Psyllid ID: psy3914
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 852 | 2.2.26 [Sep-21-2011] | |||||||
| Q28FH2 | 827 | N-terminal kinase-like pr | yes | N/A | 0.913 | 0.940 | 0.414 | 1e-167 | |
| Q561M0 | 827 | N-terminal kinase-like pr | N/A | N/A | 0.901 | 0.928 | 0.402 | 1e-165 | |
| Q96KG9 | 808 | N-terminal kinase-like pr | yes | N/A | 0.903 | 0.952 | 0.411 | 1e-154 | |
| Q5M9F8 | 807 | N-terminal kinase-like pr | yes | N/A | 0.902 | 0.952 | 0.411 | 1e-153 | |
| Q9EQC5 | 806 | N-terminal kinase-like pr | yes | N/A | 0.903 | 0.955 | 0.401 | 1e-151 | |
| A6QLH6 | 807 | N-terminal kinase-like pr | yes | N/A | 0.801 | 0.846 | 0.436 | 1e-150 | |
| Q55GS2 | 813 | Probable inactive serine/ | yes | N/A | 0.596 | 0.624 | 0.368 | 8e-95 | |
| O13733 | 637 | Protein kinase domain-con | yes | N/A | 0.607 | 0.813 | 0.266 | 1e-46 | |
| Q6P3W7 | 929 | SCY1-like protein 2 OS=Ho | no | N/A | 0.583 | 0.534 | 0.228 | 7e-27 | |
| Q8CFE4 | 930 | SCY1-like protein 2 OS=Mu | no | N/A | 0.583 | 0.534 | 0.228 | 4e-26 |
| >sp|Q28FH2|NTKL_XENTR N-terminal kinase-like protein OS=Xenopus tropicalis GN=scyl1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 589 bits (1518), Expect = e-167, Method: Compositional matrix adjust.
Identities = 356/859 (41%), Positives = 497/859 (57%), Gaps = 81/859 (9%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND----S 97
MW F+ RD ++DF Y+V +G + W GKKK + V++F + +
Sbjct: 1 MW-FWSRDPARDFPYDV-------TGEREELPAGWGVQKGKKKTGGDAVSVFTYEIRPGA 52
Query: 98 ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
+ + A + +K++KTL+HP+IL+++D +E+ +Y+ E V P+ ++ ++
Sbjct: 53 EEQTQAAKTALKRIKTLKHPNILSYVDGLET--DKCLYIVTEPVTPLGTYV-KLRTDSGG 109
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASC 217
++ ISWG+ QI +ALSFL+ND +L HN+V +++F++ GEWKLGGL+YM
Sbjct: 110 VSELEISWGLHQIVKALSFLVNDGNLIHNNVCMSAVFVDRAGEWKLGGLDYMYTAGAEDT 169
Query: 218 IPMKRYSRYEDQSTYQIPENSLSHVT---KCSTDMYGLGILIWEVFNGPLQSTNRKSLSN 274
P+K + Y PE + T K S DM+ LG LIWEVFNGPL +L +
Sbjct: 170 APLKGI----EMEKYNPPEKTDRSKTSKEKWSADMWCLGCLIWEVFNGPLPRPT--ALRS 223
Query: 275 IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKI 334
+ IP++L Y EL+ P RPNPA F+ R PGG+F N ++ LFLEEIQ+KD
Sbjct: 224 LGKIPKSLVPHYCELVGANPKVRPNPARFLQNCRSPGGFFCNSFVETNLFLEEIQIKDPA 283
Query: 335 DKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQA 394
+K FF L+ +D FP+ HK+LPQL+ AFE+G AGA VL PLFKIG+ L ++YQ
Sbjct: 284 EKQTFFEQLSENLDSFPEDFCRHKILPQLLTAFEFGSAGAVVLPPLFKIGKFLNADEYQQ 343
Query: 395 KIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQT 454
KI+P VVK+F S DRA R RLL Q+E+FI ++ + VN QIF V GF+DTNP IREQT
Sbjct: 344 KIIPVVVKMFSSTDRAMRIRLLQQMENFIQYLNEPTVNAQIFPHVVHGFMDTNPAIREQT 403
Query: 455 VKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVL 514
VKS++ LAPKLN NNLN+E ++HFARLQA+DDQG IR NTTVC+GKIA +L+P RQ+VL
Sbjct: 404 VKSMLLLAPKLNENNLNMELMKHFARLQARDDQGPIRCNTTVCLGKIAPYLNPATRQRVL 463
Query: 515 ISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFK 574
ISAFSRA +DPF P+R AGVL AAT ++ L++ A ++LP LC ++ DPEK+VR+ AFK
Sbjct: 464 ISAFSRATKDPFSPSRAAGVLGFAATHNFYSLTDCAGKVLPVLCGVTVDPEKNVREQAFK 523
Query: 575 TIKGFLGKLEQVSENPSLRESMEADVHTATPSLSNAAATWADWAVTAV---TSKFYRS-- 629
I+ FL KLE VSE+PS +E DVHTA+ S S WA WAVT V TSKF R+
Sbjct: 524 AIRSFLDKLETVSEDPSQLAELEKDVHTASVSPS-VVGGWAGWAVTGVSSLTSKFIRTGG 582
Query: 630 QSETLKTSRGPTRPSGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSASK 689
++ S G S P++ +S + +++A A+ + +E E +
Sbjct: 583 GAQDAAASEG--------ASAPSTASEASKPDTAPSSSAPPAAASTAPTSYEPEEEKGAP 634
Query: 690 GESMSDYDETPWES-----ETWGDMESSSNDT------TKVGVLDPTSSQTTERQGG--- 735
S+ +D+ W S + G E+ DT T+ +D +SS++ +Q
Sbjct: 635 DNSLDRWDDEDWGSLEDAEQNRGQTENDDWDTDWGHGKTQEKTVDFSSSRSKTKQVSPPP 694
Query: 736 ---SDGGDGWDLDDWRSLEDTPSPSMPPPLQPSQ-----------SWAMSNSLSAMSLQE 781
S DGW DD + + P PS SQ +W S S
Sbjct: 695 NRTSALDDGWGWDD--AFQTVP-PSKEHTASKSQQLEGTRPASDYNWDTSGSSGRQGDFF 751
Query: 782 NGLTSPSSDVN------STGGW-EDTEWSPIEETEPSIKMEESRKRREEKKMARQKELEA 834
L+ PSS N S G W D W +E + K E +RK+REE RQKE+EA
Sbjct: 752 ASLSEPSSQKNDNRNSDSAGDWGGDDNWESVEADQGLSKAEMARKKREE----RQKEIEA 807
Query: 835 KRAAKQSG-GPLKLGAKKL 852
KRA +++ GPLKLG +KL
Sbjct: 808 KRAERRAAKGPLKLGVRKL 826
|
Xenopus tropicalis (taxid: 8364) |
| >sp|Q561M0|NTKL_XENLA N-terminal kinase-like protein OS=Xenopus laevis GN=scyl1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 582 bits (1500), Expect = e-165, Method: Compositional matrix adjust.
Identities = 350/869 (40%), Positives = 491/869 (56%), Gaps = 101/869 (11%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND----S 97
MW F+ RD ++DF Y+V G W GKKK + V++F + +
Sbjct: 1 MW-FWSRDPARDFPYDVTGEREELPGG-------WGIQKGKKKTGGDPVSVFTYEIRPGA 52
Query: 98 ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
+ + A + K++KTL+HP+IL+++D +E+ +Y+ E V P+ ++ ++
Sbjct: 53 EEQTQAAKTASKRIKTLKHPNILSYVDGLET--DKCLYIVTEPVTPLETYV-KLRTDSGG 109
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASC 217
++ ISWG+ QI +ALSFL+ND +L HN+V +++F++ GEWKLGGL+YM +
Sbjct: 110 VSELEISWGLHQIVKALSFLVNDGNLIHNNVCMSAVFVDRAGEWKLGGLDYMYTAGAENT 169
Query: 218 IPMKRYSRYEDQSTYQIPENSLSHVT---KCSTDMYGLGILIWEVFNGPLQSTNRKSLSN 274
P K + Y PE + T K S DM+ LG LIWEVFNGPL +L +
Sbjct: 170 APRKGV----EMEKYNPPEKTDRSKTSKEKWSADMWCLGCLIWEVFNGPLPRPT--ALRS 223
Query: 275 IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKI 334
+ I ++L Y EL+ P RPNP+ F+ R PGG+F N ++ LFLEEIQ+KD
Sbjct: 224 LGKIAKSLVPHYCELVGANPKIRPNPSRFLQNCRSPGGFFCNSFVETNLFLEEIQIKDPA 283
Query: 335 DKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQA 394
+K FF L+ +D FP+ HK+LPQL+ AFE+G AGA VL PLFKIG+ L ++YQ
Sbjct: 284 EKQTFFEQLSENLDSFPEDFCRHKILPQLLTAFEFGSAGAVVLPPLFKIGKFLNADEYQQ 343
Query: 395 KIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQT 454
KI+P VVK+F S DRA R RLL Q+E+FI ++ + VN QIF V GF+DTNP IREQT
Sbjct: 344 KIIPVVVKMFSSTDRAMRIRLLQQMENFIQYLNEPTVNAQIFPHVVHGFMDTNPAIREQT 403
Query: 455 VKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVL 514
VKS++ LAPKLN NNLN++ ++HFARLQA+DDQG IR NTTVC+GKIA +L+P RQ+VL
Sbjct: 404 VKSMLLLAPKLNENNLNMDLMKHFARLQARDDQGPIRCNTTVCLGKIAPYLNPATRQRVL 463
Query: 515 ISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFK 574
ISAFSRA +DPF P+R AGVL AAT ++ +++ A ++LP LC ++ DPEK+VR+ AFK
Sbjct: 464 ISAFSRATKDPFAPSRAAGVLGFAATHNFYSMADCAGKVLPVLCGVTLDPEKNVREQAFK 523
Query: 575 TIKGFLGKLEQVSENPSLRESMEADVHTATPSLSNAAATWADWAVTAV---TSKFYRSQS 631
TI+ FL KLE VS +PS +E DVHTA+ S S WA WAVT V TSKF R+
Sbjct: 524 TIRSFLDKLETVSGDPSQLAELEKDVHTASASPS-VVGGWAGWAVTGVSSLTSKFIRTGG 582
Query: 632 ETLKTSRGPTRPSGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSASKGE 691
S PS + PA++EAS ++ + + + ++ SS E E E G++ +
Sbjct: 583 GAQDAS-----PSEGAPAPPATIEASKPDTVPSPSAPPAASTTPSSYEPEEEKGASDSLD 637
Query: 692 SMSDYDETPWESETWGDMESSSNDTTKVGVLD--------PTSSQTTERQGGSDGG---- 739
W+ E WG +E + + D T +T S G
Sbjct: 638 R--------WDDEDWGSLEDTDQSKGQTVNDDWDTDWGQSKTQQKTVHSSSSSSKGEQVL 689
Query: 740 ----------DGWDLDDWRSLEDTPSPSMPPPLQPSQS----------------W----- 768
DGW DD P++PP +P+ S W
Sbjct: 690 HPPNKTSALDDGWGWDD-------AFPTVPPAKKPTASKSQQPEEGTRPASDYNWESPGT 742
Query: 769 --AMSNSLSAMSLQENGLTSPSSDVNSTGGW--EDTEWSPIEETEPSIKMEESRKRREEK 824
+ + +S + T S + +S G W ED W +E + K E +RK+REE
Sbjct: 743 AGQQGDFFTTLSEHSSQKTDDSRNSDSPGDWGGEDN-WESVEADQGLSKAEIARKKREE- 800
Query: 825 KMARQKELEAKRAAKQSG-GPLKLGAKKL 852
RQKE+EAKRA +++ GPLKLG +KL
Sbjct: 801 ---RQKEIEAKRAERRAAKGPLKLGVRKL 826
|
Xenopus laevis (taxid: 8355) |
| >sp|Q96KG9|NTKL_HUMAN N-terminal kinase-like protein OS=Homo sapiens GN=SCYL1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 547 bits (1410), Expect = e-154, Method: Compositional matrix adjust.
Identities = 349/848 (41%), Positives = 468/848 (55%), Gaps = 78/848 (9%)
Query: 42 MWAFFGRDASKDFAYEV--GEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND--- 96
MW FF RD +DF +E+ P G W H G+KK + V+IF+ D
Sbjct: 1 MW-FFARDPVRDFPFELIPEPPEGGLPGP-------WALHRGRKKATGSPVSIFVYDVKP 52
Query: 97 -SADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKEN 155
+ + + A + K+ KTLRHP+IL ++D +E+ + +++ E V P+ +L + E
Sbjct: 53 GAEEQTQVAKAAFKRFKTLRHPNILAYIDGLET--EKCLHVVTEAVTPLGIYLKARV-EA 109
Query: 156 NEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKI-SE 214
K++ ISWG+ QI +ALSFL+ND L HN+V ++F++ GEWKLGGL+YM
Sbjct: 110 GGLKELEISWGLHQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGN 169
Query: 215 ASCIPMKRYSRYEDQSTYQIPENSLSHV-TKCSTDMYGLGILIWEVFNGPLQSTNRKSLS 273
P K E ++ ++S V K S DM+ LG LIWEVFNGPL +L
Sbjct: 170 GGGPPRKGIPELEQYDPPELADSSGRVVREKWSADMWRLGCLIWEVFNGPLPRA--AALR 227
Query: 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDK 333
N IP+ L Y EL+ P RPNPA F+ R PGG+ N ++ LFLEEIQ+K+
Sbjct: 228 NPGKIPKTLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMSNRFVETNLFLEEIQIKEP 287
Query: 334 IDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQ 393
+K KFF L+ ++D FP+ HKVLPQL+ AFE+G AGA VL+PLFK+G+ L E+YQ
Sbjct: 288 AEKQKFFQELSKSLDAFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQ 347
Query: 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQ 453
KI+P VVK+F S DRA R RLL Q+E FI ++ + VN QIF V GFLDTNP IREQ
Sbjct: 348 QKIIPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQ 407
Query: 454 TVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV 513
TVKS++ LAPKLN NLNVE ++HFARLQAKD+QG IR NTTVC+GKI +L R +V
Sbjct: 408 TVKSMLLLAPKLNEANLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRV 467
Query: 514 LISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAF 573
L SAFSRA RDPF P+R AGVL AAT + +++ AQ+ILP LC L+ DPEKSVRD AF
Sbjct: 468 LTSAFSRATRDPFAPSRVAGVLGFAATHNLYSMNDCAQKILPVLCGLTVDPEKSVRDQAF 527
Query: 574 KTIKGFLGKLEQVSENPSLRESMEADVHTA-TPSLSNAAATWADWAVTAV---TSKFYRS 629
K I+ FL KLE VSE+P+ E +E DVH A +P + AAA+WA WAVT V TSK RS
Sbjct: 528 KAIRSFLSKLESVSEDPTQLEEVEKDVHAASSPGMGGAAASWAGWAVTGVSSLTSKLIRS 587
Query: 630 QSETLKTSRG-PTRPSGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSAS 688
T T P RP+ T + + + E + E +
Sbjct: 588 HPTTAPTETNIPQRPT------------PEGVPAPAPTPVPATPTTSGHWETQEEDKDTA 635
Query: 689 KGESMSDYDETPWESETWGDMESSSNDT----------------TKVGVLDPTSSQTTER 732
+ S +D W+ E WG +E + ++V D SS++ E
Sbjct: 636 EDSSTADR----WDDEDWGSLEQEAESVLAQQDDWSTGGQVSRASQVSNSDHKSSKSPES 691
Query: 733 QGGSDGGDGWDLDDWRSLEDTPSPSMPPP----LQPSQSWAMSNSLSA----MSLQENGL 784
S +G W PS PPP L +W S +L
Sbjct: 692 DWSSWEAEG----SWEQGWQEPSSQEPPPDGTRLASEYNWGGPESSDKGDPFATLSARPS 747
Query: 785 TSPSSDVNSTGGWEDTEWSPIEETEPSIKMEESRKRREEKKMARQKELEAKRAAKQSGGP 844
T P D W + W +E +K E +RK+REE++ + + ++ AK GP
Sbjct: 748 TQPRPD-----SWGEDNWEGLETDSRQVKAELARKKREERRREMEAKRAERKVAK---GP 799
Query: 845 LKLGAKKL 852
+KLGA+KL
Sbjct: 800 MKLGARKL 807
|
Isoform 6 acts as transcriptional activator. It binds to three different types of GC-rich DNA binding sites (box-A, -B and -C) in the beta-polymerase promoter region. It also binds to the TERT promoter region. Homo sapiens (taxid: 9606) |
| >sp|Q5M9F8|NTKL_RAT N-terminal kinase-like protein OS=Rattus norvegicus GN=Scyl1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 544 bits (1401), Expect = e-153, Method: Compositional matrix adjust.
Identities = 349/848 (41%), Positives = 473/848 (55%), Gaps = 79/848 (9%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND----S 97
MW FF RD +DF +E+ W H G+KK + V+IF+ D +
Sbjct: 1 MW-FFARDPVRDFPFELNPEPPE-----GGPPGPWVLHRGRKKATGSAVSIFVYDVKPGA 54
Query: 98 ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
+ + A + K+LKTLRHP+IL ++D +E+ + +++ E V P+ +L +
Sbjct: 55 EEQTQVAKAAFKRLKTLRHPNILAYIDGLET--EKCLHIVTEAVTPLGTYLKARAEAGGL 112
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASC 217
K+Q +SWG+ QI +ALSFL+ND +L HN+V ++F++ GEWKLGGL+YM S
Sbjct: 113 KEQ-ELSWGLHQIVKALSFLVNDCNLIHNNVCMAAVFVDKAGEWKLGGLDYM--YSAQGN 169
Query: 218 IPMKRYSRYEDQSTYQIPE----NSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS 273
+ Y PE +S + K S DM+ LG LIWEVFNG L +L
Sbjct: 170 GGGPPNKGIPELEQYDPPELADSSSRAVKEKWSADMWRLGCLIWEVFNGSLPRAT--ALR 227
Query: 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDK 333
N IP++L Y EL+ P RPNPA F+ R PGG+ N ++ LFLEEIQ+K+
Sbjct: 228 NPGKIPKSLVTHYCELVGANPKVRPNPARFLQNCRAPGGFMSNRFVETNLFLEEIQIKEP 287
Query: 334 IDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQ 393
+K KFF L+ ++D FP+ HKVLPQL+ AFE+G AGA VL+PLFK+G+ L E+YQ
Sbjct: 288 AEKQKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQ 347
Query: 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQ 453
KI+P VVK+F S DRA R RLL Q+E FI ++ + VN QIF V GFLDTNP IREQ
Sbjct: 348 QKIIPVVVKMFSSTDRAMRVRLLQQMEQFIQYLDEPTVNTQIFPHVTHGFLDTNPAIREQ 407
Query: 454 TVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV 513
TVKS++ LAPKL+ NLNVE L+HFARLQAKDDQG IR NTTVC+GKI +L R +V
Sbjct: 408 TVKSMLLLAPKLSETNLNVELLKHFARLQAKDDQGPIRCNTTVCLGKIGSYLSASTRHRV 467
Query: 514 LISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAF 573
L SAFSRA +DPF P+R AGVL AAT + + + A +ILP LC L+ DPEKSVRD AF
Sbjct: 468 LTSAFSRATKDPFAPSRVAGVLGFAATHNLYSMDDCAHKILPVLCGLTVDPEKSVRDQAF 527
Query: 574 KTIKGFLGKLEQVSENPSLRESMEADVHTA-TPSLSNAAATWADWAVTAV---TSKFYRS 629
KTI+ FL KLE VSE+P+ +E DVH A +P AAA+WA WAVT V TSK R+
Sbjct: 528 KTIRSFLSKLESVSEDPTQLAEIEKDVHAASSPGTGGAAASWAGWAVTGVSSLTSKLIRT 587
Query: 630 QSETLKTSRG-PTRPSGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSAS 688
+ + P RP AS+ + + E + E A+
Sbjct: 588 HPTPVPSEAAVPQRP------------VPEGDPAPAPAPASATPATSGHRETQEEDKDAA 635
Query: 689 KGESMSDYDETPWESETWGDMESSSNDTTKVGVLDPTSSQTTERQGGSDG----GDGWDL 744
+ + +D W+ E WG +E + VL +T+ QG G D L
Sbjct: 636 EDSATADR----WDDEDWGSLEQEAE-----SVLAQQDDWSTKGQGNRAGQVSHSDHKSL 686
Query: 745 DD-WRSLE---------DTPSPSMPPP----LQPSQSWAMS------NSLSAMSLQENGL 784
D W S E PS PPP L +W + + +A+S++ +
Sbjct: 687 DSHWSSWEVEGSWDQGWQEPSSVEPPPEGTRLASEYNWGGAEPSDKGDPFAALSVRPS-- 744
Query: 785 TSPSSDVNSTGGWEDTEWSPIEETEPSIKMEESRKRREEKKMARQKELEAKRAAKQSGGP 844
T P D +S W + W +E +K E +RK+REE++ + + K+A K GP
Sbjct: 745 TQPRPDPDS---WGEDNWEGLEAESRQVKAELARKKREERRREMEAKRAEKKATK---GP 798
Query: 845 LKLGAKKL 852
+KLGA+KL
Sbjct: 799 MKLGARKL 806
|
Regulates COPI-mediated retrograde traffic. Has no detectable kinase activity in vitro. Rattus norvegicus (taxid: 10116) |
| >sp|Q9EQC5|NTKL_MOUSE N-terminal kinase-like protein OS=Mus musculus GN=Scyl1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 537 bits (1383), Expect = e-151, Method: Compositional matrix adjust.
Identities = 340/846 (40%), Positives = 473/846 (55%), Gaps = 76/846 (8%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND----S 97
MW FF RD +DF +E+ S W H G+KK + V+IF+ D +
Sbjct: 1 MW-FFARDPVRDFPFEL-----SPEPPEGGPPGPWILHRGRKKATGSAVSIFVYDVKPGA 54
Query: 98 ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
+ + A + K+LKTLRHP+IL ++D +E+ + +++ E V P+ +L +
Sbjct: 55 EEQTQVAKAAFKRLKTLRHPNILAYIDGLET--EKCLHIVTEAVTPLGTYLKARAEAGGL 112
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKI-SEAS 216
K+Q +SWG+ QI +ALSFL+ND +L HN+V ++F++ GEWKLGGL+YM
Sbjct: 113 KEQ-ELSWGLHQIVKALSFLVNDCNLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNGG 171
Query: 217 CIPMKRYSRYEDQSTYQIPENSLSHV-TKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI 275
P K E ++ ++S V K S DM+ LG LIWEVFNG L +L N
Sbjct: 172 GPPSKGIPELEQYDPPELADSSSRAVREKWSADMWRLGCLIWEVFNGSLPRA--AALRNP 229
Query: 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKID 335
IP++L Y EL+ P RPNPA F+ R PGG+ N ++ LFLEEIQ+K+ +
Sbjct: 230 GKIPKSLVTHYCELVGANPKVRPNPARFLQNCRAPGGFMSNRFVETNLFLEEIQIKEPAE 289
Query: 336 KNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAK 395
K KFF L+ ++D FP+ HKVLPQL+ AFE+G AGA VL+PLFK+G+ L E+YQ K
Sbjct: 290 KQKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKSLRAEEYQEK 349
Query: 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTV 455
I+P VVK+F S DRA R RLL Q+E FI ++ + VN QIF V GFLDTNP IREQTV
Sbjct: 350 IIPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVTHGFLDTNPAIREQTV 409
Query: 456 KSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLI 515
KS++ LAPKLN NLNVE ++HFARLQAKDDQG IR NTTVC+GKI +L R +VL
Sbjct: 410 KSMLLLAPKLNEANLNVELMKHFARLQAKDDQGPIRCNTTVCLGKIGSYLSASTRHRVLT 469
Query: 516 SAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKT 575
SAFSRA +DPF P+R AGVL AAT + + + A +ILP LC L+ DPEKSVRD AFKT
Sbjct: 470 SAFSRATKDPFAPSRVAGVLGFAATHNLYSMDDCAHKILPVLCGLTVDPEKSVRDQAFKT 529
Query: 576 IKGFLGKLEQVSENPSLRESMEADVHTA-TPSLSNAAATWADWAVTAV---TSKFYRSQS 631
I+ FL KLE VSE+P+ +E DVH A +P AAA+WA WAVT V TSK R+
Sbjct: 530 IRSFLSKLESVSEDPTQLAEVEKDVHAASSPGTGGAAASWAGWAVTGVSSLTSKLIRAHP 589
Query: 632 ETLKT-SRGPTRPSGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSASKG 690
+ + + P RP + A ++ + + E + + +A
Sbjct: 590 TPVPSDTTVPQRP------------VPEGNPAPAPALAQAIPATSGHWETQEDKDTA--- 634
Query: 691 ESMSDYDETPWESETWGDME-------------SSSNDTTKVGVLDPTSSQTTERQGGSD 737
E + D W+ E WG +E S+ ++ G ++ ++ E S
Sbjct: 635 EDSATADR--WDDEDWGSLEQEAESVLAQQDDWSAKGQGSRAGQINHPDHKSLESHWSS- 691
Query: 738 GGDGWDLD-DWRSLEDTPSPSMPPP----LQPSQSWAMS------NSLSAMSLQENGLTS 786
W+++ W PS PPP L +W + + +A+S++ +
Sbjct: 692 ----WEVEGSWDQGWQEPSSVEPPPEGTRLASEYNWGGAEPSDKGDPFAALSVRPSAQPR 747
Query: 787 PSSDVNSTGGWEDTEWSPIEETEPSIKMEESRKRREEKKMARQKELEAKRAAKQSGGPLK 846
P D W + W +E +K E +RK+REE++ + + K+ K GP+K
Sbjct: 748 PDPD-----SWGEDNWEGLEAESRQVKAELARKKREERRREMEAKRAEKKTTK---GPMK 799
Query: 847 LGAKKL 852
LGA+KL
Sbjct: 800 LGARKL 805
|
Regulates COPI-mediated retrograde traffic. Has no detectable kinase activity in vitro. Mus musculus (taxid: 10090) |
| >sp|A6QLH6|NTKL_BOVIN N-terminal kinase-like protein OS=Bos taurus GN=SCYL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 533 bits (1373), Expect = e-150, Method: Compositional matrix adjust.
