Diaphorina citri psyllid: psy3680

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420--
MIRFKAHLLLTHMKKFVNSSGQQIRHYSDHKISFPQRIFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKENIQLMAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAELKQSPTGLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQLLPQDESAGKVKSLKDPSKKMSKSDLDSNSKIEITDPPEVIVRKCKKALTDCTSAVTYDPENRPAVSNLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSKEHLEKVLLDGSIRAQAIAVETWDEVKSAAVGGILTAFGQGTYLGTPEMDGLLLVSYRWADYQLTLAFDQVPIWGLLKWMGYFSCPTDGLTTS
ccccccHHHHHHHHHHcccccccccccccccccccccEEEcccccccccHHHHHHHHHHHHHHHcccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHcccccccccEEEcccccHHHHHHHHHHccccccccccccHHHHHHcccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccCEccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHccccHHHHcccccHHHHHHHHHccccccccccccc
***FKAHLLLTHMKKFVNSS**QI********SFPQRIFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKENIQLMAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAELKQSPTGLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQLLPQDESAGKVKS*****************KIEITDPPEVIVRKCKKALTDCTSAVTYDPENRPAVSNLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSKEHLEKVLLDGSIRAQAIAVETWDEVKSAAVGGILTAFGQGTYLGTPEMDGLLLVSYRWADYQLTLAFDQVPIWGLLKWMGYFSCPTDGL***
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MIRFKAHLLLTHMKKFVNSSGQQIRHYSDHKISFPQRIFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKENIQLMAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAELKQSPTGLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQLLPQDESAGKVKSLKDPSKKMSKSDLDSNSKIEITDPPEVIVRKCKKALTDCTSAVTYDPENRPAVSNLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSKEHLEKVLLDGSIRAQAIAVETWDEVKSAAVGGILTAFGQGTYLGTPEMDGLLLVSYRWADYQLTLAFDQVPIWGLLKWMGYFSCPTDGLTTS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Tryptophan--tRNA ligase, mitochondrial confidentQ9UGM6
Tryptophan--tRNA ligase, mitochondrial confidentQ9CYK1
Tryptophan--tRNA ligase, mitochondrial confidentQ3T099

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0001570 [BP]vasculogenesisprobableGO:0032502, GO:0032501, GO:0048856, GO:0044707, GO:0008150, GO:0048869, GO:0001568, GO:0030154, GO:0001944, GO:0044767, GO:0072359, GO:0072358, GO:0048514, GO:0044699, GO:0048731, GO:0044763, GO:0009987, GO:0009653, GO:0007275, GO:0048646
GO:0004830 [MF]tryptophan-tRNA ligase activityprobableGO:0004812, GO:0003824, GO:0003674, GO:0016874, GO:0016875, GO:0016876
GO:0005524 [MF]ATP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0030554, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032553, GO:0032559, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0006436 [BP]tryptophanyl-tRNA aminoacylationprobableGO:0006139, GO:0019752, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0044281, GO:0034645, GO:0034660, GO:1901360, GO:0044267, GO:0044710, GO:0044260, GO:0006520, GO:0071704, GO:0010467, GO:1901576, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0043436, GO:0046483, GO:0016070, GO:0044238, GO:1901564, GO:0006082, GO:0019538, GO:0044237, GO:0043170, GO:0006399, GO:0043038, GO:0043039, GO:0006418, GO:0006412
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0005759 [CC]mitochondrial matrixprobableGO:0005737, GO:0005575, GO:0043231, GO:0043233, GO:0031974, GO:0044464, GO:0043229, GO:0005739, GO:0005622, GO:0044446, GO:0070013, GO:0044444, GO:0044429, GO:0044424, GO:0005623, GO:0043227, GO:0043226, GO:0044422

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
6.-.-.-Ligases.probable
6.1.-.-1D-1-guanidino-3-amino-1,3-dideoxy-scyllo-inositol transaminase.probable
6.1.1.-Ligases forming aminoacyl-tRNA and related compounds.probable
6.1.1.2Tryptophan--tRNA ligase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3P0J, chain A
Confidence level:very confident
Coverage over the Query: 22-345,376-410
View the alignment between query and template
View the model in PyMOL
Template: 3PRH, chain A
Confidence level:very confident
Coverage over the Query: 38-141,152-363
View the alignment between query and template
View the model in PyMOL