Psyllid ID: psy3680

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420--
MIRFKAHLLLTHMKKFVNSSGQQIRHYSDHKISFPQRIFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKENIQLMAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAELKQSPTGLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQLLPQDESAGKVKSLKDPSKKMSKSDLDSNSKIEITDPPEVIVRKCKKALTDCTSAVTYDPENRPAVSNLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSKEHLEKVLLDGSIRAQAIAVETWDEVKSAAVGGILTAFGQGTYLGTPEMDGLLLVSYRWADYQLTLAFDQVPIWGLLKWMGYFSCPTDGLTTS
ccccccHHHHHHHHHHHccccccccccccccccccccEEEcccccccccHHHHHHHHHHHHHHHcccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHccccccccEEEccccHHHHHHHHHHHccccccccccccHHHHHHcccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHccccHHHHcccccHHHHHHHHHHcccccccccccc
cccEEHHHHHHHcHccccccccccccccccccccccEEEEcccccccEEHHHHHHHHHHHHHHHHccccEEEEEcHHHHccccccHHHHHHHHHHHHHHHHHcccccccEEEEEHHHccHHHHHHHHHHccccHHHHHccHHHHHHccccccccHHHHcHHHHHHHHHHcccccEEEccHHHHHHHHHHHHHHHHHHHHHcccccccEcccccccccccEcccccccEcccccccHHHccEccccHHHHHHHHHccccccccccccEcccEHHHHHHHHHHHHHHcccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccccccccccccEEEEEHHHHHHHHHHHHccccHHHHHHHHccccccccccccc
MIRFKAHLLLTHMKKFvnssgqqirhysdhkisfpqrifsgiqptgtlhlgnYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKENIQLMAASLLAcgidpqksilfqqsqvpehtQLAWVLTCLCtvnrlnhmptyVEKCAElkqsptglflyPVLQAADILLYKathipagldqiHNINLANHLTQLfnnkfdkifpipqllpqdesagkvkslkdpskkmsksdldsnskieitdppeVIVRKCKKALTDctsavtydpenrpavSNLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSKEHLEKVLLDGSIRAQAIAVETWDEVKSAAVGGILTafgqgtylgtpemdGLLLVSYRWADYQLTLAFDQVPIWGLLkwmgyfscptdgltts
MIRFKAHLLLTHMKKFVNSSGQQIRHYSDHKISFPQRIFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKENIQLMAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAELKQSPTGLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQllpqdesagkvkslkdpskkmsksdldsnskieitdppeviVRKCKKALTDCTSavtydpenrpAVSNLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSKEHLEKVLLDGSIRAQAIAVETWDEVKSAAVGGILTAFGQGTYLGTPEMDGLLLVSYRWADYQLTLAFDQVPIWGLLKWMGYFSCPTDGLTTS
MIRFKAHLLLTHMKKFVNSSGQQIRHYSDHKISFPQRIFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKENIQLMAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAELKQSPTGLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQLLPQDESAGKVKSLKDPSKKMSKSDLDSNSKIEITDPPEVIVRKCKKALTDCTSAVTYDPENRPAVSNLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSKEHLEKVLLDGSIRAQAIAVETWDEVKSAAVGGILTAFGQGTYLGTPEMDGLLLVSYRWADYQLTLAFDQVPIWGLLKWMGYFSCPTDGLTTS
***FKAHLLLTHMKKFVNSSGQQIRHYSDHKISFPQRIFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKENIQLMAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAELKQSPTGLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQL*************************************EVIVRKCKKALTDCTSAVTYDPENRPAVSNLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSKEHLEKVLLDGSIRAQAIAVETWDEVKSAAVGGILTAFGQGTYLGTPEMDGLLLVSYRWADYQLTLAFDQVPIWGLLKWMGYFSCPT******
*************************************IFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKENIQLMAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVE********PTGLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQLLPQDESAGKVKS*****************KIEITDPPEVIVRKCKKALTDCTSAVTYDPENRPAVSNLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSKEHLEKVLLDGSIRAQAIAVETWDEVKSAAVGGILTAFGQGTY*G*P**DGLLLVSYRWADYQLTLAFDQVPIWGLLKWMGYFSCPTDGL***
MIRFKAHLLLTHMKKFVNSSGQQIRHYSDHKISFPQRIFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKENIQLMAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAELKQSPTGLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQLLPQDE**********************NSKIEITDPPEVIVRKCKKALTDCTSAVTYDPENRPAVSNLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSKEHLEKVLLDGSIRAQAIAVETWDEVKSAAVGGILTAFGQGTYLGTPEMDGLLLVSYRWADYQLTLAFDQVPIWGLLKWMGYFSCPTDGLTTS
MIRFKAHLLLTHMKKFVNSS**QI********SFPQRIFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKENIQLMAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAELKQSPTGLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQLLPQDESAGKVKSLKDPSKKMSKSDLDSNSKIEITDPPEVIVRKCKKALTDCTSAVTYDPENRPAVSNLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSKEHLEKVLLDGSIRAQAIAVETWDEVKSAAVGGILTAFGQGTYLGTPEMDGLLLVSYRWADYQLTLAFDQVPIWGLLKWMGYFSCPTD*****
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SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooo
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MIRFKAHLLLTHMKKFVNSSGQQIRHYSDHKISFPQRIFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKENIQLMAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAELKQSPTGLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQLLPQDESAGKVKSLKDPSKKMSKSDLDSNSKIEITDPPEVIVRKCKKALTDCTSAVTYDPENRPAVSNLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSKEHLEKVLLDGSIRAQAIAVETWDEVKSAAVGGILTAFGQGTYLGTPEMDGLLLVSYRWADYQLTLAFDQVPIWGLLKWMGYFSCPTDGLTTS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query422 2.2.26 [Sep-21-2011]
Q9UGM6360 Tryptophan--tRNA ligase, yes N/A 0.755 0.886 0.518 2e-91
Q9CYK1360 Tryptophan--tRNA ligase, yes N/A 0.755 0.886 0.518 3e-91
Q3T099360 Tryptophan--tRNA ligase, yes N/A 0.755 0.886 0.521 3e-91
Q8R9X8327 Tryptophan--tRNA ligase O yes N/A 0.753 0.972 0.413 3e-67
Q7NCG8336 Tryptophan--tRNA ligase O yes N/A 0.777 0.976 0.386 5e-67
Q8ERU2327 Tryptophan--tRNA ligase O yes N/A 0.751 0.969 0.416 2e-66
Q81TS6329 Tryptophan--tRNA ligase O yes N/A 0.751 0.963 0.406 2e-66
P46579360 Tryptophan--tRNA ligase, yes N/A 0.753 0.883 0.407 9e-66
Q97LD6335 Tryptophan--tRNA ligase O yes N/A 0.734 0.925 0.410 1e-64
Q9K8Y2330 Tryptophan--tRNA ligase O yes N/A 0.751 0.960 0.403 2e-64
>sp|Q9UGM6|SYWM_HUMAN Tryptophan--tRNA ligase, mitochondrial OS=Homo sapiens GN=WARS2 PE=1 SV=1 Back     alignment and function desciption
 Score =  336 bits (861), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 167/322 (51%), Positives = 224/322 (69%), Gaps = 3/322 (0%)

Query: 36  QRIFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKENIQL 95
           +R+FSGIQPTG LHLGNY GA+++W  LQ++ + V++ IVDLHSIT+ Q    L+++I  
Sbjct: 35  KRVFSGIQPTGILHLGNYLGAIESWVRLQDEYDSVLYSIVDLHSITVPQDPAVLRQSILD 94

Query: 96  MAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAELKQSPT 155
           M A LLACGI+P+KSILFQQSQV EHTQL+W+L+C+  + RL H+  +  K  + K   T
Sbjct: 95  MTAVLLACGINPEKSILFQQSQVSEHTQLSWILSCMVRLPRLQHLHQWKAKTTKQKHDGT 154

Query: 156 -GLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQLLPQDE 214
            GL  YPVLQAADILLYK+TH+P G DQ+ ++ L   L Q FN K+ + FP+P+ +    
Sbjct: 155 VGLLTYPVLQAADILLYKSTHVPVGEDQVQHMELVQDLAQGFNKKYGEFFPVPESILT-- 212

Query: 215 SAGKVKSLKDPSKKMSKSDLDSNSKIEITDPPEVIVRKCKKALTDCTSAVTYDPENRPAV 274
           S  KVKSL+DPS KMSKSD D  + + ITD PE IV+K +KA+TD TS VTYDP  R  V
Sbjct: 213 SMKKVKSLRDPSAKMSKSDPDKLATVRITDSPEEIVQKFRKAVTDFTSEVTYDPAGRAGV 272

Query: 275 SNLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSKEHLE 334
           SN++ +HA  T    +++  +   +NT +YKL +AD ++EKF PI+ EIE L   K+HLE
Sbjct: 273 SNIVAVHAAVTGLSVEEVVRRSAGMNTARYKLAVADAVIEKFAPIKREIEKLKLDKDHLE 332

Query: 335 KVLLDGSIRAQAIAVETWDEVK 356
           KVL  GS +A+ +A     EVK
Sbjct: 333 KVLQIGSAKAKELAYTVCQEVK 354

Homo sapiens (taxid: 9606)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 2
>sp|Q9CYK1|SYWM_MOUSE Tryptophan--tRNA ligase, mitochondrial OS=Mus musculus GN=Wars2 PE=2 SV=2 Back     alignment and function description
>sp|Q3T099|SYWM_BOVIN Tryptophan--tRNA ligase, mitochondrial OS=Bos taurus GN=WARS2 PE=2 SV=1 Back     alignment and function description
>sp|Q8R9X8|SYW_THETN Tryptophan--tRNA ligase OS=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=trpS PE=3 SV=1 Back     alignment and function description
>sp|Q7NCG8|SYW_GLOVI Tryptophan--tRNA ligase OS=Gloeobacter violaceus (strain PCC 7421) GN=trpS PE=3 SV=1 Back     alignment and function description
>sp|Q8ERU2|SYW_OCEIH Tryptophan--tRNA ligase OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=trpS PE=3 SV=1 Back     alignment and function description
>sp|Q81TS6|SYW_BACAN Tryptophan--tRNA ligase OS=Bacillus anthracis GN=trpS PE=3 SV=1 Back     alignment and function description
>sp|P46579|SYWM_CAEEL Tryptophan--tRNA ligase, mitochondrial OS=Caenorhabditis elegans GN=wars-2 PE=2 SV=3 Back     alignment and function description
>sp|Q97LD6|SYW_CLOAB Tryptophan--tRNA ligase OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=trpS PE=3 SV=2 Back     alignment and function description
>sp|Q9K8Y2|SYW_BACHD Tryptophan--tRNA ligase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=trpS PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query422
193587122354 PREDICTED: tryptophanyl-tRNA synthetase, 0.812 0.968 0.556 1e-108
321465368388 hypothetical protein DAPPUDRAFT_198965 [ 0.763 0.829 0.592 1e-106
383864167379 PREDICTED: tryptophan--tRNA ligase, mito 0.822 0.915 0.521 1e-105
307172597 740 Tryptophanyl-tRNA synthetase, mitochondr 0.777 0.443 0.545 1e-102
380012732376 PREDICTED: tryptophan--tRNA ligase, mito 0.805 0.904 0.533 1e-102
322787990375 hypothetical protein SINV_07847 [Solenop 0.798 0.898 0.521 1e-101
328788128391 PREDICTED: tryptophanyl-tRNA synthetase, 0.805 0.869 0.527 1e-101
157114308375 tryptophanyl-tRNA synthetase [Aedes aegy 0.805 0.906 0.521 1e-101
156554192386 PREDICTED: tryptophanyl-tRNA synthetase, 0.805 0.880 0.505 1e-101
91083443368 PREDICTED: similar to tryptophanyl-tRNA 0.786 0.902 0.542 2e-99
>gi|193587122|ref|XP_001949319.1| PREDICTED: tryptophanyl-tRNA synthetase, mitochondrial-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/343 (55%), Positives = 249/343 (72%)

