Diaphorina citri psyllid: psy366

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730----
MVHLISRLICSLCSETFKSKPRLRAHIWKCQMEPETILETLGHQFESQLFTGPMEKCDIMCDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIHNCNLCSATFKTARGLKQHEKKHMTSILLTCDQCHSTEEAGCKCNRQLLQCSLCSETFKSKPSLRAHIWKCQMEPQTILETYNILSQCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTHIKPEHDLKTKMNLFTCHQCQSTEEAGCKCNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLPAIGRSYTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALKQHGRTHIKSRT
ccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccHHHHcccccccccccccccHHcccccccHHHcccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccc
MVHLISRLICSLCSETFKSKPRLRAHIWKCQMEPETILETLGHQFESQLFTGPMEKCDIMCDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIHNCNLCSATFKTARGLKQHEKKHMTSILLTCDQCHSTEEAGCKCNRQLLQCSLCSETFKSKPSLRAHIWKCQMEPQTILETYNILSQCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTHIKPEHDLKTKMNLFTCHQCQSTEEAGCKCNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLPAIGRSYTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALKQHGRTH*****
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MVHLISRLICSLCSETFKSKPRLRAHIWKCQMEPETILETLGHQFESQLFTGPMEKCDIMCDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIHNCNLCSATFKTARGLKQHEKKHMTSILLTCDQCHSTEEAGCKCNRQLLQCSLCSETFKSKPSLRAHIWKCQMEPQTILETYNILSQCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTHIKPEHDLKTKMNLFTCHQCQSTEEAGCKCNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLPAIGRSYTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALKQHGRTHIKSRT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Zinc finger protein 62 May play a role in differentiating skeletal muscle.confidentQ8C827
Zinc finger protein 62 homolog May play a role in differentiating skeletal muscle.confidentQ8NB50

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0008270 [MF]zinc ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0031981 [CC]nuclear lumenprobableGO:0005575, GO:0043231, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0003676 [MF]nucleic acid bindingprobableGO:0097159, GO:0003674, GO:1901363, GO:0005488
GO:0006355 [BP]regulation of transcription, DNA-dependentprobableGO:0009889, GO:0080090, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0051252, GO:2000112, GO:0050794, GO:0050789, GO:0019219, GO:0010556, GO:0065007, GO:0051171, GO:2001141, GO:0008150, GO:0010468

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2CSH, chain A
Confidence level:very confident
Coverage over the Query: 613-699
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Template: 2CSH, chain A
Confidence level:very confident
Coverage over the Query: 648-730
View the alignment between query and template
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Template: 2DLQ, chain A
Confidence level:very confident
Coverage over the Query: 588-704
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Template: 2I13, chain A
Confidence level:very confident
Coverage over the Query: 542-701
View the alignment between query and template
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Template: 1LLM, chain C
Confidence level:very confident
Coverage over the Query: 57-141
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Template: 1A1I, chain A
Confidence level:probable
Coverage over the Query: 400-483
View the alignment between query and template
View the model in PyMOL
Template: 1G2D, chain C
Confidence level:probable
Coverage over the Query: 369-456
View the alignment between query and template
View the model in PyMOL