Identities = 315/721 (43%), Positives = 419/721 (58%), Gaps = 38/721 (5%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND----S 97
MW FF RD +DF +E+ W H G+KK + V+IF+ D +
Sbjct: 1 MW-FFARDPVRDFPFELSPEPPE-----GSPPGPWVLHRGRKKATGSPVSIFVYDVKPVA 54
Query: 98 ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
+ + A + K+LKTLRHP+IL ++D +E+ +++ E V P+ +L E
Sbjct: 55 EEQTQVAKAAFKRLKTLRHPNILAYIDGLET--DKCLHVVTEAVTPLGVYL-KARAEAGG 111
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKI-SEAS 216
K++ +SWG+ QI +ALSFL+ND L HN+V ++F++ GEWKLGGL+YM
Sbjct: 112 LKELELSWGLHQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNGG 171
Query: 217 CIPMKRYSRYEDQSTYQIPENSLSHV-TKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI 275
P K E ++ + S V K S DM+ LG LIWEVFNGPL +L N
Sbjct: 172 GPPRKGIPELEQYDPPELADGSGRAVREKWSADMWRLGCLIWEVFNGPLPRA--AALRNP 229
Query: 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKID 335
IP++L Y EL+ P RPNPA F+ R PGG+ N ++ LFLEEIQ+K+ +
Sbjct: 230 GKIPKSLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMNNRFVETNLFLEEIQIKEPAE 289
Query: 336 KNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAK 395
K KFF L+ ++D FP+ HKVLPQL+ AFE+G AGA VL+PLFK+G+ L E+YQ K
Sbjct: 290 KQKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGSAGAVVLTPLFKVGKFLNAEEYQQK 349
Query: 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTV 455
I+P VVK+F S DRA R RLL Q+E FI ++ + VN QIF V GFLDTNP IREQTV
Sbjct: 350 IIPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQTV 409
Query: 456 KSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLI 515
KS++ LAPKLN NLNVE ++HFARLQAKD+QG IR NTTVC+GKI +L R +VL
Sbjct: 410 KSMLLLAPKLNETNLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVLT 469
Query: 516 SAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKT 575
SAFSRA +DPF P+R AGVL AAT + +++ A +ILP LC L+ DPEKSVRD AFK
Sbjct: 470 SAFSRATKDPFAPSRVAGVLGFAATHNLYSMNDCAHKILPVLCGLTVDPEKSVRDQAFKA 529
Query: 576 IKGFLGKLEQVSENPSLRESMEADVHTA-TPSLSNAAATWADWAVTAV---TSKFYRSQ- 630
I+ FL KLE VSE+P+ +E DVH A +P + AAA+WA WAVT V TSK R+
Sbjct: 530 IRSFLSKLESVSEDPTQLAEVEKDVHAASSPGMGGAAASWAGWAVTGVSSLTSKLIRAHP 589
Query: 631 SETLKTSRGPTRPSGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSASKG 690
+ L + P RP+ P L A + + + T T S E + E +
Sbjct: 590 TAALAETNVPQRPA------PEGLPAPAPTPVPATPTTS------GPWETQEESKDTEED 637
Query: 691 ESMSDYDETPWESETWGDMESSSNDTTKVGVLDPTSSQTTERQGGSDGGDGWDLDDWRSL 750
S +D W+ E WG +E + T +Q + S+ G DW S
Sbjct: 638 SSAADR----WDDEDWGSLEQEAESVLAQRDDWSTGNQASRAGQASNPGHRSQESDWSSW 693
Query: 751 E 751
E
Sbjct: 694 E 694
|
Regulates COPI-mediated retrograde traffic. Has no detectable kinase activity in vitro. Bos taurus (taxid: 9913) |
| >sp|Q55GS2|SCY1_DICDI Probable inactive serine/threonine-protein kinase scy1 OS=Dictyostelium discoideum GN=scy1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 348 bits (894), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 202/548 (36%), Positives = 311/548 (56%), Gaps = 40/548 (7%)
Query: 50 ASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIF---LNDSADTYEPALS 106
AS+ F Y +G + G + W H G KK V+IF + + E A +
Sbjct: 13 ASQSFPYNIGPIVTGYVG-----KSIWTLHSGTKKEDGSAVSIFSFDIKKNPSKLEVAKN 67
Query: 107 YVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYISWG 166
K+ KT RHP++L +LD +E+ + +Y+ E PI L + L E+ + ISWG
Sbjct: 68 GFKRAKTTRHPNVLKYLDGLETETN--IYIVTE---PI--QLLDELLEDIRNFENAISWG 120
Query: 167 IFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEAS---------C 217
++Q LSFL N +L H ++ +SIF+N G+W++GGL+++ + + +
Sbjct: 121 LYQ--EGLSFLNNKCNLTHGNIQSSSIFVNKGGDWQIGGLDFVSDVKDINNSILRNHNDL 178
Query: 218 IPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNIDN 277
IP K S +S +Q + S S+ S D + LG L++E +NG + T + + N+D
Sbjct: 179 IPNKYKSPEIMKSQWQQIQQSPSY----SIDSWMLGCLMYECYNGTM--TKAEDIKNLDQ 232
Query: 278 IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKIDKN 337
IP+ L + Y + + + R NP F+ YF+N ++ L+FLE I +KD +K
Sbjct: 233 IPKQLHQAYQKSFAVKTESRLNPQKFL-----ESPYFQNVFVETLVFLENITLKDTFEKE 287
Query: 338 KFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAKIV 397
+FF L I+K P I K+LP L+ AF+ G +LS L KIG L E+Y ++IV
Sbjct: 288 QFFKKLDQHIEKIPINICKFKILPHLVTAFDLGPVNPRLLSTLLKIGSNLSTEEYNSRIV 347
Query: 398 PCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKS 457
P VVK F +DRA R LL LEH+I H+ +A +N+QIF V GF D NPT++E T+KS
Sbjct: 348 PSVVKWFACDDRALRINLLENLEHYIQHLNEATINDQIFPHVVNGFND-NPTLKELTIKS 406
Query: 458 IIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISA 517
++ APKL + + L++FA LQ KD Q G+R NTT+C+G+I +++ +++VLI A
Sbjct: 407 MLLFAPKLQEKTM-IILLKYFAALQ-KDQQAGVRCNTTICLGRITEYMNEATKKRVLIPA 464
Query: 518 FSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIK 577
FS A++DPF P++NA + A T + L E+A R++P + ++ PEKS+R SAF I
Sbjct: 465 FSTALKDPFVPSQNAAIQAFMFTISNYSLEELATRVIPEVSRMLISPEKSIRTSAFTAIN 524
Query: 578 GFLGKLEQ 585
FL K+E+
Sbjct: 525 MFLQKIEK 532
|
Dictyostelium discoideum (taxid: 44689) |
| >sp|O13733|PPK3_SCHPO Protein kinase domain-containing protein ppk3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ppk3 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 145/545 (26%), Positives = 260/545 (47%), Gaps = 27/545 (4%)
Query: 44 AFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIF---LNDSADT 100
A F A F Y++ E + S ++ W G + S + ++F L+ +
Sbjct: 8 ASFIAKAGSQFPYDLNE-KIPLSS-----NSVWTLQTGSIRESAQPCSVFSISLSTHPEW 61
Query: 101 YEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQ 160
E A + +KTLRHP I+ +L + +S + +Y+A E V P+ L NE
Sbjct: 62 AELADRACETMKTLRHPCIIKYLSTYKSSTH--LYIATETVRPVTTEL-------NELSA 112
Query: 161 IYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPM 220
++G+++++ ALSFL ND ++ H ++ +S+++NS EW +G +
Sbjct: 113 EIKTYGLWRVSAALSFL-NDKNIVHGNLQMSSVYLNSADEWIIGDFFLAGDSPQFIKDNH 171
Query: 221 KRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNIDNIPE 280
+ + ++I ++L+ + D Y LG I ++NG LS NIP
Sbjct: 172 DKILNWSRLVPFEIQSSTLNSASFIYLDSYELGKFISHLYNG-----TPGDLSQRGNIPA 226
Query: 281 NLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKIDKNKFF 340
N+ +L++ Q+ ++F+ +PGG+F+ LI L E+++ ++ D+ K
Sbjct: 227 NIFVSAKKLLNVEGKQKLLASEFLKLGERPGGFFRTHLITLYELLSEVRINEEEDRVKLK 286
Query: 341 NGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLE-HEDYQAKIVPC 399
L+S ++ PK KV+ ++ + + V+ LFK Q+++ D +
Sbjct: 287 QLLSSKLEVIPK-NYIQKVVLNILFLLLSIDTHSDVVELLFKCAQIVKGRPDIEKDFGVP 345
Query: 400 VVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSII 459
++ L R LL + + +P I + F A +PT++E +
Sbjct: 346 LLSLLKQQSVPIRGLLLSGIINNPDVLPKNIYEDTSFSVFANLVRSNSPTLKEHAIVVFS 405
Query: 460 HLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFS 519
+APKL+ LN E LR A +Q D +RTN+T+C+GKIA +L +R+ VL +A S
Sbjct: 406 IIAPKLSKKTLNNELLRSLAVVQ-NDQHPTLRTNSTICLGKIAEYLDASVRKPVLAAALS 464
Query: 520 RAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGF 579
R+++DPF PAR A + L + Q YF +VA ++ P++ L D + +R +A F
Sbjct: 465 RSLKDPFVPAREAALKVLLSVQNYFDTKDVAIKLFPSVVPLLIDENEGIRRTAEDVTDQF 524
Query: 580 LGKLE 584
L +++
Sbjct: 525 LSRIK 529
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q6P3W7|SCYL2_HUMAN SCY1-like protein 2 OS=Homo sapiens GN=SCYL2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 130/569 (22%), Positives = 238/569 (41%), Gaps = 72/569 (12%)
Query: 76 WKFHGGKKKGSNEKVTIFLNDS--ADTYEP--------ALSY-VKKLKTLRHPSILTFLD 124
WK G KK + ++V +F+ D D Y+ +L V++L LRHP +LT
Sbjct: 47 WKIFNGTKKSTKQEVAVFVFDKKLIDKYQKFEKDQIIDSLKRGVQQLTRLRHPRLLTVQH 106
Query: 125 SVESPSKSLVYLAVEYVEPIFYHLDNTLK-------------ENNEKKQIYISWGIFQIT 171
+E L + EP+F L N L ++ + + +G+ Q++
Sbjct: 107 PLEESRDCLAFCT----EPVFASLANVLGNWENLPSPISPDIKDYKLYDVETKYGLLQVS 162
Query: 172 RALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEAS----CIPMKRY---- 223
LSFL + + H ++ +I +N G WK+ G ++ + S P K +
Sbjct: 163 EGLSFLHSSVKMVHGNITPENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEWDPNL 222
Query: 224 -SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG--PLQSTNRKSL-------- 272
S Y PE LS + ++DMY LG +++ VFN P+ N++ +
Sbjct: 223 PSLCLPNPEYLAPEYILSVSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQL 282
Query: 273 --------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLF 324
S++ NIPE ++ L++ P RP+ AD + + +F + L +
Sbjct: 283 DQLSRLGSSSLTNIPEEVREHVKLLLNVTPTVRPD-ADQMTK----IPFFDDVGAVTLQY 337
Query: 325 LEEIQMKDKIDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIG 384
+ + +D + K++FF GL + K PK + ++LP L + F + VL + I
Sbjct: 338 FDTLFQRDNLQKSQFFKGLPKVLPKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIA 397
Query: 385 QMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQ-LEHFIGHVPDAIVNEQIFQQVALGF 443
+ E+Y I+P + +F + + LQ ++ + P + + V
Sbjct: 398 EECTKEEYVKLILPELGPVFKQQEPIQILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRAL 457
Query: 444 LDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAH 503
+ I+E + I A ++Y ++ + + +R N+ VC+GKI
Sbjct: 458 EAPSIQIQELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILE 517
Query: 504 HLHPQIRQKVLISAFSRAMRDPFP-PARNAGVLAL---AATQQYFLLS--EVAQRILPAL 557
+L + VL + P PA G+L + T + ++ ++A ++LP L
Sbjct: 518 YLD---KWFVLDDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHL 574
Query: 558 CQLSTDPEKSVR--DSAFKTIKGFLGKLE 584
LS + ++ +S IK L +LE
Sbjct: 575 IPLSIENNLNLNQFNSFISVIKEMLNRLE 603
|
Component of AP2-containing clathrin coated structures at the plasma membrane or of endocytic coated vesicles. According to PubMed:15809293, probable serine/threonine-protein kinase that phosphorylates, in vitro, the beta2-subunit of the plasma membrane adapter complex AP2 and other proteins in presence of poly-L-lysine. According to PubMed:16914521, has no detectable kinase activity in vitro. May regulate clathrin-dependent trafficking between the TGN and/or the endosomal system. Homo sapiens (taxid: 9606) |
| >sp|Q8CFE4|SCYL2_MOUSE SCY1-like protein 2 OS=Mus musculus GN=Scyl2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 130/569 (22%), Positives = 237/569 (41%), Gaps = 72/569 (12%)
Query: 76 WKFHGGKKKGSNEKVTIFLNDS--ADTYEP--------ALSY-VKKLKTLRHPSILTFLD 124
WK G KK + ++V +F+ D D Y+ +L V++L LRHP +LT
Sbjct: 47 WKIFNGTKKSTKQEVAVFVFDKKLIDKYQKFEKDQIIDSLKRGVQQLTRLRHPRLLTVQH 106
Query: 125 SVESPSKSLVYLAVEYVEPIFYHLDNTLK-------------ENNEKKQIYISWGIFQIT 171
+E L + EP+F L N L ++ + + +G+ Q++
Sbjct: 107 PLEESRDCLAFCT----EPVFASLANVLGNWENLPSSISPDIKDYKLYDVETKYGLLQVS 162
Query: 172 RALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEAS----CIPMKRY---- 223
LSFL + + H +V ++ +N G WK+ G ++ S S P K +
Sbjct: 163 EGLSFLHSSVKMVHGNVTPENVILNKSGAWKIMGFDFCVSSSNPSEQEPKFPCKEWDPNL 222
Query: 224 -SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG--PLQSTNRKSL-------- 272
S Y PE LS + ++DMY LG +++ VFN P+ N++ +
Sbjct: 223 PSLCLPNPEYLAPEYILSVSCETASDMYSLGAVMYAVFNQGRPIFEVNKQDIYKSFSRQL 282
Query: 273 --------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLF 324
S++ +IPE ++ L++ P RP+ AD + + +F + L +
Sbjct: 283 DQLSRLGSSSLTSIPEEVREHVKLLLNVTPTVRPD-ADQMTKIP----FFDDVGAVTLQY 337
Query: 325 LEEIQMKDKIDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIG 384
+ + +D + K++FF GL + K PK + ++LP L + F + VL + I
Sbjct: 338 FDTLFQRDNLQKSQFFKGLPKVLPKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIA 397
Query: 385 QMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQ-LEHFIGHVPDAIVNEQIFQQVALGF 443
+ E+Y I+P + +F + + LQ ++ + P + + V
Sbjct: 398 EECTKEEYIKLILPELGPVFKQQEPIQILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRAL 457
Query: 444 LDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAH 503
+ I+E + I A ++Y ++ + + +R N+ VC+GKI
Sbjct: 458 EAPSIQIQELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILE 517
Query: 504 HLHPQIRQKVLISAFSRAMRDPFP-PARNAGVLAL---AATQQYFLLS--EVAQRILPAL 557
+L + VL + P PA G+L + T + ++ ++A ++LP L
Sbjct: 518 YLD---KWFVLDDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHL 574
Query: 558 CQLSTDPEKSVRD--SAFKTIKGFLGKLE 584
LS + ++ S IK L +LE
Sbjct: 575 IPLSIENNLNLNQFSSFIAVIKEMLSRLE 603
|
Component of AP2-containing clathrin coated structures at the plasma membrane or of endocytic coated vesicles. May be a serine/threonine-protein kinase. May regulate clathrin-dependent trafficking between the TGN and/or the endosomal system. Mus musculus (taxid: 10090) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 852 | ||||||
| 91087225 | 746 | PREDICTED: similar to CG1973 CG1973-PA [ | 0.862 | 0.985 | 0.566 | 0.0 | |
| 242017255 | 815 | conserved hypothetical protein [Pediculu | 0.904 | 0.946 | 0.562 | 0.0 | |
| 157120342 | 861 | hypothetical protein AaeL_AAEL008954 [Ae | 0.809 | 0.801 | 0.588 | 0.0 | |
| 347965119 | 904 | AGAP001091-PB [Anopheles gambiae str. PE | 0.809 | 0.763 | 0.589 | 0.0 | |
| 347965121 | 889 | AGAP001091-PA [Anopheles gambiae str. PE | 0.809 | 0.776 | 0.589 | 0.0 | |
| 195143687 | 876 | GL23718 [Drosophila persimilis] gi|19845 | 0.805 | 0.783 | 0.582 | 0.0 | |
| 195394533 | 873 | GJ10638 [Drosophila virilis] gi|19414260 | 0.803 | 0.784 | 0.581 | 0.0 | |
| 195445140 | 853 | GK11922 [Drosophila willistoni] gi|19416 | 0.803 | 0.803 | 0.581 | 0.0 | |
| 195112459 | 873 | GI10423 [Drosophila mojavensis] gi|19391 | 0.803 | 0.784 | 0.584 | 0.0 | |
| 194765328 | 870 | GF23372 [Drosophila ananassae] gi|190615 | 0.794 | 0.778 | 0.583 | 0.0 |
| >gi|91087225|ref|XP_975488.1| PREDICTED: similar to CG1973 CG1973-PA [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/822 (56%), Positives = 580/822 (70%), Gaps = 87/822 (10%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND----S 97
MW+FF RD SKDF +EVGE + + W H GK+KG+NE+V++F+ D S
Sbjct: 1 MWSFFSRDPSKDFNFEVGELVKGLD-----ERSVWTLHKGKRKGTNEEVSVFVFDIKGGS 55
Query: 98 ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
E A + VK+LKTLRHPSILT+LDS ES ++YLA E+VEP+ HL+ E
Sbjct: 56 ETQLEIAKAAVKRLKTLRHPSILTYLDSYES--DKVLYLATEHVEPLASHLEKLTIEG-A 112
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASC 217
+K +YI+WG+FQITRALSFL ND +LRHN+VN S+F+NS GEWKLGG+EY+ + S
Sbjct: 113 QKDLYIAWGLFQITRALSFLNNDGNLRHNNVNIWSVFVNSSGEWKLGGVEYVSSAQDNSN 172
Query: 218 IPMKRYSRYEDQSTYQIPENS----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS 273
+ +K E Y PE + +TKCS DM+GLG LIWEVFNGPL + SL
Sbjct: 173 VTIKIIPSLE---MYDPPEKNDPTKQRSITKCSADMWGLGCLIWEVFNGPLY--QQSSLK 227
Query: 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDK 333
+D IP+ L +Y EL+ P+ RPNPAD I R RK GGYFKNDL+D LLFLEEIQ+KDK
Sbjct: 228 LLDKIPKQLGPLYCELVGANPSSRPNPADIITRCRKLGGYFKNDLVDTLLFLEEIQIKDK 287
Query: 334 IDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQ 393
+KN+FF+ L +D FP+ + HK+LPQLI AF+YG+AG++VL+P+FK+GQ+L+ +YQ
Sbjct: 288 NEKNRFFSNLTPHLDNFPESVCKHKILPQLITAFDYGDAGSAVLAPMFKLGQLLDEAEYQ 347
Query: 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQ 453
KIVPCVVKLF SNDRATRSRLL QLEHFIGH+ A VNEQIF Q+A GF+DTNPTIREQ
Sbjct: 348 KKIVPCVVKLFVSNDRATRSRLLQQLEHFIGHLQAATVNEQIFPQIAHGFMDTNPTIREQ 407
Query: 454 TVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV 513
TVKS+IHLAPKL+YNNLNVE LRHFARLQ+KDDQGGIRTNTTVC+GKIA HLHPQIRQKV
Sbjct: 408 TVKSVIHLAPKLSYNNLNVEVLRHFARLQSKDDQGGIRTNTTVCLGKIAQHLHPQIRQKV 467
Query: 514 LISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAF 573
LISAF RAMRDPFPPARNAG+LALAATQQY+LL+EV+ RILPALCQL+ DPEKSVRDS F
Sbjct: 468 LISAFIRAMRDPFPPARNAGILALAATQQYYLLNEVSSRILPALCQLTMDPEKSVRDSVF 527
Query: 574 KTIKGFLGKLEQVSENPSLRESMEADVHTATPSLSNAAATWADWAVTAVTSKFYRSQSET 633
+TIKGFLGKLE+VSE+PSLRESMEADV+TATPSLSNAAATWA WAVTAVT+KFYRSQS+T
Sbjct: 528 RTIKGFLGKLEKVSEDPSLRESMEADVNTATPSLSNAAATWAGWAVTAVTAKFYRSQSDT 587
Query: 634 LKTSRGPTRPSGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSASKGESM 693
+K S P + + L+KPASLE S+SS+STTT++ + + S S +
Sbjct: 588 VK-SMNPM--ASKMLTKPASLEQPSSSSISTTTSSVTSMTPP----------SGSGTNKI 634
Query: 694 SDYDETPWESETWGDMESSSNDTTKVGVLDPTSSQTTERQGGSDGGDGWDLDDWRSLEDT 753
+D W++E WG +E ++ + + W
Sbjct: 635 TD----GWDNEEWGSLEEEPEVEAEL----------------TSPSEAW----------- 663
Query: 754 PSPSMPPPLQPSQSWAMSNSLSAMSLQENGLTSPSSDVNSTGGWEDTEWSPIEETEPSI- 812
SPS P+ P E+GL S+ S W D+E+ P+EE +PS
Sbjct: 664 -SPSDTTPIIPES-------------YEHGL----SNRKSANNWGDSEFEPLEE-QPSTT 704
Query: 813 --KMEESRKRREEKKMARQKELEAKRAAKQSGGPLKLGAKKL 852
K+EE++K+REE+K+ RQKELEA+RA++ +GGP+KLGAKKL
Sbjct: 705 NPKLEEAKKKREERKLMRQKELEARRASRTTGGPMKLGAKKL 746
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242017255|ref|XP_002429107.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212513971|gb|EEB16369.1| conserved hypothetical protein [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/823 (56%), Positives = 594/823 (72%), Gaps = 52/823 (6%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTY 101
MW+FF RD SKDFA+E+GEP + W H KKKGS+E+V++F+ D
Sbjct: 20 MWSFFSRDPSKDFAFEIGEPVEGL-----EDKCLWTLHKAKKKGSDEEVSVFVYDVKQGN 74
Query: 102 EPAL----SYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
E L S VK+LKTLRHPSILT+++S+E+ +YLA EYVEP+ H+ + +E ++
Sbjct: 75 EKQLELCKSAVKRLKTLRHPSILTYIESLET--DRALYLATEYVEPLGNHIKSFSQEGHQ 132
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASC 217
K Y+SWGIFQITRALSFLIND +L HN+V TS+F+N GEWKLGG+EY+ I+E S
Sbjct: 133 KDH-YLSWGIFQITRALSFLINDGNLCHNNVCLTSVFVNEAGEWKLGGVEYVAGINENST 191
Query: 218 IPMKRYSRYEDQSTYQIPE----NSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS 273
+P+K + Y PE + SH+TKCS+DM+GLG LIWEVFNG L + SL
Sbjct: 192 LPIKLLPALDK---YDPPEKLDSSKQSHITKCSSDMWGLGCLIWEVFNGHL--PKQMSLK 246
Query: 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDK 333
N++NIP++L VY EL+S P+ RPNPAD I R RK GGYFKN+L+DALLFLEEIQ+K+K
Sbjct: 247 NLENIPKSLTAVYCELVSANPSSRPNPADVITRCRKNGGYFKNELVDALLFLEEIQIKEK 306
Query: 334 IDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQ 393
+KNKFF L +++D FP+ + HK+LPQLI AFEYGEAG++VL+P+FK+G++L E+YQ
Sbjct: 307 GEKNKFFISLVNSLDNFPEHVCKHKILPQLITAFEYGEAGSAVLAPMFKLGRLLNQEEYQ 366
Query: 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQ 453
KIVPCVVKLF NDRATR RLL QLEHFI H+ VN+QIF QVA GF+DTN TIREQ
Sbjct: 367 KKIVPCVVKLFAFNDRATRIRLLQQLEHFISHLHSNTVNDQIFPQVAHGFIDTNSTIREQ 426
Query: 454 TVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV 513
TVKSIIHLAPKLNYNNLNVE LRHFARLQ+K D+G IRTNTTVC+GKIA HLHPQIRQKV
Sbjct: 427 TVKSIIHLAPKLNYNNLNVEVLRHFARLQSK-DEGSIRTNTTVCLGKIAQHLHPQIRQKV 485
Query: 514 LISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAF 573
LISA RA+RDPFPPAR+AG++A+A+ QQYFLLSEVA RILPALCQL+TDPEK+VRDS F
Sbjct: 486 LISACIRAIRDPFPPARSAGIVAMASNQQYFLLSEVAARILPALCQLTTDPEKNVRDSVF 545
Query: 574 KTIKGFLGKLEQVSENPSLRESMEADVHTATPSLSNAAATWADWAVTAVTSKFYRSQSET 633
+TIKGFLGKLE+VSE+PSLRES+EADVH +TPSLSNAAATWA WAVTAVT+KFYRSQS+T
Sbjct: 546 RTIKGFLGKLEKVSEDPSLRESIEADVHASTPSLSNAAATWAGWAVTAVTAKFYRSQSDT 605
Query: 634 LKTSRGPTRPSGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSASKGESM 693
+K+ + + + LSKP SLE S+SS+STTT++ + +SLE E G G+S+
Sbjct: 606 VKSH---SSLNNKTLSKPGSLEQPSSSSISTTTSSVTS---MTSLEQEESKG----GDSI 655
Query: 694 SDYDETPWESETWGDMESSSNDTTKVGVLDPTSSQTTERQGGSDGGDGWDLDDWRSLEDT 753
SDYDE W++E WGD+++ + + P +QT E+ + DGWD ++W SLED
Sbjct: 656 SDYDEN-WDNENWGDIDAQGSGFHNLESKPP--AQTKEKIESKN--DGWDNEEWGSLEDV 710
Query: 754 PSPSMPPPLQPSQSW---AMSNSLSAMSLQENGLTSPSSDVNS------TGGWEDTEWSP 804
PS+ P +++ ++ + +L+++ T+ SS ++ + G D E
Sbjct: 711 -EPSVEPSRTSNENLESTETKSTTTTTTLKDSNKTTESSVCSTRLNKFRSSGLADIEQEN 769
Query: 805 IEETEPSIKMEESRKRREEKKMARQKELEAKRAAKQSGGPLKL 847
+ + S K+E RK+REEKK+ +QKE + Q GPLKL
Sbjct: 770 L--SRGSSKIENLRKKREEKKLQKQKE---ENRLTQKEGPLKL 807
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157120342|ref|XP_001653616.1| hypothetical protein AaeL_AAEL008954 [Aedes aegypti] gi|108874997|gb|EAT39222.1| AAEL008954-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/725 (58%), Positives = 539/725 (74%), Gaps = 35/725 (4%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN-EKVTIFLNDSAD- 99
MW+FF RD++KDF YE+GEP F + W H GK+KG+N E+V++F+ D +
Sbjct: 1 MWSFFSRDSAKDFPYEIGEPVPQF-----DSRSIWSLHRGKRKGTNGEEVSVFVYDIKNG 55
