Diaphorina citri psyllid: psy3755

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690--
MFRFILKSFKYGSYKISIEIGEIARQATSSVLVSIEDTVILATVVSCKDPTSTYNFFPLTVDYIEKAYAAGRIPGSFFKREGKPSERETIISRLIDRPIRPLFPEGYLNEIQIVVYVLSVNPQIDPDIASIIGVSTALSISELPFLGPLGVAKVGYIDGKYILNPTTEQLKKSHLDLLVAGTEKAIITVESESKQLPEDIILNAIIFGHEKMKIAINAINELVQNVGQKKVNWDPIVKDKTLISKIINISEHKIRKAYQIKNKQIRDLTFKNISKDIYSSLIDNENLTIDINDINCILYDLESKIIRKQILDKGLRIDNRGVNDIRPISIRTGILPRTHGSSLFTRGDTQALVVATLGTSRDEQKIDALMGEFTDSFMLHYNMPPFATGDIGRIGVPKRREIGHGRLAKRALLPVLPNNNKFNYSIRLVSEITESNGSSSMASVCGGCLALLDAGVPISEHVAGIAMGLIKDGEKVVILSDILGDEDRCGDMDFKVAGTVNGITALQMDIKIFGITYDIIQIALYKAKKGLSYILEKMKTEVPKCKNELSKFAPRLITIKIDPSKIRDVIGKGGSTIRTLTEETGTQIDINDEGIITIASFNSVSGQEAKRRIEKLTESVQIGKVYTGIVLRLFDFGAIIRILSGKDGLLHISQISSKRVNIITDFLKENQKVRVKVLGIDDRGRIKLSMIY
ccccEEEEEEEccCEEEEEccHHccccccEEEEEEccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccEEEEEEEEEcccccccHHHHHHHHHHHHHHccccccccEEEEEEEEEccEEEEcccHHHHHcccccEEEEEcccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEcccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccEEEEEEcccccccccHHHHHHHHHHHcHHccccccccccHHccccEEEcccEEEEEccccccccccccccccccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCEEEEEEcccccccccccccHHHHHHHHHcccEEccccccEEEEEEccHHHHHHHHHHHHHHHcccccccEEEEEEEEEEEcEEEEEEccccccEEEEcccccccccccccccccccEEEEEEEEEcccccEEEEEEc
*FRFILKSFKYGSYKISIEIGEIARQATSSVLVSIEDTVILATVVSCKDPTSTYNFFPLTVDYIEKAYAAGRIPGSFFKREGKPSERETIISRLIDRPIRPLFPEGYLNEIQIVVYVLSVNPQIDPDIASIIGVSTALSISELPFLGPLGVAKVGYIDGKYILNPTTEQLKKSHLDLLVAGTEKAIITVESESKQLPEDIILNAIIFGHEKMKIAINAINELVQNVGQKKVNWDPIVKDKTLISKIINISEHKIRKAYQIKNKQIRDLTFKNISKDIYSSLIDNENLTIDINDINCILYDLESKIIRKQILDKGLRIDNRGVNDIRPISIRTGILPRTHGSSLFTRGDTQALVVATLGTSRDEQKIDALMGEFTDSFMLHYNMPPFATGDIGRIGVPKRREIGHGRLAKRALLPVLPNNNKFNYSIRLVSEITESNGSSSMASVCGGCLALLDAGVPISEHVAGIAMGLIKDGEKVVILSDILGDEDRCGDMDFKVAGTVNGITALQMDIKIFGITYDIIQIALYKAKKGLSYILEKMKTEVPKCKNELSKFAPRLITIKIDPSKIRDVIGKGGSTIRTLTEETGTQIDINDEGIITIASFNSVSGQEAKRRIEKLTESVQIGKVYTGIVLRLFDFGAIIRILSGKDGLLHISQISSKRVNIITDFLKENQKVRVKVLGIDDRGRIKLSMIY
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MFRFILKSFKYGSYKISIEIGEIARQATSSVLVSIEDTVILATVVSCKDPTSTYNFFPLTVDYIEKAYAAGRIPGSFFKREGKPSERETIISRLIDRPIRPLFPEGYLNEIQIVVYVLSVNPQIDPDIASIIGVSTALSISELPFLGPLGVAKVGYIDGKYILNPTTEQLKKSHLDLLVAGTEKAIITVESESKQLPEDIILNAIIFGHEKMKIAINAINELVQNVGQKKVNWDPIVKDKTLISKIINISEHKIRKAYQIKNKQIRDLTFKNISKDIYSSLIDNENLTIDINDINCILYDLESKIIRKQILDKGLRIDNRGVNDIRPISIRTGILPRTHGSSLFTRGDTQALVVATLGTSRDEQKIDALMGEFTDSFMLHYNMPPFATGDIGRIGVPKRREIGHGRLAKRALLPVLPNNNKFNYSIRLVSEITESNGSSSMASVCGGCLALLDAGVPISEHVAGIAMGLIKDGEKVVILSDILGDEDRCGDMDFKVAGTVNGITALQMDIKIFGITYDIIQIALYKAKKGLSYILEKMKTEVPKCKNELSKFAPRLITIKIDPSKIRDVIGKGGSTIRTLTEETGTQIDINDEGIITIASFNSVSGQEAKRRIEKLTESVQIGKVYTGIVLRLFDFGAIIRILSGKDGLLHISQISSKRVNIITDFLKENQKVRVKVLGIDDRGRIKLSMIY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Polyribonucleotide nucleotidyltransferase Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3'- to 5'-direction.very confidentA2S463
Polyribonucleotide nucleotidyltransferase Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3'- to 5'-direction.very confidentQ62IN1
Polyribonucleotide nucleotidyltransferase Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3'- to 5'-direction.very confidentA1W4L8

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0016020 [CC]membraneconfidentGO:0005575
