+|.
T Consensus        76 ~~~~lv~e~~~~~~L~   91 (268)
T 3sxs_A           76 YPIYIVTEYISNGCLL   91 (268)
T ss_dssp             SSEEEEEECCTTCBHH
T ss_pred             CceEEEEEccCCCcHH
Confidence            8899999999999874

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.53  E-value=1.8e-14  Score=110.16  Aligned_cols=89  Identities=22%  Similarity=0.320  Sum_probs=72.3

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ...++|++.+.||+|+||.||+|.+..++..+|+|.+..........+.+.+|+.++++++||||+++++++.    ..+
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~  106 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIH----HNH  106 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEE----ETT
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEe----cCC
Confidence            3456799999999999999999999999999999998755444444567889999999999999999999987    678


Q ss_pred             eEEEEEeccCCCCC
Q psy360          184 YIVLVTELMTSGTL  197 (199)
Q Consensus       184 ~~~lv~E~~~~G~L  197 (199)
                      ..+|||||+++ +|
T Consensus       107 ~~~lv~e~~~~-~L  119 (329)
T 3gbz_A          107 RLHLIFEYAEN-DL  119 (329)
T ss_dssp             EEEEEEECCSE-EH
T ss_pred             EEEEEEecCCC-CH
Confidence            89999999984 54

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.53  E-value=3.9e-15  Score=114.21  Aligned_cols=58  Identities=29%  Similarity=0.517  Sum_probs=47.4

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...+.+||+.|||||++. ..|+.++|||||||++|||++|+.||.. .+..+.+..+..
T Consensus       226 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~-~~~~~~~~~i~~  284 (346)
T 4fih_A          226 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRD  284 (346)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT-SCHHHHHHHHHH
T ss_pred             cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-cCHHHHHHHHHc
Confidence            455789999999999887 5699999999999999999999999976 344445444443

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.53  E-value=2.7e-14  Score=114.13  Aligned_cols=91  Identities=23%  Similarity=0.242  Sum_probs=77.1

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee--cCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL--TKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~  182 (199)
                      ..++|++.+.||+|+||.||+|.+..++..||+|.+..........+.+.+|+.+++.++||||+++++++....  ...
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  139 (464)
T 3ttj_A           60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF  139 (464)
T ss_dssp             EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred             ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence            346789999999999999999999999999999999766556666788999999999999999999999886211  123


Q ss_pred             ceEEEEEeccCCC
Q psy360          183 KYIVLVTELMTSG  195 (199)
Q Consensus       183 ~~~~lv~E~~~~G  195 (199)
                      ...|||||||+++
T Consensus       140 ~~~~lv~E~~~~~  152 (464)
T 3ttj_A          140 QDVYLVMELMDAN  152 (464)
T ss_dssp             CEEEEEEECCSEE
T ss_pred             CeEEEEEeCCCCC
Confidence            5689999999875

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.53  E-value=1.5e-14  Score=107.92  Aligned_cols=89  Identities=33%  Similarity=0.568  Sum_probs=75.5

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      .+.|++.+.||+|+||.||+|.+..++..+|+|.+........ ..+.+.+|+.++++++||||+++++++.    ..+.
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~   85 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE----DSNY   85 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEE----CSSE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEc----cCCe
Confidence            3568999999999999999999999999999999864322111 2366889999999999999999999987    7788


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++|+|.
T Consensus        86 ~~lv~e~~~~~~L~   99 (278)
T 3cok_A           86 VYLVLEMCHNGEMN   99 (278)
T ss_dssp             EEEEEECCTTEEHH
T ss_pred             EEEEEecCCCCcHH
Confidence            99999999998764

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.53  E-value=1.6e-14  Score=111.24  Aligned_cols=84  Identities=32%  Similarity=0.495  Sum_probs=72.5

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+......      ..+|+.++.++ +||||+++++++.    ..+
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~----~~~   89 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYD----DGK   89 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEE----CSS
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEE----cCC
Confidence            456789999999999999999999999999999998654322      34688888887 7999999999987    788


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..|+|||||+||+|.
T Consensus        90 ~~~lv~E~~~gg~L~  104 (342)
T 2qr7_A           90 YVYVVTELMKGGELL  104 (342)
T ss_dssp             EEEEEECCCCSCBHH
T ss_pred             EEEEEEeCCCCCcHH
Confidence            999999999999874

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.53  E-value=2e-14  Score=109.54  Aligned_cols=89  Identities=25%  Similarity=0.382  Sum_probs=71.6

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccC------HHHHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN------KAERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..||+|.+......      ......+.+|+.++++++||||+++++++.  
T Consensus         8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--   85 (322)
T 2ycf_A            8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD--   85 (322)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE--
T ss_pred             hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc--
Confidence            456789999999999999999999999999999998654321      112345889999999999999999999886  


Q ss_pred             ecCCceEEEEEeccCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~  198 (199)
                        .. ..|+||||+++|+|.
T Consensus        86 --~~-~~~lv~e~~~~~~L~  102 (322)
T 2ycf_A           86 --AE-DYYIVLELMEGGELF  102 (322)
T ss_dssp             --SS-SEEEEEECCTTEETH
T ss_pred             --CC-ceEEEEecCCCCcHH
Confidence              33 379999999999884

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.53  E-value=1.1e-14  Score=110.77  Aligned_cols=86  Identities=33%  Similarity=0.516  Sum_probs=59.9

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.|++.+.||+|+||.||+|.+..++..+|+|.+.... .....+.+.+|+.++++++||||+++++++.    ..+..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----~~~~~   78 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIH----TENKL   78 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEEC----CTTEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEE----ECCeE
Confidence            357889999999999999999999999999999986432 1222356889999999999999999999987    67889


Q ss_pred             EEEEeccCCCCC
Q psy360          186 VLVTELMTSGTL  197 (199)
Q Consensus       186 ~lv~E~~~~G~L  197 (199)
                      ++||||+++ +|
T Consensus        79 ~lv~e~~~~-~L   89 (317)
T 2pmi_A           79 TLVFEFMDN-DL   89 (317)
T ss_dssp             EEEEECCCC-BH
T ss_pred             EEEEEecCC-CH
Confidence            999999984 55

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.53  E-value=1.1e-14  Score=111.94  Aligned_cols=90  Identities=11%  Similarity=0.205  Sum_probs=75.6

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH---------------HHHHHHHHHHHHhcCCCCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA---------------ERARFREEAEMLKGLQHPNI  168 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~---------------~~~~~~~E~~~l~~l~h~ni  168 (199)
                      ...++|++.+.||+|+||.||+|.+  ++..+|+|.+........               ..+.+.+|+.++.+++||||
T Consensus        28 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i  105 (348)
T 2pml_X           28 KYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC  105 (348)
T ss_dssp             EEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred             cccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence            3456899999999999999999998  889999999864322110               11678999999999999999


Q ss_pred             cceeeeeeeeecCCceEEEEEeccCCCCCCC
Q psy360          169 VSFYGYWEVTLTKRKYIVLVTELMTSGTLKT  199 (199)
Q Consensus       169 v~l~~~~~~~~~~~~~~~lv~E~~~~G~L~~  199 (199)
                      +++++++.    ..+..++||||+++|+|.+
T Consensus       106 ~~~~~~~~----~~~~~~lv~e~~~~~~L~~  132 (348)
T 2pml_X          106 LTCEGIIT----NYDEVYIIYEYMENDSILK  132 (348)
T ss_dssp             CCCSEEEE----SSSEEEEEEECCTTCBSSE
T ss_pred             ceEEEEEe----eCCeEEEEEeccCCCcHHH
Confidence            99999987    7789999999999999863

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.52  E-value=4.4e-15  Score=111.92  Aligned_cols=92  Identities=23%  Similarity=0.321  Sum_probs=60.7

Q ss_pred             hhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      +....+.|++.+.||+|+||.||++.+..++..+|+|.+.... .....+.+.+|+.++++++||||+++++++.    .
T Consensus        10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~   84 (303)
T 2vwi_A           10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIVSYYTSFV----V   84 (303)
T ss_dssp             ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEE----S
T ss_pred             cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh-cchhHHHHHHHHHHHhhcCCCCEeeEEEEEe----e
Confidence            4455678999999999999999999988889999999885432 2233466889999999999999999999987    6


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..++||||+++|+|.
T Consensus        85 ~~~~~lv~e~~~~~~L~  101 (303)
T 2vwi_A           85 KDELWLVMKLLSGGSVL  101 (303)
T ss_dssp             SSCEEEEEECCTTCBHH
T ss_pred             cCCcEEEehhccCCchH
Confidence            77899999999999874

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.52  E-value=4.2e-14  Score=107.31  Aligned_cols=88  Identities=24%  Similarity=0.290  Sum_probs=72.7

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..+.|++.+.||+|+||+||+|.+..++..||+|.+............+..|+..+.++ +|+||++++++|.    ..+
T Consensus        55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~----~~~  130 (311)
T 3p1a_A           55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE----EGG  130 (311)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE----ETT
T ss_pred             hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEE----eCC
Confidence            44679999999999999999999999999999999865544555555566666666555 8999999999997    788


Q ss_pred             eEEEEEeccCCCCC
Q psy360          184 YIVLVTELMTSGTL  197 (199)
Q Consensus       184 ~~~lv~E~~~~G~L  197 (199)
                      ..++||||+ +|+|
T Consensus       131 ~~~lv~e~~-~~~L  143 (311)
T 3p1a_A          131 ILYLQTELC-GPSL  143 (311)
T ss_dssp             EEEEEEECC-CCBH
T ss_pred             EEEEEEecc-CCCH
Confidence            999999999 5555

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.52  E-value=4.4e-14  Score=107.09  Aligned_cols=89  Identities=25%  Similarity=0.306  Sum_probs=77.4

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      .+.|++.+.||+|+||.||++.+..++..+|+|.+..... .....+.+.+|+.++++++||||+++++++.    ..+.
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~----~~~~  108 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGE----IDGQ  108 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE----ETTE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe----eCCe
Confidence            4679999999999999999999999999999999865433 3344577999999999999999999999987    6788


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++|+|.
T Consensus       109 ~~lv~e~~~~~~L~  122 (309)
T 2h34_A          109 LYVDMRLINGVDLA  122 (309)
T ss_dssp             EEEEEECCCCEEHH
T ss_pred             EEEEEEecCCCCHH
Confidence            99999999998874

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.52  E-value=2.9e-14  Score=107.46  Aligned_cols=91  Identities=31%  Similarity=0.426  Sum_probs=72.2

Q ss_pred             cccccccceeecCccceeEEEEE----ECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGL----DTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~----~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      ..+.|++.+.||+|+||.||+|.    +..++..+|+|.+.... .....+.+.+|+.++++++||||+++++++...  
T Consensus        19 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--   95 (302)
T 4e5w_A           19 EKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTED--   95 (302)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred             hhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC--
Confidence            34678999999999999999998    56788999999986432 222346789999999999999999999988621  


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      ..+..++||||+++|+|.
T Consensus        96 ~~~~~~lv~e~~~~~~L~  113 (302)
T 4e5w_A           96 GGNGIKLIMEFLPSGSLK  113 (302)
T ss_dssp             --CCEEEEEECCTTCBHH
T ss_pred             CCceEEEEEEeCCCCcHH
Confidence            236789999999999874

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.52  E-value=2.9e-14  Score=106.14  Aligned_cols=91  Identities=25%  Similarity=0.365  Sum_probs=76.9

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ...+.|++.+.||+|+||.||+|.+..++..+++|.+....... ...+.+.+|+.+++.++||||+++++++.    ..
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~   83 (276)
T 2h6d_A            8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS----TP   83 (276)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE----CS
T ss_pred             ceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEe----cC
Confidence            34467899999999999999999999999999999986432211 12456889999999999999999999987    77


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..++||||+++|+|.
T Consensus        84 ~~~~lv~e~~~~~~L~   99 (276)
T 2h6d_A           84 TDFFMVMEYVSGGELF   99 (276)
T ss_dssp             SEEEEEEECCCSCBHH
T ss_pred             CeEEEEEeccCCCcHH
Confidence            8899999999999874

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.52  E-value=2.1e-14  Score=107.87  Aligned_cols=96  Identities=29%  Similarity=0.396  Sum_probs=73.1

Q ss_pred             hhhhhhhcccccccce-eecCccceeEEEEEE--CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeee
Q psy360           98 KEEERESMRGYLKFEE-EIGRGSFKTVYRGLD--TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGY  174 (199)
Q Consensus        98 ~~~~~~~~~~~~~~~~-~lG~G~fg~v~~~~~--~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~  174 (199)
                      .+.+.....+.|++.. .||+|+||.||+|.+  ..++..+|+|.+..........+.+.+|+.+++.++||||++++++
T Consensus         7 ~~~~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   86 (291)
T 1xbb_A            7 RPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI   86 (291)
T ss_dssp             ----CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             CcceeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            3344445567788887 999999999999954  5667889999987544333446779999999999999999999998


Q ss_pred             eeeeecCCceEEEEEeccCCCCCC
Q psy360          175 WEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       175 ~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      +.     .+..++||||+++|+|.
T Consensus        87 ~~-----~~~~~lv~e~~~~~~L~  105 (291)
T 1xbb_A           87 CE-----AESWMLVMEMAELGPLN  105 (291)
T ss_dssp             EE-----SSSEEEEEECCTTEEHH
T ss_pred             EC-----CCCcEEEEEeCCCCCHH
Confidence            84     45678999999999874

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.52  E-value=3.3e-14  Score=109.66  Aligned_cols=85  Identities=25%  Similarity=0.350  Sum_probs=73.6

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      .+.|+..+.||+|+||.||+|.+..++..||+|.+....... ...+.+.+|+.++++++||||+++++++.    ..+.
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~----~~~~  128 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL----REHT  128 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE----ETTE
T ss_pred             hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEE----ECCe
Confidence            356888999999999999999999999999999986543333 34567899999999999999999999987    6788


Q ss_pred             EEEEEeccCC
Q psy360          185 IVLVTELMTS  194 (199)
Q Consensus       185 ~~lv~E~~~~  194 (199)
                      .++||||+.|
T Consensus       129 ~~lv~e~~~g  138 (348)
T 1u5q_A          129 AWLVMEYCLG  138 (348)
T ss_dssp             EEEEEECCSE
T ss_pred             EEEEEecCCC
Confidence            9999999984

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.52  E-value=3.1e-14  Score=106.60  Aligned_cols=88  Identities=27%  Similarity=0.430  Sum_probs=72.8

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH--HHH---HHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK--AER---ARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~--~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+.......  ...   +.+.+|+.++++++||||+++++++.   
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---   93 (287)
T 4f0f_A           17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH---   93 (287)
T ss_dssp             CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEET---
T ss_pred             hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeec---
Confidence            3467899999999999999999999999999999986433221  111   67899999999999999999999885   


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                       ...  ++||||+++|+|.
T Consensus        94 -~~~--~lv~e~~~~~~L~  109 (287)
T 4f0f_A           94 -NPP--RMVMEFVPCGDLY  109 (287)
T ss_dssp             -TTT--EEEEECCTTCBHH
T ss_pred             -CCC--eEEEEecCCCCHH
Confidence             333  6999999999873

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.52  E-value=4.2e-14  Score=107.21  Aligned_cols=100  Identities=24%  Similarity=0.316  Sum_probs=75.2

Q ss_pred             hhhhhhcccccccceeecCccceeEEEEEECC---CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeee
Q psy360           99 EEERESMRGYLKFEEEIGRGSFKTVYRGLDTQ---TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYW  175 (199)
Q Consensus        99 ~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~  175 (199)
                      ........+.|.+.+.||+|+||.||+|.+..   ++..+|+|.+..........+.+.+|+.++++++||||+++++++
T Consensus        26 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~  105 (313)
T 3brb_A           26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVC  105 (313)
T ss_dssp             TTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             HHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence            33444556789999999999999999997654   556899999876655666677899999999999999999999988


Q ss_pred             eeeec-CCceEEEEEeccCCCCCC
Q psy360          176 EVTLT-KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       176 ~~~~~-~~~~~~lv~E~~~~G~L~  198 (199)
                      ..... .....++||||+++|+|.
T Consensus       106 ~~~~~~~~~~~~~v~e~~~~~~L~  129 (313)
T 3brb_A          106 IEMSSQGIPKPMVILPFMKYGDLH  129 (313)
T ss_dssp             EC-------CEEEEEECCTTCBHH
T ss_pred             eeccccCCcccEEEEecccCCCHH
Confidence            62111 112569999999999874

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.52  E-value=3.8e-14  Score=108.29  Aligned_cols=78  Identities=27%  Similarity=0.391  Sum_probs=68.9

Q ss_pred             ceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeeeeeeeecCCceEEEEEe
Q psy360          112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       112 ~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      .+.||+|+||.||+|.+..++..+|+|.+...     ....+.+|+.++..+. ||||+++++++.    .....|+|||
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~----~~~~~~lv~e   86 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFH----DQLHTFLVME   86 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEE----CSSEEEEEEC
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEE----cCCEEEEEEE
Confidence            37899999999999999999999999998643     2345778999999997 999999999998    7888999999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |+++|+|.
T Consensus        87 ~~~~~~L~   94 (325)
T 3kn6_A           87 LLNGGELF   94 (325)
T ss_dssp             CCCSCBHH
T ss_pred             ccCCCcHH
Confidence            99999874

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.52  E-value=2.7e-14  Score=107.46  Aligned_cols=90  Identities=19%  Similarity=0.330  Sum_probs=75.3

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee-------
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT-------  178 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------  178 (199)
                      .+.|++.+.||+|+||.||+|.+..++..+|+|.+..   .....+.+.+|+.++++++||||+++++++...       
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   81 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM   81 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence            4578999999999999999999999999999999854   234557789999999999999999999987521       


Q ss_pred             --ecCCceEEEEEeccCCCCCC
Q psy360          179 --LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 --~~~~~~~~lv~E~~~~G~L~  198 (199)
                        .......|+||||+++|+|.
T Consensus        82 ~~~~~~~~~~lv~e~~~~~~L~  103 (303)
T 1zy4_A           82 TAVKKKSTLFIQMEYCENGTLY  103 (303)
T ss_dssp             ----CEEEEEEEEECCCSCBHH
T ss_pred             cccccCCceEEEEecCCCCCHH
Confidence              01356789999999999874

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.52  E-value=1.4e-14  Score=115.42  Aligned_cols=91  Identities=30%  Similarity=0.462  Sum_probs=76.1

Q ss_pred             hhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360           99 EEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus        99 ~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      ...++...+.|++.+.||+|+||.||+|.+.. +..||+|.+......   .+.+.+|+.++++++||||+++++++.  
T Consensus       176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hp~iv~~~~~~~--  249 (452)
T 1fmk_A          176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVS--  249 (452)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred             ccccccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEc--
Confidence            44566777889999999999999999999865 356999998754333   356899999999999999999999885  


Q ss_pred             ecCCceEEEEEeccCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~  198 (199)
                        . +..+||||||++|+|.
T Consensus       250 --~-~~~~iv~e~~~~gsL~  266 (452)
T 1fmk_A          250 --E-EPIYIVTEYMSKGSLL  266 (452)
T ss_dssp             --S-SSCEEEECCCTTCBHH
T ss_pred             --C-CceEEEehhhcCCCHH
Confidence              3 6689999999999984

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.52  E-value=3.2e-14  Score=106.13  Aligned_cols=91  Identities=33%  Similarity=0.491  Sum_probs=75.7

Q ss_pred             hhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360           99 EEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus        99 ~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      .+++....+.|++.+.||+|+||.||+|.+. .+..+|+|.+......   .+.+.+|+.++++++||||+++++++.  
T Consensus         5 ~~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~--   78 (279)
T 1qpc_A            5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVVT--   78 (279)
T ss_dssp             TCTTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred             hhhcccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCccc---HHHHHHHHHHHHhCCCcCcceEEEEEc--
Confidence            3456677789999999999999999999865 4567999998654333   356889999999999999999999874  


Q ss_pred             ecCCceEEEEEeccCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~  198 (199)
                         .+..++||||+++|+|.
T Consensus        79 ---~~~~~~v~e~~~~~~L~   95 (279)
T 1qpc_A           79 ---QEPIYIITEYMENGSLV   95 (279)
T ss_dssp             ---SSSCEEEEECCTTCBHH
T ss_pred             ---CCCcEEEEecCCCCCHH
Confidence               45589999999999874

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.52  E-value=2.2e-14  Score=107.38  Aligned_cols=89  Identities=30%  Similarity=0.505  Sum_probs=75.8

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      .+.|++.+.||+|+||.||+|.+..++..+|+|.+........ ..+.+.+|+.+++.++||||+++++++.    ..+.
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~   88 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH----DRKR   88 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE----CSSE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEE----cCCE
Confidence            4678999999999999999999999999999999864322111 2356889999999999999999999987    7788


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++|+|.
T Consensus        89 ~~lv~e~~~~~~L~  102 (284)
T 2vgo_A           89 IYLMLEFAPRGELY  102 (284)
T ss_dssp             EEEEECCCTTEEHH
T ss_pred             EEEEEEeCCCCcHH
Confidence            99999999998874

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.52  E-value=3e-14  Score=106.50  Aligned_cols=91  Identities=27%  Similarity=0.422  Sum_probs=74.8

Q ss_pred             hhhcccccccceeecCccceeEEEEEECC---CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQ---TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      .+...+.|++.+.||+|+||.||+|.+..   .+..+|+|.+... ......+.+.+|+.++++++||||+++++++.  
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--   86 (281)
T 1mp8_A           10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--   86 (281)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC--
T ss_pred             eEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc--
Confidence            34556789999999999999999998764   3557899987542 24455678999999999999999999999874  


Q ss_pred             ecCCceEEEEEeccCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~  198 (199)
                         .+..++||||+++|+|.
T Consensus        87 ---~~~~~lv~e~~~~~~L~  103 (281)
T 1mp8_A           87 ---ENPVWIIMELCTLGELR  103 (281)
T ss_dssp             ---SSSCEEEEECCTTEEHH
T ss_pred             ---cCccEEEEecCCCCCHH
Confidence               45679999999998874

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.52  E-value=3.2e-14  Score=107.96  Aligned_cols=87  Identities=22%  Similarity=0.327  Sum_probs=73.2

Q ss_pred             ccccccc-eeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCc
Q psy360          106 RGYLKFE-EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       106 ~~~~~~~-~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~  183 (199)
                      .+.|++. +.||+|+||.||+|.+..++..+|+|.+....  ....+.+.+|+.++.++ +||||+++++++.    ..+
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~----~~~   84 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFE----EED   84 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEE----ETT
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEe----eCC
Confidence            3556764 78999999999999999999999999986442  22345688999999885 7999999999987    678


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..|+||||+++|+|.
T Consensus        85 ~~~lv~e~~~~~~L~   99 (316)
T 2ac3_A           85 RFYLVFEKMRGGSIL   99 (316)
T ss_dssp             EEEEEEECCTTCBHH
T ss_pred             EEEEEEEcCCCCcHH
Confidence            999999999999874

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.51  E-value=3e-14  Score=105.53  Aligned_cols=87  Identities=36%  Similarity=0.479  Sum_probs=74.3

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ...+.|++.+.||+|+||.||++.+. ++..+|+|.+.......   +.+.+|+.++++++||||+++++++.    ..+
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~   76 (267)
T 3t9t_A            5 IDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLYGVCL----EQA   76 (267)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCH---HHHHHHHHHHHTCCCTTBCCEEEEEC----SSS
T ss_pred             EchhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCH---HHHHHHHHHHHhCCCCCEeeEEEEEc----cCC
Confidence            34567899999999999999999876 56789999987544333   56889999999999999999999987    677


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus        77 ~~~lv~e~~~~~~L~   91 (267)
T 3t9t_A           77 PICLVTEFMEHGCLS   91 (267)
T ss_dssp             SCEEEECCCTTCBHH
T ss_pred             CeEEEEeCCCCCcHH
Confidence            899999999999874

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.51  E-value=8.1e-14  Score=106.37  Aligned_cols=89  Identities=30%  Similarity=0.428  Sum_probs=75.4

Q ss_pred             ccccccceeecCccceeEEEEE----ECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGL----DTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~----~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      .+.|++.+.||+|+||.||++.    +..++..+|+|.+...  .....+.+.+|+.++++++|+||+++++++..  ..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~   97 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYG--PG   97 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SS
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEec--CC
Confidence            4678999999999999999998    4678899999998643  45556779999999999999999999998752  14


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..++||||+++|+|.
T Consensus        98 ~~~~~lv~e~~~~~~L~  114 (327)
T 3lxl_A           98 RQSLRLVMEYLPSGCLR  114 (327)
T ss_dssp             SCEEEEEEECCTTCBHH
T ss_pred             CceEEEEEeecCCCCHH
Confidence            56789999999999874

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.51  E-value=6.9e-15  Score=109.62  Aligned_cols=60  Identities=18%  Similarity=0.333  Sum_probs=42.2

Q ss_pred             eeeeccCCCcccccccccc-c-CCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhc
Q psy360            8 VNIRTQRTPEFMAPEMYEE-H-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~~-~-~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      ...+.+||+.|||||++.+ . ++.++|+||+||++|+|++|+.||.. .+....+..+....
T Consensus       167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~-~~~~~~~~~i~~~~  228 (275)
T 3hyh_A          167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV  228 (275)
T ss_dssp             --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHTC
T ss_pred             ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHcCC
Confidence            3456799999999998874 3 46899999999999999999999976 45555666665543

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.51  E-value=2.5e-14  Score=107.41  Aligned_cols=93  Identities=28%  Similarity=0.400  Sum_probs=76.4

Q ss_pred             hhhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeee
Q psy360           98 KEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEV  177 (199)
Q Consensus        98 ~~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  177 (199)
                      .....+...+.|++.+.||+|+||.||+|.+..   .+|+|.+..........+.+.+|+.++++++|+||+++++++  
T Consensus        15 ~~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--   89 (289)
T 3og7_A           15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS--   89 (289)
T ss_dssp             ---CCBCCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE--
T ss_pred             CCCCCccCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec--
Confidence            344456677889999999999999999998644   489999876655666778899999999999999999999976  


Q ss_pred             eecCCceEEEEEeccCCCCCC
Q psy360          178 TLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~~~~~~~~lv~E~~~~G~L~  198 (199)
                         ..+..++||||+++|+|.
T Consensus        90 ---~~~~~~lv~e~~~~~~L~  107 (289)
T 3og7_A           90 ---TAPQLAIVTQWCEGSSLY  107 (289)
T ss_dssp             ---CSSSCEEEEECCCEEEHH
T ss_pred             ---cCCccEEEEEecCCCcHH
Confidence               455679999999998873

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.51  E-value=3.7e-14  Score=107.05  Aligned_cols=88  Identities=24%  Similarity=0.433  Sum_probs=76.0

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.|++.+.||+|+||.||+|.+..++..+|+|.+..... ....+.+.+|+.+++.++||||+++++++.    ..+..
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~   95 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYL----KDTKL   95 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEE----ETTEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEe----cCCeE
Confidence            4568899999999999999999999999999999864432 223567899999999999999999999887    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        96 ~lv~e~~~~~~L~  108 (303)
T 3a7i_A           96 WIIMEYLGGGSAL  108 (303)
T ss_dssp             EEEEECCTTEEHH
T ss_pred             EEEEEeCCCCcHH
Confidence            9999999998874

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.51  E-value=4.5e-14  Score=112.64  Aligned_cols=92  Identities=18%  Similarity=0.195  Sum_probs=67.4

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee-cCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL-TKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~  183 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..||+|.+..........+.+.+|+.++++++|+||+++++++.... ....
T Consensus        51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  130 (458)
T 3rp9_A           51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD  130 (458)
T ss_dssp             SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence            346799999999999999999999999999999999765555566788999999999999999999999885211 1336


Q ss_pred             eEEEEEeccCCCCC
Q psy360          184 YIVLVTELMTSGTL  197 (199)
Q Consensus       184 ~~~lv~E~~~~G~L  197 (199)
                      ..|+||||+. |+|
T Consensus       131 ~~~lv~e~~~-~~L  143 (458)
T 3rp9_A          131 ELYVVLEIAD-SDF  143 (458)
T ss_dssp             CEEEEECCCS-EEH
T ss_pred             eEEEEEeccc-cch
Confidence            7999999986 444

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.51  E-value=5e-15  Score=113.78  Aligned_cols=60  Identities=23%  Similarity=0.421  Sum_probs=49.7

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhcc
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI   69 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~   69 (199)
                      +...+||+.|||||++. ..|+.++|||||||+||||++|+.||.. .+..+.+..+.....
T Consensus       182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~-~~~~~~~~~i~~~~~  242 (350)
T 4b9d_A          182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA-GSMKNLVLKIISGSF  242 (350)
T ss_dssp             HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC-SSHHHHHHHHHHTCC
T ss_pred             ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-cCHHHHHHHHHcCCC
Confidence            34678999999999887 4699999999999999999999999976 455666666666544

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.51  E-value=4.5e-14  Score=108.17  Aligned_cols=91  Identities=30%  Similarity=0.464  Sum_probs=75.2

Q ss_pred             hhcccccccceeecCccceeEEEEEECCC----CcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQT----GVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~----~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      +.....|++.+.||+|+||.||+|.+..+    +..+|+|.+... ........+.+|+.++++++||||+++++++.  
T Consensus        40 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--  116 (333)
T 1mqb_A           40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS--  116 (333)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC--
T ss_pred             cCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe--
Confidence            34456788899999999999999987644    345999998643 34455667999999999999999999999987  


Q ss_pred             ecCCceEEEEEeccCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~  198 (199)
                        ..+..++||||+++|+|.
T Consensus       117 --~~~~~~lv~e~~~~~~L~  134 (333)
T 1mqb_A          117 --KYKPMMIITEYMENGALD  134 (333)
T ss_dssp             --SSSSEEEEEECCTTEEHH
T ss_pred             --cCCCcEEEEeCCCCCcHH
Confidence              678899999999999874

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.51  E-value=5.8e-14  Score=105.63  Aligned_cols=91  Identities=24%  Similarity=0.348  Sum_probs=77.0

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccc---cC----HHHHHHHHHHHHHHhcCC-CCCccceeeee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK---LN----KAERARFREEAEMLKGLQ-HPNIVSFYGYW  175 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~---~~----~~~~~~~~~E~~~l~~l~-h~niv~l~~~~  175 (199)
                      ...+.|++.+.||+|+||.||+|.+..++..+|+|.+....   ..    ....+.+.+|+.+++++. ||||+++++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            34578999999999999999999999999999999986432   11    123467889999999995 99999999998


Q ss_pred             eeeecCCceEEEEEeccCCCCCC
Q psy360          176 EVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       176 ~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      .    ..+..++||||+++|+|.
T Consensus        94 ~----~~~~~~lv~e~~~~~~L~  112 (298)
T 1phk_A           94 E----TNTFFFLVFDLMKKGELF  112 (298)
T ss_dssp             E----CSSEEEEEEECCTTCBHH
T ss_pred             c----cCCeEEEEEeccCCCcHH
Confidence            7    788999999999999874

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.51  E-value=2.5e-14  Score=111.04  Aligned_cols=92  Identities=23%  Similarity=0.306  Sum_probs=69.8

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec--CC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT--KR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~  182 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..||+|.+..........+.+.+|+.+++.++||||+++++++.....  ..
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  102 (367)
T 1cm8_A           23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF  102 (367)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence            3567899999999999999999999999999999986555455567789999999999999999999998862110  11


Q ss_pred             ceEEEEEeccCCCCC
Q psy360          183 KYIVLVTELMTSGTL  197 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L  197 (199)
                      ...|+||||+ +++|
T Consensus       103 ~~~~lv~e~~-~~~L  116 (367)
T 1cm8_A          103 TDFYLVMPFM-GTDL  116 (367)
T ss_dssp             CCCEEEEECC-SEEH
T ss_pred             ceEEEEEecC-CCCH
Confidence            3569999999 6665

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.51  E-value=4.4e-14  Score=107.85  Aligned_cols=88  Identities=32%  Similarity=0.525  Sum_probs=72.1

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEE--EEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAV--AWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~--a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  182 (199)
                      .++|++.+.||+|+||.||++.+..++..+  ++|.+... ......+.+.+|+.+++++ +||||+++++++.    ..
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~----~~   98 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACE----HR   98 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEE----ET
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc-cchHHHHHHHHHHHHHHhccCCCchhhhceeee----eC
Confidence            367899999999999999999988887755  88887532 2333456789999999999 8999999999987    67


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..++||||+++|+|.
T Consensus        99 ~~~~lv~e~~~~~~L~  114 (327)
T 1fvr_A           99 GYLYLAIEYAPHGNLL  114 (327)
T ss_dssp             TEEEEEECCCTTCBHH
T ss_pred             CceEEEEecCCCCCHH
Confidence            8899999999999874

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.50  E-value=3.6e-14  Score=118.40  Aligned_cols=95  Identities=23%  Similarity=0.297  Sum_probs=76.4

Q ss_pred             hcccccccceeecCccceeEEEEEECC-CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQ-TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~-~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ...+.|++.+.||+|+||.||++.+.. ++..|++|.+... ........+.+|+.++.+++||||+++++++.......
T Consensus        77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  155 (681)
T 2pzi_A           77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG  155 (681)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS
T ss_pred             EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC
Confidence            345789999999999999999999876 7889999988643 24455677899999999999999999999987322111


Q ss_pred             -ceEEEEEeccCCCCCCC
Q psy360          183 -KYIVLVTELMTSGTLKT  199 (199)
Q Consensus       183 -~~~~lv~E~~~~G~L~~  199 (199)
                       ...||||||++||+|.+
T Consensus       156 ~~~~~lv~E~~~g~~L~~  173 (681)
T 2pzi_A          156 DPVGYIVMEYVGGQSLKR  173 (681)
T ss_dssp             CEEEEEEEECCCCEECC-
T ss_pred             CceeEEEEEeCCCCcHHH
Confidence             22699999999999863

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.50  E-value=2.9e-14  Score=107.02  Aligned_cols=83  Identities=28%  Similarity=0.402  Sum_probs=70.0

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.+.||+|+||.||+|.+ .++..+|+|.+..........+.+.+|+.++++++||||+++++++.    ..+..+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~   76 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH----TKKRLV   76 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE----CSSCEE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEc----cCCeEE
Confidence            4688899999999999999997 67889999998644322223356889999999999999999999987    678899


Q ss_pred             EEEeccCC
Q psy360          187 LVTELMTS  194 (199)
Q Consensus       187 lv~E~~~~  194 (199)
                      +||||+++
T Consensus        77 lv~e~~~~   84 (288)
T 1ob3_A           77 LVFEHLDQ   84 (288)
T ss_dssp             EEEECCSE
T ss_pred             EEEEecCC
Confidence            99999985

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.50  E-value=9.5e-14  Score=107.92  Aligned_cols=91  Identities=21%  Similarity=0.226  Sum_probs=75.7

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee--cCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL--TKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~  182 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+..........+.+.+|+.+++.++||||+++++++....  ...
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~  102 (371)
T 2xrw_A           23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  102 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred             hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence            346789999999999999999999999999999999765555566678999999999999999999999886211  112


Q ss_pred             ceEEEEEeccCCC
Q psy360          183 KYIVLVTELMTSG  195 (199)
Q Consensus       183 ~~~~lv~E~~~~G  195 (199)
                      ...|+||||++++
T Consensus       103 ~~~~lv~e~~~~~  115 (371)
T 2xrw_A          103 QDVYIVMELMDAN  115 (371)
T ss_dssp             CEEEEEEECCSEE
T ss_pred             cceEEEEEcCCCC
Confidence            3789999999853

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.50  E-value=1.9e-14  Score=116.92  Aligned_cols=91  Identities=31%  Similarity=0.475  Sum_probs=76.2

Q ss_pred             hhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360           99 EEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus        99 ~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      ...++...+.|++.+.||+|+||.||+|.+..+ ..||+|.+......   .+.|.+|+.++++++|+||+++++++.  
T Consensus       259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~--  332 (535)
T 2h8h_A          259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVS--  332 (535)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSEEEEEEEETTT-EEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred             ccceecchhhhhhheecccCCCeEEEEEEECCC-ceEEEEEeCCCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEe--
Confidence            445667778899999999999999999998653 56999998754433   356899999999999999999999885  


Q ss_pred             ecCCceEEEEEeccCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~  198 (199)
                        . +..|||||||++|+|.
T Consensus       333 --~-~~~~lv~e~~~~gsL~  349 (535)
T 2h8h_A          333 --E-EPIYIVTEYMSKGSLL  349 (535)
T ss_dssp             --S-SSCEEEECCCTTEEHH
T ss_pred             --e-ccceEeeehhcCCcHH
Confidence              3 6789999999999874

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.50  E-value=6.7e-14  Score=109.35  Aligned_cols=90  Identities=23%  Similarity=0.389  Sum_probs=68.2

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~  183 (199)
                      ..++|++.+.||+|+||.||+|.+..++..||+|.+..........+.+.+|+.++..+. ||||+++++++..  ....
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~--~~~~   84 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA--DNDR   84 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--TTSS
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec--CCCC
Confidence            346789999999999999999999999999999998765555666778899999999997 9999999998862  1344


Q ss_pred             eEEEEEeccCCCCC
Q psy360          184 YIVLVTELMTSGTL  197 (199)
Q Consensus       184 ~~~lv~E~~~~G~L  197 (199)
                      ..|+|||||++ +|
T Consensus        85 ~~~lv~e~~~~-~L   97 (388)
T 3oz6_A           85 DVYLVFDYMET-DL   97 (388)
T ss_dssp             CEEEEEECCSE-EH
T ss_pred             EEEEEecccCc-CH
Confidence            78999999984 44

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.50  E-value=1.4e-14  Score=110.45  Aligned_cols=97  Identities=25%  Similarity=0.389  Sum_probs=78.1

Q ss_pred             cchhhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeee
Q psy360           96 EVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYW  175 (199)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~  175 (199)
                      .+...+.....++|++.+.||+|+||.||+|.+ .++..+|+|.+..... ......+.+|+.+++.++||||+++++++
T Consensus        19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   96 (326)
T 3uim_A           19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFC   96 (326)
T ss_dssp             ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred             eecHHHHHHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccC-chHHHHHHHHHHHHHhccCCCccceEEEE
Confidence            345566677788999999999999999999974 4578899999864321 11223588999999999999999999998


Q ss_pred             eeeecCCceEEEEEeccCCCCCC
Q psy360          176 EVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       176 ~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      .    ..+..++||||+++|+|.
T Consensus        97 ~----~~~~~~lv~e~~~~~~L~  115 (326)
T 3uim_A           97 M----TPTERLLVYPYMANGSVA  115 (326)
T ss_dssp             C----CSSCCEEEEECCTTCBHH
T ss_pred             e----cCCceEEEEEeccCCCHH
Confidence            7    677889999999999874

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.50  E-value=9.4e-14  Score=110.08  Aligned_cols=92  Identities=24%  Similarity=0.265  Sum_probs=76.5

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee-cCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL-TKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~  183 (199)
                      ..++|++.+.||+|+||.||+|.+..++..||+|.+..........+.+.+|+.++++++|+||+++++++.... ...+
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~  103 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD  103 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence            456799999999999999999999999999999999765445556778999999999999999999999886211 1115


Q ss_pred             eEEEEEeccCCCCC
Q psy360          184 YIVLVTELMTSGTL  197 (199)
Q Consensus       184 ~~~lv~E~~~~G~L  197 (199)
                      ..|+||||+.+ +|
T Consensus       104 ~~~lv~e~~~~-~L  116 (432)
T 3n9x_A          104 ELYIVLEIADS-DL  116 (432)
T ss_dssp             CEEEEEECCSE-EH
T ss_pred             eEEEEEecCCc-CH
Confidence            78999999874 54

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.50  E-value=6.6e-14  Score=108.74  Aligned_cols=93  Identities=24%  Similarity=0.338  Sum_probs=73.0

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee--cCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL--TKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~  182 (199)
                      ..++|++.+.||+|+||.||+|.+..++..||+|.+..........+.+.+|+.+++.++||||+++++++....  ...
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence            346789999999999999999999999999999998755445556778999999999999999999999885210  122


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ...|+||||+ +++|.
T Consensus       107 ~~~~lv~e~~-~~~L~  121 (367)
T 2fst_X          107 NDVYLVTHLM-GADLN  121 (367)
T ss_dssp             CCCEEEEECC-CEECC
T ss_pred             CeEEEEeccc-CCCHH
Confidence            5689999999 67775

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.49  E-value=9.3e-14  Score=104.07  Aligned_cols=88  Identities=19%  Similarity=0.269  Sum_probs=71.1

Q ss_pred             hhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      +...+.|++.+.||+|+||.||++.+..++..+|+|.+..........+.+.++...++.++||||+++++++.    ..
T Consensus         3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~----~~   78 (290)
T 3fme_A            3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF----RE   78 (290)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE----CS
T ss_pred             cccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeee----cc
Confidence            34567899999999999999999999999999999998754333334444555666688889999999999987    67


Q ss_pred             ceEEEEEeccCC
Q psy360          183 KYIVLVTELMTS  194 (199)
Q Consensus       183 ~~~~lv~E~~~~  194 (199)
                      +..++||||+++
T Consensus        79 ~~~~lv~e~~~~   90 (290)
T 3fme_A           79 GDVWICMELMDT   90 (290)
T ss_dssp             SSEEEEEECCSE
T ss_pred             CCEEEEEehhcc
Confidence            889999999985

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.49  E-value=8.8e-14  Score=105.45  Aligned_cols=87  Identities=22%  Similarity=0.420  Sum_probs=69.7

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ...+.|++.+.||+|+||.||+|.+..++..+|+|.+.....    .+.+.+|+.++.+++||||+++++++.    ..+
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~   97 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD----LQEIIKEISIMQQCDSPHVVKYYGSYF----KNT   97 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC----CHHHHHHHHHHHTCCCTTBCCEEEEEE----ETT
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH----HHHHHHHHHHHHhCCCCCCccEEEEEE----eCC
Confidence            345678999999999999999999999999999999865432    345889999999999999999999887    678


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus        98 ~~~lv~e~~~~~~L~  112 (314)
T 3com_A           98 DLWIVMEYCGAGSVS  112 (314)
T ss_dssp             EEEEEEECCTTEEHH
T ss_pred             EEEEEeecCCCCCHH
Confidence            899999999998874

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.49  E-value=5.5e-16  Score=119.57  Aligned_cols=56  Identities=21%  Similarity=0.362  Sum_probs=45.5

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHH
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKV   64 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i   64 (199)
                      +...+||+.|||||++. +.++.++|||||||+||||+| |+.||........+...+
T Consensus       244 ~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i  301 (353)
T 4ase_A          244 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL  301 (353)
T ss_dssp             ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH
T ss_pred             eccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            34678999999999886 679999999999999999998 999998754444444333

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.49  E-value=4.8e-14  Score=106.91  Aligned_cols=97  Identities=26%  Similarity=0.331  Sum_probs=78.9

Q ss_pred             hhhhhhhcccccccceeecCccceeEEEEEE-----CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccce
Q psy360           98 KEEERESMRGYLKFEEEIGRGSFKTVYRGLD-----TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSF  171 (199)
Q Consensus        98 ~~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~-----~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l  171 (199)
                      ....+....+.|++.+.||+|+||.||+|.+     ..++..+|+|.+... ......+.+.+|+.++.++ +||||+++
T Consensus        18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC-CCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            3445566678899999999999999999985     346688999998643 3455567799999999999 69999999


Q ss_pred             eeeeeeeecCCceEEEEEeccCCCCCC
Q psy360          172 YGYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       172 ~~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++++..   .+...++||||+++|+|.
T Consensus        97 ~~~~~~---~~~~~~lv~e~~~~~~L~  120 (316)
T 2xir_A           97 LGACTK---PGGPLMVIVEFCKFGNLS  120 (316)
T ss_dssp             EEEECC---TTSCCEEEEECCTTEEHH
T ss_pred             EEEEec---CCCceEEEEEcCCCCcHH
Confidence            998862   345689999999999874

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.49  E-value=4.1e-14  Score=106.49  Aligned_cols=86  Identities=27%  Similarity=0.395  Sum_probs=69.9

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ++|++.+.||+|+||.||+|.+..++..+|+|.+..........+.+.+|+.++++++||||+++++++.    ..+..+
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~   78 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH----TENKLY   78 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEE----ETTEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEe----cCCceE
Confidence            4688999999999999999999999999999998654322223466889999999999999999999987    678899


Q ss_pred             EEEeccCCCCC
Q psy360          187 LVTELMTSGTL  197 (199)
Q Consensus       187 lv~E~~~~G~L  197 (199)
                      +||||+. |+|
T Consensus        79 lv~e~~~-~~L   88 (299)
T 2r3i_A           79 LVFEFLH-QDL   88 (299)
T ss_dssp             EEEECCS-EEH
T ss_pred             EEEEccc-CCH
Confidence            9999998 454

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.49  E-value=6.8e-14  Score=105.07  Aligned_cols=84  Identities=27%  Similarity=0.461  Sum_probs=70.7

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLV  188 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv  188 (199)
                      +.....||+|+||.||+|.+..++..||+|.+....  ....+.+.+|+.+++.++||||+++++++.    ..+..++|
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----~~~~~~lv   97 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFS----ENGFIKIF   97 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEE----ETTEEEEE
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEE----eCCcEEEE
Confidence            344568999999999999999999999999986432  234567899999999999999999999987    67889999


Q ss_pred             EeccCCCCCC
Q psy360          189 TELMTSGTLK  198 (199)
Q Consensus       189 ~E~~~~G~L~  198 (199)
                      |||+++|+|.
T Consensus        98 ~e~~~~~~L~  107 (295)
T 2clq_A           98 MEQVPGGSLS  107 (295)
T ss_dssp             EECCSEEEHH
T ss_pred             EEeCCCCCHH
Confidence            9999998874

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.49  E-value=4.3e-14  Score=116.97  Aligned_cols=81  Identities=30%  Similarity=0.419  Sum_probs=68.0

Q ss_pred             eeecCccceeEEEEEE--CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRGSFKTVYRGLD--TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~--~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      +.||+|+||.||+|.+  ..++..+|+|.+..........+.+.+|+.++.+++|||||++++++.     .+..+||||
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-----~~~~~lv~E  449 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-----AESWMLVME  449 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-----SSSEEEEEE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCEEEEEE
Confidence            4799999999999954  456788999999765444445677999999999999999999999885     345789999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      ||++|+|.
T Consensus       450 ~~~~g~L~  457 (635)
T 4fl3_A          450 MAELGPLN  457 (635)
T ss_dssp             CCTTEEHH
T ss_pred             ccCCCCHH
Confidence            99999874

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.49  E-value=6.6e-15  Score=112.55  Aligned_cols=55  Identities=25%  Similarity=0.309  Sum_probs=44.3

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      .++||+.|||||++. ..++.++|||||||++|||++|+.||... +....+..+..
T Consensus       215 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~-~~~~~~~~i~~  270 (336)
T 4g3f_A          215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY-FRGPLCLKIAS  270 (336)
T ss_dssp             CCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTT-CCSCCHHHHHH
T ss_pred             ccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC-CHHHHHHHHHc
Confidence            468999999999887 56999999999999999999999999763 33333344443

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.49  E-value=7.9e-14  Score=106.12  Aligned_cols=90  Identities=28%  Similarity=0.415  Sum_probs=73.4

Q ss_pred             ccccccceeecCccceeEEEEEE----CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLD----TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~----~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      .++|++.+.||+|+||.||++.+    ..++..+|+|.+... ......+.+.+|+.++++++||||+++++++.+  ..
T Consensus        30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~  106 (318)
T 3lxp_A           30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED--AG  106 (318)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TT
T ss_pred             HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEec--CC
Confidence            34569999999999999987754    457889999998744 345566789999999999999999999998862  13


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      ....++||||+++|+|.
T Consensus       107 ~~~~~lv~e~~~~~~L~  123 (318)
T 3lxp_A          107 AASLQLVMEYVPLGSLR  123 (318)
T ss_dssp             TTEEEEEECCCTTCBHH
T ss_pred             CceEEEEEecccCCcHH
Confidence            57889999999999874

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.48  E-value=1.9e-14  Score=110.41  Aligned_cols=89  Identities=21%  Similarity=0.343  Sum_probs=75.0

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH------HHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA------ERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+........      ..+.+.+|+.++++++||||+++++++.  
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~--   99 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE--   99 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE--
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe--
Confidence            45678999999999999999999999999999999875432211      2335778999999999999999999997  


Q ss_pred             ecCCceEEEEEeccCCC-CC
Q psy360          179 LTKRKYIVLVTELMTSG-TL  197 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G-~L  197 (199)
                        ..+..++||||+.+| +|
T Consensus       100 --~~~~~~lv~e~~~~g~~l  117 (335)
T 3dls_A          100 --NQGFFQLVMEKHGSGLDL  117 (335)
T ss_dssp             --CSSEEEEEEECCTTSCBH
T ss_pred             --eCCEEEEEEEeCCCCccH
Confidence              788999999999877 55

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.48  E-value=1.4e-14  Score=113.84  Aligned_cols=58  Identities=29%  Similarity=0.517  Sum_probs=47.2

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...+.+||+.|||||++. ..|+.++|||||||++|||++|+.||.. .+..+.+..+..
T Consensus       303 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~-~~~~~~~~~i~~  361 (423)
T 4fie_A          303 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRD  361 (423)
T ss_dssp             CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT-SCHHHHHHHHHH
T ss_pred             cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-cCHHHHHHHHHc
Confidence            455789999999999887 5699999999999999999999999976 344444444443

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.48  E-value=1.4e-14  Score=109.79  Aligned_cols=56  Identities=16%  Similarity=0.317  Sum_probs=45.8