Query: 15  KFVNSSGQQIRHYSDHKISFPQRIFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCI 74
           K ++ S Q +  +    + +  R+FSGIQPTGTLHLGNYFGAV  W  LQN+  +VIF I
Sbjct: 4   KKISLSCQTLVRFCHSNVKWKDRVFSGIQPTGTLHLGNYFGAVSKWVQLQNENREVIFSI 63

Query: 75  VDLHSITIKQKHKDLKENIQLMAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTV 134
           VD+HSIT+    K+L++N+ LMAASL+ACGIDP+KS LF QSQVPEHTQL+WVL CL T+
Sbjct: 64  VDMHSITLPYNTKELEKNVLLMAASLIACGIDPEKSTLFLQSQVPEHTQLSWVLGCLTTM 123

Query: 135 NRLNHMPTYVEKCAELKQSPTGLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQ 194
            RL  +P + EK + LK  P GL+LYPVLQAADILLYKAT +P G DQI ++ LA+ L +
Sbjct: 124 PRLGQLPQFKEKSSTLKDVPLGLYLYPVLQAADILLYKATKVPVGEDQIQHLQLAHSLAR 183

Query: 195 LFNNKFDKIFPIPQLLPQDESAGKVKSLKDPSKKMSKSDLDSNSKIEITDPPEVIVRKCK 254
            FN +F   FP+P++L Q   + ++++L+DP KKMSKS  D   +IEITD P+VIV K K
Sbjct: 184 TFNKRFGDTFPVPEVLIQQNCSSRIRNLRDPMKKMSKSHPDPRGRIEITDEPDVIVEKVK 243

Query: 255 KALTDCTSAVTYDPENRPAVSNLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVE 314
           KA+TDCTS +TYDPENRP VS L+T+H+L    LP++IC +   L+TG+YK ++A+ LVE
Sbjct: 244 KAVTDCTSKITYDPENRPGVSTLLTMHSLICGLLPEEICEENSLLDTGRYKHIVAEALVE 303

Query: 315 KFKPIRDEIEYLMKSKEHLEKVLLDGSIRAQAIAVETWDEVKS 357
           KF PIR EI  L+ S E+L K+L +G  +A  IA  TW EV S
Sbjct: 304 KFTPIRQEILKLIDSPEYLSKILQEGQQKANLIASNTWQEVAS 346

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|321465368|gb|EFX76370.1| hypothetical protein DAPPUDRAFT_198965 [Daphnia pulex] Back     alignment and taxonomy information
>gi|383864167|ref|XP_003707551.1| PREDICTED: tryptophan--tRNA ligase, mitochondrial-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|307172597|gb|EFN63956.1| Tryptophanyl-tRNA synthetase, mitochondrial [Camponotus floridanus] Back     alignment and taxonomy information
>gi|380012732|ref|XP_003690431.1| PREDICTED: tryptophan--tRNA ligase, mitochondrial-like [Apis florea] Back     alignment and taxonomy information
>gi|322787990|gb|EFZ13831.1| hypothetical protein SINV_07847 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|328788128|ref|XP_394779.3| PREDICTED: tryptophanyl-tRNA synthetase, mitochondrial-like [Apis mellifera] Back     alignment and taxonomy information
>gi|157114308|ref|XP_001658036.1| tryptophanyl-tRNA synthetase [Aedes aegypti] gi|108877377|gb|EAT41602.1| AAEL006769-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|156554192|ref|XP_001600112.1| PREDICTED: tryptophanyl-tRNA synthetase, mitochondrial-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|91083443|ref|XP_970123.1| PREDICTED: similar to tryptophanyl-tRNA synthetase [Tribolium castaneum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query422
RGD|1593417330 Wars2 "tryptophanyl tRNA synth 0.770 0.984 0.518 1.1e-85
MGI|MGI:1917810360 Wars2 "tryptophanyl tRNA synth 0.770 0.902 0.515 1.7e-84
UNIPROTKB|Q3T099360 WARS2 "Tryptophan--tRNA ligase 0.755 0.886 0.521 2.1e-84
UNIPROTKB|Q9UGM6360 WARS2 "Tryptophan--tRNA ligase 0.755 0.886 0.518 7.2e-84
UNIPROTKB|E2RH50360 WARS2 "Uncharacterized protein 0.755 0.886 0.518 5.8e-82
FB|FBgn0036763 665 CG7441 [Drosophila melanogaste 0.812 0.515 0.462 2e-81
ZFIN|ZDB-GENE-050306-26364 wars2 "tryptophanyl tRNA synth 0.751 0.870 0.489 3.7e-80
UNIPROTKB|E1BZY5329 Gga.27435 "Uncharacterized pro 0.753 0.966 0.482 2.6e-79
UNIPROTKB|B7Z5X7266 WARS2 "Tryptophan--tRNA ligase 0.613 0.973 0.515 2e-65
WB|WBGene00006946360 prx-10 [Caenorhabditis elegans 0.753 0.883 0.407 3.8e-62
RGD|1593417 Wars2 "tryptophanyl tRNA synthetase 2 (mitochondrial)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
 Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
 Identities = 171/330 (51%), Positives = 231/330 (70%)

Query:    36 QRIFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKENIQL 95
             +R+FSGIQPTG  HLGNY GA+++W  LQ + + VI+ IVDLHSIT+ Q    L+++I  
Sbjct:     5 ERVFSGIQPTGIPHLGNYLGAIESWVKLQEEYDTVIYSIVDLHSITVPQDPGILQQSILD 64

Query:    96 MAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAELKQSPT 155
             M A LLACGIDP++SILFQQSQV EHTQL+W+LTC+  + RL H+  +  K A  K   T
Sbjct:    65 MTAVLLACGIDPERSILFQQSQVSEHTQLSWILTCMVRLPRLQHLHQWKAKAARQKHDGT 124

Query:   156 -GLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQLLPQDE 214
              GL  YPVLQAADIL YK+TH+P G DQ+ ++ L   L + FN K+ ++FP+P+ +    
Sbjct:   125 VGLLTYPVLQAADILCYKSTHVPVGEDQVQHMELVQDLARSFNQKYGELFPLPRSILT-- 182

Query:   215 SAGKVKSLKDPSKKMSKSDLDSNSKIEITDPPEVIVRKCKKALTDCTSAVTYDPENRPAV 274
             S  KVKSL+DPS KMSKSD D  + ++ITD PE IVRK +KA+TD TS VTY+P++RP V
Sbjct:   183 SMKKVKSLRDPSAKMSKSDPDKLATVQITDSPEEIVRKFRKAVTDFTSEVTYEPDSRPGV 242

Query:   275 SNLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSKEHLE 334
             SN++ +HA  +    +++      ++T +YKLL+AD ++EKF PIR EIE L   K+HL 
Sbjct:   243 SNMVAIHAAVSGLSVEEVVRNSAGVDTARYKLLVADAVIEKFAPIRSEIEKLKMDKDHLR 302