GO:0005829 [CC]cytosolconfidentGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0035438 [MF]cyclic-di-GMP bindingconfidentGO:0043168, GO:0030551, GO:0019001, GO:0097159, GO:0000166, GO:0036094, GO:0032561, GO:0003674, GO:0032553, GO:0032555, GO:0017076, GO:0043167, GO:1901363, GO:1901265, GO:0005488
GO:0004654 [MF]polyribonucleotide nucleotidyltransferase activityprobableGO:0016772, GO:0016779, GO:0003674, GO:0016740, GO:0003824
GO:0042802 [MF]identical protein bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0071042 [BP]nuclear polyadenylation-dependent mRNA catabolic processprobableGO:0071047, GO:0090304, GO:0034641, GO:0006807, GO:0043632, GO:0043633, GO:1901360, GO:1901361, GO:0006139, GO:1901575, GO:0044265, GO:0044260, GO:0071704, GO:0006401, GO:0006402, GO:0044238, GO:0009987, GO:0006725, GO:0046700, GO:0008150, GO:0008152, GO:0034655, GO:0009056, GO:0009057, GO:0044248, GO:0046483, GO:0016070, GO:0016071, GO:0044270, GO:0044237, GO:0043170, GO:0019439
GO:0061014 [BP]positive regulation of mRNA catabolic processprobableGO:0009896, GO:0009894, GO:0009893, GO:0031329, GO:0031325, GO:0031323, GO:0050789, GO:0080090, GO:0010604, GO:0019219, GO:0065007, GO:0048518, GO:0045935, GO:0060255, GO:0031331, GO:0061013, GO:0050794, GO:0008150, GO:0051171, GO:0051173, GO:0019222, GO:0051252, GO:0051254, GO:0048522
GO:0070207 [BP]protein homotrimerizationprobableGO:0051259, GO:0022607, GO:0070206, GO:0071822, GO:0070271, GO:0043933, GO:0006461, GO:0051260, GO:0016043, GO:0065003, GO:0044085, GO:0008150, GO:0071840
GO:0035458 [BP]cellular response to interferon-betaprobableGO:0051716, GO:0034097, GO:0071345, GO:0050896, GO:0009987, GO:0008150, GO:0071310, GO:0044763, GO:0070887, GO:0042221, GO:0010033, GO:0044699, GO:0035456
GO:0045926 [BP]negative regulation of growthprobableGO:0008150, GO:0048519, GO:0040008, GO:0065007, GO:0050789
GO:0005618 [CC]cell wallprobableGO:0005575, GO:0071944, GO:0044464, GO:0005623, GO:0030312
GO:2000627 [BP]positive regulation of miRNA catabolic processprobableGO:0009896, GO:0009894, GO:0009893, GO:0031329, GO:0031325, GO:0031323, GO:0050789, GO:0080090, GO:0010604, GO:0019219, GO:0065007, GO:0048518, GO:2000625, GO:0045935, GO:0060255, GO:0031331, GO:2000628, GO:0050794, GO:0008150, GO:0051171, GO:0051173, GO:0019222, GO:0051252, GO:0051254, GO:2000630, GO:0048522
GO:0035198 [MF]miRNA bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723
GO:0000962 [BP]positive regulation of mitochondrial RNA catabolic processprobableGO:0009896, GO:0009894, GO:0009893, GO:0031329, GO:0031325, GO:0031323, GO:0050789, GO:0080090, GO:0010604, GO:0000960, GO:0019219, GO:0065007, GO:0048518, GO:0045935, GO:0060255, GO:0031331, GO:0050794, GO:0008150, GO:0051171, GO:0051173, GO:0019222, GO:0051252, GO:0051254, GO:0048522
GO:0000965 [BP]mitochondrial RNA 3'-end processingprobableGO:0090304, GO:0034641, GO:0006807, GO:0007005, GO:0044699, GO:0006139, GO:0044260, GO:1901360, GO:0000963, GO:0016043, GO:0071704, GO:0010467, GO:0071840, GO:0006996, GO:0009987, GO:0006725, GO:0031123, GO:0044763, GO:0008152, GO:0046483, GO:0016070, GO:0044238, GO:0044237, GO:0043170, GO:0008150, GO:0000959, GO:0006396