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHH
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~   65 (199)
                      +...+||+.|||||++. +.++.++|||||||+||||+| |+.||.. .+..+....+.
T Consensus       204 ~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~-~~~~~~~~~i~  261 (308)
T 4gt4_A          204 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG-YSNQDVVEMIR  261 (308)
T ss_dssp             SSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT-CCHHHHHHHHH
T ss_pred             ecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCC-CCHHHHHHHHH
Confidence            44678999999999876 789999999999999999998 8999976 34445544444

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.47  E-value=1.5e-13  Score=106.13  Aligned_cols=92  Identities=20%  Similarity=0.195  Sum_probs=77.7

Q ss_pred             hhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-----CCCccceee
Q psy360           99 EEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-----HPNIVSFYG  173 (199)
Q Consensus        99 ~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~~  173 (199)
                      ........+.|++.+.||+|+||.||+|.+..++..+|+|.+..   .......+..|+.++..+.     ||||+++++
T Consensus        27 ~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~  103 (360)
T 3llt_A           27 WKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---IKKYTRSAKIEADILKKIQNDDINNNNIVKYHG  103 (360)
T ss_dssp             CCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred             eecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc---chhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence            33444567889999999999999999999999999999999863   2344566788999999886     999999999


Q ss_pred             eeeeeecCCceEEEEEeccCCCCCC
Q psy360          174 YWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       174 ~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++.    ..+..++||||+ +|+|.
T Consensus       104 ~~~----~~~~~~lv~e~~-~~~L~  123 (360)
T 3llt_A          104 KFM----YYDHMCLIFEPL-GPSLY  123 (360)
T ss_dssp             EEE----ETTEEEEEECCC-CCBHH
T ss_pred             eee----ECCeeEEEEcCC-CCCHH
Confidence            987    678899999999 88774

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.47  E-value=6.2e-14  Score=104.08  Aligned_cols=88  Identities=32%  Similarity=0.422  Sum_probs=68.6

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH--HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK--AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ..+.|++.+.||+|+||.||+|.+.  +..+|+|.+.......  ...+.+.+|+.+++.++||||+++++++.    ..
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~   78 (271)
T 3dtc_A            5 DFAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCL----KE   78 (271)
T ss_dssp             CTTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEEC----CC
T ss_pred             chhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe----cC
Confidence            3467899999999999999999875  6789999876432221  22467889999999999999999999987    67


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..++||||+++|+|.
T Consensus        79 ~~~~lv~e~~~~~~L~   94 (271)
T 3dtc_A           79 PNLCLVMEFARGGPLN   94 (271)
T ss_dssp             --CEEEEECCTTEEHH
T ss_pred             CceEEEEEcCCCCCHH
Confidence            7889999999999874

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.47  E-value=1.4e-13  Score=105.09  Aligned_cols=91  Identities=33%  Similarity=0.462  Sum_probs=73.7

Q ss_pred             hcccccccceeecCccceeEEEEEE----CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLD----TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~----~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      ...+.|++.+.||+|+||.||++.+    ..++..||+|.+...  .....+.+.+|+.++++++||||+++++++... 
T Consensus        38 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-  114 (326)
T 2w1i_A           38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-  114 (326)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC--
T ss_pred             cCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec-
Confidence            3456789999999999999999984    567899999998643  334557799999999999999999999987521 


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                       .....++||||+++|+|.
T Consensus       115 -~~~~~~lv~e~~~~~~L~  132 (326)
T 2w1i_A          115 -GRRNLKLIMEYLPYGSLR  132 (326)
T ss_dssp             ----CCEEEECCCTTCBHH
T ss_pred             -CCCceEEEEECCCCCCHH
Confidence             234789999999999874

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.47  E-value=1.6e-13  Score=103.33  Aligned_cols=89  Identities=28%  Similarity=0.423  Sum_probs=71.7

Q ss_pred             ccccccceeecCccceeEEEEEECC---CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQ---TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ...|++.+.||+|+||.||+|.+..   ....+|+|.+... ......+.+.+|+.++++++||||+++++++..   ..
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~   99 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR---SE   99 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC---SS
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEc---CC
Confidence            3468889999999999999998643   3446889888642 344556789999999999999999999998642   45


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..++||||+++|+|.
T Consensus       100 ~~~~~v~e~~~~~~L~  115 (298)
T 3f66_A          100 GSPLVVLPYMKHGDLR  115 (298)
T ss_dssp             SCCEEEEECCTTCBHH
T ss_pred             CceEEEEeCCCCCCHH
Confidence            6789999999999884

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.47  E-value=2.4e-13  Score=102.37  Aligned_cols=88  Identities=23%  Similarity=0.342  Sum_probs=69.4

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhc--CCCCCccceeeeeeeeecC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKG--LQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~  181 (199)
                      ...+.|++.+.||+|+||.||+|.+  ++..+|+|.+...     ....+..|.+++..  ++||||+++++++......
T Consensus         5 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~   77 (301)
T 3q4u_A            5 TVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHS   77 (301)
T ss_dssp             CCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETT
T ss_pred             cccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCC
Confidence            4567899999999999999999987  5778999998643     22345566666665  7999999999987643334


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      ....++||||+++|+|.
T Consensus        78 ~~~~~lv~e~~~~g~L~   94 (301)
T 3q4u_A           78 STQLWLITHYHEMGSLY   94 (301)
T ss_dssp             EEEEEEEECCCTTCBHH
T ss_pred             CceeEEehhhccCCCHH
Confidence            56789999999999884

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.47  E-value=2.2e-13  Score=105.71  Aligned_cols=90  Identities=27%  Similarity=0.402  Sum_probs=76.1

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccc--cCH----HHHHHHHHHHHHHhcC-CCCCccceeeeeee
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK--LNK----AERARFREEAEMLKGL-QHPNIVSFYGYWEV  177 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~--~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  177 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..||+|.+....  ...    ...+.+.+|+.++.++ +||||+++++++. 
T Consensus        92 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-  170 (365)
T 2y7j_A           92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE-  170 (365)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE-
T ss_pred             hhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe-
Confidence            4467899999999999999999999899999999986432  121    2245688999999999 7999999999987 


Q ss_pred             eecCCceEEEEEeccCCCCCC
Q psy360          178 TLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~~~~~~~~lv~E~~~~G~L~  198 (199)
                         .....++||||++||+|.
T Consensus       171 ---~~~~~~lv~e~~~g~~L~  188 (365)
T 2y7j_A          171 ---SSSFMFLVFDLMRKGELF  188 (365)
T ss_dssp             ---BSSEEEEEECCCTTCBHH
T ss_pred             ---eCCEEEEEEEeCCCCcHH
Confidence               678899999999999874

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.47  E-value=5.9e-14  Score=104.79  Aligned_cols=88  Identities=26%  Similarity=0.389  Sum_probs=72.9

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee-----
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL-----  179 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----  179 (199)
                      ....|++.+.||+|+||.||++.+..++..+|+|.+....      +.+.+|+.++++++||||+++++++....     
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET   82 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred             hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence            4467899999999999999999999899999999986432      24678999999999999999999875211     


Q ss_pred             -------cCCceEEEEEeccCCCCCC
Q psy360          180 -------TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 -------~~~~~~~lv~E~~~~G~L~  198 (199)
                             ......++||||+++|+|.
T Consensus        83 ~~~~~~~~~~~~~~lv~e~~~~~~L~  108 (284)
T 2a19_B           83 SSKNSSRSKTKCLFIQMEFCDKGTLE  108 (284)
T ss_dssp             ------CCEEEEEEEEECCCCSCBHH
T ss_pred             ccccccccCcceEEEEEeccCCCCHH
Confidence                   1245689999999999874

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.47  E-value=4.8e-14  Score=107.82  Aligned_cols=85  Identities=24%  Similarity=0.244  Sum_probs=72.5

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..||+|.+.....    .+.+.+|+.+++++ +|+||+++++++.    ..+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~----~~~   78 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGP----CGK   78 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEE----ETT
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEe----cCC
Confidence            34678999999999999999999999999999999864322    23478999999999 8999999999887    678


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+ +|+|.
T Consensus        79 ~~~lv~e~~-~~~L~   92 (330)
T 2izr_A           79 YNAMVLELL-GPSLE   92 (330)
T ss_dssp             EEEEEEECC-CCBHH
T ss_pred             ccEEEEEeC-CCCHH
Confidence            899999999 88874

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.46  E-value=1.1e-13  Score=106.68  Aligned_cols=93  Identities=20%  Similarity=0.273  Sum_probs=75.4

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec--CC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT--KR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~  182 (199)
                      ..+.|.+.+.||+|+||.||+|.+..++..||+|.+..........+.+.+|+.+++.++||||+++++++.....  ..
T Consensus        22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  101 (353)
T 3coi_A           22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  101 (353)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence            3467899999999999999999999999999999997655555566789999999999999999999998862110  01


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ...|+||||+. |+|.
T Consensus       102 ~~~~lv~e~~~-~~l~  116 (353)
T 3coi_A          102 YDFYLVMPFMQ-TDLQ  116 (353)
T ss_dssp             CCCEEEEECCS-EEGG
T ss_pred             eeEEEEecccc-CCHH
Confidence            23599999998 4553

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.46  E-value=1.7e-14  Score=108.92  Aligned_cols=55  Identities=18%  Similarity=0.429  Sum_probs=45.7

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ..+||+.|||||++. +.++.++|||||||+||||+| |+.||.. .+..+....+..
T Consensus       189 ~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~-~~~~~~~~~i~~  245 (299)
T 4asz_A          189 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ-LSNNEVIECITQ  245 (299)
T ss_dssp             TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT-SCHHHHHHHHHH
T ss_pred             ceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHc
Confidence            457999999999886 779999999999999999998 8999976 445555555554

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.46  E-value=1.2e-13  Score=107.41  Aligned_cols=86  Identities=21%  Similarity=0.308  Sum_probs=74.2

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+.|.+.+.||+|+||.||+|.+..++..||+|.+..........+.+.+|+.+++.++||||+++++++.    ..+.
T Consensus        40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~  115 (371)
T 4exu_A           40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFT----PASS  115 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC----SCSS
T ss_pred             ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhhee----ccCC
Confidence            456789999999999999999999999999999999765555666788999999999999999999999886    3332


Q ss_pred             ------EEEEEeccCC
Q psy360          185 ------IVLVTELMTS  194 (199)
Q Consensus       185 ------~~lv~E~~~~  194 (199)
                            .++||||+.+
T Consensus       116 ~~~~~~~~lv~e~~~~  131 (371)
T 4exu_A          116 LRNFYDFYLVMPFMQT  131 (371)
T ss_dssp             STTCCCCEEEEECCCE
T ss_pred             cccceeEEEEEccccc
Confidence                  3999999984

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.46  E-value=1.1e-13  Score=104.35  Aligned_cols=88  Identities=25%  Similarity=0.359  Sum_probs=71.3

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccC--HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN--KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      .+.|++.+.||+|+||.||++.+..++..+|+|.+......  ....+.+.+|+.++++++|+||+++++++..  ...+
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~   81 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN--EEKQ   81 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC--C---
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CCCC
Confidence            46789999999999999999999999999999998654321  1235678999999999999999999998741  1456


Q ss_pred             eEEEEEeccCCC
Q psy360          184 YIVLVTELMTSG  195 (199)
Q Consensus       184 ~~~lv~E~~~~G  195 (199)
                      ..++||||+++|
T Consensus        82 ~~~lv~e~~~~~   93 (305)
T 2wtk_C           82 KMYMVMEYCVCG   93 (305)
T ss_dssp             CEEEEEECCSEE
T ss_pred             eEEEEehhccCC
Confidence            789999999976

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.46  E-value=1.2e-13  Score=103.21  Aligned_cols=90  Identities=28%  Similarity=0.427  Sum_probs=73.5

Q ss_pred             hhcccccccceeecCccceeEEEEEECC---CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQ---TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      ....++|++.+.||+|+||.||+|.+..   ++..+|+|.+... ......+.+.+|+.++++++||||+++++++.   
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---   83 (281)
T 3cc6_A            8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD-CTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE---   83 (281)
T ss_dssp             SCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTT-SCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC---
T ss_pred             eecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccc-cCchHHHHHHHHHHHHHhCCCCCcceEEEEEc---
Confidence            3456789999999999999999998643   3456999988643 24455678999999999999999999999875   


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                        .+..++||||+++|+|.
T Consensus        84 --~~~~~~v~e~~~~~~L~  100 (281)
T 3cc6_A           84 --EEPTWIIMELYPYGELG  100 (281)
T ss_dssp             --SSSCEEEEECCTTCBHH
T ss_pred             --CCCCEEEEecCCCCCHH
Confidence              34568999999999874

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.46  E-value=2.9e-13  Score=102.65  Aligned_cols=90  Identities=20%  Similarity=0.259  Sum_probs=69.5

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee------
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT------  178 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  178 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+...  .....+.+.+|+.++++++||||+++++++...      
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   86 (320)
T 2i6l_A            9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD   86 (320)
T ss_dssp             ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred             cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence            456789999999999999999999999999999988543  445567799999999999999999999987311      


Q ss_pred             ----ecCCceEEEEEeccCCCCC
Q psy360          179 ----LTKRKYIVLVTELMTSGTL  197 (199)
Q Consensus       179 ----~~~~~~~~lv~E~~~~G~L  197 (199)
                          .......++||||++ |+|
T Consensus        87 ~~~~~~~~~~~~lv~e~~~-~~L  108 (320)
T 2i6l_A           87 DVGSLTELNSVYIVQEYME-TDL  108 (320)
T ss_dssp             ----CCSCSEEEEEEECCS-EEH
T ss_pred             ccccccccCceeEEeeccC-CCH
Confidence                124578899999998 455

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.46  E-value=1.3e-13  Score=105.14  Aligned_cols=97  Identities=25%  Similarity=0.398  Sum_probs=77.8

Q ss_pred             hhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeee
Q psy360           99 EEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEV  177 (199)
Q Consensus        99 ~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  177 (199)
                      ........+.|++.+.||+|+||.||+|.+..++..+|+|.+.....   ..+.+.+|+.++.++ +||||+++++++..
T Consensus        16 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIK   92 (326)
T ss_dssp             CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---TTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred             chhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc---cHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence            33444566789999999999999999999999999999999864322   235688999999999 79999999998862


Q ss_pred             ee--cCCceEEEEEeccCCCCCC
Q psy360          178 TL--TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~--~~~~~~~lv~E~~~~G~L~  198 (199)
                      ..  ...+..++||||+++|+|.
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~  115 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEFCGAGSVT  115 (326)
T ss_dssp             CC--CCCCEEEEEEECCTTEEHH
T ss_pred             ccCccccceEEEEEEcCCCCcHH
Confidence            11  1156889999999998874

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.45  E-value=2.5e-13  Score=101.72  Aligned_cols=87  Identities=29%  Similarity=0.483  Sum_probs=71.0

Q ss_pred             ccccccce-eecCccceeEEEEEEC--CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          106 RGYLKFEE-EIGRGSFKTVYRGLDT--QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       106 ~~~~~~~~-~lG~G~fg~v~~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      .+++.+.. .||+|+||.||+|.+.  .++..+|+|.+... ......+.+.+|+.++++++||||+++++++.     .
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~   81 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-----A   81 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----S
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc-cchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-----C
Confidence            45566665 9999999999999754  46788999998643 34556678999999999999999999999884     3


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..++||||+++|+|.
T Consensus        82 ~~~~lv~e~~~~~~L~   97 (287)
T 1u59_A           82 EALMLVMEMAGGGPLH   97 (287)
T ss_dssp             SSEEEEEECCTTEEHH
T ss_pred             CCcEEEEEeCCCCCHH
Confidence            5589999999998874

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.45  E-value=2.8e-14  Score=109.15  Aligned_cols=57  Identities=21%  Similarity=0.392  Sum_probs=44.7

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHHh
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ....+||+.|||||++. +.++.++|||||||+||||+| |+.||... +..+....+..
T Consensus       217 ~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~-~~~~~~~~i~~  275 (329)
T 4aoj_A          217 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL-SNTEAIDCITQ  275 (329)
T ss_dssp             ---CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS-CHHHHHHHHHH
T ss_pred             cCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC-CHHHHHHHHHc
Confidence            34678999999999887 679999999999999999999 89999764 44445444443

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.45  E-value=3.4e-14  Score=110.06  Aligned_cols=57  Identities=19%  Similarity=0.455  Sum_probs=45.1

Q ss_pred             eeeccCCCcccccccccc--cCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360            9 NIRTQRTPEFMAPEMYEE--HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~~--~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      .+..+||+.|||||++.+  .++.++|+||+||++|||++|+.||....+....+..+.
T Consensus       203 ~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~  261 (361)
T 4f9c_A          203 VAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIM  261 (361)
T ss_dssp             ---CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHH
T ss_pred             ccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Confidence            345689999999997753  589999999999999999999999987666555444443

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.45  E-value=6e-15  Score=113.09  Aligned_cols=92  Identities=18%  Similarity=0.172  Sum_probs=67.3

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc------CHHHHHHHHHHHHHHhcCC---------CCCcc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL------NKAERARFREEAEMLKGLQ---------HPNIV  169 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~~E~~~l~~l~---------h~niv  169 (199)
                      ..+.|++.+.||+|+||+||+|.+  ++..||+|.+.....      .....+.+.+|+.+++.++         |+||+
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv   95 (336)
T 2vuw_A           18 PTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI   95 (336)
T ss_dssp             CHHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred             ccccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence            346789999999999999999987  678999999875432      1112356888888888875         77777


Q ss_pred             ceeeeeeee--------------------------ecCCceEEEEEeccCCCCCC
Q psy360          170 SFYGYWEVT--------------------------LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       170 ~l~~~~~~~--------------------------~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++.+.+...                          ....+..|||||||++|+|.
T Consensus        96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll  150 (336)
T 2vuw_A           96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDL  150 (336)
T ss_dssp             CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEET
T ss_pred             hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccH
Confidence            766643210                          00167899999999999653

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.45  E-value=2.3e-13  Score=102.81  Aligned_cols=84  Identities=25%  Similarity=0.396  Sum_probs=69.3

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccc--cCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK--LNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +...+.||+|+||.||+|.+  ++..+|+|.+....  ......+.+.+|+.++++++||||+++++++.    ..+..+
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----~~~~~~  106 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS----DGDDLC  106 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEEC----SSSSCE
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEe----cCCceE
Confidence            33448999999999999986  56789999886432  12334577999999999999999999999987    677889


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus       107 lv~e~~~~~~L~  118 (307)
T 2nru_A          107 LVYVYMPNGSLL  118 (307)
T ss_dssp             EEEECCTTCBHH
T ss_pred             EEEEecCCCcHH
Confidence            999999999874

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.45  E-value=3.5e-13  Score=102.86  Aligned_cols=86  Identities=20%  Similarity=0.361  Sum_probs=73.5

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeeeeeeeecCCce
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~  184 (199)
                      .+.|++.+.||+|+||.||+|.+..++..+|+|.+....     .+.+.+|+.++.++. ||||+++++++..  .....
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~--~~~~~  107 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKD--PVSRT  107 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEEC--TTTCC
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-----hHHHHHHHHHHHHcCCCCCEEEeeeeecc--CCCCc
Confidence            367899999999999999999999999999999986322     356889999999997 9999999998862  12667


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++|+|.
T Consensus       108 ~~lv~e~~~~~~l~  121 (330)
T 3nsz_A          108 PALVFEHVNNTDFK  121 (330)
T ss_dssp             EEEEEECCCCCCHH
T ss_pred             eEEEEeccCchhHH
Confidence            89999999999874

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.45  E-value=1.4e-13  Score=105.97  Aligned_cols=89  Identities=20%  Similarity=0.258  Sum_probs=71.7

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec----C
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT----K  181 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----~  181 (199)
                      .+.|++.+.||+|+||.||+|.+..++..+|+|.+............+.+|+.+++.++||||+++++++.....    .
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            357899999999999999999999999999999986544333334567899999999999999999998863110    1


Q ss_pred             CceEEEEEeccCC
Q psy360          182 RKYIVLVTELMTS  194 (199)
Q Consensus       182 ~~~~~lv~E~~~~  194 (199)
                      .+..++||||+++
T Consensus        96 ~~~~~lv~e~~~~  108 (351)
T 3mi9_A           96 KGSIYLVFDFCEH  108 (351)
T ss_dssp             -CEEEEEEECCSE
T ss_pred             CceEEEEEeccCC
Confidence            4578999999985

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.45  E-value=1.2e-13  Score=113.93  Aligned_cols=87  Identities=29%  Similarity=0.489  Sum_probs=69.5

Q ss_pred             ccccccce-eecCccceeEEEEEEC--CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          106 RGYLKFEE-EIGRGSFKTVYRGLDT--QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       106 ~~~~~~~~-~lG~G~fg~v~~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      .+.+.+.. .||+|+||.||+|.+.  .++..||+|.+.... .....+.+.+|+.++++++|||||+++++|.    . 
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~----~-  407 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQ----A-  407 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEE----S-
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEec----c-
Confidence            34444444 7999999999999765  456679999986432 2234567999999999999999999999986    3 


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..+||||||++|+|.
T Consensus       408 ~~~~lv~E~~~~g~L~  423 (613)
T 2ozo_A          408 EALMLVMEMAGGGPLH  423 (613)
T ss_dssp             SSEEEEEECCTTCBHH
T ss_pred             CCeEEEEEeCCCCcHH
Confidence            5689999999999874

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.44  E-value=1.4e-13  Score=114.68  Aligned_cols=89  Identities=18%  Similarity=0.172  Sum_probs=75.3

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCc
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~  183 (199)
                      .++|++.+.||+|+||+||++.+..++..+|+|.+...... ....+.+..|..++..+ +|+||+++++++.    ..+
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~----~~~  415 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ----TMD  415 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB----CSS
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE----eCC
Confidence            45689999999999999999999999999999998653221 12345678899999988 6999999999887    778


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      .+||||||++||+|.
T Consensus       416 ~~~lV~E~~~gg~L~  430 (674)
T 3pfq_A          416 RLYFVMEYVNGGDLM  430 (674)
T ss_dssp             EEEEEEECCCSCBHH
T ss_pred             EEEEEEeCcCCCcHH
Confidence            999999999999984

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.44  E-value=3.1e-13  Score=101.57  Aligned_cols=87  Identities=23%  Similarity=0.349  Sum_probs=70.0

Q ss_pred             ccccceeecCccceeEEEEEECCCCc---EEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGV---AVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~---~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      .++..+.||+|+||.||+|.+..++.   .+|+|.+.. .......+.+.+|+.++++++||||+++++++.+   ....
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~   97 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR-ITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLP---PEGL   97 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETT-CCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC---SSSC
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccc-cccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEec---CCCC
Confidence            45667999999999999998655443   799998864 2344556789999999999999999999998862   3344


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+.+|+|.
T Consensus        98 ~~~v~e~~~~~~L~  111 (298)
T 3pls_A           98 PHVLLPYMCHGDLL  111 (298)
T ss_dssp             CEEEECCCTTCBHH
T ss_pred             cEEEEecccCCCHH
Confidence            58999999999874

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.44  E-value=2.9e-13  Score=104.10  Aligned_cols=89  Identities=21%  Similarity=0.302  Sum_probs=75.6

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCC--CCccceeeeeeeeecC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQH--PNIVSFYGYWEVTLTK  181 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~  181 (199)
                      ...+.|++.+.||+|+||.||++.+ .++..+|+|.+..........+.+.+|+.++.+++|  +||+++++++.    .
T Consensus         6 ~~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~----~   80 (343)
T 3dbq_A            6 VKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI----T   80 (343)
T ss_dssp             SSSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE----C
T ss_pred             eecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEe----e
Confidence            3456799999999999999999987 458889999987666666667889999999999976  99999999987    7


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..+|||| +.+|+|.
T Consensus        81 ~~~~~lv~e-~~~~~L~   96 (343)
T 3dbq_A           81 DQYIYMVME-CGNIDLN   96 (343)
T ss_dssp             SSEEEEEEC-CCSEEHH
T ss_pred             CCEEEEEEe-CCCCCHH
Confidence            889999999 5566653

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.44  E-value=1.7e-13  Score=104.75  Aligned_cols=87  Identities=29%  Similarity=0.420  Sum_probs=65.5

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcE----EEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVA----VAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~----~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      .+.|++.+.||+|+||.||+|.+..++..    +++|.+... ......+.+.+|+.++++++||||++++++|.    .
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~   88 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICL----T   88 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEE----S
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEe----c
Confidence            45789999999999999999998777655    467766432 22234567999999999999999999999986    3


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                       +..++||||+++|+|.
T Consensus        89 -~~~~~v~e~~~~g~L~  104 (327)
T 3poz_A           89 -STVQLITQLMPFGCLL  104 (327)
T ss_dssp             -SSEEEEEECCTTCBHH
T ss_pred             -CCeEEEEEecCCCcHH
Confidence             3478999999999874

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.44  E-value=3.7e-13  Score=102.63  Aligned_cols=88  Identities=23%  Similarity=0.353  Sum_probs=71.5

Q ss_pred             hhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHH-HHhcCCCCCccceeeeeeeeec
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAE-MLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      +....+.|++.+.||+|+||.||+|.+..++..||+|.+.... .......+..|+. +++.++||||+++++++.    
T Consensus        17 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~----   91 (327)
T 3aln_A           17 WDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF----   91 (327)
T ss_dssp             ECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC-CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE----
T ss_pred             cccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc-CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE----
Confidence            3445678899999999999999999999999999999986442 3444455666665 777789999999999987    


Q ss_pred             CCceEEEEEeccCC
Q psy360          181 KRKYIVLVTELMTS  194 (199)
Q Consensus       181 ~~~~~~lv~E~~~~  194 (199)
                      ..+..++||||+++
T Consensus        92 ~~~~~~lv~e~~~~  105 (327)
T 3aln_A           92 REGDCWICMELMST  105 (327)
T ss_dssp             CSSEEEEEECCCSE
T ss_pred             eCCceEEEEeecCC
Confidence            67889999999986

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.43  E-value=4.1e-13  Score=105.40  Aligned_cols=84  Identities=26%  Similarity=0.304  Sum_probs=67.5

Q ss_pred             ccccc-eeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHh-cCCCCCccceeeeeeeeecCCceE
Q psy360          108 YLKFE-EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLK-GLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       108 ~~~~~-~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .|.+. +.||+|+||+||++.+..++..||+|.+...       ..+.+|+.++. ..+||||+++++++.......+..
T Consensus        62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~  134 (400)
T 1nxk_A           62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL  134 (400)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence            34444 7899999999999999999999999998532       23667888774 458999999999886333346789


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |||||||+||+|.
T Consensus       135 ~lv~E~~~gg~L~  147 (400)
T 1nxk_A          135 LIVMECLDGGELF  147 (400)
T ss_dssp             EEEEECCCSEEHH
T ss_pred             EEEEEeCCCCcHH
Confidence            9999999999874

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.43  E-value=3.8e-13  Score=105.28  Aligned_cols=87  Identities=22%  Similarity=0.311  Sum_probs=74.1

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC--CCCccceeeeeeeeecCCc
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ--HPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~~  183 (199)
                      .+.|++.+.||+|+||.||++.+.. +..+|+|.+..........+.+.+|+.++.++.  |+||+++++++.    ..+
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~----~~~  129 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI----TDQ  129 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE----CSS
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEe----cCC
Confidence            3569999999999999999998765 889999999766556667788999999999996  599999999887    678


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..||||| +.+|+|.
T Consensus       130 ~~~lv~E-~~~~~L~  143 (390)
T 2zmd_A          130 YIYMVME-CGNIDLN  143 (390)
T ss_dssp             EEEEEEE-CCSEEHH
T ss_pred             EEEEEEe-cCCCCHH
Confidence            8999999 5666663

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.43  E-value=1.3e-13  Score=107.22  Aligned_cols=88  Identities=28%  Similarity=0.430  Sum_probs=70.6

Q ss_pred             cccccceeecCccceeEEEEEECCC---CcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQT---GVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..|++.+.||+|+||.||+|.+...   +..+|+|.+... ......+.+.+|+.++++++||||+++++++..   ..+
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~---~~~  164 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR---SEG  164 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECC---CSS
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEc---CCC
Confidence            3467889999999999999986533   356889988642 233456789999999999999999999998642   456


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus       165 ~~~lv~e~~~~g~L~  179 (373)
T 3c1x_A          165 SPLVVLPYMKHGDLR  179 (373)
T ss_dssp             CCEEEEECCTTCBHH
T ss_pred             CeEEEEECCCCCCHH
Confidence            789999999999884

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.43  E-value=7.7e-14  Score=106.49  Aligned_cols=87  Identities=23%  Similarity=0.336  Sum_probs=69.2

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcE----EEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVA----VAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~----~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      .+.|++.+.||+|+||.||+|.+..++..    +++|.+.... .....+.+.+|+.++++++||||+++++++.     
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----   85 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-----   85 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-----
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-----
Confidence            45789999999999999999998877765    6677664321 1112244778999999999999999999874     


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..++||||+++|+|.
T Consensus        86 ~~~~~~v~e~~~~~~L~  102 (325)
T 3kex_A           86 GSSLQLVTQYLPLGSLL  102 (325)
T ss_dssp             BSSEEEEEECCTTCBSH
T ss_pred             CCccEEEEEeCCCCCHH
Confidence            45689999999999984

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.43  E-value=1.4e-13  Score=106.69  Aligned_cols=88  Identities=22%  Similarity=0.260  Sum_probs=70.9

Q ss_pred             hhhcccccccceeecCccceeEEEEE-----ECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC---CCCccceee
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGL-----DTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ---HPNIVSFYG  173 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~-----~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~  173 (199)
                      .....+.|.+.+.||+|+||.||+|.     +..++..+|+|.+...  .   ...+..|+.++..++   |+||+++++
T Consensus        60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~---~~~~~~e~~~~~~l~~~~~~~iv~~~~  134 (365)
T 3e7e_A           60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--N---PWEFYIGTQLMERLKPSMQHMFMKFYS  134 (365)
T ss_dssp             EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--C---HHHHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred             EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--C---hhHHHHHHHHHHHhhhhhhhhhhhhhe
Confidence            34456789999999999999999994     5678889999998643  2   234777888888776   999999999


Q ss_pred             eeeeeecCCceEEEEEeccCCCCCC
Q psy360          174 YWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       174 ~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++.    ..+..|||||||++|+|.
T Consensus       135 ~~~----~~~~~~lv~e~~~~g~L~  155 (365)
T 3e7e_A          135 AHL----FQNGSVLVGELYSYGTLL  155 (365)
T ss_dssp             EEE----CSSCEEEEECCCCSCBHH
T ss_pred             eee----cCCCcEEEEeccCCCcHH
Confidence            887    778899999999999985

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.43  E-value=1.7e-13  Score=102.14  Aligned_cols=89  Identities=28%  Similarity=0.355  Sum_probs=71.5

Q ss_pred             hhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          101 ERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       101 ~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      .+....+.|++.+.||+|+||.||++.+.  +..+|+|.+....    ..+.+.+|+.++++++||||+++++++..   
T Consensus        15 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---   85 (278)
T 1byg_A           15 GWALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVE---   85 (278)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECC---
T ss_pred             cccCChhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEc---
Confidence            34455678999999999999999999864  6789999986432    34568999999999999999999998651   


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      ..+..++||||+++|+|.
T Consensus        86 ~~~~~~lv~e~~~~~~L~  103 (278)
T 1byg_A           86 EKGGLYIVTEYMAKGSLV  103 (278)
T ss_dssp             C--CCEEEECCCTTEEHH
T ss_pred             CCCceEEEEecCCCCCHH
Confidence            345789999999999874

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.43  E-value=5.7e-13  Score=110.67  Aligned_cols=92  Identities=27%  Similarity=0.426  Sum_probs=75.1

Q ss_pred             hhhhcccccccceeecCccceeEEEEEECC---CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeee
Q psy360          101 ERESMRGYLKFEEEIGRGSFKTVYRGLDTQ---TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEV  177 (199)
Q Consensus       101 ~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  177 (199)
                      ..+...+.|++.+.||+|+||.||+|.+..   .+..+|+|.+... ......+.+.+|+.++++++||||+++++++. 
T Consensus       384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-  461 (656)
T 2j0j_A          384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-  461 (656)
T ss_dssp             GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-
T ss_pred             ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-
Confidence            344556789999999999999999998754   3467899887532 34455678999999999999999999999874 


Q ss_pred             eecCCceEEEEEeccCCCCCC
Q psy360          178 TLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~~~~~~~~lv~E~~~~G~L~  198 (199)
                          .+..|+||||+++|+|.
T Consensus       462 ----~~~~~lv~E~~~~g~L~  478 (656)
T 2j0j_A          462 ----ENPVWIIMELCTLGELR  478 (656)
T ss_dssp             ----SSSCEEEEECCTTCBHH
T ss_pred             ----cCceEEEEEcCCCCcHH
Confidence                45679999999999874

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.42  E-value=3e-13  Score=105.48  Aligned_cols=67  Identities=22%  Similarity=0.357  Sum_probs=55.6

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWE  176 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  176 (199)
                      ...+.|++.+.||+|+||.||+|.+..++..||+|.+.....      ...+|+.+++.++||||+++++++.
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~   70 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFY   70 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheee
Confidence            455789999999999999999999999999999998864321      1347999999999999999999885

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.42  E-value=2.6e-13  Score=102.74  Aligned_cols=81  Identities=32%  Similarity=0.463  Sum_probs=68.2

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.|++.+.||+|+||.||++.+.  +..+|+|.+...    ...+.+.+|+.++++++||||+++++++.      +..
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~------~~~   74 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACL------NPV   74 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCT------TTT
T ss_pred             HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEc------CCc
Confidence            457889999999999999999875  568999988532    24567899999999999999999999774      236


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+++|+|.
T Consensus        75 ~lv~e~~~~~~L~   87 (307)
T 2eva_A           75 CLVMEYAEGGSLY   87 (307)
T ss_dssp             EEEEECCTTCBHH
T ss_pred             EEEEEcCCCCCHH
Confidence            8999999999874

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.42  E-value=8.8e-14  Score=106.14  Aligned_cols=83  Identities=27%  Similarity=0.380  Sum_probs=68.4

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.+.||+|+||.||+|.+..++..+|+|.+.... .......+.+|+.++++++||||+++++++.    ..+..+
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~   76 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH-EEGAPCTAIREVSLLKDLKHANIVTLHDIIH----TEKSLT   76 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEE----CSSCEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccc-ccccchhHHHHHHHHHhcCCCCCCeeeeEEe----eCCEEE
Confidence            46889999999999999999999999999999986432 1112224567999999999999999999987    778899


Q ss_pred             EEEeccCC
Q psy360          187 LVTELMTS  194 (199)
Q Consensus       187 lv~E~~~~  194 (199)
                      +||||+++
T Consensus        77 lv~e~~~~   84 (324)
T 3mtl_A           77 LVFEYLDK   84 (324)
T ss_dssp             EEEECCSE
T ss_pred             EEeccccc
Confidence            99999984

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.42  E-value=3.2e-13  Score=103.94  Aligned_cols=86  Identities=26%  Similarity=0.369  Sum_probs=66.6

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH---HHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA---ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+........   ..+.+.+|+.++++++||||+++++++.    .
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~   83 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFG----H   83 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEEC----C
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEe----e
Confidence            34678999999999999999999999999999999864322211   1246889999999999999999999987    6


Q ss_pred             CceEEEEEeccCC
Q psy360          182 RKYIVLVTELMTS  194 (199)
Q Consensus       182 ~~~~~lv~E~~~~  194 (199)
                      .+..++||||+++
T Consensus        84 ~~~~~lv~e~~~~   96 (346)
T 1ua2_A           84 KSNISLVFDFMET   96 (346)
T ss_dssp             TTCCEEEEECCSE
T ss_pred             CCceEEEEEcCCC
Confidence            7889999999986

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.41  E-value=1.1e-12  Score=98.79  Aligned_cols=85  Identities=26%  Similarity=0.325  Sum_probs=68.6

Q ss_pred             cccccc-eeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHH-hcCCCCCccceeeeeeeeecCCce
Q psy360          107 GYLKFE-EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEML-KGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       107 ~~~~~~-~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      +.|.+. +.||+|+||.||++.+..++..+|+|.+...       ..+.+|+.++ +.++||||+++++++.........
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   89 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC   89 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence            344554 7899999999999999999999999998532       2466788887 566899999999988633334678


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+++|+|.
T Consensus        90 ~~lv~e~~~~~~L~  103 (299)
T 3m2w_A           90 LLIVMECLDGGELF  103 (299)
T ss_dssp             EEEEECCCCSCBHH
T ss_pred             EEEEEeecCCCcHH
Confidence            99999999999874

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.41  E-value=4.8e-14  Score=109.80  Aligned_cols=89  Identities=12%  Similarity=0.109  Sum_probs=68.1

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHH---HHHhcCCCCCcccee-------e
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEA---EMLKGLQHPNIVSFY-------G  173 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~  173 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..||+|.+..... .....+.+.+|+   .++++++||||++++       +
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred             CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence            45679999999999999999999988999999999864322 233557789999   556666899999998       4


Q ss_pred             eeeeeecCCc-----------------eEEEEEeccCCCCCC
Q psy360          174 YWEVTLTKRK-----------------YIVLVTELMTSGTLK  198 (199)
Q Consensus       174 ~~~~~~~~~~-----------------~~~lv~E~~~~G~L~  198 (199)
                      ++.    ..+                 ..||||||+ +|+|.
T Consensus       151 ~~~----~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~  187 (377)
T 3byv_A          151 LVK----DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQ  187 (377)
T ss_dssp             EEE----CTTSCSEEEC------CEEESEEEEEECC-SEEHH
T ss_pred             hhh----ccCCccccccccCCCceEEEEEEEEEecc-CCCHH
Confidence            443    221                 379999999 57774

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.41  E-value=7.3e-13  Score=101.95  Aligned_cols=91  Identities=20%  Similarity=0.315  Sum_probs=74.1

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee-ecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT-LTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~~  183 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+... ........+.+|+.++++++||||+++++++... .....
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   87 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN   87 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred             cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence            456799999999999999999999999999999998532 2444566788999999999999999999987521 11236


Q ss_pred             eEEEEEeccCCCCC
Q psy360          184 YIVLVTELMTSGTL  197 (199)
Q Consensus       184 ~~~lv~E~~~~G~L  197 (199)
                      ..++||||+.+ +|
T Consensus        88 ~~~lv~e~~~~-~L  100 (353)
T 2b9h_A           88 EVYIIQELMQT-DL  100 (353)
T ss_dssp             CEEEEECCCSE-EH
T ss_pred             eEEEEEeccCc-cH
Confidence            78999999974 54

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.41  E-value=8.4e-13  Score=100.09  Aligned_cols=84  Identities=20%  Similarity=0.270  Sum_probs=63.7

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+..........+.+..+..+++.++||||+++++++.    ..+.
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~----~~~~   98 (318)
T 2dyl_A           23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFI----TNTD   98 (318)
T ss_dssp             CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE----CSSE
T ss_pred             hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEe----cCCc
Confidence            346788999999999999999999999999999998754433333444555666788889999999999987    7788


Q ss_pred             EEEEEecc
Q psy360          185 IVLVTELM  192 (199)
Q Consensus       185 ~~lv~E~~  192 (199)
                      .++||||+
T Consensus        99 ~~lv~e~~  106 (318)
T 2dyl_A           99 VFIAMELM  106 (318)
T ss_dssp             EEEEECCC
T ss_pred             EEEEEecc
Confidence            99999999

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.39  E-value=8.8e-13  Score=100.66  Aligned_cols=93  Identities=28%  Similarity=0.358  Sum_probs=74.9

Q ss_pred             hhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeeeeeee--
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVT--  178 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--  178 (199)
                      .+....+|++.+.||+|+||.||++.+..++..+|+|.+...  .....+.+.+|+.++.++. ||||+++++++...  
T Consensus        23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~  100 (337)
T 3ll6_A           23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE  100 (337)
T ss_dssp             EEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTT
T ss_pred             eeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhcccccccccc
Confidence            344456799999999999999999999999999999988533  4455677899999999996 99999999987311  


Q ss_pred             --ecCCceEEEEEeccCCCCC
Q psy360          179 --LTKRKYIVLVTELMTSGTL  197 (199)
Q Consensus       179 --~~~~~~~~lv~E~~~~G~L  197 (199)
                        .......++||||+. |+|
T Consensus       101 ~~~~~~~~~~lv~e~~~-g~L  120 (337)
T 3ll6_A          101 ESDTGQAEFLLLTELCK-GQL  120 (337)
T ss_dssp             TSTTSSEEEEEEEECCS-EEH
T ss_pred             ccccCCceEEEEEEecC-CCH
Confidence              124567899999997 454

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.39  E-value=1.1e-12  Score=101.46  Aligned_cols=94  Identities=26%  Similarity=0.349  Sum_probs=74.3

Q ss_pred             hhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc---------CHHHHHHHHHHHHHHhcCCCCCccc
Q psy360          100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL---------NKAERARFREEAEMLKGLQHPNIVS  170 (199)
Q Consensus       100 ~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~---------~~~~~~~~~~E~~~l~~l~h~niv~  170 (199)
                      .+.....+.|++.+.||+|+||.||+|.+.. +..+|+|.+.....         .....+.+.+|+.++++++||||++
T Consensus        15 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   93 (362)
T 3pg1_A           15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG   93 (362)
T ss_dssp             HHHHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence            3445667889999999999999999998755 88999998854321         2234577999999999999999999


Q ss_pred             eeeeeeeee-cCCceEEEEEeccCC
Q psy360          171 FYGYWEVTL-TKRKYIVLVTELMTS  194 (199)
Q Consensus       171 l~~~~~~~~-~~~~~~~lv~E~~~~  194 (199)
                      +++++.... ......|+||||+++
T Consensus        94 ~~~~~~~~~~~~~~~~~lv~e~~~~  118 (362)
T 3pg1_A           94 LRDIFVHFEEPAMHKLYLVTELMRT  118 (362)
T ss_dssp             CSEEEEECCTTTCCEEEEEEECCSE
T ss_pred             eeeeEEeccCCCcceEEEEEccCCC
Confidence            999875221 134578999999984

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.39  E-value=1e-13  Score=107.17  Aligned_cols=90  Identities=18%  Similarity=0.279  Sum_probs=73.1

Q ss_pred             cccccccceeecCccceeEEEEEEC---CCCcEEEEEEeccccc--CHHHHHHHHHHHHHHhcC-CCCCccceeeeeeee
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDT---QTGVAVAWCELQEKKL--NKAERARFREEAEMLKGL-QHPNIVSFYGYWEVT  178 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~---~~~~~~a~k~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  178 (199)
                      ..++|++.+.||+|+||.||++.+.   .++..+|+|.+.....  .....+.+.+|+.++.++ +|+||+++++++.  
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~--  129 (355)
T 1vzo_A           52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ--  129 (355)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE--
T ss_pred             cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEe--
Confidence            3467999999999999999999874   5789999999864321  111224467799999999 6999999999887  


Q ss_pred             ecCCceEEEEEeccCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~  198 (199)
                        ..+..+|||||+++|+|.
T Consensus       130 --~~~~~~lv~e~~~~~~L~  147 (355)
T 1vzo_A          130 --TETKLHLILDYINGGELF  147 (355)
T ss_dssp             --ETTEEEEEECCCCSCBHH
T ss_pred             --eCceEEEEeecCCCCCHH
Confidence              678899999999999874

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.39  E-value=1.8e-13  Score=107.25  Aligned_cols=57  Identities=16%  Similarity=0.216  Sum_probs=45.8

Q ss_pred             eeeccCCCcccccccccc--cCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            9 NIRTQRTPEFMAPEMYEE--HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~~--~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ..+.+||+.|||||++.+  .++.++|+||+||++|||++|+.||... +....+..+..
T Consensus       219 ~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~-~~~~~l~~I~~  277 (398)
T 4b99_A          219 MTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK-NYVHQLQLIMM  277 (398)
T ss_dssp             CCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS-SHHHHHHHHHH
T ss_pred             cccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC-CHHHHHHHHHH
Confidence            456799999999997753  4799999999999999999999999764 44444455544

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.39  E-value=8.8e-14  Score=114.93  Aligned_cols=92  Identities=29%  Similarity=0.422  Sum_probs=74.5

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee--ecCCc
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT--LTKRK  183 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~~  183 (199)
                      .+.|++.+.||+|+||.||+|.+..++..||+|.+... ......+.+.+|+.++++++||||+++++++...  ....+
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~   91 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND   91 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence            36789999999999999999999999999999988643 3555677899999999999999999999986510  11266


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++|||||+||+|.
T Consensus        92 ~~~LVmEy~~ggsL~  106 (676)
T 3qa8_A           92 LPLLAMEYCEGGDLR  106 (676)
T ss_dssp             SCCCEEECCSSCBHH
T ss_pred             eEEEEEEeCCCCCHH
Confidence            789999999999874

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.39  E-value=1.7e-12  Score=100.54  Aligned_cols=91  Identities=21%  Similarity=0.246  Sum_probs=74.3

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee-cCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL-TKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~  183 (199)
                      ..+.|++.+.||+|+||.||++.+..++..||+|.+... ......+.+.+|+.++.+++||||+++++++.... ....
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  103 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK  103 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc-cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence            346799999999999999999999999999999998642 24445677999999999999999999999886211 1225


Q ss_pred             eEEEEEeccCCCCC
Q psy360          184 YIVLVTELMTSGTL  197 (199)
Q Consensus       184 ~~~lv~E~~~~G~L  197 (199)
                      ..|+||||+.+ +|
T Consensus       104 ~~~iv~e~~~~-~L  116 (364)
T 3qyz_A          104 DVYIVQDLMET-DL  116 (364)
T ss_dssp             CEEEEEECCSE-EH
T ss_pred             eEEEEEcccCc-CH
Confidence            78999999984 54

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.37  E-value=9.6e-13  Score=100.82  Aligned_cols=88  Identities=27%  Similarity=0.385  Sum_probs=70.1

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhc--CCCCCccceeeeeeeeecC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKG--LQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~  181 (199)
                      ...+.|++.+.||+|+||.||+|.+  ++..+|+|.+...     ....+.+|+.++..  ++||||+++++++......
T Consensus        39 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~  111 (342)
T 1b6c_B           39 TIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGT  111 (342)
T ss_dssp             HHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSS
T ss_pred             cccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCc
Confidence            4557899999999999999999987  4789999998543     23457788888877  7899999999988721111


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      ....++||||+++|+|.
T Consensus       112 ~~~~~lv~e~~~~g~L~  128 (342)
T 1b6c_B          112 WTQLWLVSDYHEHGSLF  128 (342)
T ss_dssp             CCCEEEEECCCTTCBHH
T ss_pred             cceeEEEEeecCCCcHH
Confidence            13789999999999984

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.37  E-value=8e-13  Score=99.31  Aligned_cols=86  Identities=23%  Similarity=0.273  Sum_probs=73.7

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  182 (199)
                      ...++|++.+.||+|+||.||+|.+..++..+|+|.+.....    .+.+.+|+.++..+ +|+|++++++++.    ..
T Consensus         7 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~----~~   78 (298)
T 1csn_A            7 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQ----EG   78 (298)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEE----ET
T ss_pred             ccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----cHHHHHHHHHHHHHhcCCCCCeEEeecC----CC
Confidence            345679999999999999999999999999999998864322    23478899999999 7999999999887    67


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      ...++||||+ +|+|.
T Consensus        79 ~~~~lv~e~~-~~~L~   93 (298)
T 1csn_A           79 LHNVLVIDLL-GPSLE   93 (298)
T ss_dssp             TEEEEEEECC-CCBHH
T ss_pred             ceeEEEEEec-CCCHH
Confidence            8899999999 88874

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.36  E-value=6.2e-14  Score=106.47  Aligned_cols=94  Identities=26%  Similarity=0.302  Sum_probs=75.9

Q ss_pred             hhhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeee
Q psy360           98 KEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEV  177 (199)
Q Consensus        98 ~~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  177 (199)
                      ....++...+.|++.+.||+|+||.||+|.+..   .+++|.+..........+.+.+|+.++++++|+||+++++++. 
T Consensus        24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-   99 (319)
T 2y4i_B           24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM-   99 (319)
T ss_dssp             CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEE-
T ss_pred             ccccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEe-
Confidence            345566677889999999999999999998754   3888887644332223345778999999999999999999987 


Q ss_pred             eecCCceEEEEEeccCCCCCC
Q psy360          178 TLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~~~~~~~~lv~E~~~~G~L~  198 (199)
                         ..+..++||||+++|+|.
T Consensus       100 ---~~~~~~iv~e~~~~~~L~  117 (319)
T 2y4i_B          100 ---SPPHLAIITSLCKGRTLY  117 (319)
T ss_dssp             ---CSSCEEEECBCCCSEEHH
T ss_pred             ---cCCceEEEeecccCCcHH
Confidence               677899999999998874

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.36  E-value=1.1e-12  Score=103.05  Aligned_cols=85  Identities=16%  Similarity=0.364  Sum_probs=63.0

Q ss_pred             hccccccc-ceeecCccceeEEEEEEC--CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          104 SMRGYLKF-EEEIGRGSFKTVYRGLDT--QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       104 ~~~~~~~~-~~~lG~G~fg~v~~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      ...+.|.+ ++.||+|+||.||+|.+.  .++..+|+|.+......    ..+.+|+.++++++||||+++++++..  .
T Consensus        17 ~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~--~   90 (405)
T 3rgf_A           17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLS--H   90 (405)
T ss_dssp             CHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC----HHHHHHHHHHHHCCCTTBCCCCEEEEE--T
T ss_pred             hhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC----HHHHHHHHHHHhcCCCCeeeEeeEEec--C
Confidence            33445665 568999999999999965  56889999998754433    347899999999999999999998852  1


Q ss_pred             CCceEEEEEeccCC
Q psy360          181 KRKYIVLVTELMTS  194 (199)
Q Consensus       181 ~~~~~~lv~E~~~~  194 (199)
                      .....+|||||+.+
T Consensus        91 ~~~~~~lv~e~~~~  104 (405)
T 3rgf_A           91 ADRKVWLLFDYAEH  104 (405)
T ss_dssp             TTTEEEEEEECCSE
T ss_pred             CCCeEEEEEeCCCC
Confidence            46789999999985