Query:   335 KVLLDGSIRAQAIAVETWDEVKSAAVGGIL 364
             KVLL GS +A+ +A   ++EVK     GIL
Sbjct:   303 KVLLVGSAKAKELASPVFEEVKKLV--GIL 330
GO:0001570 "vasculogenesis" evidence=IEA;ISO
GO:0004830 "tryptophan-tRNA ligase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005739 "mitochondrion" evidence=IEA;ISO
GO:0006436 "tryptophanyl-tRNA aminoacylation" evidence=IEA
MGI|MGI:1917810 Wars2 "tryptophanyl tRNA synthetase 2 (mitochondrial)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q3T099 WARS2 "Tryptophan--tRNA ligase, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9UGM6 WARS2 "Tryptophan--tRNA ligase, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RH50 WARS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
FB|FBgn0036763 CG7441 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050306-26 wars2 "tryptophanyl tRNA synthetase 2, mitochondrial" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1BZY5 Gga.27435 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|B7Z5X7 WARS2 "Tryptophan--tRNA ligase, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
WB|WBGene00006946 prx-10 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8FRR3SYW_COREF6, ., 1, ., 1, ., 20.38250.77010.9393yesN/A
Q8NSJ4SYW_CORGL6, ., 1, ., 1, ., 20.39310.74880.9159yesN/A
Q7VBM9SYW_PROMA6, ., 1, ., 1, ., 20.38670.75590.9410yesN/A
Q9AC05SYW_CAUCR6, ., 1, ., 1, ., 20.37920.75820.9302yesN/A
Q9UGM6SYWM_HUMAN6, ., 1, ., 1, ., 20.51860.75590.8861yesN/A
Q9K8Y2SYW_BACHD6, ., 1, ., 1, ., 20.40370.75110.9606yesN/A
P67586SYW_BRUME6, ., 1, ., 1, ., 20.35730.76300.9070yesN/A
P67587SYW_BRUSU6, ., 1, ., 1, ., 20.35730.76300.9070yesN/A
Q7V286SYW_PROMP6, ., 1, ., 1, ., 20.37300.75820.9467yesN/A
Q92HR1SYW_RICCN6, ., 1, ., 1, ., 20.39250.75110.9606yesN/A
Q98C31SYW_RHILO6, ., 1, ., 1, ., 20.37460.76300.9070yesN/A
Q8XMQ5SYW_CLOPE6, ., 1, ., 1, ., 20.40.73690.9367yesN/A
Q89W91SYW_BRAJA6, ., 1, ., 1, ., 20.39050.75350.9085yesN/A
Q92SI9SYW_RHIME6, ., 1, ., 1, ., 20.37100.76300.9096yesN/A
Q7NCG8SYW_GLOVI6, ., 1, ., 1, ., 20.38620.77720.9761yesN/A
Q68WR2SYW_RICTY6, ., 1, ., 1, ., 20.37380.75110.9606yesN/A
Q71XG7SYW_LISMF6, ., 1, ., 1, ., 20.38310.75350.9607yesN/A
Q6AGQ7SYW_LEIXX6, ., 1, ., 1, ., 20.36970.72510.9080yesN/A
Q8EK12SYW_SHEON6, ., 1, ., 1, ., 20.39440.74640.9487yesN/A
Q8ERU2SYW_OCEIH6, ., 1, ., 1, ., 20.41610.75110.9694yesN/A
Q9KZA7SYW2_STRCO6, ., 1, ., 1, ., 20.38950.75110.9351yesN/A
Q7VPB2SYW_HAEDU6, ., 1, ., 1, ., 20.36850.74880.9239yesN/A
Q9KNV7SYW_VIBCH6, ., 1, ., 1, ., 20.38250.75820.9467yesN/A
Q7VIP6SYW_HELHP6, ., 1, ., 1, ., 20.39260.75820.9638yesN/A
P43835SYW_HAEIN6, ., 1, ., 1, ., 20.37030.75590.9550yesN/A
Q891C7SYW_CLOTE6, ., 1, ., 1, ., 20.37070.74640.9319yesN/A
Q81TS6SYW_BACAN6, ., 1, ., 1, ., 20.40680.75110.9635yesN/A
Q929H5SYW_LISIN6, ., 1, ., 1, ., 20.37690.75350.9607yesN/A
P46579SYWM_CAEEL6, ., 1, ., 1, ., 20.40720.75350.8833yesN/A
Q8Y577SYW_LISMO6, ., 1, ., 1, ., 20.38940.75350.9607yesN/A
P67591SYW_MYCBO6, ., 1, ., 1, ., 20.39310.75350.9464yesN/A
Q97LD6SYW_CLOAB6, ., 1, ., 1, ., 20.41000.73450.9253yesN/A
Q9CYK1SYWM_MOUSE6, ., 1, ., 1, ., 20.51860.75590.8861yesN/A
Q8R9X8SYW_THETN6, ., 1, ., 1, ., 20.41300.75350.9724yesN/A
Q8YXE4SYW_NOSS16, ., 1, ., 1, ., 20.39440.76060.9582yesN/A
Q7NA61SYW_PHOLL6, ., 1, ., 1, ., 20.37570.76300.9333yesN/A
Q49901SYW_MYCLE6, ., 1, ., 1, ., 20.40490.75110.9241yesN/A
P56396SYW_HELPY6, ., 1, ., 1, ., 20.37770.75110.9723yesN/A
Q82HU1SYW1_STRAW6, ., 1, ., 1, ., 20.40880.74170.9287yesN/A
Q8ZJF2SYW_YERPE6, ., 1, ., 1, ., 20.38150.75350.9298yesN/A
Q3T099SYWM_BOVIN6, ., 1, ., 1, ., 20.52170.75590.8861yesN/A
Q4UL98SYW_RICFE6, ., 1, ., 1, ., 20.38620.75110.9606yesN/A
Q9ZJX4SYW_HELPJ6, ., 1, ., 1, ., 20.38080.75110.9723yesN/A
P67590SYW_MYCTU6, ., 1, ., 1, ., 20.39310.75350.9464yesN/A
Q86A90SYWM_DICDI6, ., 1, ., 1, ., 20.36230.75350.8435yesN/A
P21656SYW_BACSU6, ., 1, ., 1, ., 20.38880.75590.9666yesN/A
Q9ZD76SYW_RICPR6, ., 1, ., 1, ., 20.36760.75110.9606yesN/A
Q7MAE0SYW_WOLSU6, ., 1, ., 1, ., 20.40120.75350.9695yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.1.1.20.914
3rd Layer6.1.10.921

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query422
PRK00927333 PRK00927, PRK00927, tryptophanyl-tRNA synthetase; 1e-140
COG0180314 COG0180, TrpS, Tryptophanyl-tRNA synthetase [Trans 1e-109
cd00806280 cd00806, TrpRS_core, catalytic core domain of tryp 1e-103
PLN02886389 PLN02886, PLN02886, aminoacyl-tRNA ligase 7e-93
TIGR00233327 TIGR00233, trpS, tryptophanyl-tRNA synthetase 2e-87
PRK12282333 PRK12282, PRK12282, tryptophanyl-tRNA synthetase I 2e-69
pfam00579291 pfam00579, tRNA-synt_1b, tRNA synthetases class I 2e-64
PRK12556332 PRK12556, PRK12556, tryptophanyl-tRNA synthetase; 8e-48
PRK12284431 PRK12284, PRK12284, tryptophanyl-tRNA synthetase; 2e-41
PRK12283398 PRK12283, PRK12283, tryptophanyl-tRNA synthetase; 3e-39
cd00395273 cd00395, Tyr_Trp_RS_core, catalytic core domain of 2e-23
PRK12285368 PRK12285, PRK12285, tryptophanyl-tRNA synthetase; 4e-16
PRK08560329 PRK08560, PRK08560, tyrosyl-tRNA synthetase; Valid 5e-13
TIGR00234377 TIGR00234, tyrS, tyrosyl-tRNA synthetase 9e-09
PTZ00348 682 PTZ00348, PTZ00348, tyrosyl-tRNA synthetase; Provi 4e-08
cd00805269 cd00805, TyrRS_core, catalytic core domain of tyro 1e-06
PTZ00126383 PTZ00126, PTZ00126, tyrosyl-tRNA synthetase; Provi 2e-06
COG0162401 COG0162, TyrS, Tyrosyl-tRNA synthetase [Translatio 1e-05
cd00802143 cd00802, class_I_aaRS_core, catalytic core domain 8e-04
PRK12283398 PRK12283, PRK12283, tryptophanyl-tRNA synthetase; 0.002
>gnl|CDD|234866 PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information 
 Score =  402 bits (1037), Expect = e-140
 Identities = 139/328 (42%), Positives = 211/328 (64%), Gaps = 7/328 (2%)

Query: 36  QRIFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKENIQL 95
           +R+ SGIQPTG LHLGNY GA++ W  LQ++ E   FCI DLH++T+ Q  ++L+EN + 
Sbjct: 2   KRVLSGIQPTGKLHLGNYLGAIKNWVELQDEYE-CFFCIADLHALTVPQDPEELRENTRE 60

Query: 96  MAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAELKQS-P 154
           +AA  LACGIDP+KS +F QS VPEH +LAW+L C+  +  L  M  + +K A+ K++  
Sbjct: 61  LAADYLACGIDPEKSTIFVQSHVPEHAELAWILNCITPLGELERMTQFKDKSAKQKENVS 120

Query: 155 TGLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQLLPQDE 214
            GLF YPVL AADILLYKA  +P G DQ  ++ L   + + FNN + ++FP+P+ L    
Sbjct: 121 AGLFTYPVLMAADILLYKADLVPVGEDQKQHLELTRDIARRFNNLYGEVFPVPEPLIPKV 180

Query: 215 SAGKVKSLKDPSKKMSKSDLDSNSKIEITDPPEVIVRKCKKALTDCT--SAVTYDPENRP 272
            A +V  L  P+KKMSKSD + N+ I + D P+ I +K KKA+TD      + YD  N+P
Sbjct: 181 GA-RVMGLDGPTKKMSKSDPNDNNTINLLDDPKTIAKKIKKAVTDSERLREIRYDLPNKP 239

Query: 273 AVSNLITLHALCTNQLPQDICTQVKH--LNTGQYKLLLADVLVEKFKPIRDEIEYLMKSK 330
            VSNL+T+++  + +  +++  + +      G +K  LA+ +VE   PIR+  E L+   
Sbjct: 240 EVSNLLTIYSALSGESIEELEAEYEAGGKGYGDFKKDLAEAVVEFLAPIRERYEELLADP 299

Query: 331 EHLEKVLLDGSIRAQAIAVETWDEVKSA 358
            +L+++L +G+ +A+A+A +T  EV+ A
Sbjct: 300 AYLDEILAEGAEKARAVASKTLKEVREA 327