Query: 100 ---TYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENN 156
E A + VK+LKTLRHPSIL FLDS+E+ ++Y+A E VEP+ H + E
Sbjct: 56 TDVKLELARAAVKRLKTLRHPSILQFLDSLET--DKVLYVATEQVEPLGTHFEKQAGEG- 112
Query: 157 EKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEAS 216
++ +Y++WGIFQITRALSFL ND +LRHN+V+ S+ +N+ GEWKLGGLEY+ ++
Sbjct: 113 PQRDLYLAWGIFQITRALSFLNNDGNLRHNNVSAWSVLVNASGEWKLGGLEYVSSTDASA 172
Query: 217 CIPMKRYSRYEDQSTYQIPE----NSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL 272
P+K E Y PE N L +TKCSTDM+GLG L+WE FNGPL+S R +L
Sbjct: 173 APPIKIPPALE---IYDPPEKNDANKLKSMTKCSTDMWGLGCLVWEAFNGPLRS--RSNL 227
Query: 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKD 332
++ +IP++L +Y EL+ P RPNPAD I + RKPGG+FKNDL+D LLFLEEIQ+KD
Sbjct: 228 KDLASIPKSLAPLYCELVGASPASRPNPADIITKCRKPGGFFKNDLVDTLLFLEEIQIKD 287
Query: 333 KIDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDY 392
K +KN+FF+ L +D FP + +K+LPQLI A+EYG+AG++VL+P+FK+G++L+ +Y
Sbjct: 288 KAEKNRFFSALTPQLDNFPDNVCKNKILPQLITAYEYGDAGSAVLAPMFKLGRLLDEAEY 347
Query: 393 QAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIRE 452
Q +IVPCVVKLF S DR TRSRLL QLE FI H+ +VN+QIF Q+A GFLDTNPTIRE
Sbjct: 348 QKRIVPCVVKLFASTDRVTRSRLLQQLELFINHLQTGVVNDQIFPQIAHGFLDTNPTIRE 407
Query: 453 QTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ--IR 510
QTVKSIIHLAPKLNYNNLNVE LRHFARLQ++DDQGGIRTNTTVC+GKIA HLHPQ +R
Sbjct: 408 QTVKSIIHLAPKLNYNNLNVEVLRHFARLQSRDDQGGIRTNTTVCLGKIAPHLHPQAIVR 467
Query: 511 QKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRD 570
Q+VL+SAF RAMRDPFPPAR AG+LALAATQQYFLL+EVA RILPALC L+ DPEK+VRD
Sbjct: 468 QRVLVSAFIRAMRDPFPPARVAGILALAATQQYFLLNEVANRILPALCPLTADPEKTVRD 527
Query: 571 SAFKTIKGFLGKLEQVSENPSLRESMEADVHTATPSLSNAAATWADWAVTAVTSKFYRSQ 630
AFKTI+GFLGKLE+VSE+PSLRESMEADVHTATPSL NAAATWA WAVTAVT+KFYRSQ
Sbjct: 528 PAFKTIRGFLGKLEKVSEDPSLRESMEADVHTATPSLGNAAATWAGWAVTAVTAKFYRSQ 587
Query: 631 SETLKTSRGPTRPSGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSASKG 690
S+T + R P +G+ LSKPASLE S+SS+STTT++ + +SLEHE SA
Sbjct: 588 SDTAR-PRPPL--TGKNLSKPASLEQPSSSSISTTTSSVTS---MTSLEHE----SADTS 637
Query: 691 ESMSDYDETPWESETWGDMESSSNDTTKV-GVLDPTSSQTTERQGGSDGGDGWDLDDWRS 749
S SDY W+ E WGDM++S + ++ + G +P ++ +D DGWD +DW S
Sbjct: 638 ASASDYGPDNWDQENWGDMDTSQDPSSPMAGTSNPLTTSLNMIGTVNDTRDGWDNEDWGS 697
Query: 750 LEDTP 754
LE+ P
Sbjct: 698 LEEVP 702
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|347965119|ref|XP_003437215.1| AGAP001091-PB [Anopheles gambiae str. PEST] gi|333469528|gb|EGK97330.1| AGAP001091-PB [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/724 (58%), Positives = 538/724 (74%), Gaps = 34/724 (4%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFL----NDS 97
MW+FF RD+SKDF YE+G+P F+ + W GK+KGSN++V++F N S
Sbjct: 1 MWSFFSRDSSKDFPYEIGDPVQQFN-----TKSIWSLFRGKRKGSNDEVSVFTYDIKNGS 55
Query: 98 ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
E A + +K+LKTLRHPSIL FLDS+ES ++Y+A E VEP+ H+ N L
Sbjct: 56 DIKLELARAALKRLKTLRHPSILQFLDSLES--DKVLYVATEPVEPLGTHIGN-LAAQGP 112
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASC 217
++ +Y++WGIFQITRALSFL ND +LRHN+V+ S+FIN+ GEWKLGGLEY +S A
Sbjct: 113 QRDLYLAWGIFQITRALSFLNNDGNLRHNNVSIWSVFINTSGEWKLGGLEY---VSSAEL 169
Query: 218 IPMKRYSRYEDQSTYQIPENS----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS 273
+ Y PE + + TKCS+DM+GLG L+WE FN PL++ R L
Sbjct: 170 PVVPPIKIPPSLEIYDPPEKNDASKIKTATKCSSDMWGLGCLVWESFNEPLKT--RGHLK 227
Query: 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDK 333
NI+ IP++L +Y EL+ P RPNPAD I + RKPGG+FKNDL+D+LLFLEEIQ+KDK
Sbjct: 228 NIERIPKSLAPLYCELVGATPANRPNPADVITKCRKPGGFFKNDLVDSLLFLEEIQIKDK 287
Query: 334 IDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQ 393
I+K +FF+ L + ID FP + +K+LPQLI A+EYG+AG++VL+P+FK+G++L+ +YQ
Sbjct: 288 IEKMRFFSSLTAQIDNFPDNVCRYKILPQLITAYEYGDAGSAVLAPMFKLGRLLDEGEYQ 347
Query: 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQ 453
+IVPCVVKLF S DR TRSRLL QL+ FI H+ +VN+QIF Q+A GFLDTNPTIREQ
Sbjct: 348 KRIVPCVVKLFASTDRVTRSRLLQQLDLFISHLQPNVVNDQIFPQIAHGFLDTNPTIREQ 407
Query: 454 TVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV 513
TVKSIIHLAPKLNYNNLNVE LRHFARLQ++DDQGGIRTNTTVC+GKIA HLHPQ+RQ+V
Sbjct: 408 TVKSIIHLAPKLNYNNLNVEVLRHFARLQSRDDQGGIRTNTTVCLGKIAPHLHPQVRQRV 467
Query: 514 LISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAF 573
L+SAF RAMRDPFPP+R AG+LALAATQQYFLL+EVA RILPALC L+TDPEKSVRD AF
Sbjct: 468 LVSAFIRAMRDPFPPSRVAGILALAATQQYFLLNEVAIRILPALCPLTTDPEKSVRDPAF 527
Query: 574 KTIKGFLGKLEQVSENPSLRESMEADVHTATPSLSNAAATWADWAVTAVTSKFYRSQSET 633
KT++GFLGKLE+VSE+PSLRESMEADVHTATPSL NAAATWA WAVTAVT+KFYRSQS+T
Sbjct: 528 KTLRGFLGKLEKVSEDPSLRESMEADVHTATPSLGNAAATWAGWAVTAVTAKFYRSQSDT 587
Query: 634 LKTSRGPTRP-SGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSASKGES 692
+ P P +G+ LSKPASLE S+SS+STTT++ + +SLEHE SA S
Sbjct: 588 AR----PKPPLTGKTLSKPASLEQPSSSSISTTTSSVTS---MTSLEHE----SADTSAS 636
Query: 693 MSDYDETPWESETWGDMESSSNDTTKV-GVLDPTSSQTTERQGGSDGGDGWDLDDWRSLE 751
+SDY W+ E WGDM++S + ++ + G + +S SD DGWD +DW SLE
Sbjct: 637 VSDYGPDNWDQENWGDMDTSQDPSSPMTGTSNQPNSNLNMIGSVSDVRDGWDNEDWGSLE 696
Query: 752 DTPS 755
+ P+
Sbjct: 697 EDPN 700
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|347965121|ref|XP_318327.5| AGAP001091-PA [Anopheles gambiae str. PEST] gi|333469527|gb|EAA13516.5| AGAP001091-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/724 (58%), Positives = 538/724 (74%), Gaps = 34/724 (4%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFL----NDS 97
MW+FF RD+SKDF YE+G+P F+ + W GK+KGSN++V++F N S
Sbjct: 1 MWSFFSRDSSKDFPYEIGDPVQQFN-----TKSIWSLFRGKRKGSNDEVSVFTYDIKNGS 55
Query: 98 ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
E A + +K+LKTLRHPSIL FLDS+ES ++Y+A E VEP+ H+ N L
Sbjct: 56 DIKLELARAALKRLKTLRHPSILQFLDSLES--DKVLYVATEPVEPLGTHIGN-LAAQGP 112
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASC 217
++ +Y++WGIFQITRALSFL ND +LRHN+V+ S+FIN+ GEWKLGGLEY +S A
Sbjct: 113 QRDLYLAWGIFQITRALSFLNNDGNLRHNNVSIWSVFINTSGEWKLGGLEY---VSSAEL 169
Query: 218 IPMKRYSRYEDQSTYQIPENS----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS 273
+ Y PE + + TKCS+DM+GLG L+WE FN PL++ R L
Sbjct: 170 PVVPPIKIPPSLEIYDPPEKNDASKIKTATKCSSDMWGLGCLVWESFNEPLKT--RGHLK 227
Query: 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDK 333
NI+ IP++L +Y EL+ P RPNPAD I + RKPGG+FKNDL+D+LLFLEEIQ+KDK
Sbjct: 228 NIERIPKSLAPLYCELVGATPANRPNPADVITKCRKPGGFFKNDLVDSLLFLEEIQIKDK 287
Query: 334 IDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQ 393
I+K +FF+ L + ID FP + +K+LPQLI A+EYG+AG++VL+P+FK+G++L+ +YQ
Sbjct: 288 IEKMRFFSSLTAQIDNFPDNVCRYKILPQLITAYEYGDAGSAVLAPMFKLGRLLDEGEYQ 347
Query: 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQ 453
+IVPCVVKLF S DR TRSRLL QL+ FI H+ +VN+QIF Q+A GFLDTNPTIREQ
Sbjct: 348 KRIVPCVVKLFASTDRVTRSRLLQQLDLFISHLQPNVVNDQIFPQIAHGFLDTNPTIREQ 407
Query: 454 TVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV 513
TVKSIIHLAPKLNYNNLNVE LRHFARLQ++DDQGGIRTNTTVC+GKIA HLHPQ+RQ+V
Sbjct: 408 TVKSIIHLAPKLNYNNLNVEVLRHFARLQSRDDQGGIRTNTTVCLGKIAPHLHPQVRQRV 467
Query: 514 LISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAF 573
L+SAF RAMRDPFPP+R AG+LALAATQQYFLL+EVA RILPALC L+TDPEKSVRD AF
Sbjct: 468 LVSAFIRAMRDPFPPSRVAGILALAATQQYFLLNEVAIRILPALCPLTTDPEKSVRDPAF 527
Query: 574 KTIKGFLGKLEQVSENPSLRESMEADVHTATPSLSNAAATWADWAVTAVTSKFYRSQSET 633
KT++GFLGKLE+VSE+PSLRESMEADVHTATPSL NAAATWA WAVTAVT+KFYRSQS+T
Sbjct: 528 KTLRGFLGKLEKVSEDPSLRESMEADVHTATPSLGNAAATWAGWAVTAVTAKFYRSQSDT 587
Query: 634 LKTSRGPTRP-SGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSASKGES 692
+ P P +G+ LSKPASLE S+SS+STTT++ + +SLEHE SA S
Sbjct: 588 AR----PKPPLTGKTLSKPASLEQPSSSSISTTTSSVTS---MTSLEHE----SADTSAS 636
Query: 693 MSDYDETPWESETWGDMESSSNDTTKV-GVLDPTSSQTTERQGGSDGGDGWDLDDWRSLE 751
+SDY W+ E WGDM++S + ++ + G + +S SD DGWD +DW SLE
Sbjct: 637 VSDYGPDNWDQENWGDMDTSQDPSSPMTGTSNQPNSNLNMIGSVSDVRDGWDNEDWGSLE 696
Query: 752 DTPS 755
+ P+
Sbjct: 697 EDPN 700
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195143687|ref|XP_002012829.1| GL23718 [Drosophila persimilis] gi|198450902|ref|XP_001358173.2| GA15165 [Drosophila pseudoobscura pseudoobscura] gi|194101772|gb|EDW23815.1| GL23718 [Drosophila persimilis] gi|198131245|gb|EAL27310.2| GA15165 [Drosophila pseudoobscura pseudoobscura] | Back alignment and taxonomy information |
|---|
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/717 (58%), Positives = 531/717 (74%), Gaps = 31/717 (4%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND---SA 98
MW+FF RD+SKDF Y++GEP F ++ W H K+KG+ E+V++F+ D +
Sbjct: 1 MWSFFSRDSSKDFPYDIGEPVSGFDN-----YSIWTLHKAKRKGTLEEVSVFVYDIRSGS 55
Query: 99 DT-YEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
DT E A + +K+LKTLRHPSIL +LDS+E+ ++Y+A E V+P+ + L +N
Sbjct: 56 DTKCELAKAALKRLKTLRHPSILQYLDSLET--DKMLYVATEAVDPLGTYF-TKLATDNV 112
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASC 217
+K +Y++WGIFQITRALSFL ND +LRHN+V+ S+F+N+ GEWKLG LEY +S A
Sbjct: 113 QKGLYLAWGIFQITRALSFLNNDGNLRHNNVSAWSVFVNASGEWKLGSLEY---VSAADG 169
Query: 218 IPMKRYSRYEDQSTYQIPENS----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS 273
PM Y PE + L TKCS DM+GLG L+WE FNG L+ R +L
Sbjct: 170 NPMPPVKIPVTLEVYDSPEKNDQSKLKAATKCSVDMWGLGCLVWEAFNGVLKQ--RSNLK 227
Query: 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDK 333
+ID+IP++L+ +Y EL+ P+ RPNPAD I R RKPGG+FKNDL+D LLFLEEIQ+KDK
Sbjct: 228 DIDHIPKSLQSLYCELVGASPSNRPNPADIITRCRKPGGFFKNDLVDTLLFLEEIQIKDK 287
Query: 334 IDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQ 393
+KN+FF+GL + +D FP + HK+LPQLIN++EYG+AG++VL+P+FK+G++L+ +YQ
Sbjct: 288 AEKNRFFSGLTTHLDNFPDNVCKHKILPQLINSYEYGDAGSAVLAPMFKLGKLLDEVEYQ 347
Query: 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQ 453
+IVPCVVKLF S DR TRSRLL QL+ FI H+ +VN+QIF QVA GFLDTN TIREQ
Sbjct: 348 KRIVPCVVKLFASTDRVTRSRLLQQLDLFIAHLQPQVVNDQIFPQVAHGFLDTNATIREQ 407
Query: 454 TVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV 513
TVKSIIHLAPKLNYNNLNVE LRHFARLQA+DDQGGIRTNTTVC+GKIA HLHPQ+RQ+V
Sbjct: 408 TVKSIIHLAPKLNYNNLNVEVLRHFARLQARDDQGGIRTNTTVCLGKIAPHLHPQVRQRV 467
Query: 514 LISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAF 573
L+SAF RAMRDPFPPAR AGVLALAATQQYFLLSEVA R+LP+LC L+ DPEK+VRD AF
Sbjct: 468 LVSAFIRAMRDPFPPARVAGVLALAATQQYFLLSEVANRVLPSLCSLTVDPEKTVRDPAF 527
Query: 574 KTIKGFLGKLEQVSENPSLRESMEADVHTATPSLSNAAATWADWAVTAVTSKFYRSQSET 633
KTI+GFLGKLE+VSE+PSLRE+MEADVHTATPS+ NAAATWA WAVTAVT+KFYRSQS+
Sbjct: 528 KTIRGFLGKLEKVSEDPSLRETMEADVHTATPSIGNAAATWAGWAVTAVTAKFYRSQSD- 586
Query: 634 LKTSRGPTRPSGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSASKGESM 693
+SR +GR LSKPASLE S+SS+STTT++ + +SLEHE SA S
Sbjct: 587 --SSRPRPPLTGRNLSKPASLEQPSSSSLSTTTSSVTS---MTSLEHESNETSA----SA 637
Query: 694 SDYDETPWESETWGDMESSSNDTTKVGVLDPTSSQTTERQGGSDGGDGWDLDDWRSL 750
SDY W++E WG+M++S + ++ + + DGWD ++W SL
Sbjct: 638 SDYGNNDWDNENWGEMDTSQDPSSPLAASSNNGGALVATNALIEVRDGWDNEEWGSL 694
|
Source: Drosophila persimilis Species: Drosophila persimilis Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195394533|ref|XP_002055897.1| GJ10638 [Drosophila virilis] gi|194142606|gb|EDW59009.1| GJ10638 [Drosophila virilis] | Back alignment and taxonomy information |
|---|
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/717 (58%), Positives = 534/717 (74%), Gaps = 32/717 (4%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND---SA 98
MW+FF RD+SKDF Y++GEP F ++ W H K+KG+ E+V++F+ D +
Sbjct: 1 MWSFFSRDSSKDFPYDIGEPVAGFDN-----YSIWTLHKAKRKGTLEEVSVFVYDIRSGS 55
Query: 99 DT-YEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
DT E A + +K+LKTLRHPSIL +LDS+E+ ++Y+A E V+P+ + L +N
Sbjct: 56 DTKCELAKAALKRLKTLRHPSILQYLDSLET--DKMLYVATEAVDPLGTYF-TKLATDNV 112
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASC 217
+K +Y++WGIFQITRALSFL ND +LRHN+V+ S+F+N+ GEWKLG LEY+
Sbjct: 113 QKGLYLAWGIFQITRALSFLNNDGNLRHNNVSAWSVFVNASGEWKLGSLEYVAAADGNPL 172
Query: 218 IPMKRYSRYEDQSTYQIPENS----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS 273
P+K E Y PE + L TKCS DM+GLG L+WE FNG L+ R +L
Sbjct: 173 PPVKIPVTLE---VYDAPEKNDQSKLKAATKCSVDMWGLGCLVWEAFNGVLKQ--RSNLK 227
Query: 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDK 333
+I++IP++L+ +Y EL+ P+ RPNPAD I R RKPGG+FKNDL+D LLFLEEIQ+KDK
Sbjct: 228 DIEHIPKSLQSLYCELVGASPSNRPNPADIITRCRKPGGFFKNDLVDTLLFLEEIQIKDK 287
Query: 334 IDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQ 393
+KN+FF+GL + ++ FP + HK+LPQLI A+EYG+AG++VL+P+FK+G++L+ ++YQ
Sbjct: 288 AEKNRFFSGLTTHLENFPDNVCKHKILPQLITAYEYGDAGSAVLAPMFKLGKLLDEQEYQ 347
Query: 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQ 453
+IVPCVVKLF S DR TRSRLL QL+ FI H+ +VN+QIF QVA GFLDTN TIREQ
Sbjct: 348 KRIVPCVVKLFASTDRVTRSRLLQQLDLFIAHLQPPVVNDQIFPQVAHGFLDTNATIREQ 407
Query: 454 TVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV 513
TVKSIIHLAPKLNYNNLNVE LRHFARLQA+DDQGGIRTNTTVC+GKIA HLHPQ+RQ+V
Sbjct: 408 TVKSIIHLAPKLNYNNLNVEVLRHFARLQARDDQGGIRTNTTVCLGKIAPHLHPQVRQRV 467
Query: 514 LISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAF 573
L+SAF RAMRDPFPPAR AGVLALAATQQYFLLSEVA R+LP+LC L+ DPEK+VRD AF
Sbjct: 468 LVSAFIRAMRDPFPPARVAGVLALAATQQYFLLSEVANRVLPSLCSLTVDPEKTVRDPAF 527
Query: 574 KTIKGFLGKLEQVSENPSLRESMEADVHTATPSLSNAAATWADWAVTAVTSKFYRSQSET 633
KTI+GFLGKLE+VSE+PSLRE+MEADVHTATPS+ NAAATWA WAVTAVT+KFYRSQS+
Sbjct: 528 KTIRGFLGKLEKVSEDPSLRETMEADVHTATPSIGNAAATWAGWAVTAVTAKFYRSQSD- 586
Query: 634 LKTSRGPTRPSGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSASKGESM 693
+SR +GR LSKPASLE S+SS+STTT++ + +SLEHE SA S
Sbjct: 587 --SSRPRPPLTGRNLSKPASLEQPSSSSLSTTTSSVTS---MTSLEHESNDTSA----SA 637
Query: 694 SDYDETPWESETWGDMESSSNDTTKVGVLDPTSSQTTERQGGSDGGDGWDLDDWRSL 750
SDY W++E WG+M++S + ++ + + Q S+ DGWD ++W SL
Sbjct: 638 SDYGNNDWDNENWGEMDTSQDPSSPLAA-SSNNGQIVAANALSEVRDGWDNEEWGSL 693
|
Source: Drosophila virilis Species: Drosophila virilis Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195445140|ref|XP_002070191.1| GK11922 [Drosophila willistoni] gi|194166276|gb|EDW81177.1| GK11922 [Drosophila willistoni] | Back alignment and taxonomy information |
|---|
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/717 (58%), Positives = 535/717 (74%), Gaps = 32/717 (4%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND---SA 98
MW+FF RD+SKDF YE+GEP F ++ W+ H K+KG+ E+V++F+ D +
Sbjct: 1 MWSFFSRDSSKDFPYEIGEPVAGFDN-----YSIWQLHKAKRKGTLEEVSVFVYDIRSGS 55
Query: 99 DT-YEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
DT E A + +K+LKTLRHPSIL +LDS+E+ ++Y+A E V+P+ + L ++
Sbjct: 56 DTKCELAKASLKRLKTLRHPSILQYLDSLET--DKMLYVATEAVDPLGTYF-TKLATDSV 112
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASC 217
+K +Y++WGIFQITRALSFL ND +LRHN+V+ S+F+N+ GEWKLG LE+ +S A
Sbjct: 113 QKGLYLAWGIFQITRALSFLNNDGNLRHNNVSAWSVFVNASGEWKLGSLEF---VSAADG 169
Query: 218 IPMKRYSRYEDQSTYQIPENS----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS 273
PM Y PE + L TKCS DM+GLG L+WE FNG L+ R +L
Sbjct: 170 NPMPPVKIPVTLEVYDAPEKNDQSKLKAATKCSVDMWGLGCLVWEAFNGVLKQ--RSNLK 227
Query: 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDK 333
+I++IP++L+ +Y EL+ P+ RPNPAD I R RKPGG+FKNDL+D LLFLEEIQ+KDK
Sbjct: 228 DIEHIPKSLQSLYCELVGASPSNRPNPADIITRCRKPGGFFKNDLVDTLLFLEEIQIKDK 287
Query: 334 IDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQ 393
+KN+FF+GL + +D FP + HK+LPQLI A+EYG+AG++VL+P+FK+G++L+ +YQ
Sbjct: 288 AEKNRFFSGLTTHLDYFPDNVCKHKILPQLITAYEYGDAGSAVLAPMFKLGKLLDEVEYQ 347
Query: 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQ 453
+IVPCVVKLFGS DR TRSRLL QL+ FI H+ +VN+QIF QVA GFLDTN TIREQ
Sbjct: 348 KRIVPCVVKLFGSTDRVTRSRLLQQLDLFIAHLQPQVVNDQIFPQVAHGFLDTNATIREQ 407
Query: 454 TVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV 513
TVKSIIHLAPKLNYNNLNVE LRHFARLQA+DDQGGIRTNTTVC+GKIA HLHPQ+RQ+V
Sbjct: 408 TVKSIIHLAPKLNYNNLNVEVLRHFARLQARDDQGGIRTNTTVCLGKIAPHLHPQVRQRV 467
Query: 514 LISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAF 573
L+SAF RAMRDPFPPAR AGVLALAATQQYFLLSEVA R+LP+LC L+ DPEK+VRD AF
Sbjct: 468 LVSAFIRAMRDPFPPARVAGVLALAATQQYFLLSEVANRVLPSLCSLTVDPEKTVRDPAF 527
Query: 574 KTIKGFLGKLEQVSENPSLRESMEADVHTATPSLSNAAATWADWAVTAVTSKFYRSQSET 633
KT++GFLGKLE+VSE+PSLRE+MEADVHTATPS+ NAAATWA WAVTAVT+KFYRSQS+
Sbjct: 528 KTVRGFLGKLEKVSEDPSLRETMEADVHTATPSIGNAAATWAGWAVTAVTAKFYRSQSD- 586
Query: 634 LKTSRGPTRPSGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSASKGESM 693
+SR +GR LSKPASLE S+SS+STTT++ + +SLEHE SA S
Sbjct: 587 --SSRPRPPLTGRNLSKPASLEQPSSSSLSTTTSSVTS---MTSLEHESNDTSA----SA 637
Query: 694 SDYDETPWESETWGDMESSSNDTTKVGVLDPTSSQTTERQGGSDGGDGWDLDDWRSL 750
SDY W++E WG+M++S + ++ + + Q ++ DGWD ++W SL
Sbjct: 638 SDYGNNDWDNENWGEMDTSQDPSSPLAA-SSNNGQLVAANALNEVRDGWDNEEWGSL 693
|
Source: Drosophila willistoni Species: Drosophila willistoni Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195112459|ref|XP_002000790.1| GI10423 [Drosophila mojavensis] gi|193917384|gb|EDW16251.1| GI10423 [Drosophila mojavensis] | Back alignment and taxonomy information |
|---|
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/717 (58%), Positives = 531/717 (74%), Gaps = 32/717 (4%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND----S 97
MW+FF RD+SKDF Y++GEP F ++ W H K+KG+ E+V++F+ D S
Sbjct: 1 MWSFFSRDSSKDFPYDIGEPVAGFDN-----YSIWTLHKAKRKGTLEEVSVFVYDIRSGS 55
Query: 98 ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
E A + +K+LKTLRHPSIL +LDS+E+ ++Y+A E VEP+ + L ++
Sbjct: 56 ETKSELAKAALKRLKTLRHPSILQYLDSLET--DKMLYVATEAVEPLGTYF-TKLATDSV 112
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASC 217
+K +Y++WGIFQITRALSFL ND +LRHN+V+ S+F+NS GEWKLG LEY +S A
Sbjct: 113 QKGLYLAWGIFQITRALSFLNNDGNLRHNNVSAWSVFVNSSGEWKLGSLEY---VSAADG 169
Query: 218 IPMKRYSRYEDQSTYQIPENS----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS 273
PM Y PE + L TKCS DM+GLG L+WE FNG L+ R +L
Sbjct: 170 NPMPPAKIPVTLEVYDAPEKNDPTKLKAATKCSVDMWGLGCLVWEAFNGVLKQ--RSNLK 227
Query: 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDK 333
+I++IP++L+ +Y EL+ P+ RPNPAD I R RKPGG+FKNDL+D LLFLEEIQ+KDK
Sbjct: 228 DIEHIPKSLQSLYCELVGASPSNRPNPADIITRCRKPGGFFKNDLVDTLLFLEEIQIKDK 287
Query: 334 IDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQ 393
+KN+FF+GL + ++ FP + HK+LPQLI A+EYG+AG++VL+P+FK+G++L+ +YQ
Sbjct: 288 AEKNRFFSGLTTHLENFPDNVCKHKILPQLITAYEYGDAGSAVLAPMFKLGKLLDEVEYQ 347
Query: 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQ 453
+IVPCVVKLF S DR TRSRLL QL+ FI H+ +VNEQIF QVA GFLDTN TIREQ
Sbjct: 348 KRIVPCVVKLFASTDRVTRSRLLQQLDLFIAHLQPPVVNEQIFPQVAHGFLDTNATIREQ 407
Query: 454 TVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV 513
TVKSIIHLAPKLNYNNLNVE LRHFARLQA+DDQGGIRTNTTVC+GKIA HLHPQ+RQ+V
Sbjct: 408 TVKSIIHLAPKLNYNNLNVEVLRHFARLQARDDQGGIRTNTTVCLGKIAPHLHPQVRQRV 467
Query: 514 LISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAF 573
L+SAF RAMRDPFPPAR AGVLALAATQQYFLLSEVA R+LP+LC LS DPEK+VRD AF
Sbjct: 468 LVSAFIRAMRDPFPPARVAGVLALAATQQYFLLSEVANRVLPSLCSLSVDPEKTVRDPAF 527
Query: 574 KTIKGFLGKLEQVSENPSLRESMEADVHTATPSLSNAAATWADWAVTAVTSKFYRSQSET 633
KTI+GFLGKLE+VSE+PSLRE+MEADVHTATPS+ NAAATWA WAVTAVT+KFYRSQS+
Sbjct: 528 KTIRGFLGKLEKVSEDPSLRETMEADVHTATPSIGNAAATWAGWAVTAVTAKFYRSQSD- 586
Query: 634 LKTSRGPTRPSGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSASKGESM 693
+SR +GR LSKPASLE S+SS+STTT++ + +SLEHE SA S
Sbjct: 587 --SSRPRPPLTGRNLSKPASLEQPSSSSLSTTTSSVTS---MTSLEHESNDTSA----SA 637
Query: 694 SDYDETPWESETWGDMESSSNDTTKVGVLDPTSSQTTERQGGSDGGDGWDLDDWRSL 750
SDY W++E WG+M++S + ++ + + Q ++ DGWD ++W SL
Sbjct: 638 SDYGNNDWDNENWGEMDTSQDPSSPLAA-SSNNGQLITTNPLNEVRDGWDNEEWGSL 693
|
Source: Drosophila mojavensis Species: Drosophila mojavensis Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194765328|ref|XP_001964779.1| GF23372 [Drosophila ananassae] gi|190615051|gb|EDV30575.1| GF23372 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/725 (58%), Positives = 532/725 (73%), Gaps = 48/725 (6%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND---SA 98