GO:0000964 [BP]mitochondrial RNA 5'-end processingprobableGO:0090304, GO:0034641, GO:0006807, GO:0007005, GO:0044699, GO:0006139, GO:0044260, GO:1901360, GO:0000963, GO:0016043, GO:0071704, GO:0010467, GO:0071840, GO:0000966, GO:0006996, GO:0009987, GO:0006725, GO:0044763, GO:0008152, GO:0046483, GO:0016070, GO:0044238, GO:0044237, GO:0043170, GO:0008150, GO:0000959, GO:0006396
GO:0005758 [CC]mitochondrial intermembrane spaceprobableGO:0005737, GO:0005575, GO:0043231, GO:0043229, GO:0031970, GO:0044464, GO:0044444, GO:0005739, GO:0031975, GO:0044446, GO:0005740, GO:0031967, GO:0031974, GO:0044424, GO:0005623, GO:0005622, GO:0043227, GO:0043226, GO:0044422, GO:0044429
GO:0008266 [MF]poly(U) RNA bindingprobableGO:0097159, GO:0003727, GO:0003674, GO:0003723, GO:0003676, GO:0008187, GO:1901363, GO:0005488
GO:0045025 [CC]mitochondrial degradosomeprobableGO:0005737, GO:0043234, GO:0000178, GO:0032991, GO:0043231, GO:0043229, GO:0044464, GO:0000177, GO:0005739, GO:0005622, GO:0044446, GO:0044444, GO:0044429, GO:0005575, GO:0044424, GO:0005623, GO:0043227, GO:0043226, GO:0044422
GO:0035928 [BP]rRNA import into mitochondrionprobableGO:0015931, GO:0051029, GO:0044699, GO:0071705, GO:0071702, GO:0006403, GO:0006810, GO:0009987, GO:0044765, GO:0044763, GO:0051649, GO:0006839, GO:0051236, GO:0051234, GO:0051179, GO:0051641, GO:0050658, GO:0033036, GO:0046907, GO:0050657, GO:0008150, GO:0035927
GO:0034599 [BP]cellular response to oxidative stressprobableGO:0051716, GO:0033554, GO:0050896, GO:0009987, GO:0008150, GO:0006950, GO:0044763, GO:0070887, GO:0042221, GO:0006979, GO:0044699
GO:0000958 [BP]mitochondrial mRNA catabolic processprobableGO:0090304, GO:0034641, GO:0006807, GO:1901360, GO:1901361, GO:0006139, GO:1901575, GO:0044265, GO:0044260, GO:0071704, GO:0006401, GO:0006402, GO:0044238, GO:0009987, GO:0006725, GO:0046700, GO:0008150, GO:0008152, GO:0034655, GO:0009056, GO:0009057, GO:0044248, GO:0046483, GO:0016070, GO:0016071, GO:0044270, GO:0044237, GO:0043170, GO:0000957, GO:0019439, GO:0000959
GO:0000175 [MF]3'-5'-exoribonuclease activityprobableGO:0016787, GO:0008408, GO:0016796, GO:0004518, GO:0004527, GO:0004540, GO:0004532, GO:0016788, GO:0003824, GO:0016896, GO:0003674
GO:0034046 [MF]poly(G) RNA bindingprobableGO:0097159, GO:0070717, GO:0003727, GO:0003674, GO:0003723, GO:0003676, GO:1901363, GO:0005488
GO:0071850 [BP]mitotic cell cycle arrestprobableGO:0044699, GO:0045786, GO:0051726, GO:0008150, GO:0009987, GO:0050794, GO:0007050, GO:0065007, GO:0022402, GO:0007049, GO:0048519, GO:0044763, GO:0050789, GO:0048523
GO:2000772 [BP]regulation of cellular senescenceprobableGO:0090342, GO:0050793, GO:0080134, GO:0080135, GO:0048583, GO:0050794, GO:0065007, GO:0008150, GO:0050789
GO:0097222 [BP]mitochondrial mRNA polyadenylationprobableGO:0090304, GO:0034641, GO:0006807, GO:0043631, GO:1901360, GO:0006139, GO:0044260, GO:0071704, GO:0010467, GO:0044238, GO:0031124, GO:0009987, GO:0006725, GO:0031123, GO:0008150, GO:0008152, GO:0046483, GO:0016070, GO:0016071, GO:0044237, GO:0043170, GO:0006378, GO:0006396, GO:0006397
GO:0003729 [MF]mRNA bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.7.-.-Transferring phosphorous-containing groups.probable
2.7.7.-Nucleotidyltransferases.probable
2.7.7.8Polyribonucleotide nucleotidyltransferase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3CDI, chain A
Confidence level:very confident
Coverage over the Query: 2-359,373-543
View the alignment between query and template
View the model in PyMOL