Diaphorina citri psyllid: psy3622

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960----
MSSNMATSTEIEEFLKGPLVTWLLSCLSNPDRLSDYEDLADGIYIHEVYLLIDPEPVHQSVVPSLRNASVRIKNFNTIVKNIKSLYEEELCQIVLVLPDVLIIGREPESKQGLENMKLLLLLLLGCAVQCPNKETFIERIKELPVESQHALVDCIKQVTENQDIVLSLDNCEGVPTEVMVSNVKALAKERDRYLQTWRLVEEKRNPSIGNSECQHLAVELADLKSKLRKQRLELEEKSEHLTESRDELEHHKALINRMKAEMLELRAEARSGKALESEIQRYKDKLTDLEYYKSRVEELRQDNRAINEIALERDANAEKLQQLIEENTNLSLLSKSNQCVDNQSVSSVDLNDLASPGSGDNSLSEQLTSSAQAKALRLELENKRLLSTIESLHENAFYESGERILELEKEKKKLSLQVEDLEETKRRLSAQCTEYESKFTKLETEIRKINESYQNLELQIQVRNDELDNMNREKQKLEWKNKELELNMEINKQLSNNTEEINEYKTKLANCEKEIKKCKEALESKAESLDKLTNKLESMEKEHVSLTKQIEDQENELKKYNDLKREMDELDSKYQVDKNTLSVLQNDLVNEKLKTTHLKNSLDKLGLAMDDQTDAENILEKILSSPEILNAVKKKLGVEHFNDESSLNNAKLEVDLKTSQSQISSLTSQHTALQLANSQLILANHNELLQDQMTMTKLHEQLNMEYESVVKEIKVLKSTLRDVKNENKTVKEQYSQLKVSYESLQAEMEQLKFESHSLSNLRAEHSKLKDDFRILFTANEKLKADFRALQEEHKGNHMEKRKLTLSLTELEGELANRDDAISALSVQLSKYQNKLEDDRRKLMEHVTNLLAQYHELLTHSLEDKDHYHEEEKNFSDKLNNLHRQKEKLEEKIMEHYRKLDSCSSSSKKKSFGANLVRKVRKAGSELINKSRKSWHEDSLRKDRGTDSDTSLEDTLEWKVTTRRG
ccccccccHHHHHHHcccHHHHHHHHccccccccHHHHHccHHHHHHHHHHccccccccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccHHHHccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHccccccccccccccccccHHHHHHHHHHHcccc
***********EEFLKGPLVTWLLSCLSNPDRLSDYEDLADGIYIHEVYLLIDPEPVHQSVVPSLRNASVRIKNFNTIVKNIKSLYEEELCQIVLVLPDVLIIGREPESKQGLENMKLLLLLLLGCAVQCPNKETFIERIKELPVESQHALVDCIKQVTENQDIVLSLDNCEGVPTEVMVSNVKALAKERDRYLQTWRLVE*************HLAV*******************************************************************LTDLEYYK********************************************************************************************L*TIESLHENAFY****************************************FTKLETEIRKINESYQNLELQI************************************************************************************************************************LSVLQNDLVNEKLK**********LGL*********NILEKILSSPEILNAVKKKLGV***********************************QLANSQLILANHNELLQDQMTMTKLHEQLNMEYESVVKEIKVLKSTL**************************************************DFRILFTANEKLK**********************************************************LMEHVTNLLAQYHELLTH*********************************************************************************************************
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MSSNMATSTEIEEFLKGPLVTWLLSCLSNPDRLSDYEDLADGIYIHEVYLLIDPEPVHQSVVPSLRNASVRIKNFNTIVKNIKSLYEEELCQIVLVLPDVLIIGREPESKQGLENMKLLLLLLLGCAVQCPNKETFIERIKELPVESQHALVDCIKQVTENQDIVLSLDNCEGVPTEVMVSNVKALAKERDRYLQTWRLVEEKRNPSIGNSExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxARSGKALESEIQRYKDKLTDLEYYKSRVEELRQDNRAxxxxxxxxxxxxxxxxxxxxxNTNLSLLSKSNQCVDNQSVSSVDLNDLASPGSGDNSLSEQLTSSAQAKxxxxxxxxxxxxxxxxxxxxxAFYESGERxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLSVLQNDLVNEKLKTTHLKNSLDKLGLAMDDQTDAENILEKILSSPEILNAVKKKLGVEHFNDESSLNxxxxxxxxxxxxxxxxxxxxxHTALQLANSQLILANHNELLQDQMTMTKLxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRAEHSKLKDDFRILFTANEKLKADFRALQEEHKGNHMEKRKLTLSLTELEGELANRDDAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxYHELLTHSLEDKDHYHEExxxxxxxxxxxxxxxxxxxxxxxxxxxxLDSCSSSSKKKSFGANLVRKVRKAGSELINKSRKSWHEDSLRKDRGTDSDTSLEDTLEWKVTTRRG

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0043229 [CC]intracellular organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0043226
GO:0044444 [CC]cytoplasmic partprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2DFS, chain A
Confidence level:very confident
Coverage over the Query: 422-433
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Template: 2DFS, chain A
Confidence level:very confident
Coverage over the Query: 107-128
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Template: 1WIX, chain A
Confidence level:very confident
Coverage over the Query: 13-162
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Template: 3NA7, chain A
Confidence level:confident
Coverage over the Query: 502-572
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Template: 3O0Z, chain A
Confidence level:probable
Coverage over the Query: 717-815,826-842
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Template: 2FXO, chain A
Confidence level:probable
Coverage over the Query: 381-488
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Template: 2V71, chain A
Confidence level:probable
Coverage over the Query: 806-857
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Template: 2V71, chain A
Confidence level:probable
Coverage over the Query: 645-683
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Template: 1C1G, chain A
Confidence level:probable
Coverage over the Query: 871-893
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Template: 4GKW, chain A
Confidence level:probable
Coverage over the Query: 512-597
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Template: 1SJJ, chain A
Confidence level:probable
Coverage over the Query: 214-587
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Template: 3A7P, chain A
Confidence level:probable
Coverage over the Query: 210-263
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View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
1g8x, chain Aprobable Alignment | Template Structure