MW+FF RD+SKDF Y++GEP F ++ W H K+K + E+V++F+ D +
Sbjct: 1 MWSFFSRDSSKDFPYDIGEPVGGFDS-----YSIWTLHKAKRKTTLEEVSVFVYDIRSGS 55
Query: 99 DT-YEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
DT E A + +K+LKTLRHPSIL +LDS+E+ ++Y+A E VEP+ + L +N
Sbjct: 56 DTKCELAKAALKRLKTLRHPSILQYLDSLET--DKMLYVATEAVEPLGSYF-TKLATDNV 112
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASC 217
+K +Y++WGIFQITRALSFL ND +LRHN+V+ S+F+N+ GEWKLG LEY +S A
Sbjct: 113 QKGLYLAWGIFQITRALSFLNNDGNLRHNNVSAWSVFVNASGEWKLGSLEY---VSAADG 169
Query: 218 IPMKRYSRYEDQSTYQIPENS----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS 273
PM Y PE + L TKCS DM+GLG L+WE FNG L+ R +L
Sbjct: 170 NPMPPAKIPVTLEVYDSPEKNDQTKLKAATKCSVDMWGLGCLVWEAFNGVLKQ--RSNLK 227
Query: 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDK 333
+I++IP++L+ +Y EL+ P+ RPNPAD I R RKPGG+FKNDL+D LLFLEEIQ+KDK
Sbjct: 228 DIEHIPKSLQSLYCELVGASPSNRPNPADIITRCRKPGGFFKNDLVDTLLFLEEIQIKDK 287
Query: 334 IDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQ 393
+KN+FF+GL + +D FP + HK+LPQLI A+EYG+AG++VL+P+FK+G++L+ +YQ
Sbjct: 288 AEKNRFFSGLTTHLDNFPDNVCKHKILPQLITAYEYGDAGSAVLAPMFKLGKLLDEVEYQ 347
Query: 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQ 453
+IVPCVVKLFGS DR TRSRLL QL+ FI H+ +VN+QIF QVA GFLDTN TIREQ
Sbjct: 348 KRIVPCVVKLFGSTDRVTRSRLLQQLDLFIAHLQPQVVNDQIFPQVAHGFLDTNATIREQ 407
Query: 454 TVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV 513
TVKSIIHLAPKLNYNNLNVE LRHFARLQA+DDQGGIRTNTTVC+GKIA HLHPQ+RQ+V
Sbjct: 408 TVKSIIHLAPKLNYNNLNVEVLRHFARLQARDDQGGIRTNTTVCLGKIAPHLHPQVRQRV 467
Query: 514 LISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAF 573
L+SAF RAMRDPFPPAR AGVLALAATQQYFLLSEVA R+LP+LC LS DPEK+VRD AF
Sbjct: 468 LVSAFIRAMRDPFPPARVAGVLALAATQQYFLLSEVANRVLPSLCSLSVDPEKTVRDPAF 527
Query: 574 KTIKGFLGKLEQVSENPSLRESMEADVHTATPSLSNAAATWADWAVTAVTSKFYRSQSET 633
KTI+GFLGKLE+VSE+PSLRE+MEADVHTATPS+ NAAATWA WAVTAVT+KFYRSQS+
Sbjct: 528 KTIRGFLGKLEKVSEDPSLRETMEADVHTATPSIGNAAATWAGWAVTAVTAKFYRSQSD- 586
Query: 634 LKTSRGPTRPSGRFLSKPASLEASSASSMSTTTTASSVASLASSLEHEGEGGSASKGESM 693
+SR +GR LSKPASLE S+SS+STTT++ + +SLEHE SA S
Sbjct: 587 --SSRPRPPLTGRNLSKPASLEQPSSSSLSTTTSSVTS---MTSLEHESNDTSA----SA 637
Query: 694 SDYDETPWESETWGDMESSSNDTTKVGVLDPTSSQTTERQGGS--------DGGDGWDLD 745
SDY W++E WG+M++S DP+S G+ + DGWD +
Sbjct: 638 SDYGNNDWDNENWGEMDTSQ---------DPSSPLAASSNNGAMMAANALNEVRDGWDNE 688
Query: 746 DWRSL 750
+W SL
Sbjct: 689 EWGSL 693
|
Source: Drosophila ananassae Species: Drosophila ananassae Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 852 | ||||||
| FB|FBgn0260990 | 873 | yata "yata" [Drosophila melano | 0.765 | 0.746 | 0.548 | 1.7e-201 | |
| ZFIN|ZDB-GENE-030131-8915 | 855 | wu:fk36e11 "wu:fk36e11" [Danio | 0.644 | 0.642 | 0.493 | 1.9e-146 | |
| UNIPROTKB|Q96KG9 | 808 | SCYL1 "N-terminal kinase-like | 0.693 | 0.731 | 0.469 | 1.7e-143 | |
| UNIPROTKB|F1RRK0 | 807 | SCYL1 "Uncharacterized protein | 0.646 | 0.682 | 0.484 | 1.3e-141 | |
| UNIPROTKB|E2QUV4 | 791 | SCYL1 "Uncharacterized protein | 0.647 | 0.697 | 0.486 | 1.7e-141 | |
| UNIPROTKB|A6QLH6 | 807 | SCYL1 "N-terminal kinase-like | 0.693 | 0.732 | 0.465 | 2.1e-141 | |
| UNIPROTKB|F1MVK2 | 807 | SCYL1 "N-terminal kinase-like | 0.693 | 0.732 | 0.465 | 2.1e-141 | |
| RGD|1307330 | 807 | Scyl1 "SCY1-like 1 (S. cerevis | 0.647 | 0.684 | 0.485 | 2.1e-141 | |
| UNIPROTKB|Q5M9F8 | 807 | Scyl1 "N-terminal kinase-like | 0.647 | 0.684 | 0.485 | 2.1e-141 | |
| MGI|MGI:1931787 | 806 | Scyl1 "SCY1-like 1 (S. cerevis | 0.647 | 0.684 | 0.485 | 9.1e-141 |
| FB|FBgn0260990 yata "yata" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1863 (660.9 bits), Expect = 1.7e-201, Sum P(3) = 1.7e-201
Identities = 376/685 (54%), Positives = 479/685 (69%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND---SA 98
MW+FF RD+SKDF Y++GEP G F Q ++ W H K+K + E+V++F+ D +
Sbjct: 1 MWSFFSRDSSKDFPYDIGEPV----GGFDQ-YSIWTLHKAKRKTTLEEVSVFVYDIRSGS 55
Query: 99 DTY-EPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
DT E A + +K+LKTLRHPSIL +LDS+E+ ++Y+A E V+P+ + L +N
Sbjct: 56 DTKCELAKAALKRLKTLRHPSILQYLDSLETDK--MLYVATEAVDPLGTYFSK-LGSDNV 112
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASC 217
+K +Y++WGIFQITRALSFL ND +LRHN+V+ S+F+N+ GEWKLG LEY +S A
Sbjct: 113 QKGLYLAWGIFQITRALSFLNNDGNLRHNNVSAWSVFVNASGEWKLGSLEY---VSAADG 169
Query: 218 IPMKRYSRYEDQSTYQIPENS----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS 273
PM Y PE + L TKCS DM+GLG L+WE FNG L+ R +L
Sbjct: 170 NPMPPAKIPVTLEVYDSPEKNDPSKLKAATKCSVDMWGLGCLVWEAFNGVLKQ--RSNLK 227
Query: 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDK 333
+I++IP++L+ +Y EL+ P+ RPNPAD I R RKPGG+FKNDL+D LLFLEEIQ+KDK
Sbjct: 228 DIEHIPKSLQSLYCELVGASPSNRPNPADIITRCRKPGGFFKNDLVDTLLFLEEIQIKDK 287
Query: 334 IDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQ 393
+KN+FF+GL + +D FP + HK+LPQLI A+EYG+AG++VL+P+FK+G++L+ +YQ
Sbjct: 288 AEKNRFFSGLTTHLDNFPDNVCRHKILPQLITAYEYGDAGSAVLAPMFKLGKLLDEVEYQ 347
Query: 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQ 453
+IVPCVVKLF S DR TRSRLL QL+ FI H+ +VN+QIF QVA GFLDTN TIREQ
Sbjct: 348 KRIVPCVVKLFASTDRVTRSRLLQQLDLFIAHLQPQVVNDQIFPQVAHGFLDTNATIREQ 407
Query: 454 TVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV 513
TVKSIIHLAPKLNYNNLNVE LRHFARLQA+DDQGGIRTNTTVC+GKIA HLHPQ+RQ+V
Sbjct: 408 TVKSIIHLAPKLNYNNLNVEVLRHFARLQARDDQGGIRTNTTVCLGKIAPHLHPQVRQRV 467
Query: 514 LISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAF 573
L+SAF RAMRDPFPPAR AGVLALAATQQYFLLSEVA R+LP+LC L+ DPEK+VRD AF
Sbjct: 468 LVSAFIRAMRDPFPPARVAGVLALAATQQYFLLSEVANRVLPSLCSLTVDPEKTVRDPAF 527
Query: 574 KTIKGFLGKLEQVSENPSLRESMEADVHTATPSLSNXXXXXXXXXXXXXXSKFYRSQSET 633
KTI+GFLGKLE+VSE+PSLRE+MEADVHTATPS+ N +KFYRSQS++
Sbjct: 528 KTIRGFLGKLEKVSEDPSLRETMEADVHTATPSIGNAAATWAGWAVTAVTAKFYRSQSDS 587
Query: 634 LKTSRGPTRP-SGRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 692
SR P P +GR
Sbjct: 588 ---SR-PRPPLTGR-------NLSKPASLEQPSSSSLSTTTSSVTSMTSLEHESNDTSAS 636
Query: 693 XXDYDETPWESETWGDMESSSNDTT 717
DY W++E WG+M++S + ++
Sbjct: 637 ASDYGNNDWDNENWGEMDTSQDPSS 661
|
|
| ZFIN|ZDB-GENE-030131-8915 wu:fk36e11 "wu:fk36e11" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1338 (476.1 bits), Expect = 1.9e-146, Sum P(3) = 1.9e-146
Identities = 280/567 (49%), Positives = 371/567 (65%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND-SADT 100
MW+FF RD KDF YE+ SG W GK+K + E V++F+ + S T
Sbjct: 1 MWSFFARDPIKDFNYELLPENQEKSG-------IWTLSRGKRKSTGEPVSVFVYEVSQGT 53
Query: 101 YEP---ALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
E A + K+ KTLRHP+IL+++D +E+ KSL Y+ E V P+ HL E
Sbjct: 54 EEQTQLAKAAFKRTKTLRHPNILSYVDGLET-EKSL-YIVTEPVTPLAAHL-KLQAEKGG 110
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM-EKISEAS 216
+ +SWG+ QI +ALSFL+ND L HN++ ++F++ GEWKLGGL+++ + ++
Sbjct: 111 ASDLEVSWGLHQIVKALSFLVNDCHLNHNNLGMWAVFVDRAGEWKLGGLDHVTSEQGDSI 170
Query: 217 CIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNID 276
+P + D Y PE+ S K + D++ LG LIWEVFNG L + SL ++
Sbjct: 171 TLPPPKVIN-PDLERYDPPESPNSGGEKWTGDVWRLGCLIWEVFNGSLPRAS--SLRSLG 227
Query: 277 NIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKIDK 336
IP+ L Y EL+ P RPNPA F++ R PGG+ N +++ LFLEEIQ+K+ +K
Sbjct: 228 KIPKQLVPHYCELVGANPKIRPNPARFLLNCRSPGGFMNNSFVESCLFLEEIQIKEPAEK 287
Query: 337 NKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAKI 396
+FF L+ +D FP+ HKVLPQL+ AFE+G AGA VL+PLFK+G+ L E+YQ KI
Sbjct: 288 QQFFQDLSENLDSFPEDFCKHKVLPQLLTAFEFGNAGAVVLTPLFKVGKYLSAEEYQQKI 347
Query: 397 VPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVK 456
+P +VK+F S DRA R RLL Q+E FI ++ +A VN QIF V GF DTNP IREQTVK
Sbjct: 348 IPVIVKMFSSTDRAMRIRLLQQMEQFIQYLNEAAVNSQIFPHVVHGFTDTNPAIREQTVK 407
Query: 457 SIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLIS 516
S++ LAPKLN NLN E +RHFARLQA+DDQG IR NTTVC+GKIA +L+ +RQ+VLIS
Sbjct: 408 SMLLLAPKLNETNLNQELMRHFARLQARDDQGPIRCNTTVCLGKIAPYLNAGMRQRVLIS 467
Query: 517 AFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTI 576
AFSRA +DPFP +R AGVL AAT QY+ ++E A RILP LC L+ DP+K+VRD AFK I
Sbjct: 468 AFSRATKDPFPASRAAGVLGFAATHQYYSVAESANRILPTLCTLTVDPDKNVRDQAFKAI 527
Query: 577 KGFLGKLEQVSENPSLRESMEADVHTA 603
K FL KLE VSE+PS +E DV A
Sbjct: 528 KSFLSKLETVSEDPSKLTEIEKDVTAA 554
|
|
| UNIPROTKB|Q96KG9 SCYL1 "N-terminal kinase-like protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1330 (473.2 bits), Expect = 1.7e-143, Sum P(3) = 1.7e-143
Identities = 289/615 (46%), Positives = 377/615 (61%)
Query: 42 MWAFFGRDASKDFAYE-VGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND---- 96
MW FF RD +DF +E + EP G W H G+KK + V+IF+ D
Sbjct: 1 MW-FFARDPVRDFPFELIPEPP---EGGLPGP---WALHRGRKKATGSPVSIFVYDVKPG 53
Query: 97 SADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENN 156
+ + + A + K+ KTLRHP+IL ++D +E+ + +++ E V P+ +L + E
Sbjct: 54 AEEQTQVAKAAFKRFKTLRHPNILAYIDGLET--EKCLHVVTEAVTPLGIYLKARV-EAG 110
Query: 157 EKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKIS-EA 215
K++ ISWG+ QI +ALSFL+ND L HN+V ++F++ GEWKLGGL+YM
Sbjct: 111 GLKELEISWGLHQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNG 170
Query: 216 SCIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRKSLSN 274
P K E ++ ++S V K S DM+ LG LIWEVFNGPL +L N
Sbjct: 171 GGPPRKGIPELEQYDPPELADSSGRVVREKWSADMWRLGCLIWEVFNGPLPRA--AALRN 228
Query: 275 IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKI 334
IP+ L Y EL+ P RPNPA F+ R PGG+ N ++ LFLEEIQ+K+
Sbjct: 229 PGKIPKTLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMSNRFVETNLFLEEIQIKEPA 288
Query: 335 DKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQA 394
+K KFF L+ ++D FP+ HKVLPQL+ AFE+G AGA VL+PLFK+G+ L E+YQ
Sbjct: 289 EKQKFFQELSKSLDAFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQ 348
Query: 395 KIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQT 454
KI+P VVK+F S DRA R RLL Q+E FI ++ + VN QIF V GFLDTNP IREQT
Sbjct: 349 KIIPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQT 408
Query: 455 VKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVL 514
VKS++ LAPKLN NLNVE ++HFARLQAKD+QG IR NTTVC+GKI +L R +VL
Sbjct: 409 VKSMLLLAPKLNEANLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVL 468
Query: 515 ISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFK 574
SAFSRA RDPF P+R AGVL AAT + +++ AQ+ILP LC L+ DPEKSVRD AFK
Sbjct: 469 TSAFSRATRDPFAPSRVAGVLGFAATHNLYSMNDCAQKILPVLCGLTVDPEKSVRDQAFK 528
Query: 575 TIKGFLGKLEQVSENPSLRESMEADVHTAT-PSLSNXXXXXXX---XXXXXXXSKFYRSQ 630
I+ FL KLE VSE+P+ E +E DVH A+ P + SK RS
Sbjct: 529 AIRSFLSKLESVSEDPTQLEEVEKDVHAASSPGMGGAAASWAGWAVTGVSSLTSKLIRSH 588
Query: 631 SETLKTSRG-PTRPS 644
T T P RP+
Sbjct: 589 PTTAPTETNIPQRPT 603
|
|
| UNIPROTKB|F1RRK0 SCYL1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1309 (465.8 bits), Expect = 1.3e-141, Sum P(3) = 1.3e-141
Identities = 276/570 (48%), Positives = 364/570 (63%)
Query: 42 MWAFFGRDASKDFAYEVG-EPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND---- 96
MW FF RD +DF +E+ EP G W H G+KK + V+IF+ D
Sbjct: 1 MW-FFARDPVRDFPFELSPEPP---EGSPPGP---WALHRGRKKATGSPVSIFVYDVKPG 53
Query: 97 SADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENN 156
+ + + A + K+LKTLRHP+IL ++D +E+ + +++ E V P+ +L E
Sbjct: 54 AEEQTQVAKAAFKRLKTLRHPNILAYIDGLET--EKCLHVVTEAVTPLAAYL-KARTETG 110
Query: 157 EKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKIS-EA 215
+ +++ +SWG+ QI +ALSFL+ND L HN+V ++F++ GEWKLGGL+YM
Sbjct: 111 DLREMELSWGLHQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNG 170
Query: 216 SCIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRKSLSN 274
P K E ++ + S V K S DM+ LG LIWEVFNGPL +L N
Sbjct: 171 GGPPRKGVPELEQYDPPELADGSGKAVREKWSADMWRLGCLIWEVFNGPLPRA--AALRN 228
Query: 275 IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKI 334
IP++L Y EL+ P RPNPA F+ R PGG+ N ++ LFLEEIQ+K+
Sbjct: 229 PGKIPKSLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMNNRFVETNLFLEEIQIKEPA 288
Query: 335 DKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQA 394
+K KFF L+ ++D FP+ HKVLPQL+ AFE+G AGA VL+PLFK+G+ L E+YQ
Sbjct: 289 EKQKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQ 348
Query: 395 KIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQT 454
KIVP VVK+F S DRA R RLL Q+E FI ++ + VN QIF V GFLDTNP IREQT
Sbjct: 349 KIVPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQT 408
Query: 455 VKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVL 514
VKS++ LAPKLN NLNVE ++HFARLQAKD+QG IR NTTVC+GKI +L R +VL
Sbjct: 409 VKSMLLLAPKLNEANLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVL 468
Query: 515 ISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFK 574
SAFSRA +DPF P+R AGVL AAT + +++ A +ILP LC L+ DPEKSVRD AFK
Sbjct: 469 TSAFSRATKDPFAPSRVAGVLGFAATHNLYSMTDCAHKILPVLCGLTVDPEKSVRDQAFK 528
Query: 575 TIKGFLGKLEQVSENPSLRESMEADVHTAT 604
I+ FL KLE VSE+P+ +E DVH A+
Sbjct: 529 AIRSFLSKLESVSEDPTQLAEVEKDVHAAS 558
|
|
| UNIPROTKB|E2QUV4 SCYL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1303 (463.7 bits), Expect = 1.7e-141, Sum P(3) = 1.7e-141
Identities = 277/569 (48%), Positives = 363/569 (63%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND---SA 98
MW FF RD +DF +E+ P G W H G+KK + V+IF+ D A
Sbjct: 1 MW-FFARDPVRDFPFELS-PDPPEGG----PPGPWVLHRGRKKATGSPVSIFVYDVKPGA 54
Query: 99 DTY-EPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
D + A + K+LKTLRHP+IL ++D +E+ K L ++ E V P+ +L E
Sbjct: 55 DEQTQVAKAAFKRLKTLRHPNILAYIDGLET-DKCL-HVVTEAVTPLGMYLKERA-EAGG 111
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKIS-EAS 216
K++ +SWG+ QI +ALSFL+ND L HN++ ++F++ GEWKLGGL+YM
Sbjct: 112 LKELELSWGLHQIVKALSFLVNDCSLIHNNICMAAVFVDRAGEWKLGGLDYMYSAQGNGG 171
Query: 217 CIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI 275
P K E ++ + S V K S DM+ LG LIWEVFNGPL +L N
Sbjct: 172 GPPRKGVPELEQYDPPELADGSGRAVREKWSADMWRLGCLIWEVFNGPLPRA--AALRNP 229
Query: 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKID 335
IP++L Y EL+ P RPNPA F+ R PGG+ N ++ LFLEEIQ+K+ +
Sbjct: 230 GKIPKSLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMNNRFVETNLFLEEIQIKEPAE 289
Query: 336 KNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAK 395
K KFF L+ ++D FP+ H+VLPQL+ AFE+G AGA VL+PLFK+G+ L E+YQ K
Sbjct: 290 KQKFFQELSKSLDSFPEDFCRHRVLPQLLTAFEFGNAGAVVLTPLFKVGKFLNAEEYQQK 349
Query: 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTV 455
I+P VVK+F S DRA R RLL Q+E FI ++ + VN QIF V GFLDTNP IREQTV
Sbjct: 350 IIPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQTV 409
Query: 456 KSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLI 515
KS++ LAPKLN NLNVE ++HFARLQAKD+QG IR NTTVC+GKI +L+ R +VL
Sbjct: 410 KSMLLLAPKLNEANLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLNASTRHRVLT 469
Query: 516 SAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKT 575
SAFSRA +DPF P+R AGVL AAT + +++ A +ILP LC L+ DPEKSVRD AFK
Sbjct: 470 SAFSRATKDPFAPSRVAGVLGFAATHNLYSMNDCAHKILPVLCGLTVDPEKSVRDQAFKA 529
Query: 576 IKGFLGKLEQVSENPSLRESMEADVHTAT 604
I+ FL KLE VSE+P+ +E DVH A+
Sbjct: 530 IRSFLSKLESVSEDPTQLAEVEKDVHAAS 558
|
|
| UNIPROTKB|A6QLH6 SCYL1 "N-terminal kinase-like protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1311 (466.6 bits), Expect = 2.1e-141, Sum P(3) = 2.1e-141
Identities = 286/615 (46%), Positives = 376/615 (61%)
Query: 42 MWAFFGRDASKDFAYEVG-EPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND---- 96
MW FF RD +DF +E+ EP G W H G+KK + V+IF+ D
Sbjct: 1 MW-FFARDPVRDFPFELSPEPP---EGSPPGP---WVLHRGRKKATGSPVSIFVYDVKPV 53
Query: 97 SADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENN 156
+ + + A + K+LKTLRHP+IL ++D +E+ K L ++ E V P+ +L E
Sbjct: 54 AEEQTQVAKAAFKRLKTLRHPNILAYIDGLET-DKCL-HVVTEAVTPLGVYL-KARAEAG 110
Query: 157 EKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKIS-EA 215
K++ +SWG+ QI +ALSFL+ND L HN+V ++F++ GEWKLGGL+YM
Sbjct: 111 GLKELELSWGLHQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNG 170
Query: 216 SCIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRKSLSN 274
P K E ++ + S V K S DM+ LG LIWEVFNGPL +L N
Sbjct: 171 GGPPRKGIPELEQYDPPELADGSGRAVREKWSADMWRLGCLIWEVFNGPLPRA--AALRN 228
Query: 275 IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKI 334
IP++L Y EL+ P RPNPA F+ R PGG+ N ++ LFLEEIQ+K+
Sbjct: 229 PGKIPKSLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMNNRFVETNLFLEEIQIKEPA 288
Query: 335 DKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQA 394
+K KFF L+ ++D FP+ HKVLPQL+ AFE+G AGA VL+PLFK+G+ L E+YQ
Sbjct: 289 EKQKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGSAGAVVLTPLFKVGKFLNAEEYQQ 348
Query: 395 KIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQT 454
KI+P VVK+F S DRA R RLL Q+E FI ++ + VN QIF V GFLDTNP IREQT
Sbjct: 349 KIIPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQT 408
Query: 455 VKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVL 514
VKS++ LAPKLN NLNVE ++HFARLQAKD+QG IR NTTVC+GKI +L R +VL
Sbjct: 409 VKSMLLLAPKLNETNLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVL 468
Query: 515 ISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFK 574
SAFSRA +DPF P+R AGVL AAT + +++ A +ILP LC L+ DPEKSVRD AFK
Sbjct: 469 TSAFSRATKDPFAPSRVAGVLGFAATHNLYSMNDCAHKILPVLCGLTVDPEKSVRDQAFK 528
Query: 575 TIKGFLGKLEQVSENPSLRESMEADVHTAT-PSLSNXXXXXXX---XXXXXXXSKFYRSQ 630
I+ FL KLE VSE+P+ +E DVH A+ P + SK R+
Sbjct: 529 AIRSFLSKLESVSEDPTQLAEVEKDVHAASSPGMGGAAASWAGWAVTGVSSLTSKLIRAH 588
Query: 631 -SETLKTSRGPTRPS 644
+ L + P RP+
Sbjct: 589 PTAALAETNVPQRPA 603
|
|
| UNIPROTKB|F1MVK2 SCYL1 "N-terminal kinase-like protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1311 (466.6 bits), Expect = 2.1e-141, Sum P(3) = 2.1e-141
Identities = 286/615 (46%), Positives = 376/615 (61%)
Query: 42 MWAFFGRDASKDFAYEVG-EPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND---- 96
MW FF RD +DF +E+ EP G W H G+KK + V+IF+ D
Sbjct: 1 MW-FFARDPVRDFPFELSPEPP---EGSPPGP---WVLHRGRKKATGSPVSIFVYDVKPG 53
Query: 97 SADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENN 156
+ + + A + K+LKTLRHP+IL ++D +E+ K L ++ E V P+ +L E
Sbjct: 54 AEEQTQVAKAAFKRLKTLRHPNILAYIDGLET-DKCL-HVVTEAVTPLGVYL-KARAEAG 110
Query: 157 EKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKIS-EA 215
K++ +SWG+ QI +ALSFL+ND L HN+V ++F++ GEWKLGGL+YM
Sbjct: 111 GLKELELSWGLHQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNG 170
Query: 216 SCIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRKSLSN 274
P K E ++ + S V K S DM+ LG LIWEVFNGPL +L N
Sbjct: 171 GGPPRKGIPELEQYDPPELADGSGRAVREKWSADMWRLGCLIWEVFNGPLPRA--AALRN 228
Query: 275 IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKI 334
IP++L Y EL+ P RPNPA F+ R PGG+ N ++ LFLEEIQ+K+
Sbjct: 229 PGKIPKSLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMNNRFVETNLFLEEIQIKEPA 288
Query: 335 DKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQA 394
+K KFF L+ ++D FP+ HKVLPQL+ AFE+G AGA VL+PLFK+G+ L E+YQ
Sbjct: 289 EKQKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGSAGAVVLTPLFKVGKFLNAEEYQQ 348
Query: 395 KIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQT 454
KI+P VVK+F S DRA R RLL Q+E FI ++ + VN QIF V GFLDTNP IREQT
Sbjct: 349 KIIPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQT 408
Query: 455 VKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVL 514
VKS++ LAPKLN NLNVE ++HFARLQAKD+QG IR NTTVC+GKI +L R +VL
Sbjct: 409 VKSMLLLAPKLNETNLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVL 468
Query: 515 ISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFK 574
SAFSRA +DPF P+R AGVL AAT + +++ A +ILP LC L+ DPEKSVRD AFK
Sbjct: 469 TSAFSRATKDPFAPSRVAGVLGFAATHNLYSMNDCAHKILPVLCGLTVDPEKSVRDQAFK 528
Query: 575 TIKGFLGKLEQVSENPSLRESMEADVHTAT-PSLSNXXXXXXX---XXXXXXXSKFYRSQ 630
I+ FL KLE VSE+P+ +E DVH A+ P + SK R+
Sbjct: 529 AIRSFLSKLESVSEDPTQLAEVEKDVHAASSPGMGGAAASWAGWAVTGVSSLTSKLIRAH 588
Query: 631 -SETLKTSRGPTRPS 644
+ L + P RP+
Sbjct: 589 PTAALAETNVPQRPA 603
|
|