Length = 333
>gnl|CDD|223258 COG0180, TrpS, Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|173903 cd00806, TrpRS_core, catalytic core domain of tryptophanyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|215478 PLN02886, PLN02886, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|232888 TIGR00233, trpS, tryptophanyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|183400 PRK12282, PRK12282, tryptophanyl-tRNA synthetase II; Reviewed Back     alignment and domain information
>gnl|CDD|216003 pfam00579, tRNA-synt_1b, tRNA synthetases class I (W and Y) Back     alignment and domain information
>gnl|CDD|183592 PRK12556, PRK12556, tryptophanyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237036 PRK12284, PRK12284, tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|183401 PRK12283, PRK12283, tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|173893 cd00395, Tyr_Trp_RS_core, catalytic core domain of tyrosinyl-tRNA and tryptophanyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|237037 PRK12285, PRK12285, tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|236286 PRK08560, PRK08560, tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>gnl|CDD|232889 TIGR00234, tyrS, tyrosyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|173541 PTZ00348, PTZ00348, tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|173902 cd00805, TyrRS_core, catalytic core domain of tyrosinyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|240282 PTZ00126, PTZ00126, tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|223240 COG0162, TyrS, Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|173901 cd00802, class_I_aaRS_core, catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|183401 PRK12283, PRK12283, tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 422
PRK12284431 tryptophanyl-tRNA synthetase; Reviewed 100.0
KOG2713|consensus347 100.0
PLN02886389 aminoacyl-tRNA ligase 100.0
PRK00927333 tryptophanyl-tRNA synthetase; Reviewed 100.0
PRK12556332 tryptophanyl-tRNA synthetase; Provisional 100.0
PRK12283398 tryptophanyl-tRNA synthetase; Reviewed 100.0
COG0180314 TrpS Tryptophanyl-tRNA synthetase [Translation, ri 100.0
PRK12282333 tryptophanyl-tRNA synthetase II; Reviewed 100.0
TIGR00233328 trpS tryptophanyl-tRNA synthetase. This model repr 100.0
cd00806280 TrpRS_core catalytic core domain of tryptophanyl-t 100.0
PRK12285368 tryptophanyl-tRNA synthetase; Reviewed 100.0
PRK08560329 tyrosyl-tRNA synthetase; Validated 100.0
PTZ00126383 tyrosyl-tRNA synthetase; Provisional 100.0
PTZ00348 682 tyrosyl-tRNA synthetase; Provisional 100.0
cd00395273 Tyr_Trp_RS_core catalytic core domain of tyrosinyl 100.0
cd00805269 TyrRS_core catalytic core domain of tyrosinyl-tRNA 100.0
PLN02486383 aminoacyl-tRNA ligase 100.0
PF00579292 tRNA-synt_1b: tRNA synthetases class I (W and Y); 100.0
PRK05912408 tyrosyl-tRNA synthetase; Validated 100.0
PRK13354410 tyrosyl-tRNA synthetase; Provisional 100.0
TIGR00234377 tyrS tyrosyl-tRNA synthetase. This tyrosyl-tRNA sy 100.0
KOG2144|consensus360 100.0
COG0162401 TyrS Tyrosyl-tRNA synthetase [Translation, ribosom 100.0
KOG2145|consensus397 100.0
PTZ00348682 tyrosyl-tRNA synthetase; Provisional 100.0
KOG2623|consensus467 100.0
cd00808239 GluRS_core catalytic core domain of discriminating 99.67
cd00802143 class_I_aaRS_core catalytic core domain of class I 99.49
cd00418230 GlxRS_core catalytic core domain of glutamyl-tRNA 99.1
PRK00750510 lysK lysyl-tRNA synthetase; Reviewed 98.96
cd00674353 LysRS_core_class_I catalytic core domain of class 98.83
PRK05710299 glutamyl-Q tRNA(Asp) synthetase; Reviewed 98.5
TIGR00467515 lysS_arch lysyl-tRNA synthetase, archaeal and spir 98.45
PRK14895513 gltX glutamyl-tRNA synthetase; Provisional 98.42
TIGR00464470 gltX_bact glutamyl-tRNA synthetase, bacterial fami 98.35
PF01921360 tRNA-synt_1f: tRNA synthetases class I (K); InterP 98.33
PRK01406476 gltX glutamyl-tRNA synthetase; Reviewed 98.2
cd00672213 CysRS_core catalytic core domain of cysteinyl tRNA 98.15
TIGR03838272 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe 98.12
cd09287240 GluRS_non_core catalytic core domain of non-discri 98.06
PRK00260463 cysS cysteinyl-tRNA synthetase; Validated 98.06
cd02156105 nt_trans nucleotidyl transferase superfamily. nt_t 97.99
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 97.98
PRK12558445 glutamyl-tRNA synthetase; Provisional 97.92
cd00807238 GlnRS_core catalytic core domain of glutaminyl-tRN 97.91
COG0008472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 97.9
PLN02627535 glutamyl-tRNA synthetase 97.87
PRK12410433 glutamylglutaminyl-tRNA synthetase; Provisional 97.85
PF00749314 tRNA-synt_1c: tRNA synthetases class I (E and Q), 97.77
PRK04156567 gltX glutamyl-tRNA synthetase; Provisional 97.76
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 97.74
PLN03233523 putative glutamate-tRNA ligase; Provisional 97.71
PRK01611507 argS arginyl-tRNA synthetase; Reviewed 97.71
TIGR00435465 cysS cysteinyl-tRNA synthetase. This model finds t 97.68
PTZ00402 601 glutamyl-tRNA synthetase; Provisional 97.59
cd00671212 ArgRS_core catalytic core domain of arginyl-tRNA s 97.49
COG1384521 LysS Lysyl-tRNA synthetase (class I) [Translation, 97.47
PLN02859788 glutamine-tRNA ligase 97.3
PLN02907722 glutamate-tRNA ligase 97.2
PRK14536490 cysS cysteinyl-tRNA synthetase; Provisional 96.81
PRK05347 554 glutaminyl-tRNA synthetase; Provisional 96.33
PF01406300 tRNA-synt_1e: tRNA synthetases class I (C) catalyt 96.31
TIGR00440 522 glnS glutaminyl-tRNA synthetase. This protein is a 96.27
TIGR00463560 gltX_arch glutamyl-tRNA synthetase, archaeal and e 96.24
PTZ00437 574 glutaminyl-tRNA synthetase; Provisional 96.2
PLN02946557 cysteine-tRNA ligase 96.06
PRK14535699 cysS cysteinyl-tRNA synthetase; Provisional 95.99
PRK14534481 cysS cysteinyl-tRNA synthetase; Provisional 95.63
PRK12418384 cysteinyl-tRNA synthetase; Provisional 95.54
PRK14703 771 glutaminyl-tRNA synthetase/YqeY domain fusion prot 95.38
COG0215464 CysS Cysteinyl-tRNA synthetase [Translation, ribos 95.12
COG0162401 TyrS Tyrosyl-tRNA synthetase [Translation, ribosom 94.18
PRK12300 897 leuS leucyl-tRNA synthetase; Reviewed 93.68
COG0143 558 MetG Methionyl-tRNA synthetase [Translation, ribos 93.66
PF09334391 tRNA-synt_1g: tRNA synthetases class I (M); InterP 93.3
PRK00133 673 metG methionyl-tRNA synthetase; Reviewed 93.26
PRK05743 912 ileS isoleucyl-tRNA synthetase; Reviewed 92.15
PLN02224 616 methionine-tRNA ligase 91.36
TIGR00392861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 91.23
cd00818338 IleRS_core catalytic core domain of isoleucyl-tRNA 91.18
cd00817382 ValRS_core catalytic core domain of valyl-tRNA syn 90.96
PRK00390 805 leuS leucyl-tRNA synthetase; Validated 90.43
TIGR00395 938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 89.72
PRK12268 556 methionyl-tRNA synthetase; Reviewed 89.65
PRK11893 511 methionyl-tRNA synthetase; Reviewed 89.46
PF00133601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 89.27
TIGR00396 842 leuS_bact leucyl-tRNA synthetase, eubacterial and 89.13
PLN02610 801 probable methionyl-tRNA synthetase 88.55
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 88.3
PRK11893511 methionyl-tRNA synthetase; Reviewed 87.98
PRK12267 648 methionyl-tRNA synthetase; Reviewed 87.66
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 87.52
COG0495814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 87.07
PRK12267 648 methionyl-tRNA synthetase; Reviewed 86.93
PLN02660284 pantoate--beta-alanine ligase 85.85
PRK00390805 leuS leucyl-tRNA synthetase; Validated 85.83
PRK05729 874 valS valyl-tRNA synthetase; Reviewed 85.53
PRK13804 961 ileS isoleucyl-tRNA synthetase; Provisional 85.46
PLN02843 974 isoleucyl-tRNA synthetase 85.04
TIGR00398 530 metG methionyl-tRNA synthetase. The methionyl-tRNA 84.67
PRK13208800 valS valyl-tRNA synthetase; Reviewed 84.46
TIGR00396842 leuS_bact leucyl-tRNA synthetase, eubacterial and 84.32
TIGR03447411 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- 83.9
PLN02959 1084 aminoacyl-tRNA ligase 83.74
PLN02563963 aminoacyl-tRNA ligase 83.71
PTZ00399 651 cysteinyl-tRNA-synthetase; Provisional 83.56
KOG1149|consensus524 83.41
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 82.89
PLN02563 963 aminoacyl-tRNA ligase 82.3
PRK06039 975 ileS isoleucyl-tRNA synthetase; Reviewed 82.05
TIGR00456566 argS arginyl-tRNA synthetase. This model recognize 81.54
cd00818338 IleRS_core catalytic core domain of isoleucyl-tRNA 81.43
TIGR00018282 panC pantoate--beta-alanine ligase. This family is 80.88
TIGR00422 861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 80.71
KOG1147|consensus 712 80.64
PLN02943 958 aminoacyl-tRNA ligase 80.44
>PRK12284 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information 
Probab=100.00  E-value=1.1e-99  Score=772.94  Aligned_cols=355  Identities=28%  Similarity=0.447  Sum_probs=328.1

Q ss_pred             CcEEEEeecCCCccchhhHHHHHHHHHHHHH-cCCcEEEEeeCceeeccCCCHHHHHHHHHHHHHHHHHcCCCCCceEEE
Q psy3680          35 PQRIFSGIQPTGTLHLGNYFGAVQTWSALQN-KGEDVIFCIVDLHSITIKQKHKDLKENIQLMAASLLACGIDPQKSILF  113 (422)
Q Consensus        35 ~~~i~tGi~PTG~lHLGny~g~i~~~~~lq~-~g~~~~ilIaD~hAlt~~~~~~~i~~~~~~i~a~~lA~Gldp~k~~i~  113 (422)
                      ..+|||||+|||.||||||+|+|++|+++|+ .|++++||||||||+|++.+|+++++++++++++|+|||+||+|++||
T Consensus         2 ~~rvlSGiqPTG~lHLGNylGaik~~v~lq~q~~~~~~~~IADlHAlT~~~dp~~lr~~~~e~aa~~LA~GlDPek~~if   81 (431)
T PRK12284          2 TTRVLTGITTTGTPHLGNYAGAIRPAIAASRQPGVESFYFLADYHALIKCDDPARIQRSTLEIAATWLAAGLDPERVTFY   81 (431)
T ss_pred             ceEEEEEecCCCcchHHHHHHHHHHHHHHHHhCCCcEEEEeechhhccCCCCHHHHHHHHHHHHHHHHHhCCCccceEEE
Confidence            4689999999999999999999999999986 688999999999999988999999999999999999999999999999


Q ss_pred             EcCCCcchhHHHHHHhhccchhhhhcchhHHHHhhhc--------CCCCccchhhHHHhhhhhhccCccEEeecCchhHH
Q psy3680         114 QQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAEL--------KQSPTGLFLYPVLQAADILLYKATHIPAGLDQIHN  185 (422)
Q Consensus       114 ~qSdi~e~~el~w~l~~~~~~~~l~r~~~~K~k~~~~--------~~~~~gl~~YPvLqAaDil~~~a~~vpvG~DQ~~h  185 (422)
                      +||++|+|+||+|+|+|++++++|+|+++||++..+.        +++++|+|+||||||||||+|++|+||||.||+||
T Consensus        82 ~QSdvpeh~EL~wiL~~it~~g~L~Rm~q~K~k~~~~~~~g~~~~~~i~~Gll~YPvLqAADILly~ad~VPVG~DQ~qH  161 (431)
T PRK12284         82 RQSDIPEIPELTWLLTCVAGKGLLNRAHAYKAAVDKNVAAGEDPDAGVTAGLFMYPVLMAADILMFNAHKVPVGRDQIQH  161 (431)
T ss_pred             ECCcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHHhhhccccCcccCcchHHhhchHHHHhhhhhcCCCEEEEcchhHHH
Confidence            9999999999999999999999999999999876421        34799999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccccC-ccCCCCeecccCCCCcccccCCCCCcccccCCCCCCCcEeccCCHHHHHHHhhhhccCCCCcc
Q psy3680         186 INLANHLTQLFNNKFD-KIFPIPQLLPQDESAGKVKSLKDPSKKMSKSDLDSNSKIEITDPPEVIVRKCKKALTDCTSAV  264 (422)
Q Consensus       186 ielaRdia~r~n~~~g-~~f~~P~~li~~~~~~~lp~L~~~~~KMSKS~~n~~s~I~L~Dsp~~I~kKI~~A~tD~~~~~  264 (422)
                      +|||||||+|||+.|| ++|++|++++. ..+++||||+|  +|||||++|   +|+|+|+|++|++||++|+||+.+  
T Consensus       162 lELaRdIA~rFN~~yg~~~F~~Pe~~i~-~~~~~I~gLdg--~KMSKS~~n---~I~L~Ds~~~I~kKI~~A~TDs~~--  233 (431)
T PRK12284        162 IEMARDIAQRFNHLYGGEFFVLPEAVIE-ESVATLPGLDG--RKMSKSYDN---TIPLFAPREELKKAIFSIVTDSRA--  233 (431)
T ss_pred             HHHHHHHHHHHhhhcCCcccCCCccccc-cccccccCCCC--ccccCCCCC---EeeecCCHHHHHHHHhcCCCCCCC--
Confidence            9999999999999997 89999999986 36899999973  699999975   999999999999999999999864  