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.36  E-value=1.4e-12  Score=97.73  Aligned_cols=89  Identities=31%  Similarity=0.416  Sum_probs=63.8

Q ss_pred             cccccccceeecCccceeEEEEEECC-CC--cEEEEEEecccccC-HHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQ-TG--VAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~-~~--~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      ..+.|++.+.||+|+||.||+|.+.. ++  ..+|+|.+...... ....+.+.+|+.++.+++||||+++++++.    
T Consensus        16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----   91 (291)
T 1u46_A           16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL----   91 (291)
T ss_dssp             CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEEC----
T ss_pred             chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEc----
Confidence            34678999999999999999998643 33  36899988644322 234577999999999999999999999886    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      . +..++||||+++|+|.
T Consensus        92 ~-~~~~~v~e~~~~~~L~  108 (291)
T 1u46_A           92 T-PPMKMVTELAPLGSLL  108 (291)
T ss_dssp             S-SSCEEEEECCTTCBHH
T ss_pred             c-CCceeeEecccCCCHH
Confidence            3 3478999999999874

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.36  E-value=9e-13  Score=100.70  Aligned_cols=87  Identities=29%  Similarity=0.425  Sum_probs=69.7

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEE----EEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAV----AWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~----a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      .+.|++.+.||+|+||.||+|.+..++..+    ++|.+.... .....+.+.+|+.++++++||||+++++++.    .
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----~   88 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICL----T   88 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEE----S
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEe----c
Confidence            467899999999999999999988777654    666654321 2223467899999999999999999999986    3


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                       +..++||||+.+|+|.
T Consensus        89 -~~~~~v~~~~~~g~L~  104 (327)
T 3lzb_A           89 -STVQLITQLMPFGCLL  104 (327)
T ss_dssp             -SSEEEEECCCSSCBHH
T ss_pred             -CCceEEEEecCCCcHH
Confidence             3478999999999874

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.36  E-value=3.1e-12  Score=97.74  Aligned_cols=89  Identities=21%  Similarity=0.318  Sum_probs=67.7

Q ss_pred             hhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC--CCCCccceeeeeeeeec
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL--QHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~~  180 (199)
                      ....+.|++.+.||+|+||.||+|.+.  +..+|+|.+....     ...+..|..++..+  +||||+++++++.....
T Consensus        33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~  105 (337)
T 3mdy_A           33 RTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE-----EASWFRETEIYQTVLMRHENILGFIAADIKGTG  105 (337)
T ss_dssp             TTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred             cccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc-----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence            345578999999999999999999875  7789999985432     22344555555544  89999999998873222


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      .....++||||+++|+|.
T Consensus       106 ~~~~~~lv~e~~~~g~L~  123 (337)
T 3mdy_A          106 SWTQLYLITDYHENGSLY  123 (337)
T ss_dssp             GGCEEEEEECCCTTCBHH
T ss_pred             CCCceEEEEeccCCCcHH
Confidence            227899999999999984

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.35  E-value=1.6e-12  Score=98.53  Aligned_cols=93  Identities=20%  Similarity=0.279  Sum_probs=77.2

Q ss_pred             hhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC--CCCccceeeeeee
Q psy360          100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ--HPNIVSFYGYWEV  177 (199)
Q Consensus       100 ~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~  177 (199)
                      .......+.|++.+.||+|+||.||++.+. ++..+|+|.+..........+.+.+|+.++.++.  |+||+++++++. 
T Consensus        21 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~-   98 (313)
T 3cek_A           21 QSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-   98 (313)
T ss_dssp             CEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE-
T ss_pred             eeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEee-
Confidence            334455678999999999999999999875 4888999998766556667788999999999997  599999999987 


Q ss_pred             eecCCceEEEEEeccCCCCCC
Q psy360          178 TLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~~~~~~~~lv~E~~~~G~L~  198 (199)
                         ..+..++||| +.+|+|.
T Consensus        99 ---~~~~~~lv~e-~~~~~L~  115 (313)
T 3cek_A           99 ---TDQYIYMVME-CGNIDLN  115 (313)
T ss_dssp             ---CSSEEEEEEC-CCSEEHH
T ss_pred             ---cCCEEEEEEe-cCCCcHH
Confidence               7788999999 5566653

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.35  E-value=3.8e-13  Score=110.02  Aligned_cols=61  Identities=21%  Similarity=0.233  Sum_probs=49.0

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhcc
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI   69 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~   69 (199)
                      .....+||+.|||||++. ..|+.++|+||+||++|+|++|+.||.. .+..+.+..+.....
T Consensus       312 ~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~-~~~~~~~~~i~~~~~  373 (573)
T 3uto_A          312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG-ENDDETLRNVKSCDW  373 (573)
T ss_dssp             EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC-SSHHHHHHHHHTTCC
T ss_pred             ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-cCHHHHHHHHHhCCC
Confidence            345679999999999887 5699999999999999999999999976 344555555555433

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.35  E-value=2.3e-13  Score=103.10  Aligned_cols=93  Identities=20%  Similarity=0.374  Sum_probs=66.9

Q ss_pred             hhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH----HHHHHHHHHHHHHhcC----CCCCccceee
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK----AERARFREEAEMLKGL----QHPNIVSFYG  173 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~----~~~~~~~~E~~~l~~l----~h~niv~l~~  173 (199)
                      .+...+.|++.+.||+|+||.||+|.+..++..+|+|.+.......    .....+.+|+.++.++    +|+||+++++
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            3455678999999999999999999999999999999986543322    1233466789988888    8999999999


Q ss_pred             eeeeeecCCceEEEEEec-cCCCCCC
Q psy360          174 YWEVTLTKRKYIVLVTEL-MTSGTLK  198 (199)
Q Consensus       174 ~~~~~~~~~~~~~lv~E~-~~~G~L~  198 (199)
                      ++.    ..+..++|||| +.+|+|.
T Consensus       106 ~~~----~~~~~~~v~e~~~~~~~L~  127 (312)
T 2iwi_A          106 WFE----TQEGFMLVLERPLPAQDLF  127 (312)
T ss_dssp             EC---------CEEEEECCSSEEEHH
T ss_pred             EEe----cCCeEEEEEEecCCCCCHH
Confidence            887    66788999999 7888764

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.34  E-value=2.4e-12  Score=100.46  Aligned_cols=88  Identities=19%  Similarity=0.272  Sum_probs=72.6

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC--------CCCccceeeeee
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ--------HPNIVSFYGYWE  176 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~  176 (199)
                      ..++|++.+.||+|+||.||+|.+..++..||+|.+..   .....+.+.+|+.+++.++        |+||+++++++.
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~  111 (397)
T 1wak_A           35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS---AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK  111 (397)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred             cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec---CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence            45679999999999999999999999999999999864   2445567889999999885        788999999886


Q ss_pred             eeecCCceEEEEEeccCCC
Q psy360          177 VTLTKRKYIVLVTELMTSG  195 (199)
Q Consensus       177 ~~~~~~~~~~lv~E~~~~G  195 (199)
                      .........+|||||+.++
T Consensus       112 ~~~~~~~~~~lv~e~~~~~  130 (397)
T 1wak_A          112 ISGVNGTHICMVFEVLGHH  130 (397)
T ss_dssp             EEETTEEEEEEEECCCCCB
T ss_pred             ecCCCCceEEEEEeccCcc
Confidence            3333456899999999543

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.34  E-value=1e-12  Score=101.76  Aligned_cols=94  Identities=12%  Similarity=0.107  Sum_probs=69.4

Q ss_pred             hcccccccceeecCccceeEEEEEECCC-----CcEEEEEEecccccCHH-H--------HHHHHHHHHHHhcCCCCCcc
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQT-----GVAVAWCELQEKKLNKA-E--------RARFREEAEMLKGLQHPNIV  169 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~-----~~~~a~k~~~~~~~~~~-~--------~~~~~~E~~~l~~l~h~niv  169 (199)
                      ...+.|++.+.||+|+||.||+|.+..+     +..+|+|.+........ +        ...+..|+..+..++|+||+
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv  111 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP  111 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence            3456899999999999999999988664     57899999864321100 0        12355677788899999999


Q ss_pred             ceeeeeeeeecCCceEEEEEeccCCCCCC
Q psy360          170 SFYGYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       170 ~l~~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++++++..........+|||||+ ||+|.
T Consensus       112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~  139 (364)
T 3op5_A          112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQ  139 (364)
T ss_dssp             CEEEEEEEEETTEEEEEEEEECE-EEEHH
T ss_pred             eEEeeeeeccCCcceEEEEEeCC-CCCHH
Confidence            99998874333346789999999 88874

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.34  E-value=4.4e-12  Score=97.25  Aligned_cols=88  Identities=18%  Similarity=0.252  Sum_probs=66.7

Q ss_pred             cccccccc-eeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFE-EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~-~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..+.|++. +.||+|+||.||+|.+..++..||+|.+...   ...   ..+....+..+.|+||+++++++........
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~---~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~   99 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---PKA---RQEVDHHWQASGGPHIVCILDVYENMHHGKR   99 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---HHH---HHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---HHH---HHHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence            44567775 4699999999999999999999999998542   221   1222234566799999999998874333456


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..++||||+++|+|.
T Consensus       100 ~~~lv~e~~~gg~L~  114 (336)
T 3fhr_A          100 CLLIIMECMEGGELF  114 (336)
T ss_dssp             EEEEEEECCTTEEHH
T ss_pred             eEEEEEeccCCCCHH
Confidence            789999999999874

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.34  E-value=9.7e-14  Score=105.07  Aligned_cols=42  Identities=24%  Similarity=0.374  Sum_probs=34.3

Q ss_pred             eccCCCcccccccccc-------cCCCcCcchhHHHHHHHHHhCCCCCC
Q psy360           11 RTQRTPEFMAPEMYEE-------HYDESVDVYAFGMCMLEMSTSEYPYM   52 (199)
Q Consensus        11 ~~~gt~~y~ape~~~~-------~~~~~~d~ws~gv~l~~l~~g~~p~~   52 (199)
                      +.+||+.|||||++.+       .++.++|||||||+||||+||+.|+.
T Consensus       171 ~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~  219 (303)
T 3hmm_A          171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG  219 (303)
T ss_dssp             ---CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTT
T ss_pred             cccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCC
Confidence            5689999999998853       36789999999999999999987664

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.34  E-value=1e-12  Score=99.35  Aligned_cols=92  Identities=25%  Similarity=0.329  Sum_probs=66.6

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH---HHHHHHHHHHHHHhcC---CCCCccceeeeeeee
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK---AERARFREEAEMLKGL---QHPNIVSFYGYWEVT  178 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~  178 (199)
                      ..++|++.+.||+|+||.||+|.+..++..||+|.+.......   .....+.+|+.+++.+   +||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            4568999999999999999999999999999999986432211   1123456677776666   499999999988632


Q ss_pred             ec-CCceEEEEEeccCCCCC
Q psy360          179 LT-KRKYIVLVTELMTSGTL  197 (199)
Q Consensus       179 ~~-~~~~~~lv~E~~~~G~L  197 (199)
                      .. .....++||||+.+ +|
T Consensus        87 ~~~~~~~~~lv~e~~~~-~L  105 (308)
T 3g33_A           87 RTDREIKVTLVFEHVDQ-DL  105 (308)
T ss_dssp             CSSSEEEEEEEEECCCC-BH
T ss_pred             CCCCceeEEEEehhhhc-CH
Confidence            11 11258999999984 65

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.33  E-value=1.2e-12  Score=100.72  Aligned_cols=93  Identities=18%  Similarity=0.151  Sum_probs=66.7

Q ss_pred             cccccccceeecCccceeEEEEEECC---CCcEEEEEEecccccCHH---------HHHHHHHHHHHHhcCCCCCcccee
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQ---TGVAVAWCELQEKKLNKA---------ERARFREEAEMLKGLQHPNIVSFY  172 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~---~~~~~a~k~~~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~  172 (199)
                      ..+.|++.+.||+|+||.||+|.+..   ++..+|+|..........         ....+.+|+..+..++||||++++
T Consensus        35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~  114 (345)
T 2v62_A           35 EGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFY  114 (345)
T ss_dssp             TSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEE
T ss_pred             cCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceee
Confidence            34679999999999999999999876   778899998864321110         113467889999999999999999


Q ss_pred             eeeeeeecCCceEEEEEeccCCCCCC
Q psy360          173 GYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       173 ~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      +++..........|+||||+ +|+|.
T Consensus       115 ~~~~~~~~~~~~~~lv~e~~-~~~L~  139 (345)
T 2v62_A          115 GSGLTEFKGRSYRFMVMERL-GIDLQ  139 (345)
T ss_dssp             EEEEEESSSCEEEEEEEECE-EEEHH
T ss_pred             cccccccCCCcEEEEEEecc-CCCHH
Confidence            98873222367899999999 88874

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.33  E-value=1.8e-12  Score=100.08  Aligned_cols=89  Identities=27%  Similarity=0.349  Sum_probs=59.9

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec---
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT---  180 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---  180 (199)
                      ...+.|++.+.||+|+||.||+|.+..++..+|+|.+.....   ......+++..+..++||||+++++++.....   
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~   96 (360)
T 3e3p_A           20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR---FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDR   96 (360)
T ss_dssp             HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT---CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCT
T ss_pred             hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc---ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccc
Confidence            445679999999999999999999999999999998854321   12346677888888999999999998863211   


Q ss_pred             CCceEEEEEeccCCC
Q psy360          181 KRKYIVLVTELMTSG  195 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G  195 (199)
                      .....++||||++++
T Consensus        97 ~~~~~~lv~e~~~~~  111 (360)
T 3e3p_A           97 RDIYLNVVMEYVPDT  111 (360)
T ss_dssp             TCEEEEEEEECCSCB
T ss_pred             cceeEEEEeeccccc
Confidence            223489999999975

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.33  E-value=6.4e-13  Score=109.48  Aligned_cols=46  Identities=24%  Similarity=0.490  Sum_probs=40.8

Q ss_pred             eeeccCCCccccccccc-c-cCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE-E-HYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~-~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      +.+.|||+.|||||++. + .|+.++|+||+||++|||++|+.||...
T Consensus       347 ~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~  394 (689)
T 3v5w_A          347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH  394 (689)
T ss_dssp             CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGG
T ss_pred             CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            44679999999999885 4 5999999999999999999999999753

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.32  E-value=3.9e-12  Score=100.42  Aligned_cols=84  Identities=24%  Similarity=0.292  Sum_probs=67.5

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec--CCc
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT--KRK  183 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~~  183 (199)
                      ...|++.+.||+|+||.||+|.+..++..||+|.+.....      ...+|+.+++.++|+||++++++|.....  ...
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~  126 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV  126 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred             cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence            3468999999999999999999999999999999864321      23479999999999999999998753221  233


Q ss_pred             eEEEEEeccCCC
Q psy360          184 YIVLVTELMTSG  195 (199)
Q Consensus       184 ~~~lv~E~~~~G  195 (199)
                      +.++||||++++
T Consensus       127 ~~~lv~e~~~~~  138 (420)
T 1j1b_A          127 YLNLVLDYVPET  138 (420)
T ss_dssp             EEEEEEECCCEE
T ss_pred             eEEeehhccccc
Confidence            578999999863

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.32  E-value=3.1e-13  Score=102.03  Aligned_cols=42  Identities=24%  Similarity=0.574  Sum_probs=33.4

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      .+..+||+.|||||++. ..++.++|+|||||++|||++   ||..
T Consensus       187 ~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~  229 (299)
T 4g31_A          187 HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST  229 (299)
T ss_dssp             -----CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred             cCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC
Confidence            34578999999999887 569999999999999999995   7753

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.29  E-value=3.4e-12  Score=97.14  Aligned_cols=92  Identities=23%  Similarity=0.344  Sum_probs=68.7

Q ss_pred             cccccccceeecCccceeEEEEEEC-CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC---CCCCccceeeeeeeee-
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDT-QTGVAVAWCELQEKKLNKAERARFREEAEMLKGL---QHPNIVSFYGYWEVTL-  179 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~-~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~-  179 (199)
                      ..+.|++.+.||+|+||.||++.+. .++..+|+|.+............+.+|+.+++.+   .||||+++++++.... 
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            4467999999999999999999985 6788999999865433222223456677766655   8999999999875221 


Q ss_pred             cCCceEEEEEeccCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTL  197 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L  197 (199)
                      ......++||||+. |+|
T Consensus        89 ~~~~~~~lv~e~~~-~~L  105 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDL  105 (326)
T ss_dssp             SSEEEEEEEEECCS-CBH
T ss_pred             CCCceEEEEEecCC-CCH
Confidence            13567899999998 465

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.29  E-value=5.3e-12  Score=96.48  Aligned_cols=88  Identities=30%  Similarity=0.283  Sum_probs=65.2

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHH--HHHHhcCCCCCccceeeeeeeee-c
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREE--AEMLKGLQHPNIVSFYGYWEVTL-T  180 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E--~~~l~~l~h~niv~l~~~~~~~~-~  180 (199)
                      ...+.|++.+.||+|+||.||+|.+  ++..||+|.+....     .+.+..|  +..+..++|+||+++++.+.... .
T Consensus        10 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~   82 (336)
T 3g2f_A           10 LDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTAD   82 (336)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTT
T ss_pred             cChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheecccccccC
Confidence            3456899999999999999999976  57899999986432     1223334  44455689999999998654221 2


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      .....++||||+++|+|.
T Consensus        83 ~~~~~~lv~e~~~~g~L~  100 (336)
T 3g2f_A           83 GRMEYLLVMEYYPNGSLX  100 (336)
T ss_dssp             SCEEEEEEECCCTTCBHH
T ss_pred             CCceEEEEEecCCCCcHH
Confidence            345679999999999984

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.29  E-value=4.5e-12  Score=95.11  Aligned_cols=86  Identities=24%  Similarity=0.330  Sum_probs=71.0

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..++|++.+.||+|+||.||+|.+..++..+|+|.+......    +.+.+|+.++..++|+|++..+.++..   ..+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~---~~~~   79 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGA---EGDY   79 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC----CHHHHHHHHHHHHTTSTTCCCEEEEEE---ETTE
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch----hHHHHHHHHHHHhhcCCCCCccccccC---CCCc
Confidence            356789999999999999999999999999999988644322    348899999999999888877665532   5778


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+ +|+|.
T Consensus        80 ~~lv~e~~-~~~L~   92 (296)
T 3uzp_A           80 NVMVMELL-GPSLE   92 (296)
T ss_dssp             EEEEEECC-CCBHH
T ss_pred             eEEEEEec-CCCHH
Confidence            89999999 88874

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.29  E-value=1.3e-12  Score=99.56  Aligned_cols=93  Identities=20%  Similarity=0.425  Sum_probs=74.2

Q ss_pred             hhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH----HHHHHHHHHHHHHhcCC--CCCccceeee
Q psy360          101 ERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK----AERARFREEAEMLKGLQ--HPNIVSFYGY  174 (199)
Q Consensus       101 ~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~----~~~~~~~~E~~~l~~l~--h~niv~l~~~  174 (199)
                      ..+...+.|++.+.||+|+||.||+|.+..++..||+|.+.......    ...+.+.+|+.++++++  |+||++++++
T Consensus        37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~  116 (320)
T 3a99_A           37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW  116 (320)
T ss_dssp             ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred             ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence            33456678999999999999999999999999999999986543221    11234677999999996  5999999999


Q ss_pred             eeeeecCCceEEEEEeccCC-CCC
Q psy360          175 WEVTLTKRKYIVLVTELMTS-GTL  197 (199)
Q Consensus       175 ~~~~~~~~~~~~lv~E~~~~-G~L  197 (199)
                      +.    ..+..++||||+.+ |+|
T Consensus       117 ~~----~~~~~~lv~e~~~~~~~L  136 (320)
T 3a99_A          117 FE----RPDSFVLILERPEPVQDL  136 (320)
T ss_dssp             EE----CSSEEEEEEECCSSEEEH
T ss_pred             Ee----cCCcEEEEEEcCCCCccH
Confidence            87    77889999999986 655

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.29  E-value=7.7e-13  Score=102.00  Aligned_cols=82  Identities=17%  Similarity=0.174  Sum_probs=66.2

Q ss_pred             ccccccceeecCccceeEEEEEECC--------CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccc-------
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQ--------TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVS-------  170 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~--------~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-------  170 (199)
                      .+.|++.+.||+|+||.||+|.+..        .+..+|+|.+...       +.+.+|+.++++++||||++       
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~  113 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYS  113 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence            4689999999999999999999877        4788999998643       34789999999999999998       


Q ss_pred             --------eeeeeeeeecCCceEEEEEeccCCCCCC
Q psy360          171 --------FYGYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       171 --------l~~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                              +++++..   ..+..++||||+ +|+|.
T Consensus       114 ~~~~~i~~~~~~~~~---~~~~~~lv~e~~-~~~L~  145 (352)
T 2jii_A          114 TPLLAIPTCMGFGVH---QDKYRFLVLPSL-GRSLQ  145 (352)
T ss_dssp             CTTCSCCCCCEEEEE---TTTEEEEEEECC-CEEHH
T ss_pred             CCccCccchhhcccc---CCcEEEEEecCC-CcCHH
Confidence                    4555541   468899999999 88874

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.28  E-value=3.2e-12  Score=99.20  Aligned_cols=91  Identities=19%  Similarity=0.112  Sum_probs=58.9

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHH---HHHhcCCCCCcccee-------ee
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEA---EMLKGLQHPNIVSFY-------GY  174 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~---~~l~~l~h~niv~l~-------~~  174 (199)
                      ...|++.+.||+|+||.||+|.+..++..+|+|.+....... ...+.+.+|+   .+++. +||||++++       ++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~  139 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA  139 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence            345889999999999999999999999999999997654433 3456677785   45555 799988755       33


Q ss_pred             eeeeec-------------CCceEEEEEeccCCCCCC
Q psy360          175 WEVTLT-------------KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       175 ~~~~~~-------------~~~~~~lv~E~~~~G~L~  198 (199)
                      +.....             .....|||||||+ |+|.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~  175 (371)
T 3q60_A          140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLE  175 (371)
T ss_dssp             EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHH
T ss_pred             eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHH
Confidence            221000             0145899999999 7774

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.28  E-value=5.8e-12  Score=96.09  Aligned_cols=87  Identities=21%  Similarity=0.292  Sum_probs=71.7

Q ss_pred             hcccccccceeecCccceeEEEEEE-CCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCC------ccceeeeee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLD-TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN------IVSFYGYWE  176 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~-~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~  176 (199)
                      ...+.|++.+.||+|+||.||+|.+ ..++..+|+|.+..   .....+.+.+|+.++..++|+|      ++++++++.
T Consensus        11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~   87 (339)
T 1z57_A           11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE   87 (339)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred             CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec---CCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence            4567899999999999999999988 56788999999853   2344567888999998887654      899999887


Q ss_pred             eeecCCceEEEEEeccCCCCCC
Q psy360          177 VTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       177 ~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                          ..+..++||||+ +|+|.
T Consensus        88 ----~~~~~~lv~e~~-~~~l~  104 (339)
T 1z57_A           88 ----HHGHICIVFELL-GLSTY  104 (339)
T ss_dssp             ----ETTEEEEEEECC-CCBHH
T ss_pred             ----cCCcEEEEEcCC-CCCHH
Confidence                678999999999 77663

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.28  E-value=1.5e-11  Score=97.42  Aligned_cols=86  Identities=23%  Similarity=0.307  Sum_probs=71.1

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC------CCCCccceeeeeee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL------QHPNIVSFYGYWEV  177 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~  177 (199)
                      ....+|++.+.||+|+||.||+|.+..++..||+|.+...   ......+.+|+.++..+      +|+||+++++++. 
T Consensus        94 ~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~-  169 (429)
T 3kvw_A           94 HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT-  169 (429)
T ss_dssp             EETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEE-
T ss_pred             cccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecc-
Confidence            3456799999999999999999999999999999998642   33445677788887766      5779999999887 


Q ss_pred             eecCCceEEEEEeccCCCCC
Q psy360          178 TLTKRKYIVLVTELMTSGTL  197 (199)
Q Consensus       178 ~~~~~~~~~lv~E~~~~G~L  197 (199)
                         ..+..++||||+.+ +|
T Consensus       170 ---~~~~~~lv~e~~~~-~L  185 (429)
T 3kvw_A          170 ---FRNHICMTFELLSM-NL  185 (429)
T ss_dssp             ---ETTEEEEEECCCCC-BH
T ss_pred             ---cCCeEEEEEeccCC-CH
Confidence               67899999999974 54

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.26  E-value=9.2e-12  Score=96.42  Aligned_cols=90  Identities=18%  Similarity=0.244  Sum_probs=73.0

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-----------CCCccceee
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-----------HPNIVSFYG  173 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~  173 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+..   .....+.+.+|+.++.++.           |+||+++++
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~   93 (373)
T 1q8y_A           17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD   93 (373)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred             cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC---CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence            34679999999999999999999999999999999864   2334566888999988886           899999999


Q ss_pred             eeeeeecCCceEEEEEeccCCCCCC
Q psy360          174 YWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       174 ~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++..........++||||+ +|+|.
T Consensus        94 ~~~~~~~~~~~~~lv~e~~-~~~L~  117 (373)
T 1q8y_A           94 HFNHKGPNGVHVVMVFEVL-GENLL  117 (373)
T ss_dssp             EEEEEETTEEEEEEEECCC-CEEHH
T ss_pred             HhhccCCCCceEEEEEecC-CCCHH
Confidence            8874333344889999999 77663

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.25  E-value=7.9e-12  Score=99.10  Aligned_cols=83  Identities=22%  Similarity=0.241  Sum_probs=66.6

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..+.+...+.||+|+||+||.+. ..++..||+|.+....     .+.+.+|+.++.++ +||||+++++++.    ..+
T Consensus        13 l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~~~~~~~----~~~   82 (434)
T 2rio_A           13 LKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYCSET----TDR   82 (434)
T ss_dssp             CSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGGG-----HHHHHHHHHHHHHHTTSTTBCCEEEEEE----CSS
T ss_pred             hhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHHH-----HHHHHHHHHHHHhccCCCCcCeEEEEEe----cCC
Confidence            44566777899999999998653 4568899999886432     24578899999876 8999999999887    778


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..|||||||. |+|.
T Consensus        83 ~~~lv~E~~~-gsL~   96 (434)
T 2rio_A           83 FLYIALELCN-LNLQ   96 (434)
T ss_dssp             EEEEEECCCS-EEHH
T ss_pred             eEEEEEecCC-CCHH
Confidence            9999999996 5663

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.24  E-value=1.1e-11  Score=92.90  Aligned_cols=86  Identities=24%  Similarity=0.341  Sum_probs=67.3

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+.|++.+.||+|+||.||+|.+..++..+|+|.+....    ..+.+.+|+.++..++|+|++..+.++..   ..+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~---~~~~   79 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT----KHPQLHIESKIYKMMQGGVGIPTIRWCGA---EGDY   79 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEE---ETTE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc----cchHHHHHHHHHHHhcCCCCCCeeeeecC---CCCc
Confidence            3467999999999999999999999999999999865332    22347889999999999888877775532   6778


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .++||||+ +|+|.
T Consensus        80 ~~lv~e~~-~~~L~   92 (296)
T 4hgt_A           80 NVMVMELL-GPSLE   92 (296)
T ss_dssp             EEEEEECC-CCBHH
T ss_pred             eEEEEEcc-CCCHH
Confidence            89999999 88874

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.24  E-value=7.2e-12  Score=98.12  Aligned_cols=84  Identities=20%  Similarity=0.275  Sum_probs=64.8

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee--cCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL--TKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~  182 (199)
                      ....|++.+.||+|+||.||+|.+..++. +|+|++.....      ...+|+.+++.++||||+++++++....  ...
T Consensus        38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~  110 (394)
T 4e7w_A           38 REIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDE  110 (394)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSC
T ss_pred             ccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCc
Confidence            34578999999999999999999877766 77777653321      1236999999999999999999885321  123


Q ss_pred             ceEEEEEeccCCC
Q psy360          183 KYIVLVTELMTSG  195 (199)
Q Consensus       183 ~~~~lv~E~~~~G  195 (199)
                      ...++||||++++
T Consensus       111 ~~~~lv~e~~~~~  123 (394)
T 4e7w_A          111 VFLNLVLEYVPET  123 (394)
T ss_dssp             EEEEEEEECCSEE
T ss_pred             eEEEEEeeccCcc
Confidence            4588999999875

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.24  E-value=8.2e-12  Score=93.54  Aligned_cols=84  Identities=13%  Similarity=0.042  Sum_probs=64.5

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH----------------HHHHHHHHHHHHHhcCCCCCcc
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK----------------AERARFREEAEMLKGLQHPNIV  169 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~----------------~~~~~~~~E~~~l~~l~h~niv  169 (199)
                      ...+.+.+.||+|+||.||+|.+ .++..+|+|.+.......                .....+.+|+.++++++  | +
T Consensus        89 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~  164 (282)
T 1zar_A           89 GKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-L  164 (282)
T ss_dssp             TSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-S
T ss_pred             CeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-C
Confidence            34567779999999999999998 889999999986432111                23567899999999999  5 6


Q ss_pred             ceeeeeeeeecCCceEEEEEeccCCCCCC
Q psy360          170 SFYGYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       170 ~l~~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++.+++.     .+..|+||||++||+|.
T Consensus       165 ~v~~~~~-----~~~~~lvmE~~~g~~L~  188 (282)
T 1zar_A          165 AVPKVYA-----WEGNAVLMELIDAKELY  188 (282)
T ss_dssp             SSCCEEE-----EETTEEEEECCCCEEGG
T ss_pred             CcCeEEe-----ccceEEEEEecCCCcHH
Confidence            6666553     34569999999999985

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.23  E-value=7.9e-12  Score=95.95  Aligned_cols=59  Identities=25%  Similarity=0.526  Sum_probs=47.5

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      .....+||+.|+|||++. ..++.++|+|||||++|+|++|+.||.. .+.......+...
T Consensus       161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-~~~~~~~~~i~~~  220 (337)
T 1o6l_A          161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELILME  220 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHC
T ss_pred             cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCC-CCHHHHHHHHHcC
Confidence            345678999999999886 5699999999999999999999999976 3444555555443

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.23  E-value=3.7e-12  Score=98.41  Aligned_cols=60  Identities=22%  Similarity=0.468  Sum_probs=45.4

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhc
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      .....+||+.|+|||++. ..++.++|+|||||++|+|++|+.||.. .+....+..+....
T Consensus       180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~-~~~~~~~~~i~~~~  240 (353)
T 3txo_A          180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA-ENEDDLFEAILNDE  240 (353)
T ss_dssp             ------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCC
T ss_pred             cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC-CCHHHHHHHHHcCC
Confidence            344679999999999887 5699999999999999999999999976 45555666666543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.22  E-value=6.9e-12  Score=96.86  Aligned_cols=60  Identities=25%  Similarity=0.537  Sum_probs=49.1

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhc
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      .....+||+.|+|||++. ..++.++|+|||||++|+|++|+.||.. .+....+..+....
T Consensus       177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~-~~~~~~~~~i~~~~  237 (353)
T 2i0e_A          177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG-EDEDELFQSIMEHN  237 (353)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCC
T ss_pred             ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC-CCHHHHHHHHHhCC
Confidence            345679999999999876 5699999999999999999999999976 45555666666543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.22  E-value=5.7e-12  Score=99.96  Aligned_cols=57  Identities=26%  Similarity=0.605  Sum_probs=46.1

Q ss_pred             eeeccCCCccccccccc------ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            9 NIRTQRTPEFMAPEMYE------EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~------~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ....+||+.|||||++.      +.++.++|+|||||++|||++|+.||.. .+..+.+..++.
T Consensus       233 ~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~-~~~~~~~~~i~~  295 (437)
T 4aw2_A          233 SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA-ESLVETYGKIMN  295 (437)
T ss_dssp             CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC-SSHHHHHHHHHT
T ss_pred             cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC-CChhHHHHhhhh
Confidence            34579999999999774      3589999999999999999999999976 445555555544

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.21  E-value=9.2e-12  Score=96.86  Aligned_cols=59  Identities=27%  Similarity=0.537  Sum_probs=48.6

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      .....+||+.|+|||++. ..++.++|+|||||++|||++|..||.. .+....+..+...
T Consensus       195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~-~~~~~~~~~i~~~  254 (373)
T 2r5t_A          195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS-RNTAEMYDNILNK  254 (373)
T ss_dssp             CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC-SBHHHHHHHHHHS
T ss_pred             ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHhc
Confidence            345679999999999886 5699999999999999999999999976 4555566666554

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.20  E-value=1.8e-11  Score=98.27  Aligned_cols=86  Identities=24%  Similarity=0.315  Sum_probs=68.4

Q ss_pred             hcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCcc-ceeeeeeeeecCC
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV-SFYGYWEVTLTKR  182 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~  182 (199)
                      ...+.|++.+.||+|+||.||+|.+..++..||+|.+......    ..+.+|+.++..+.|.+.+ .+..++.    ..
T Consensus         4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~----~~   75 (483)
T 3sv0_A            4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGV----EG   75 (483)
T ss_dssp             EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEE----ET
T ss_pred             CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEe----eC
Confidence            3457899999999999999999999999999999987643322    2378899999999875544 4544544    67


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..+|||||+ +|+|.
T Consensus        76 ~~~~lvme~~-g~sL~   90 (483)
T 3sv0_A           76 DYNVLVMDLL-GPSLE   90 (483)
T ss_dssp             TEEEEEEECC-CCBHH
T ss_pred             CEEEEEEECC-CCCHH
Confidence            8889999999 88874

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.20  E-value=6.5e-12  Score=98.85  Aligned_cols=58  Identities=21%  Similarity=0.459  Sum_probs=46.3

Q ss_pred             eeeccCCCcccccccccc-c----CCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360            9 NIRTQRTPEFMAPEMYEE-H----YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~~-~----~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      ....+||+.|+|||++.+ .    ++.++|+|||||++|+|++|+.||.. .+....+..+...
T Consensus       226 ~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~-~~~~~~~~~i~~~  288 (410)
T 3v8s_A          226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTYSKIMNH  288 (410)
T ss_dssp             CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC-SSHHHHHHHHHTH
T ss_pred             ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC-CChhhHHHHHHhc
Confidence            346799999999998752 2    78999999999999999999999976 4455555555543

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.20  E-value=7.3e-12  Score=98.62  Aligned_cols=56  Identities=27%  Similarity=0.550  Sum_probs=45.6

Q ss_pred             eeccCCCccccccccc--------ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYE--------EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~--------~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...+||+.|+|||++.        +.++.++|+|||||++|||++|+.||.. .+..+.+..++.
T Consensus       221 ~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~-~~~~~~~~~i~~  284 (412)
T 2vd5_A          221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA-DSTAETYGKIVH  284 (412)
T ss_dssp             SSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCC-SSHHHHHHHHHT
T ss_pred             ceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCC-CCHHHHHHHHHh
Confidence            3569999999999875        3589999999999999999999999976 444555555554

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.19  E-value=1.1e-11  Score=100.82  Aligned_cols=82  Identities=18%  Similarity=0.120  Sum_probs=55.2

Q ss_pred             cceeecCccceeEEEEEECCCCcEEEEEEecccccC-HH-----HHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          111 FEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KA-----ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       111 ~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+.||+|+||.||+|..  .+..+++|....+... ..     ..+.+.+|+.++++++||||+++..++.    ..+.
T Consensus       340 ~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~----~~~~  413 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDV----DLDN  413 (540)
T ss_dssp             --------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEE----ETTT
T ss_pred             CCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEE----eCCc
Confidence            356899999999999943  4567788876443322 11     2456899999999999999996655554    4455


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .|||||||+||+|.
T Consensus       414 ~~lVmE~~~ggsL~  427 (540)
T 3en9_A          414 KRIMMSYINGKLAK  427 (540)
T ss_dssp             TEEEEECCCSEEHH
T ss_pred             cEEEEECCCCCCHH
Confidence            69999999999874

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.18  E-value=3.8e-11  Score=92.19  Aligned_cols=85  Identities=20%  Similarity=0.285  Sum_probs=69.8

Q ss_pred             hcccccccceeecCccceeEEEEEECCCC-cEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCC------ccceeeeee
Q psy360          104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTG-VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN------IVSFYGYWE  176 (199)
Q Consensus       104 ~~~~~~~~~~~lG~G~fg~v~~~~~~~~~-~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~  176 (199)
                      ...+.|++.+.||+|+||.||+|.+..++ ..||+|.+..   .....+.+.+|+.+++.++|+|      ++.+.+++.
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~   92 (355)
T 2eu9_A           16 WLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN   92 (355)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred             eecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc---cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee
Confidence            34578999999999999999999987776 6899999853   2345567888999999887766      888888887


Q ss_pred             eeecCCceEEEEEeccCCC
Q psy360          177 VTLTKRKYIVLVTELMTSG  195 (199)
Q Consensus       177 ~~~~~~~~~~lv~E~~~~G  195 (199)
                          ..+..+|||||+.++
T Consensus        93 ----~~~~~~lv~e~~~~~  107 (355)
T 2eu9_A           93 ----FHGHMCIAFELLGKN  107 (355)
T ss_dssp             ----ETTEEEEEEECCCCB
T ss_pred             ----eCCeEEEEEeccCCC
Confidence                678899999999543

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.18  E-value=5.1e-11  Score=92.81  Aligned_cols=87  Identities=26%  Similarity=0.298  Sum_probs=71.2

Q ss_pred             hhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CC-----Cccceeeeee
Q psy360          103 ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HP-----NIVSFYGYWE  176 (199)
Q Consensus       103 ~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~  176 (199)
                      ....++|++.+.||+|+||.||+|.+..++..||+|.+...   ......+..|+.++..+. |+     +|+++++++.
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  126 (382)
T 2vx3_A           50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM  126 (382)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred             CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence            34557899999999999999999999999999999998642   334566778888888875 55     4899999887


Q ss_pred             eeecCCceEEEEEeccCCCCC
Q psy360          177 VTLTKRKYIVLVTELMTSGTL  197 (199)
Q Consensus       177 ~~~~~~~~~~lv~E~~~~G~L  197 (199)
                          ..+..+|||||+.+ +|
T Consensus       127 ----~~~~~~lv~e~~~~-~L  142 (382)
T 2vx3_A          127 ----FRNHLCLVFEMLSY-NL  142 (382)
T ss_dssp             ----ETTEEEEEEECCCC-BH
T ss_pred             ----cCCceEEEEecCCC-CH
Confidence                67899999999974 65

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.18  E-value=1.4e-11  Score=94.82  Aligned_cols=58  Identities=24%  Similarity=0.509  Sum_probs=47.3

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      ....+||+.|+|||++. ..++.++|+|||||++|+|++|+.||.. .+....+..+...
T Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-~~~~~~~~~i~~~  233 (345)
T 1xjd_A          175 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG-QDEEELFHSIRMD  233 (345)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHC
T ss_pred             ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC-CCHHHHHHHHHhC
Confidence            45679999999999876 5699999999999999999999999976 4455555555443

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.18  E-value=1.6e-11  Score=93.47  Aligned_cols=58  Identities=26%  Similarity=0.602  Sum_probs=47.0

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhc
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++|+|++|+.||.. .+....+..+....
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~-~~~~~~~~~i~~~~  219 (318)
T 1fot_A          161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD-SNTMKTYEKILNAE  219 (318)
T ss_dssp             CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC-SSHHHHHHHHHHCC
T ss_pred             ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC-CCHHHHHHHHHhCC
Confidence            3568999999999876 5699999999999999999999999976 34445555555543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.18  E-value=1.2e-11  Score=103.04  Aligned_cols=61  Identities=25%  Similarity=0.545  Sum_probs=50.0

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhcc
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI   69 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~   69 (199)
                      .....+||+.|||||++. ..++.++|+|||||++|||++|+.||.. .+..+.+..+.....
T Consensus       498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~-~~~~~~~~~i~~~~~  559 (674)
T 3pfq_A          498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG-EDEDELFQSIMEHNV  559 (674)
T ss_dssp             CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHSSCC
T ss_pred             ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC-CCHHHHHHHHHhCCC
Confidence            345679999999999887 6799999999999999999999999976 455566666665443

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.16  E-value=2e-11  Score=94.53  Aligned_cols=58  Identities=21%  Similarity=0.374  Sum_probs=46.7

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      ....+||+.|+|||++. ..++.++|+|||||++|+|++|..||... +....+..+...
T Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~-~~~~~~~~i~~~  233 (361)
T 2yab_A          175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-TKQETLANITAV  233 (361)
T ss_dssp             CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHTT
T ss_pred             cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhc
Confidence            34678999999999887 57999999999999999999999999763 444454555443

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.15  E-value=2.7e-11  Score=93.80  Aligned_cols=58  Identities=19%  Similarity=0.464  Sum_probs=46.7

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhc
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++|+|++|..||... +....+..+....
T Consensus       188 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~-~~~~~~~~i~~~~  246 (362)
T 2bdw_A          188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE-DQHRLYAQIKAGA  246 (362)
T ss_dssp             CCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTC
T ss_pred             ccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHhCC
Confidence            4568999999999887 56999999999999999999999999763 4444555555443

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.15  E-value=2e-11  Score=95.64  Aligned_cols=46  Identities=35%  Similarity=0.567  Sum_probs=41.2

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      .....+||+.|+|||++. ..++.++|+|||||++|+|++|+.||..
T Consensus       209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~  255 (396)
T 4dc2_A          209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  255 (396)
T ss_dssp             CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred             ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence            455679999999999887 5699999999999999999999999964

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.15  E-value=1.1e-11  Score=95.95  Aligned_cols=47  Identities=15%  Similarity=0.218  Sum_probs=41.1

Q ss_pred             eeeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360            7 YVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus         7 ~~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ......+||+.|||||++. ..++.++|+|||||++|+|++|+.||..
T Consensus       240 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~  287 (365)
T 3e7e_A          240 TIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK  287 (365)
T ss_dssp             EEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred             ceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence            3445678999999999887 5599999999999999999999999854

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.15  E-value=1.8e-11  Score=95.78  Aligned_cols=57  Identities=16%  Similarity=0.352  Sum_probs=44.6

Q ss_pred             eeccCCCcccccccccc------------cCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYEE------------HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~------------~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...+||+.|+|||++.+            .++.++|+|||||++|+|++|+.||.........+..++.
T Consensus       214 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~  282 (390)
T 2zmd_A          214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID  282 (390)
T ss_dssp             CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHC
T ss_pred             CCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhC
Confidence            35689999999998753            5889999999999999999999999765444344444443

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.13  E-value=3.5e-11  Score=95.62  Aligned_cols=59  Identities=19%  Similarity=0.469  Sum_probs=47.4

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhcc
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI   69 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~   69 (199)
                      ...+||+.|+|||++. ..++.++|+||+||++|+|++|..||.. .+....+..+.....
T Consensus       171 ~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~-~~~~~~~~~i~~~~~  230 (444)
T 3soa_A          171 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD-EDQHRLYQQIKAGAY  230 (444)
T ss_dssp             CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCC-SSHHHHHHHHHHTCC
T ss_pred             ecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC-ccHHHHHHHHHhCCC
Confidence            4568999999999887 5699999999999999999999999976 344455555555443

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.13  E-value=3e-11  Score=93.09  Aligned_cols=59  Identities=19%  Similarity=0.417  Sum_probs=44.9

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhc
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++|+|++|..||.........+..+....
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~  267 (349)
T 2w4o_A          208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE  267 (349)
T ss_dssp             -----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTC
T ss_pred             ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCC
Confidence            4568999999999887 5699999999999999999999999987655555555555543

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.13  E-value=5.5e-11  Score=94.19  Aligned_cols=82  Identities=18%  Similarity=0.260  Sum_probs=64.7

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~  183 (199)
                      ....|...+.||+|+||.|+.. ...++..||+|.+.....     ..+.+|+.+++++ +||||+++++++.    ..+
T Consensus        22 ~~~~y~~~~~LG~G~~G~V~~~-~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~----~~~   91 (432)
T 3p23_A           22 GKISFCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEK----DRQ   91 (432)
T ss_dssp             TTEEEEEEEEEEECGGGCEEEE-EESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEE----ETT
T ss_pred             ccEEEecCCeeecCcCEEEEEE-EEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEe----cCC
Confidence            3456888999999999996633 345678899999864322     1256799999999 7999999999887    678


Q ss_pred             eEEEEEeccCCCCC
Q psy360          184 YIVLVTELMTSGTL  197 (199)
Q Consensus       184 ~~~lv~E~~~~G~L  197 (199)
                      ..|||||||.+ +|
T Consensus        92 ~~~lv~E~~~g-~L  104 (432)
T 3p23_A           92 FQYIAIELCAA-TL  104 (432)
T ss_dssp             EEEEEEECCSE-EH
T ss_pred             EEEEEEECCCC-CH
Confidence            89999999974 54

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.13  E-value=2.4e-11  Score=93.68  Aligned_cols=58  Identities=36%  Similarity=0.577  Sum_probs=47.4

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhc
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|+.||.. .+....+..+....
T Consensus       196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-~~~~~~~~~i~~~~  254 (350)
T 1rdq_E          196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGK  254 (350)
T ss_dssp             CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCC
T ss_pred             ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC-CCHHHHHHHHHcCC
Confidence            3568999999999876 5699999999999999999999999976 44555556665543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.12  E-value=4.3e-11  Score=96.16  Aligned_cols=59  Identities=24%  Similarity=0.375  Sum_probs=46.9

Q ss_pred             eeeccCCCcccccccccccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhc
Q psy360            9 NIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      ....+||+.|+|||++.+.++.++|+||+||++|+|++|..||.. .+....+..+....
T Consensus       180 ~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~-~~~~~~~~~i~~~~  238 (486)
T 3mwu_A          180 MKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYG-KNEYDILKRVETGK  238 (486)
T ss_dssp             --CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHTC
T ss_pred             cCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhCC
Confidence            345689999999999988899999999999999999999999976 34444445554443

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.12  E-value=2.6e-11  Score=94.67  Aligned_cols=48  Identities=17%  Similarity=0.239  Sum_probs=40.0

Q ss_pred             eeeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      .+..+||+.|+|||++.  ..++.++|+|||||++++|++|+.||.....
T Consensus       187 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~  236 (388)
T 3oz6_A          187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST  236 (388)
T ss_dssp             ---CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             ccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            34569999999999775  4689999999999999999999999987433

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.12  E-value=4.3e-11  Score=92.10  Aligned_cols=46  Identities=35%  Similarity=0.567  Sum_probs=41.0

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      .....+||+.|+|||++. ..++.++|+|||||++|+|++|+.||..
T Consensus       166 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  212 (345)
T 3a8x_A          166 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  212 (345)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence            345679999999999887 5699999999999999999999999964

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.11  E-value=3.8e-11  Score=95.43  Aligned_cols=57  Identities=26%  Similarity=0.556  Sum_probs=46.1

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ....+||+.|+|||++. ..++.++|+|||||++++|++|+.||.. .+.......+..
T Consensus       306 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-~~~~~~~~~i~~  363 (446)
T 4ejn_A          306 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELILM  363 (446)
T ss_dssp             -CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHH
T ss_pred             cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC-CCHHHHHHHHHh
Confidence            44678999999999876 6799999999999999999999999976 344445455444

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.11  E-value=4.6e-11  Score=96.16  Aligned_cols=60  Identities=23%  Similarity=0.378  Sum_probs=48.6

Q ss_pred             eeeccCCCcccccccccccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhcc
Q psy360            9 NIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI   69 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~   69 (199)
                      ....+||+.|+|||++.+.++.++|+|||||++|+|++|..||.. .+..+.+..+.....
T Consensus       195 ~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~-~~~~~~~~~i~~~~~  254 (494)
T 3lij_A          195 MKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGG-QTDQEILRKVEKGKY  254 (494)
T ss_dssp             BCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHTCC
T ss_pred             ccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhCCC
Confidence            345689999999999888899999999999999999999999976 344455555555433

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.11  E-value=4.9e-11  Score=96.88  Aligned_cols=45  Identities=40%  Similarity=0.614  Sum_probs=40.6

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++|+|++|+.||...
T Consensus       347 ~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~  392 (543)
T 3c4z_A          347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR  392 (543)
T ss_dssp             CCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred             ccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence            3569999999999887 56999999999999999999999999764

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.10  E-value=7.9e-11  Score=88.17  Aligned_cols=56  Identities=75%  Similarity=1.244  Sum_probs=47.0

Q ss_pred             eeccCCCcccccccccccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ....||+.|+|||++.+.++.++|+||||+++++|++|+.||............+.
T Consensus       188 ~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~  243 (290)
T 1t4h_A          188 KAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT  243 (290)
T ss_dssp             EESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHT
T ss_pred             ccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHh
Confidence            35679999999999888899999999999999999999999987666555544433

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.10  E-value=4.8e-11  Score=89.86  Aligned_cols=47  Identities=32%  Similarity=0.564  Sum_probs=41.2

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++|+|++|+.||.....
T Consensus       174 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  221 (297)
T 3fxz_A          174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP  221 (297)
T ss_dssp             CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            4568999999999876 5699999999999999999999999976433

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.10  E-value=3.9e-11  Score=91.72  Aligned_cols=59  Identities=19%  Similarity=0.426  Sum_probs=45.9

Q ss_pred             eeeccCCCcccccccccc-cC-CCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhc
Q psy360            9 NIRTQRTPEFMAPEMYEE-HY-DESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~~-~~-~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      ....+||+.|+|||++.+ .+ +.++|+|||||++++|++|+.||.. .+.......+....
T Consensus       170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~-~~~~~~~~~i~~~~  230 (328)
T 3fe3_A          170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLRGK  230 (328)
T ss_dssp             GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCC
T ss_pred             cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-CCHHHHHHHHHhCC
Confidence            345689999999998864 44 5799999999999999999999976 44555555555443