| RGD|1307330 Scyl1 "SCY1-like 1 (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1307 (465.1 bits), Expect = 2.1e-141, Sum P(3) = 2.1e-141
Identities = 276/569 (48%), Positives = 363/569 (63%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND----S 97
MW FF RD +DF +E+ P G W H G+KK + V+IF+ D +
Sbjct: 1 MW-FFARDPVRDFPFELN-PEPPEGG----PPGPWVLHRGRKKATGSAVSIFVYDVKPGA 54
Query: 98 ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
+ + A + K+LKTLRHP+IL ++D +E+ + +++ E V P+ +L +
Sbjct: 55 EEQTQVAKAAFKRLKTLRHPNILAYIDGLET--EKCLHIVTEAVTPLGTYLKARAEAGGL 112
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKIS-EAS 216
K+Q +SWG+ QI +ALSFL+ND +L HN+V ++F++ GEWKLGGL+YM
Sbjct: 113 KEQ-ELSWGLHQIVKALSFLVNDCNLIHNNVCMAAVFVDKAGEWKLGGLDYMYSAQGNGG 171
Query: 217 CIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI 275
P K E ++ ++S V K S DM+ LG LIWEVFNG L +L N
Sbjct: 172 GPPNKGIPELEQYDPPELADSSSRAVKEKWSADMWRLGCLIWEVFNGSLPRAT--ALRNP 229
Query: 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKID 335
IP++L Y EL+ P RPNPA F+ R PGG+ N ++ LFLEEIQ+K+ +
Sbjct: 230 GKIPKSLVTHYCELVGANPKVRPNPARFLQNCRAPGGFMSNRFVETNLFLEEIQIKEPAE 289
Query: 336 KNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAK 395
K KFF L+ ++D FP+ HKVLPQL+ AFE+G AGA VL+PLFK+G+ L E+YQ K
Sbjct: 290 KQKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQK 349
Query: 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTV 455
I+P VVK+F S DRA R RLL Q+E FI ++ + VN QIF V GFLDTNP IREQTV
Sbjct: 350 IIPVVVKMFSSTDRAMRVRLLQQMEQFIQYLDEPTVNTQIFPHVTHGFLDTNPAIREQTV 409
Query: 456 KSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLI 515
KS++ LAPKL+ NLNVE L+HFARLQAKDDQG IR NTTVC+GKI +L R +VL
Sbjct: 410 KSMLLLAPKLSETNLNVELLKHFARLQAKDDQGPIRCNTTVCLGKIGSYLSASTRHRVLT 469
Query: 516 SAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKT 575
SAFSRA +DPF P+R AGVL AAT + + + A +ILP LC L+ DPEKSVRD AFKT
Sbjct: 470 SAFSRATKDPFAPSRVAGVLGFAATHNLYSMDDCAHKILPVLCGLTVDPEKSVRDQAFKT 529
Query: 576 IKGFLGKLEQVSENPSLRESMEADVHTAT 604
I+ FL KLE VSE+P+ +E DVH A+
Sbjct: 530 IRSFLSKLESVSEDPTQLAEIEKDVHAAS 558
|
|
| UNIPROTKB|Q5M9F8 Scyl1 "N-terminal kinase-like protein" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1307 (465.1 bits), Expect = 2.1e-141, Sum P(3) = 2.1e-141
Identities = 276/569 (48%), Positives = 363/569 (63%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND----S 97
MW FF RD +DF +E+ P G W H G+KK + V+IF+ D +
Sbjct: 1 MW-FFARDPVRDFPFELN-PEPPEGG----PPGPWVLHRGRKKATGSAVSIFVYDVKPGA 54
Query: 98 ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
+ + A + K+LKTLRHP+IL ++D +E+ + +++ E V P+ +L +
Sbjct: 55 EEQTQVAKAAFKRLKTLRHPNILAYIDGLET--EKCLHIVTEAVTPLGTYLKARAEAGGL 112
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKIS-EAS 216
K+Q +SWG+ QI +ALSFL+ND +L HN+V ++F++ GEWKLGGL+YM
Sbjct: 113 KEQ-ELSWGLHQIVKALSFLVNDCNLIHNNVCMAAVFVDKAGEWKLGGLDYMYSAQGNGG 171
Query: 217 CIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI 275
P K E ++ ++S V K S DM+ LG LIWEVFNG L +L N
Sbjct: 172 GPPNKGIPELEQYDPPELADSSSRAVKEKWSADMWRLGCLIWEVFNGSLPRAT--ALRNP 229
Query: 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKID 335
IP++L Y EL+ P RPNPA F+ R PGG+ N ++ LFLEEIQ+K+ +
Sbjct: 230 GKIPKSLVTHYCELVGANPKVRPNPARFLQNCRAPGGFMSNRFVETNLFLEEIQIKEPAE 289
Query: 336 KNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAK 395
K KFF L+ ++D FP+ HKVLPQL+ AFE+G AGA VL+PLFK+G+ L E+YQ K
Sbjct: 290 KQKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQK 349
Query: 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTV 455
I+P VVK+F S DRA R RLL Q+E FI ++ + VN QIF V GFLDTNP IREQTV
Sbjct: 350 IIPVVVKMFSSTDRAMRVRLLQQMEQFIQYLDEPTVNTQIFPHVTHGFLDTNPAIREQTV 409
Query: 456 KSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLI 515
KS++ LAPKL+ NLNVE L+HFARLQAKDDQG IR NTTVC+GKI +L R +VL
Sbjct: 410 KSMLLLAPKLSETNLNVELLKHFARLQAKDDQGPIRCNTTVCLGKIGSYLSASTRHRVLT 469
Query: 516 SAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKT 575
SAFSRA +DPF P+R AGVL AAT + + + A +ILP LC L+ DPEKSVRD AFKT
Sbjct: 470 SAFSRATKDPFAPSRVAGVLGFAATHNLYSMDDCAHKILPVLCGLTVDPEKSVRDQAFKT 529
Query: 576 IKGFLGKLEQVSENPSLRESMEADVHTAT 604
I+ FL KLE VSE+P+ +E DVH A+
Sbjct: 530 IRSFLSKLESVSEDPTQLAEIEKDVHAAS 558
|
|
| MGI|MGI:1931787 Scyl1 "SCY1-like 1 (S. cerevisiae)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1305 (464.4 bits), Expect = 9.1e-141, Sum P(3) = 9.1e-141
Identities = 276/569 (48%), Positives = 363/569 (63%)
Query: 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLND----S 97
MW FF RD +DF +E+ P G W H G+KK + V+IF+ D +
Sbjct: 1 MW-FFARDPVRDFPFELS-PEPPEGG----PPGPWILHRGRKKATGSAVSIFVYDVKPGA 54
Query: 98 ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE 157
+ + A + K+LKTLRHP+IL ++D +E+ + +++ E V P+ +L +
Sbjct: 55 EEQTQVAKAAFKRLKTLRHPNILAYIDGLET--EKCLHIVTEAVTPLGTYLKARAEAGGL 112
Query: 158 KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKIS-EAS 216
K+Q +SWG+ QI +ALSFL+ND +L HN+V ++F++ GEWKLGGL+YM
Sbjct: 113 KEQ-ELSWGLHQIVKALSFLVNDCNLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNGG 171
Query: 217 CIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI 275
P K E ++ ++S V K S DM+ LG LIWEVFNG L +L N
Sbjct: 172 GPPSKGIPELEQYDPPELADSSSRAVREKWSADMWRLGCLIWEVFNGSLPRA--AALRNP 229
Query: 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKID 335
IP++L Y EL+ P RPNPA F+ R PGG+ N ++ LFLEEIQ+K+ +
Sbjct: 230 GKIPKSLVTHYCELVGANPKVRPNPARFLQNCRAPGGFMSNRFVETNLFLEEIQIKEPAE 289
Query: 336 KNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAK 395
K KFF L+ ++D FP+ HKVLPQL+ AFE+G AGA VL+PLFK+G+ L E+YQ K
Sbjct: 290 KQKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKSLRAEEYQEK 349
Query: 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTV 455
I+P VVK+F S DRA R RLL Q+E FI ++ + VN QIF V GFLDTNP IREQTV
Sbjct: 350 IIPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVTHGFLDTNPAIREQTV 409
Query: 456 KSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLI 515
KS++ LAPKLN NLNVE ++HFARLQAKDDQG IR NTTVC+GKI +L R +VL
Sbjct: 410 KSMLLLAPKLNEANLNVELMKHFARLQAKDDQGPIRCNTTVCLGKIGSYLSASTRHRVLT 469
Query: 516 SAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKT 575
SAFSRA +DPF P+R AGVL AAT + + + A +ILP LC L+ DPEKSVRD AFKT
Sbjct: 470 SAFSRATKDPFAPSRVAGVLGFAATHNLYSMDDCAHKILPVLCGLTVDPEKSVRDQAFKT 529
Query: 576 IKGFLGKLEQVSENPSLRESMEADVHTAT 604
I+ FL KLE VSE+P+ +E DVH A+
Sbjct: 530 IRSFLSKLESVSEDPTQLAEVEKDVHAAS 558
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q5M9F8 | NTKL_RAT | No assigned EC number | 0.4115 | 0.9025 | 0.9529 | yes | N/A |
| Q28FH2 | NTKL_XENTR | No assigned EC number | 0.4144 | 0.9131 | 0.9407 | yes | N/A |
| A6QLH6 | NTKL_BOVIN | No assigned EC number | 0.4368 | 0.8016 | 0.8463 | yes | N/A |
| Q9EQC5 | NTKL_MOUSE | No assigned EC number | 0.4018 | 0.9037 | 0.9553 | yes | N/A |
| Q96KG9 | NTKL_HUMAN | No assigned EC number | 0.4115 | 0.9037 | 0.9529 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 852 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 5e-09 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 8e-08 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 2e-05 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 2e-05 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 7e-05 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-04 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 2e-04 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 3e-04 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 3e-04 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 4e-04 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 0.002 | |
| pfam02985 | 31 | pfam02985, HEAT, HEAT repeat | 0.003 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 0.003 | |
| pfam13513 | 55 | pfam13513, HEAT_EZ, HEAT-like repeat | 0.003 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 5e-09
Identities = 45/233 (19%), Positives = 95/233 (40%), Gaps = 41/233 (17%)
Query: 81 GKKKGSNEKV---TIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLA 137
+ K + +KV I DS+ E L ++ LK L HP+I+ E + +YL
Sbjct: 12 ARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENH--LYLV 69
Query: 138 VEYVEP--IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI 195
+EY E + L + +E + + I + QI L +L + + H + +I +
Sbjct: 70 MEYCEGGSLKDLLKENEGKLSEDEILRI---LLQILEGLEYL-HSNGIIHRDLKPENILL 125
Query: 196 NS-CGEWKLGGLEYMEKISEASCIPM-KRYSRYEDQSTYQIPE--NSLSHVTKCSTDMYG 251
+S G+ KL + ++ + + Y PE + ++ +D++
Sbjct: 126 DSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA-----YMAPEVLLGKGYYSE-KSDIWS 179
Query: 252 LGILIWEVFNGPLQSTNRKSLSNIDNIPENLKRVYLELISERPNQRPNPADFI 304
LG++++E+ LK + +++ + P +RP+ + +
Sbjct: 180 LGVILYEL--------------------PELKDLIRKMLQKDPEKRPSAKEIL 212
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 8e-08
Identities = 50/259 (19%), Positives = 95/259 (36%), Gaps = 60/259 (23%)
Query: 81 GKKKGSNEKVTI--FLNDSAD--TYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYL 136
K KG+ + V + S + A ++ L+ L HP+I+ +D+ E +YL
Sbjct: 18 AKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDH--LYL 75
Query: 137 AVEYVEPI-FYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNH-VNHT--- 191
+EY E + + +E + I+ QI R L +L H++ + H
Sbjct: 76 VMEYCEGGDLFDYLSRGGPLSEDEAKKIAL---QILRGLEYL-------HSNGIIHRDLK 125
Query: 192 --SIFINSCGEWKLG--GLEYMEKISEASCIPMKRYSRYEDQ---STYQIPE---NSLSH 241
+I ++ G K+ GL + +K S Y PE +
Sbjct: 126 PENILLDENGVVKIADFGL---------AKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGY 176
Query: 242 VTKCSTDMYGLGILIWEVFNG--PLQSTNRK----------------SLSNIDNIPENLK 283
K D++ LG++++E+ G P N + E K
Sbjct: 177 GPKV--DVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAK 234
Query: 284 RVYLELISERPNQRPNPAD 302
+ + +++ P++RP +
Sbjct: 235 DLIKKCLNKDPSKRPTAEE 253
|
Length = 260 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 2e-05
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 22/166 (13%)
Query: 104 ALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKE-----NNEK 158
A+ V LK L+H +I+T D + + + L +F +LD+ LK+ N
Sbjct: 50 AIREVSLLKNLKHANIVTLHDIIHT-ERCLTL--------VFEYLDSDLKQYLDNCGNLM 100
Query: 159 KQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCI 218
+ +FQ+ R LS+ + + H + ++ IN GE KL ++ A +
Sbjct: 101 SMHNVKIFMFQLLRGLSY-CHKRKILHRDLKPQNLLINEKGELKLADF----GLARAKSV 155
Query: 219 PMKRYSRYEDQSTYQIPENSLSHVTKCST--DMYGLGILIWEVFNG 262
P K YS E + + P + L T+ ST DM+G+G +++E+ G
Sbjct: 156 PTKTYSN-EVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATG 200
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 46.3 bits (111), Expect = 2e-05
Identities = 61/248 (24%), Positives = 97/248 (39%), Gaps = 61/248 (24%)
Query: 89 KVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFY 146
K N S E AL+ VK LK L HP+I+ + +S E K + + +EY + +
Sbjct: 31 KEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFE--EKGKLCIVMEYADGGDLSQ 88
Query: 147 HLDNTLKENN--EKKQIYISWGIF-QITRALSFLINDADLRH-NHVNH----TS-IFINS 197
+ KE ++QI F Q+ AL +L H + H IF+ S
Sbjct: 89 KIKKQKKEGKPFPEEQI---LDWFVQLCLALKYL-------HSRKILHRDIKPQNIFLTS 138
Query: 198 CGEWKLG--GLEYMEKISEASCIPMKRYSRYEDQSTYQI-------PE--NSLSHVTKCS 246
G KLG G IS K S D + + PE + + K
Sbjct: 139 NGLVKLGDFG------IS-------KVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYK-- 183
Query: 247 TDMYGLGILIWEVFNG--PLQSTNRKSLSN------IDNIPE----NLKRVYLELISERP 294
+D++ LG +++E+ P + N L+ IP L+ + L+ + P
Sbjct: 184 SDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDP 243
Query: 295 NQRPNPAD 302
+RP+ A
Sbjct: 244 EERPSIAQ 251
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 7e-05
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 104 ALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKE-----NNEK 158
A+ V LK L+H +I+T D + + KSL +F +LD LK+ N
Sbjct: 51 AIREVSLLKDLKHANIVTLHDIIHT-EKSLTL--------VFEYLDKDLKQYLDDCGNSI 101
Query: 159 KQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCI 218
+ +FQ+ R L++ + + H + ++ IN GE KL ++ A I
Sbjct: 102 NMHNVKLFLFQLLRGLNY-CHRRKVLHRDLKPQNLLINERGELKLADF----GLARAKSI 156
Query: 219 PMKRYSRYEDQSTYQIPENSLSHVTKCST--DMYGLGILIWEVFNG-PL 264
P K YS E + + P + L T ST DM+G+G + +E+ G PL
Sbjct: 157 PTKTYSN-EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPL 204
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 44.4 bits (106), Expect = 1e-04
Identities = 49/247 (19%), Positives = 88/247 (35%), Gaps = 52/247 (21%)
Query: 81 GKKKGSNEKV---TIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLA 137
+ K + + V I E L +K LK L+HP+I+ D E K +YL
Sbjct: 18 ARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDK--LYLV 75
Query: 138 VEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRH-NHVNHT--- 191
+EY E +F L + + ++ + Y + QI AL +L H + H
Sbjct: 76 MEYCEGGDLFDLLKKRGRLSEDEARFY----LRQILSALEYL-------HSKGIVHRDLK 124
Query: 192 --SIFINSCGEWKLG--GLEYMEKISEASCIPMKRYS----RYEDQSTYQIPE--NSLSH 241
+I ++ G KL GL + K + Y PE +
Sbjct: 125 PENILLDEDGHVKLADFGL------ARQLDPGEKLTTFVGTPE-----YMAPEVLLGKGY 173
Query: 242 VTKCSTDMYGLGILIWEVFNG--PLQSTNRKSLSNIDNIPENLKRVYLELISERPNQRPN 299
D++ LG++++E+ G P + + + + + + + P
Sbjct: 174 GKAV--DIWSLGVILYELLTGKPPFPGDD-----QLLELFKKIGKPKPPFPPPEWDISPE 226
Query: 300 PADFIMR 306
D I +
Sbjct: 227 AKDLIRK 233
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 2e-04
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 23/169 (13%)
Query: 104 ALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKE-----NNEK 158
A+ V LK L+H +I+T D V + KSL +F +LD LK+ N
Sbjct: 51 AIREVSLLKDLKHANIVTLHDIVHT-DKSLTL--------VFEYLDKDLKQYMDDCGNIM 101
Query: 159 KQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCI 218
+ ++QI R L++ + + H + ++ IN GE KL ++ A +
Sbjct: 102 SMHNVKIFLYQILRGLAY-CHRRKVLHRDLKPQNLLINERGELKLADF----GLARAKSV 156
Query: 219 PMKRYSRYEDQSTYQIPENSLSHVTKCST--DMYGLGILIWEVFNG-PL 264
P K YS E + + P + L ++ ST DM+G+G + +E+ +G PL
Sbjct: 157 PTKTYSN-EVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPL 204
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 3e-04
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 24/167 (14%)
Query: 104 ALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEP-IFYHLD---NTLKENNEKK 159
A+ LK L+H +I+T D + + K+L L EY++ + ++D L +N +
Sbjct: 50 AIREASLLKDLKHANIVTLHDIIHT-KKTLT-LVFEYLDTDLKQYMDDCGGGLSMHNVR- 106
Query: 160 QIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG--GLEYMEKISEASC 217
++ +FQ+ R L++ + + H + ++ I+ GE KL GL + A
Sbjct: 107 -LF----LFQLLRGLAY-CHQRRVLHRDLKPQNLLISERGELKLADFGL------ARAKS 154
Query: 218 IPMKRYSRYEDQSTYQIPENSLSHVTKCST--DMYGLGILIWEVFNG 262
+P K YS E + + P + L T+ ST DM+G+G + +E+ G
Sbjct: 155 VPSKTYSN-EVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATG 200
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 3e-04
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 30/197 (15%)
Query: 82 KKKGSNEKVTI--FL--NDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLA 137
+ K + E V I F D D + AL VK L+ LRH +I+ ++ + +YL
Sbjct: 21 RNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGR--LYLV 78
Query: 138 VEYVEPIFYHLDNTLKENNEKKQ-----IYISWGIFQITRALSFLINDADLRHNHVNHTS 192
EYVE TL E E + I+Q+ +A+++ + ++ H + +
Sbjct: 79 FEYVE-------RTLLELLEASPGGLPPDAVRSYIWQLLQAIAYC-HSHNIIHRDIKPEN 130
Query: 193 IFINSCGEWKL---GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTD 248
I ++ G KL G + P + Y Y+ PE + D
Sbjct: 131 ILVSESGVLKLCDFGFARAL------RARPASPLTDYVATRWYRAPELLVGDTNYGKPVD 184
Query: 249 MYGLGILIWEVFNG-PL 264
++ +G ++ E+ +G PL
Sbjct: 185 VWAIGCIMAELLDGEPL 201
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.9 bits (102), Expect = 4e-04
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 47/172 (27%)
Query: 104 ALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNEK----- 158
AL + LK L+HP+I+ LD + + K +YL EY + L L +
Sbjct: 45 ALREISLLKELKHPNIVKLLDVIHTERK--LYLVFEYCD---MDLKKYLDKRPGPLSPNL 99
Query: 159 -KQIYISWGIFQITRALSFLINDADLRHNH-VNH-----TSIFINSCGEWKLG--GLEYM 209
K I ++Q+ R L++ H+H + H +I IN G KL GL
Sbjct: 100 IKSI-----MYQLLRGLAYC-------HSHRILHRDLKPQNILINRDGVLKLADFGL--- 144
Query: 210 EKISEASCIPMKRYSRYEDQST--YQIPENSLSHVTKCSTDMYGLGILIWEV 259
+ A IP++ Y+ + T Y+ PE L + Y + IW V
Sbjct: 145 ---ARAFGIPLRTYT--HEVVTLWYRAPEILL------GSKHYSTAVDIWSV 185
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 41.3 bits (95), Expect = 0.002
Identities = 54/307 (17%), Positives = 103/307 (33%), Gaps = 23/307 (7%)
Query: 94 LNDSADTYEPALSYVKKLKTLRHPS-ILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDN 150
L + E L ++ L +L HP I+ D + YL +EYV+ + L
Sbjct: 34 LESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSL--YLVMEYVDGGSLEDLLKK 91
Query: 151 TLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEW-KLGGLEYM 209
++ + + + QI AL +L + + H + +I ++ G KL
Sbjct: 92 IGRKGPLSESEALFI-LAQILSALEYL-HSKGIIHRDIKPENILLDRDGRVVKLIDFGLA 149
Query: 210 EKISEASCIPMKRYSRYEDQST--YQIPENSLSHVTK---CSTDMYGLGILIWEVFNGPL 264
+ + + T Y PE L S+D++ LGI ++E+ G
Sbjct: 150 KLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLP 209
Query: 265 QSTNRKSLSNIDNIPENLKRVYLELISERPNQRPNPA------DFIMR--NRKPGGYF-- 314
K+ S + + + ++ + D + + + P
Sbjct: 210 PFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSS 269
Query: 315 KNDLIDALLFLEEIQMKDKIDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGA 374
+DL LL +++ D D K + + P L + L L + +
Sbjct: 270 SSDLSHDLLAHLKLKESDLSDLLKPDDSAPLRLSLPPSLEALISSLNSLAISGSDLKLDD 329
Query: 375 SVLSPLF 381
S S
Sbjct: 330 SNFSKEL 336
|
Length = 384 |
| >gnl|CDD|202500 pfam02985, HEAT, HEAT repeat | Back alignment and domain information |
|---|
Score = 35.6 bits (83), Expect = 0.003
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 553 ILPALCQLSTDPEKSVRDSAFKTIKGFL 580
+LP L +L DP+ VR++A + +
Sbjct: 1 LLPLLLELLNDPDPEVREAAAEALGALA 28
|
The HEAT repeat family is related to armadillo/beta-catenin-like repeats (see pfam00514). Length = 31 |
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.003
Identities = 40/242 (16%), Positives = 65/242 (26%), Gaps = 26/242 (10%)
Query: 555 PALCQLSTDPEKSVRDSAFKTIKGFLGKLEQVSENPSLRESMEADVHTATPSLSNAAATW 614
PA S P+ S + + + A ++ + ++
Sbjct: 123 PASPPPSPAPDLS---EMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSS- 178
Query: 615 ADWAVTAVTSKFYRSQSETLKTSRGPTRPSGRFLSKPASLEASSASSMSTTTTASSVASL 674
+ A +S T P S P S ASS + + A +
Sbjct: 179 PEETARAPSSP---PAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGAS 235
Query: 675 ASSLEHEGEGGSASKGESMSDYDETPWESETWGDMESSSNDTTKVGVLDPTSSQTTERQG 734
+S G E +E P + + G P+S
Sbjct: 236 SSDSSSSESSGCGWGPE-----NECPLPRPAPITLPTRIW--EASGWNGPSSRPGPASSS 288
Query: 735 GSDGGDGWDLDDWRSLEDTPSPSMPPPLQPSQSWAMSNSLSAMSLQENGLTSPSSDVNST 794
S PSPS P + S S+ S +E+ +S SS S+
Sbjct: 289 SSPRERS------------PSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESS 336
Query: 795 GG 796
G
Sbjct: 337 RG 338
|
Length = 1352 |
| >gnl|CDD|205691 pfam13513, HEAT_EZ, HEAT-like repeat | Back alignment and domain information |
|---|
Score = 36.3 bits (84), Expect = 0.003
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 527 PPARNAGVLALAATQQ--YFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTI 576
R A LAL A LL +LPAL L D + VR++A +
Sbjct: 1 WEVREAAALALGALAGGGPELLRPAVPELLPALLPLLKDDDDEVREAAAWAL 52
|
The HEAT repeat family is related to armadillo/beta-catenin-like repeats (see pfam00514). These EZ repeats are found in subunits of cyanobacterial phycocyanin lyase and other proteins and probably carry out a scaffolding role. Length = 55 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 852 | |||
| KOG1243|consensus | 690 | 100.0 | ||
| KOG2137|consensus | 700 | 100.0 | ||
| KOG0575|consensus | 592 | 100.0 | ||
| KOG0593|consensus | 396 | 100.0 | ||
| KOG0615|consensus | 475 | 100.0 | ||
| KOG0581|consensus | 364 | 100.0 | ||
| KOG0595|consensus | 429 | 100.0 | ||
| KOG0591|consensus | 375 | 100.0 | ||
| KOG0592|consensus | 604 | 100.0 | ||
| KOG0661|consensus | 538 | 100.0 | ||