Q ss_pred             ccCCCCCcchhhHHHHHHhcCC-CCHHHHHHHHh-CCChhHHHHHHHHHHHhhcCcHHHHHHHHhcCHHHHHHHHHhhHH
Q psy3680         265 TYDPENRPAVSNLITLHALCTN-QLPQDICTQVK-HLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSKEHLEKVLLDGSI  342 (422)
Q Consensus       265 ~~~p~~~p~~~~l~~~~~~~t~-~~~eei~~~~~-~~~~~dlK~~Lae~i~~~l~pir~~~~~l~~~~~~l~~iL~~Ga~  342 (422)
                       ..++++|+++|++.||+.|++ .++++++++|. +++|+++|+.|++.|+++|+|+|++|+++++|+++|++||++|++
T Consensus       234 -~~~~~~pe~snLl~i~~~~~~~~~~eel~~~~~~g~~~g~~K~~Lae~i~~~L~PiRer~~~l~~d~~~l~~iL~~Ga~  312 (431)
T PRK12284        234 -PGEPKDTEGSALFQLYQAFATPEETAAFRQALADGIGWGDAKQRLFERIDRELAPMRERYEALIARPADIEDILLAGAA  312 (431)
T ss_pred             -CCCCCCCCcchHHHHHHHhCCcchHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence             233488999999999999985 67899999997 799999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhccCccccccCCccCCCC-CCCccceeEeEecCCcEEEeec
Q psy3680         343 RAQAIAVETWDEVKSAAVGGILTAFGQGTYLGTP-EMDGLLLVSYRWADYQLTLAFD  398 (422)
Q Consensus       343 kAr~iA~~tl~~vr~avgl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  398 (422)
                      |||++|++||++||++|||+.+.+..+.+...++ +.+.|+|+||||+||+||.-+.
T Consensus       313 kAr~~A~~tl~~vr~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (431)
T PRK12284        313 KARRIATPFLAELREAVGLRSLSSAAQAAAAAKKKAAKAPRFKQYREDDGSFYFKLL  369 (431)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhccccccccchhhhhhccchhhhhhccCCcEEEEEe
Confidence            9999999999999999999988886666554444 5678999999999999997654

>KOG2713|consensus Back     alignment and domain information
>PLN02886 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK00927 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12556 tryptophanyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12283 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0180 TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12282 tryptophanyl-tRNA synthetase II; Reviewed Back     alignment and domain information
>TIGR00233 trpS tryptophanyl-tRNA synthetase Back     alignment and domain information
>cd00806 TrpRS_core catalytic core domain of tryptophanyl-tRNA synthetase Back     alignment and domain information
>PRK12285 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK08560 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>PTZ00126 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PTZ00348 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00395 Tyr_Trp_RS_core catalytic core domain of tyrosinyl-tRNA and tryptophanyl-tRNA synthetase Back     alignment and domain information
>cd00805 TyrRS_core catalytic core domain of tyrosinyl-tRNA synthetase Back     alignment and domain information
>PLN02486 aminoacyl-tRNA ligase Back     alignment and domain information
>PF00579 tRNA-synt_1b: tRNA synthetases class I (W and Y); InterPro: IPR002305 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK05912 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>PRK13354 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00234 tyrS tyrosyl-tRNA synthetase Back     alignment and domain information
>KOG2144|consensus Back     alignment and domain information
>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG2145|consensus Back     alignment and domain information
>PTZ00348 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>KOG2623|consensus Back     alignment and domain information
>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase Back     alignment and domain information
>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete Back     alignment and domain information
>PRK14895 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase Back     alignment and domain information
>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information
>cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PRK00260 cysS cysteinyl-tRNA synthetase; Validated Back     alignment and domain information
>cd02156 nt_trans nucleotidyl transferase superfamily Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>PRK12558 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02627 glutamyl-tRNA synthetase Back     alignment and domain information
>PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>PLN03233 putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>PRK01611 argS arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00435 cysS cysteinyl-tRNA synthetase Back     alignment and domain information
>PTZ00402 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02859 glutamine-tRNA ligase Back     alignment and domain information
>PLN02907 glutamate-tRNA ligase Back     alignment and domain information
>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK05347 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>TIGR00440 glnS glutaminyl-tRNA synthetase Back     alignment and domain information
>TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>PTZ00437 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02946 cysteine-tRNA ligase Back     alignment and domain information
>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12418 cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK00133 metG methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>PLN02610 probable methionyl-tRNA synthetase Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02660 pantoate--beta-alanine ligase Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional Back     alignment and domain information
>KOG1149|consensus Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00456 argS arginyl-tRNA synthetase Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>TIGR00018 panC pantoate--beta-alanine ligase Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>KOG1147|consensus Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query422
3prh_A388 Tryptophanyl-Trna Synthetase Val144pro Mutant From 2e-63
1i6m_A328 1.7 High Resolution Experimental Phases For Tryptop 1e-62
1d2r_A326 2.9 A Crystal Structure Of Ligand-Free Tryptophanyl 4e-61
1i6k_A328 1.7 High Resolution Experimental Phases For Tryptop 5e-60
3fi0_A326 Crystal Structure Analysis Of B. Stearothermophilus 5e-60
3n9i_A346 Crystal Structure Of Tryptophanyl-Trna Synthetase F 7e-59
3sz3_A341 Crystal Structure Of Tryptophanyl-Trna Synthetase F 8e-58
2el7_A337 Crystal Structure Of Tryptophanyl-Trna Synthetase F 2e-52
3fhj_F297 Independent Saturation Of Three Trprs Subsites Gene 4e-51
3u1v_A338 X-Ray Structure Of De Novo Design Cysteine Esterase 3e-48
3fhj_A300 Independent Saturation Of Three Trprs Subsites Gene 2e-47
3fhj_B292 Independent Saturation Of Three Trprs Subsites Gene 4e-47
3fhj_E293 Independent Saturation Of Three Trprs Subsites Gene 8e-47
3fhj_D287 Independent Saturation Of Three Trprs Subsites Gene 9e-46
3fhj_C280 Independent Saturation Of Three Trprs Subsites Gene 3e-44
2yy5_A348 Crystal Structure Of Tryptophanyl-Trna Synthetase F 3e-44
2g36_A340 Crystal Structure Of Tryptophanyl-Trna Synthetase ( 4e-43
3m5w_A322 Crystal Structure Of Tryptophanyl-Trna Synthetase F 3e-38
2a4m_A331 Structure Of Trprs Ii Bound To Atp Length = 331 8e-29
1yi8_B351 Crystal Structure Of Tryptophanyl Trrna Synthetase 4e-28
3p0j_A 690 Leishmania Major Tyrosyl-Trna Synthetase In Complex 6e-10
3a04_A372 Crystal Structure Of Tryptophanyl-Trna Synthetase F 6e-09
2cyb_A323 Crystal Structure Of Tyrosyl-Trna Synthetase Comple 1e-08
3p0h_A 690 Leishmania Major Tyrosyl-Trna Synthetase In Complex 5e-08
3jxe_A392 Crystal Structure Of Pyrococcus Horikoshii Tryptoph 4e-05
3vgj_A373 Crystal Of Plasmodium Falciparum Tyrosyl-Trna Synth 1e-04
1j1u_A306 Crystal Structure Of Archaeal Tyrosyl-Trna Syntheta 3e-04
2cyc_A375 Crystal Structure Of Tyrosyl-Trna Synthetase Comple 8e-04
>pdb|3PRH|A Chain A, Tryptophanyl-Trna Synthetase Val144pro Mutant From B. Subtilis Length = 388 Back     alignment and structure 
Iteration: 1