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.09  E-value=5.4e-11  Score=90.80  Aligned_cols=57  Identities=25%  Similarity=0.364  Sum_probs=46.0

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++|+|++|+.||.. .+.......+...
T Consensus       179 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~-~~~~~~~~~i~~~  236 (327)
T 3a62_A          179 HTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG-ENRKKTIDKILKC  236 (327)
T ss_dssp             CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC-SSHHHHHHHHHHT
T ss_pred             cccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC-CCHHHHHHHHHhC
Confidence            3568999999999876 5699999999999999999999999976 3444455555543

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.09  E-value=6e-11  Score=94.81  Aligned_cols=47  Identities=26%  Similarity=0.256  Sum_probs=38.9

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      .+..+||+.|+|||++. ..++.++|+|||||++++|++|+.||....
T Consensus       220 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~  267 (464)
T 3ttj_A          220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD  267 (464)
T ss_dssp             C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            45679999999999876 579999999999999999999999997643

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.09  E-value=3.4e-11  Score=96.64  Aligned_cols=58  Identities=26%  Similarity=0.371  Sum_probs=47.4

Q ss_pred             eeccCCCcccccccccccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhc
Q psy360           10 IRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      ...+||+.|+|||++.+.++.++|+||+||++|+|++|..||.. .+....+..+....
T Consensus       186 ~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~-~~~~~~~~~i~~~~  243 (484)
T 3nyv_A          186 KDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNG-ANEYDILKKVEKGK  243 (484)
T ss_dssp             HHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCC
T ss_pred             ccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHcCC
Confidence            35689999999999888899999999999999999999999976 34444555555443

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.08  E-value=6.6e-11  Score=92.36  Aligned_cols=47  Identities=28%  Similarity=0.449  Sum_probs=40.6

Q ss_pred             eeeeccCCCccccccccc----ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360            8 VNIRTQRTPEFMAPEMYE----EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~----~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      .....+||+.|+|||++.    ..++.++|+|||||++|+|++|+.||...
T Consensus       170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~  220 (384)
T 4fr4_A          170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR  220 (384)
T ss_dssp             CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred             ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCC
Confidence            345679999999999875    24899999999999999999999999753

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.08  E-value=6.8e-12  Score=95.13  Aligned_cols=45  Identities=38%  Similarity=0.656  Sum_probs=36.8

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ....||+.|+|||++. ..++.++|+|||||++++|++|+.||...
T Consensus       197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~  242 (309)
T 3p86_A          197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL  242 (309)
T ss_dssp             -----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred             ccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            3568999999999887 56899999999999999999999999764

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.08  E-value=5.1e-11  Score=93.50  Aligned_cols=46  Identities=28%  Similarity=0.504  Sum_probs=36.7

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ...+||+.|+|||++. +.++.++|+|||||++|+|++|+.||....
T Consensus       221 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  267 (400)
T 1nxk_A          221 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH  267 (400)
T ss_dssp             ------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCT
T ss_pred             ccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence            4678999999999886 679999999999999999999999997643

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.08  E-value=8.3e-11  Score=89.74  Aligned_cols=55  Identities=22%  Similarity=0.382  Sum_probs=44.3

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|..||... .....+..+.
T Consensus       175 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~~~  230 (326)
T 2y0a_A          175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-TKQETLANVS  230 (326)
T ss_dssp             CCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHH
T ss_pred             ccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC-CHHHHHHHHH
Confidence            4568999999999887 57999999999999999999999999763 3334444433

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.08  E-value=6.3e-11  Score=90.28  Aligned_cols=59  Identities=17%  Similarity=0.347  Sum_probs=46.8

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhc
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      ....+||+.|+|||++. ..++.++|+|||||++|+|++|..||... +.......+....
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~  219 (321)
T 1tki_A          160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE-TNQQIIENIMNAE  219 (321)
T ss_dssp             EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHHTC
T ss_pred             cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCC-CHHHHHHHHHcCC
Confidence            34568999999999887 45899999999999999999999999763 4444555555443

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.07  E-value=5.9e-11  Score=91.15  Aligned_cols=56  Identities=18%  Similarity=0.351  Sum_probs=41.7

Q ss_pred             eeccCCCccccccccc------------ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE------------EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~------------~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...+||+.|+|||++.            +.++.++|+|||||++++|++|+.||.........+..++
T Consensus       167 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~  234 (343)
T 3dbq_A          167 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII  234 (343)
T ss_dssp             ---CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH
T ss_pred             CCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHh
Confidence            3568999999999874            4588999999999999999999999976544433333333

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.06  E-value=8.7e-11  Score=91.34  Aligned_cols=57  Identities=19%  Similarity=0.398  Sum_probs=46.1

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhc
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      ..+||+.|+|||++. +.++.++|+|||||++++|++|+.||... +....+..+....
T Consensus       247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~-~~~~~~~~i~~~~  304 (373)
T 2x4f_A          247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD-NDAETLNNILACR  304 (373)
T ss_dssp             CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHHTC
T ss_pred             cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhcc
Confidence            457999999999876 56899999999999999999999999763 4444555555543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.06  E-value=9.6e-11  Score=90.30  Aligned_cols=56  Identities=25%  Similarity=0.525  Sum_probs=44.9

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++|+|++|+.||...  ....+..+...
T Consensus       191 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~i~~~  247 (351)
T 3c0i_A          191 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT--KERLFEGIIKG  247 (351)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS--HHHHHHHHHHT
T ss_pred             cCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc--HHHHHHHHHcC
Confidence            4568999999999886 56999999999999999999999999763  33444444443

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.06  E-value=7.7e-11  Score=91.81  Aligned_cols=55  Identities=22%  Similarity=0.393  Sum_probs=44.3

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|+.||... +....+..+.
T Consensus       216 ~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~-~~~~~~~~i~  271 (382)
T 2vx3_A          216 YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA-NEVDQMNKIV  271 (382)
T ss_dssp             CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHH
T ss_pred             ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHH
Confidence            3568999999999876 56999999999999999999999999864 3333444443

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.06  E-value=9.7e-11  Score=94.51  Aligned_cols=58  Identities=26%  Similarity=0.358  Sum_probs=47.2

Q ss_pred             eeeccCCCcccccccccccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360            9 NIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      ....+||+.|+|||++.+.++.++|+||+||++|+|++|..||.. .+....+..+...
T Consensus       205 ~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~-~~~~~~~~~i~~~  262 (504)
T 3q5i_A          205 LRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGG-QNDQDIIKKVEKG  262 (504)
T ss_dssp             BCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHC
T ss_pred             cccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHcC
Confidence            345689999999999888899999999999999999999999976 3444444444443

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.06  E-value=6.9e-11  Score=89.28  Aligned_cols=57  Identities=21%  Similarity=0.239  Sum_probs=45.2

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ....+||+.|+|||++. ..++.++|+|||||++++|++|+.||... +....+..+..
T Consensus       176 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~-~~~~~~~~i~~  233 (308)
T 3g33_A          176 LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN-SEADQLGKIFD  233 (308)
T ss_dssp             SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCS-SHHHHHHHHHH
T ss_pred             cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHH
Confidence            34578999999999875 67999999999999999999999999764 33344444433

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.06  E-value=9e-11  Score=95.99  Aligned_cols=82  Identities=12%  Similarity=-0.035  Sum_probs=58.5

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEeccccc----C----HHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCc
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL----N----KAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~----~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~  183 (199)
                      ...+.|++|.+..++..-.|..+++|.+.....    .    ....+.|.+|+.+|+++ .|+||++++++++    +++
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~e----d~~  315 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGE----NAQ  315 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEE----CSS
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE----ECC
Confidence            345667777666666666788899999864321    1    22346799999999999 6999999999998    788


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..|||||||+||+|.
T Consensus       316 ~~yLVMEyv~G~~L~  330 (569)
T 4azs_A          316 SGWLVMEKLPGRLLS  330 (569)
T ss_dssp             EEEEEEECCCSEEHH
T ss_pred             EEEEEEecCCCCcHH
Confidence            999999999999985

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.05  E-value=6.6e-11  Score=88.96  Aligned_cols=46  Identities=28%  Similarity=0.505  Sum_probs=37.6

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      ..+||+.|+|||.+. ..++.++|+||||+++|+|++|+.||.....
T Consensus       171 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~  217 (294)
T 4eqm_A          171 HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA  217 (294)
T ss_dssp             ----CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH
T ss_pred             ccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh
Confidence            467999999999876 5689999999999999999999999976433

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.05  E-value=7.2e-11  Score=93.19  Aligned_cols=48  Identities=23%  Similarity=0.339  Sum_probs=41.2

Q ss_pred             eeeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      ....+||+.|+|||++.  ..++.++|+|||||++|||++|+.||.....
T Consensus       213 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~  262 (420)
T 1j1b_A          213 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG  262 (420)
T ss_dssp             CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence            34568999999999875  3699999999999999999999999987443

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.05  E-value=4.6e-11  Score=91.85  Aligned_cols=60  Identities=27%  Similarity=0.483  Sum_probs=46.9

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC--ChhHHHHHHHhhc
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI--GPAQIYKKVVSVS   68 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~--~~~~~~~~i~~~~   68 (199)
                      ....+||+.|+|||++. ..++.++|+|||||++|+|++|..||....  ...+.+..+....
T Consensus       177 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~  239 (342)
T 2qr7_A          177 LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK  239 (342)
T ss_dssp             BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCC
T ss_pred             eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCC
Confidence            34568999999999887 458999999999999999999999997532  3344555555443

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.05  E-value=1.5e-10  Score=86.00  Aligned_cols=56  Identities=18%  Similarity=0.325  Sum_probs=45.5

Q ss_pred             eeccCCCcccccccccccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ....||+.|+|||++.+.++.++|+||||+++++|++|+.||... +.......+..
T Consensus       166 ~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~~  221 (277)
T 3f3z_A          166 RTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAP-TDSEVMLKIRE  221 (277)
T ss_dssp             CCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH
T ss_pred             hccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCC-CHHHHHHHHHh
Confidence            356799999999998888999999999999999999999999763 33344444443

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.05  E-value=6.3e-11  Score=91.71  Aligned_cols=44  Identities=20%  Similarity=0.309  Sum_probs=39.4

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ..+||+.|+|||++. ..++.++|+|||||++|+|++|+.||...
T Consensus       220 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~  264 (364)
T 3op5_A          220 CHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN  264 (364)
T ss_dssp             CCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             ccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence            446999999999887 45999999999999999999999999853

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.04  E-value=1.5e-10  Score=89.23  Aligned_cols=45  Identities=24%  Similarity=0.361  Sum_probs=40.2

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ....||+.|+|||++. ..++.++|+|||||++++|++|+.||...
T Consensus       217 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  262 (360)
T 3llt_A          217 GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH  262 (360)
T ss_dssp             CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence            3568899999999876 57999999999999999999999999764

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.04  E-value=1.4e-10  Score=90.54  Aligned_cols=57  Identities=23%  Similarity=0.283  Sum_probs=45.3

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|..||... +....+..+...
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~-~~~~~~~~i~~~  265 (387)
T 1kob_A          208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE-DDLETLQNVKRC  265 (387)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHHC
T ss_pred             eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC-CHHHHHHHHHhC
Confidence            4568999999999886 56999999999999999999999999763 333444444443

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.03  E-value=9.2e-11  Score=92.82  Aligned_cols=46  Identities=17%  Similarity=0.200  Sum_probs=40.6

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|..||....
T Consensus       257 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~  303 (429)
T 3kvw_A          257 YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED  303 (429)
T ss_dssp             CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence            3568999999999876 569999999999999999999999997643

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.03  E-value=1e-10  Score=88.61  Aligned_cols=44  Identities=25%  Similarity=0.499  Sum_probs=38.6

Q ss_pred             eeccCCCcccccccccccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ....||+.|+|||++.+.++.++|+|||||++++|++|..|+..
T Consensus       214 ~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~  257 (311)
T 3p1a_A          214 EVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHG  257 (311)
T ss_dssp             -CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred             cccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            35579999999999888899999999999999999999776644

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.03  E-value=1.5e-10  Score=88.72  Aligned_cols=57  Identities=23%  Similarity=0.409  Sum_probs=42.8

Q ss_pred             eeeccCCCccccccccc---ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            9 NIRTQRTPEFMAPEMYE---EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~---~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      .....||+.|+|||++.   +.++.++|+|||||++++|++|+.||... +.......+..
T Consensus       231 ~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~~~~  290 (345)
T 3hko_A          231 MTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGV-NDADTISQVLN  290 (345)
T ss_dssp             ----CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH
T ss_pred             ccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC-ChHHHHHHHHh
Confidence            34568999999999775   46899999999999999999999999764 33344444444

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.03  E-value=5.7e-11  Score=90.67  Aligned_cols=45  Identities=13%  Similarity=0.166  Sum_probs=40.6

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|+.||...
T Consensus       175 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~  220 (330)
T 2izr_A          175 KSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGL  220 (330)
T ss_dssp             CCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             CCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccc
Confidence            4668999999999877 56999999999999999999999999864

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.02  E-value=1.6e-10  Score=88.01  Aligned_cols=45  Identities=33%  Similarity=0.612  Sum_probs=40.2

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...+||+.|+|||++. +.++.++|+|||||++++|++|+.||...
T Consensus       199 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~  244 (321)
T 2c30_A          199 KSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD  244 (321)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             ccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            4568999999999876 56999999999999999999999999763

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.01  E-value=1.1e-10  Score=89.45  Aligned_cols=46  Identities=22%  Similarity=0.424  Sum_probs=39.7

Q ss_pred             eeeccCCCccccccccccc--CCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYEEH--YDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~~~--~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ....+||+.|+|||++.+.  .+.++|+|||||++++|++|+.||...
T Consensus       164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~  211 (336)
T 3h4j_B          164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE  211 (336)
T ss_dssp             TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCS
T ss_pred             cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCc
Confidence            3456899999999988743  478999999999999999999999753

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.01  E-value=3.5e-10  Score=85.01  Aligned_cols=46  Identities=33%  Similarity=0.546  Sum_probs=39.1

Q ss_pred             eeeccCCCccccccccccc----CCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYEEH----YDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~~~----~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      .....||+.|+|||.+.+.    .+.++|+|||||++++|++|+.||...
T Consensus       194 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~  243 (298)
T 2zv2_A          194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE  243 (298)
T ss_dssp             ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence            3456899999999988632    478899999999999999999999763

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.01  E-value=1.3e-10  Score=91.74  Aligned_cols=54  Identities=20%  Similarity=0.377  Sum_probs=38.3

Q ss_pred             eeeccCCCccccccccc----ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHH
Q psy360            9 NIRTQRTPEFMAPEMYE----EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYK   62 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~----~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~   62 (199)
                      ....+||+.|+|||++.    ..++.++|+|||||++++|++|+.||...........
T Consensus       298 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~  355 (419)
T 3i6u_A          298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD  355 (419)
T ss_dssp             -------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHH
T ss_pred             ccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHH
Confidence            44678999999999774    4588899999999999999999999976544433333

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.01  E-value=1.6e-11  Score=91.06  Aligned_cols=45  Identities=24%  Similarity=0.496  Sum_probs=38.2

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ...||+.|+|||.+. ..++.++|+||||+++++|++|+.||....
T Consensus       173 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  218 (271)
T 3dtc_A          173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID  218 (271)
T ss_dssp             ---CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred             CCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            457999999999876 569999999999999999999999997643

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.00  E-value=1.1e-10  Score=88.57  Aligned_cols=48  Identities=29%  Similarity=0.690  Sum_probs=40.8

Q ss_pred             eeccCCCccccccccc---------ccCCCcCcchhHHHHHHHHHhCCCCCCCCCCh
Q psy360           10 IRTQRTPEFMAPEMYE---------EHYDESVDVYAFGMCMLEMSTSEYPYMECIGP   57 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~---------~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~   57 (199)
                      ...+||+.|+|||++.         ..++.++|+|||||++++|++|+.||......
T Consensus       173 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~  229 (319)
T 4euu_A          173 VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP  229 (319)
T ss_dssp             CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCG
T ss_pred             eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc
Confidence            3567999999999763         56899999999999999999999999764443

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.00  E-value=1.7e-10  Score=89.56  Aligned_cols=47  Identities=26%  Similarity=0.252  Sum_probs=36.3

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ....+||+.|+|||++. ..++.++|+|||||++++|++|+.||....
T Consensus       183 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  230 (371)
T 2xrw_A          183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD  230 (371)
T ss_dssp             -------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            34568999999999876 569999999999999999999999997643

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.00  E-value=2.3e-10  Score=86.87  Aligned_cols=54  Identities=20%  Similarity=0.302  Sum_probs=43.2

Q ss_pred             eccCCCcccccccccc--cCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYEE--HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~~--~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ..+||+.|+|||++.+  .++.++|+|||||++++|++|+.||... +....+..+.
T Consensus       167 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~i~  222 (317)
T 2pmi_A          167 SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT-NDEEQLKLIF  222 (317)
T ss_dssp             CCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHH
T ss_pred             CCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHH
Confidence            4588999999998753  5899999999999999999999999764 3333444443

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.00  E-value=2.1e-10  Score=86.03  Aligned_cols=57  Identities=16%  Similarity=0.272  Sum_probs=46.0

Q ss_pred             eeccCCCccccccccc-cc-CCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYE-EH-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~-~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ....||+.|+|||++. .. ++.++|+|||||++++|++|..|+....+....+..+..
T Consensus       159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~  217 (292)
T 3o0g_A          159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR  217 (292)
T ss_dssp             CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHH
T ss_pred             cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHH
Confidence            3458899999999875 33 899999999999999999999998776666665555544

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.00  E-value=8.2e-11  Score=88.26  Aligned_cols=46  Identities=13%  Similarity=0.153  Sum_probs=40.6

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ....||+.|+|||++. ..++.++|+|||||++++|++|+.||....
T Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  222 (298)
T 1csn_A          176 KNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK  222 (298)
T ss_dssp             CCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             cCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhh
Confidence            3567999999999876 568999999999999999999999997643

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.00  E-value=1.6e-10  Score=90.50  Aligned_cols=48  Identities=21%  Similarity=0.360  Sum_probs=41.2

Q ss_pred             eeeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      .....||+.|+|||++.  ..++.++|+|||||++++|++|+.||.....
T Consensus       198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~  247 (394)
T 4e7w_A          198 NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG  247 (394)
T ss_dssp             CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            34568899999999775  3599999999999999999999999987443

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.00  E-value=3.2e-10  Score=84.49  Aligned_cols=57  Identities=19%  Similarity=0.466  Sum_probs=45.2

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      ....||+.|+|||++. ..++.++|+||||+++++|++|+.||... +.......+...
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~-~~~~~~~~~~~~  222 (284)
T 3kk8_A          165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE-DQHRLYAQIKAG  222 (284)
T ss_dssp             CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHT
T ss_pred             cCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCC-chhHHHHHHHhc
Confidence            3468999999999876 56899999999999999999999999763 444444444443

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.00  E-value=1.2e-10  Score=88.73  Aligned_cols=56  Identities=25%  Similarity=0.395  Sum_probs=44.0

Q ss_pred             eeccCCCcccccccccc-c-CCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYEE-H-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~-~-~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...+||+.|+|||++.+ . .+.++|+|||||++++|++|+.||.........+..+.
T Consensus       165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~  222 (323)
T 3tki_A          165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK  222 (323)
T ss_dssp             CSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH
T ss_pred             CCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh
Confidence            35689999999998763 3 47899999999999999999999987555434444333

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.00  E-value=9.6e-11  Score=95.64  Aligned_cols=47  Identities=30%  Similarity=0.413  Sum_probs=41.5

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ....+||+.|+|||++. ..++.++|+|||||++|+|++|+.||....
T Consensus       342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~  389 (576)
T 2acx_A          342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK  389 (576)
T ss_dssp             EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSS
T ss_pred             ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence            34569999999999887 569999999999999999999999997643

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.99  E-value=2.4e-10  Score=88.62  Aligned_cols=46  Identities=26%  Similarity=0.368  Sum_probs=37.9

Q ss_pred             eeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ...+||+.|+|||++.  ..++.++|+|||||++++|++|+.||....
T Consensus       187 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  234 (367)
T 2fst_X          187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD  234 (367)
T ss_dssp             ----CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             CCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            4568999999999775  469999999999999999999999997643

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=98.99  E-value=1.1e-10  Score=88.37  Aligned_cols=44  Identities=27%  Similarity=0.496  Sum_probs=36.9

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ..+||+.|+|||++. ..++.++|+|||||++|+|++|+.||...
T Consensus       178 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~  222 (311)
T 3ork_A          178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD  222 (311)
T ss_dssp             ----CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence            457999999999876 56999999999999999999999999764

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=98.99  E-value=1.6e-10  Score=88.96  Aligned_cols=46  Identities=33%  Similarity=0.595  Sum_probs=39.9

Q ss_pred             eccCCCcccccccc----cccCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMY----EEHYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus        11 ~~~gt~~y~ape~~----~~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      ..+||+.|+|||++    .+.++.++|+|||||++++|++|+.||.....
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~  258 (348)
T 1u5q_A          209 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA  258 (348)
T ss_dssp             CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence            46899999999976    25689999999999999999999999976433

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=98.99  E-value=1.6e-11  Score=90.80  Aligned_cols=45  Identities=24%  Similarity=0.494  Sum_probs=37.3

Q ss_pred             eccCCCcccccccccc-cC---CCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYEE-HY---DESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        11 ~~~gt~~y~ape~~~~-~~---~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ...||+.|+|||.+.+ ..   +.++|+||||+++++|++|+.||....
T Consensus       167 ~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~  215 (271)
T 3kmu_A          167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS  215 (271)
T ss_dssp             TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC
T ss_pred             CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC
Confidence            4578999999998763 23   348999999999999999999997643

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.99  E-value=1.1e-10  Score=87.53  Aligned_cols=45  Identities=9%  Similarity=0.132  Sum_probs=40.3

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ....||+.|+|||.+. ..++.++|+|||||++++|++|+.||...
T Consensus       173 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  218 (296)
T 3uzp_A          173 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL  218 (296)
T ss_dssp             CCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             cccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCc
Confidence            4568999999999877 56999999999999999999999999764

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.99  E-value=1.2e-10  Score=90.84  Aligned_cols=46  Identities=15%  Similarity=0.331  Sum_probs=40.4

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++|+|++|+.||....
T Consensus       251 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~  297 (397)
T 1wak_A          251 TEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHS  297 (397)
T ss_dssp             CSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred             ccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCc
Confidence            3457899999999876 569999999999999999999999997644

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=98.99  E-value=3.2e-10  Score=86.21  Aligned_cols=55  Identities=20%  Similarity=0.386  Sum_probs=44.2

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ....||+.|+|||++. ..++.++|+||||+++++|++|..||... +.......+.
T Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-~~~~~~~~i~  231 (321)
T 2a2a_A          176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-TKQETLANIT  231 (321)
T ss_dssp             CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHH
T ss_pred             cccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHH
Confidence            4567999999999876 56999999999999999999999999763 3334444443

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.99  E-value=2.7e-10  Score=87.73  Aligned_cols=56  Identities=25%  Similarity=0.376  Sum_probs=43.7

Q ss_pred             eeeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360            9 NIRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      .....||+.|+|||++.  ..++.++|+|||||++++|++|+.||... +....+..+.
T Consensus       188 ~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~-~~~~~~~~~~  245 (360)
T 3e3p_A          188 NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD-NSAGQLHEIV  245 (360)
T ss_dssp             CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHH
T ss_pred             cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCC-ChHHHHHHHH
Confidence            34568899999999775  34899999999999999999999999874 3333333333

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=98.99  E-value=2e-10  Score=86.02  Aligned_cols=46  Identities=17%  Similarity=0.311  Sum_probs=37.7

Q ss_pred             eeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ....||+.|+|||++.  ..++.++|+|||||++++|++|+.||....
T Consensus       158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  205 (288)
T 1ob3_A          158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS  205 (288)
T ss_dssp             ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            3458899999999875  358999999999999999999999997643

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=98.99  E-value=2.3e-10  Score=85.55  Aligned_cols=46  Identities=22%  Similarity=0.418  Sum_probs=39.5

Q ss_pred             eeeccCCCcccccccccccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      .....||+.|+|||++.+.++.++|+||||+++++|++|+.||...
T Consensus       183 ~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~  228 (285)
T 3is5_A          183 STNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGT  228 (285)
T ss_dssp             ----CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCC
Confidence            3456899999999998888999999999999999999999999763

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.98  E-value=1.3e-10  Score=89.30  Aligned_cols=45  Identities=22%  Similarity=0.326  Sum_probs=39.8

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ....||+.|+|||++. ..++.++|+|||||++|+|++|+.||...
T Consensus       218 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~  263 (345)
T 2v62_A          218 KGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQN  263 (345)
T ss_dssp             GCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGG
T ss_pred             cccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence            3558999999999887 46999999999999999999999999653

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=98.98  E-value=3e-10  Score=85.07  Aligned_cols=56  Identities=32%  Similarity=0.488  Sum_probs=42.6

Q ss_pred             eeccCCCccccccccc----ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE----EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~----~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ....||+.|+|||++.    +.++.++|+||||+++++|++|+.||............+.
T Consensus       180 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~  239 (289)
T 3og7_A          180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG  239 (289)
T ss_dssp             ----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHH
T ss_pred             cccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhc
Confidence            3467999999999774    3588899999999999999999999987655554444433

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.98  E-value=2.9e-10  Score=88.16  Aligned_cols=47  Identities=26%  Similarity=0.301  Sum_probs=40.8

Q ss_pred             eeeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      .+..+||+.|+|||++.  ..++.++|+||+||++++|++|+.||....
T Consensus       182 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  230 (367)
T 1cm8_A          182 MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD  230 (367)
T ss_dssp             CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            34568999999999775  469999999999999999999999997643

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=98.98  E-value=2.8e-10  Score=86.19  Aligned_cols=48  Identities=23%  Similarity=0.335  Sum_probs=40.7

Q ss_pred             eeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCCh
Q psy360           10 IRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIGP   57 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~   57 (199)
                      ...+||+.|+|||++.  ..++.++|+|||||++++|++|+.||......
T Consensus       177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  226 (311)
T 3niz_A          177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD  226 (311)
T ss_dssp             -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT
T ss_pred             cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH
Confidence            3558899999999775  45899999999999999999999999875443

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=98.98  E-value=1.9e-10  Score=89.75  Aligned_cols=46  Identities=20%  Similarity=0.550  Sum_probs=40.1

Q ss_pred             ccCCCcccccccccc---cCCCcCcchhHHHHHHHHHhCCCCCCCCCCh
Q psy360           12 TQRTPEFMAPEMYEE---HYDESVDVYAFGMCMLEMSTSEYPYMECIGP   57 (199)
Q Consensus        12 ~~gt~~y~ape~~~~---~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~   57 (199)
                      .+||+.|+|||++.+   .++.++|+|||||++++|++|+.||......
T Consensus       195 ~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~  243 (389)
T 3gni_B          195 SVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT  243 (389)
T ss_dssp             CTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCST
T ss_pred             ccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence            488999999998764   5899999999999999999999999775444

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=98.98  E-value=3e-10  Score=88.03  Aligned_cols=57  Identities=19%  Similarity=0.430  Sum_probs=43.8

Q ss_pred             eeeccCCCccccccccc-------ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            9 NIRTQRTPEFMAPEMYE-------EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-------~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ....+||+.|+|||++.       ..++.++|+|||||++|+|++|+.||... +....+..+..
T Consensus       256 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~-~~~~~~~~i~~  319 (365)
T 2y7j_A          256 LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR-RQILMLRMIME  319 (365)
T ss_dssp             BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH
T ss_pred             cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC-CHHHHHHHHHh
Confidence            34568999999999774       24888999999999999999999999763 33333344433

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.98  E-value=3.5e-10  Score=86.24  Aligned_cols=55  Identities=20%  Similarity=0.440  Sum_probs=42.5

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...+||+.|+|||++. ..++.++|+||||+++++|++|+.||... +.......+.
T Consensus       191 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~  246 (327)
T 3lm5_A          191 REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGE-DNQETYLNIS  246 (327)
T ss_dssp             ---CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHH
T ss_pred             ccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CchHHHHHHH
Confidence            3468999999999876 67999999999999999999999999764 3333333333

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=98.98  E-value=4.1e-10  Score=84.89  Aligned_cols=56  Identities=21%  Similarity=0.456  Sum_probs=44.7

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      ..+||+.|+|||++. ..++.++|+||||+++++|++|..||... ........+...
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-~~~~~~~~i~~~  222 (304)
T 2jam_A          166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE-TESKLFEKIKEG  222 (304)
T ss_dssp             HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS-CHHHHHHHHHHC
T ss_pred             cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHcC
Confidence            457999999999886 56999999999999999999999999763 344444444443

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.97  E-value=1.3e-10  Score=88.65  Aligned_cols=45  Identities=27%  Similarity=0.527  Sum_probs=25.6

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|+.||...
T Consensus       167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  212 (325)
T 3kn6_A          167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH  212 (325)
T ss_dssp             -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred             cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence            4568899999999887 56999999999999999999999999753

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=98.97  E-value=3.9e-10  Score=86.73  Aligned_cols=45  Identities=22%  Similarity=0.243  Sum_probs=39.5

Q ss_pred             eeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...+||+.|+|||++.  ..++.++|+|||||++++|++|+.||...
T Consensus       186 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  232 (351)
T 3mi9_A          186 TNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN  232 (351)
T ss_dssp             CSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCC
Confidence            4568899999999775  35899999999999999999999999764

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.97  E-value=1.5e-10  Score=86.71  Aligned_cols=44  Identities=9%  Similarity=0.150  Sum_probs=39.8

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...||+.|+|||.+. ..++.++|+|||||++++|++|+.||...
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  218 (296)
T 4hgt_A          174 NLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL  218 (296)
T ss_dssp             CCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             ccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCccc
Confidence            568999999999876 56999999999999999999999999764

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.97  E-value=1.8e-10  Score=88.36  Aligned_cols=46  Identities=15%  Similarity=0.223  Sum_probs=40.6

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ...+||+.|+|||++. ..++.++|+|||||++++|++|+.||....
T Consensus       197 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  243 (355)
T 2eu9_A          197 TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE  243 (355)
T ss_dssp             CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence            3468999999999876 579999999999999999999999997643

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=98.96  E-value=1.2e-10  Score=88.57  Aligned_cols=44  Identities=25%  Similarity=0.453  Sum_probs=39.4

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYM   52 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~   52 (199)
                      .....||+.|+|||++. +.++.++|+|||||++++|++|+.||.
T Consensus       192 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  236 (326)
T 3uim_A          192 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD  236 (326)
T ss_dssp             ECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred             cccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence            44567999999999876 679999999999999999999999995

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=98.96  E-value=3.6e-10  Score=90.54  Aligned_cols=46  Identities=17%  Similarity=0.379  Sum_probs=39.8

Q ss_pred             eeeccCCCccccccccccc--CCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYEEH--YDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~~~--~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ....+||+.|+|||++.+.  .+.++|+|||||++++|++|+.||...
T Consensus       172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~  219 (476)
T 2y94_A          172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD  219 (476)
T ss_dssp             BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC
Confidence            3456899999999988743  478999999999999999999999764

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=98.96  E-value=4.6e-10  Score=84.83  Aligned_cols=46  Identities=33%  Similarity=0.686  Sum_probs=38.7

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      ...||+.|+|||++. ..++.++|+||||+++++|++|+.||.....
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~  208 (307)
T 2eva_A          162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG  208 (307)
T ss_dssp             ---CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS
T ss_pred             cCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc
Confidence            457999999999887 5699999999999999999999999976443

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.96  E-value=1.6e-10  Score=90.63  Aligned_cols=45  Identities=29%  Similarity=0.352  Sum_probs=37.2

Q ss_pred             eeccCCCcccccccccc--cCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYEE--HYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~--~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...+||+.|+|||++.+  .++.++|+|||||++++|++|+.||...
T Consensus       193 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  239 (405)
T 3rgf_A          193 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  239 (405)
T ss_dssp             ----CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred             CCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence            35689999999997763  5999999999999999999999999754

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.96  E-value=3.9e-10  Score=85.32  Aligned_cols=55  Identities=18%  Similarity=0.396  Sum_probs=41.6

Q ss_pred             eccCCCcccccccccc------------cCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYEE------------HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~~------------~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ..+||+.|+|||++.+            .++.++|+||||+++++|++|+.||............+.
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  253 (313)
T 3cek_A          187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII  253 (313)
T ss_dssp             ---CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH
T ss_pred             CCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH
Confidence            4579999999998753            588899999999999999999999976544433333333

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=98.95  E-value=1.7e-10  Score=86.95  Aligned_cols=46  Identities=30%  Similarity=0.426  Sum_probs=41.2

Q ss_pred             eeccCCCcccccccccccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ....||+.|+|||.+.+.++.++|+||||+++++|++|..||....
T Consensus       193 ~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  238 (307)
T 2nru_A          193 SRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR  238 (307)
T ss_dssp             SSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTB
T ss_pred             cccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCc
Confidence            3468999999999988889999999999999999999999997643

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=98.95  E-value=1.7e-10  Score=87.70  Aligned_cols=46  Identities=22%  Similarity=0.476  Sum_probs=40.2

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ....||+.|+|||++. +.++.++|+||||+++++|++|+.||....
T Consensus       199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~  245 (321)
T 2qkw_B          199 TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL  245 (321)
T ss_dssp             CCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSS
T ss_pred             cccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccC
Confidence            3456899999999875 679999999999999999999999997643

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=98.94  E-value=9.2e-11  Score=89.30  Aligned_cols=44  Identities=25%  Similarity=0.338  Sum_probs=38.1

Q ss_pred             eccCCCcccccccccc------cCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYEE------HYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~~------~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ..+||+.|+|||++.+      .++.++|+|||||++|+|++|+.||...
T Consensus       192 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~  241 (322)
T 3soc_A          192 GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP  241 (322)
T ss_dssp             TCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSC
T ss_pred             cCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence            4689999999998764      4667899999999999999999999754

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.94  E-value=2.6e-10  Score=86.89  Aligned_cols=45  Identities=18%  Similarity=0.234  Sum_probs=40.1

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ..+||+.|+|||++. ..++.++|+|||||++++|++|..||....
T Consensus       193 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  238 (339)
T 1z57_A          193 TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD  238 (339)
T ss_dssp             SSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred             cccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence            458999999999876 569999999999999999999999997643

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=98.94  E-value=2.9e-10  Score=87.58  Aligned_cols=52  Identities=23%  Similarity=0.347  Sum_probs=41.9

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHH
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQI   60 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~   60 (199)
                      .....||+.|+|||++. ..++.++|+|||||++++|++ |..||.........
T Consensus       252 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~  305 (359)
T 3vhe_A          252 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF  305 (359)
T ss_dssp             C--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH
T ss_pred             ccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHH
Confidence            33567889999999876 679999999999999999998 99999775444433

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.94  E-value=2e-10  Score=88.92  Aligned_cols=45  Identities=16%  Similarity=0.349  Sum_probs=38.2

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ....||+.|+|||++. ..++.++|+|||||++++|++|+.||...
T Consensus       193 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  238 (373)
T 1q8y_A          193 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD  238 (373)
T ss_dssp             CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence            3458999999999876 56999999999999999999999999754

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.93  E-value=2.9e-10  Score=87.77  Aligned_cols=46  Identities=28%  Similarity=0.429  Sum_probs=38.5

Q ss_pred             eeeccCCCcccccccccc---cCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYEE---HYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~~---~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ....+||+.|+|||++.+   .++.++|+|||||++|+|++|+.||...
T Consensus       217 ~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~  265 (355)
T 1vzo_A          217 AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD  265 (355)
T ss_dssp             GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred             ccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccC
Confidence            345689999999998763   3789999999999999999999999753

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.93  E-value=4.6e-10  Score=85.50  Aligned_cols=54  Identities=15%  Similarity=0.258  Sum_probs=40.1

Q ss_pred             eccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ..+||+.|+|||++.  ..++.++|+|||||++++|++|+.||... +.......+.
T Consensus       159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~-~~~~~~~~i~  214 (324)
T 3mtl_A          159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS-TVEEQLHFIF  214 (324)
T ss_dssp             ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHH
T ss_pred             cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHH
Confidence            457899999999775  35899999999999999999999999764 3333333333

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.93  E-value=3e-10  Score=87.47  Aligned_cols=45  Identities=20%  Similarity=0.436  Sum_probs=40.3

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ...||+.|+|||++. ..++.++|+|||||++++|++|+.||....
T Consensus       227 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  272 (352)
T 2jii_A          227 PHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL  272 (352)
T ss_dssp             TTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred             cccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence            458999999999887 479999999999999999999999998654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=98.93  E-value=7.4e-10  Score=82.68  Aligned_cols=49  Identities=31%  Similarity=0.404  Sum_probs=41.2

Q ss_pred             eeeccCCCccccccccc---ccCCCcCcchhHHHHHHHHHhCCCCCCCCCCh
Q psy360            9 NIRTQRTPEFMAPEMYE---EHYDESVDVYAFGMCMLEMSTSEYPYMECIGP   57 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~---~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~   57 (199)
                      .....||+.|+|||++.   ..++.++|+|||||++++|++|+.||......
T Consensus       183 ~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~  234 (287)
T 4f0f_A          183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG  234 (287)
T ss_dssp             EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC
T ss_pred             ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc
Confidence            34568999999999873   35889999999999999999999999765443

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=98.93  E-value=6.4e-10  Score=86.29  Aligned_cols=46  Identities=28%  Similarity=0.355  Sum_probs=39.9

Q ss_pred             eeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ...+||+.|+|||++.  ..++.++|+|||||++++|++|+.||....
T Consensus       199 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  246 (371)
T 4exu_A          199 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD  246 (371)
T ss_dssp             -CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             CCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            4568899999999775  469999999999999999999999997643

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=98.93  E-value=5.1e-10  Score=85.42  Aligned_cols=47  Identities=21%  Similarity=0.224  Sum_probs=37.2

Q ss_pred             eeccCCCcccccccccc--cCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYEE--HYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~--~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      ...+||+.|+|||++.+  .++.++|+|||||++++|++|+.||.....
T Consensus       195 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  243 (329)
T 3gbz_A          195 THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE  243 (329)
T ss_dssp             -----CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             CCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH
Confidence            34578999999998763  489999999999999999999999976433

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=98.93  E-value=6.9e-10  Score=82.62  Aligned_cols=55  Identities=20%  Similarity=0.384  Sum_probs=42.4

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ....||+.|+|||++. +.++.++|+||||+++++|++|..||... +....+..+.
T Consensus       169 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-~~~~~~~~~~  224 (283)
T 3bhy_A          169 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE-TKQETLTNIS  224 (283)
T ss_dssp             ---CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHH
T ss_pred             cccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc-chHHHHHHhH
Confidence            3457999999999876 67999999999999999999999999763 3334444333

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=98.93  E-value=4.7e-10  Score=87.37  Aligned_cols=49  Identities=16%  Similarity=0.242  Sum_probs=41.2

Q ss_pred             eeeccCCCcccccccccc--cCCCcCcchhHHHHHHHHHhCCCCCCCCCCh
Q psy360            9 NIRTQRTPEFMAPEMYEE--HYDESVDVYAFGMCMLEMSTSEYPYMECIGP   57 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~~--~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~   57 (199)
                      .....||+.|+|||++.+  .++.++|+|||||++++|++|+.||......
T Consensus       198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  248 (383)
T 3eb0_A          198 SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI  248 (383)
T ss_dssp             CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChH
Confidence            345688999999997753  4899999999999999999999999874433

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=98.93  E-value=4.7e-10  Score=86.77  Aligned_cols=47  Identities=21%  Similarity=0.277  Sum_probs=40.1

Q ss_pred             eeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      ...+||+.|+|||++.  ..++.++|+|||||++++|++|+.||.....
T Consensus       189 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  237 (364)
T 3qyz_A          189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY  237 (364)
T ss_dssp             CCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSG
T ss_pred             cccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCCh
Confidence            3458999999999764  3489999999999999999999999976443

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.92  E-value=4e-10  Score=85.28  Aligned_cols=45  Identities=24%  Similarity=0.507  Sum_probs=38.2

Q ss_pred             eccCCCccccccccc------ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE------EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        11 ~~~gt~~y~ape~~~------~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ..+||+.|+|||++.      +.++.++|+|||||++++|++|+.||....
T Consensus       180 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  230 (316)
T 2ac3_A          180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC  230 (316)
T ss_dssp             --CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred             cccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccc
Confidence            456999999999875      348899999999999999999999997643

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.92  E-value=2.3e-10  Score=88.73  Aligned_cols=44  Identities=7%  Similarity=0.260  Sum_probs=38.8

Q ss_pred             eccCCCcccccccccc---cCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYEE---HYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~~---~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...||+.|+|||++.+   .++.++|+|||||++|+|++|+.||...
T Consensus       250 ~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~  296 (371)
T 3q60_A          250 ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLV  296 (371)
T ss_dssp             GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred             CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCc
Confidence            5577799999998763   5999999999999999999999999764

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=98.92  E-value=6.2e-10  Score=84.87  Aligned_cols=44  Identities=25%  Similarity=0.394  Sum_probs=37.8

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~   54 (199)
                      ...||+.|+|||++. +.++.++|+|||||++|+|++ |+.||...
T Consensus       178 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~  223 (327)
T 3poz_A          178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI  223 (327)
T ss_dssp             --CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCC
Confidence            456788999999876 679999999999999999999 99999763

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.92  E-value=8.9e-10  Score=82.16  Aligned_cols=55  Identities=24%  Similarity=0.388  Sum_probs=43.8

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ....||+.|+|||++. ..++.++|+||||+++++|++|..||... +.......+.
T Consensus       170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-~~~~~~~~~~  225 (284)
T 2vgo_A          170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP-SHTETHRRIV  225 (284)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHH
T ss_pred             ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCC-CHhHHHHHHh
Confidence            3468999999999876 56899999999999999999999999763 3333334443

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=98.92  E-value=3.5e-10  Score=85.45  Aligned_cols=44  Identities=34%  Similarity=0.585  Sum_probs=39.5

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ..+||+.|+|||++. ..++.++|+||||+++++|++|..|+...
T Consensus       181 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~  225 (310)
T 3s95_A          181 TVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY  225 (310)
T ss_dssp             CCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTT
T ss_pred             ccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcch
Confidence            568999999999887 56999999999999999999999988654

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=98.91  E-value=8e-10  Score=82.51  Aligned_cols=56  Identities=29%  Similarity=0.515  Sum_probs=42.2

Q ss_pred             eccCCCcccccccc----c-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMY----E-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~----~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...||+.|+|||.+    . ..++.++|+||||+++++|++|+.||...............
T Consensus       168 ~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  228 (290)
T 3fme_A          168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE  228 (290)
T ss_dssp             --CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH
T ss_pred             ccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc
Confidence            34799999999985    3 45889999999999999999999999865555444444433

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=98.91  E-value=6.5e-10  Score=85.40  Aligned_cols=57  Identities=18%  Similarity=0.163  Sum_probs=44.1

Q ss_pred             eeeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            9 NIRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ....+||+.|+|||++.  ..++.++|+|||||++++|++|..||... +....+..+..
T Consensus       169 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~-~~~~~~~~i~~  227 (346)
T 1ua2_A          169 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD-SDLDQLTRIFE  227 (346)
T ss_dssp             CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH
T ss_pred             CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC-CHHHHHHHHHH
Confidence            34568999999999875  34899999999999999999999888764 33344444443

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.91  E-value=3.2e-10  Score=86.87  Aligned_cols=45  Identities=22%  Similarity=0.444  Sum_probs=38.8

Q ss_pred             eeeccCCCccccccccc-ccC-CCcCcchhHHHHHHHHHhCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE-EHY-DESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~-~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ....+||+.|+|||++. ..+ +.++|+|||||++|+|++|+.||..
T Consensus       186 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  232 (335)
T 3dls_A          186 FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE  232 (335)
T ss_dssp             BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred             eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence            34568999999999876 344 8899999999999999999999964

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.91  E-value=8.4e-10  Score=83.83  Aligned_cols=55  Identities=20%  Similarity=0.257  Sum_probs=43.9

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ....||+.|+|||++. ..++.++|+|||||++++|++|+.||.... ....+..++
T Consensus       177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~i~  232 (326)
T 1blx_A          177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS-DVDQLGKIL  232 (326)
T ss_dssp             CCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHH
T ss_pred             cccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHH
Confidence            3568899999999876 569999999999999999999999997643 333333443

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=98.91  E-value=6.5e-10  Score=82.42  Aligned_cols=56  Identities=25%  Similarity=0.395  Sum_probs=43.6

Q ss_pred             eeccCCCcccccccccc-c-CCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYEE-H-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~-~-~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ....||+.|+|||.+.+ . .+.++|+||||+++++|++|+.||.........+..+.
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  222 (276)
T 2yex_A          165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK  222 (276)
T ss_dssp             CCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHH
T ss_pred             cCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhh
Confidence            35679999999998863 3 47899999999999999999999987554433444333

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=98.91  E-value=1.1e-09  Score=81.36  Aligned_cols=56  Identities=25%  Similarity=0.441  Sum_probs=42.9

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ....||+.|+|||.+. ..++.++|+||||+++++|++|..||.. .+.......+..
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~-~~~~~~~~~~~~  221 (279)
T 3fdn_A          165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISR  221 (279)
T ss_dssp             ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC-SSHHHHHHHHHH
T ss_pred             cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC-CcHHHHHHHHHh
Confidence            3568999999999876 5688999999999999999999999976 344444444433

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.90  E-value=8.6e-10  Score=83.95  Aligned_cols=51  Identities=20%  Similarity=0.318  Sum_probs=42.4

Q ss_pred             eeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHH
Q psy360           10 IRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI   60 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~   60 (199)
                      ....||+.|+|||++.  ..++.++|+|||||++++|++|+.||....+....
T Consensus       188 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~  240 (330)
T 3nsz_A          188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ  240 (330)
T ss_dssp             CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHH
T ss_pred             ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHH
Confidence            3457899999999775  45999999999999999999999999765554433

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=98.90  E-value=5.9e-10  Score=85.08  Aligned_cols=48  Identities=27%  Similarity=0.279  Sum_probs=40.2

Q ss_pred             eeccCCCcccccccccc--cCCCcCcchhHHHHHHHHHhCCCCCCCCCCh
Q psy360           10 IRTQRTPEFMAPEMYEE--HYDESVDVYAFGMCMLEMSTSEYPYMECIGP   57 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~--~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~   57 (199)
                      ....||+.|+|||++.+  .++.++|+|||||++++|++|+.||......
T Consensus       182 ~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  231 (331)
T 4aaa_A          182 DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI  231 (331)
T ss_dssp             --CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             CCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH
Confidence            35679999999998764  5899999999999999999999999775443

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=98.90  E-value=6.8e-10  Score=86.08  Aligned_cols=54  Identities=19%  Similarity=0.393  Sum_probs=43.0

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...||+.|+|||++. +.++.++|+|||||++++|++ |..||.. .+.......+.
T Consensus       245 ~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~-~~~~~~~~~i~  300 (367)
T 3l9p_A          245 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVT  300 (367)
T ss_dssp             GGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT-CCHHHHHHHHH
T ss_pred             CcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHH
Confidence            457899999999875 679999999999999999998 9999976 34444444433

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.90  E-value=6.1e-10  Score=88.25  Aligned_cols=44  Identities=20%  Similarity=0.462  Sum_probs=35.7

Q ss_pred             eccCCCccccccccc--------ccCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE--------EHYDESVDVYAFGMCMLEMST-SEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~--------~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~   54 (199)
                      ..+||+.|+|||++.        +.++.++|+|||||++++|++ |+.||...
T Consensus       191 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~  243 (434)
T 2rio_A          191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK  243 (434)
T ss_dssp             ----CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred             CCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence            468999999999774        358899999999999999999 99999654

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.90  E-value=7.5e-10  Score=83.76  Aligned_cols=56  Identities=30%  Similarity=0.701  Sum_probs=41.3

Q ss_pred             eccCCCccccccccc------ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYE------EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~------~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...||+.|+|||++.      ..++.++|+||||+++++|++|+.||.........+..+..
T Consensus       183 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  244 (318)
T 2dyl_A          183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ  244 (318)
T ss_dssp             ----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHH
T ss_pred             ccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhc
Confidence            457999999999873      35889999999999999999999999875555455444443

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.90  E-value=2.5e-10  Score=88.74  Aligned_cols=44  Identities=18%  Similarity=0.327  Sum_probs=37.8

Q ss_pred             eeeccCCCccccccccc-c-----------cCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE-E-----------HYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~-----------~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ....+| +.|+|||++. .           .++.++|+|||||++|+|++|+.||..
T Consensus       260 ~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~  315 (377)
T 3byv_A          260 VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITK  315 (377)
T ss_dssp             EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             ccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcc
Confidence            446688 9999999876 4           699999999999999999999999965

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.89  E-value=4.4e-10  Score=85.57  Aligned_cols=46  Identities=24%  Similarity=0.432  Sum_probs=37.7

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMEC   54 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~   54 (199)
                      .....||+.|+|||.+. +.++.++|+|||||++|+|++ |+.||...
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~  221 (325)
T 3kex_A          174 YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL  221 (325)
T ss_dssp             -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred             ccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCcccc
Confidence            34567888999999887 679999999999999999999 99999764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.89  E-value=3.9e-10  Score=89.86  Aligned_cols=39  Identities=28%  Similarity=0.414  Sum_probs=30.8

Q ss_pred             eeeccCCCcccccccc-c-ccCCCcCcchhHHHHHHHHHhC
Q psy360            9 NIRTQRTPEFMAPEMY-E-EHYDESVDVYAFGMCMLEMSTS   47 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~-~-~~~~~~~d~ws~gv~l~~l~~g   47 (199)
                      .+..+||+.|+|||++ . ..++.++|+|||||+++||++|
T Consensus       240 ~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          240 LTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             -----CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             ccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence            4567899999999965 4 5699999999999999999983