| KOG0600|consensus | 560 | 100.0 | ||
| KOG0659|consensus | 318 | 100.0 | ||
| KOG0598|consensus | 357 | 100.0 | ||
| KOG0597|consensus | 808 | 100.0 | ||
| KOG0663|consensus | 419 | 100.0 | ||
| KOG0588|consensus | 786 | 100.0 | ||
| KOG0660|consensus | 359 | 100.0 | ||
| KOG0582|consensus | 516 | 100.0 | ||
| KOG0578|consensus | 550 | 100.0 | ||
| KOG0583|consensus | 370 | 100.0 | ||
| KOG0594|consensus | 323 | 100.0 | ||
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0616|consensus | 355 | 100.0 | ||
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0658|consensus | 364 | 100.0 | ||
| KOG0605|consensus | 550 | 100.0 | ||
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0198|consensus | 313 | 100.0 | ||
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0192|consensus | 362 | 100.0 | ||
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| KOG0585|consensus | 576 | 100.0 | ||
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| KOG0611|consensus | 668 | 100.0 | ||
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| KOG0694|consensus | 694 | 100.0 | ||
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0201|consensus | 467 | 100.0 | ||
| KOG0033|consensus | 355 | 100.0 | ||
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0580|consensus | 281 | 100.0 | ||
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0667|consensus | 586 | 100.0 | ||
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| KOG0589|consensus | 426 | 100.0 | ||
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0610|consensus | 459 | 100.0 | ||
| KOG0032|consensus | 382 | 100.0 | ||
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1989|consensus | 738 | 100.0 | ||
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| KOG0197|consensus | 468 | 100.0 | ||
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4721|consensus | 904 | 100.0 | ||
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0599|consensus | 411 | 100.0 | ||
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| KOG4717|consensus | 864 | 100.0 | ||
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| KOG0662|consensus | 292 | 100.0 | ||
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| KOG2345|consensus | 302 | 100.0 | ||
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4236|consensus | 888 | 100.0 | ||
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| KOG0193|consensus | 678 | 100.0 | ||
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.98 | |
| KOG0574|consensus | 502 | 99.98 | ||
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.98 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.98 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.98 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.98 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.98 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.98 | |
| KOG1240|consensus | 1431 | 99.98 | ||
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.98 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.98 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.98 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.98 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.98 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.98 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.98 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.98 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.98 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.98 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.98 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.98 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.98 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.97 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.97 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.97 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.97 | |
| KOG0596|consensus | 677 | 99.97 | ||
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.97 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.97 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.97 | |
| KOG0579|consensus | 1187 | 99.97 | ||
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.97 | |
| KOG0577|consensus | 948 | 99.97 | ||
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.97 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.97 | |
| KOG4279|consensus | 1226 | 99.97 | ||
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.97 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.97 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.97 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.97 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.97 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.97 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.97 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.97 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.97 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.97 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.97 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.97 | |
| KOG0586|consensus | 596 | 99.97 | ||
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.97 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.97 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.97 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.97 | |
| KOG0604|consensus | 400 | 99.97 | ||
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.97 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.97 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.97 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.97 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.97 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.97 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.97 | |
| KOG0666|consensus | 438 | 99.97 | ||
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.97 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.97 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.97 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.97 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.97 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.97 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.97 | |
| KOG0607|consensus | 463 | 99.97 | ||
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.97 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.97 | |
| KOG0584|consensus | 632 | 99.97 | ||
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.97 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.97 | |
| KOG4645|consensus | 1509 | 99.97 | ||
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.97 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.97 | |
| KOG0690|consensus | 516 | 99.97 | ||
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.97 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.97 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.97 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.97 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.97 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.97 | |
| KOG0983|consensus | 391 | 99.97 | ||
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.97 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.97 | |
| KOG0612|consensus | 1317 | 99.97 | ||
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.97 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.97 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.97 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.97 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.97 | |
| KOG1035|consensus | 1351 | 99.97 | ||
| KOG0669|consensus | 376 | 99.97 | ||
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.96 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.96 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.96 | |
| KOG1026|consensus | 774 | 99.96 | ||
| KOG1187|consensus | 361 | 99.96 | ||
| KOG0986|consensus | 591 | 99.96 | ||
| KOG4250|consensus | 732 | 99.96 | ||
| KOG4257|consensus | 974 | 99.96 | ||
| KOG1095|consensus | 1025 | 99.96 | ||
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.96 | |
| KOG0670|consensus | 752 | 99.96 | ||
| KOG0696|consensus | 683 | 99.96 | ||
| KOG0668|consensus | 338 | 99.96 | ||
| KOG0603|consensus | 612 | 99.96 | ||
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.96 | |
| KOG0194|consensus | 474 | 99.96 | ||
| KOG1027|consensus | 903 | 99.96 | ||
| KOG0671|consensus | 415 | 99.96 | ||
| KOG0608|consensus | 1034 | 99.95 | ||
| KOG0614|consensus | 732 | 99.95 | ||
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.95 | |
| KOG4278|consensus | 1157 | 99.95 | ||
| KOG0665|consensus | 369 | 99.95 | ||
| KOG0587|consensus | 953 | 99.95 | ||
| KOG1006|consensus | 361 | 99.95 | ||
| KOG1094|consensus | 807 | 99.95 | ||
| KOG0199|consensus | 1039 | 99.95 | ||
| KOG1290|consensus | 590 | 99.95 | ||
| KOG0196|consensus | 996 | 99.94 | ||
| KOG1151|consensus | 775 | 99.94 | ||
| KOG0695|consensus | 593 | 99.94 | ||
| KOG0664|consensus | 449 | 99.94 | ||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.94 | |
| KOG2052|consensus | 513 | 99.93 | ||
| KOG1152|consensus | 772 | 99.93 | ||
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.93 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.93 | |
| KOG0984|consensus | 282 | 99.92 | ||
| KOG3653|consensus | 534 | 99.92 | ||
| KOG0200|consensus | 609 | 99.92 | ||
| KOG0576|consensus | 829 | 99.92 | ||
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.91 | |
| KOG1025|consensus | 1177 | 99.9 | ||
| KOG1167|consensus | 418 | 99.9 | ||
| KOG1345|consensus | 378 | 99.89 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.89 | |
| KOG1024|consensus | 563 | 99.86 | ||
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.84 | |
| KOG1164|consensus | 322 | 99.81 | ||
| KOG1165|consensus | 449 | 99.81 | ||
| KOG0590|consensus | 601 | 99.8 | ||
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.79 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.79 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.78 | |
| KOG1163|consensus | 341 | 99.78 | ||
| KOG4158|consensus | 598 | 99.75 | ||
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.68 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.68 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.67 | |
| KOG0603|consensus | 612 | 99.63 | ||
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.61 | |
| KOG0195|consensus | 448 | 99.6 | ||
| KOG0606|consensus | 1205 | 99.59 | ||
| KOG1166|consensus | 974 | 99.58 | ||
| smart00090 | 237 | RIO RIO-like kinase. | 99.57 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.56 | |
| KOG1023|consensus | 484 | 99.55 | ||
| KOG1033|consensus | 516 | 99.5 | ||
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.46 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.44 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.41 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.39 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.34 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.33 | |
| KOG1266|consensus | 458 | 99.29 | ||
| KOG0590|consensus | 601 | 99.29 | ||
| KOG0601|consensus | 524 | 99.28 | ||
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.26 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 98.99 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 98.99 | |
| KOG3741|consensus | 655 | 98.94 | ||
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 98.93 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 98.87 | |
| KOG0211|consensus | 759 | 98.87 | ||
| KOG0601|consensus | 524 | 98.81 | ||
| KOG0606|consensus | 1205 | 98.81 | ||
| KOG1243|consensus | 690 | 98.81 | ||
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.67 | |
| KOG0211|consensus | 759 | 98.61 | ||
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.59 | |
| KOG3087|consensus | 229 | 98.55 | ||
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 98.51 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.48 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.41 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.39 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.39 | |
| KOG1240|consensus | 1431 | 98.33 | ||
| PRK09902 | 216 | hypothetical protein; Provisional | 98.23 | |
| PRK09687 | 280 | putative lyase; Provisional | 98.05 | |
| PRK09687 | 280 | putative lyase; Provisional | 98.01 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 97.98 | |
| KOG1235|consensus | 538 | 97.87 | ||
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 97.86 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 97.79 | |
| KOG2137|consensus | 700 | 97.79 | ||
| KOG2171|consensus | 1075 | 97.78 | ||
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 97.74 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 97.69 | |
| KOG2171|consensus | 1075 | 97.66 | ||
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 97.54 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 97.49 | |
| KOG1242|consensus | 569 | 97.46 | ||
| PF12717 | 178 | Cnd1: non-SMC mitotic condensation complex subunit | 97.44 | |
| KOG1241|consensus | 859 | 97.43 | ||
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 97.36 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 97.33 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 97.3 | |
| KOG1242|consensus | 569 | 97.28 | ||
| KOG1035|consensus | 1351 | 97.27 | ||
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 97.22 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 97.19 | |
| KOG2023|consensus | 885 | 97.18 | ||
| KOG2023|consensus | 885 | 97.15 | ||
| KOG0576|consensus | 829 | 97.15 | ||
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 97.12 | |
| PF10707 | 199 | YrbL-PhoP_reg: PhoP regulatory network protein Yrb | 97.05 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 97.03 | |
| KOG2270|consensus | 520 | 97.01 | ||
| PF13646 | 88 | HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I | 96.89 | |
| KOG0166|consensus | 514 | 96.78 | ||
| PTZ00429 | 746 | beta-adaptin; Provisional | 96.66 | |
| KOG2259|consensus | 823 | 96.59 | ||
| KOG0213|consensus | 1172 | 96.59 | ||
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 96.59 | |
| cd05155 | 235 | APH_ChoK_like_1 Uncharacterized bacterial proteins | 96.56 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 96.51 | |
| PLN02876 | 822 | acyl-CoA dehydrogenase | 96.47 | |
| cd05157 | 235 | ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. | 96.46 | |
| KOG1517|consensus | 1387 | 96.37 | ||
| COG5218 | 885 | YCG1 Chromosome condensation complex Condensin, su | 96.3 |
| >KOG1243|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-103 Score=885.66 Aligned_cols=560 Identities=48% Similarity=0.794 Sum_probs=508.7
Q ss_pred ccccccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCc--hHHHHHHHHHHHhCCCCCc
Q psy3914 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADT--YEPALSYVKKLKTLRHPSI 119 (852)
Q Consensus 42 m~~~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~--~~~~~~E~~~Lk~LrHPnI 119 (852)
||+||++++.++|+|+| +... + ..-+.|. .|..+.++.+|+||+++.... .+.++++++.|++||||||
T Consensus 1 ~~~~f~~~~~~~fpY~l-e~~~-----~-~~~a~~~--~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~I 71 (690)
T KOG1243|consen 1 MFSFFSRDSSSQFPYDL-EETA-----F-SSEALWP--DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNI 71 (690)
T ss_pred CcceecccccccCCccc-cccc-----C-CCccccc--ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchh
Confidence 78899999999999999 4443 1 1333333 799999999999999998544 6789999999999999999
Q ss_pred ceEeeeEEcCCCCeEEEEEeecccHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC
Q psy3914 120 LTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG 199 (852)
Q Consensus 120 lk~~d~~e~~~~~~~yIVtE~v~~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g 199 (852)
++|++.++.+ +++|||||.|.||..+|.+ +...+++||++||+.||.|||++|+++|+||+.++|||+..|
T Consensus 72 l~yL~t~e~~--~~~ylvTErV~Pl~~~lk~-------l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~G 142 (690)
T KOG1243|consen 72 LSYLDTTEEE--GTLYLVTERVRPLETVLKE-------LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESG 142 (690)
T ss_pred hhhhhhhccc--CceEEEeeccccHHHHHHH-------hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCC
Confidence 9999999998 8999999999999999943 348899999999999999999999999999999999999999
Q ss_pred cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccCcCCCC
Q psy3914 200 EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNIDNIP 279 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~~~~ip 279 (852)
+|||+||++++....... +........ .|..|+.+.... +..|.|.|||+++++++|...- ...+.+...||
T Consensus 143 eWkLggle~v~~~~~~~~-~~~~~~~~~---s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~~~~--~~~~~~~~~ip 214 (690)
T KOG1243|consen 143 EWKLGGLELVSKASGFNA-PAKSLYLIE---SFDDPEEIDPSE--WSIDSWGLGCLIEELFNGSLLT--KTDLSNTGKIP 214 (690)
T ss_pred cEEEeeeEEEeccccCCc-ccccchhhh---cccChhhcCccc--cchhhhhHHHHHHHHhCcccCc--chhhhccCccc
Confidence 999999999986543222 222222222 577777663322 6789999999999999994433 67788889999
Q ss_pred hhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHHHHHHHHHHhhccCHHHHhHHHHhhhhhhccCCcccccccc
Q psy3914 280 ENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKIDKNKFFNGLASAIDKFPKLISCHKV 359 (852)
Q Consensus 280 ~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv~~l~~Leel~~k~~~eK~~Ff~~L~~~l~~fP~~~~~~ki 359 (852)
+....++++.+...+..||....++..|+.+++||+|.++.++.||+++++|+.+||..||++|.+.++.||++++.+|+
T Consensus 215 k~~~~~~~k~~~~~~~~r~n~~~~~~~~~~~~gff~n~fvd~~~fLeel~lks~~eK~~Ff~~L~~~l~~~pe~i~~~kv 294 (690)
T KOG1243|consen 215 KALIELYCKKLGATELKRPNKLRFILECRLLGGFFRNDFVDTLLFLEELRLKSVEEKQKFFSGLIDRLDNFPEEIIASKV 294 (690)
T ss_pred hhHHHHHHHHhccccccccchhhHHHHHHhccccccchHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhhcCCCcccchhhhhhhcccCChhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHH
Q psy3914 360 LPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQV 439 (852)
Q Consensus 360 LP~Ll~~~e~~~~~~~vL~~llki~~~l~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l 439 (852)
+|.|+.++++|.+++.+|+|+|++++.++.++|+++|+|+|++||.++||+||+.||++++.|+++|++++++++|||++
T Consensus 295 lp~Ll~~~~~g~a~~~~ltpl~k~~k~ld~~eyq~~i~p~l~kLF~~~Dr~iR~~LL~~i~~~i~~Lt~~~~~d~I~phv 374 (690)
T KOG1243|consen 295 LPILLAALEFGDAASDFLTPLFKLGKDLDEEEYQVRIIPVLLKLFKSPDRQIRLLLLQYIEKYIDHLTKQILNDQIFPHV 374 (690)
T ss_pred HHHHHHHhhccccchhhhhHHHHhhhhccccccccchhhhHHHHhcCcchHHHHHHHHhHHHHhhhcCHHhhcchhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHH
Q psy3914 440 ALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFS 519 (852)
Q Consensus 440 ~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~ 519 (852)
..||.|++++|||+|||+|+.||+||+++++|+|+|++|+++|. |++++||||||||||||++++.+..|+++|+.||+
T Consensus 375 ~~G~~DTn~~Lre~Tlksm~~La~kL~~~~Ln~Ellr~~ar~q~-d~~~~irtntticlgki~~~l~~~~R~~vL~~aft 453 (690)
T KOG1243|consen 375 ALGFLDTNATLREQTLKSMAVLAPKLSKRNLNGELLRYLARLQP-DEHGGIRTNTTICLGKIAPHLAASVRKRVLASAFT 453 (690)
T ss_pred HhhcccCCHHHHHHHHHHHHHHHhhhchhhhcHHHHHHHHhhCc-cccCcccccceeeecccccccchhhhccccchhhh
Confidence 99999999999999999999999999999999999999999997 99999999999999999999999999999999999
Q ss_pred hhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhhhccCCCcccccccc
Q psy3914 520 RAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQVSENPSLRESMEAD 599 (852)
Q Consensus 520 r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~~~~~~~~~~~~~~~ 599 (852)
|++||||+|+|.|++.++.+++++|+.+++|++|||.|+|+++|+++.||++|+++|+.|+.++++++ ++++++.
