Diaphorina citri psyllid: psy3914

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850--
FSRLYRLPKQFTVNKNKVKNIDDDKALTSEVVDIRLSSSPKMWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKIDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQVSENPSLRESMEADVHTATPSLSNAAATWADWAVTAVTSKFYRSQSETLKTSRGPTRPSGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSASKGESMSDYDETPWESETWGDMESSSNDTTKVGVLDPTSSQTTERQGGSDGGDGWDLDDWRSLEDTPSPSMPPPLQPSQSWAMSNSLSAMSLQENGLTSPSSDVNSTGGWEDTEWSPIEETEPSIKMEESRKRREEKKMARQKELEAKRAAKQSGGPLKLGAKKL
cccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEcccccHHHHHHHHHHHHHcccccEEEEEccCCcccccEEEEEEEEcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEcccccEEEEccccEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHcccccccccHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccccHHHHHHHHccccccccHHHHHHHcccccHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccEEHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcHHHHHHHHHHHHHHHHHccccccccccccccc
*************************ALTSEVVDIRLSSSPKMWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQS*******NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKIDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLG*******************************************************************************************************************************************************************************************************************************************************************************
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FSRLYRLPKQFTVNKNKVKNIDDDKALTSEVVDIRLSSSPKMWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKIDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQVSENPSLRESMEADVHTATPSLSNAAATWADWAVTAVTSKFYRSQSETLKTSRGPTRPSGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSASKGESMSDYDETPWESETWGDMESSSNDTTKVGVLDPTSSQTTERQGGSDGGDGWDLDDWRSLEDTPSPSMPPPLQPSQSWAMSNSLSAMSLQENGLTSPSSDVNSTGGWEDTEWSPIEETEPSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSGGPLKLGAKKL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
N-terminal kinase-like protein Regulates COPI-mediated retrograde traffic. Has no detectable kinase activity in vitro.confidentQ5M9F8
N-terminal kinase-like protein Regulates COPI-mediated retrograde traffic. Has no detectable kinase activity in vitro.confidentQ9EQC5
N-terminal kinase-like protein confidentQ28FH2

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0006890 [BP]retrograde vesicle-mediated transport, Golgi to ERprobableGO:0009987, GO:0016192, GO:0046907, GO:0048193, GO:0006810, GO:0044765, GO:0008150, GO:0051649, GO:0044763, GO:0051234, GO:0051179, GO:0044699, GO:0051641
GO:0005643 [CC]nuclear poreprobableGO:0005635, GO:0031975, GO:0043229, GO:0043227, GO:0043226, GO:0031224, GO:0044446, GO:0046930, GO:0016021, GO:0016020, GO:0031967, GO:0012505, GO:0043234, GO:0032991, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044428, GO:0044424, GO:0044425, GO:0005634, GO:0044422
GO:0006409 [BP]tRNA export from nucleusprobableGO:0015931, GO:0051169, GO:0051168, GO:0051641, GO:0044699, GO:0071705, GO:0071702, GO:0033036, GO:0006405, GO:0009987, GO:0006810, GO:0006913, GO:0051031, GO:0044765, GO:0008150, GO:0051649, GO:0051236, GO:0051234, GO:0051179, GO:0016482, GO:0050658, GO:0006403, GO:0046907, GO:0050657, GO:0044763
GO:0030126 [CC]COPI vesicle coatprobableGO:0012506, GO:0043229, GO:0030117, GO:0005622, GO:0030135, GO:0043226, GO:0030137, GO:0005737, GO:0005575, GO:0030660, GO:0030663, GO:0030662, GO:0016023, GO:0031410, GO:0016020, GO:0031988, GO:0044433, GO:0044431, GO:0031982, GO:0048475, GO:0005794, GO:0005798, GO:0030659, GO:0012505, GO:0043227, GO:0030120, GO:0031090, GO:0043234, GO:0032991, GO:0043231, GO:0044464, GO:0005623, GO:0000139, GO:0044446, GO:0044444, GO:0044424, GO:0044425, GO:0044422
GO:0005801 [CC]cis-Golgi networkprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0005793 [CC]endoplasmic reticulum-Golgi intermediate compartmentprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0000049 [MF]tRNA bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1B3U, chain A
Confidence level:very confident
Coverage over the Query: 330-586
View the alignment between query and template
View the model in PyMOL
Template: 3QD2, chain B
Confidence level:very confident
Coverage over the Query: 55-316
View the alignment between query and template
View the model in PyMOL
Template: 2ACX, chain A
Confidence level:confident
Coverage over the Query: 43-322,333-371
View the alignment between query and template
View the model in PyMOL
Template: 3LVG, chain D
Confidence level:probable
Coverage over the Query: 809-851
View the alignment between query and template
View the model in PyMOL