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=98.89  E-value=5.8e-10  Score=86.57  Aligned_cols=52  Identities=29%  Similarity=0.470  Sum_probs=41.5

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKK   63 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~   63 (199)
                      ...||+.|+|||++. ..++.++|+|||||++|||++ |+.||... +..+....
T Consensus       264 ~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~-~~~~~~~~  317 (370)
T 2psq_A          264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKL  317 (370)
T ss_dssp             TTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CGGGHHHH
T ss_pred             CCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHH
Confidence            346678999999776 569999999999999999999 99999763 44444433

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.89  E-value=9.7e-11  Score=88.76  Aligned_cols=53  Identities=21%  Similarity=0.374  Sum_probs=41.1

Q ss_pred             eccCCCcccccccccc----------cCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHH
Q psy360           11 RTQRTPEFMAPEMYEE----------HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV   64 (199)
Q Consensus        11 ~~~gt~~y~ape~~~~----------~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i   64 (199)
                      ...||+.|+|||++.+          .++.++|+||||+++++|++|+.||... ........+
T Consensus       193 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~-~~~~~~~~~  255 (319)
T 2y4i_B          193 IQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ-PAEAIIWQM  255 (319)
T ss_dssp             CCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC-CHHHHHHHH
T ss_pred             cCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHh
Confidence            3468999999997752          3788999999999999999999999763 333333333

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.89  E-value=4.5e-10  Score=88.94  Aligned_cols=43  Identities=23%  Similarity=0.296  Sum_probs=34.3

Q ss_pred             eeeccCCCcccccccc-c-ccCCCcCcchhHHHHHHHHHhCCCCC
Q psy360            9 NIRTQRTPEFMAPEMY-E-EHYDESVDVYAFGMCMLEMSTSEYPY   51 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~-~-~~~~~~~d~ws~gv~l~~l~~g~~p~   51 (199)
                      .+..+||+.|+|||++ . ..++.++|+|||||+++||++|..|+
T Consensus       208 ~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          208 LTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             ---CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             ccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence            4677999999999975 4 56999999999999999999854443

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=98.88  E-value=4.8e-10  Score=83.82  Aligned_cols=55  Identities=25%  Similarity=0.443  Sum_probs=44.4

Q ss_pred             eccCCCcccccccccccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...||+.|+|||.+.+.++.++|+||||+++++|++|..||... +.......+..
T Consensus       182 ~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~~  236 (287)
T 2wei_A          182 DRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGK-NEYDILKRVET  236 (287)
T ss_dssp             CHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH
T ss_pred             cccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCC-CHHHHHHHHHc
Confidence            34678899999998888999999999999999999999999763 44444444443

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.88  E-value=8.8e-10  Score=87.30  Aligned_cols=44  Identities=23%  Similarity=0.393  Sum_probs=36.7

Q ss_pred             eeccCCCccccccccc----ccCCCcCcchhHHHHHHHHHh-CCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE----EHYDESVDVYAFGMCMLEMST-SEYPYME   53 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~----~~~~~~~d~ws~gv~l~~l~~-g~~p~~~   53 (199)
                      ...+||+.|+|||++.    ..++.++|+|||||++++|++ |..||..
T Consensus       184 ~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~  232 (432)
T 3p23_A          184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK  232 (432)
T ss_dssp             --CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBS
T ss_pred             cccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcch
Confidence            3568999999999875    347789999999999999999 8888854

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=98.88  E-value=7.6e-10  Score=84.08  Aligned_cols=47  Identities=23%  Similarity=0.454  Sum_probs=39.9

Q ss_pred             eccCCCccccccccc----ccCCCcCcchhHHHHHHHHHhCCCCCCCCCCh
Q psy360           11 RTQRTPEFMAPEMYE----EHYDESVDVYAFGMCMLEMSTSEYPYMECIGP   57 (199)
Q Consensus        11 ~~~gt~~y~ape~~~----~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~   57 (199)
                      ...||+.|+|||++.    ..++.++|+|||||++++|++|..||......
T Consensus       175 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  225 (322)
T 2ycf_A          175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ  225 (322)
T ss_dssp             HHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS
T ss_pred             cccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH
Confidence            457999999999762    45899999999999999999999999765443

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.87  E-value=1.6e-10  Score=88.24  Aligned_cols=44  Identities=27%  Similarity=0.344  Sum_probs=37.5

Q ss_pred             eccCCCcccccccccc--------cCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYEE--------HYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~~--------~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ..+||+.|+|||++.+        .++.++|+|||||++|+|++|..|+...
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~  238 (336)
T 3g2f_A          187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG  238 (336)
T ss_dssp             CTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTT
T ss_pred             cCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCc
Confidence            5579999999998764        3667999999999999999998887654

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=98.87  E-value=8.1e-10  Score=82.10  Aligned_cols=55  Identities=22%  Similarity=0.444  Sum_probs=43.0

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...||+.|+|||.+. ..++.++|+||||+++++|++|+.||... +.......+..
T Consensus       175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-~~~~~~~~i~~  230 (279)
T 2w5a_A          175 TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF-SQKELAGKIRE  230 (279)
T ss_dssp             HHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH
T ss_pred             ccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc-CHHHHHHHHhh
Confidence            357899999999876 56899999999999999999999999763 34444444443

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=98.87  E-value=2.7e-10  Score=85.58  Aligned_cols=44  Identities=30%  Similarity=0.619  Sum_probs=36.9

Q ss_pred             eccCCCcccccccccc-------cCCCcCcchhHHHHHHHHHhC----------CCCCCCC
Q psy360           11 RTQRTPEFMAPEMYEE-------HYDESVDVYAFGMCMLEMSTS----------EYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~~-------~~~~~~d~ws~gv~l~~l~~g----------~~p~~~~   54 (199)
                      ..+||+.|+|||++.+       .++.++|+|||||++|+|++|          ..||...
T Consensus       176 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~  236 (301)
T 3q4u_A          176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV  236 (301)
T ss_dssp             CCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred             ccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence            3489999999998763       345799999999999999999          7888654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=98.87  E-value=1.8e-09  Score=80.92  Aligned_cols=45  Identities=24%  Similarity=0.416  Sum_probs=39.6

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ....||+.|+|||.+. ..++.++|+||||+++++|++|+.||...
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~  218 (294)
T 2rku_A          173 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS  218 (294)
T ss_dssp             CCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             ccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            3457899999999876 56899999999999999999999999763

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=98.87  E-value=5.6e-10  Score=86.14  Aligned_cols=45  Identities=27%  Similarity=0.552  Sum_probs=38.7

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ....||+.|+|||++. ..++.++|+|||||++++|++|+.||...
T Consensus       188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  233 (360)
T 3eqc_A          188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP  233 (360)
T ss_dssp             ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred             cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            3568999999999877 56999999999999999999999999763

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.87  E-value=4.4e-10  Score=88.53  Aligned_cols=45  Identities=13%  Similarity=0.268  Sum_probs=38.4

Q ss_pred             eeeccCCCcccccccc----------c-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMY----------E-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~----------~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ....+| +.|+|||++          . ..++.++|+|||||++|+|++|+.||...
T Consensus       265 ~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~  320 (413)
T 3dzo_A          265 AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDD  320 (413)
T ss_dssp             ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTT
T ss_pred             cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence            445688 999999977          3 34888999999999999999999999753

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.86  E-value=5.9e-10  Score=89.46  Aligned_cols=45  Identities=9%  Similarity=0.124  Sum_probs=40.5

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ..+||+.|+|||++. ..++.++|||||||+||+|++|+.||....
T Consensus       172 ~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~  217 (483)
T 3sv0_A          172 NLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK  217 (483)
T ss_dssp             CCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             ccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence            568999999999876 569999999999999999999999997643

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=98.86  E-value=4.8e-10  Score=86.73  Aligned_cols=47  Identities=30%  Similarity=0.569  Sum_probs=32.7

Q ss_pred             eeccCCCccccccccc-ccCCCc-CcchhHHHHHHHHHhCCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDES-VDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~-~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      ...+||+.|+|||++. ..++.+ +|+|||||++|+|++|+.||.....
T Consensus       175 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  223 (361)
T 3uc3_A          175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE  223 (361)
T ss_dssp             ------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----
T ss_pred             CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc
Confidence            3568999999999875 455544 8999999999999999999976443

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=98.86  E-value=7.1e-10  Score=84.95  Aligned_cols=48  Identities=25%  Similarity=0.376  Sum_probs=40.6

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChh
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPA   58 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~   58 (199)
                      ...||+.|+|||.+. +.++.++|+|||||++++|++ |..||.......
T Consensus       233 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  282 (344)
T 1rjb_A          233 NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA  282 (344)
T ss_dssp             TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             CccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH
Confidence            456788999999876 679999999999999999998 999997754443

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=98.86  E-value=8.2e-10  Score=83.45  Aligned_cols=53  Identities=23%  Similarity=0.394  Sum_probs=42.8

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKK   63 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~   63 (199)
                      ...||+.|+|||++. +.++.++|+||||+++++|++ |..||............
T Consensus       209 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~  263 (316)
T 2xir_A          209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR  263 (316)
T ss_dssp             TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHH
T ss_pred             CCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHH
Confidence            456788999999876 679999999999999999998 99999775444444333

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=98.86  E-value=1.1e-09  Score=82.75  Aligned_cols=43  Identities=33%  Similarity=0.471  Sum_probs=34.0

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ...||+.|+|||.+. ..++.++|+||||+++++|++|+.||..
T Consensus       194 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  237 (309)
T 2h34_A          194 NTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQG  237 (309)
T ss_dssp             ---CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCS
T ss_pred             ccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCC
Confidence            457999999999876 5689999999999999999999999975

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.86  E-value=1.3e-09  Score=83.91  Aligned_cols=46  Identities=28%  Similarity=0.355  Sum_probs=38.5

Q ss_pred             eeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ....||+.|+|||++.  ..++.++|+|||||++++|++|+.||....
T Consensus       181 ~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  228 (353)
T 3coi_A          181 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD  228 (353)
T ss_dssp             ---CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC
T ss_pred             cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            3468899999999775  468999999999999999999999997643

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=98.86  E-value=1.7e-09  Score=82.66  Aligned_cols=55  Identities=22%  Similarity=0.378  Sum_probs=43.5

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ....||+.|+|||++. ..++.++|+||||+++++|++|+.||... .....+..+.
T Consensus       199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-~~~~~~~~~~  254 (335)
T 2owb_A          199 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKETYLRIK  254 (335)
T ss_dssp             CCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHH
T ss_pred             cccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC-CHHHHHHHHh
Confidence            3467999999999876 56899999999999999999999999763 3333333333

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.86  E-value=7.5e-10  Score=85.06  Aligned_cols=45  Identities=20%  Similarity=0.242  Sum_probs=39.5

Q ss_pred             eccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        11 ~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ..+||+.|+|||++.  ..++.++|+|||||++++|++|+.||....
T Consensus       181 ~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  227 (353)
T 2b9h_A          181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD  227 (353)
T ss_dssp             CCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             hccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            458999999999764  569999999999999999999999997643

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=98.86  E-value=6.8e-10  Score=83.84  Aligned_cols=47  Identities=21%  Similarity=0.263  Sum_probs=36.3

Q ss_pred             eeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      ...+||+.|+|||++.  ..++.++|+||||+++++|++|+.||.....
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  208 (311)
T 4agu_A          160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSD  208 (311)
T ss_dssp             ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH
Confidence            3568899999999775  4589999999999999999999999977443

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=98.86  E-value=8.7e-10  Score=81.91  Aligned_cols=44  Identities=18%  Similarity=0.347  Sum_probs=22.4

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...||+.|+|||.+. ..++.++|+||||+++++|++|+.||...
T Consensus       171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  215 (278)
T 3cok_A          171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD  215 (278)
T ss_dssp             ---------------------CTHHHHHHHHHHHHHHSSCSSCCC
T ss_pred             eccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCh
Confidence            467899999999876 56899999999999999999999999753

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=98.85  E-value=1e-09  Score=87.36  Aligned_cols=53  Identities=21%  Similarity=0.464  Sum_probs=42.1

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKV   64 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i   64 (199)
                      ...+|+.|+|||++. +.++.++|||||||+++||++ |+.||... +..+....+
T Consensus       344 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~-~~~~~~~~i  398 (454)
T 1qcf_A          344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM-SNPEVIRAL  398 (454)
T ss_dssp             SSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHHHHHH
T ss_pred             CCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC-CHHHHHHHH
Confidence            345678999999887 779999999999999999999 99999763 333443333

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=98.84  E-value=1e-09  Score=83.66  Aligned_cols=44  Identities=27%  Similarity=0.520  Sum_probs=36.9

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~   54 (199)
                      ...||+.|+|||++. +.++.++|+|||||++++|++ |..||...
T Consensus       213 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~  258 (325)
T 3kul_A          213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM  258 (325)
T ss_dssp             ---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred             CCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC
Confidence            345678899999887 679999999999999999999 99999763

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=98.84  E-value=1.4e-09  Score=82.25  Aligned_cols=45  Identities=29%  Similarity=0.567  Sum_probs=39.9

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ...||+.|+|||++. ..++.++|+||||+++++|++|+.||....
T Consensus       184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  229 (314)
T 3com_A          184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH  229 (314)
T ss_dssp             CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence            457899999999876 568999999999999999999999997643

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=98.84  E-value=1.2e-09  Score=82.02  Aligned_cols=47  Identities=34%  Similarity=0.593  Sum_probs=38.8

Q ss_pred             eccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCCh
Q psy360           11 RTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIGP   57 (199)
Q Consensus        11 ~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~   57 (199)
                      ...||+.|+|||++.  ..++.++|+||||+++++|++|+.||......
T Consensus       185 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  233 (303)
T 2vwi_A          185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM  233 (303)
T ss_dssp             ---CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG
T ss_pred             ccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh
Confidence            457999999999875  45899999999999999999999999775443

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=98.84  E-value=1.6e-09  Score=83.56  Aligned_cols=46  Identities=20%  Similarity=0.271  Sum_probs=36.8

Q ss_pred             eeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ....||+.|+|||++.  +.++.++|+|||||++++|++|+.||....
T Consensus       191 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  238 (362)
T 3pg1_A          191 THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST  238 (362)
T ss_dssp             -----CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC
Confidence            3568899999999775  469999999999999999999999997643

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=98.83  E-value=2.8e-10  Score=89.07  Aligned_cols=47  Identities=28%  Similarity=0.651  Sum_probs=39.7

Q ss_pred             eeccCCCccccccccc---------ccCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE---------EHYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~---------~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      ...+||+.|+|||++.         +.++.++|+|||||++|+|++|+.||.....
T Consensus       173 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~  228 (396)
T 4eut_A          173 VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG  228 (396)
T ss_dssp             SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTC
T ss_pred             ccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc
Confidence            3567999999999774         3578899999999999999999999975433

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=98.83  E-value=7.3e-10  Score=84.38  Aligned_cols=43  Identities=21%  Similarity=0.437  Sum_probs=24.7

Q ss_pred             eccCCCcccccccc---c-ccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360           11 RTQRTPEFMAPEMY---E-EHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus        11 ~~~gt~~y~ape~~---~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ..+||+.|+|||++   . ..++.++|+|||||++++|++|+.||..
T Consensus       209 ~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~  255 (337)
T 3ll6_A          209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED  255 (337)
T ss_dssp             ---------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             cccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence            45699999999987   3 4588999999999999999999999965

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=98.83  E-value=1.3e-09  Score=82.01  Aligned_cols=45  Identities=31%  Similarity=0.552  Sum_probs=39.8

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ....||+.|+|||++. ..++.++|+||||+++++|++|+.||...
T Consensus       177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  222 (303)
T 3a7i_A          177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL  222 (303)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc
Confidence            3457999999999876 56899999999999999999999999763

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=98.83  E-value=1.3e-09  Score=81.56  Aligned_cols=47  Identities=30%  Similarity=0.614  Sum_probs=40.0

Q ss_pred             eccCCCccccccccc-c--cCCCcCcchhHHHHHHHHHhCCCCCCCCCCh
Q psy360           11 RTQRTPEFMAPEMYE-E--HYDESVDVYAFGMCMLEMSTSEYPYMECIGP   57 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~--~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~   57 (199)
                      ...||+.|+|||++. +  .++.++|+||||+++++|++|+.||......
T Consensus       182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  231 (295)
T 2clq_A          182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP  231 (295)
T ss_dssp             CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH
T ss_pred             ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch
Confidence            457999999999875 3  3889999999999999999999999764443

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.83  E-value=1.9e-09  Score=82.20  Aligned_cols=44  Identities=25%  Similarity=0.394  Sum_probs=37.5

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~   54 (199)
                      ...||+.|+|||.+. ..++.++|+|||||++++|++ |..||...
T Consensus       178 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~  223 (327)
T 3lzb_A          178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI  223 (327)
T ss_dssp             --CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            345678999999876 679999999999999999999 99999763

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.82  E-value=3.2e-09  Score=79.61  Aligned_cols=56  Identities=23%  Similarity=0.471  Sum_probs=43.5

Q ss_pred             eeccCCCccccccccc-------ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYE-------EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-------~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ....||+.|+|||++.       ..++.++|+||||+++++|++|+.||... +.......+..
T Consensus       181 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~~  243 (298)
T 1phk_A          181 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR-KQMLMLRMIMS  243 (298)
T ss_dssp             CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH
T ss_pred             ccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc-cHHHHHHHHhc
Confidence            4567999999999763       34889999999999999999999999763 33344444444

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=98.82  E-value=1.1e-09  Score=83.42  Aligned_cols=44  Identities=32%  Similarity=0.666  Sum_probs=25.2

Q ss_pred             eccCCCcccccccc----c-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMY----E-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~----~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...||+.|+|||++    . ..++.++|+||||+++++|++|+.||...
T Consensus       184 ~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  232 (327)
T 3aln_A          184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKW  232 (327)
T ss_dssp             ----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC
T ss_pred             cCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence            34799999999987    2 45899999999999999999999999753

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=98.82  E-value=1.2e-09  Score=81.39  Aligned_cols=45  Identities=24%  Similarity=0.523  Sum_probs=39.0

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECI   55 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~   55 (199)
                      ...||+.|+|||.+. ..++.++|+||||+++++|++ |+.||....
T Consensus       173 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~  219 (281)
T 3cc6_A          173 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE  219 (281)
T ss_dssp             CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred             cCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCC
Confidence            446788999999886 679999999999999999998 999997643

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=98.82  E-value=1.4e-09  Score=82.02  Aligned_cols=48  Identities=23%  Similarity=0.360  Sum_probs=40.2

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChh
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPA   58 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~   58 (199)
                      ...||+.|+|||.+. ..++.++|+||||+++++|++ |+.||.......
T Consensus       206 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~  255 (313)
T 1t46_A          206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS  255 (313)
T ss_dssp             SSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH
T ss_pred             CCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh
Confidence            346688999999776 679999999999999999998 999997654443

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=98.82  E-value=2.1e-09  Score=80.09  Aligned_cols=44  Identities=27%  Similarity=0.597  Sum_probs=36.6

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~   54 (199)
                      ...||+.|+|||.+. ..++.++|+||||+++++|++ |..||...
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~  221 (281)
T 1mp8_A          176 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV  221 (281)
T ss_dssp             ---CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             cCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcC
Confidence            346678999999886 679999999999999999996 99999764

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.82  E-value=1.9e-09  Score=82.58  Aligned_cols=58  Identities=24%  Similarity=0.570  Sum_probs=45.6

Q ss_pred             eeccCCCcccccccccc--cCCC-cCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360           10 IRTQRTPEFMAPEMYEE--HYDE-SVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~--~~~~-~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      ....||+.|+|||.+.+  .++. ++|+||||+++++|++|+.||............+...
T Consensus       208 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~  268 (348)
T 2pml_X          208 KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTK  268 (348)
T ss_dssp             CSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSC
T ss_pred             cCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhcc
Confidence            35689999999998863  4555 9999999999999999999998765545555555443

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=98.82  E-value=1.5e-09  Score=82.93  Aligned_cols=54  Identities=22%  Similarity=0.386  Sum_probs=42.4

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...||+.|+|||++. +.++.++|+||||+++|+|++ |..||... +.......+.
T Consensus       235 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~-~~~~~~~~~~  290 (343)
T 1luf_A          235 NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM-AHEEVIYYVR  290 (343)
T ss_dssp             -CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-CHHHHHHHHH
T ss_pred             CCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC-ChHHHHHHHh
Confidence            457788999999876 679999999999999999999 99999763 3334433333

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.82  E-value=1.6e-09  Score=80.13  Aligned_cols=54  Identities=22%  Similarity=0.527  Sum_probs=42.5

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...||+.|+|||.+. ..++.++|+||||+++++|++ |+.||.. .+.......+.
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~-~~~~~~~~~~~  221 (269)
T 4hcu_A          166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN-RSNSEVVEDIS  221 (269)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT-CCHHHHHHHHH
T ss_pred             CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCC-CCHHHHHHHHh
Confidence            446677899999887 679999999999999999999 9999976 34444444433

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=98.82  E-value=1.4e-09  Score=80.38  Aligned_cols=44  Identities=32%  Similarity=0.559  Sum_probs=38.1

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~   54 (199)
                      ...||+.|+|||.+. ..++.++|+||||+++++|++ |+.||...
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~  209 (268)
T 3sxs_A          164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY  209 (268)
T ss_dssp             SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCcccc
Confidence            445677899999887 579999999999999999999 99999764

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=98.81  E-value=1.6e-09  Score=80.97  Aligned_cols=54  Identities=24%  Similarity=0.451  Sum_probs=41.1

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...||+.|+|||++. ..++.++|+||||+++++|++ |+.||... +.......+.
T Consensus       183 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-~~~~~~~~~~  238 (291)
T 1u46_A          183 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQILHKID  238 (291)
T ss_dssp             ---CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHH
T ss_pred             cCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC-CHHHHHHHHH
Confidence            456788999999886 568999999999999999999 99999763 3444444443

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=98.81  E-value=1.6e-09  Score=82.26  Aligned_cols=45  Identities=29%  Similarity=0.510  Sum_probs=36.3

Q ss_pred             eccCCCccccccccc------ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE------EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        11 ~~~gt~~y~ape~~~------~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ...||+.|+|||++.      ..++.++|+|||||++++|++|..||....
T Consensus       188 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  238 (326)
T 2x7f_A          188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH  238 (326)
T ss_dssp             ---CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             cccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence            457999999999774      358899999999999999999999997643

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=98.81  E-value=2.6e-09  Score=80.21  Aligned_cols=44  Identities=34%  Similarity=0.597  Sum_probs=36.8

Q ss_pred             eccCCCcccccccc------cccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMY------EEHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~------~~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...||+.|+|||++      ...++.++|+||||+++++|++|..||...
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  225 (302)
T 2j7t_A          176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL  225 (302)
T ss_dssp             ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC
Confidence            45799999999976      245889999999999999999999999764

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=98.80  E-value=1.7e-09  Score=82.42  Aligned_cols=48  Identities=23%  Similarity=0.385  Sum_probs=39.9

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChh
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPA   58 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~   58 (199)
                      ...||+.|+|||.+. ..++.++|+|||||++++|++ |..||.......
T Consensus       225 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  274 (333)
T 2i1m_A          225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS  274 (333)
T ss_dssp             SCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH
T ss_pred             CCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH
Confidence            345678999999776 679999999999999999998 999997654433

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.80  E-value=1e-09  Score=82.02  Aligned_cols=45  Identities=24%  Similarity=0.523  Sum_probs=39.0

Q ss_pred             ccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCC
Q psy360           12 TQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIG   56 (199)
Q Consensus        12 ~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~   56 (199)
                      ..||+.|+|||++. ..++.++|+||||+++++|++ |+.||.....
T Consensus       173 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~  219 (287)
T 1u59_A          173 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG  219 (287)
T ss_dssp             SCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT
T ss_pred             ccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH
Confidence            35688999999886 679999999999999999998 9999976443

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=98.80  E-value=1.7e-09  Score=89.27  Aligned_cols=44  Identities=25%  Similarity=0.543  Sum_probs=37.6

Q ss_pred             cCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCC
Q psy360           13 QRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIG   56 (199)
Q Consensus        13 ~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~   56 (199)
                      .+|+.|+|||++. +.++.++|||||||++|||++ |+.||.....
T Consensus       500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~  545 (613)
T 2ozo_A          500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG  545 (613)
T ss_dssp             --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS
T ss_pred             CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH
Confidence            4568999999886 779999999999999999998 9999987444

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=98.79  E-value=2.7e-09  Score=80.95  Aligned_cols=54  Identities=30%  Similarity=0.513  Sum_probs=40.7

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...||+.|+|||.+. ..++.++|+|||||++++|++ |..||... +.......+.
T Consensus       198 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~-~~~~~~~~~~  253 (323)
T 3qup_A          198 ASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI-ENAEIYNYLI  253 (323)
T ss_dssp             ---CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CGGGHHHHHH
T ss_pred             cccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcccc-ChHHHHHHHh
Confidence            345678899999876 569999999999999999999 89999764 3334444443

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.79  E-value=3.2e-09  Score=79.82  Aligned_cols=56  Identities=20%  Similarity=0.434  Sum_probs=43.2

Q ss_pred             eeccCCCcccccccccc-c--CCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYEE-H--YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~-~--~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ....||+.|+|||++.+ .  .+.++|+||||+++++|++|+.||.. .+.......+..
T Consensus       169 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~-~~~~~~~~~i~~  227 (305)
T 2wtk_C          169 RTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG-DNIYKLFENIGK  227 (305)
T ss_dssp             CCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC-SSHHHHHHHHHH
T ss_pred             ccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC-chHHHHHHHHhc
Confidence            35579999999998763 2  47899999999999999999999976 344444444443

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=98.79  E-value=1.9e-09  Score=85.80  Aligned_cols=53  Identities=23%  Similarity=0.410  Sum_probs=40.5

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKV   64 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i   64 (199)
                      ...+|+.|+|||++. +.++.++|+|||||++++|++ |+.||... ...+....+
T Consensus       340 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~-~~~~~~~~i  394 (452)
T 1fmk_A          340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQV  394 (452)
T ss_dssp             ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC-CHHHHHHHH
T ss_pred             CCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC-CHHHHHHHH
Confidence            346678999999876 779999999999999999999 99999763 333443333

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=98.79  E-value=2.9e-09  Score=81.06  Aligned_cols=53  Identities=19%  Similarity=0.395  Sum_probs=41.8

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKV   64 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i   64 (199)
                      ...||+.|+|||.+. +.++.++|+||||+++++|++ |..||... ........+
T Consensus       204 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-~~~~~~~~~  258 (327)
T 2yfx_A          204 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-SNQEVLEFV  258 (327)
T ss_dssp             GGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHHHHHH
T ss_pred             CcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc-CHHHHHHHH
Confidence            356789999999876 679999999999999999998 98998763 333333333

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.79  E-value=6.1e-10  Score=85.29  Aligned_cols=45  Identities=29%  Similarity=0.513  Sum_probs=24.8

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...+||+.|+|||++. ..++.++|+||||+++++|++|..||...
T Consensus       187 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  232 (336)
T 3fhr_A          187 QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN  232 (336)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             ccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence            3567899999999886 56899999999999999999999999754

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=98.79  E-value=1.8e-09  Score=85.89  Aligned_cols=44  Identities=23%  Similarity=0.497  Sum_probs=38.3

Q ss_pred             ccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCC
Q psy360           12 TQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECI   55 (199)
Q Consensus        12 ~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~   55 (199)
                      ..+|+.|+|||++. +.++.++|+|||||+++||++ |+.||....
T Consensus       346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~  391 (450)
T 1k9a_A          346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP  391 (450)
T ss_dssp             -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC
T ss_pred             CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            46788999999876 679999999999999999998 999997643

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=98.78  E-value=2.2e-09  Score=83.55  Aligned_cols=53  Identities=26%  Similarity=0.488  Sum_probs=41.8

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKV   64 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i   64 (199)
                      ...||+.|+|||++. ..++.++|+|||||++++|++ |..||.. .+.......+
T Consensus       252 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~-~~~~~~~~~~  306 (382)
T 3tt0_A          252 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLL  306 (382)
T ss_dssp             TCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTT-CCHHHHHHHH
T ss_pred             CCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHH
Confidence            446788999999876 569999999999999999999 9999975 3444444333

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.78  E-value=2.7e-09  Score=78.69  Aligned_cols=53  Identities=23%  Similarity=0.544  Sum_probs=41.8

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKV   64 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i   64 (199)
                      ...||+.|+|||.+. ..++.++|+||||+++++|++ |+.||... +.......+
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-~~~~~~~~i  218 (267)
T 3t9t_A          164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-SNSEVVEDI  218 (267)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHH
T ss_pred             cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC-CHHHHHHHH
Confidence            346778899999886 679999999999999999999 89998763 333443333

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=98.78  E-value=2.1e-09  Score=83.51  Aligned_cols=42  Identities=24%  Similarity=0.568  Sum_probs=34.4

Q ss_pred             cCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q psy360           13 QRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMEC   54 (199)
Q Consensus        13 ~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~   54 (199)
                      .+|+.|+|||++. +.++.++|+|||||++++|++ |+.||...
T Consensus       211 ~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~  254 (373)
T 2qol_A          211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM  254 (373)
T ss_dssp             ---CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC
T ss_pred             CcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence            4577899999886 679999999999999999998 99999763

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=98.78  E-value=1.8e-09  Score=83.94  Aligned_cols=44  Identities=25%  Similarity=0.503  Sum_probs=35.6

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~   54 (199)
                      ...||+.|+|||.+. +.++.++|+|||||++|+|++ |..||...
T Consensus       255 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~  300 (373)
T 3c1x_A          255 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV  300 (373)
T ss_dssp             ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred             CCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC
Confidence            456788999999876 679999999999999999999 66666553

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=98.78  E-value=4.2e-09  Score=78.05  Aligned_cols=54  Identities=19%  Similarity=0.447  Sum_probs=35.6

Q ss_pred             eccCCCccccccccccc--CCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYEEH--YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~~~--~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...||+.|+|||.+.+.  .+.++|+||||+++++|++|+.||... ........+.
T Consensus       169 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~  224 (276)
T 2h6d_A          169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE-HVPTLFKKIR  224 (276)
T ss_dssp             --------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHH
T ss_pred             cccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHhh
Confidence            45789999999988743  368999999999999999999999763 3334444443

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=98.77  E-value=2.3e-09  Score=80.87  Aligned_cols=51  Identities=25%  Similarity=0.473  Sum_probs=41.0

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYK   62 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~   62 (199)
                      ...||+.|+|||.+. ..++.++|+||||+++++|++ |..||... +......
T Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~-~~~~~~~  263 (314)
T 2ivs_A          211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI-PPERLFN  263 (314)
T ss_dssp             CCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC-CGGGHHH
T ss_pred             CCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC-CHHHHHH
Confidence            346688899999876 569999999999999999999 99999763 3334433

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=98.77  E-value=3e-09  Score=79.69  Aligned_cols=54  Identities=20%  Similarity=0.343  Sum_probs=42.5

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV   64 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i   64 (199)
                      ...||+.|+|||.+. ..++.++|+||||+++++|++|..|+....+.......+
T Consensus       187 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~  241 (298)
T 3pls_A          187 HARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFL  241 (298)
T ss_dssp             CTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHH
T ss_pred             CCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHh
Confidence            457788999999887 568999999999999999999777766555555444333

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=98.77  E-value=2.5e-09  Score=80.67  Aligned_cols=44  Identities=25%  Similarity=0.498  Sum_probs=35.6

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...||+.|+|||.+. ..++.++|+||||+++++|++|+.||...
T Consensus       195 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  239 (310)
T 2wqm_A          195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  239 (310)
T ss_dssp             ----CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred             ccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence            457899999999876 56999999999999999999999999754

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.77  E-value=1.1e-09  Score=83.13  Aligned_cols=43  Identities=19%  Similarity=0.407  Sum_probs=37.3

Q ss_pred             eccCCCccccccccc-cc-CCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EH-YDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~-~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ...||+.|+|||++. .. .+.++|+||||+++++|++|+.||..
T Consensus       207 ~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  251 (320)
T 3a99_A          207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH  251 (320)
T ss_dssp             CCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             CCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCC
Confidence            457999999999876 34 47889999999999999999999964

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=98.77  E-value=2.3e-09  Score=88.76  Aligned_cols=53  Identities=21%  Similarity=0.401  Sum_probs=40.0

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKV   64 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i   64 (199)
                      ...||+.|+|||++. ..++.++|||||||+++||++ |+.||... +.......+
T Consensus       531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~-~~~~~~~~i  585 (635)
T 4fl3_A          531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM-KGSEVTAML  585 (635)
T ss_dssp             ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC-CHHHHHHHH
T ss_pred             CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHH
Confidence            446788999999887 679999999999999999998 99999763 333343333

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=98.77  E-value=2.7e-09  Score=80.70  Aligned_cols=41  Identities=32%  Similarity=0.528  Sum_probs=36.1

Q ss_pred             ccCCCcccccccccc----cCCCcCcchhHHHHHHHHHhCCCCCC
Q psy360           12 TQRTPEFMAPEMYEE----HYDESVDVYAFGMCMLEMSTSEYPYM   52 (199)
Q Consensus        12 ~~gt~~y~ape~~~~----~~~~~~d~ws~gv~l~~l~~g~~p~~   52 (199)
                      ..||+.|+|||++.+    .++.++|+||||+++++|++|+.||.
T Consensus       203 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~  247 (317)
T 2buj_A          203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD  247 (317)
T ss_dssp             HHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTH
T ss_pred             ccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChh
Confidence            467999999998753    27899999999999999999999985

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=98.77  E-value=3e-09  Score=80.35  Aligned_cols=45  Identities=20%  Similarity=0.329  Sum_probs=39.0

Q ss_pred             eccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus        11 ~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ...||+.|+|||.+.  +.++.++|+||||+++++|++|+.||....
T Consensus       183 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  229 (320)
T 2i6l_A          183 EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH  229 (320)
T ss_dssp             GGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC
Confidence            446799999999764  569999999999999999999999997643

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=98.76  E-value=2.8e-09  Score=79.36  Aligned_cols=53  Identities=19%  Similarity=0.455  Sum_probs=41.6

Q ss_pred             ccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHH
Q psy360           12 TQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        12 ~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~   65 (199)
                      ..||+.|+|||.+. +.++.++|+||||+++++|++ |+.||... +.......+.
T Consensus       181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~-~~~~~~~~~~  235 (283)
T 3gen_A          181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF-TNSETAEHIA  235 (283)
T ss_dssp             TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS-CHHHHHHHHH
T ss_pred             CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc-ChhHHHHHHh
Confidence            45677899999876 679999999999999999998 99999763 3333333333

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=98.76  E-value=3.1e-09  Score=78.97  Aligned_cols=44  Identities=25%  Similarity=0.467  Sum_probs=38.2

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~   54 (199)
                      ...||+.|+|||.+. +.++.++|+||||+++++|++ |+.||...
T Consensus       169 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  214 (279)
T 1qpc_A          169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM  214 (279)
T ss_dssp             TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             CCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc
Confidence            345678999999886 679999999999999999999 89999763

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=98.76  E-value=2.7e-09  Score=85.93  Aligned_cols=50  Identities=28%  Similarity=0.519  Sum_probs=40.5

Q ss_pred             ccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHH
Q psy360           12 TQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYK   62 (199)
Q Consensus        12 ~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~   62 (199)
                      ..+|+.|+|||++. +.++.++|||||||+++||++ |..||... +......
T Consensus       379 ~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~-~~~~~~~  430 (495)
T 1opk_A          379 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYE  430 (495)
T ss_dssp             CCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC-CGGGHHH
T ss_pred             CcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC-CHHHHHH
Confidence            45678999999886 679999999999999999999 98998763 3444433

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=98.76  E-value=3.4e-09  Score=80.35  Aligned_cols=53  Identities=26%  Similarity=0.493  Sum_probs=41.4

Q ss_pred             ccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHH
Q psy360           12 TQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        12 ~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~   65 (199)
                      ..||+.|+|||++. +.++.++|+||||+++++|++ |..||... +.......+.
T Consensus       200 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~~~~~~~~  254 (322)
T 1p4o_A          200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFVM  254 (322)
T ss_dssp             SEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CHHHHHHHHH
T ss_pred             CCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC-CHHHHHHHHH
Confidence            35688999999876 679999999999999999999 88888653 3444444333

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.76  E-value=4.7e-09  Score=86.96  Aligned_cols=46  Identities=28%  Similarity=0.498  Sum_probs=40.8

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      .....||+.|+|||++. +.++.++|+|||||++++|++|..||...
T Consensus       180 ~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~  226 (676)
T 3qa8_A          180 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN  226 (676)
T ss_dssp             CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcc
Confidence            34568999999999886 67999999999999999999999999764

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=98.75  E-value=3.2e-09  Score=81.04  Aligned_cols=53  Identities=30%  Similarity=0.505  Sum_probs=41.9

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKV   64 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i   64 (199)
                      ...||+.|+|||++. +.++.++|+||||+++++|++ |..||.. .+.......+
T Consensus       218 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~-~~~~~~~~~~  272 (334)
T 2pvf_A          218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLL  272 (334)
T ss_dssp             CCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT-CCHHHHHHHH
T ss_pred             CCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCc-CCHHHHHHHH
Confidence            446788999999876 669999999999999999999 9999976 3444443333

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.75  E-value=3.4e-09  Score=80.98  Aligned_cols=52  Identities=29%  Similarity=0.545  Sum_probs=40.6

Q ss_pred             ccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHH
Q psy360           12 TQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKV   64 (199)
Q Consensus        12 ~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i   64 (199)
                      ..||+.|+|||.+. ..++.++|+|||||++++|++ |+.||... +.......+
T Consensus       210 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~-~~~~~~~~~  263 (333)
T 1mqb_A          210 GKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL-SNHEVMKAI  263 (333)
T ss_dssp             -CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHH
T ss_pred             CCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC-CHHHHHHHH
Confidence            35678899999876 679999999999999999998 99999763 333333333

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=98.75  E-value=2.3e-09  Score=79.97  Aligned_cols=47  Identities=17%  Similarity=0.358  Sum_probs=37.9

Q ss_pred             ccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChh
Q psy360           12 TQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPA   58 (199)
Q Consensus        12 ~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~   58 (199)
                      ..||+.|+|||++.  +.++.++|+||||+++++|++|..|+....+..
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~  225 (289)
T 4fvq_A          177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ  225 (289)
T ss_dssp             HHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred             cCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH
Confidence            46789999999775  459999999999999999999666665544443

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=98.75  E-value=1.7e-09  Score=80.40  Aligned_cols=43  Identities=28%  Similarity=0.520  Sum_probs=37.9

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYM   52 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~   52 (199)
                      ....||+.|+|||.+. ..++.++|+||||+++++|++|..|+.
T Consensus       179 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~  222 (284)
T 2a19_B          179 TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF  222 (284)
T ss_dssp             CCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred             cccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence            3557999999999876 568999999999999999999988774

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=98.75  E-value=1.4e-09  Score=82.66  Aligned_cols=41  Identities=24%  Similarity=0.461  Sum_probs=35.1

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPY   51 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~   51 (199)
                      ..+||+.|+|||++. ..++.++|+|||||++++|++|..|+
T Consensus       235 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~  276 (332)
T 3qd2_B          235 GQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ  276 (332)
T ss_dssp             SCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred             ccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCCh
Confidence            457999999999876 56999999999999999999986654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.74  E-value=3.4e-09  Score=80.75  Aligned_cols=37  Identities=27%  Similarity=0.576  Sum_probs=31.2

Q ss_pred             eccCCCcccccccccc-cCCCc------CcchhHHHHHHHHHhC
Q psy360           11 RTQRTPEFMAPEMYEE-HYDES------VDVYAFGMCMLEMSTS   47 (199)
Q Consensus        11 ~~~gt~~y~ape~~~~-~~~~~------~d~ws~gv~l~~l~~g   47 (199)
                      ..+||+.|+|||++.+ ..+.+      +|+|||||++|+|++|
T Consensus       205 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg  248 (337)
T 3mdy_A          205 TRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR  248 (337)
T ss_dssp             SSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence            4589999999998864 34443      8999999999999999

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=98.74  E-value=4.6e-09  Score=78.79  Aligned_cols=52  Identities=21%  Similarity=0.343  Sum_probs=38.5

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYK   62 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~   62 (199)
                      ...||+.|+|||.+. ..++.++|+||||+++++|++|..|+....+......
T Consensus       191 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~  243 (298)
T 3f66_A          191 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV  243 (298)
T ss_dssp             -CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHH
T ss_pred             CCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHH
Confidence            456788999999876 6799999999999999999995444443344433333

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=98.73  E-value=1.6e-09  Score=84.24  Aligned_cols=41  Identities=27%  Similarity=0.524  Sum_probs=36.2

Q ss_pred             CCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q psy360           14 RTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMEC   54 (199)
Q Consensus        14 gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~   54 (199)
                      +++.|+|||++. +.++.++|+|||||+++||++ |..||...
T Consensus       277 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~  319 (377)
T 3cbl_A          277 VPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL  319 (377)
T ss_dssp             EEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred             CCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            466799999886 679999999999999999998 99999763

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=98.73  E-value=2.7e-09  Score=79.84  Aligned_cols=43  Identities=26%  Similarity=0.478  Sum_probs=37.3

Q ss_pred             ccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q psy360           12 TQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMEC   54 (199)
Q Consensus        12 ~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~   54 (199)
                      ..||+.|+|||.+. ..++.++|+||||+++++|++ |+.||...
T Consensus       180 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~  224 (291)
T 1xbb_A          180 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM  224 (291)
T ss_dssp             -CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             CCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCC
Confidence            45678999999886 568999999999999999999 99999763

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.73  E-value=4.2e-09  Score=78.27  Aligned_cols=44  Identities=23%  Similarity=0.515  Sum_probs=37.1

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~   54 (199)
                      ...+|+.|+|||.+. ..++.++|+||||+++++|++ |+.||...
T Consensus       173 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~  218 (278)
T 1byg_A          173 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI  218 (278)
T ss_dssp             ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred             CCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence            346788999999886 679999999999999999998 99999763

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=98.73  E-value=4.6e-09  Score=78.32  Aligned_cols=44  Identities=27%  Similarity=0.478  Sum_probs=38.2

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~   54 (199)
                      ...||+.|+|||.+. ..++.++|+||||+++++|++ |..||...
T Consensus       171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~  216 (288)
T 3kfa_A          171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI  216 (288)
T ss_dssp             TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             CCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            346688899999876 679999999999999999999 98888763

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=98.72  E-value=3.5e-09  Score=80.60  Aligned_cols=43  Identities=23%  Similarity=0.449  Sum_probs=36.8

Q ss_pred             ccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCC
Q psy360           12 TQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMEC   54 (199)
Q Consensus        12 ~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~   54 (199)
                      ..+|+.|+|||++. ..++.++|+||||+++++|++ |+.||...
T Consensus       201 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~  245 (327)
T 1fvr_A          201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM  245 (327)
T ss_dssp             --CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC
Confidence            46688999999886 568999999999999999998 99999763

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=98.72  E-value=5e-09  Score=79.18  Aligned_cols=54  Identities=26%  Similarity=0.456  Sum_probs=40.2

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...|++.|+|||.+. ..++.++|+||||+++++|++ |..||... ........+.
T Consensus       208 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~~~~~~~~  263 (313)
T 3brb_A          208 IAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV-QNHEMYDYLL  263 (313)
T ss_dssp             ---CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CGGGHHHHHH
T ss_pred             ccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccC-CHHHHHHHHH
Confidence            346788999999876 569999999999999999999 88888764 3333433333

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=98.71  E-value=4.5e-09  Score=85.42  Aligned_cols=53  Identities=23%  Similarity=0.410  Sum_probs=41.7

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKV   64 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i   64 (199)
                      ...++..|+|||++. +.++.++|||||||+||||++ |+.||... ...+....+
T Consensus       423 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~-~~~~~~~~i  477 (535)
T 2h8h_A          423 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQV  477 (535)
T ss_dssp             STTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC-CHHHHHHHH
T ss_pred             CCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHH
Confidence            345678999999776 779999999999999999999 99999763 333443333

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=98.71  E-value=5.9e-09  Score=86.68  Aligned_cols=54  Identities=22%  Similarity=0.511  Sum_probs=40.7

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...||+.|+|||++. +.++.++|+|||||++++|++ |..||... +.......+.
T Consensus       551 ~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~-~~~~~~~~i~  606 (656)
T 2j0j_A          551 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV-KNNDVIGRIE  606 (656)
T ss_dssp             ---CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHH
T ss_pred             CCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHH
Confidence            456778999999886 679999999999999999997 99999763 3334444433

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=98.70  E-value=2.9e-09  Score=79.83  Aligned_cols=42  Identities=21%  Similarity=0.323  Sum_probs=36.8

Q ss_pred             ccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360           12 TQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus        12 ~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ..||+.|+|||.+. ..++.++|+||||+++++|++|..|+..
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~  219 (295)
T 3ugc_A          177 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS  219 (295)
T ss_dssp             TTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred             CCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCC
Confidence            45677899999876 6799999999999999999999998854

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.68  E-value=7.6e-09  Score=76.36  Aligned_cols=78  Identities=15%  Similarity=0.100  Sum_probs=56.2

Q ss_pred             ccccceeecCccceeEEEEEECCCCcE--EEEEEecccccC----------------------HHHHHHHHHHHHHHhcC
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVA--VAWCELQEKKLN----------------------KAERARFREEAEMLKGL  163 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~--~a~k~~~~~~~~----------------------~~~~~~~~~E~~~l~~l  163 (199)
                      .+++.+.||+|+||.||+|.+..++..  +|+|.+......                      ......+.+|+.++..+
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            367789999999999999998777888  999986432111                      01124678999999999


Q ss_pred             CCCCc--cceeeeeeeeecCCceEEEEEeccC
Q psy360          164 QHPNI--VSFYGYWEVTLTKRKYIVLVTELMT  193 (199)
Q Consensus       164 ~h~ni--v~l~~~~~~~~~~~~~~~lv~E~~~  193 (199)
                      .|+|+  ..++.+        ...+|||||+.
T Consensus       128 ~~~~i~~p~~~~~--------~~~~lVmE~~g  151 (258)
T 1zth_A          128 KEAGVSVPQPYTY--------MKNVLLMEFIG  151 (258)
T ss_dssp             HHTTCCCCCEEEE--------ETTEEEEECCE
T ss_pred             HhCCCCCCeEEEc--------CCCEEEEEecC
Confidence            88865  333331        24589999994

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=98.67  E-value=5.6e-09  Score=79.79  Aligned_cols=45  Identities=27%  Similarity=0.569  Sum_probs=36.9

Q ss_pred             eeccCCCccccccccccc-------CCCcCcchhHHHHHHHHHhC----------CCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYEEH-------YDESVDVYAFGMCMLEMSTS----------EYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~~-------~~~~~d~ws~gv~l~~l~~g----------~~p~~~~   54 (199)
                      ....||+.|+|||++.+.       ++.++|+|||||++|+|++|          ..||...
T Consensus       209 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~  270 (342)
T 1b6c_B          209 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL  270 (342)
T ss_dssp             CSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred             ccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcccc
Confidence            345899999999988643       33689999999999999999          7788654

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.65  E-value=6.2e-09  Score=78.62  Aligned_cols=44  Identities=18%  Similarity=0.433  Sum_probs=37.3

Q ss_pred             eeccCCCccccccccc-ccC-CCcCcchhHHHHHHHHHhCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHY-DESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~-~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ....||+.|+|||++. ..+ +.++|+||||+++++|++|+.||..
T Consensus       196 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  241 (312)
T 2iwi_A          196 TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER  241 (312)
T ss_dssp             CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             cccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence            3567999999999876 444 4589999999999999999999964

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.65  E-value=4e-09  Score=88.08  Aligned_cols=44  Identities=20%  Similarity=0.230  Sum_probs=38.5

Q ss_pred             eeccCCCcccccccccccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ...+||+.|+|||++.+..+.++|+|||||++++|++|..|+..
T Consensus       235 ~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~  278 (681)
T 2pzi_A          235 GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNG  278 (681)
T ss_dssp             SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred             CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcc
Confidence            34679999999998886679999999999999999999887653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=98.64  E-value=2.7e-09  Score=81.19  Aligned_cols=43  Identities=23%  Similarity=0.314  Sum_probs=37.8

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ...||+.|+|||++. ..++.++|+||||+++++|++|+.||..
T Consensus       189 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~  232 (327)
T 3lxl_A          189 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCS  232 (327)
T ss_dssp             CCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             cCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence            446788899999876 5689999999999999999999999854

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=98.62  E-value=5.6e-09  Score=77.65  Aligned_cols=41  Identities=17%  Similarity=0.251  Sum_probs=35.0

Q ss_pred             ccCCCcccccccccc--cCCCcCcchhHHHHHHHHHhCCCCCC
Q psy360           12 TQRTPEFMAPEMYEE--HYDESVDVYAFGMCMLEMSTSEYPYM   52 (199)
Q Consensus        12 ~~gt~~y~ape~~~~--~~~~~~d~ws~gv~l~~l~~g~~p~~   52 (199)
                      ..||+.|+|||++.+  .++.++|+|||||++++|++|..++.
T Consensus       190 ~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~  232 (289)
T 1x8b_A          190 EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPR  232 (289)
T ss_dssp             CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred             cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence            468999999998864  46689999999999999999987664

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=98.62  E-value=3.4e-09  Score=80.39  Aligned_cols=43  Identities=21%  Similarity=0.295  Sum_probs=37.6

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ...||+.|+|||++. ..++.++|+||||+++++|++|+.||..
T Consensus       196 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~  239 (318)
T 3lxp_A          196 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQS  239 (318)
T ss_dssp             -CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             CCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccc
Confidence            456788999999886 5688999999999999999999999864

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=98.60  E-value=4.2e-09  Score=79.08  Aligned_cols=42  Identities=21%  Similarity=0.267  Sum_probs=37.0