T Consensus 454 ralkdpf~paR~a~v~~l~at~~~~~~~~va~kIlp~l~pl~vd~e~~vr~~a~~~i~~fl~kl~~~~-----~~~~~~g 528 (690)
T KOG1243|consen 454 RALKDPFVPARKAGVLALAATQEYFDQSEVANKILPSLVPLTVDPEKTVRDTAEKAIRQFLEKLEKVS-----PESTEAG 528 (690)
T ss_pred hhhcCCCCCchhhhhHHHhhcccccchhhhhhhccccccccccCcccchhhHHHHHHHHHHhhhhhhc-----ccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999986 5567777
Q ss_pred ccccCCCCCcc-ccchhhhHHhhhccccccccccc
Q psy3914 600 VHTATPSLSNA-AATWADWAVTAVTSKFYRSQSET 633 (852)
Q Consensus 600 ~~~~~~~~~~~-~~~~~gwa~~~~~~k~~~~~~~~ 633 (852)
++.+++..+++ ...|+|||+++++.||+..+..+
T Consensus 529 e~~~s~~~~~~~~~~~a~Wa~t~~s~~f~~~~~~~ 563 (690)
T KOG1243|consen 529 EKAASPVKNHPAEPVWAGWALTSLSAKFKPPQASS 563 (690)
T ss_pred ceeccccccCCccccccccchhhhhccccCCcccc
Confidence 77666555554 45699999999999999944433
|
|
| >KOG2137|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-50 Score=454.89 Aligned_cols=487 Identities=21% Similarity=0.321 Sum_probs=407.4
Q ss_pred CCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 51 SKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 51 ~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
.....|++.+.+|+. ..|.-|.+|.+..+..+.+.-.+..- ...+......+.++|| .
T Consensus 34 ~~~~~~~~~~~~~~~-----g~g~~~~ly~~~~~~sk~~~~~~s~~----~~~ld~~~~~~~~lr~------------~- 91 (700)
T KOG2137|consen 34 KESQSYRSLNQVGSA-----GPGDAWKLYAGKKSGSKAPTLKKSAV----VWMLDKRASSLQQLRG------------L- 91 (700)
T ss_pred ccccccccccceeec-----CCCchhhhhhhhccCccCccccceee----eeecChhhhHHHHHhc------------c-
Confidence 344569999888832 27889999999988776555222111 1112223445566777 1
Q ss_pred CCeEEEEEeecccHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 131 KSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 131 ~~~~yIVtE~v~~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
..+...+|-.. .+ +.+++.||.|+|+++++||++|.|++|+++..|.|||+||+++.
T Consensus 92 -~~vs~aTe~~f--~n--------------------l~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v 148 (700)
T KOG2137|consen 92 -DGVSKATEDGF--AN--------------------LGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCV 148 (700)
T ss_pred -cchhhcccHhh--hh--------------------hhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhh
Confidence 33444454332 11 22344899999999999999999999999999999999999988
Q ss_pred ccccccCCCCccc-----ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhC-CCCCCCC---------------
Q psy3914 211 KISEASCIPMKRY-----SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG-PLQSTNR--------------- 269 (852)
Q Consensus 211 ~~~~~~~~~~~~~-----~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG-~~pf~~~--------------- 269 (852)
........+...+ ........|.|||++.....+.++|+|||||+||.+++| +..+...
T Consensus 149 ~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~ 228 (700)
T KOG2137|consen 149 NANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNA 228 (700)
T ss_pred ccCCCCccccccCCCCCChhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccccc
Confidence 6654333333222 124566799999999878888999999999999999965 3333211
Q ss_pred ccccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHHHHHHHHHHhhccCHHHHhHHHHhhhhhhcc
Q psy3914 270 KSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKIDKNKFFNGLASAIDK 349 (852)
Q Consensus 270 ~~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv~~l~~Leel~~k~~~eK~~Ff~~L~~~l~~ 349 (852)
.......++|.+++..+.++++.++..||++..++.. +||.+..+.+++|||.+..+++.||.+|+++|.+.++.
T Consensus 229 ~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~-----~ff~D~~~~aLrfLD~l~~kdn~qKs~Flk~Ls~~ip~ 303 (700)
T KOG2137|consen 229 GAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSI-----PFFSDPGLKALRFLDDLPQKDNSQKSSFLKGLSKLIPT 303 (700)
T ss_pred ccccccccCcHHHHHHHHHHhcCCcccCcchhhhhcc-----cccCCchhhhhhhcccccccCcHHHHHHHHHHHHhhcc
Confidence 1112236899999999999999999999988777764 99999999999999999999999999999999999999
Q ss_pred CCcccccccchhhhHhhhhcCCCcccchhhhhhhcccCChhhhhcchhhhhhhccccCCH-HHHHHHHHHHHHHHccCCh
Q psy3914 350 FPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDR-ATRSRLLLQLEHFIGHVPD 428 (852)
Q Consensus 350 fP~~~~~~kiLP~Ll~~~e~~~~~~~vL~~llki~~~l~~~ef~~~i~P~i~~LF~~~dr-~iR~~LL~~L~~~~~~l~~ 428 (852)
||.++..+||||.|++++....+.|.+||.++.|++.++..+|..+|+|.|.++|..++. .++++++++|+.+++++++
T Consensus 304 fp~rv~~~kiLP~L~~el~n~~~vp~~LP~v~~i~~~~s~~~~~~~~~p~l~pi~~~~~~~~~~l~i~e~mdlL~~Kt~~ 383 (700)
T KOG2137|consen 304 FPARVLFQKILPTLVAELVNTKMVPIVLPLVLLIAEGLSQNEFGPKMLPALKPIYSASDPKQALLFILENMDLLKEKTPP 383 (700)
T ss_pred CCHHHHHHhhhhHHHHHhccccccccccchhhhhhhccchhhhhhhhhHHHHHHhccCCcccchhhHHhhHHHHHhhCCh
Confidence 999999999999999999999999999999999999999999999999999999997666 5689999999999999999
Q ss_pred HHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChh
Q psy3914 429 AIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ 508 (852)
Q Consensus 429 ~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~ 508 (852)
+++.++|+|+|+.+++|....||+.+|+.++++++.|+...+++.|||.+..++.+.....||+|++.||++++..+++.
T Consensus 384 e~~~~~IlplL~~S~~~~~~~iQ~~~L~~lptv~e~iD~~~vk~~ilP~l~~l~~~tt~~~vkvn~L~c~~~l~q~lD~~ 463 (700)
T KOG2137|consen 384 EEVKEKILPLLYRSLEDSDVQIQELALQILPTVAESIDVPFVKQAILPRLKNLAFKTTNLYVKVNVLPCLAGLIQRLDKA 463 (700)
T ss_pred HHHHHHHHHHHHHHhcCcchhhHHHHHHhhhHHHHhccHHHHHHHHHHHhhcchhcccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hHHHHHHHHHHhh-ccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccCCChhhHH--HHHHHHHHHHHHHhh
Q psy3914 509 IRQKVLISAFSRA-MRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRD--SAFKTIKGFLGKLEQ 585 (852)
Q Consensus 509 ~~~~vLi~af~r~-lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~Vr~--~a~~~i~~~l~~le~ 585 (852)
..-..+.|.+..- .+||.+-.+...++.-.....+.+.+.++.+|||.++++++.+.+++.+ ..++.|+.++++||+
T Consensus 464 ~v~d~~lpi~~~~~~~dp~iv~~~~~i~~~l~~~~~~g~ev~~~~VlPlli~ls~~~~L~~~Qy~~~m~~i~~ml~~ie~ 543 (700)
T KOG2137|consen 464 AVLDELLPILKCIKTRDPAIVMGFLRIYEALALIIYSGVEVMAENVLPLLIPLSVAPSLNGEQYNKYMSEIRLMLSAIEK 543 (700)
T ss_pred HhHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHhhcccceeeehhhhhhhhhhhhhcccccHHHHHHHHHHHHHHHhhhhH
Confidence 8777777766554 7899877777777766667777778899999999999999999999987 577899999999998
Q ss_pred hc
Q psy3914 586 VS 587 (852)
Q Consensus 586 ~~ 587 (852)
..
T Consensus 544 ~~ 545 (700)
T KOG2137|consen 544 PR 545 (700)
T ss_pred HH
Confidence 75
|
|
| >KOG0575|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=387.30 Aligned_cols=242 Identities=18% Similarity=0.295 Sum_probs=217.4
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.+|+.++.+| .|+|.++|.+++..+|+.||+|++.+ ....+.+.+|+++.++|+||||++++++||+
T Consensus 18 ~~Y~~g~~LG--------kGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FED 89 (592)
T KOG0575|consen 18 KRYKRGRFLG--------KGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFED 89 (592)
T ss_pred ceeeeeeeec--------cCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeec
Confidence 6799999999 99999999999999999999999988 5677889999999999999999999999999
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. +++|||.|.|. +|..+++ ..+.++|.+++++++||+.||.||| +.+|+|||||..|+|++++-++|||||
T Consensus 90 s--~nVYivLELC~~~sL~el~K----rrk~ltEpEary~l~QIv~GlkYLH-~~~IiHRDLKLGNlfL~~~~~VKIgDF 162 (592)
T KOG0575|consen 90 S--NNVYIVLELCHRGSLMELLK----RRKPLTEPEARYFLRQIVEGLKYLH-SLGIIHRDLKLGNLFLNENMNVKIGDF 162 (592)
T ss_pred C--CceEEEEEecCCccHHHHHH----hcCCCCcHHHHHHHHHHHHHHHHHH-hcCceecccchhheeecCcCcEEeccc
Confidence 8 99999999999 6887774 3378999999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCC-----------ccccCc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNR-----------KSLSNI 275 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~-----------~~l~~~ 275 (852)
|+++.+..+ ..+-.+++|||.|.|||++.+..+++.+||||+||++|.|+.|++||... .....+
T Consensus 163 GLAt~le~~----~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P 238 (592)
T KOG0575|consen 163 GLATQLEYD----GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMP 238 (592)
T ss_pred ceeeeecCc----ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccc
Confidence 999865432 23334789999999999999899999999999999999999999999543 223346
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHH
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLI 319 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv 319 (852)
..++...+++|.+||++||.+|||++++|.| +||.+.++
T Consensus 239 ~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h-----~Ff~~g~~ 277 (592)
T KOG0575|consen 239 SHLSAEAKDLIRKLLRPNPSERPSLDEVLDH-----PFFKSGFT 277 (592)
T ss_pred cccCHHHHHHHHHHhcCCcccCCCHHHHhcC-----HhhhCCCc
Confidence 6889999999999999999999999999998 88855443
|
|
| >KOG0593|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-42 Score=357.24 Aligned_cols=242 Identities=18% Similarity=0.297 Sum_probs=209.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|+...++| .|+||.||+++++.||+.||||+|-- ......+.+|+++|++|+|||++.++++|...
T Consensus 3 kYE~LgkvG--------EGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrk- 73 (396)
T KOG0593|consen 3 KYEKLGKVG--------EGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRK- 73 (396)
T ss_pred HHhhhhccc--------cCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhc-
Confidence 478888888 99999999999999999999999965 23456789999999999999999999999977
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+|+|+|||. ++.+.|+ .....++...++.+++|++.|+.|+| +.++|||||||+||||+.+|.+|||||||+
T Consensus 74 -rklhLVFE~~dhTvL~eLe---~~p~G~~~~~vk~~l~Q~l~ai~~cH-k~n~IHRDIKPENILit~~gvvKLCDFGFA 148 (396)
T KOG0593|consen 74 -RKLHLVFEYCDHTVLHELE---RYPNGVPSELVKKYLYQLLKAIHFCH-KNNCIHRDIKPENILITQNGVVKLCDFGFA 148 (396)
T ss_pred -ceeEEEeeecchHHHHHHH---hccCCCCHHHHHHHHHHHHHHhhhhh-hcCeecccCChhheEEecCCcEEeccchhh
Confidence 89999999999 5444453 33467899999999999999999999 999999999999999999999999999999
Q ss_pred hccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccCc-------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI------------- 275 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~~------------- 275 (852)
+.+.. |...+...+.|.+|+|||.+ ....|+.++|||++||++.||++|.+.|.|.++++++
T Consensus 149 R~L~~----pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~pr 224 (396)
T KOG0593|consen 149 RTLSA----PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPR 224 (396)
T ss_pred HhhcC----CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHH
Confidence 96532 44556677888999999998 5588999999999999999999999998777554431
Q ss_pred -----------------------------CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHHH
Q psy3914 276 -----------------------------DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLID 320 (852)
Q Consensus 276 -----------------------------~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv~ 320 (852)
.+++.-+.++++.||..||.+|++.++++.| +||++ +++
T Consensus 225 hq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H-----~yFd~-~~e 292 (396)
T KOG0593|consen 225 HQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH-----PYFDG-FIE 292 (396)
T ss_pred HHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC-----hHHHH-HHH
Confidence 3445568899999999999999999999998 89944 443
|
|
| >KOG0615|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=363.06 Aligned_cols=238 Identities=18% Similarity=0.260 Sum_probs=205.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---------CchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---------DTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---------~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
.|.+.+.+| +|+|+.|-.|..+.||+.||||++++. .....+.+|+++|++|.||||++++++
T Consensus 173 ~yii~~~LG--------sGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~ 244 (475)
T KOG0615|consen 173 YYIISKTLG--------SGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDF 244 (475)
T ss_pred eeEeeeeec--------CCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeee
Confidence 488899999 999999999999999999999999981 122346799999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC---Cc
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC---GE 200 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~---g~ 200 (852)
|+.. .+.||||||+. +|.+.+ -.++.+.+..-+.+++|++.||.||| +.||+||||||+|||++.+ ..
T Consensus 245 f~~~--ds~YmVlE~v~GGeLfd~v----v~nk~l~ed~~K~~f~Qll~avkYLH-~~GI~HRDiKPeNILl~~~~e~~l 317 (475)
T KOG0615|consen 245 FEVP--DSSYMVLEYVEGGELFDKV----VANKYLREDLGKLLFKQLLTAVKYLH-SQGIIHRDIKPENILLSNDAEDCL 317 (475)
T ss_pred eecC--CceEEEEEEecCccHHHHH----HhccccccchhHHHHHHHHHHHHHHH-HcCcccccCCcceEEeccCCcceE
Confidence 9988 89999999999 677776 34477888889999999999999999 9999999999999999877 67
Q ss_pred EEEcccchhhccccccCCCCcccccccCCCcccCCccccCC---CCCcchhHHhHHHHHHHHHhCCCCCCCCcccc----
Q psy3914 201 WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSH---VTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---- 273 (852)
Q Consensus 201 ~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~---~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---- 273 (852)
+||+|||++...++ .....+++||+.|.|||++.+. .+..++|||||||++|-+++|.+||.+.....
T Consensus 318 lKItDFGlAK~~g~-----~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~e 392 (475)
T KOG0615|consen 318 LKITDFGLAKVSGE-----GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKE 392 (475)
T ss_pred EEecccchhhcccc-----ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHH
Confidence 99999999985432 3445678999999999998332 34458899999999999999999995432211
Q ss_pred ------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 274 ------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 274 ------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
....|+.+..++|..||..||++|||++++|+| +||+..
T Consensus 393 QI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h-----pW~~~~ 443 (475)
T KOG0615|consen 393 QILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH-----PWFKDA 443 (475)
T ss_pred HHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC-----hhhhcc
Confidence 135788999999999999999999999999998 999864
|
|
| >KOG0581|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-40 Score=349.25 Aligned_cols=237 Identities=14% Similarity=0.196 Sum_probs=206.6
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
..+....|| .|..|+||++.++.|++.+|+|++.. ......+.+|+++++..+||||+++|+.|..+
T Consensus 80 dle~~~~lG--------~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~-- 149 (364)
T KOG0581|consen 80 DLERLGVLG--------SGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSN-- 149 (364)
T ss_pred Hhhhhhhcc--------cCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeC--
Confidence 345567788 89999999999999999999999954 34566789999999999999999999999987
Q ss_pred C-eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 132 S-LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 132 ~-~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
. .++|+||||. +|..++... +.+++..+..++++|++||.|||+..+||||||||+||||+..|++||||||.
T Consensus 150 ~~~isI~mEYMDgGSLd~~~k~~----g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGV 225 (364)
T KOG0581|consen 150 GEEISICMEYMDGGSLDDILKRV----GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGV 225 (364)
T ss_pred CceEEeehhhcCCCCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccc
Confidence 6 5999999999 799888432 78999999999999999999999769999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-----------------c
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK-----------------S 271 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~-----------------~ 271 (852)
+..+.+. ...+++||..|||||.+.+..|+.++||||||+.|+|+++|++|+.... .
T Consensus 226 S~~lvnS------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~pp 299 (364)
T KOG0581|consen 226 SGILVNS------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPP 299 (364)
T ss_pred cHHhhhh------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCC
Confidence 8865432 3346889999999999999999999999999999999999999985420 1
Q ss_pred ccCcCC-CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 272 LSNIDN-IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 272 l~~~~~-ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
...+.. ++++++.|+..||..||.+|+++.++++| +|+..
T Consensus 300 P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H-----pfi~~ 340 (364)
T KOG0581|consen 300 PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH-----PFIKK 340 (364)
T ss_pred CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC-----HHHhh
Confidence 112233 77789999999999999999999999998 77653
|
|
| >KOG0595|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=350.50 Aligned_cols=233 Identities=20% Similarity=0.338 Sum_probs=204.0
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|.+.++|| .|+|++||+|+++.++..||||.+.+. ...+.+..|+++|+.|+|||||.++|+++++
T Consensus 10 ~~y~~~~~iG--------~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~ 81 (429)
T KOG0595|consen 10 GDYELSREIG--------SGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD 81 (429)
T ss_pred ccceehhhcc--------CcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC
Confidence 4699999999 999999999999999999999999883 3567889999999999999999999999998
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC------CcE
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC------GEW 201 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~------g~~ 201 (852)
+++|+|||||. +|..||++. +.+++..++.++.||+.||+||| +.+||||||||+||+++.. -.+
T Consensus 82 --~~i~lVMEyC~gGDLs~yi~~~----~~l~e~t~r~Fm~QLA~alq~L~-~~~IiHRDLKPQNiLLs~~~~~~~~~~L 154 (429)
T KOG0595|consen 82 --DFIYLVMEYCNGGDLSDYIRRR----GRLPEATARHFMQQLASALQFLH-ENNIIHRDLKPQNILLSTTARNDTSPVL 154 (429)
T ss_pred --CeEEEEEEeCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH-HCCeeeccCCcceEEeccCCCCCCCceE
Confidence 99999999999 899999543 68999999999999999999999 9999999999999999875 358
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-----------
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK----------- 270 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~----------- 270 (852)
||+|||+++... +......++|++.|||||++....|+.++|+||+|+++|+|++|..||....
T Consensus 155 KIADFGfAR~L~-----~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~ 229 (429)
T KOG0595|consen 155 KIADFGFARFLQ-----PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKG 229 (429)
T ss_pred EecccchhhhCC-----chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcc
Confidence 999999998654 3344457899999999999988999999999999999999999999996322
Q ss_pred --cccC-cCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 271 --SLSN-IDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 271 --~l~~-~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.... ...+...+.+++..++..+|..|.++.+++.|
T Consensus 230 ~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~ 268 (429)
T KOG0595|consen 230 NEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDH 268 (429)
T ss_pred ccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhh
Confidence 2211 23445567788999999999999999888776
|
|
| >KOG0591|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-41 Score=344.88 Aligned_cols=240 Identities=17% Similarity=0.216 Sum_probs=203.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEee-eEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLD-SVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d-~~e~ 128 (852)
..|+|.++|| .|+||+||++.+..+|..||.|.+.. ....+.+..|+.+|++|+||||+++++ .+.+
T Consensus 19 ~~y~Il~~IG--------~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~ 90 (375)
T KOG0591|consen 19 ADYQILKKIG--------RGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIE 90 (375)
T ss_pred HHHHHHHHHc--------CCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhc
Confidence 3499999999 99999999999999999999998876 334567889999999999999999998 4443
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHh--cC-CceecccCCCCEEEccCCcEEE
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLIN--DA-DLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~--~~-~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+ ...++||||+|. +|.+.++........+++..++.++.|++.||..+|+ .. -++||||||.|||++.+|.+||
T Consensus 91 ~-~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKL 169 (375)
T KOG0591|consen 91 D-NEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKL 169 (375)
T ss_pred c-chhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceee
Confidence 3 255999999999 8999998777777889999999999999999999994 12 3899999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc--------Cc
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--------NI 275 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--------~~ 275 (852)
||||+++.+... .....+++|||.||+||.+....|+.++|||||||++|||+.-..||.|...+. ..
T Consensus 170 GDfGL~r~l~s~----~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~ 245 (375)
T KOG0591|consen 170 GDFGLGRFLSSK----TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY 245 (375)
T ss_pred ccchhHhHhcch----hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC
Confidence 999999865432 223346899999999999999999999999999999999999999998763322 12
Q ss_pred CCC-----ChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 276 DNI-----PENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 276 ~~i-----p~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
..+ +..+..+|..|+..||..||+...++..
T Consensus 246 ~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~d 281 (375)
T KOG0591|consen 246 PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQD 281 (375)
T ss_pred CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHH
Confidence 234 4679999999999999999985555544
|
|
| >KOG0592|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=357.36 Aligned_cols=247 Identities=15% Similarity=0.248 Sum_probs=217.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhC-CCCCcceEeeeEE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTL-RHPSILTFLDSVE 127 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e 127 (852)
.+|.+|+.+| .|+|.+||+|+.+.++..||||++++ +.....+..|-..|.+| .||+|++++..|+
T Consensus 73 ~DF~Fg~~lG--------eGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQ 144 (604)
T KOG0592|consen 73 NDFKFGKILG--------EGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQ 144 (604)
T ss_pred hhcchhheec--------cccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEee
Confidence 4588999999 99999999999999999999999998 45566778888889999 7999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
++ ..+|+|+||+. +|.++|.+. +.+++...+++..||+.||.||| ++|||||||||+|||++.+|++||.|
T Consensus 145 D~--~sLYFvLe~A~nGdll~~i~K~----Gsfde~caR~YAAeIldAleylH-~~GIIHRDlKPENILLd~dmhikITD 217 (604)
T KOG0592|consen 145 DE--ESLYFVLEYAPNGDLLDLIKKY----GSFDETCARFYAAEILDALEYLH-SNGIIHRDLKPENILLDKDGHIKITD 217 (604)
T ss_pred cc--cceEEEEEecCCCcHHHHHHHh----CcchHHHHHHHHHHHHHHHHHHH-hcCceeccCChhheeEcCCCcEEEee
Confidence 99 99999999999 688888544 78999999999999999999999 99999999999999999999999999
Q ss_pred cchhhccccccCC-------CCcc--cccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----
Q psy3914 206 LEYMEKISEASCI-------PMKR--YSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---- 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~-------~~~~--~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---- 272 (852)
||.+..+...... .... ...++||..|.+||++.....+..+|||+|||+||.|+.|.+||.+.+..