 Score =  239 bits (611), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 126/328 (38%), Positives = 203/328 (61%), Gaps = 5/328 (1%)
Query: 32  ISFPQRIFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKE 91
            +  Q IFSGIQP+G++ LGNY GA++ +  LQ+   +  FCIVD H+IT+ Q   +L++
Sbjct: 32  FTMKQTIFSGIQPSGSVTLGNYIGAMKQFVELQHD-YNSYFCIVDQHAITVPQDRLELRK 90
Query: 92  NIQLMAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAELK 151
           NI+ +AA  LA G+DP+K+ LF QS+VP H Q  W++ C+  +  L  M  + +K    +
Sbjct: 91  NIRNLAALYLAVGLDPEKATLFIQSEVPAHAQAGWMMQCVAYIGELERMTQFKDKSKGNE 150
Query: 152 QSPTGLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQL-L 210
              +GL  YP L AADILLY    +P G DQ  ++ L  +L + FN K++ IF IP++ +
Sbjct: 151 AVVSGLLTYPPLMAADILLYGTDLVPPGEDQKQHLELTRNLAERFNKKYNDIFTIPEVKI 210
Query: 211 PQDESAGKVKSLKDPSKKMSKSDLDSNSKIEITDPPEVIVRKCKKALTDCTSAVTYDPEN 270
           P+     ++ SL DP KKMSKSD +  + I + D P+ + +K K A+TD    V +D EN
Sbjct: 211 PK--VGARIMSLNDPLKKMSKSDPNQKAYITLLDEPKQLEKKIKSAVTDSEGIVKFDKEN 268
Query: 271 RPAVSNLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSK 330
           +P VSNL+T++++  N   +++  + +    G++K  LA+V+V   KPI+D    L++S 
Sbjct: 269 KPGVSNLLTIYSILGNTTIEELEAKYEGKGYGEFKGDLAEVVVNALKPIQDRYYELIES- 327
Query: 331 EHLEKVLLDGSIRAQAIAVETWDEVKSA 358
           E L+++L +G+ RA   A +   ++++A
Sbjct: 328 EELDRILDEGAERANRTANKMLKKMENA 355
>pdb|1I6M|A Chain A, 1.7 High Resolution Experimental Phases For Tryptophanyl-Trna Synthetase Complexed With Tryptophanyl-5'amp Length = 328 Back     alignment and structure
>pdb|1D2R|A Chain A, 2.9 A Crystal Structure Of Ligand-Free Tryptophanyl-Trna Synthetase: Domain Movements Fragment The Adenine Nucleotide Binding Site. Length = 326 Back     alignment and structure
>pdb|1I6K|A Chain A, 1.7 High Resolution Experimental Phases For Tryptophanyl-Trna Synthetase Complexed With Tryptophanyl-5'amp Length = 328 Back     alignment and structure
>pdb|3FI0|A Chain A, Crystal Structure Analysis Of B. Stearothermophilus Tryptophanyl-Trna Synthetase Complexed With Tryptophan, Amp, And Inorganic Phosphate Length = 326 Back     alignment and structure
>pdb|3N9I|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From Yersinia Pestis Co92 Length = 346 Back     alignment and structure
>pdb|3SZ3|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From Vibrio Cholerae With An Endogenous Tryptophan Length = 341 Back     alignment and structure
>pdb|2EL7|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From Thermus Thermophilus Length = 337 Back     alignment and structure
>pdb|3U1V|A Chain A, X-Ray Structure Of De Novo Design Cysteine Esterase Fr29, Northeast Structural Genomics Consortium Target Or52 Length = 338 Back     alignment and structure
>pdb|2YY5|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From Mycoplasma Pneumoniae Length = 348 Back     alignment and structure
>pdb|2G36|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase (Ec 6.1.1.2) (Tryptophan-Trna Ligase)(Trprs) (Tm0492) From Thermotoga Maritima At 2.50 A Resolution Length = 340 Back     alignment and structure
>pdb|3M5W|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From Campylobacter Jejuni Length = 322 Back     alignment and structure
>pdb|2A4M|A Chain A, Structure Of Trprs Ii Bound To Atp Length = 331 Back     alignment and structure
>pdb|1YI8|B Chain B, Crystal Structure Of Tryptophanyl Trrna Synthetase Ii From Deinococcus Radiodurans In Complex With L-Trp Length = 351 Back     alignment and structure
>pdb|3P0J|A Chain A, Leishmania Major Tyrosyl-Trna Synthetase In Complex With Tyrosinol, Triclinic Crystal Form 1 Length = 690 Back     alignment and structure
>pdb|3A04|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Length = 372 Back     alignment and structure
>pdb|2CYB|A Chain A, Crystal Structure Of Tyrosyl-Trna Synthetase Complexed With L-Tyrosine From Archaeoglobus Fulgidus Length = 323 Back     alignment and structure
>pdb|3P0H|A Chain A, Leishmania Major Tyrosyl-Trna Synthetase In Complex With Fisetin, Cubic Crystal Form Length = 690 Back     alignment and structure
>pdb|3JXE|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Tryptophanyl-Trna Synthetase In Complex With Trpamp Length = 392 Back     alignment and structure
>pdb|3VGJ|A Chain A, Crystal Of Plasmodium Falciparum Tyrosyl-Trna Synthetase (Pftyrrs)in Complex With Adenylate Analog Length = 373 Back     alignment and structure
>pdb|1J1U|A Chain A, Crystal Structure Of Archaeal Tyrosyl-Trna Synthetase Complexed With Trna(Tyr) And L-Tyrosine Length = 306 Back     alignment and structure
>pdb|2CYC|A Chain A, Crystal Structure Of Tyrosyl-Trna Synthetase Complexed With L-Tyrosine From Pyrococcus Horikoshii Length = 375 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query422
1i6k_A328 TRPRS, tryptophanyl-tRNA synthetase; class I tRNA 1e-163
3prh_A388 Tryptophanyl-tRNA synthetase; TRPRS, protein biosy 1e-161
3n9i_A346 Tryptophanyl-tRNA synthetase; tryptophan-tRNA liga 1e-158
3sz3_A341 Tryptophanyl-tRNA synthetase; structural genomics, 1e-155
2yy5_A348 Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synt 1e-151
2el7_A337 Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synth 1e-136
3tzl_A322 Tryptophanyl-tRNA synthetase; structural genomics, 1e-129
2g36_A340 Tryptophanyl-tRNA synthetase; TM0492, structural g 1e-123
1yi8_B351 Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2. 1e-122
2j5b_A348 Tyrosyl-tRNA synthetase; ligase, protein biosynthe 4e-83
2cyc_A375 Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacy 8e-80
3p0j_A 690 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 7e-76
3p0j_A690 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 6e-54
3jxe_A392 Tryptophanyl-tRNA synthetase; adenosine triphospha 6e-75
3vgj_A373 Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; 7e-74
1r6u_A437 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 1e-51
2ip1_A432 Tryptophanyl-tRNA synthetase; rossmann fold, struc 2e-49
3hv0_A393 Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-bin 7e-47
3i05_A395 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP 1e-42
1r6t_A477 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 2e-42
3tze_A406 Tryptophanyl-tRNA synthetase; structural genomics, 1e-36
3hzr_A386 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, str 2e-36
2dlc_X394 Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligas 2e-22
3foc_A451 Tryptophanyl-tRNA synthetase; structural genomics, 1e-21
2cya_A364 Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, st 5e-20
2cyb_A323 Tyrosyl-tRNA synthetase; rossmann-fold, structural 6e-17
2zp1_A314 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 8e-17
1n3l_A372 Tyrosyl-tRNA synthetase; rossmann fold AS catalyti 2e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1i6k_A TRPRS, tryptophanyl-tRNA synthetase; class I tRNA synthetase, AARS, induced FIT, ligase; HET: TYM; 1.72A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 1i6l_A* 1i6m_A* 1m83_A* 1mau_A* 1maw_A* 1mb2_A* 2ov4_A* 3fhj_A* 3fi0_A* 1d2r_A 3u1v_A Length = 328 Back     alignment and structure
 Score =  459 bits (1184), Expect = e-163
 Identities = 125/326 (38%), Positives = 198/326 (60%), Gaps = 4/326 (1%)

Query: 36  QRIFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKENIQL 95
           + IFSGIQP+G + +GNY GA++ +  LQ++  +  FCIVD H+IT+ Q   +L++NI+ 
Sbjct: 2   KTIFSGIQPSGVITIGNYIGALRQFVELQHE-YNCYFCIVDQHAITVWQDPHELRQNIRR 60

Query: 96  MAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAELKQSPT 155
           +AA  LA GIDP ++ LF QS+VP H Q AW+L C+  +  L  M  + EK A  +    
Sbjct: 61  LAALYLAVGIDPTQATLFIQSEVPAHAQAAWMLQCIVYIGELERMTQFKEKSAGKEAVSA 120

Query: 156 GLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQLLPQDES 215
           GL  YP L AADILLY    +P G DQ  +I L   L + FN ++ ++F IP+       
Sbjct: 121 GLLTYPPLMAADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRYGELFTIPEARIPKVG 180

Query: 216 AGKVKSLKDPSKKMSKSDLDSNSKIEITDPPEVIVRKCKKALTDCTSAVTYDPENRPAVS 275
           A ++ SL DP+KKMSKSD +  + I + D  + I +K K A+TD    + YD E +P +S
Sbjct: 181 A-RIMSLVDPTKKMSKSDPNPKAYITLLDDAKTIEKKIKSAVTDSEGTIRYDKEAKPGIS 239

Query: 276 NLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSKEHLEK 335
           NL+ +++  + Q  +++  Q +    G +K  LA V++E  +PI++   + M+S+E L++
Sbjct: 240 NLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHWMESEE-LDR 298

