Diaphorina citri psyllid: psy3640

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610------

LHGVEKCVGCYGNGSFVDFCVLLLLNIGNEEVITQVQAFDKSVFPPLSFQFITTMKLLRFLLRYYPPGITLEYTQGKDIKMKTIDLLDLDAFSGITLEYTQGKDIKMKTIDLLDLDENSYCYLSFKTFLFFSSSNVSEITKQVYSKEPLITASVITQLEQSIMKLQKKLKEGFAQRYEKFKMLKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLKAHEDDVFSCGFNYNGDTIITASKDNTCCIWRSMNRD

ccccccEEEECccccCEEEEEEccccccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccCEEEECccccccccccccccccccccccEEEECccccCEEEEEEECcccccEEECcccEEEEECccccccEEEEECcccccEEEEEEEcccHHHHHcccEEEcccccccccccccccccccEEEEEEcccccEEEEECccccEEEEEccccCEEEEEccccccEEEEEEcccccEEEECccccEEEEEccccCEEEEEccccccEEEEEEccccccEEEEECccccEEEEEccccEEEEEEcccccEEEEcccccEEEEECccccEEEEccccccEEEEEccccccEEEEEEcccccEEEEECccccEEEEEcccccccccccccccccccccEEEEcccccccEEEEEEcccccEEEEECccccEEEEEccccEEEEEEccccccEEEEEEcccccEEEEECccccEEEEEcccccccccccccccccccEEEEEEEcccccEEEEECccccEEEEEcccccccccccccccccEEEEEEcccccEEEEEcccccEEEEcccccEEEEEcccccccEEEEEEcccccEEEEEEccccEEEEEccccc

*HGVEKCVGCYGNGSFVDFCVLLLLNIGNEEVITQVQAFDKSVFPPLSFQFITTMKLLRFLLRYYPPGITLEYTQGKDIKMKTIDLLDLDAFSGITLEYTQGKDIKMKTIDLLDLDENSYCYLSFKTFLFFSSSNVSEITKQVYSKEPLITASVITQLEQSIMKLQKKLKEGFAQRYEKFKMLKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLKAHEDDVFSCGFNYNGDTIITASKDNTCCIWRSMN**

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LHGVEKCVGCYGNGSFVDFCVLLLLNIGNEEVITQVQAFDKSVFPPLSFQFITTMKLLRFLLRYYPPGITLEYTQGKDIKMKTIDLLDLDAFSGITLEYTQGKDIKMKTIDLLDLDENSYCYLSFKTFLFFSSSNVSEITKQVYSKEPLITASVxxxxxxxxxxxxxxxxxxxxxRYEKFKMLKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLKAHEDDVFSCGFNYNGDTIITASKDNTCCIWRSMNRD

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Outer row dynein assembly protein 16 homolog	May play a role in axonemal outer row dynein assembly.	confident	Q6P2Y2
Outer row dynein assembly protein 16 homolog	Required for axonemal dynein assembly and ciliary motility in ciliated organs, including Kupffer's vesicle, during embryogenesis.	confident	Q1LV15
Outer row dynein assembly protein 16 homolog	May play a role in axonemal outer row dynein assembly.	confident	Q5BK30

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0005488 [MF]	binding	probable	GO:0003674
GO:0030529 [CC]	ribonucleoprotein complex	probable	GO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0015630 [CC]	microtubule cytoskeleton	probable	GO:0005856, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0044428 [CC]	nuclear part	probable	GO:0005575, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0043234 [CC]	protein complex	probable	GO:0005575, GO:0032991
GO:0044430 [CC]	cytoskeletal part	probable	GO:0005856, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0043228, GO:0044424, GO:0043226, GO:0044422
GO:0044444 [CC]	cytoplasmic part	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0030424 [CC]	axon	probable	GO:0044464, GO:0005623, GO:0005575, GO:0097458, GO:0043005, GO:0042995

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3MKQ, chain A
Confidence level:very confident
Coverage over the Query: 177-382,399-615
View the alignment between query and template
View the model in PyMOL

Template: 3ZWL, chain B
Confidence level:very confident
Coverage over the Query: 262-487,535-614
View the alignment between query and template
View the model in PyMOL