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYM   52 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~   52 (199)
                      ...||..|+|||.+. ..++.++|+||||+++++|++|..|+.
T Consensus       188 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  230 (302)
T 4e5w_A          188 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS  230 (302)
T ss_dssp             CTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred             CCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence            457888999999876 668899999999999999999998864

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=98.60  E-value=1.1e-08  Score=76.63  Aligned_cols=41  Identities=29%  Similarity=0.659  Sum_probs=30.6

Q ss_pred             eeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ....||+.|+|||++.  +.++.++|+|||||++++|++   ||..
T Consensus       188 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~  230 (303)
T 1zy4_A          188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST  230 (303)
T ss_dssp             ------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred             ccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence            3567999999999876  368999999999999999997   5543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=98.54  E-value=7.5e-09  Score=78.76  Aligned_cols=42  Identities=21%  Similarity=0.323  Sum_probs=36.7

Q ss_pred             ccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360           12 TQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus        12 ~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      ..||..|+|||.+. ..++.++|+||||+++++|++|..|+..
T Consensus       208 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~  250 (326)
T 2w1i_A          208 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS  250 (326)
T ss_dssp             CSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred             CCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence            45677899999876 5689999999999999999999988753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	199
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-30
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	9e-15
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	8e-20
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-06
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-19
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-08
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-19
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-05
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	6e-19
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-06
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-18
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-07
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-18
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-05
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-18
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-08
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	6e-18
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-05
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-17
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-06
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-17
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-05
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-17
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-07
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-17
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	9e-06
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-17
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-07
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-17
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-05
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-17
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-05
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-17
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-07
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-17
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-04
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	7e-17
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-05
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	7e-17
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-05
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	9e-17
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-05
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-16
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-07
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-16
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-07
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-16
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-07
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-16
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	6e-06
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	7e-16
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	4e-05
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-16
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-04
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	7e-16
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-05
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	8e-16
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	8e-07
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-15
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	6e-04
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-15
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	0.002
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-15
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-04
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-15
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-05
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-15
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-05
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	4e-15
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	6e-15
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-04
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-15
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	9e-04
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	6e-15
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	7e-04
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	7e-15
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	0.002
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	7e-15
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-05
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	8e-15
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-14
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	7e-05
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-14
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-14
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-05
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-14
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-04
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-14
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	6e-05
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-14
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-07
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	6e-14
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-04
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-13
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-04
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-12
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	5e-06
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-12
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	8e-05
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-12
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-04
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-12
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	0.003
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	7e-12
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	0.002
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	9e-12
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-04
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	9e-12
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	8e-07
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-11
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-11
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	8e-05
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-11
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-05
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-10
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-09
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	8e-06
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-08
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-04

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (275), Expect = 3e-30
 Identities = 70/92 (76%), Positives = 80/92 (86%)

Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPN 167
           +LKF+ EIGRGSFKTVY+GLDT+T V VAWCELQ++KL K+ER RF+EEAEMLKGLQHPN
Sbjct: 10  FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN 69

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           IV FY  WE T+  +K IVLVTELMTSGTLKT
Sbjct: 70  IVRFYDSWESTVKGKKCIVLVTELMTSGTLKT 101

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.5 bits (167), Expect = 9e-15
 Identities = 55/85 (64%), Positives = 60/85 (70%), Gaps = 16/85 (18%)

Query: 15  TPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAGP 74
           TPEFMAPEMYEE YDESVDVYAFGMCMLEM+TSEYPY EC   AQIY++V          
Sbjct: 176 TPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT--------- 226

Query: 75  KVVFQPISGVKPQSFERVESPEVKE 99
                  SGVKP SF++V  PEVKE
Sbjct: 227 -------SGVKPASFDKVAIPEVKE 244

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 82.5 bits (203), Expect = 8e-20
 Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 1/90 (1%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE-RARFREEAEMLKGLQHPNI 168
           +  E +G G    V+   D +    VA   L+           RFR EA+    L HP I
Sbjct: 10  ELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI 69

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           V+ Y   E          +V E +   TL+
Sbjct: 70  VAVYDTGEAETPAGPLPYIVMEYVDGVTLR 99

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 44.0 bits (103), Expect = 4e-06
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
           T ++++PE    +  D   DVY+ G  + E+ T E P+      +  Y+ V
Sbjct: 177 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 227

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.8 bits (199), Expect = 3e-19
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 2/90 (2%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
           +    IG GS+    +      G  + W EL    + +AE+     E  +L+ L+HPNIV
Sbjct: 7   EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV 66

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            +Y            + +V E    G L +
Sbjct: 67  RYYDRI--IDRTNTTLYIVMEYCEGGDLAS 94

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (123), Expect = 1e-08
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 13  QRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
             TP +M+PE      Y+E  D+++ G  + E+     P+       ++  K+  
Sbjct: 175 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF-TAFSQKELAGKIRE 228

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 81.3 bits (200), Expect = 4e-19
 Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 12/114 (10%)

Query: 87  QSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN 146
           +   +   P+  E ++ S+  Y    EE+G G+F  V+R ++  TG          K +N
Sbjct: 9   EDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVA-----KFIN 63

Query: 147 KA---ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
                ++   + E  ++  L HP +++ +  +E     +  +VL+ E ++ G L
Sbjct: 64  TPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE----DKYEMVLILEFLSGGEL 113

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 42.0 bits (98), Expect = 2e-05
 Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 2   QCNKSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
           + N   +   T  T EF APE+ + E      D++A G+    + +   P+       + 
Sbjct: 178 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE-DDLET 236

Query: 61  YKKVVSVSIT 70
            + V      
Sbjct: 237 LQNVKRCDWE 246

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 80.5 bits (198), Expect = 6e-19
 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 5/100 (5%)

Query: 100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEM 159
           ++ E +R    F + +G G+F  V    D +T   VA   + +K L   +      E  +
Sbjct: 2   KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG-KEGSMENEIAV 60

Query: 160 LKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           L  ++HPNIV+    +E       ++ L+ +L++ G L  
Sbjct: 61  LHKIKHPNIVALDDIYE----SGGHLYLIMQLVSGGELFD 96

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 11/62 (17%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 15  TPEFMAP-EMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAG 73
           TP ++AP  + ++ Y ++VD ++ G+    +     P+ +    A+++++++        
Sbjct: 172 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE-NDAKLFEQILKAEYEFDS 230

Query: 74  PK 75
           P 
Sbjct: 231 PY 232

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.3 bits (195), Expect = 2e-18
 Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 12/104 (11%)

Query: 96  EVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFRE 155
           E+K+++        +   E+G G+   V++     +G+ +A   +   ++  A R +   
Sbjct: 2   ELKDDD-------FEKISELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQIIR 53

Query: 156 EAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           E ++L     P IV FYG +         I +  E M  G+L  
Sbjct: 54  ELQVLHECNSPYIVGFYGAFY----SDGEISICMEHMDGGSLDQ 93

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (114), Expect = 2e-07
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPY 51
           T  +M+PE  +  HY    D+++ G+ ++EM+   YP 
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.0 bits (194), Expect = 3e-18
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ 164
           +  Y    + +G G    V +  + +T    A      K L    +AR RE     +  Q
Sbjct: 10  IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFAL-----KMLQDCPKAR-REVELHWRASQ 63

Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            P+IV     +E     RK +++V E +  G L +
Sbjct: 64  CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFS 98

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 1e-05
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 1   MQCNKSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQ 59
            +            TP ++APE+   E YD+S D+++ G+ M  +     P+    G A 
Sbjct: 162 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 221

Query: 60  IYK 62
              
Sbjct: 222 SPG 224

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.7 bits (191), Expect = 4e-18
 Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 8/100 (8%)

Query: 100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEM 159
           ++ E   G +   + IG GSF TVY+G        VA   L        +   F+ E  +
Sbjct: 1   DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGV 57

Query: 160 LKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           L+  +H NI+ F GY          + +VT+     +L  
Sbjct: 58  LRKTRHVNILLFMGYST-----APQLAIVTQWCEGSSLYH 92

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 3e-08
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 4/54 (7%)

Query: 15  TPEFMAPEMYE----EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
           +  +MAPE+        Y    DVYAFG+ + E+ T + PY       QI   V
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.5 bits (190), Expect = 6e-18
 Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 8/102 (7%)

Query: 102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE----RARFREEA 157
           +E++  Y    EE+G G F  V +  +  TG+  A   +++++   +     R     E 
Sbjct: 5   QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 64

Query: 158 EMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            +LK +QHPN+++ +  +E     +  ++L+ EL+  G L  
Sbjct: 65  SILKEIQHPNVITLHEVYE----NKTDVILILELVAGGELFD 102

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (97), Expect = 2e-05
 Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
           TPEF+APE+   E      D+++ G+    + +   P++      +    V +V+  
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-TKQETLANVSAVNYE 234

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 77.0 bits (189), Expect = 1e-17
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 6/106 (5%)

Query: 95  PEVKE-EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCEL-QEKKLNKAERAR 152
           P+V E   ++          EIG GSF  VY   D +    VA  ++    K +  +   
Sbjct: 2   PDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD 61

Query: 153 FREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
             +E   L+ L+HPN + + G +     +     LV E        
Sbjct: 62  IIKEVRFLQKLRHPNTIQYRGCYL----REHTAWLVMEYCLGSASD 103

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.6 bits (105), Expect = 2e-06
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 15  TPEFMAPE----MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
           TP +MAPE    M E  YD  VDV++ G+  +E++  + P       + +Y   
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA 227

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.0 bits (189), Expect = 1e-17
 Identities = 17/90 (18%), Positives = 41/90 (45%), Gaps = 7/90 (7%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
              E++GRG F  V+R ++T +         +  K+   ++   ++E  +L   +H NI+
Sbjct: 8   MIAEDLGRGEFGIVHRCVETSSKKTYM---AKFVKVKGTDQVLVKKEISILNIARHRNIL 64

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             +  +E      + +V++ E ++   +  
Sbjct: 65  HLHESFE----SMEELVMIFEFISGLDIFE 90

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 2e-05
 Identities = 11/60 (18%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 12  TQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
               PE+ APE+++ +    + D+++ G  +  + +   P+       QI + +++   T
Sbjct: 163 LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPF-LAETNQQIIENIMNAEYT 221

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 1e-17
 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 11/92 (11%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPN 167
           LK  + IG+G F  V  G      VAV       K +   A    F  EA ++  L+H N
Sbjct: 9   LKLLQTIGKGEFGDVMLGDYRGNKVAV-------KCIKNDATAQAFLAEASVMTQLRHSN 61

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           +V   G     + ++  + +VTE M  G+L  
Sbjct: 62  LVQLLGVI---VEEKGGLYIVTEYMAKGSLVD 90

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 5e-07
 Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 15  TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
             ++ APE   E+ +    DV++FG+ + E+ +        I    +  +V  
Sbjct: 163 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK 215

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 77.0 bits (189), Expect = 1e-17
 Identities = 24/109 (22%), Positives = 52/109 (47%), Gaps = 7/109 (6%)

Query: 89  FERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA 148
           +++     V+ +    +  Y    EE+G G+F  V+R  +  TG   A   +     +++
Sbjct: 9   WKQYYPQPVEIKHDHVLDHY-DIHEELGTGAFGVVHRVTERATGNNFAAKFV--MTPHES 65

Query: 149 ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           ++   R+E + +  L+HP +V+ +  +E        +V++ E M+ G L
Sbjct: 66  DKETVRKEIQTMSVLRHPTLVNLHDAFE----DDNEMVMIYEFMSGGEL 110

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 42.8 bits (100), Expect = 9e-06
 Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 2   QCNKSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
             +       T  T EF APE+ E +      D+++ G+    + +   P+       + 
Sbjct: 175 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDET 233

Query: 61  YKKVVSVSIT 70
            + V S    
Sbjct: 234 LRNVKSCDWN 243

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 2e-17
 Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 6/88 (6%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
              E+IG+G+  TVY  +D  TG  VA  ++      + ++     E  +++  ++PNIV
Sbjct: 23  TRFEKIGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIINEILVMRENKNPNIV 80

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           ++   + V       + +V E +  G+L
Sbjct: 81  NYLDSYLV----GDELWVVMEYLAGGSL 104

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 2e-07
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
           TP +MAPE+   + Y   VD+++ G+  +EM   E PY+       +Y   
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 229

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 2e-17
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 6/89 (6%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
           +   E+G G+F  VY+  + +T V  A   +     ++ E   +  E ++L    HPNIV
Sbjct: 15  EIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPNIV 72

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
                +         + ++ E    G + 
Sbjct: 73  KLLDAFY----YENNLWILIEFCAGGAVD 97

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 2e-05
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 1   MQCNKSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQ 59
           +Q   S++       PE +  E  +   YD   DV++ G+ ++EM+  E P+ E + P +
Sbjct: 164 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE-LNPMR 222

Query: 60  IYKKVVS 66
           +  K+  
Sbjct: 223 VLLKIAK 229

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.2 bits (184), Expect = 4e-17
 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 9/118 (7%)

Query: 84  VKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTG---VAVAWCEL 140
           + P +FE      V+E  +E     +K E+ IG G F  V  G     G   + VA   L
Sbjct: 4   IDPFTFEDPNE-AVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTL 62

Query: 141 QEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           +     + +R  F  EA ++    HPN++   G       K   ++++TE M +G+L 
Sbjct: 63  K-SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT----KSTPVMIITEFMENGSLD 115

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.7 bits (97), Expect = 2e-05
 Identities = 8/53 (15%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
              + APE  +   +  + DV+++G+ M E+ +        +    +   +  
Sbjct: 196 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ 248

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (185), Expect = 4e-17
 Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 12/121 (9%)

Query: 81  ISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLD---TQTGVAVAW 137
           +S + P+  + V+   +           + F E IGRG F  VY G         +  A 
Sbjct: 6   LSALNPELVQAVQHVVIGPSSL-----IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 60

Query: 138 CELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
             L  +  +  E ++F  E  ++K   HPN++S  G     L      ++V   M  G L
Sbjct: 61  KSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC---LRSEGSPLVVLPYMKHGDL 116

Query: 198 K 198
           +
Sbjct: 117 R 117

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 3e-07
 Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 1/66 (1%)

Query: 2   QCNKSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
           + +  +     +   ++MA E  + + +    DV++FG+ + E+ T   P    +    I
Sbjct: 184 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 243

Query: 61  YKKVVS 66
              ++ 
Sbjct: 244 TVYLLQ 249

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.3 bits (184), Expect = 4e-17
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 9/92 (9%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAE--MLKGLQHP 166
           +  +E IG+G F  V+RG      VAV       K  +  E   +  EAE      L+H 
Sbjct: 5   IVLQESIGKGRFGEVWRGKWRGEEVAV-------KIFSSREERSWFREAEIYQTVMLRHE 57

Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           NI+ F             + LV++    G+L 
Sbjct: 58  NILGFIAADNKDNGTWTQLWLVSDYHEHGSLF 89

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 1e-04
 Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 9/121 (7%)

Query: 15  TPEFMAPEMYEE-------HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV 67
           T  +MAPE+ ++          +  D+YA G+   E++               Y  +V  
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234

Query: 68  SITSAGPKVVFQPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGL 127
             +    + V      ++P    R +S E      + MR          R +   + + L
Sbjct: 235 DPSVEEMRKVVCE-QKLRPNIPNRWQSCEALRVMAKIMRECWYANGA-ARLTALRIKKTL 292

Query: 128 D 128
            
Sbjct: 293 S 293

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.7 bits (183), Expect = 7e-17
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 5/89 (5%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE-RARFREEAEMLKGLQHPNI 168
           KF + +G GSF TV    +  T    A   L+++ + K         E +++  L HP  
Sbjct: 11  KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           V  Y  ++      + +        +G L
Sbjct: 71  VKLYFTFQ----DDEKLYFGLSYAKNGEL 95

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 1e-05
 Identities = 10/56 (17%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 16  PEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
            ++++PE+  E+   +S D++A G  + ++     P+        I++K++ +   
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYD 228

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 7e-17
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 8/95 (8%)

Query: 106 RGYLKFEE-EIGRGSFKTVYRGL--DTQTGVAVAWCELQEKKLNKAERARFREEAEMLKG 162
           R  L  E+ E+G G+F TV +G     +    VA   L+ +  + A +     EA +++ 
Sbjct: 5   RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 64

Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           L +P IV   G  E      +  +LV E+   G L
Sbjct: 65  LDNPYIVRMIGICE-----AESWMLVMEMAELGPL 94

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 1e-05
 Identities = 9/53 (16%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
             ++ APE      +    DV++FG+ M E  +        +  +++   +  
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 225

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 9e-17
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 8/92 (8%)

Query: 108 YLKFEEEIGRGSFKTVYRGLD--TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQH 165
            L  + E+G G+F +V +G+    +  + VA   L ++   KA+      EA+++  L +
Sbjct: 10  LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVL-KQGTEKADTEEMMREAQIMHQLDN 68

Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           P IV   G  +      + ++LV E+   G L
Sbjct: 69  PYIVRLIGVCQ-----AEALMLVMEMAGGGPL 95

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 4e-05
 Identities = 8/53 (15%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
             ++ APE      +    DV+++G+ M E  +      + +   ++   +  
Sbjct: 175 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 227

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.2 bits (179), Expect = 2e-16
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 14/92 (15%)

Query: 109 LKFEEEIGRGSFKTVYRG-LDTQTGVAVAWCELQEKKLNKAE--RARFREEAEMLKGLQH 165
           L F +E+G G F  V  G    Q  VA+       K + +       F EEA+++  L H
Sbjct: 6   LTFLKELGTGQFGVVKYGKWRGQYDVAI-------KMIKEGSMSEDEFIEEAKVMMNLSH 58

Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
             +V  YG       K++ I ++TE M +G L
Sbjct: 59  EKLVQLYGVCT----KQRPIFIITEYMANGCL 86

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 4e-07
 Identities = 9/67 (13%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 1   MQCNKSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQ 59
           +  ++   ++ ++    +  PE+     +    D++AFG+ M E+ +      E    ++
Sbjct: 150 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 209

Query: 60  IYKKVVS 66
             + +  
Sbjct: 210 TAEHIAQ 216

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.8 bits (178), Expect = 2e-16
 Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 14/93 (15%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTG-VAVAWCELQEKKLNK--AERARFREEAEMLKGLQH 165
           L F +EIG G F  V+ G       VA+       K + +       F EEAE++  L H
Sbjct: 7   LTFVQEIGSGQFGLVHLGYWLNKDKVAI-------KTIREGAMSEEDFIEEAEVMMKLSH 59

Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           P +V  YG       ++  I LV E M  G L 
Sbjct: 60  PKLVQLYGVCL----EQAPICLVFEFMEHGCLS 88

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (114), Expect = 1e-07
 Identities = 11/67 (16%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 1   MQCNKSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQ 59
           +  ++   +  T+   ++ +PE++    Y    DV++FG+ M E+ +      E    ++
Sbjct: 151 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 210

Query: 60  IYKKVVS 66
           + + + +
Sbjct: 211 VVEDIST 217

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.3 bits (177), Expect = 3e-16
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 6/95 (6%)

Query: 104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE-RARFREEAEMLKG 162
           ++  + +    +G+G F  VY   + Q+   +A   L + +L KA    + R E E+   
Sbjct: 4   ALEDF-EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 62

Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           L+HPNI+  YGY+         + L+ E    GT+
Sbjct: 63  LRHPNILRLYGYFH----DATRVYLILEYAPLGTV 93

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 2e-07
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
           T +++ PEM E   +DE VD+++ G+   E    + P+ E     + YK++  V  T
Sbjct: 167 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 222

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.0 bits (176), Expect = 5e-16
 Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 15/102 (14%)

Query: 99  EEERESMRGYLKFEEEIGRGSFKTVYRG-LDTQTGVAVAWCELQEKKLNKAE--RARFRE 155
           E+E E  R  LK  E +G G F  V+ G  +  T VAV       K L +       F  
Sbjct: 5   EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAV-------KSLKQGSMSPDAFLA 57

Query: 156 EAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           EA ++K LQH  +V  Y         ++ I ++TE M +G+L
Sbjct: 58  EANLMKQLQHQRLVRLYAVVT-----QEPIYIITEYMENGSL 94

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 6e-06
 Identities = 9/67 (13%), Positives = 27/67 (40%), Gaps = 1/67 (1%)

Query: 1   MQCNKSYVNIRTQRTPEFMAP-EMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQ 59
           ++ N+       +   ++ AP  +    +    DV++FG+ + E+ T        +   +
Sbjct: 159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 218

Query: 60  IYKKVVS 66
           + + +  
Sbjct: 219 VIQNLER 225

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 7e-16
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 9/93 (9%)

Query: 109 LKFEEEIGRGSFKTVYRG---LDTQTGVAVAWCELQEKKLNKAE-RARFREEAEMLKGLQ 164
           L+  E++G GSF  V RG     +   V+VA   L+   L++ E    F  E   +  L 
Sbjct: 10  LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69

Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           H N++  YG           + +VTEL   G+L
Sbjct: 70  HRNLIRLYGVVL-----TPPMKMVTELAPLGSL 97

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 4e-05
 Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
              + APE  +   +  + D + FG+ + EM T        +  +QI  K+  
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 72.2 bits (176), Expect = 7e-16
 Identities = 22/123 (17%), Positives = 54/123 (43%), Gaps = 12/123 (9%)

Query: 77  VFQPISGVKPQSFERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVA 136
           V+  ++  +P+ +   ES  V+   ++      +   ++GRG +  V+  ++      V 
Sbjct: 9   VYTDVNTHRPREYWDYESHVVEWGNQDD----YQLVRKLGRGKYSEVFEAINITNNEKVV 64

Query: 137 WCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLTKRKYIVLVTELMTSG 195
                 K L   ++ + + E ++L+ L+  PNI++     +  ++  +   LV E + + 
Sbjct: 65  V-----KILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVS--RTPALVFEHVNNT 117

Query: 196 TLK 198
             K
Sbjct: 118 DFK 120

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 37.1 bits (85), Expect = 7e-04
 Identities = 11/55 (20%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 15  TPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV 67
           +  F  PE+    + YD S+D+++ G  +  M   + P+           ++  V
Sbjct: 192 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 246

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 71.7 bits (175), Expect = 7e-16
 Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 11/100 (11%)

Query: 100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK--AERARFREEA 157
           ++ E  R  +  + ++G G +  VY G+  +  + VA      K L +   E   F +EA
Sbjct: 10  DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV-----KTLKEDTMEVEEFLKEA 64

Query: 158 EMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
            ++K ++HPN+V   G       +     ++TE MT G L
Sbjct: 65  AVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNL 100

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (95), Expect = 4e-05
 Identities = 13/65 (20%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 1   MQCNKSYVNIRTQRTPEFMAP-EMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQ 59
           M  +    +   +   ++ AP  +    +    DV+AFG+ + E++T        I  +Q
Sbjct: 165 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 224

Query: 60  IYKKV 64
           +Y+ +
Sbjct: 225 VYELL 229

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 8e-16
 Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 5/86 (5%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
              + +G G++  V   ++  T  AVA   +  K+         ++E  + K L H N+V
Sbjct: 8   DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHENVV 66

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSG 195
            FYG+      +     L  E  + G
Sbjct: 67  KFYGHRR----EGNIQYLFLEYCSGG 88

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 8e-07
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 15  TPEFMAPEMY--EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV 65
           T  ++APE+    E + E VDV++ G+ +  M   E P+ +     Q Y    
Sbjct: 168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 220

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.5 bits (174), Expect = 1e-15
 Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 10/111 (9%)

Query: 92  VESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERA 151
           VE P   E  +     Y +   +IG+G+F  V++    +TG  VA  ++  +   +    
Sbjct: 1   VECPFCDEVSK-----Y-EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 54

Query: 152 RFREEAEMLKGLQHPNIVSFYGYWEVTLTK----RKYIVLVTELMTSGTLK 198
               E ++L+ L+H N+V+         +     +  I LV +        
Sbjct: 55  TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG 105

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 6e-04
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 2/50 (4%)

Query: 15  TPEFMAPE--MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYK 62
           T  +  PE  + E  Y   +D++  G  M EM T            Q+  
Sbjct: 184 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 233

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 2e-15
 Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 6/106 (5%)

Query: 89  FERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA 148
           F R E  +   E R     Y +  + +G G++  V   +D +TG  VA  +L     ++ 
Sbjct: 4   FYRQEVTKTAWEVRAV---Y-RDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL 59

Query: 149 ERARFREEAEMLKGLQHPNIVSFYGYWEV--TLTKRKYIVLVTELM 192
              R   E  +LK ++H N++     +    TL       LV   M
Sbjct: 60  FAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM 105

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 0.002
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 16  PEFMAPEMY--EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYK 62
             + APE+      Y ++VD+++ G  M EM T +  +       Q+ +
Sbjct: 182 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKE 230

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 2e-15
 Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 8/92 (8%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
              + IG GSF  VY+     +G  VA      KK+ + +R     E ++++ L H NIV
Sbjct: 23  TDTKVIGNGSFGVVYQAKLCDSGELVAI-----KKVLQDKR-FKNRELQIMRKLDHCNIV 76

Query: 170 SFYGYWEVTLTKRK--YIVLVTELMTSGTLKT 199
               ++  +  K+   Y+ LV + +     + 
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 108

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 1e-04
 Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 8/119 (6%)

Query: 2   QCNKSYVNIRTQRTPEFMAPEMY--EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQ 59
           Q  +   N+    +  + APE+      Y  S+DV++ G  + E+   +  +    G  Q
Sbjct: 172 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ 231

Query: 60  IYKKVVSVS------ITSAGPKVVFQPISGVKPQSFERVESPEVKEEERESMRGYLKFE 112
           + + +  +       I    P         +K   + +V  P    E        L++ 
Sbjct: 232 LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 290

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.8 bits (170), Expect = 3e-15
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 9/93 (9%)

Query: 109 LKFEEEIGRGSFKTVYRGLD---TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQH 165
           ++    IG G F  V++G+        +AVA     +   + + R +F +EA  ++   H
Sbjct: 9   IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEALTMRQFDH 67

Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           P+IV   G           + ++ EL T G L+
Sbjct: 68  PHIVKLIGVIT-----ENPVWIIMELCTLGELR 95

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (97), Expect = 2e-05
 Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 1   MQCNKSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQ 59
           M+ +  Y   + +   ++MAPE      +  + DV+ FG+CM E+        + +    
Sbjct: 158 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 217

Query: 60  IYKKVVS 66
           +  ++ +
Sbjct: 218 VIGRIEN 224

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 70.1 bits (171), Expect = 3e-15
 Identities = 17/90 (18%), Positives = 40/90 (44%), Gaps = 6/90 (6%)

Query: 104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE-RARFREEAEMLKG 162
           S++ + +    +G GSF  V+       G   A   L+++ + + +      +E  ML  
Sbjct: 2   SLQDF-QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI 60

Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELM 192
           + HP I+  +G ++      + I ++ + +
Sbjct: 61  VTHPFIIRMWGTFQ----DAQQIFMIMDYI 86

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.6 bits (97), Expect = 2e-05
 Identities = 14/52 (26%), Positives = 33/52 (63%), Gaps = 2/52 (3%)

Query: 16  PEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
           P+++APE+   + Y++S+D ++FG+ + EM     P+ +     + Y+K+++
Sbjct: 165 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS-NTMKTYEKILN 215

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.4 bits (171), Expect = 4e-15
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 3/105 (2%)

Query: 96  EVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFRE 155
           EV +     ++ Y +  + IG G+   V    D      VA  +L     N+    R   
Sbjct: 7   EVGDSTFTVLKRY-QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 65

Query: 156 EAEMLKGLQHPNIVSFYGYW--EVTLTKRKYIVLVTELMTSGTLK 198
           E  ++K + H NI+S    +  + TL + + + LV ELM +   +
Sbjct: 66  ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ 110

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (169), Expect = 6e-15
 Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 9/115 (7%)

Query: 90  ERVESPEV-KEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA 148
           E   + +V   +E E  R  +    E+G+GSF  VY G+            +  K +N+A
Sbjct: 2   EYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA 61

Query: 149 ----ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
               ER  F  EA ++K     ++V   G       + +  +++ ELMT G LK+
Sbjct: 62  ASMRERIEFLNEASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKS 112

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 1e-04
 Identities = 11/53 (20%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
              +M+PE  +   +    DV++FG+ + E++T      + +   Q+ + V+ 
Sbjct: 198 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 250

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 6e-15
 Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 10/125 (8%)

Query: 81  ISGVKPQSFERVESPEVKEEER-ESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCE 139
           ++G     +  V+  E + + + E  R  L+F + +G G+F  V               +
Sbjct: 10  VTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQ 69

Query: 140 LQEKKLNK----AERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTELMTS 194
           +  K L +    +ER     E +M+  L  H NIV+  G           I L+ E    
Sbjct: 70  VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT----LSGPIYLIFEYCCY 125

Query: 195 GTLKT 199
           G L  
Sbjct: 126 GDLLN 130

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 9e-04
 Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 1   MQCNKSYVNIRTQRTPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQ 59
           M  +   V    +   ++MAPE ++E  Y    DV+++G+ + E+ +        I    
Sbjct: 215 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 274

Query: 60  IYKKVV 65
            + K++
Sbjct: 275 NFYKLI 280

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (169), Expect = 6e-15
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 2/90 (2%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
                IG G++  V    D    V VA  ++   + ++    R   E ++L   +H NI+
Sbjct: 11  TNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENII 69

Query: 170 SFYGYWEV-TLTKRKYIVLVTELMTSGTLK 198
                    T+ + K + LVT LM +   K
Sbjct: 70  GINDIIRAPTIEQMKDVYLVTHLMGADLYK 99

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 7e-04
 Identities = 10/51 (19%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 16  PEFMAPE--MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
             + APE  +  + Y +S+D+++ G  + EM ++   +       Q+   +
Sbjct: 176 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 226

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 69.8 bits (170), Expect = 7e-15
 Identities = 21/100 (21%), Positives = 33/100 (33%), Gaps = 9/100 (9%)

Query: 104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERA----RFREEAEM 159
           +M  +      IGRG F  VY      TG   A   L +K++   +        R    +
Sbjct: 2   TMNDF-SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 60

Query: 160 LKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           +     P IV     +         +  + +LM  G L  
Sbjct: 61  VSTGDCPFIVCMSYAFH----TPDKLSFILDLMNGGDLHY 96

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 35.9 bits (82), Expect = 0.002
 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 12  TQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYME 53
           +  T  +MAPE+ +    YD S D ++ G  + ++     P+ +
Sbjct: 165 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 208

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (168), Expect = 7e-15
 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 4/89 (4%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
           +  E+IG G++  VY+  +  TG  VA  +++     +   +    E  +LK L HPNIV
Sbjct: 5   QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 64

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
                          + LV E +     K
Sbjct: 65  KLLDVIH----TENKLYLVFEFLHQDLKK 89

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 5e-05
 Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 16  PEFMAPEMY--EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYK 62
             + APE+    ++Y  +VD+++ G    EM T    +       Q+++
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 214

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (168), Expect = 8e-15
 Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 11/108 (10%)

Query: 98  KEEERESMRGYLKFEEEIGRGSFKTVYRG-----LDTQTGVAVAWCELQEKKLNKAERAR 152
            + + E  R  L F + +G G+F  V        + +   + VA   L +   +  ER  
Sbjct: 14  YDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KPSAHLTEREA 72

Query: 153 FREEAEMLKGL-QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
              E ++L  L  H NIV+  G            +++TE    G L  
Sbjct: 73  LMSELKVLSYLGNHMNIVNLLGACT----IGGPTLVITEYCCYGDLLN 116

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.6 bits (167), Expect = 1e-14
 Identities = 15/92 (16%), Positives = 35/92 (38%), Gaps = 6/92 (6%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE--RARFREEAEMLKGLQHPN 167
              + +G+GSF  V+     +T    A   L++  +   +       E+  +    +HP 
Sbjct: 5   ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF 64

Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           +   +  ++     ++ +  V E +  G L  
Sbjct: 65  LTHMFCTFQ----TKENLFFVMEYLNGGDLMY 92

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 7e-05
 Identities = 14/38 (36%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPY 51
           TP+++APE+   + Y+ SVD ++FG+ + EM   + P+
Sbjct: 166 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 203

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.0 bits (165), Expect = 2e-14
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
           +    +G G++ +V    DT+TG+ VA  +L     +     R   E  +LK ++H N++
Sbjct: 21  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80

Query: 170 SFYGYWEV--TLTKRKYIVLVTELM 192
                +    +L +   + LVT LM
Sbjct: 81  GLLDVFTPARSLEEFNDVYLVTHLM 105

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (164), Expect = 2e-14
 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 8/94 (8%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKAERARFREEAEMLKGL-QH 165
           +KF++ IG G+F  V +    + G  +  A   ++ +  +K +   F  E E+L  L  H
Sbjct: 12  IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHH 70

Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           PNI++  G  E     R Y+ L  E    G L  
Sbjct: 71  PNIINLLGACE----HRGYLYLAIEYAPHGNLLD 100

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 1e-05
 Identities = 11/53 (20%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 15  TPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
              +MA E +    Y  + DV+++G+ + E+ +        +  A++Y+K+  
Sbjct: 189 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 241

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.2 bits (163), Expect = 3e-14
 Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 98  KEEERESMRGYLKFEEEIGRGSFKTVYRG-----LDTQTGVAVAWCELQEKKLNKAERAR 152
           K    E  R  +++  +IG G+F  V++      L  +    VA   L+ ++ +   +A 
Sbjct: 4   KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLK-EEASADMQAD 62

Query: 153 FREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           F+ EA ++    +PNIV   G   V     K + L+ E M  G L  
Sbjct: 63  FQREAALMAEFDNPNIVKLLGVCAV----GKPMCLLFEYMAYGDLNE 105

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.3 bits (88), Expect = 3e-04
 Identities = 10/53 (18%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 15  TPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
              +M PE ++   Y    DV+A+G+ + E+ +        +   ++   V  
Sbjct: 205 PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRD 257

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (163), Expect = 3e-14
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 7/89 (7%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE---RARFREEAEMLKGLQHPNIV 169
           + +G G F TVY+  D  T   VA  +++    ++A+         E ++L+ L HPNI+
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
                +      +  I LV + M +    
Sbjct: 64  GLLDAFG----HKSNISLVFDFMETDLEV 88

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 6e-05
 Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 2/50 (4%)

Query: 15  TPEFMAPEMY--EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYK 62
           T  + APE+      Y   VD++A G  + E+              Q+ +
Sbjct: 163 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTR 212

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 4e-14
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 15/101 (14%)

Query: 100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTG-VAVAWCELQEKKLNKAERA--RFREE 156
           +  E  R  L+ E ++G+G F  V+ G    T  VA+       K L     +   F +E
Sbjct: 10  DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAI-------KTLKPGTMSPEAFLQE 62

Query: 157 AEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           A+++K L+H  +V  Y          + I +VTE M+ G+L
Sbjct: 63  AQVMKKLRHEKLVQLYAVVS-----EEPIYIVTEYMSKGSL 98

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 5e-07
 Identities = 11/67 (16%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 1   MQCNKSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQ 59
           ++ N+       +   ++ APE      +    DV++FG+ + E++T        +   +
Sbjct: 163 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 222

Query: 60  IYKKVVS 66
           +  +V  
Sbjct: 223 VLDQVER 229

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.5 bits (161), Expect = 6e-14
 Identities = 17/67 (25%), Positives = 33/67 (49%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
           +  E+IG G++ TV++  + +T   VA   ++    ++   +    E  +LK L+H NIV
Sbjct: 5   EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIV 64

Query: 170 SFYGYWE 176
             +    
Sbjct: 65  RLHDVLH 71

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 2e-04
 Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 15  TPEFMAPEMY--EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
           T  +  P++    + Y  S+D+++ G    E++ +  P           K++  +  T
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 4e-13
 Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 6/97 (6%)

Query: 104 SMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCEL-QEKKLNKAERARFREEAEMLKG 162
           +M  +  + + +G+G+F  V    +  TG   A   L +E  + K E A    E+ +L+ 
Sbjct: 3   TMNDF-DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61

Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            +HP + +    ++        +  V E    G L  
Sbjct: 62  TRHPFLTALKYAFQ----THDRLCFVMEYANGGELFF 94

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 4e-04
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
           TPE++APE+ E   Y  +VD +  G+ M EM     P+       ++++ ++   I 
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHERLFELILMEEIR 223

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.2 bits (150), Expect = 2e-12
 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 9/90 (10%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLKGLQHPNI 168
           +   +IG GSF  +Y G D   G  VA      K    K +  +   E+++ K +Q    
Sbjct: 10  RLGRKIGSGSFGDIYLGTDIAAGEEVAI-----KLECVKTKHPQLHIESKIYKMMQGGVG 64

Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
           +    +      +  Y V+V EL+      
Sbjct: 65  IPTIRWCG---AEGDYNVMVMELLGPSLED 91

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 43.7 bits (102), Expect = 5e-06
 Identities = 7/63 (11%), Positives = 17/63 (26%), Gaps = 1/63 (1%)

Query: 1   MQCNKSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQ 59
            Q      N     T  + +   +         D+ + G  ++  +    P+       +
Sbjct: 162 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK 221

Query: 60  IYK 62
             K
Sbjct: 222 RQK 224

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.0 bits (150), Expect = 2e-12
 Identities = 15/94 (15%), Positives = 34/94 (36%), Gaps = 10/94 (10%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK----AERARFREEAEMLKGLQ- 164
           +    +G G F +VY G+     + VA   +++ +++         R   E  +LK +  
Sbjct: 7   QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66

Query: 165 -HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
               ++    ++     +    VL+ E       
Sbjct: 67  GFSGVIRLLDWF----ERPDSFVLILERPEPVQD 96

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 8e-05
 Identities = 8/39 (20%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 15  TPEFMAPEMY--EEHYDESVDVYAFGMCMLEMSTSEYPY 51
           T  +  PE      ++  S  V++ G+ + +M   + P+
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.1 bits (150), Expect = 3e-12
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 10/92 (10%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKAERARFREEAEMLKGLQH 165
           K  + +G G+F TVY+GL    G    + VA  EL+E    KA +    +EA ++  + +
Sbjct: 12  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDN 70

Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           P++    G           + L+T+LM  G L
Sbjct: 71  PHVCRLLGICL-----TSTVQLITQLMPFGCL 97

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 1e-04
 Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 4   NKSYVNIRTQRTPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYK 62
            K Y     +   ++MA E +    Y    DV+++G+ + E+ T      + I  ++I  
Sbjct: 165 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 224

Query: 63  KVVS 66
            +  
Sbjct: 225 ILEK 228

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 61.1 bits (147), Expect = 4e-12
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
              E+IG G++  VY+  +   G   A  +++ +K ++   +    E  +LK L+H NIV
Sbjct: 5   HGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63

Query: 170 SFYGYWEVTLTKRKYIVLVTELMTSGTL 197
             Y         +K +VLV E +     
Sbjct: 64  KLYDVI----HTKKRLVLVFEHLDQDLK 87

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 35.2 bits (80), Expect = 0.003
 Identities = 8/49 (16%), Positives = 20/49 (40%), Gaps = 2/49 (4%)

Query: 16  PEFMAPEMY--EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYK 62
             + AP++    + Y  ++D+++ G    EM      +       Q+ +
Sbjct: 164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMR 212

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.0 bits (147), Expect = 7e-12
 Identities = 15/87 (17%), Positives = 34/87 (39%), Gaps = 2/87 (2%)

Query: 90  ERVESPEVKEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAE 149
           + ++  E   +    +  +    + +G GSF  V      ++G   A   L ++K+ K +
Sbjct: 25  DFLKKWETPSQNTAQLDQF-DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83

Query: 150 -RARFREEAEMLKGLQHPNIVSFYGYW 175
                  E  +L+ +  P +V     +
Sbjct: 84  QIEHTLNEKRILQAVNFPFLVKLEFSF 110

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.9 bits (82), Expect = 0.002
 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)

Query: 16  PEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
           PE +APE+   + Y+++VD +A G+ + EM+    P+     P QIY+K+
Sbjct: 202 PEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKI 250

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 60.1 bits (145), Expect = 9e-12
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 12/98 (12%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVA-------WCELQEKKLNKAERARFREEAEMLKG 162
           + +E +GRG    V R +   T    A              +  +  R    +E ++L+ 
Sbjct: 6   EPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRK 65

Query: 163 LQ-HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
           +  HPNI+     +E       +  LV +LM  G L  
Sbjct: 66  VSGHPNIIQLKDTYE----TNTFFFLVFDLMKKGELFD 99

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 38.9 bits (90), Expect = 2e-04
 Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 15  TPEFMAPEMYE-------EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV 67
           TP ++APE+ E         Y + VD+++ G+ M  +     P+        + + ++S 
Sbjct: 172 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH-RKQMLMLRMIMSG 230

Query: 68  SITSAGPK 75
           +     P+
Sbjct: 231 NYQFGSPE 238

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (145), Expect = 9e-12
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 9/92 (9%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKAERARFREEAEMLKGLQ 164
           +  ++ IG G F  VY+G+   +     V VA   L +    + +R  F  EA ++    
Sbjct: 9   VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL-KAGYTEKQRVDFLGEAGIMGQFS 67

Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGT 196
           H NI+   G      +K K ++++TE M +G 
Sbjct: 68  HHNIIRLEGVI----SKYKPMMIITEYMENGA 95

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 8e-07
 Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 4   NKSYVNIRTQRTPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYK 62
             +Y     +    + APE +    +  + DV++FG+ M E+ T        +   ++ K
Sbjct: 165 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK 224

Query: 63  KVVS 66
            +  
Sbjct: 225 AIND 228

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 1e-11
 Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 8/96 (8%)

Query: 109 LKFEEEIGRGSFKTVYRGLD-----TQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL 163
           LK  + +GRG+F  V          T T   VA   L+E   +   RA   E   ++   
Sbjct: 15  LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 74

Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
            H N+V+  G           ++++ E    G L T
Sbjct: 75  HHLNVVNLLGACT---KPGGPLMVIVEFCKFGNLST 107

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.9 bits (144), Expect = 1e-11
 Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 5/94 (5%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQT-GVAVAWCELQEKKLNKAERARFREEAEMLKGL---QH 165
           +   EIG G++  V++  D +  G  VA   ++ +   +        E  +L+ L   +H
Sbjct: 10  ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 69

Query: 166 PNIVSFYGYWEVTLTKRK-YIVLVTELMTSGTLK 198
           PN+V  +    V+ T R+  + LV E +      
Sbjct: 70  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT 103

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (92), Expect = 8e-05
 Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 11/95 (11%)

Query: 15  TPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT--- 70
           T  + APE + +  Y   VD+++ G    EM   +  +           K++ V      
Sbjct: 178 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF-RGSSDVDQLGKILDVIGLPGE 236

Query: 71  ------SAGPKVVFQPISGVKPQSFERVESPEVKE 99
                  A P+  F   S    + F        K+
Sbjct: 237 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKD 271

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.5 bits (143), Expect = 2e-11
 Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 11/98 (11%)

Query: 109 LKFEEEIGRGSFKTVYRGLDTQT-------GVAVAWCELQEKKLNKAERARFREEAEMLK 161
           L   + +G G+F  V                  VA   L+     K       E   M  
Sbjct: 15  LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM 74

Query: 162 GLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
             +H NI++  G       +   + ++ E  + G L+ 
Sbjct: 75  IGKHKNIINLLGACT----QDGPLYVIVEYASKGNLRE 108

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (97), Expect = 2e-05
 Identities = 12/53 (22%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 15  TPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
             ++MAPE +++  Y    DV++FG+ + E+ T        +   +++K +  
Sbjct: 200 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 252

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 2e-10
 Identities = 16/103 (15%), Positives = 44/103 (42%), Gaps = 11/103 (10%)

Query: 101 ERESMRGYLKFEEEIGRGSFKTVYRGLDT---QTGVAVAWCELQEKKLNKAERA--RFRE 155
           E+  +  + +  + +G G++  V+         TG   A   L++  + +  +     R 
Sbjct: 19  EKVGIENF-ELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRT 77

Query: 156 EAEMLKGLQH-PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
           E ++L+ ++  P +V+ +  ++        + L+ + +  G L
Sbjct: 78  ERQVLEHIRQSPFLVTLHYAFQ----TETKLHLILDYINGGEL 116

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 52.5 bits (125), Expect = 4e-09
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 9/84 (10%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNI 168
           K    IG GSF  ++ G +      VA      K   + ++  + R+E    K L     
Sbjct: 8   KVGRRIGEGSFGVIFEGTNLLNNQQVAI-----KFEPRRSDAPQLRDEYRTYKLLAGCTG 62

Query: 169 VSFYGYWEVTLTKRKYIVLVTELM 192
           +    Y+        + VLV +L+
Sbjct: 63  IPNVYYFGQE---GLHNVLVIDLL 83

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 42.9 bits (100), Expect = 8e-06
 Identities = 7/53 (13%), Positives = 18/53 (33%), Gaps = 3/53 (5%)

Query: 15  TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
           T  +M+   +         D+ A G   +        +  ++     Q Y+++
Sbjct: 176 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI 228

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.8 bits (120), Expect = 2e-08
 Identities = 11/67 (16%), Positives = 23/67 (34%), Gaps = 3/67 (4%)

Query: 110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIV 169
               ++G G F TV+   D      VA   +   + +K       +E ++L+ +   +  
Sbjct: 16  ILVRKLGWGHFSTVWLAKDMVNNTHVAMKIV---RGDKVYTEAAEDEIKLLQRVNDADNT 72

Query: 170 SFYGYWE 176
                  
Sbjct: 73  KEDSMGA 79

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 39.0 bits (90), Expect = 1e-04
 Identities = 9/83 (10%), Positives = 19/83 (22%), Gaps = 17/83 (20%)

Query: 113 EEIGRGSFKTVYRGLDTQTGVAVA----------------WCELQEKKLNKAERARFREE 156
           + +G G    V+                              +  +   +       R E
Sbjct: 6   KLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNE 64

Query: 157 AEMLKGLQHPNIVSFYGYWEVTL 179
              L+ LQ   +   Y +    +
Sbjct: 65  FRALQKLQGLAVPKVYAWEGNAV 87

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	199
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.84
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.84
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.83
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.82
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.81
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.81
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.8
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.8
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.8
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.8
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.79
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.79
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.79
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.79
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.79
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.78
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.78
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.78
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.78
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.77
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.77
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.77
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.76
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.76
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.76
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.75
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.75
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.74
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.74
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.74
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.74
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.74
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.74
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.73
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.73
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.73
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.71
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.71
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.71
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.71
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.7
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.7
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.7
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.69
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.68
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.67
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.67
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.67
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.65
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.65
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.65
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.63
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.62
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.62
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.6
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.6
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.58
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.57
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.57
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.55
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.49
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.48
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.48
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.48
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.47
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.46
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.45
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.45
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.44
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.43
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.43
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.41
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.4
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.4
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.4
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.39
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.39
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.38
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.38
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.37
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.36
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.34
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.34
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.34
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.34
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.33
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.33
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.32
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.31
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.31
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.3
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.29
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.29
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.27
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.27
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.26
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.26
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.26
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.25
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.25
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.24
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.24
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.23
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.21
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.18
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.18
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.17
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.16
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.15
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.15
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.13
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.12
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.11
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.06
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.06
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.05
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.04
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.04
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.02
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.01
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.95
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.92
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	98.89
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	98.88
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	98.83
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	93.34
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	92.39
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	89.14

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.9e-21  Score=142.38  Aligned_cols=92  Identities=75%  Similarity=1.194  Sum_probs=81.2

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +++++...||+|+||+||+|.+..++..||+|.+..........+.+.+|++++++++|||||+++++|.+.......+|
T Consensus         9 ry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~   88 (270)
T d1t4ha_           9 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV   88 (270)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             CEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEE
Confidence            46788889999999999999999999999999998776677777889999999999999999999999864333456789


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      ||||||++|+|.
T Consensus        89 ivmE~~~~g~L~  100 (270)
T d1t4ha_          89 LVTELMTSGTLK  100 (270)
T ss_dssp             EEEECCCSCBHH
T ss_pred             EEEeCCCCCcHH
Confidence            999999999985

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.2e-21  Score=142.91  Aligned_cols=91  Identities=25%  Similarity=0.399  Sum_probs=78.9

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .++|++.+.||+|+||+||+|.+..++..||+|.+..........+.+.+|+.++++++|||||++++++.+.  ..+.+
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~~~   80 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR--TNTTL   80 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC------CE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeC--CCCEE
Confidence            3678999999999999999999999999999999987766777778899999999999999999999988521  35678


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |||||||+||+|.
T Consensus        81 ~ivmEy~~~g~L~   93 (269)
T d2java1          81 YIVMEYCEGGDLA   93 (269)
T ss_dssp             EEEEECCTTEEHH
T ss_pred             EEEEecCCCCcHH
Confidence            9999999999985

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=7e-21  Score=141.52  Aligned_cols=94  Identities=28%  Similarity=0.489  Sum_probs=81.9

Q ss_pred             hhhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeee
Q psy360           98 KEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEV  177 (199)
Q Consensus        98 ~~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  177 (199)
                      ..+.|+...+.|++.+.||+|+||+||+|.+..++..||+|.+......   .+.+.+|+.++++++|||||+++++|. 
T Consensus         8 ~~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~---~~~~~~E~~il~~l~HpnIv~~~~~~~-   83 (287)
T d1opja_           8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCT-   83 (287)
T ss_dssp             TCCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSC---HHHHHHHHHHHHHCCCTTBCCEEEEEC-
T ss_pred             CCcccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccch---HHHHHHHHHHHHhCCCCCEecCCccEe-
Confidence            3445667778899999999999999999999999999999998654333   356899999999999999999999987 


Q ss_pred             eecCCceEEEEEeccCCCCCC
Q psy360          178 TLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~~~~~~~~lv~E~~~~G~L~  198 (199)
                         ..+..+||||||++|+|.
T Consensus        84 ---~~~~~~iv~E~~~~g~l~  101 (287)
T d1opja_          84 ---REPPFYIITEFMTYGNLL  101 (287)
T ss_dssp             ---SSSSCEEEEECCTTCBHH
T ss_pred             ---eCCeeEEEeecccCcchH
Confidence               778899999999999874