Query: 336 VLLDGSIRAQAIAVETWDEVKSAAVG 361
           VL +G+ +A  +A E   +++  A+G
Sbjct: 299 VLDEGAEKANRVASEMVRKMEQ-AMG 323
>3prh_A Tryptophanyl-tRNA synthetase; TRPRS, protein biosynthesis, translation, class I tRNA synth rossman fold, high motif, KMSKS motif; 2.80A {Bacillus subtilis} Length = 388 Back     alignment and structure
>3n9i_A Tryptophanyl-tRNA synthetase; tryptophan-tRNA ligase, csgid, structural genomics, niaid, center for structural genomics infectious diseases; 1.95A {Yersinia pestis} Length = 346 Back     alignment and structure
>3sz3_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, rossmann fold; HET: TRP; 1.50A {Vibrio cholerae o1 biovar el tor} Length = 341 Back     alignment and structure
>2yy5_A Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synthetase, structural genomics, NPPSFA; HET: WSA; 2.55A {Mycoplasma pneumoniae} Length = 348 Back     alignment and structure
>2el7_A Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synthetase, translation, structural GEN NPPSFA; 2.50A {Thermus thermophilus} Length = 337 Back     alignment and structure
>3tzl_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure; HET: ADP TRP; 2.15A {Campylobacter jejuni subsp} PDB: 3m5w_A* Length = 322 Back     alignment and structure
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima} Length = 340 Back     alignment and structure
>1yi8_B Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2.10A {Deinococcus radiodurans} PDB: 1yia_B* 1yid_B* 2a4m_A* Length = 351 Back     alignment and structure
>2j5b_A Tyrosyl-tRNA synthetase; ligase, protein biosynthesis, ATP-binding; HET: TYE; 2.20A {Acanthamoeba polyphaga mimivirus} Length = 348 Back     alignment and structure
>2cyc_A Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacylation, structural genomics; HET: TYR; 2.20A {Pyrococcus horikoshii} Length = 375 Back     alignment and structure
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A* Length = 690 Back     alignment and structure
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A* Length = 690 Back     alignment and structure
>3jxe_A Tryptophanyl-tRNA synthetase; adenosine triphosphate, rossmann fold, crystallography, X-RAY, P. horikoshii, aminoacyl-tRNA synthetase; HET: TYM; 3.00A {Pyrococcus horikoshii} Length = 392 Back     alignment and structure
>3vgj_A Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; HET: YAP; 2.21A {Plasmodium falciparum} Length = 373 Back     alignment and structure
>1r6u_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytic domain, AN recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.00A {Homo sapiens} SCOP: c.26.1.1 PDB: 1ulh_A 2dr2_A* 2ake_A* 1o5t_A Length = 437 Back     alignment and structure
>2ip1_A Tryptophanyl-tRNA synthetase; rossmann fold, structural genomics, PSI-2, protein structure initiative; HET: PG4; 1.80A {Saccharomyces cerevisiae} PDB: 3kt0_A* 3kt3_A* 3kt6_A* 3kt8_A* Length = 432 Back     alignment and structure
>3hv0_A Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding; HET: TRP; 2.42A {Cryptosporidium parvum iowa II} Length = 393 Back     alignment and structure
>3i05_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, LIG nucleotide-binding, protein biosynthesis; 2.80A {Trypanosoma brucei} Length = 395 Back     alignment and structure
>1r6t_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytical domain, recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.10A {Homo sapiens} SCOP: a.16.1.3 c.26.1.1 PDB: 2azx_A* 2quh_A* 2qui_A* 2quj_A* 2quk_A Length = 477 Back     alignment and structure
>3tze_A Tryptophanyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, amino acylation; HET: TRP; 2.60A {Encephalitozoon cuniculi} Length = 406 Back     alignment and structure
>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural GEN pathogenic protozoa, MSGPP, ligase; 3.00A {Entamoeba histolytica} Length = 386 Back     alignment and structure
>2dlc_X Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligase-tRNA complex; HET: 2MG OMG M2G PSU 6IA 5MC 5MU 1MA YMP; 2.40A {Saccharomyces cerevisiae} Length = 394 Back     alignment and structure
>3foc_A Tryptophanyl-tRNA synthetase; structural genomics, giardiasi aminoacyl-tRNA synthetase, ligase; 2.09A {Giardia lamblia atcc 50803} Length = 451 Back     alignment and structure
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix} Length = 364 Back     alignment and structure
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus} Length = 323 Back     alignment and structure
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3qe4_A* 3d6u_A* 3d6v_A* 1u7x_A 3n2y_A* 2hgz_A* Length = 314 Back     alignment and structure
>1n3l_A Tyrosyl-tRNA synthetase; rossmann fold AS catalytic domain, unique anticodon recognit domain, dimer, ligase; 1.18A {Homo sapiens} SCOP: c.26.1.1 PDB: 1q11_A* Length = 372 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query422
3prh_A388 Tryptophanyl-tRNA synthetase; TRPRS, protein biosy 100.0
3sz3_A341 Tryptophanyl-tRNA synthetase; structural genomics, 100.0
3n9i_A346 Tryptophanyl-tRNA synthetase; tryptophan-tRNA liga 100.0
1i6k_A328 TRPRS, tryptophanyl-tRNA synthetase; class I tRNA 100.0
3tzl_A322 Tryptophanyl-tRNA synthetase; structural genomics, 100.0
2yy5_A348 Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synt 100.0
2el7_A337 Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synth 100.0
2g36_A340 Tryptophanyl-tRNA synthetase; TM0492, structural g 100.0
1yi8_B351 Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2. 100.0
3jxe_A392 Tryptophanyl-tRNA synthetase; adenosine triphospha 100.0
3vgj_A373 Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; 100.0
2cyc_A375 Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacy 100.0
2cya_A364 Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, st 100.0
3a04_A372 Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tR 100.0
2j5b_A348 Tyrosyl-tRNA synthetase; ligase, protein biosynthe 100.0
2ip1_A432 Tryptophanyl-tRNA synthetase; rossmann fold, struc 100.0
3p0j_A 690 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 100.0
3tze_A406 Tryptophanyl-tRNA synthetase; structural genomics, 100.0
3foc_A451 Tryptophanyl-tRNA synthetase; structural genomics, 100.0
1h3f_A432 Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA sy 100.0
3hzr_A386 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, str 100.0
2cyb_A323 Tyrosyl-tRNA synthetase; rossmann-fold, structural 100.0
3hv0_A393 Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-bin 100.0
3i05_A395 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP 100.0
1r6u_A437 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 100.0
2yxn_A322 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 100.0
2zp1_A314 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 100.0
2dlc_X394 Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligas 100.0
1r6t_A477 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 100.0
1n3l_A372 Tyrosyl-tRNA synthetase; rossmann fold AS catalyti 100.0
2jan_A432 Tyrosyl-tRNA synthetase; protein biosynthesis, ami 100.0
2pid_A356 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 100.0
1y42_X392 Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tR 100.0
1jil_A420 Tyrrs, tyrosyl-tRNA synthetase; truncation, based 100.0
2ts1_A419 Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30 100.0
3p0j_A690 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 100.0
1nzj_A298 Hypothetical protein YADB; Zn cluster, glutamyl T- 99.29
3afh_A488 Glutamyl-tRNA synthetase 2; protein-substrate comp 99.03
2ja2_A498 Glutamyl-tRNA synthetase; non-discriminating gluta 99.03
1j09_A468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 99.0
3al0_C592 Glutamyl-tRNA(Gln) amidotransferase subunit C, GL 98.91
2cfo_A492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 98.85
2o5r_A481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 98.38
4g6z_A490 Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, 98.31
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 97.9
3aii_A553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 97.88
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 97.84
3tqo_A462 Cysteinyl-tRNA synthetase; protein synthesis, liga 97.83
3h99_A 560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 97.8
4dlp_A 536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 97.73
1qtq_A 553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 97.66
3kfl_A 564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 97.63
4gri_A512 Glutamate--tRNA ligase; structural genomics, seatt 97.58
1irx_A523 Lysyl-tRNA synthetase; beta sandwitch, zinc-bindin 97.58
1li5_A461 Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys 97.51
3c8z_A414 Cysteinyl-tRNA synthetase; cysteine ligase, rossma 97.37
2hz7_A 851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 97.33
3sp1_A501 Cysteinyl-tRNA synthetase; structural genomics, se 97.15
1iq0_A592 Arginyl-tRNA synthetase; riken structural genomics 97.12
2zue_A629 Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase 96.48
1f7u_A607 Arginyl-tRNA synthetase; RNA-protein complex, amin 95.38
3u1f_A 542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 93.42
1rqg_A 722 Methionyl-tRNA synthetase; translation, dimerizati 92.35
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 91.84
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 90.89
2x1l_A 524 Methionyl-tRNA synthetase; nucleotide-binding, pro 90.82
1wz2_A 967 Leucyl-tRNA synthetase; ligase, riken structural g 90.8
1ffy_A 917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 90.49
3u1f_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 90.12
4arc_A 880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 89.24
3fnr_A464 Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX 88.37
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 87.57
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 86.69
4arc_A880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 83.91
2v0c_A878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 83.72
>3prh_A Tryptophanyl-tRNA synthetase; TRPRS, protein biosynthesis, translation, class I tRNA synth rossman fold, high motif, KMSKS motif; 2.80A {Bacillus subtilis} Back     alignment and structure
Probab=100.00  E-value=1.6e-93  Score=726.04  Aligned_cols=349  Identities=36%  Similarity=0.594  Sum_probs=303.3

Q ss_pred             hhhcccchhhhhhhhcc-ccC-CCcE----EEEeecCCCccchhhHHHHHHHHHHHHHcCCcEEEEeeCceeeccCCCHH
Q psy3680          14 KKFVNSSGQQIRHYSDH-KIS-FPQR----IFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHK   87 (422)
Q Consensus        14 ~~~~~~~~~~i~~~~~~-~~~-~~~~----i~tGi~PTG~lHLGny~g~i~~~~~lq~~g~~~~ilIaD~hAlt~~~~~~   87 (422)
                      -+-+++|+++++.+++. +++ +|.+    |||||+|||.+|||||+|+|++|++||+ |++++||||||||+|.+.+++
T Consensus         8 ~~~~~~~hrdld~il~~~e~g~~p~~m~~ri~sG~~PTG~lHLGhyvGal~~~~~LQ~-~~~~~~~IaD~hAlt~~~~~~   86 (388)
T 3prh_A            8 GKPIPNPLLGLDSTENLYFQGIDPFTMKQTIFSGIQPSGSVTLGNYIGAMKQFVELQH-DYNSYFCIVDQHAITVPQDRL   86 (388)
T ss_dssp             ---------------------------CCEEEEEECCCSCCBHHHHHHTHHHHHHTTT-TSEEEEEECHHHHTTSCCCHH
T ss_pred             CCCCCCccCCHHHHHHHHHcCCCCcccCCeEEEeeCCCCcchHHHHHHHHHHHHHHHc-cCcEEEEEecceeeecCCCHH
Confidence            34567788777766665 455 5665    9999999999999999999999999997 899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHcCCCCCceEEEEcCCCcchhHHHHHHhhccchhhhhcchhHHHHhhhcCCCCccchhhHHHhhhh
Q psy3680          88 DLKENIQLMAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAELKQSPTGLFLYPVLQAAD  167 (422)
Q Consensus        88 ~i~~~~~~i~a~~lA~Gldp~k~~i~~qSdi~e~~el~w~l~~~~~~~~l~r~~~~K~k~~~~~~~~~gl~~YPvLqAaD  167 (422)
                      ++++++++++++|+|+|+||+|++||+||+|++|+++.|+|+|.+++++|+|+++||++.+..+++++|+|+||+|||||
T Consensus        87 ~lr~~~~~~aa~~lA~GlDp~kt~if~qS~v~~~~el~w~l~~~~~~~~L~R~~~fk~k~~~~~~~~~g~~~YPvLQAAD  166 (388)
T 3prh_A           87 ELRKNIRNLAALYLAVGLDPEKATLFIQSEVPAHAQAGWMMQCVAYIGELERMTQFKDKSKGNEAVVSGLLTYPPLMAAD  166 (388)
T ss_dssp             HHHHHHHHHHHHHHHTTCCTTTEEEEEGGGSTHHHHHHHHHHTTSCHHHHHTTC----------CCBHHHHSCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCChhHeEEEecccccchHHHHHHHHhhccHHHHHhhhhHhHHhhccCCCcchhHhhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999998876678999999999999999


Q ss_pred             hhccCccEEeecCchhHHHHHHHHHHHHhccccCccCCCCeecccCCCCcccccCCCCCcccccCCCCCCCcEeccCCHH
Q psy3680         168 ILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQLLPQDESAGKVKSLKDPSKKMSKSDLDSNSKIEITDPPE  247 (422)
Q Consensus       168 il~~~a~~vpvG~DQ~~hielaRdia~r~n~~~g~~f~~P~~li~~~~~~~lp~L~~~~~KMSKS~~n~~s~I~L~Dsp~  247 (422)
                      |++|++|+||||.||+||+|+|||||+|||+.||++|++|+++++ ..+++||||+||++|||||++|++|+|+|+|+|+
T Consensus       167 Il~~~ad~vPvG~DQ~~hleltRdia~rfn~~y~~~f~~p~~li~-~~~~~l~gL~dg~~KMSKS~~~~~n~I~L~D~p~  245 (388)
T 3prh_A          167 ILLYGTDLVPPGEDQKQHLELTRNLAERFNKKYNDIFTIPEVKIP-KVGARIMSLNDPLKKMSKSDPNQKAYITLLDEPK  245 (388)
T ss_dssp             HHTTTCCEECCCSSCHHHHHHHHHHHHHHHHHTCSCCCCCEECCC-SCCCCCBCSSCTTSBCCTTCSSTTSCCBTTCCHH
T ss_pred             HHHhCCCEEEechhHHHHHHHHHHHHHHhCcccCCCcccchhhhc-ccccccccCCCCCCccCCCCCCCCCeeecCCCHH
Confidence            999999999999999999999999999999999999999999996 3578999998888899999987779999999999


