Diaphorina citri psyllid: psy3863


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-----
MDVRLNEDSVSAFVSIMRGCDNMCTYCIVPFTRGRERSRPMQSILDEVRALSDKVYFEVFGCQMNVNDTEVVWSILKSSGYSKVNHPREADVILVMTCAIRENAEGKVWDRLRFYRSMKQIHKKHRTFPLKIGVLGCMAERLKKSLLEKEQALDLVAGPDSYKDLPRLLALTYSNQTAINVLLSLDETYADITPKAVSTDGRRSIYVDGRWSIYVDGRWRRKLGQQMVDGRSMSMDDGGGASMSSRQCGRFQSTLIDGHRLCVTQLYLTNQDYPIPRKIRNSSLF
cccccccccccEEEEEccccccccccEEcccccccccccccHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHcccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEcHHHHHHHHHHHHHcccccEEEccccccHHHHHHHHHHccccEEEEEcccccccccccccccccccccEEEEEEcccccccccccccccHHHHHHHHHHHHcccCEEEcccccccccccccccccccHHHHHHcccccccccCCcccccc
*******DSVSAFVSIMRGCDNMCTYCIVPFTRGRERSRPMQSILDEVRALSDKVYFEVFGCQMNVNDTEVVWSILKSSGYSKVNHPREADVILVMTCAIRENAEGKVWDRLRFYRSMKQIHKKHRTFPLKIGVLGCMAERLKKSLLEKEQALDLVAGPDSYKDLPRLLALTYSNQTAINVLLSLDETYADITPKAVSTDGRRSIYVDGRWSIYVDGRWRRKLGQQMVDGRSMSMDDGGGASMSSRQCGRFQSTLIDGHRLCVTQLYLTNQDYPIPRKIRNSSL*
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MDVRLNEDSVSAFVSIMRGCDNMCTYCIVPFTRGRERSRPMQSILDEVRALSDKVYFEVFGCQMNVNDTEVVWSILKSSGYSKVNHPREADVILVMTCAIRENAEGKVWDRLRFYRSMKQIHKKHRTFPLKIGVLGCMAERLKKSLLEKEQALDLVAGPDSYKDLPRLLALTYSNQTAINVLLSLDETYADITPKAVSTDGRRSIYVDGRWSIYVDGRWRRKLGQQMVDGRSMSMDDGGGASMSSRQCGRFQSTLIDGHRLCVTQLYLTNQDYPIPRKIRNSSLF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
CDK5 regulatory subunit-associated protein 1 Specifically inhibits CDK5 activation by CDK5R1.confidentQ96SZ6
CDK5RAP1-like protein Potential regulator of CDK5 activity.confidentQ9VGZ1
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.confidentB3ES11

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0045736 [BP]negative regulation of cyclin-dependent protein serine/threonine kinase activityprobableGO:0033673, GO:0043549, GO:0019220, GO:0080090, GO:0019222, GO:0044092, GO:0031324, GO:0031323, GO:0009892, GO:0071901, GO:0071900, GO:0043086, GO:0051248, GO:0045786, GO:0051348, GO:0051246, GO:0050789, GO:0065007, GO:0031399, GO:0048519, GO:0065009, GO:0006469, GO:0045936, GO:0060255, GO:0045859, GO:0050794, GO:0051174, GO:0032268, GO:0008150, GO:0010605, GO:0042325, GO:0032269, GO:0042326, GO:0050790, GO:0051726, GO:0010563, GO:0031400, GO:0051338, GO:0001933, GO:0001932, GO:0000079, GO:0048523
GO:0032403 [MF]protein complex bindingprobableGO:0003674, GO:0005488, GO:0005515

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2QGQ, chain A
Confidence level:confident
Coverage over the Query: 8-20,34-81
View the alignment between query and template
View the model in PyMOL
Template: 2QGQ, chain A
Confidence level:confident
Coverage over the Query: 202-277
View the alignment between query and template
View the model in PyMOL
Template: 2YXB, chain A
Confidence level:probable
Coverage over the Query: 53-171
View the alignment between query and template
View the model in PyMOL