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=8.8e-21  Score=139.78  Aligned_cols=89  Identities=24%  Similarity=0.281  Sum_probs=75.3

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .++|++.+.||+|+||+||+|.+..++..||+|.+.... .....+.+.+|+.++++++|||||++++++.    +.+..
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~----~~~~~   78 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRR----EGNIQ   78 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHTCCCTTBCCEEEEEE----ETTEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhh-cchHHHHHHHHHHHHHhCCCCCEeeEeeeec----cCcee
Confidence            357899999999999999999999999999999986543 2223466899999999999999999999998    77899


Q ss_pred             EEEEeccCCCCCCC
Q psy360          186 VLVTELMTSGTLKT  199 (199)
Q Consensus       186 ~lv~E~~~~G~L~~  199 (199)
                      |||||||+||+|.+
T Consensus        79 ~ivmEy~~gg~L~~   92 (271)
T d1nvra_          79 YLFLEYCSGGELFD   92 (271)
T ss_dssp             EEEEECCTTEEGGG
T ss_pred             EEEEeccCCCcHHH
Confidence            99999999999863

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.1e-20  Score=139.32  Aligned_cols=90  Identities=27%  Similarity=0.513  Sum_probs=78.8

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH----HHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA----ERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      ..++|++++.||+|+||+||+|.+..++..||+|.+........    ..+.+.+|+.++++++|||||+++++|.    
T Consensus         8 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~----   83 (293)
T d1jksa_           8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE----   83 (293)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE----
T ss_pred             cccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEE----
Confidence            45679999999999999999999999999999999865433221    2467999999999999999999999998    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      +.+..|||||||+||+|.
T Consensus        84 ~~~~~~iv~E~~~gg~L~  101 (293)
T d1jksa_          84 NKTDVILILELVAGGELF  101 (293)
T ss_dssp             CSSEEEEEEECCCSCBHH
T ss_pred             ECCEEEEEEEcCCCcccc
Confidence            788999999999999985

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.81  E-value=3.5e-20  Score=138.86  Aligned_cols=89  Identities=27%  Similarity=0.458  Sum_probs=73.7

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..+.|++.+.||+|+||+||+|.+..++..||+|.+...... ...+.+.+|+.++++++|||||++++++.    .++.
T Consensus         7 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~----~~~~   81 (307)
T d1a06a_           7 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE-GKEGSMENEIAVLHKIKHPNIVALDDIYE----SGGH   81 (307)
T ss_dssp             GGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-----------CHHHHHHHTCCCTTBCCEEEEEE----CSSE
T ss_pred             CccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh-hHHHHHHHHHHHHHhCCCCCCCcEEEEEE----ECCE
Confidence            456799999999999999999999999999999998754332 23456889999999999999999999998    7889


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .|||||||+||+|.
T Consensus        82 ~~lvmE~~~gg~L~   95 (307)
T d1a06a_          82 LYLIMQLVSGGELF   95 (307)
T ss_dssp             EEEEECCCCSCBHH
T ss_pred             EEEEEeccCCCcHH
Confidence            99999999999984

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.8e-20  Score=140.36  Aligned_cols=89  Identities=24%  Similarity=0.329  Sum_probs=78.8

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCce
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ..++|++.+.||+|+||+||+|.+..++..||+|.+.... .....+.+.+|+.++++++|||||+++++|.    ..+.
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~----~~~~   78 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFY----SDGE   78 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC-CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEE----CSSE
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE----ECCE
Confidence            4568999999999999999999999999999999986432 3344567899999999999999999999998    7888


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .|||||||+||+|.
T Consensus        79 ~~iVmEy~~gg~L~   92 (322)
T d1s9ja_          79 ISICMEHMDGGSLD   92 (322)
T ss_dssp             EEEEEECCTTEEHH
T ss_pred             EEEEEEcCCCCcHH
Confidence            99999999999884

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=7.7e-20  Score=136.08  Aligned_cols=87  Identities=24%  Similarity=0.376  Sum_probs=76.7

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.|++.+.||+|+||+||+|.+..++..||+|.+......  ..+.+.+|+.++++++|||||++++++.    ..+..
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~HpnIv~~~~~~~----~~~~~   92 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYL----VGDEL   92 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTTBCCEEEEEE----ETTEE
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh--HHHHHHHHHHHHHhCCCCCEeeEeEEEE----ECCEE
Confidence            35689999999999999999999999999999998654322  2466899999999999999999999998    67889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |||||||+||+|.
T Consensus        93 ~ivmEy~~gg~L~  105 (293)
T d1yhwa1          93 WVVMEYLAGGSLT  105 (293)
T ss_dssp             EEEEECCTTCBHH
T ss_pred             EEEEEecCCCcHH
Confidence            9999999999984

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=5.1e-20  Score=135.10  Aligned_cols=88  Identities=30%  Similarity=0.516  Sum_probs=76.6

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH-HHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA-ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ++|++.+.||+|+||+||+|.+..++..||+|.+........ ..+.+.+|+.++++++|||||++++++.    +++..
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~----~~~~~   81 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----DATRV   81 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE----CSSEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEE----ECCEE
Confidence            568999999999999999999999999999999865432221 2456889999999999999999999998    78899


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |||||||++|+|.
T Consensus        82 ~ivmEy~~~g~L~   94 (263)
T d2j4za1          82 YLILEYAPLGTVY   94 (263)
T ss_dssp             EEEEECCTTCBHH
T ss_pred             EEEEeecCCCcHH
Confidence            9999999999984

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.9e-20  Score=138.14  Aligned_cols=86  Identities=23%  Similarity=0.433  Sum_probs=76.3

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.+.||+|+||+||+|.+..++..+|+|.+...  .....+.+.+|+.++++++|||||++++++.    ..+..|
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~----~~~~~~   85 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFY----YENNLW   85 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--SSGGGGGTHHHHHHHHHCCCTTBCCEEEEEE----ETTEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe----eCCeEE
Confidence            5689999999999999999999999999999998643  2234467889999999999999999999988    678999


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      ||||||+||+|.
T Consensus        86 lvmEy~~~g~L~   97 (288)
T d2jfla1          86 ILIEFCAGGAVD   97 (288)
T ss_dssp             EEEECCTTEEHH
T ss_pred             EEEecCCCCcHH
Confidence            999999999874

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.79  E-value=1.7e-19  Score=137.44  Aligned_cols=87  Identities=23%  Similarity=0.436  Sum_probs=77.7

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .++|++.+.||+|+||.||+|.+..++..||+|.+...  .....+.+.+|+.++++++|||||+++++|.    .++.+
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~--~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~----~~~~~  101 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP--YPLDKYTVKNEISIMNQLHHPKLINLHDAFE----DKYEM  101 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEE----CSSEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCc--chhHHHHHHHHHHHHHhCCCCCCCcEEEEEE----ECCEE
Confidence            35789999999999999999999999999999998643  3344567889999999999999999999998    78899


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |||||||+||+|.
T Consensus       102 ~ivmE~~~gg~L~  114 (352)
T d1koba_         102 VLILEFLSGGELF  114 (352)
T ss_dssp             EEEEECCCCCBHH
T ss_pred             EEEEEcCCCChHH
Confidence            9999999999984

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=8.7e-20  Score=137.53  Aligned_cols=86  Identities=20%  Similarity=0.283  Sum_probs=76.4

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      .+.|++.+.||+|+||+||+|.+..++..+|+|.+...   ......+.+|+.+++.++|||||++++++.    +.+.+
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~---~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~----~~~~~   76 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFE----SMEEL   76 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEE----ETTEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCC---cccHHHHHHHHHHHHhCCCCCCCeEEEEEE----ECCEE
Confidence            45689999999999999999999999999999999653   233456889999999999999999999998    67899


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |||||||+||+|.
T Consensus        77 ~lvmE~~~gg~L~   89 (321)
T d1tkia_          77 VMIFEFISGLDIF   89 (321)
T ss_dssp             EEEECCCCCCBHH
T ss_pred             EEEEecCCCCcHH
Confidence            9999999999984

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=5.2e-20  Score=136.73  Aligned_cols=88  Identities=23%  Similarity=0.322  Sum_probs=76.8

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ++|++.+.||+|+||+||+|.+..++..||+|.+....... ...+.+.+|+.++++++||||+++++++.    +.+..
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~----~~~~~   83 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ----DDEKL   83 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEE----CSSEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEE----ECCEE
Confidence            56899999999999999999999999999999986543221 23467899999999999999999999998    78899


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |||||||+||+|.
T Consensus        84 ~ivmEy~~gg~L~   96 (288)
T d1uu3a_          84 YFGLSYAKNGELL   96 (288)
T ss_dssp             EEEECCCTTEEHH
T ss_pred             EEEEEccCCCCHH
Confidence            9999999999884

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.79  E-value=1.6e-19  Score=137.44  Aligned_cols=86  Identities=26%  Similarity=0.425  Sum_probs=77.4

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ++|++.+.||+|+||.||+|.+..++..||+|.+...  .....+.+.+|+.++++++|||||++++++.    ..+..|
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~--~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~----~~~~~~   99 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP--HESDKETVRKEIQTMSVLRHPTLVNLHDAFE----DDNEMV   99 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCC--SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEE----ETTEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEccc--chhhHHHHHHHHHHHHhCCCCCCCcEEEEEE----ECCEEE
Confidence            5789999999999999999999999999999998643  3445677899999999999999999999988    678999


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      ||||||+||+|.
T Consensus       100 ivmE~~~gg~L~  111 (350)
T d1koaa2         100 MIYEFMSGGELF  111 (350)
T ss_dssp             EEECCCCSCBHH
T ss_pred             EEEEcCCCCCHH
Confidence            999999999984

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.79  E-value=9.1e-20  Score=136.69  Aligned_cols=87  Identities=24%  Similarity=0.336  Sum_probs=77.0

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      +.|+.++.||+|+||+||+|.+..++..||+|.+....... ...+.+.+|+.++++++|||||++++++.    ..+..
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~----~~~~~   90 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL----REHTA   90 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE----ETTEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEE----ECCEE
Confidence            45899999999999999999999999999999987654443 34567999999999999999999999987    67889


Q ss_pred             EEEEeccCCCCC
Q psy360          186 VLVTELMTSGTL  197 (199)
Q Consensus       186 ~lv~E~~~~G~L  197 (199)
                      |||||||++|+|
T Consensus        91 ~iv~E~~~~g~l  102 (309)
T d1u5ra_          91 WLVMEYCLGSAS  102 (309)
T ss_dssp             EEEEECCSEEHH
T ss_pred             EEEEEecCCCch
Confidence            999999999876

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=3e-20  Score=137.32  Aligned_cols=90  Identities=29%  Similarity=0.405  Sum_probs=76.2

Q ss_pred             hhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          101 ERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       101 ~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      +|+...+.|++.+.||+|+||+||+|.+..   .||+|.+..........+.|.+|+.++++++|||||++++++.    
T Consensus         2 dwei~~~~~~~~~~lG~G~fg~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~----   74 (276)
T d1uwha_           2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST----   74 (276)
T ss_dssp             CCBCCTTCCCCCSEEEECSSCEEEEEESSS---EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC----
T ss_pred             CcccccccEEEEEEEeeCCCcEEEEEEECC---EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe----
Confidence            455667889999999999999999997543   5999998765555556788999999999999999999999874    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                       .+..+||||||+||+|.
T Consensus        75 -~~~~~lv~Ey~~~g~L~   91 (276)
T d1uwha_          75 -APQLAIVTQWCEGSSLY   91 (276)
T ss_dssp             -SSSCEEEEECCCEEEHH
T ss_pred             -ccEEEEEEecCCCCCHH
Confidence             45679999999999984

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.4e-19  Score=132.19  Aligned_cols=90  Identities=32%  Similarity=0.483  Sum_probs=75.8

Q ss_pred             hhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee
Q psy360          100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL  179 (199)
Q Consensus       100 ~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  179 (199)
                      ++|+...+.|++.+.||+|+||.||+|.+. ++..||+|.+......   .+.|.+|+.++++++|||||++++++.   
T Consensus         6 ~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~HpnIv~~~g~~~---   78 (272)
T d1qpca_           6 DEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVVT---   78 (272)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred             CCeecCHHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCC---HHHHHHHHHHHHhCCCCCEeEEEeeec---
Confidence            456667788999999999999999999975 5678999998654333   356999999999999999999999874   


Q ss_pred             cCCceEEEEEeccCCCCCC
Q psy360          180 TKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G~L~  198 (199)
                        .+..|||||||++|+|.
T Consensus        79 --~~~~~iv~Ey~~~g~L~   95 (272)
T d1qpca_          79 --QEPIYIITEYMENGSLV   95 (272)
T ss_dssp             --SSSCEEEEECCTTCBHH
T ss_pred             --cCCeEEEEEeCCCCcHH
Confidence              45679999999999984

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=2e-19  Score=134.26  Aligned_cols=89  Identities=29%  Similarity=0.461  Sum_probs=74.1

Q ss_pred             cccccccceeecCccceeEEEEEECCCCc---EEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGV---AVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~---~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      ..++|++.+.||+|+||+||+|.+..++.   .+|+|.+... ......+.|.+|+.++++++|||||+++++|.    .
T Consensus        24 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~----~   98 (299)
T d1jpaa_          24 DISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT----K   98 (299)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC----S
T ss_pred             ChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcc-cCHHHHHHHHHHHHHHHhCCCCCCccEEEEEe----e
Confidence            34678999999999999999999876543   5888887533 34556678999999999999999999999987    7


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..+||||||++|+|.
T Consensus        99 ~~~~~iv~Ey~~~g~L~  115 (299)
T d1jpaa_          99 STPVMIITEFMENGSLD  115 (299)
T ss_dssp             SSSCEEEEECCTTEEHH
T ss_pred             CCEEEEEEEecCCCcce
Confidence            78899999999999874

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.78  E-value=3e-19  Score=131.92  Aligned_cols=89  Identities=25%  Similarity=0.322  Sum_probs=77.4

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-------HHHHHHHHHHHHHHhcCC-CCCccceeeeeee
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-------KAERARFREEAEMLKGLQ-HPNIVSFYGYWEV  177 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~  177 (199)
                      .++|++.+.||+|+||+||+|++..++..+|+|.+......       ....+.+.+|+.++++++ ||||+++++++. 
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-   80 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE-   80 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE-
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc-
Confidence            36789999999999999999999999999999998654322       123456889999999997 999999999998 


Q ss_pred             eecCCceEEEEEeccCCCCCC
Q psy360          178 TLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       178 ~~~~~~~~~lv~E~~~~G~L~  198 (199)
                         +++.+|||||||+||+|.
T Consensus        81 ---~~~~~~ivmE~~~~g~L~   98 (277)
T d1phka_          81 ---TNTFFFLVFDLMKKGELF   98 (277)
T ss_dssp             ---CSSEEEEEEECCTTCBHH
T ss_pred             ---cCcceEEEEEcCCCchHH
Confidence               788999999999999985

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.77  E-value=5.8e-19  Score=130.45  Aligned_cols=94  Identities=26%  Similarity=0.274  Sum_probs=79.5

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  183 (199)
                      ..++|++.+.||+|+||.||+|.+..++..||+|.+..... .....+.+.+|+.++++++|||||++++++........
T Consensus         5 l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~   84 (277)
T d1o6ya_           5 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   84 (277)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSE
T ss_pred             ccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCc
Confidence            34678999999999999999999999999999999975543 34456779999999999999999999998874333345


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..|||||||+||+|.
T Consensus        85 ~~~lvmE~~~g~~L~   99 (277)
T d1o6ya_          85 LPYIVMEYVDGVTLR   99 (277)
T ss_dssp             EEEEEEECCCEEEHH
T ss_pred             eEEEEEECCCCCEeh
Confidence            689999999999874

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.77  E-value=3.2e-19  Score=134.14  Aligned_cols=88  Identities=20%  Similarity=0.319  Sum_probs=76.6

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ++|++++.||+|+||+||+|.+..++..||+|.+....... ...+.+.+|+.++++++|||||++++++.    ..+..
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~----~~~~~   79 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ----DAQQI   79 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE----CSSEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEe----eCCee
Confidence            46899999999999999999999999999999986543221 23467889999999999999999999998    78899


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |+|||||+||+|.
T Consensus        80 ~ivmE~~~gg~l~   92 (316)
T d1fota_          80 FMIMDYIEGGELF   92 (316)
T ss_dssp             EEEECCCCSCBHH
T ss_pred             eeEeeecCCcccc
Confidence            9999999999863

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=3.8e-19  Score=130.49  Aligned_cols=84  Identities=36%  Similarity=0.500  Sum_probs=72.9

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ++|++.+.||+|+||.||+|.+. ++..||+|.+.......   +.|.+|+.++++++|||||+++++|.    ..+..+
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~---~~~~~E~~~l~~l~HpnIv~~~g~~~----~~~~~~   76 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLYGVCL----EQAPIC   76 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCH---HHHHHHHHHHHHCCCTTBCCEEEEEC----SSSSCE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcH---HHHHHHHHHHHhcCCCCcccccceec----cCCceE
Confidence            56889999999999999999876 45679999987544333   56999999999999999999999987    678899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      ||||||++|+|.
T Consensus        77 lv~E~~~~g~L~   88 (263)
T d1sm2a_          77 LVFEFMEHGCLS   88 (263)
T ss_dssp             EEEECCTTCBHH
T ss_pred             EEEEecCCCcHH
Confidence            999999999984

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=6.3e-19  Score=128.91  Aligned_cols=84  Identities=32%  Similarity=0.483  Sum_probs=73.6

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ++|++.+.||+|+||.||+|.++ ++..||+|.+.......   +.|.+|+.++++++||||++++++|.    +++.++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~---~~~~~Ev~~~~~l~HpnIv~~~g~~~----~~~~~~   75 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVCT----KQRPIF   75 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCH---HHHHHHHHHHHTCCCTTBCCEEEEEC----CSSSEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCH---HHHHHHHHHHHhcCCCceeeEEEEEe----eCCceE
Confidence            57889999999999999999974 67789999987654443   46999999999999999999999987    678899


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      +||||+++|+|.
T Consensus        76 iv~Ey~~~g~l~   87 (258)
T d1k2pa_          76 IITEYMANGCLL   87 (258)
T ss_dssp             EEEECCTTEEHH
T ss_pred             EEEEccCCCcHH
Confidence            999999999863

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=5.2e-19  Score=133.94  Aligned_cols=88  Identities=20%  Similarity=0.283  Sum_probs=77.3

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ++|++++.||+|+||+||+|.+..++..||+|.+.+..... ...+.+.+|+.++++++||||+++++++.    +.+.+
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~----~~~~~   80 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ----THDRL   80 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEE----CSSEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeec----ccccc
Confidence            57899999999999999999999999999999997543222 23466889999999999999999999998    78899


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      |+|||||+||+|.
T Consensus        81 ~iv~ey~~gg~L~   93 (337)
T d1o6la_          81 CFVMEYANGGELF   93 (337)
T ss_dssp             EEEEECCTTCBHH
T ss_pred             ccceeccCCCchh
Confidence            9999999999984

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1e-18  Score=129.46  Aligned_cols=87  Identities=28%  Similarity=0.450  Sum_probs=71.2

Q ss_pred             cccccccee-ecCccceeEEEEEECC--CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          106 RGYLKFEEE-IGRGSFKTVYRGLDTQ--TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       106 ~~~~~~~~~-lG~G~fg~v~~~~~~~--~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ++++.+.+. ||+|+||.||+|.++.  ++..||+|.+... ......+.|.+|+.++++++|||||++++++.     .
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~-----~   80 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-----A   80 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----S
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChh-cCHHHHHHHHHHHHHHHhCCCCCEeeEeeeec-----c
Confidence            356677774 9999999999997653  4568999998643 34556778999999999999999999999885     3


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..|||||||++|+|.
T Consensus        81 ~~~~lvmE~~~~g~L~   96 (285)
T d1u59a_          81 EALMLVMEMAGGGPLH   96 (285)
T ss_dssp             SSEEEEEECCTTEEHH
T ss_pred             CeEEEEEEeCCCCcHH
Confidence            4579999999999884

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.1e-18  Score=129.35  Aligned_cols=91  Identities=31%  Similarity=0.472  Sum_probs=75.7

Q ss_pred             hhhhhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360           99 EEERESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus        99 ~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      ...|+...++|++.+.||+|+||+||+|.+..+ ..||+|.+......   .+.|.+|+.++++++|+|||+++++|.  
T Consensus         9 ~~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~g~~~--   82 (285)
T d1fmka3           9 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVS--   82 (285)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred             CcceEcCHHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCC---HHHHHHHHHHHHhcccCCEeEEEEEEe--
Confidence            445556678899999999999999999998765 46999998654433   356999999999999999999999885  


Q ss_pred             ecCCceEEEEEeccCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~  198 (199)
                         .+..++|||||++|+|.
T Consensus        83 ---~~~~~lv~Ey~~~g~l~   99 (285)
T d1fmka3          83 ---EEPIYIVTEYMSKGSLL   99 (285)
T ss_dssp             ---SSSCEEEECCCTTCBHH
T ss_pred             ---cCCeEEEEEecCCCchh
Confidence               34579999999999864

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=7.4e-19  Score=131.17  Aligned_cols=86  Identities=26%  Similarity=0.380  Sum_probs=72.4

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ++|++++.||+|+||+||+|.+..++..||+|.+..........+.+.+|+.++++++|||||++++++.    ..+..|
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~----~~~~~~   77 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH----TENKLY   77 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEE----ETTEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccc----ccccee
Confidence            4789999999999999999999999999999999654433334567899999999999999999999998    678999


Q ss_pred             EEEeccCCCC
Q psy360          187 LVTELMTSGT  196 (199)
Q Consensus       187 lv~E~~~~G~  196 (199)
                      +||||+.++.
T Consensus        78 iv~e~~~~~~   87 (298)
T d1gz8a_          78 LVFEFLHQDL   87 (298)
T ss_dssp             EEEECCSEEH
T ss_pred             EEEeecCCch
Confidence            9999998753

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.8e-18  Score=127.53  Aligned_cols=91  Identities=27%  Similarity=0.422  Sum_probs=75.6

Q ss_pred             hhhcccccccceeecCccceeEEEEEECCC---CcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeee
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQT---GVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVT  178 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  178 (199)
                      |+..+++|++.+.||+|+||+||+|.+..+   +..+|+|.+.. .......+.+.+|+.++++++|||||++++++.  
T Consensus         2 ~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~-~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~--   78 (273)
T d1mp8a_           2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN-CTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--   78 (273)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTT-TTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC--
T ss_pred             CCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecc-ccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe--
Confidence            456678899999999999999999987643   45788888753 234556678999999999999999999999884  


Q ss_pred             ecCCceEEEEEeccCCCCCC
Q psy360          179 LTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       179 ~~~~~~~~lv~E~~~~G~L~  198 (199)
                         .+..|+|||||++|+|.
T Consensus        79 ---~~~~~iv~E~~~~g~l~   95 (273)
T d1mp8a_          79 ---ENPVWIIMELCTLGELR   95 (273)
T ss_dssp             ---SSSCEEEEECCTTEEHH
T ss_pred             ---cCeEEEEEEeccCCcHH
Confidence               45689999999999874

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.1e-18  Score=131.65  Aligned_cols=92  Identities=30%  Similarity=0.378  Sum_probs=74.4

Q ss_pred             hhhcccccccceeecCccceeEEEEEECCCC-----cEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeee
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQTG-----VAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYW  175 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~-----~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~  175 (199)
                      |+..+++|++.+.||+|+||+||+|.+...+     ..||+|.+.... .......+.+|+.++.++ +|||||+++++|
T Consensus        32 wei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~  110 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGAC  110 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc-CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEE
Confidence            4566788999999999999999999876543     368998886432 233456789999999998 899999999998


Q ss_pred             eeeecCCceEEEEEeccCCCCCC
Q psy360          176 EVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       176 ~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      .    ..+..|||||||++|+|.
T Consensus       111 ~----~~~~~~lv~Ey~~~g~L~  129 (325)
T d1rjba_         111 T----LSGPIYLIFEYCCYGDLL  129 (325)
T ss_dssp             C----SSSSCEEEEECCTTCBHH
T ss_pred             e----eCCeEEEEEEcCCCCcHH
Confidence            7    778899999999999984

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.2e-18  Score=128.59  Aligned_cols=81  Identities=30%  Similarity=0.420  Sum_probs=65.1

Q ss_pred             eeecCccceeEEEEEEC--CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEEEEe
Q psy360          113 EEIGRGSFKTVYRGLDT--QTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      +.||+|+||+||+|.+.  .++..||+|.+..........+.+.+|+.++++++|||||+++++|.    . +..+||||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~----~-~~~~lvmE   87 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE----A-ESWMLVME   87 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE----S-SSEEEEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEec----c-CCEEEEEE
Confidence            46999999999999764  45578999998654444445678999999999999999999999885    3 45689999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      ||++|+|.
T Consensus        88 ~~~~g~L~   95 (277)
T d1xbba_          88 MAELGPLN   95 (277)
T ss_dssp             CCTTEEHH
T ss_pred             cCCCCcHH
Confidence            99999984

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.6e-18  Score=129.95  Aligned_cols=95  Identities=31%  Similarity=0.476  Sum_probs=80.6

Q ss_pred             hhhhhhcccccccceeecCccceeEEEEEECC-----CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceee
Q psy360           99 EEERESMRGYLKFEEEIGRGSFKTVYRGLDTQ-----TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYG  173 (199)
Q Consensus        99 ~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~-----~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~  173 (199)
                      ++.|+...+.+++.+.||+|+||.||+|.+..     ++..||+|.+... ........+.+|+.++++++|||||++++
T Consensus        12 ~~~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~-~~~~~~~~~~~E~~il~~l~h~nIv~~~~   90 (308)
T d1p4oa_          12 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLG   90 (308)
T ss_dssp             CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-SCHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred             ccceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcc-cChHHHHHHHHHHHHHHHcCCCCEeeeee
Confidence            34567778899999999999999999998753     3568999998643 35556677999999999999999999999


Q ss_pred             eeeeeecCCceEEEEEeccCCCCCC
Q psy360          174 YWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       174 ~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      +|.    ..+..++|||||++|+|.
T Consensus        91 ~~~----~~~~~~lv~e~~~~g~l~  111 (308)
T d1p4oa_          91 VVS----QGQPTLVIMELMTRGDLK  111 (308)
T ss_dssp             EEC----SSSSCEEEEECCTTCBHH
T ss_pred             EEe----cCCceeEEEeecCCCCHH
Confidence            987    778899999999999874

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.9e-18  Score=129.49  Aligned_cols=87  Identities=32%  Similarity=0.533  Sum_probs=71.0

Q ss_pred             cccccceeecCccceeEEEEEECCCCc--EEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCc
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGV--AVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~--~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~  183 (199)
                      ++|++.+.||+|+||.||+|.+..++.  .||+|.+... ......+.+.+|+.+++++ +|||||+++++|.    ..+
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~----~~~   84 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACE----HRG   84 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEE----ETT
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcc-cChHHHHHHHHHHHHHHhccCCCCEeeEEEEEe----cCC
Confidence            678889999999999999999887775  4677776432 2333456799999999999 6999999999998    778


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      ..+|||||++||+|.
T Consensus        85 ~~~iV~ey~~~g~L~   99 (309)
T d1fvra_          85 YLYLAIEYAPHGNLL   99 (309)
T ss_dssp             EEEEEECCCTTCBHH
T ss_pred             eeEEEEEecCCCcHH
Confidence            999999999999984

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.9e-18  Score=129.99  Aligned_cols=88  Identities=18%  Similarity=0.300  Sum_probs=73.3

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccC-HHHHHHHHHHHHHHh-cCCCCCccceeeeeeeeecCCce
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN-KAERARFREEAEMLK-GLQHPNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~~~~  184 (199)
                      ++|.+++.||+|+||+||+|.+..++..||+|.+...... ....+.+..|..++. .++|||||++++++.    .++.
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~----~~~~   77 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ----TKEN   77 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE----CSSE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEc----cCCc
Confidence            4688999999999999999999999999999999643221 112345667777665 689999999999998    7889


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .|||||||++|+|.
T Consensus        78 ~yivmEy~~~g~L~   91 (320)
T d1xjda_          78 LFFVMEYLNGGDLM   91 (320)
T ss_dssp             EEEEEECCTTCBHH
T ss_pred             eeEEEeecCCCcHH
Confidence            99999999999984

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.1e-18  Score=127.77  Aligned_cols=88  Identities=28%  Similarity=0.362  Sum_probs=71.5

Q ss_pred             hhhcccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      |+...++|++.+.||+|+||.||+|.+.  +..||+|.+....    ..+.+.+|+.++++++||||++++++|.+   .
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~~----~~~~~~~E~~~l~~l~HpnIv~~~g~~~~---~   72 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVE---E   72 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECC---C
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcHH----HHHHHHHHHHHHHhCCCCCEeeEEEEEEe---c
Confidence            4455677899999999999999999874  5689999986432    33568999999999999999999998851   3


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                      .+..||||||+++|+|.
T Consensus        73 ~~~~~lv~ey~~~g~L~   89 (262)
T d1byga_          73 KGGLYIVTEYMAKGSLV   89 (262)
T ss_dssp             --CCEEEECCCTTEEHH
T ss_pred             CCcEEEEEeccCCCCHH
Confidence            45679999999999875

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.73  E-value=3.4e-18  Score=127.73  Aligned_cols=94  Identities=28%  Similarity=0.405  Sum_probs=80.1

Q ss_pred             hhhhhcccccccceeecCccceeEEEEEECC-----CCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeee
Q psy360          100 EERESMRGYLKFEEEIGRGSFKTVYRGLDTQ-----TGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGY  174 (199)
Q Consensus       100 ~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~-----~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~  174 (199)
                      ..++..+++|++.+.||+|+||+||+|++.+     ++..||+|.+... ......+.+.+|+.++++++||||++++++
T Consensus         6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~~E~~il~~l~h~niv~~~~~   84 (301)
T d1lufa_           6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDNPNIVKLLGV   84 (301)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChh-cChHHHHHHHHHHHHHHhcCCCCcccceee
Confidence            3455667889999999999999999998653     4578999998643 355567789999999999999999999999


Q ss_pred             eeeeecCCceEEEEEeccCCCCCC
Q psy360          175 WEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       175 ~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      |.    ..+..+++|||+++|+|.
T Consensus        85 ~~----~~~~~~~v~e~~~~g~L~  104 (301)
T d1lufa_          85 CA----VGKPMCLLFEYMAYGDLN  104 (301)
T ss_dssp             EC----SSSSCEEEEECCTTCBHH
T ss_pred             ec----cCCceEEEEEecCCCcHH
Confidence            87    778899999999999874

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=5.4e-18  Score=125.55  Aligned_cols=89  Identities=29%  Similarity=0.472  Sum_probs=73.6

Q ss_pred             cccccccceeecCccceeEEEEEECCCC----cEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeec
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLT  180 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~----~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  180 (199)
                      ..+.|+..+.||+|+||.||+|.+..++    ..||+|.+... ........|.+|+.++++++|||||++++++.    
T Consensus         5 ~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~----   79 (283)
T d1mqba_           5 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS----   79 (283)
T ss_dssp             CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC----
T ss_pred             CHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcc-cChHHHHHHHHHHHHHHhcCCCCEeeeeEEEe----
Confidence            3456788899999999999999876544    47999998643 34555667999999999999999999999987    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      ..+..++|||||.+|+|.
T Consensus        80 ~~~~~~~v~e~~~~~~l~   97 (283)
T d1mqba_          80 KYKPMMIITEYMENGALD   97 (283)
T ss_dssp             SSSSEEEEEECCTTEEHH
T ss_pred             cCCceEEEEEecccCcch
Confidence            778899999999998763

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=8e-18  Score=126.21  Aligned_cols=93  Identities=27%  Similarity=0.325  Sum_probs=78.6

Q ss_pred             hhhhcccccccceeecCccceeEEEEEEC-----CCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeee
Q psy360          101 ERESMRGYLKFEEEIGRGSFKTVYRGLDT-----QTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGY  174 (199)
Q Consensus       101 ~~~~~~~~~~~~~~lG~G~fg~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~  174 (199)
                      .|+..++.|++.+.||+|+||.||+|.+.     .++..||+|.+... ........+.+|+.+++++ +|||||+++++
T Consensus        17 ~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~   95 (311)
T d1t46a_          17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHMNIVNLLGA   95 (311)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcc-cCHHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence            45667789999999999999999999753     45678999998643 3455667799999999999 69999999999


Q ss_pred             eeeeecCCceEEEEEeccCCCCCC
Q psy360          175 WEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       175 ~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      |.    ..+..+||||||++|+|.
T Consensus        96 ~~----~~~~~~lvmE~~~~g~l~  115 (311)
T d1t46a_          96 CT----IGGPTLVITEYCCYGDLL  115 (311)
T ss_dssp             EC----SSSSCEEEEECCTTEEHH
T ss_pred             Ee----eCCEEEEEEEcCCCCCHH
Confidence            87    778899999999999864

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.71  E-value=8.8e-18  Score=127.82  Aligned_cols=88  Identities=19%  Similarity=0.261  Sum_probs=76.6

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  185 (199)
                      +.|++++.||+|+||+||+|.+..++..||+|.+....... ...+.+.+|+.+++.++|||||++++++.    .....
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~----~~~~~  116 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK----DNSNL  116 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE----CSSEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccc----ccccc
Confidence            57899999999999999999999999999999986443221 23467899999999999999999999988    78889


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++||||+.+|+|.
T Consensus       117 ~~v~e~~~~g~l~  129 (350)
T d1rdqe_         117 YMVMEYVAGGEMF  129 (350)
T ss_dssp             EEEEECCTTCBHH
T ss_pred             ccccccccccchh
Confidence            9999999999874

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.71  E-value=1.3e-17  Score=127.53  Aligned_cols=88  Identities=23%  Similarity=0.283  Sum_probs=72.6

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH----HHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA----ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ++|++.+.||+|+||.||+|.+..++..||+|.+........    .......|+.+++.++|||||++++++.    ..
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~----~~   79 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH----TP   79 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE----CS
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEE----EC
Confidence            568999999999999999999999999999999865432221    1222344577888889999999999998    78


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..|||||||+||+|.
T Consensus        80 ~~~~ivmE~~~gg~L~   95 (364)
T d1omwa3          80 DKLSFILDLMNGGDLH   95 (364)
T ss_dssp             SEEEEEECCCCSCBHH
T ss_pred             CEEEEEEEecCCCcHH
Confidence            8899999999999984

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=7.6e-18  Score=127.48  Aligned_cols=86  Identities=26%  Similarity=0.280  Sum_probs=70.6

Q ss_pred             ccccccce-eecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceeeeeeeeecCCc
Q psy360          106 RGYLKFEE-EIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       106 ~~~~~~~~-~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~  183 (199)
                      .++|++.. .||+|+||+||+|.+..++..||+|.+...       ..+.+|+.++.++ +|||||+++++|.+....+.
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~   82 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK   82 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCC
Confidence            35677764 699999999999999999999999998532       3467899887654 89999999998874334467


Q ss_pred             eEEEEEeccCCCCCC
Q psy360          184 YIVLVTELMTSGTLK  198 (199)
Q Consensus       184 ~~~lv~E~~~~G~L~  198 (199)
                      .+|||||||+||+|.
T Consensus        83 ~~~ivmEy~~gg~L~   97 (335)
T d2ozaa1          83 CLLIVMECLDGGELF   97 (335)
T ss_dssp             EEEEEEECCCSEEHH
T ss_pred             EEEEEEECCCCCcHH
Confidence            899999999999984

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2e-17  Score=123.97  Aligned_cols=84  Identities=30%  Similarity=0.461  Sum_probs=69.3

Q ss_pred             cceeecCccceeEEEEEECCC---CcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          111 FEEEIGRGSFKTVYRGLDTQT---GVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       111 ~~~~lG~G~fg~v~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      +.+.||+|+||+||+|.+..+   ...||+|.+.. .......+.|.+|+.++++++||||+++++++..   .+...++
T Consensus        31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~-~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~---~~~~~~l  106 (311)
T d1r0pa_          31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR---SEGSPLV  106 (311)
T ss_dssp             EEEEEEEETTEEEEEEEECC----CEEEEEEEECC-CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEE---TTTEEEE
T ss_pred             cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECc-ccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEe---cCCceEE
Confidence            357899999999999987553   34689999863 3355567889999999999999999999998752   4568899


Q ss_pred             EEeccCCCCCC
Q psy360          188 VTELMTSGTLK  198 (199)
Q Consensus       188 v~E~~~~G~L~  198 (199)
                      |||||++|+|.
T Consensus       107 v~E~~~~g~l~  117 (311)
T d1r0pa_         107 VLPYMKHGDLR  117 (311)
T ss_dssp             EEECCTTCBHH
T ss_pred             EEEEeecCchh
Confidence            99999999874

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.6e-17  Score=126.67  Aligned_cols=91  Identities=23%  Similarity=0.234  Sum_probs=76.0

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee--cCCce
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL--TKRKY  184 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~~~  184 (199)
                      +.|++++.||+|+||+||+|.+..++..||+|.+..........+.+.+|+.++++++|||||+++++|....  .....
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            5699999999999999999999999999999999866666666778999999999999999999999885211  13468


Q ss_pred             EEEEEeccCCCCC
Q psy360          185 IVLVTELMTSGTL  197 (199)
Q Consensus       185 ~~lv~E~~~~G~L  197 (199)
                      .|+|||||.+|.|
T Consensus        97 ~~iv~Ey~~~~l~  109 (355)
T d2b1pa1          97 VYLVMELMDANLC  109 (355)
T ss_dssp             EEEEEECCSEEHH
T ss_pred             eEEEEeccchHHH
Confidence            9999999987654

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=6.7e-18  Score=125.94  Aligned_cols=83  Identities=27%  Similarity=0.383  Sum_probs=67.2

Q ss_pred             cceeecCccceeEEEEEECCCCcEEEEEEecccccCHH---HHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEEE
Q psy360          111 FEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA---ERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       111 ~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      .++.||+|+||+||+|.+..++..||+|.+........   ..+.+.+|+.++++++|||||++++++.    .++..||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~----~~~~~~i   77 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFG----HKSNISL   77 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEEC----CTTCCEE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeec----cCCceee
Confidence            35789999999999999999999999999865432221   2356889999999999999999999998    7788999


Q ss_pred             EEeccCCCCC
Q psy360          188 VTELMTSGTL  197 (199)
Q Consensus       188 v~E~~~~G~L  197 (199)
                      |||||.+|++
T Consensus        78 vmE~~~~~~~   87 (299)
T d1ua2a_          78 VFDFMETDLE   87 (299)
T ss_dssp             EEECCSEEHH
T ss_pred             hhhhhcchHH
Confidence            9999998754

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2.4e-17  Score=122.34  Aligned_cols=87  Identities=24%  Similarity=0.278  Sum_probs=77.7

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ++|++++.||+|+||+||+|.+..++..||+|.+............+.+|+.+++.++||||++++++|.    .....+
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~----~~~~~~   77 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH----SDKKLT   77 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE----CSSEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccc----ccccee
Confidence            4689999999999999999999999999999999755544556678999999999999999999999998    788999


Q ss_pred             EEEeccCCCCC
Q psy360          187 LVTELMTSGTL  197 (199)
Q Consensus       187 lv~E~~~~G~L  197 (199)
                      +||||+.+++|
T Consensus        78 iv~~~~~~~~l   88 (292)
T d1unla_          78 LVFEFCDQDLK   88 (292)
T ss_dssp             EEEECCSEEHH
T ss_pred             EEeeecccccc
Confidence            99999988765

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.2e-17  Score=122.24  Aligned_cols=92  Identities=23%  Similarity=0.328  Sum_probs=71.8

Q ss_pred             hhhcccccccceeecCccceeEEEEEECCCC-------cEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccceee
Q psy360          102 RESMRGYLKFEEEIGRGSFKTVYRGLDTQTG-------VAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSFYG  173 (199)
Q Consensus       102 ~~~~~~~~~~~~~lG~G~fg~v~~~~~~~~~-------~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~  173 (199)
                      |+...+.|.+++.||+|+||.||+|++..++       ..||+|.+... ........+.+|...+.++ +|||||++++
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~   86 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLG   86 (299)
T ss_dssp             TBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcc-cChHHHHHHHHHHHHHHHhcCCCeEEeccc
Confidence            5567789999999999999999999865443       47999998643 3555567788999998888 7999999999


Q ss_pred             eeeeeecCCceEEEEEeccCCCCCC
Q psy360          174 YWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       174 ~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      +|.    +++..++|||||++|+|.
T Consensus        87 ~~~----~~~~~~~v~e~~~~g~l~  107 (299)
T d1fgka_          87 ACT----QDGPLYVIVEYASKGNLR  107 (299)
T ss_dssp             EEC----SSSSCEEEECCCTTCBHH
T ss_pred             ccc----cCCeEEEEEEccCCCcHH
Confidence            997    778899999999999874

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.67  E-value=1.7e-17  Score=123.01  Aligned_cols=86  Identities=27%  Similarity=0.375  Sum_probs=73.6

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      ++|++.+.||+|+||+||+|.+. ++..||+|.+..........+.+.+|+.++++++|||||++++++.    ..+..+
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~----~~~~~~   76 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH----TKKRLV   76 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE----CSSCEE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecc----cCCcee
Confidence            46889999999999999999975 7789999999654433333567999999999999999999999998    788899


Q ss_pred             EEEeccCCCCC
Q psy360          187 LVTELMTSGTL  197 (199)
Q Consensus       187 lv~E~~~~G~L  197 (199)
                      ++|||+.++.|
T Consensus        77 i~~e~~~~~~~   87 (286)
T d1ob3a_          77 LVFEHLDQDLK   87 (286)
T ss_dssp             EEEECCSEEHH
T ss_pred             EEEEeehhhhH
Confidence            99999987754

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=3.2e-17  Score=120.67  Aligned_cols=88  Identities=31%  Similarity=0.408  Sum_probs=63.3

Q ss_pred             ccccccceeecCccceeEEEEEECCC---CcEEEEEEecccccCH-HHHHHHHHHHHHHhcCCCCCccceeeeeeeeecC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQT---GVAVAWCELQEKKLNK-AERARFREEAEMLKGLQHPNIVSFYGYWEVTLTK  181 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~---~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  181 (199)
                      .++|++.+.||+|+||.||+|.+...   ...||+|.+....... ...+.|.+|+.++++++||||++++++|.    +
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~----~   82 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL----T   82 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEEC----S
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe----e
Confidence            35689999999999999999976432   3468999886543322 34567999999999999999999999885    3


Q ss_pred             CceEEEEEeccCCCCCC
Q psy360          182 RKYIVLVTELMTSGTLK  198 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L~  198 (199)
                       +..++|||||++|+|.
T Consensus        83 -~~~~lv~e~~~~~~l~   98 (273)
T d1u46a_          83 -PPMKMVTELAPLGSLL   98 (273)
T ss_dssp             -SSCEEEEECCTTCBHH
T ss_pred             -cchheeeeeecCcchh
Confidence             4668999999999864

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=4.4e-17  Score=123.83  Aligned_cols=89  Identities=21%  Similarity=0.290  Sum_probs=69.3

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee--cCC
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL--TKR  182 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~  182 (199)
                      ..++|++++.||+|+||+||+|.+..++..||+|.+..........+.+.+|+.+|++++|||||+++++|....  ...
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~   95 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF   95 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence            457899999999999999999999999999999999766556667788999999999999999999999886211  122


Q ss_pred             ceEEEEEeccC
Q psy360          183 KYIVLVTELMT  193 (199)
Q Consensus       183 ~~~~lv~E~~~  193 (199)
                      ...|||||||.
T Consensus        96 ~~~~lv~e~~~  106 (346)
T d1cm8a_          96 TDFYLVMPFMG  106 (346)
T ss_dssp             CCCEEEEECCS
T ss_pred             ceEEEEEeccc
Confidence            35799999993

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.65  E-value=1.3e-16  Score=120.30  Aligned_cols=85  Identities=20%  Similarity=0.360  Sum_probs=73.1

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeeeeeeeecCCceE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLTKRKYI  185 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~  185 (199)
                      ++|++++.||+|+||+||+|++..++..||+|.+....     .+.+.+|+.+|++++ ||||+++++++..  ......
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-----~~~~~~Ei~il~~l~~hpnIv~~~~~~~~--~~~~~~  107 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKD--PVSRTP  107 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEEC--TTTCSE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH-----HHHHHHHHHHHHhccCCCCCcEEEEEEEe--cCCCce
Confidence            57999999999999999999999999999999986431     345889999999995 9999999998862  134678


Q ss_pred             EEEEeccCCCCCC
Q psy360          186 VLVTELMTSGTLK  198 (199)
Q Consensus       186 ~lv~E~~~~G~L~  198 (199)
                      ++|||||.+|+|.
T Consensus       108 ~~v~e~~~~~~L~  120 (328)
T d3bqca1         108 ALVFEHVNNTDFK  120 (328)
T ss_dssp             EEEEECCCSCBGG
T ss_pred             eEEEeecCCCcHH
Confidence            9999999999875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.3e-16  Score=119.82  Aligned_cols=86  Identities=29%  Similarity=0.426  Sum_probs=67.0

Q ss_pred             cccccceeecCccceeEEEEEECCCCc----EEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCC
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGV----AVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKR  182 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~----~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  182 (199)
                      ..|++++.||+|+||+||+|.+..++.    .||+|.+... ......+.+.+|+.++++++|||||+++++|.    + 
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~----~-   82 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICL----T-   82 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-----CTHHHHHHHHHHHHHCCCTTBCCEEEEEE----S-
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe----c-
Confidence            358999999999999999999887765    4788877532 22234567999999999999999999999986    3 


Q ss_pred             ceEEEEEeccCCCCCC
Q psy360          183 KYIVLVTELMTSGTLK  198 (199)
Q Consensus       183 ~~~~lv~E~~~~G~L~  198 (199)
                      +..+++|||+.+|+|.
T Consensus        83 ~~~~~v~e~~~~~~l~   98 (317)
T d1xkka_          83 STVQLITQLMPFGCLL   98 (317)
T ss_dssp             SSEEEEEECCTTCBHH
T ss_pred             CCeeEEEEeccCCccc
Confidence            4568889999999874

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.2e-16  Score=117.78  Aligned_cols=87  Identities=24%  Similarity=0.254  Sum_probs=66.6

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.+.+.+.||+|+||.||+|++  ++..||+|.+....   ........|+..+.+++|||||+++++|.+........|
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~   77 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEE
Confidence            4677889999999999999986  56799999986432   122223346666678899999999999874333335789


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      ||||||++|+|.
T Consensus        78 lv~Ey~~~g~L~   89 (303)
T d1vjya_          78 LVSDYHEHGSLF   89 (303)
T ss_dssp             EEEECCTTCBHH
T ss_pred             EEEecccCCCHH
Confidence            999999999985

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.6e-16  Score=120.76  Aligned_cols=93  Identities=19%  Similarity=0.264  Sum_probs=76.4

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee-cCCce
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL-TKRKY  184 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~  184 (199)
                      .++|++++.||+|+||+||+|.+..++..||+|.+..........+.+.+|+.++++++|||||++++++.... .....
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            45689999999999999999999999999999999866556666778999999999999999999999875211 12234


Q ss_pred             EEEEEeccCCCCCC
Q psy360          185 IVLVTELMTSGTLK  198 (199)
Q Consensus       185 ~~lv~E~~~~G~L~  198 (199)
                      .+++|||+.+|+|.
T Consensus        97 ~~~i~~~~~gg~L~  110 (348)
T d2gfsa1          97 DVYLVTHLMGADLN  110 (348)
T ss_dssp             CCEEEEECCSEEHH
T ss_pred             eEEEEEeecCCchh
Confidence            46667788899874

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.5e-16  Score=119.61  Aligned_cols=91  Identities=18%  Similarity=0.179  Sum_probs=68.6

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      .+|++++.||+|+||+||+|.+..++..||+|.+.... .....+.+.+|+.+|++++||||+++++++..........+
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc-ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            46899999999999999999999999999999996432 44556789999999999999999999998862211122234


Q ss_pred             EEEeccCCCCCC
Q psy360          187 LVTELMTSGTLK  198 (199)
Q Consensus       187 lv~E~~~~G~L~  198 (199)
                      ++|+|+.+|+|.
T Consensus        87 ~l~~~~~~g~L~   98 (345)
T d1pmea_          87 YLVTHLMGADLY   98 (345)
T ss_dssp             EEEEECCCEEHH
T ss_pred             EEEEeecCCchh
Confidence            445567788874

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.5e-16  Score=119.52  Aligned_cols=92  Identities=20%  Similarity=0.235  Sum_probs=71.3

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee----cC
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL----TK  181 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~  181 (199)
                      .++|++.+.||+|+||+||+|.+..++..||+|.+............+.+|+.++++++|+||+++++++....    ..
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            36789999999999999999999999999999998655444334566889999999999999999999875211    12


Q ss_pred             CceEEEEEeccCCCCC
Q psy360          182 RKYIVLVTELMTSGTL  197 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L  197 (199)
                      .+..|+|||||.+|.+
T Consensus        89 ~~~~~iv~e~~~~~~~  104 (318)
T d3blha1          89 KGSIYLVFDFCEHDLA  104 (318)
T ss_dssp             --CEEEEEECCCEEHH
T ss_pred             CceEEEEEeccCCCcc
Confidence            4568999999987654

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.3e-16  Score=117.46  Aligned_cols=86  Identities=19%  Similarity=0.369  Sum_probs=71.8

Q ss_pred             ccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHH----HHHHHHHHHHHHhcCC--CCCccceeeeeeeee
Q psy360          106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKA----ERARFREEAEMLKGLQ--HPNIVSFYGYWEVTL  179 (199)
Q Consensus       106 ~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~----~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~  179 (199)
                      .+.|++.+.||+|+||.||+|.+..++..||+|.+........    ....+.+|+.++++++  |||||++++++.   
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~---   79 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE---   79 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE---
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEe---
Confidence            3568999999999999999999999999999999875433211    1233678999999986  899999999998   