Q ss_pred             HHHHHhhhhccCCCCccccCCCCCcchhhHHHHHHhcCCCCHHHHHHHHhCCChhHHHHHHHHHHHhhcCcHHHHHHHHh
Q psy3680         248 VIVRKCKKALTDCTSAVTYDPENRPAVSNLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLM  327 (422)
Q Consensus       248 ~I~kKI~~A~tD~~~~~~~~p~~~p~~~~l~~~~~~~t~~~~eei~~~~~~~~~~dlK~~Lae~i~~~l~pir~~~~~l~  327 (422)
                      +|++||++|+||+.+.++++|+++|+++|+++||+.+++.++++++++|.+.+|+++|+.|+++|+++|+|+|++|++++
T Consensus       246 ~I~kKI~ka~TD~~~~~~~~~~~~p~v~~l~~i~~~~~~~~~eel~~~y~g~~~g~lK~~lae~l~~~l~pirer~~~~~  325 (388)
T 3prh_A          246 QLEKKIKSAVTDSEGIVKFDKENKPGVSNLLTIYSILGNTTIEELEAKYEGKGYGEFKGDLAEVVVNALKPIQDRYYELI  325 (388)
T ss_dssp             HHHHHHHTCCCCSSCCCCCCTTTCHHHHHHHHHHHHHHTCCHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHhhccCCCCCcccCCCCCCCCcchHHHHHHhcCCCcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999998788899889999999999999999999999999999889999999999999999999999999999


Q ss_pred             cCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCccc
Q psy3680         328 KSKEHLEKVLLDGSIRAQAIAVETWDEVKSAAVGGILT  365 (422)
Q Consensus       328 ~~~~~l~~iL~~Ga~kAr~iA~~tl~~vr~avgl~~~~  365 (422)
                      +|+ +|++||++|++|||++|++||++||++||+..+.
T Consensus       326 ~~~-~l~~il~~Ga~kA~~~A~~tl~~v~~~~g~~~~~  362 (388)
T 3prh_A          326 ESE-ELDRILDEGAERANRTANKMLKKMENAMGLGRKR  362 (388)
T ss_dssp             TSH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC--
T ss_pred             CCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence            999 6999999999999999999999999999987543
>3sz3_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, rossmann fold; HET: TRP; 1.50A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>3n9i_A Tryptophanyl-tRNA synthetase; tryptophan-tRNA ligase, csgid, structural genomics, niaid, center for structural genomics infectious diseases; 1.95A {Yersinia pestis} SCOP: c.26.1.1 Back     alignment and structure
>1i6k_A TRPRS, tryptophanyl-tRNA synthetase; class I tRNA synthetase, AARS, induced FIT, ligase; HET: TYM; 1.72A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 1i6l_A* 1i6m_A* 1m83_A* 1mau_A* 1maw_A* 1mb2_A* 2ov4_A* 3fhj_A* 3fi0_A* 1d2r_A 3u1v_A Back     alignment and structure
>3tzl_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure; HET: ADP TRP; 2.15A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3m5w_A* Back     alignment and structure
>2yy5_A Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synthetase, structural genomics, NPPSFA; HET: WSA; 2.55A {Mycoplasma pneumoniae} Back     alignment and structure
>2el7_A Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synthetase, translation, structural GEN NPPSFA; 2.50A {Thermus thermophilus} Back     alignment and structure
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima} Back     alignment and structure
>1yi8_B Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2.10A {Deinococcus radiodurans} PDB: 1yia_B* 1yid_B* 2a4m_A* Back     alignment and structure
>3jxe_A Tryptophanyl-tRNA synthetase; adenosine triphosphate, rossmann fold, crystallography, X-RAY, P. horikoshii, aminoacyl-tRNA synthetase; HET: TYM; 3.00A {Pyrococcus horikoshii} Back     alignment and structure
>3vgj_A Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; HET: YAP; 2.21A {Plasmodium falciparum} Back     alignment and structure
>2cyc_A Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacylation, structural genomics; HET: TYR; 2.20A {Pyrococcus horikoshii} Back     alignment and structure
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix} Back     alignment and structure
>3a04_A Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding, protein biosynthesis; 1.97A {Aeropyrum pernix} PDB: 3a05_A* Back     alignment and structure
>2j5b_A Tyrosyl-tRNA synthetase; ligase, protein biosynthesis, ATP-binding; HET: TYE; 2.20A {Acanthamoeba polyphaga mimivirus} Back     alignment and structure
>2ip1_A Tryptophanyl-tRNA synthetase; rossmann fold, structural genomics, PSI-2, protein structure initiative; HET: PG4; 1.80A {Saccharomyces cerevisiae} PDB: 3kt0_A* 3kt3_A* 3kt6_A* 3kt8_A* Back     alignment and structure
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A* Back     alignment and structure
>3tze_A Tryptophanyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, amino acylation; HET: TRP; 2.60A {Encephalitozoon cuniculi} Back     alignment and structure
>3foc_A Tryptophanyl-tRNA synthetase; structural genomics, giardiasi aminoacyl-tRNA synthetase, ligase; 2.09A {Giardia lamblia atcc 50803} Back     alignment and structure
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYE; 2.00A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A* Back     alignment and structure
>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural GEN pathogenic protozoa, MSGPP, ligase; 3.00A {Entamoeba histolytica} Back     alignment and structure
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus} Back     alignment and structure
>3hv0_A Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding; HET: TRP; 2.42A {Cryptosporidium parvum iowa II} SCOP: c.26.1.0 Back     alignment and structure
>3i05_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, LIG nucleotide-binding, protein biosynthesis; 2.80A {Trypanosoma brucei} SCOP: c.26.1.0 Back     alignment and structure
>1r6u_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytic domain, AN recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.00A {Homo sapiens} SCOP: c.26.1.1 PDB: 1ulh_A 2dr2_A* 2ake_A* 1o5t_A Back     alignment and structure
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A* Back     alignment and structure
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3qe4_A* 3d6u_A* 3d6v_A* 1u7x_A 3n2y_A* 2hgz_A* Back     alignment and structure
>2dlc_X Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligase-tRNA complex; HET: 2MG OMG M2G PSU 6IA 5MC 5MU 1MA YMP; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1r6t_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytical domain, recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.10A {Homo sapiens} SCOP: a.16.1.3 c.26.1.1 PDB: 2azx_A* 2quh_A* 2qui_A* 2quj_A* 2quk_A Back     alignment and structure
>1n3l_A Tyrosyl-tRNA synthetase; rossmann fold AS catalytic domain, unique anticodon recognit domain, dimer, ligase; 1.18A {Homo sapiens} SCOP: c.26.1.1 PDB: 1q11_A* Back     alignment and structure
>2jan_A Tyrosyl-tRNA synthetase; protein biosynthesis, aminoacyl-tRNA synthetase, tyrrs, ligase, tyrosine, RNA-binding, ATP-binding; 2.9A {Mycobacterium tuberculosis} Back     alignment and structure
>2pid_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, protein-substrate complex, ATP-BI ligase, mitochondrion, nucleotide-binding, protein biosynth; HET: YSA; 2.20A {Homo sapiens} PDB: 3zxi_A* Back     alignment and structure
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A Back     alignment and structure
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A* Back     alignment and structure
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A Back     alignment and structure
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A* Back     alignment and structure
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* Back     alignment and structure
>3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* Back     alignment and structure
>2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Back     alignment and structure
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Back     alignment and structure
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Back     alignment and structure
>4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis} Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Back     alignment and structure
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii} Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Back     alignment and structure
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Back     alignment and structure
>4gri_A Glutamate--tRNA ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, aminoacyl-tRNA synthetase; HET: GLU; 2.60A {Borrelia burgdorferi} Back     alignment and structure
>1irx_A Lysyl-tRNA synthetase; beta sandwitch, zinc-binding structure, rossmann fold, alpha-helix CAGE; 2.60A {Pyrococcus horikoshii} SCOP: a.97.1.2 c.26.1.1 Back     alignment and structure
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B Back     alignment and structure
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis} Back     alignment and structure
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>3sp1_A Cysteinyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, LYME disease; HET: AMP; 2.55A {Borrelia burgdorferi} Back     alignment and structure
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Back     alignment and structure
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Back     alignment and structure
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Back     alignment and structure
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Back     alignment and structure
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Back     alignment and structure
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 422
d1i6la_326 c.26.1.1 (A:) Tryptophanyl-tRNA synthetase (TrpRS) 3e-86
d1r6ta2386 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase ( 2e-48
d1n3la_339 c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Hum 6e-45
d1j1ua_306 c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Arc 1e-27
d1h3fa1343 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) 7e-16
>d1i6la_ c.26.1.1 (A:) Tryptophanyl-tRNA synthetase (TrpRS) {Bacillus stearothermophilus [TaxId: 1422]} Length = 326 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Tryptophanyl-tRNA synthetase (TrpRS)
species: Bacillus stearothermophilus [TaxId: 1422]

 Score =  263 bits (674), Expect = 3e-86
 Identities = 124/323 (38%), Positives = 196/323 (60%), Gaps = 3/323 (0%)

Query: 36  QRIFSGIQPTGTLHLGNYFGAVQTWSALQNKGEDVIFCIVDLHSITIKQKHKDLKENIQL 95
           + IFSGIQP+G + +GNY GA++ +  LQ++  +  FCIVD H+IT+ Q   +L++NI+ 
Sbjct: 2   KTIFSGIQPSGVITIGNYIGALRQFVELQHEY-NCYFCIVDQHAITVWQDPHELRQNIRR 60

Query: 96  MAASLLACGIDPQKSILFQQSQVPEHTQLAWVLTCLCTVNRLNHMPTYVEKCAELKQSPT 155
           +AA  LA GIDP ++ LF QS+VP H Q AW+L C+  +  L  M  + EK A  +    
Sbjct: 61  LAALYLAVGIDPTQATLFIQSEVPAHAQAAWMLQCIVYIGELERMTQFKEKSAGKEAVSA 120

Query: 156 GLFLYPVLQAADILLYKATHIPAGLDQIHNINLANHLTQLFNNKFDKIFPIPQLLPQDES 215
           GL  YP L AADILLY    +P G DQ  +I L   L + FN ++ ++F IP+       
Sbjct: 121 GLLTYPPLMAADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRYGELFTIPEARIPKVG 180

Query: 216 AGKVKSLKDPSKKMSKSDLDSNSKIEITDPPEVIVRKCKKALTDCTSAVTYDPENRPAVS 275
           A ++ SL DP+KKMSKSD +  + I + D  + I +K K A+TD    + YD E +P +S
Sbjct: 181 A-RIMSLVDPTKKMSKSDPNPKAYITLLDDAKTIEKKIKSAVTDSEGTIRYDKEAKPGIS 239

Query: 276 NLITLHALCTNQLPQDICTQVKHLNTGQYKLLLADVLVEKFKPIRDEIEYLMKSKEHLEK 335
           NL+ +++  + Q  +++  Q +    G +K  LA V++E  +PI++   + M+S+E L++
Sbjct: 240 NLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHWMESEE-LDR 298

Query: 336 VLLDGSIRAQAIAVETWDEVKSA 358
           VL +G+ +A  +A E   +++ A
Sbjct: 299 VLDEGAEKANRVASEMVRKMEQA 321
>d1r6ta2 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]} Length = 386 Back     information, alignment and structure
>d1n3la_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapiens) [TaxId: 9606]} Length = 339 Back     information, alignment and structure
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 306 Back     information, alignment and structure
>d1h3fa1 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophilus [TaxId: 274]} Length = 343 Back     information, alignment and structure