Q ss_pred             cCCceEEEEEeccCCC
Q psy360          180 TKRKYIVLVTELMTSG  195 (199)
Q Consensus       180 ~~~~~~~lv~E~~~~G  195 (199)
                       ..+..|+||||+.++
T Consensus        80 -~~~~~~lv~e~~~~~   94 (273)
T d1xwsa_          80 -RPDSFVLILERPEPV   94 (273)
T ss_dssp             -CSSEEEEEEECCSSE
T ss_pred             -eCCeEEEEEEeccCc
Confidence             788999999999864

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=9.1e-16  Score=114.23  Aligned_cols=97  Identities=25%  Similarity=0.312  Sum_probs=75.0

Q ss_pred             hhhhhhhcccccccceeecCccceeEEEEEECC-----CCcEEEEEEecccccCHHHHHHHHHHHHHHhcC-CCCCccce
Q psy360           98 KEEERESMRGYLKFEEEIGRGSFKTVYRGLDTQ-----TGVAVAWCELQEKKLNKAERARFREEAEMLKGL-QHPNIVSF  171 (199)
Q Consensus        98 ~~~~~~~~~~~~~~~~~lG~G~fg~v~~~~~~~-----~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l  171 (199)
                      +...|+..++.|++.+.||+|+||+||+|.+..     +++.||+|.+... ......+.+.+|..++.++ +|+||+.+
T Consensus         4 ~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~~~~e~~~l~~~~~h~~iv~~   82 (299)
T d1ywna1           4 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNL   82 (299)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC-----CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccc-cCcHHHHHHHHHHHHHHhhcCCCeEEEe
Confidence            345666777899999999999999999998654     3468999998643 3444566788888888777 68999999


Q ss_pred             eeeeeeeecCCceEEEEEeccCCCCCC
Q psy360          172 YGYWEVTLTKRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       172 ~~~~~~~~~~~~~~~lv~E~~~~G~L~  198 (199)
                      ++++..   .+...++|||||++|+|.
T Consensus        83 ~~~~~~---~~~~~~iv~E~~~~g~L~  106 (299)
T d1ywna1          83 LGACTK---PGGPLMVIVEFCKFGNLS  106 (299)
T ss_dssp             EEEECS---TTSCCEEEEECCTTCBHH
T ss_pred             eeeecc---CCCeEEEEEEecCCCcHH
Confidence            997752   456789999999999984

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=1.2e-15  Score=116.03  Aligned_cols=83  Identities=24%  Similarity=0.308  Sum_probs=68.1

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeee--cCCceE
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTL--TKRKYI  185 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~~~~  185 (199)
                      .|+..+.||+|+||+||+|.+..++..||+|.+.....      ...+|+.++++++|+||++++++|....  ....++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~------~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~   94 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL   94 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch------HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEE
Confidence            57888999999999999999999999999999865431      2347999999999999999999885322  134568


Q ss_pred             EEEEeccCCCC
Q psy360          186 VLVTELMTSGT  196 (199)
Q Consensus       186 ~lv~E~~~~G~  196 (199)
                      |||||||++|.
T Consensus        95 ~lv~Ey~~~~~  105 (350)
T d1q5ka_          95 NLVLDYVPETV  105 (350)
T ss_dssp             EEEEECCSEEH
T ss_pred             EEEEeccCCcc
Confidence            99999998763

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.9e-16  Score=119.05  Aligned_cols=88  Identities=17%  Similarity=0.298  Sum_probs=73.3

Q ss_pred             cccccceeecCccceeEEEEEE---CCCCcEEEEEEecccccC--HHHHHHHHHHHHHHhcCCC-CCccceeeeeeeeec
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLD---TQTGVAVAWCELQEKKLN--KAERARFREEAEMLKGLQH-PNIVSFYGYWEVTLT  180 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~---~~~~~~~a~k~~~~~~~~--~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~  180 (199)
                      ++|++++.||+|+||+||+|.+   ..++..||+|.+......  ....+.+.+|+.++++++| |||+++++++.    
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~----   99 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ----   99 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE----
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeec----
Confidence            6799999999999999999986   346889999998654321  1123558899999999966 89999999987    


Q ss_pred             CCceEEEEEeccCCCCCC
Q psy360          181 KRKYIVLVTELMTSGTLK  198 (199)
Q Consensus       181 ~~~~~~lv~E~~~~G~L~  198 (199)
                      .....+++|||+.+|+|.
T Consensus       100 ~~~~~~~v~e~~~~~~L~  117 (322)
T d1vzoa_         100 TETKLHLILDYINGGELF  117 (322)
T ss_dssp             ETTEEEEEECCCCSCBHH
T ss_pred             cCCceeeeeecccccHHH
Confidence            678999999999999984

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=6.5e-16  Score=115.30  Aligned_cols=91  Identities=22%  Similarity=0.341  Sum_probs=69.3

Q ss_pred             cccccceeecCccceeEEEEEECCC-CcEEEEEEecccccCHHHHHHHHHHHHHHhcC---CCCCccceeeeeeeee-cC
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQT-GVAVAWCELQEKKLNKAERARFREEAEMLKGL---QHPNIVSFYGYWEVTL-TK  181 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~-~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~-~~  181 (199)
                      ++|++++.||+|+||+||+|.+..+ +..||+|.+............+.+|+.+++.|   +||||++++++|.... ..
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~   86 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   86 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence            5789999999999999999998765 66799999865433332233466777776655   7999999999885322 23


Q ss_pred             CceEEEEEeccCCCCC
Q psy360          182 RKYIVLVTELMTSGTL  197 (199)
Q Consensus       182 ~~~~~lv~E~~~~G~L  197 (199)
                      ....+++||||++|++
T Consensus        87 ~~~~~~~~e~~~~~~~  102 (305)
T d1blxa_          87 ETKLTLVFEHVDQDLT  102 (305)
T ss_dssp             EEEEEEEEECCSCBHH
T ss_pred             CceEEEEEEeccCCch
Confidence            4678999999998854

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.7e-15  Score=111.14  Aligned_cols=59  Identities=73%  Similarity=1.192  Sum_probs=49.9

Q ss_pred             eeeeccCCCcccccccccccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            8 VNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      .....+||+.|||||++.+.++.++|||||||++|+|++|+.||....+....+..+..
T Consensus       169 ~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~  227 (270)
T d1t4ha_         169 FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS  227 (270)
T ss_dssp             SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT
T ss_pred             ccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHc
Confidence            34567999999999999888999999999999999999999999876666665555443

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.49  E-value=2.8e-14  Score=105.80  Aligned_cols=84  Identities=24%  Similarity=0.281  Sum_probs=70.0

Q ss_pred             cccccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCC-CCccceeeeeeeeecCCc
Q psy360          105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQH-PNIVSFYGYWEVTLTKRK  183 (199)
Q Consensus       105 ~~~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~~  183 (199)
                      ..++|++.+.||+|+||+||+|.+..++..+|+|.+.....    ...+.+|++.+..+.| +|++.+++++.    ...
T Consensus         3 ig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~----~~~   74 (293)
T d1csna_           3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQ----EGL   74 (293)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEE----ETT
T ss_pred             CCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC----cHHHHHHHHHHHHhcCCCCCCEEEEEee----cCC
Confidence            34678999999999999999999999999999998754321    2346788999999975 89999999887    678


Q ss_pred             eEEEEEeccCCCCC
Q psy360          184 YIVLVTELMTSGTL  197 (199)
Q Consensus       184 ~~~lv~E~~~~G~L  197 (199)
                      ..++||||+ +|+|
T Consensus        75 ~~~~vme~~-~~~l   87 (293)
T d1csna_          75 HNVLVIDLL-GPSL   87 (293)
T ss_dssp             EEEEEEECC-CCBH
T ss_pred             ccEEEEEec-CCCH
Confidence            889999999 5665

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=8.3e-15  Score=107.35  Aligned_cols=59  Identities=20%  Similarity=0.390  Sum_probs=44.4

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      .....+||+.|||||++. ..++.++|||||||++|||++|+.||.. .+..+....+...
T Consensus       170 ~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~-~~~~~~~~~i~~~  229 (269)
T d2java1         170 FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA-FSQKELAGKIREG  229 (269)
T ss_dssp             ------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC-SSHHHHHHHHHHT
T ss_pred             ccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCC-CCHHHHHHHHHcC
Confidence            345679999999999886 5699999999999999999999999976 4555555555543

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=6.2e-15  Score=109.02  Aligned_cols=59  Identities=17%  Similarity=0.349  Sum_probs=47.4

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhc
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      ....+||+.|||||++. ..++.++|+|||||++|+|++|+.||.. .+....+..+....
T Consensus       167 ~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~-~~~~~~~~~i~~~~  226 (288)
T d1uu3a_         167 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLE  226 (288)
T ss_dssp             ---CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHTTC
T ss_pred             cccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCC-cCHHHHHHHHHcCC
Confidence            34578999999999887 5699999999999999999999999976 45556666666544

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=8.5e-15  Score=106.94  Aligned_cols=58  Identities=26%  Similarity=0.447  Sum_probs=47.9

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      ....+||+.|||||++. ..++.++|+|||||++|+|++|+.||.. .+..+.+..+...
T Consensus       161 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~-~~~~~~~~~i~~~  219 (263)
T d2j4za1         161 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRV  219 (263)
T ss_dssp             CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC-SSHHHHHHHHHTT
T ss_pred             ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCC-CCHHHHHHHHHcC
Confidence            45679999999999887 4589999999999999999999999976 4555566655543

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.47  E-value=1.1e-14  Score=108.74  Aligned_cols=61  Identities=20%  Similarity=0.447  Sum_probs=43.4

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhcc
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI   69 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~   69 (199)
                      .....+||+.|||||++. +.++.++|+|||||++|+|++|+.||.. .........+.....
T Consensus       165 ~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~-~~~~~~~~~i~~~~~  226 (307)
T d1a06a_         165 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD-ENDAKLFEQILKAEY  226 (307)
T ss_dssp             --------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC-SSHHHHHHHHHTTCC
T ss_pred             eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCC-CCHHHHHHHHhccCC
Confidence            345678999999999887 5699999999999999999999999976 344455555655443

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=2.5e-14  Score=107.91  Aligned_cols=61  Identities=26%  Similarity=0.532  Sum_probs=50.0

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhcc
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI   69 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~   69 (199)
                      .....+||+.|||||++. ..++.++|+||+||++|||++|+.||.. .+..+.+..+.....
T Consensus       161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~-~~~~~~~~~i~~~~~  222 (337)
T d1o6la_         161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELILMEEI  222 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCCC
T ss_pred             ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCC-cCHHHHHHHHhcCCC
Confidence            445679999999999887 5699999999999999999999999976 455566666665443

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.5e-14  Score=106.35  Aligned_cols=55  Identities=31%  Similarity=0.450  Sum_probs=42.7

Q ss_pred             eeeeccCCCccccccccc----ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHH
Q psy360            8 VNIRTQRTPEFMAPEMYE----EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYK   62 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~----~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~   62 (199)
                      ...+.+||+.|||||++.    +.++.++|||||||++|||++|+.||....+......
T Consensus       162 ~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~  220 (276)
T d1uwha_         162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF  220 (276)
T ss_dssp             ----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH
T ss_pred             cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHH
Confidence            345678999999999874    3489999999999999999999999987555544433

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.45  E-value=9.8e-14  Score=103.03  Aligned_cols=82  Identities=24%  Similarity=0.318  Sum_probs=65.8

Q ss_pred             cccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCCCCccceeeeeeeeecCCceEE
Q psy360          107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQHPNIVSFYGYWEVTLTKRKYIV  186 (199)
Q Consensus       107 ~~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  186 (199)
                      +.|++.+.||+|+||.||+|.+..++..||+|.+.....    .+.+..|+.+++.++|+|++.++..+..   ..+..+
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~i~~~l~~~~~i~~~~~~~~---~~~~~~   79 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGA---EGDYNV   79 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT----SCCHHHHHHHHHHSTTSTTCCCEEEEEE---ETTEEE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc----CHHHHHHHHHHHHccCCCcccEEEEEEe---cCCEEE
Confidence            468999999999999999999999999999998764322    2347889999999988776665554431   678889


Q ss_pred             EEEeccCCC
Q psy360          187 LVTELMTSG  195 (199)
Q Consensus       187 lv~E~~~~G  195 (199)
                      +||||+.++
T Consensus        80 ivme~~~~~   88 (299)
T d1ckia_          80 MVMELLGPS   88 (299)
T ss_dssp             EEEECCCCB
T ss_pred             EEEEEcCCc
Confidence            999999654

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.44  E-value=2.8e-14  Score=106.85  Aligned_cols=60  Identities=25%  Similarity=0.600  Sum_probs=48.9

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhcc
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI   69 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~   69 (199)
                      ....+||+.|||||++. ..++.++|+|||||++|+|++|+.||.. .+..+.+..+.....
T Consensus       158 ~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~-~~~~~~~~~i~~~~~  218 (316)
T d1fota_         158 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD-SNTMKTYEKILNAEL  218 (316)
T ss_dssp             BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC-SSHHHHHHHHHHCCC
T ss_pred             cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCC-cCHHHHHHHHHcCCC
Confidence            34679999999999887 4599999999999999999999999976 455556666665443

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.5e-14  Score=105.99  Aligned_cols=55  Identities=25%  Similarity=0.454  Sum_probs=43.6

Q ss_pred             eeeccCCCccccccccc-ccC-CCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHH
Q psy360            9 NIRTQRTPEFMAPEMYE-EHY-DESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKK   63 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~-~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~   63 (199)
                      .+..+||+.|||||++. ..+ +.++|+|||||++|+|++|+.||.........+..
T Consensus       162 ~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~  218 (271)
T d1nvra_         162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD  218 (271)
T ss_dssp             BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHH
T ss_pred             ccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            44679999999999886 444 67899999999999999999999765444333333

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=3.4e-14  Score=105.20  Aligned_cols=49  Identities=31%  Similarity=0.531  Sum_probs=42.3

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      .....+||+.|||||++. +.++.++|+|||||++|+|++|+.||.....
T Consensus       172 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~  221 (293)
T d1yhwa1         172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP  221 (293)
T ss_dssp             CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             cccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCH
Confidence            344668999999999887 5699999999999999999999999976433

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=3.7e-15  Score=112.11  Aligned_cols=58  Identities=21%  Similarity=0.310  Sum_probs=45.5

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHHhhc
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      .+.+||+.|||||++. +.++.++|||||||++|||++ |+.||...... ..+..++...
T Consensus       224 ~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~-~~~~~~~~~~  283 (325)
T d1rjba_         224 GNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD-ANFYKLIQNG  283 (325)
T ss_dssp             TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHHHHHTT
T ss_pred             ccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHH-HHHHHHHhcC
Confidence            3567899999999876 779999999999999999998 89999764443 3344444443

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=7.4e-14  Score=103.95  Aligned_cols=58  Identities=19%  Similarity=0.243  Sum_probs=46.7

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      .....+||+.|||||++. ..++.++|+||+||++|||++|+.||... +....+..+..
T Consensus       171 ~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~-~~~~~~~~i~~  229 (305)
T d1blxa_         171 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS-SDVDQLGKILD  229 (305)
T ss_dssp             GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHH
T ss_pred             cCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCC-CHHHHHHHHHH
Confidence            345679999999999876 67999999999999999999999999764 44444444443

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=7.8e-14  Score=104.52  Aligned_cols=58  Identities=24%  Similarity=0.509  Sum_probs=48.1

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      .+..+||+.|+|||++. +.++.++|+|||||++|+|++|+.||.. .+..+.+..+...
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~-~~~~~~~~~i~~~  218 (320)
T d1xjda_         160 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG-QDEEELFHSIRMD  218 (320)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHC
T ss_pred             ccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCC-CCHHHHHHHHHcC
Confidence            44579999999999887 5799999999999999999999999976 4555666665544

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.40  E-value=4.7e-14  Score=103.70  Aligned_cols=57  Identities=25%  Similarity=0.439  Sum_probs=39.7

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ....+||+.|||||++. +.++.++|+|||||++|+|++|+.||... +..+.+..++.
T Consensus       171 ~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~-~~~~~~~~~~~  228 (277)
T d1o6ya_         171 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD-SPVSVAYQHVR  228 (277)
T ss_dssp             --------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHH
T ss_pred             cccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCc-CHHHHHHHHHh
Confidence            34568999999999887 56999999999999999999999999763 44444444443

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=9.4e-14  Score=102.88  Aligned_cols=60  Identities=22%  Similarity=0.336  Sum_probs=48.3

Q ss_pred             eeeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360            7 YVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus         7 ~~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      ......+||+.|||||++. +.++.++|||||||++|+|++|+.||.. .+..+.+..+...
T Consensus       171 ~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~-~~~~~~~~~i~~~  231 (293)
T d1jksa_         171 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAV  231 (293)
T ss_dssp             CBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHTT
T ss_pred             ccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCC-CCHHHHHHHHHhc
Confidence            3445678999999999887 5699999999999999999999999976 4455555555543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=6.1e-14  Score=105.24  Aligned_cols=47  Identities=26%  Similarity=0.506  Sum_probs=40.2

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      .+.+||+.|||||++. ..++.++|+||+||+++||++|+.||.....
T Consensus       161 ~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~  208 (322)
T d1s9ja_         161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA  208 (322)
T ss_dssp             ---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCT
T ss_pred             ccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence            4679999999999887 5799999999999999999999999987543

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.38  E-value=8.4e-14  Score=105.59  Aligned_cols=58  Identities=36%  Similarity=0.577  Sum_probs=47.6

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhc
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS   68 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~   68 (199)
                      ...+||+.|||||++. ..++.++|+|||||++|+|++|+.||.. .+....+..+....
T Consensus       196 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~-~~~~~~~~~i~~~~  254 (350)
T d1rdqe_         196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGK  254 (350)
T ss_dssp             CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCC
T ss_pred             ccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCC-cCHHHHHHHHhcCC
Confidence            4578999999999887 5699999999999999999999999976 45555556555543

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.38  E-value=1.3e-13  Score=102.83  Aligned_cols=56  Identities=25%  Similarity=0.456  Sum_probs=44.5

Q ss_pred             eeccCCCccccccccc----ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYE----EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~----~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...+||+.|||||++.    +.++.++|||||||++|||++|+.||... +..+.+..+..
T Consensus       169 ~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~-~~~~~~~~i~~  228 (309)
T d1u5ra_         169 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQ  228 (309)
T ss_dssp             CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-CHHHHHHHHHH
T ss_pred             CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCC-CHHHHHHHHHh
Confidence            4568999999999874    35899999999999999999999999764 33344444444

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.2e-13  Score=102.08  Aligned_cols=57  Identities=32%  Similarity=0.505  Sum_probs=45.5

Q ss_pred             eeccCCCccccccccc------ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360           10 IRTQRTPEFMAPEMYE------EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~------~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      ...+||+.|||||++.      +.++.++|||||||++|+|++|+.||... +..+.+..+...
T Consensus       168 ~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~-~~~~~~~~i~~~  230 (288)
T d2jfla1         168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKS  230 (288)
T ss_dssp             TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTS-CGGGHHHHHHHS
T ss_pred             cccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCC-CHHHHHHHHHcC
Confidence            3578999999999773      34889999999999999999999999764 444555555543

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.36  E-value=1.5e-13  Score=104.18  Aligned_cols=61  Identities=21%  Similarity=0.233  Sum_probs=49.6

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhcc
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI   69 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~   69 (199)
                      .....+||+.|||||++. ..++.++|+|||||++|+|++|+.||.. .+..+.+..+.....
T Consensus       181 ~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~-~~~~~~~~~i~~~~~  242 (350)
T d1koaa2         181 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG-ENDDETLRNVKSCDW  242 (350)
T ss_dssp             CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHTCC
T ss_pred             ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCC-CCHHHHHHHHHhCCC
Confidence            344679999999999887 5699999999999999999999999975 455566666665443

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=1.5e-13  Score=100.71  Aligned_cols=58  Identities=16%  Similarity=0.251  Sum_probs=46.6

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      .....||+.|||||++. +.++.++|||||||++|||+||..|+....+..+....+..
T Consensus       167 ~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~  225 (272)
T d1qpca_         167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER  225 (272)
T ss_dssp             CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT
T ss_pred             ccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence            34568999999999887 67999999999999999999977777665666665555443

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=1.8e-13  Score=99.75  Aligned_cols=56  Identities=20%  Similarity=0.386  Sum_probs=41.9

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...||+.|||||++. +.++.++|||||||++|||+++..|+....+..+....+..
T Consensus       161 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~  217 (263)
T d1sm2a_         161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST  217 (263)
T ss_dssp             ----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHH
T ss_pred             ceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHh
Confidence            468899999999887 67999999999999999999965666555666566555544

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.3e-13  Score=100.29  Aligned_cols=56  Identities=20%  Similarity=0.282  Sum_probs=44.1

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~   65 (199)
                      ....||+.|||||++. +.++.++|||||||++|||++|..|+....+..+.+..+.
T Consensus       171 ~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~  227 (283)
T d1mqba_         171 SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN  227 (283)
T ss_dssp             ---CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH
T ss_pred             ccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHh
Confidence            3457899999999876 6799999999999999999997777766666666655444

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=1.5e-14  Score=106.22  Aligned_cols=57  Identities=23%  Similarity=0.426  Sum_probs=43.6

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHHhh
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      ....||..|+|||.+. +.++.++|||||||++|||++ |+.||.. .+..+....+...
T Consensus       172 ~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~-~~~~~~~~~i~~~  230 (273)
T d1u46a_         172 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG-LNGSQILHKIDKE  230 (273)
T ss_dssp             ----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT-CCHHHHHHHHHTS
T ss_pred             CccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCC-cCHHHHHHHHHhC
Confidence            3557888999999887 679999999999999999998 8999976 4555555555544

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.1e-13  Score=104.26  Aligned_cols=46  Identities=28%  Similarity=0.498  Sum_probs=41.3

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ....+||+.|||||++. ..++.++|+|||||++|+|++|+.||...
T Consensus       170 ~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~  216 (335)
T d2ozaa1         170 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN  216 (335)
T ss_dssp             CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEET
T ss_pred             cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCC
Confidence            44678999999999887 46999999999999999999999999754

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.7e-14  Score=107.25  Aligned_cols=52  Identities=23%  Similarity=0.326  Sum_probs=41.1

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCC-CCCCCCCChhHH
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSE-YPYMECIGPAQI   60 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~-~p~~~~~~~~~~   60 (199)
                      ....+||+.|||||++. +.++.++|||||||++|||++|. .||.........
T Consensus       193 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~  246 (299)
T d1ywna1         193 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF  246 (299)
T ss_dssp             TTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH
T ss_pred             cCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            34568999999999886 67999999999999999999865 566554444333

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=2.5e-13  Score=99.79  Aligned_cols=54  Identities=20%  Similarity=0.402  Sum_probs=42.6

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...||+.|||||.+. +.++.++|||||||++|||++ |+.||.. .+..+....+.
T Consensus       169 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~-~~~~~~~~~i~  224 (277)
T d1xbba_         169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG-MKGSEVTAMLE  224 (277)
T ss_dssp             --CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT-CCHHHHHHHHH
T ss_pred             ccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCC-CCHHHHHHHHH
Confidence            468999999999876 679999999999999999998 8999976 34444444443

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.31  E-value=5.4e-13  Score=101.10  Aligned_cols=61  Identities=21%  Similarity=0.264  Sum_probs=48.9

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhcc
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI   69 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~   69 (199)
                      .....+||+.|||||++. ..++.++|+||+||++|+|++|+.||.. .+....+..+.....
T Consensus       184 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~-~~~~~~~~~i~~~~~  245 (352)
T d1koba_         184 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG-EDDLETLQNVKRCDW  245 (352)
T ss_dssp             CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC-SSHHHHHHHHHHCCC
T ss_pred             ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhCCC
Confidence            345679999999999887 5699999999999999999999999976 344455555655443

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.31  E-value=4.6e-13  Score=101.97  Aligned_cols=47  Identities=23%  Similarity=0.465  Sum_probs=40.8

Q ss_pred             eeeccCCCccccccccc-c-cCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE-E-HYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~-~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ....+||+.|||||++. + .++.++|+|||||+||+|++|+.||....
T Consensus       162 ~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~  210 (364)
T d1omwa3         162 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK  210 (364)
T ss_dssp             CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSC
T ss_pred             ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCC
Confidence            34568999999999875 4 48999999999999999999999997643

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=4.4e-13  Score=98.83  Aligned_cols=54  Identities=19%  Similarity=0.397  Sum_probs=43.7

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~   65 (199)
                      ..+||+.|||||++. +.++.++|||||||++|||++ |+.||.... ..+....+.
T Consensus       171 ~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~-~~~~~~~i~  226 (285)
T d1u59a_         171 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-GPEVMAFIE  226 (285)
T ss_dssp             SSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-THHHHHHHH
T ss_pred             ccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCC-HHHHHHHHH
Confidence            457899999999887 679999999999999999998 999998743 334444443

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=6.7e-13  Score=96.44  Aligned_cols=57  Identities=18%  Similarity=0.442  Sum_probs=45.3

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHHh
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~~   66 (199)
                      .....||+.|+|||++. +.++.++|||||||++|||+| |+.||... +..+....+..
T Consensus       158 ~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~-~~~~~~~~i~~  216 (258)
T d1k2pa_         158 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF-TNSETAEHIAQ  216 (258)
T ss_dssp             CCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS-CHHHHHHHHHT
T ss_pred             ecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCC-CHHHHHHHHHh
Confidence            33567899999999887 679999999999999999998 89899764 44455444443

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=6.5e-13  Score=97.29  Aligned_cols=58  Identities=21%  Similarity=0.477  Sum_probs=42.7

Q ss_pred             eeeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHHh
Q psy360            8 VNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ......||+.|+|||++. +.++.++|||||||++|||++ |..||.. .+..+.+..+..
T Consensus       165 ~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~-~~~~~~~~~i~~  224 (273)
T d1mp8a_         165 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG-VKNNDVIGRIEN  224 (273)
T ss_dssp             ------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTT-CCGGGHHHHHHT
T ss_pred             eccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCC-CCHHHHHHHHHc
Confidence            345668899999999886 679999999999999999998 8888866 445555555544

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=9.1e-13  Score=97.73  Aligned_cols=57  Identities=18%  Similarity=0.163  Sum_probs=44.5

Q ss_pred             eeeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360            9 NIRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ....+||+.|||||++.  ..++.++|+|||||++|||++|..||... +..+.+..+..
T Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~-~~~~~l~~i~~  215 (299)
T d1ua2a_         157 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD-SDLDQLTRIFE  215 (299)
T ss_dssp             CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH
T ss_pred             ccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCC-CHHHHHHHHHH
Confidence            34568999999999775  35899999999999999999999998763 34344444443

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=5.8e-14  Score=104.86  Aligned_cols=60  Identities=17%  Similarity=0.223  Sum_probs=45.6

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhcc
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI   69 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~   69 (199)
                      ...+||+.|+|||++. +.++.++|||||||++|||+++..|+....+....+..++....
T Consensus       205 ~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~  265 (311)
T d1t46a_         205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF  265 (311)
T ss_dssp             SSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTC
T ss_pred             eecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC
Confidence            3568999999999887 77999999999999999999955565554555444555555443

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.26  E-value=6.8e-13  Score=98.17  Aligned_cols=47  Identities=13%  Similarity=0.153  Sum_probs=41.2

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      ...+||+.|||||++. ..++.++|+|||||++++|++|+.||.....
T Consensus       171 ~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~  218 (293)
T d1csna_         171 KNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA  218 (293)
T ss_dssp             CCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS
T ss_pred             CceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccc
Confidence            3568999999999887 5699999999999999999999999975433

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.26  E-value=1.2e-12  Score=97.21  Aligned_cols=59  Identities=17%  Similarity=0.224  Sum_probs=44.1

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhh
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSV   67 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~   67 (199)
                      .++.+||+.|||||.+. ..++.++|||||||++|||++|..|+....+..+....+...
T Consensus       199 ~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~  258 (301)
T d1lufa_         199 DGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDG  258 (301)
T ss_dssp             ---CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT
T ss_pred             cCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcC
Confidence            44678999999999876 679999999999999999999865433445666665555443

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.26  E-value=1.1e-12  Score=97.34  Aligned_cols=53  Identities=21%  Similarity=0.483  Sum_probs=40.7

Q ss_pred             ccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHH
Q psy360           12 TQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        12 ~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~   65 (199)
                      ..||+.|||||++. +.++.++|||||||++|||+| |+.||... +..+....+.
T Consensus       193 ~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~-~~~~~~~~i~  247 (299)
T d1jpaa_         193 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM-TNQDVINAIE  247 (299)
T ss_dssp             ---CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHH
T ss_pred             ccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCC-CHHHHHHHHH
Confidence            46899999999876 679999999999999999998 89999763 4444444443

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=9.9e-13  Score=97.00  Aligned_cols=56  Identities=23%  Similarity=0.388  Sum_probs=45.2

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHH
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV   64 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i   64 (199)
                      .....||+.|||||++. +.++.++|||||||++|||++|..|+....+.......+
T Consensus       173 ~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i  229 (287)
T d1opja_         173 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL  229 (287)
T ss_dssp             ETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred             eccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHH
Confidence            33457899999999876 779999999999999999999888877666665554433

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.4e-12  Score=97.58  Aligned_cols=56  Identities=23%  Similarity=0.332  Sum_probs=41.2

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHH
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~   65 (199)
                      .....||+.|||||++. +.++.++|||||||++|||+| |..||.. .+..+....+.
T Consensus       170 ~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~-~~~~~~~~~i~  227 (317)
T d1xkka_         170 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IPASEISSILE  227 (317)
T ss_dssp             -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT-SCGGGHHHHHH
T ss_pred             ccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCC-CCHHHHHHHHH
Confidence            34567999999999776 779999999999999999998 7777765 34444544443

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.7e-12  Score=95.65  Aligned_cols=57  Identities=18%  Similarity=0.250  Sum_probs=44.4

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ....||+.|+|||++. +.++.++|||||||++|||++|..|+.......+.+..+..
T Consensus       172 ~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~  229 (285)
T d1fmka3         172 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER  229 (285)
T ss_dssp             ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT
T ss_pred             ccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence            3568999999999876 78999999999999999999987787776666666555543

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=5.3e-13  Score=97.78  Aligned_cols=45  Identities=18%  Similarity=0.374  Sum_probs=38.9

Q ss_pred             eeeccCCCccccccccc-cc-CCCcCcchhHHHHHHHHHhCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE-EH-YDESVDVYAFGMCMLEMSTSEYPYME   53 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~-~~~~~d~ws~gv~l~~l~~g~~p~~~   53 (199)
                      .+..+||+.|||||++. .. ++.++|+|||||++|+|++|+.||..
T Consensus       166 ~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~  212 (273)
T d1xwsa_         166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH  212 (273)
T ss_dssp             BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             ccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCC
Confidence            44678999999999886 34 46789999999999999999999964

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.23  E-value=1.3e-12  Score=96.77  Aligned_cols=47  Identities=9%  Similarity=0.115  Sum_probs=40.9

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      ...+||+.|||||.+. ..++.++|+|||||+++||++|+.||.....
T Consensus       171 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~  218 (299)
T d1ckia_         171 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA  218 (299)
T ss_dssp             CSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-
T ss_pred             CCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccch
Confidence            3568999999999887 4699999999999999999999999976443

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=2.8e-12  Score=95.98  Aligned_cols=60  Identities=17%  Similarity=0.339  Sum_probs=48.9

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhcc
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI   69 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~   69 (199)
                      ....+||+.|+|||.+. ..++.++|+||+||++|+|++|..||.. .+....+..+.....
T Consensus       160 ~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~-~~~~~~~~~i~~~~~  220 (321)
T d1tkia_         160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA-ETNQQIIENIMNAEY  220 (321)
T ss_dssp             EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC-SSHHHHHHHHHHTCC
T ss_pred             ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhCCC
Confidence            44568999999999876 5699999999999999999999999976 455556666665443

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=3.2e-12  Score=95.15  Aligned_cols=57  Identities=19%  Similarity=0.279  Sum_probs=42.1

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ....||+.|+|||.+. +.++.++|||||||++|||++|..|+....+..+....+..
T Consensus       184 ~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~  241 (309)
T d1fvra_         184 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ  241 (309)
T ss_dssp             ----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG
T ss_pred             cceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHh
Confidence            3557899999999886 67999999999999999999976654444566565555443

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.18  E-value=8.5e-12  Score=91.43  Aligned_cols=61  Identities=21%  Similarity=0.389  Sum_probs=47.6

Q ss_pred             eeeeccCCCccccccccc-------ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHhhcc
Q psy360            8 VNIRTQRTPEFMAPEMYE-------EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI   69 (199)
Q Consensus         8 ~~~~~~gt~~y~ape~~~-------~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~~~~   69 (199)
                      .....+||+.|+|||.+.       ..++.++|+||+||++++|++|+.||.. .+.......+.....
T Consensus       165 ~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~-~~~~~~~~~i~~~~~  232 (277)
T d1phka_         165 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH-RKQMLMLRMIMSGNY  232 (277)
T ss_dssp             CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHTCC
T ss_pred             ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCC-CCHHHHHHHHHhCCC
Confidence            345678999999999774       2378899999999999999999999986 445555556665443

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=5.3e-12  Score=91.81  Aligned_cols=54  Identities=22%  Similarity=0.453  Sum_probs=40.6

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKV   64 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i   64 (199)
                      ....+|+.|+|||++. +.++.++|||||||++|||++ |+.|+.. .+..+....+
T Consensus       158 ~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~-~~~~~~~~~i  213 (262)
T d1byga_         158 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR-IPLKDVVPRV  213 (262)
T ss_dssp             ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT-SCGGGHHHHH
T ss_pred             ccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCC-CCHHHHHHHH
Confidence            3568899999999876 779999999999999999998 6766654 4555555444

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1.3e-12  Score=97.03  Aligned_cols=43  Identities=23%  Similarity=0.339  Sum_probs=35.8

Q ss_pred             eeccCCCccccccccccc-------CCCcCcchhHHHHHHHHHhCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYEEH-------YDESVDVYAFGMCMLEMSTSEYPYM   52 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~~~-------~~~~~d~ws~gv~l~~l~~g~~p~~   52 (199)
                      ...+||+.|||||++.+.       ++.++|||||||+||||++|..|+.
T Consensus       170 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~  219 (303)
T d1vjya_         170 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG  219 (303)
T ss_dssp             --CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTT
T ss_pred             cceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCC
Confidence            457899999999987632       6779999999999999999987764

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=8.4e-12  Score=93.15  Aligned_cols=44  Identities=23%  Similarity=0.253  Sum_probs=39.1

Q ss_pred             eccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           11 RTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        11 ~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ..+||+.|+|||++.  ..++.++|+|||||++++|++|+.||.+.
T Consensus       180 ~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~  225 (318)
T d3blha1         180 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN  225 (318)
T ss_dssp             SCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCC
Confidence            458999999999775  35899999999999999999999999763

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=4.9e-12  Score=94.21  Aligned_cols=54  Identities=20%  Similarity=0.329  Sum_probs=40.8

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHH
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV   64 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i   64 (199)
                      ...||+.|+|||.+. +.++.++||||||+++|||++|+.||....+.......+
T Consensus       193 ~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i  247 (311)
T d1r0pa_         193 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL  247 (311)
T ss_dssp             CSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHH
T ss_pred             cccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHH
Confidence            467899999999876 789999999999999999999888887654444333333

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=7.2e-12  Score=92.83  Aligned_cols=55  Identities=25%  Similarity=0.457  Sum_probs=43.2

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHh-CCCCCCCCCChhHHHHHHH
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMST-SEYPYMECIGPAQIYKKVV   65 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~-g~~p~~~~~~~~~~~~~i~   65 (199)
                      ...+||+.|+|||.+. +.++.++|+|||||++|||++ |..||.. .+....+..+.
T Consensus       195 ~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~-~~~~~~~~~i~  251 (299)
T d1fgka_         195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK  251 (299)
T ss_dssp             TTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT-CCHHHHHHHHH
T ss_pred             ccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCC-CCHHHHHHHHH
Confidence            3468899999999876 789999999999999999998 6777754 45555544433

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.12  E-value=9.1e-11  Score=88.86  Aligned_cols=83  Identities=17%  Similarity=0.225  Sum_probs=64.6

Q ss_pred             ccccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-----------CCCccceeeeee
Q psy360          108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-----------HPNIVSFYGYWE  176 (199)
Q Consensus       108 ~~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~  176 (199)
                      +|++++.||+|+||+||+|.+..++..||+|.+...   ....+.+.+|+.+++.++           |+||+++++++.
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~---~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~   90 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   90 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc---ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEee
Confidence            489999999999999999999999999999998643   233456778888887775           578999998875


Q ss_pred             eeecCCceEEEEEeccCCC
Q psy360          177 VTLTKRKYIVLVTELMTSG  195 (199)
Q Consensus       177 ~~~~~~~~~~lv~E~~~~G  195 (199)
                      ..  .....+++|+++..+
T Consensus        91 ~~--~~~~~~~~~~~~~~~  107 (362)
T d1q8ya_          91 HK--GPNGVHVVMVFEVLG  107 (362)
T ss_dssp             EE--ETTEEEEEEEECCCC
T ss_pred             ec--cccceeeeeeecccc
Confidence            22  345667777776544

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=3e-11  Score=89.34  Aligned_cols=48  Identities=23%  Similarity=0.283  Sum_probs=40.4

Q ss_pred             eeeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIG   56 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~   56 (199)
                      ....+||+.|+|||.+.  +..+.++|+|||||++|+|++|+.||.....
T Consensus       159 ~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~  208 (298)
T d1gz8a_         159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE  208 (298)
T ss_dssp             TTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             ceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCH
Confidence            33568999999999765  3468999999999999999999999986433

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=2.8e-11  Score=89.91  Aligned_cols=56  Identities=20%  Similarity=0.360  Sum_probs=44.0

Q ss_pred             eccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ..+||+.|+|||.+. +.++.++|+|||||++|||++|..|+....+..+.+..+..
T Consensus       194 ~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~  250 (308)
T d1p4oa_         194 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME  250 (308)
T ss_dssp             SSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHT
T ss_pred             ceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence            457899999999876 67999999999999999999986444444566666655554

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=2.5e-11  Score=90.72  Aligned_cols=46  Identities=28%  Similarity=0.429  Sum_probs=38.7

Q ss_pred             eeeccCCCcccccccccc---cCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYEE---HYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~~---~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      .....||+.|+|||.+.+   .++.++|||||||+||+|++|+.||...
T Consensus       187 ~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~  235 (322)
T d1vzoa_         187 AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD  235 (322)
T ss_dssp             GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred             ccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence            446789999999997752   4788999999999999999999999764

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=5.1e-11  Score=89.85  Aligned_cols=47  Identities=26%  Similarity=0.301  Sum_probs=40.7

Q ss_pred             eeeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      .+..+||+.|+|||.+.  ..++.++|+||+||++++|++|+.||....
T Consensus       175 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~  223 (346)
T d1cm8a_         175 MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD  223 (346)
T ss_dssp             CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCC
Confidence            34578999999999775  357999999999999999999999997753

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=5.5e-11  Score=89.68  Aligned_cols=47  Identities=21%  Similarity=0.284  Sum_probs=40.5

Q ss_pred             eeeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ....+||+.|+|||++.  ..++.++|+||+||++++|++|+.||....
T Consensus       169 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~  217 (345)
T d1pmea_         169 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH  217 (345)
T ss_dssp             TCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             eccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCC
Confidence            34568999999999875  357899999999999999999999997643

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.04  E-value=6.9e-11  Score=86.84  Aligned_cols=55  Identities=16%  Similarity=0.284  Sum_probs=40.6

Q ss_pred             eeeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHH
Q psy360            9 NIRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV   64 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i   64 (199)
                      .....||+.|+|||.+.  ..++.++|+|||||+++||++|+.||.+.. ..+.+..+
T Consensus       157 ~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~-~~~~~~~i  213 (286)
T d1ob3a_         157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS-EADQLMRI  213 (286)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHH
T ss_pred             cceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCC-HHHHHHHH
Confidence            34557999999999775  357999999999999999999999997643 33333333

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=7e-11  Score=89.26  Aligned_cols=47  Identities=21%  Similarity=0.299  Sum_probs=40.5

Q ss_pred             eeeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECI   55 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~   55 (199)
                      ....+||+.|+|||.+.  ..++.++|+||+||+++||++|+.||....
T Consensus       179 ~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~  227 (350)
T d1q5ka_         179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS  227 (350)
T ss_dssp             CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSS
T ss_pred             cccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCC
Confidence            44568999999999664  468999999999999999999999997643

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=8.7e-11  Score=88.92  Aligned_cols=46  Identities=26%  Similarity=0.289  Sum_probs=36.8

Q ss_pred             eeeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360            9 NIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ....+||+.|+|||++. ..++.++|+||+||++++|++|+.||...
T Consensus       175 ~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~  221 (355)
T d2b1pa1         175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR  221 (355)
T ss_dssp             ------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCC
Confidence            44568999999999886 56999999999999999999999999764

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.95  E-value=1.5e-09  Score=74.88  Aligned_cols=79  Identities=15%  Similarity=0.112  Sum_probs=57.7

Q ss_pred             ccceeecCccceeEEEEEECCCCcEEEEEEecccccC----------------HHHHHHHHHHHHHHhcCCCCCccceee
Q psy360          110 KFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN----------------KAERARFREEAEMLKGLQHPNIVSFYG  173 (199)
Q Consensus       110 ~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~----------------~~~~~~~~~E~~~l~~l~h~niv~l~~  173 (199)
                      .+++.||+|+||.||+|.+. ++..||+|.++.....                .........|...+.++.|.|++..++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             hhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            46789999999999999874 6889999986432110                111234567889999999999998876


Q ss_pred             eeeeeecCCceEEEEEeccCCCCC
Q psy360          174 YWEVTLTKRKYIVLVTELMTSGTL  197 (199)
Q Consensus       174 ~~~~~~~~~~~~~lv~E~~~~G~L  197 (199)
                      +..        .+++|||++++.+
T Consensus        82 ~~~--------~~lvme~~~~~~~   97 (191)
T d1zara2          82 WEG--------NAVLMELIDAKEL   97 (191)
T ss_dssp             EET--------TEEEEECCCCEEG
T ss_pred             ecC--------CEEEEEeeccccc
Confidence            431        2799999987644

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.92  E-value=1.2e-10  Score=88.27  Aligned_cols=45  Identities=16%  Similarity=0.349  Sum_probs=38.4

Q ss_pred             eeccCCCccccccccc-ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~-~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ...+||+.|+|||++. ..++.++|+||+||++++|++|+.||...
T Consensus       187 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~  232 (362)
T d1q8ya_         187 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD  232 (362)
T ss_dssp             CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             ccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCC
Confidence            4568999999999776 67999999999999999999999999754

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=98.89  E-value=4.7e-10  Score=83.82  Aligned_cols=50  Identities=20%  Similarity=0.321  Sum_probs=42.2

Q ss_pred             eeeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCCCChh
Q psy360            9 NIRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPA   58 (199)
Q Consensus         9 ~~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~   58 (199)
                      ....+||+.|+|||.+.  ..++.++|+||+||++++|++|+.||....+..
T Consensus       186 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~  237 (328)
T d3bqca1         186 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY  237 (328)
T ss_dssp             CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH
T ss_pred             ccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhH
Confidence            44568999999999765  358999999999999999999999998765543

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=6.5e-10  Score=81.61  Aligned_cols=56  Identities=16%  Similarity=0.272  Sum_probs=44.7

Q ss_pred             eccCCCccccccccc-c-cCCCcCcchhHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy360           11 RTQRTPEFMAPEMYE-E-HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS   66 (199)
Q Consensus        11 ~~~gt~~y~ape~~~-~-~~~~~~d~ws~gv~l~~l~~g~~p~~~~~~~~~~~~~i~~   66 (199)
                      ...+++.|+|||.+. . .++.++|+|||||++++|++|+.||....+..+.+..+..
T Consensus       160 ~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~  217 (292)
T d1unla_         160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR  217 (292)
T ss_dssp             SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHH
T ss_pred             eeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHh
Confidence            456788999999775 3 4799999999999999999999998876666655555444

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=4.6e-10  Score=84.55  Aligned_cols=45  Identities=27%  Similarity=0.404  Sum_probs=38.9

Q ss_pred             eeccCCCccccccccc--ccCCCcCcchhHHHHHHHHHhCCCCCCCC
Q psy360           10 IRTQRTPEFMAPEMYE--EHYDESVDVYAFGMCMLEMSTSEYPYMEC   54 (199)
Q Consensus        10 ~~~~gt~~y~ape~~~--~~~~~~~d~ws~gv~l~~l~~g~~p~~~~   54 (199)
                      ....||+.|+|||...  ..++.++|+|||||++++|++|+.||...
T Consensus       176 ~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~  222 (348)
T d2gfsa1         176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT  222 (348)
T ss_dssp             SSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCC
Confidence            3567899999999654  34789999999999999999999999764

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=93.34  E-value=0.24  Score=33.69  Aligned_cols=75  Identities=15%  Similarity=-0.005  Sum_probs=46.2

Q ss_pred             eecCcc-ceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCCC--CCccceeeeeeeeecCCceEEEEEe
Q psy360          114 EIGRGS-FKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQH--PNIVSFYGYWEVTLTKRKYIVLVTE  190 (199)
Q Consensus       114 ~lG~G~-fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~~~~~lv~E  190 (199)
                      .+..|. -+.||+... ..+..+.+|.......     ..+..|...++.+..  -.+.+++.+..    ..+..++|||
T Consensus        17 ~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~~-----~~l~~E~~~l~~L~~~gvpvP~v~~~~~----~~~~~~~v~~   86 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGAL-----NELQDEAARLSWLATTGVPCAAVLDVVT----EAGRDWLLLG   86 (255)
T ss_dssp             ECSCTTSSCEEEEEEC-TTSCCEEEEEECSCTT-----SCHHHHHHHHHHHHTTTCCBCCEEEEEE----CSSCEEEEEE
T ss_pred             EcCCcccCCeEEEEEe-CCCCEEEEEeCCccCH-----hHHHHHHHHHHHHHhcCCCCCceeeecc----cccceEEEEE
Confidence            334443 356888764 3444566776543221     236677777776643  33556777665    5677899999


Q ss_pred             ccCCCCCC
Q psy360          191 LMTSGTLK  198 (199)
Q Consensus       191 ~~~~G~L~  198 (199)
                      |++|-++.
T Consensus        87 ~i~G~~~~   94 (255)
T d1nd4a_          87 EVPGQDLL   94 (255)
T ss_dssp             CCSSEETT
T ss_pred             eeeccccc
Confidence            99986653

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.39  E-value=0.085  Score=36.35  Aligned_cols=81  Identities=9%  Similarity=0.012  Sum_probs=48.2

Q ss_pred             cccceeecCccceeEEEEEECCCCcEEEEEEecccccCHHHHHHHHHHHHHHhcCC-CCCccceeeeeeeeecCCceEEE
Q psy360          109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKAERARFREEAEMLKGLQ-HPNIVSFYGYWEVTLTKRKYIVL  187 (199)
Q Consensus       109 ~~~~~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~l  187 (199)
                      ++..+..+.++.+.||+..  ..+..+.+|........  ....+.+|...+..+. +--+.+++.+..    .++..++
T Consensus        16 ~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~--~~~~~~~E~~~l~~l~~~vpvP~vl~~~~----~~~~~~l   87 (263)
T d1j7la_          16 YRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKG--TTYDVEREKDMMLWLEGKLPVPKVLHFER----HDGWSNL   87 (263)
T ss_dssp             SEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTT--STTCHHHHHHHHHHHTTTSCCCCEEEEEE----ETTEEEE
T ss_pred             eEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCccc--chhhHHHHHHHHHHHhccCCCCcEEEEEe----cCCceEE
Confidence            3444443334456789765  33445566766432211  1223567777777664 434566777665    5678899


Q ss_pred             EEeccCCCCC
Q psy360          188 VTELMTSGTL  197 (199)
Q Consensus       188 v~E~~~~G~L  197 (199)
                      ||++++|.++
T Consensus        88 v~~~l~G~~~   97 (263)
T d1j7la_          88 LMSEADGVLC   97 (263)
T ss_dssp             EEECCSSEEH
T ss_pred             EEEecccccc
Confidence            9999988654

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=89.14  E-value=0.22  Score=36.74  Aligned_cols=77  Identities=19%  Similarity=0.133  Sum_probs=45.2

Q ss_pred             eeecCccceeEEEEEECCCCcEEEEEEecccc-cCH----HHHHHHHHHHHHHhcCC-C--CCccceeeeeeeeecCCce
Q psy360          113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK-LNK----AERARFREEAEMLKGLQ-H--PNIVSFYGYWEVTLTKRKY  184 (199)
Q Consensus       113 ~~lG~G~fg~v~~~~~~~~~~~~a~k~~~~~~-~~~----~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~~~~  184 (199)
                      +.||.|....||+..+..++..+.+|.-.... ...    ...++...|...+..+. +  ..+.+++.+.      .+.
T Consensus        32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d------~~~  105 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD------TEM  105 (392)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE------TTT
T ss_pred             EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc------CCC
Confidence            56899999999999877777788888643211 111    11233556777776552 2  3455666542      334


Q ss_pred             EEEEEeccCCC
Q psy360          185 IVLVTELMTSG  195 (199)
Q Consensus       185 ~~lv~E~~~~G  195 (199)
                      .++|||++.+.
T Consensus       106 ~~lvmE~L~~~  116 (392)
T d2pula1         106 AVTVMEDLSHL  116 (392)
T ss_dssp             TEEEECCCTTS
T ss_pred             CEEEEeccCCc
Confidence            47899999764