T Consensus 218 FGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFq 297 (604)
T KOG0592|consen 218 FGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQ 297 (604)
T ss_pred ccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHH
Confidence 9999865442111 1111 24589999999999998888999999999999999999999999765443
Q ss_pred -------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHHH
Q psy3914 273 -------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLID 320 (852)
Q Consensus 273 -------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv~ 320 (852)
..+..+|+..++|++++|..+|.+|+++.+|.+| +||.+.-.+
T Consensus 298 kI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H-----pFF~~Vdw~ 347 (604)
T KOG0592|consen 298 KIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH-----PFFEGVDWE 347 (604)
T ss_pred HHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC-----cccccCChh
Confidence 3467899999999999999999999999999998 999876443
|
|
| >KOG0661|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=358.77 Aligned_cols=242 Identities=19% Similarity=0.275 Sum_probs=210.3
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CC-chHHHHHHHHHHHhCC-CCCcceEeeeEEc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--AD-TYEPALSYVKKLKTLR-HPSILTFLDSVES 128 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~-~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~ 128 (852)
..+|.+.+++| .|+||.||+|+.+.+|+.||||.+++ .. ..-.-.||++.|++|. |||||++.+++.+
T Consensus 9 m~RY~~i~klG--------DGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d 80 (538)
T KOG0661|consen 9 MDRYTVIRKLG--------DGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRD 80 (538)
T ss_pred HHHHHHHHHhc--------CCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhc
Confidence 35799999999 99999999999999999999998877 11 1223468999999999 9999999999988
Q ss_pred CCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 129 PSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 129 ~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
.. ..+||||||+. +|+++++.+ +..+++..|..+++||++||+|+| .+|+.|||+||+||+|+....+||+|||
T Consensus 81 ~~-~~L~fVfE~Md~NLYqLmK~R---~r~fse~~irnim~QilqGL~hiH-k~GfFHRDlKPENiLi~~~~~iKiaDFG 155 (538)
T KOG0661|consen 81 ND-RILYFVFEFMDCNLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIH-KHGFFHRDLKPENILISGNDVIKIADFG 155 (538)
T ss_pred cC-ceEeeeHHhhhhhHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHH-hcCcccccCChhheEecccceeEecccc
Confidence 61 39999999999 899999543 578999999999999999999999 9999999999999999988899999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN------------ 274 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~------------ 274 (852)
+++.+ .+..|+.. .+-|..|+|||++ ....|+.++|||++|||++|+++-++.|.|.+.+++
T Consensus 156 LARev--~SkpPYTe---YVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~ 230 (538)
T KOG0661|consen 156 LAREV--RSKPPYTE---YVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPD 230 (538)
T ss_pred ccccc--ccCCCcch---hhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCc
Confidence 99976 34555554 4567799999998 788899999999999999999999888876644332
Q ss_pred -----------------------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 275 -----------------------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 275 -----------------------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
+.+.+.+..++|.+||..||.+|||+.+.++| +||+..
T Consensus 231 ~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~-----pffq~~ 297 (538)
T KOG0661|consen 231 KDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH-----PFFQVG 297 (538)
T ss_pred cccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC-----cccccc
Confidence 23567889999999999999999999999998 999764
|
|
| >KOG0600|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=352.53 Aligned_cols=244 Identities=18% Similarity=0.260 Sum_probs=212.0
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
....|+..++|| +|.|+.||+|++..+|+.||+|.+.. +.....+.+|+++|++|.||||+++.+.+.
T Consensus 115 ~~~~feki~kIG--------eGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt 186 (560)
T KOG0600|consen 115 RADSFEKIEKIG--------EGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVT 186 (560)
T ss_pred chHHHHHHHHhc--------CcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEE
Confidence 444588899999 99999999999999999999999877 445668899999999999999999999987
Q ss_pred cCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 128 SPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
+.-...+|+|+||+. +|..++. ...-.+++.+|+.++.||+.||.||| ..|++|||||.+|||||.+|.+||+||
T Consensus 187 ~~~~~siYlVFeYMdhDL~GLl~---~p~vkft~~qIKc~mkQLl~Gl~~cH-~~gvlHRDIK~SNiLidn~G~LKiaDF 262 (560)
T KOG0600|consen 187 SKLSGSIYLVFEYMDHDLSGLLS---SPGVKFTEPQIKCYMKQLLEGLEYCH-SRGVLHRDIKGSNILIDNNGVLKIADF 262 (560)
T ss_pred ecCCceEEEEEecccchhhhhhc---CCCcccChHHHHHHHHHHHHHHHHHh-hcCeeeccccccceEEcCCCCEEeccc
Confidence 653578999999999 8888884 22357999999999999999999999 999999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC-----------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN----------- 274 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~----------- 274 (852)
|+++.+......+ +...+.|..|+|||++ ....|+.++|+||.|||+.|||+|++.|.|...+.+
T Consensus 263 GLAr~y~~~~~~~---~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP 339 (560)
T KOG0600|consen 263 GLARFYTPSGSAP---YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSP 339 (560)
T ss_pred cceeeccCCCCcc---cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCC
Confidence 9999665433333 4466789999999998 667899999999999999999999999977644432
Q ss_pred -----------------------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 275 -----------------------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 275 -----------------------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
...+|....+|+..||..||.+|.|+.+.|++ .||.
T Consensus 340 ~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s-----eyF~ 404 (560)
T KOG0600|consen 340 TEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS-----EYFT 404 (560)
T ss_pred ChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC-----cccc
Confidence 13567788899999999999999999999986 7773
|
|
| >KOG0659|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=326.86 Aligned_cols=239 Identities=17% Similarity=0.222 Sum_probs=209.6
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|...+++| +|.|+.||+|++..+|+.||||++.. +.....+.+|++.|+.++||||+.++|+|...
T Consensus 3 rY~~~~~lG--------EG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~- 73 (318)
T KOG0659|consen 3 RYEKLEKLG--------EGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHK- 73 (318)
T ss_pred hhhhhhhhc--------CcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCC-
Confidence 588889999 99999999999999999999999987 34456789999999999999999999999988
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+.+.||+||+. +|..+++ .....++...+++++.++++||+||| ...|+||||||.|++|+++|.+||+|||++
T Consensus 74 -~~l~lVfEfm~tdLe~vIk---d~~i~l~pa~iK~y~~m~LkGl~y~H-~~~IlHRDlKPnNLLis~~g~lKiADFGLA 148 (318)
T KOG0659|consen 74 -SNLSLVFEFMPTDLEVVIK---DKNIILSPADIKSYMLMTLKGLAYCH-SKWILHRDLKPNNLLISSDGQLKIADFGLA 148 (318)
T ss_pred -CceEEEEEeccccHHHHhc---ccccccCHHHHHHHHHHHHHHHHHHH-hhhhhcccCCccceEEcCCCcEEeecccch
Confidence 99999999999 8999984 33467899999999999999999999 999999999999999999999999999999
Q ss_pred hccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccCc-------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI------------- 275 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~~------------- 275 (852)
+.+.. +.......+.|..|+|||.+ ....|+..+||||.||++.||+.|.+.|.|.++++++
T Consensus 149 r~f~~----p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~ 224 (318)
T KOG0659|consen 149 RFFGS----PNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPD 224 (318)
T ss_pred hccCC----CCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcc
Confidence 96543 22223334678899999997 7788999999999999999999999888776554431
Q ss_pred --------------------------CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 276 --------------------------DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 276 --------------------------~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
...+.+..+++.+|+..||.+|+++.+.++| +||.+
T Consensus 225 ~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~-----~yf~~ 286 (318)
T KOG0659|consen 225 QWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH-----PYFKS 286 (318)
T ss_pred cCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc-----hhhhc
Confidence 2345678899999999999999999999998 78875
|
|
| >KOG0598|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=339.34 Aligned_cols=246 Identities=18% Similarity=0.273 Sum_probs=212.8
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
....|++.+.|| .|+||+||.++++++++.+|+|++++ .......++|..+|.+++||.|++++-.|
T Consensus 23 ~~~dF~~lkviG--------kG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF 94 (357)
T KOG0598|consen 23 GPDDFEILKVIG--------KGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF 94 (357)
T ss_pred Chhheeeeeeee--------ccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec
Confidence 345689999999 99999999999999999999999998 44567899999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
++. ..+|+|+||+. .|..+|+ .++.+++..++.++..|+.||.||| +.|||||||||+||+++.+|+++|+
T Consensus 95 Qt~--~kLylVld~~~GGeLf~hL~----~eg~F~E~~arfYlaEi~lAL~~LH-~~gIiyRDlKPENILLd~~GHi~Lt 167 (357)
T KOG0598|consen 95 QTE--EKLYLVLDYLNGGELFYHLQ----REGRFSEDRARFYLAEIVLALGYLH-SKGIIYRDLKPENILLDEQGHIKLT 167 (357)
T ss_pred ccC--CeEEEEEeccCCccHHHHHH----hcCCcchhHHHHHHHHHHHHHHHHH-hCCeeeccCCHHHeeecCCCcEEEe
Confidence 988 99999999999 6888884 3478999999999999999999999 9999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----------c
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-----------S 273 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-----------~ 273 (852)
|||+++..-.. ......++||+.|||||++.+..|+.++|.||||+++|||++|.+||.+.+.. .
T Consensus 168 DFgL~k~~~~~----~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~ 243 (357)
T KOG0598|consen 168 DFGLCKEDLKD----GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLP 243 (357)
T ss_pred ccccchhcccC----CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCC
Confidence 99999832221 12233589999999999999999999999999999999999999999765422 1
Q ss_pred CcCC-CChhHHHHHHHhccCCCCCCC----CHHHHHHhhcCCCCCCcchHHHH
Q psy3914 274 NIDN-IPENLKRVYLELISERPNQRP----NPADFIMRNRKPGGYFKNDLIDA 321 (852)
Q Consensus 274 ~~~~-ip~~L~~li~~lL~~nP~~Rp----s~~elL~~l~~~~~fF~n~lv~~ 321 (852)
.+.. ++.+.+++++++|..+|++|. .+.++-.| +||...-.+.
T Consensus 244 ~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~H-----pfF~~inW~~ 291 (357)
T KOG0598|consen 244 LPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRH-----PFFKGINWEK 291 (357)
T ss_pred CCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcC-----cccccCCHHH
Confidence 2233 788999999999999999996 56666555 8887754443
|
|
| >KOG0597|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=354.13 Aligned_cols=233 Identities=19% Similarity=0.323 Sum_probs=210.9
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|-+.+.|| +|++++||+|++|.+.+.||||.+++ +.....+++|+++++.|+||||+.+++.||+.
T Consensus 3 ~yhv~e~iG--------~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~- 73 (808)
T KOG0597|consen 3 QYHVYEMIG--------EGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETS- 73 (808)
T ss_pred chhHHHHhc--------CCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhccc-
Confidence 588889999 99999999999999999999999998 34556799999999999999999999999988
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
.++++|+||+. +|..+|. .++.++++.+..+.+|++.||.||| +.+|+|||+||.||++...|.+||||||++
T Consensus 74 -~~~~vVte~a~g~L~~il~----~d~~lpEe~v~~~a~~LVsaL~yLh-s~rilhrd~kPqniLl~~~~~~KlcdFg~A 147 (808)
T KOG0597|consen 74 -AHLWVVTEYAVGDLFTILE----QDGKLPEEQVRAIAYDLVSALYYLH-SNRILHRDMKPQNILLEKGGTLKLCDFGLA 147 (808)
T ss_pred -ceEEEEehhhhhhHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHH-hcCcccccCCcceeeecCCCceeechhhhh
Confidence 99999999999 7888884 4588999999999999999999999 999999999999999999999999999999
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCC-----------ccccCcCCC
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNR-----------KSLSNIDNI 278 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~-----------~~l~~~~~i 278 (852)
+.+..+ ........|||.|||||++.+..|+..+|+|||||++||++.|++||... +....+..+
T Consensus 148 r~m~~~----t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~ 223 (808)
T KOG0597|consen 148 RAMSTN----TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTA 223 (808)
T ss_pred hhcccC----ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccc
Confidence 965432 22334578999999999999999999999999999999999999999643 334456688
Q ss_pred ChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 279 PENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 279 p~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
+..+..+++.+|..||..|.+..+++.|
T Consensus 224 S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 224 SSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred cHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 8899999999999999999999999998
|
|
| >KOG0663|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=331.85 Aligned_cols=242 Identities=18% Similarity=0.243 Sum_probs=210.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
..|+...+|+ .|+||.||+|+++.|++.||+|.++. +..--...+|+.+|.+++||||+.+-+++...
T Consensus 76 ~efe~lnrI~--------EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~ 147 (419)
T KOG0663|consen 76 EEFEKLNRIE--------EGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS 147 (419)
T ss_pred HHHHHHhhcc--------cCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc
Confidence 3588999999 99999999999999999999999877 33445678999999999999999999999876
Q ss_pred CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 130 SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 130 ~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
+-+.+|||||||+ +|..+|+. ....+...+++.++.|+++||+||| +..|+|||||++|++++..|.+||+|||+
T Consensus 148 ~~d~iy~VMe~~EhDLksl~d~---m~q~F~~~evK~L~~QlL~glk~lH-~~wilHRDLK~SNLLm~~~G~lKiaDFGL 223 (419)
T KOG0663|consen 148 NMDKIYIVMEYVEHDLKSLMET---MKQPFLPGEVKTLMLQLLRGLKHLH-DNWILHRDLKTSNLLLSHKGILKIADFGL 223 (419)
T ss_pred ccceeeeeHHHHHhhHHHHHHh---ccCCCchHHHHHHHHHHHHHHHHHh-hceeEecccchhheeeccCCcEEecccch
Confidence 5578999999999 89999853 2368899999999999999999999 99999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccCc------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI------------ 275 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~~------------ 275 (852)
++.++. |...+...+.|..|+|||.+ ....|+.++||||+|||+.||+.+.+.|.|.+.+.++
T Consensus 224 AR~ygs----p~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte 299 (419)
T KOG0663|consen 224 AREYGS----PLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSE 299 (419)
T ss_pred hhhhcC----CcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCcc
Confidence 996643 45555667889999999998 6778999999999999999999999888766443321
Q ss_pred -------------------------------CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 276 -------------------------------DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 276 -------------------------------~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
..++..-.+++..+|..||.+|.|+.+.|+| +||..
T Consensus 300 ~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h-----~~F~e 366 (419)
T KOG0663|consen 300 AIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH-----EYFRE 366 (419)
T ss_pred ccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc-----ccccc
Confidence 1134667889999999999999999999998 88865
|
|
| >KOG0588|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=352.73 Aligned_cols=233 Identities=15% Similarity=0.226 Sum_probs=210.1
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.+|++|+.+| .|+.|.|-.|++..||+.+|||++.+ +.....+.+|+-+|+-|.||||+.+||++++
T Consensus 12 GpwkLgkTLG--------~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~ 83 (786)
T KOG0588|consen 12 GPWKLGKTLG--------KGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWEN 83 (786)
T ss_pred cceecccccc--------CCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeecc
Confidence 5799999999 99999999999999999999999988 3445678999999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. .++|+|.||+. .|+++|- ..+.+++.+.+.++.||+.|+.||| ..+|+||||||+|+|++..+++||+||
T Consensus 84 ~--~~lylvlEyv~gGELFdylv----~kG~l~e~eaa~ff~QIi~gv~yCH-~~~icHRDLKpENlLLd~~~nIKIADF 156 (786)
T KOG0588|consen 84 K--QHLYLVLEYVPGGELFDYLV----RKGPLPEREAAHFFRQILDGVSYCH-AFNICHRDLKPENLLLDVKNNIKIADF 156 (786)
T ss_pred C--ceEEEEEEecCCchhHHHHH----hhCCCCCHHHHHHHHHHHHHHHHHh-hhcceeccCCchhhhhhcccCEeeecc
Confidence 8 99999999999 5888883 3489999999999999999999999 999999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCC-CCcchhHHhHHHHHHHHHhCCCCCCCC-----------ccccC
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHV-TKCSTDMYGLGILIWEVFNGPLQSTNR-----------KSLSN 274 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-~~~~sDIwSLG~ll~el~tG~~pf~~~-----------~~l~~ 274 (852)
|++.. ..+...+.+.+|+++|++||++.+.. .+.++||||.|+|+|.|++|.+||.+. ...+.
T Consensus 157 GMAsL-----e~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~M 231 (786)
T KOG0588|consen 157 GMASL-----EVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEM 231 (786)
T ss_pred ceeec-----ccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccC
Confidence 99863 34556666789999999999995544 568999999999999999999999643 22345
Q ss_pred cCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 275 IDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 275 ~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
+..||.+.+++|++||..||.+|+|..++++|
T Consensus 232 Ps~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 232 PSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred CCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 78999999999999999999999999999998
|
|
| >KOG0660|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=335.57 Aligned_cols=241 Identities=19% Similarity=0.268 Sum_probs=206.5
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC-
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP- 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~- 129 (852)
.|...+.|| .|.+|.|..|+++.+|+.||||++.. ........+|++.|+.++|+||+.+++++...
T Consensus 23 ~y~~~~~iG--------~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~ 94 (359)
T KOG0660|consen 23 YYVLIEPIG--------RGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPS 94 (359)
T ss_pred eeccccccc--------CcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccc
Confidence 466678999 99999999999999999999998873 44567889999999999999999999998762
Q ss_pred --CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 130 --SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 130 --~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
.-+.+|+|+|+++ +|.+.++ .+..+++..+.+++|||+.||+|+| +++++||||||.|++++.++++||+||
T Consensus 95 ~~~f~DvYiV~elMetDL~~iik----~~~~L~d~H~q~f~YQiLrgLKyiH-SAnViHRDLKPsNll~n~~c~lKI~DF 169 (359)
T KOG0660|consen 95 RDKFNDVYLVFELMETDLHQIIK----SQQDLTDDHAQYFLYQILRGLKYIH-SANVIHRDLKPSNLLLNADCDLKICDF 169 (359)
T ss_pred ccccceeEEehhHHhhHHHHHHH----cCccccHHHHHHHHHHHHHhcchhh-cccccccccchhheeeccCCCEEeccc
Confidence 2357999999999 7888883 2345999999999999999999999 999999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC-----------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN----------- 274 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~----------- 274 (852)
|+++..... .........+.|..|+|||++ ....|+.++||||+|||+.||++|++.|.|.+.+.+
T Consensus 170 GLAR~~~~~--~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP 247 (359)
T KOG0660|consen 170 GLARYLDKF--FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTP 247 (359)
T ss_pred cceeecccc--CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCC
Confidence 999966433 112233456778899999997 778899999999999999999999999877644332
Q ss_pred -------------------------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 275 -------------------------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 275 -------------------------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
+.+..+...+++.+||..||.+|+|+++.|.| |||.
T Consensus 248 ~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h-----PYl~ 314 (359)
T KOG0660|consen 248 SEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH-----PYLA 314 (359)
T ss_pred CHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC-----hhhh
Confidence 24566788999999999999999999999998 6764
|
|
| >KOG0582|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=333.47 Aligned_cols=250 Identities=16% Similarity=0.248 Sum_probs=216.3
Q ss_pred CCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 51 SKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 51 ~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
.....|++.+.|| .|..++||+|+++-+++.||||+++. ......+++|++.|+.++||||++++..|.
T Consensus 23 ~n~~~YeL~e~IG--------~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFv 94 (516)
T KOG0582|consen 23 LNAKDYELQEVIG--------VGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFV 94 (516)
T ss_pred CCccceeEEEEEe--------ccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEE
Confidence 3445699999999 88889999999999999999999998 455788999999999999999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
.+ ..+|+||.|+. ++.+++..... ..++|..|..+++++++||.||| ..|.||||||+.||+|+.+|.+||+|
T Consensus 95 v~--~~LWvVmpfMa~GS~ldIik~~~~--~Gl~E~~Ia~iLre~LkaL~YLH-~~G~IHRdvKAgnILi~~dG~VkLad 169 (516)
T KOG0582|consen 95 VD--SELWVVMPFMAGGSLLDIIKTYYP--DGLEEASIATILREVLKALDYLH-QNGHIHRDVKAGNILIDSDGTVKLAD 169 (516)
T ss_pred ec--ceeEEeehhhcCCcHHHHHHHHcc--ccccHHHHHHHHHHHHHHHHHHH-hcCceecccccccEEEcCCCcEEEcC
Confidence 88 99999999998 78888854432 45999999999999999999999 99999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccc--cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc----------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENS--LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---------- 273 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~--~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---------- 273 (852)
||++..+-+........+..+.||++|||||++ ....|+.++||||||+.++||.+|..||.....++
T Consensus 170 Fgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~p 249 (516)
T KOG0582|consen 170 FGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDP 249 (516)
T ss_pred ceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCC
Confidence 999876544332222233567999999999995 67789999999999999999999999996443221
Q ss_pred -----------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchH
Q psy3914 274 -----------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 274 -----------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~l 318 (852)
.....++.++.++..||..||.+|||+.++++| +||++.-
T Consensus 250 p~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh-----~FFk~~k 300 (516)
T KOG0582|consen 250 PTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH-----AFFKKAK 300 (516)
T ss_pred CCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc-----HHHhhcc
Confidence 234567789999999999999999999999998 8997643
|
|
| >KOG0578|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=350.07 Aligned_cols=237 Identities=20% Similarity=0.257 Sum_probs=215.0
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
..|+..++|| +|..|.||.|+...+++.|+||.++. ....+.+.+|+.+|+.++||||+.+++.|...
T Consensus 273 ~~y~~~~kig--------qgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-- 342 (550)
T KOG0578|consen 273 SKYTDFKKIG--------QGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG-- 342 (550)
T ss_pred hhhcchhhhc--------cccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc--
Confidence 4589999999 99999999999999999999999998 56778999999999999999999999999877
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+.+++||||+. +|.+++.. ..++|.+|..+++.++.||+||| ..||+|||||.+||+++.+|.+||+|||||
T Consensus 343 deLWVVMEym~ggsLTDvVt~-----~~~~E~qIA~Icre~l~aL~fLH-~~gIiHrDIKSDnILL~~~g~vKltDFGFc 416 (550)
T KOG0578|consen 343 DELWVVMEYMEGGSLTDVVTK-----TRMTEGQIAAICREILQGLKFLH-ARGIIHRDIKSDNILLTMDGSVKLTDFGFC 416 (550)
T ss_pred ceeEEEEeecCCCchhhhhhc-----ccccHHHHHHHHHHHHHHHHHHH-hcceeeeccccceeEeccCCcEEEeeeeee
Confidence 88999999999 68888743 45899999999999999999999 999999999999999999999999999999
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCC--------------ccccCc
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNR--------------KSLSNI 275 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~--------------~~l~~~ 275 (852)
..+..... ....++||++|||||++....|+.++||||||++++||+-|++||.+. ..++..
T Consensus 417 aqi~~~~~----KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~ 492 (550)
T KOG0578|consen 417 AQISEEQS----KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNP 492 (550)
T ss_pred eccccccC----ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCc
Confidence 86644222 345789999999999999999999999999999999999999999643 344567
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
.++++.+++|+.+||..|+.+|+++.++|+| +||+
T Consensus 493 ~klS~~~kdFL~~cL~~dv~~RasA~eLL~H-----pFl~ 527 (550)
T KOG0578|consen 493 EKLSPELKDFLDRCLVVDVEQRASAKELLEH-----PFLK 527 (550)
T ss_pred cccCHHHHHHHHHHhhcchhcCCCHHHHhcC-----hhhh
Confidence 8999999999999999999999999999998 8884
|
|
| >KOG0583|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-37 Score=343.23 Aligned_cols=241 Identities=18% Similarity=0.290 Sum_probs=210.0
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-------CchHHHHHHHHHHHhCC-CCCcceEe
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-------DTYEPALSYVKKLKTLR-HPSILTFL 123 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-------~~~~~~~~E~~~Lk~Lr-HPnIlk~~ 123 (852)
...+|.+++.+| .|+|++|+.|.+..+|..||||++++. ...+.+.+|+.+++.++ ||||++++
T Consensus 15 ~~g~y~~~~~lG--------~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ 86 (370)
T KOG0583|consen 15 SIGKYELGRTLG--------SGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLL 86 (370)
T ss_pred ccCceeeeeeec--------CCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEE
Confidence 345699999999 999999999999999999999988772 24567889999999999 99999999
Q ss_pred eeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC-Cc
Q psy3914 124 DSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC-GE 200 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~-g~ 200 (852)
+++... ..+||||||+. +|.+++.+ .+.+.+.+++.++.||+.|+.||| ..||+||||||+||+++.+ ++
T Consensus 87 ev~~t~--~~~~ivmEy~~gGdL~~~i~~----~g~l~E~~ar~~F~Qlisav~y~H-~~gi~HRDLK~ENilld~~~~~ 159 (370)
T KOG0583|consen 87 EVFATP--TKIYIVMEYCSGGDLFDYIVN----KGRLKEDEARKYFRQLISAVAYCH-SRGIVHRDLKPENILLDGNEGN 159 (370)
T ss_pred EEEecC--CeEEEEEEecCCccHHHHHHH----cCCCChHHHHHHHHHHHHHHHHHH-hCCEeeCCCCHHHEEecCCCCC
Confidence 999988 88999999999 57777732 488999999999999999999999 9999999999999999999 99
Q ss_pred EEEcccchhhccccccCCCCcccccccCCCcccCCccccCCC-C-CcchhHHhHHHHHHHHHhCCCCCCCCc--------
Q psy3914 201 WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHV-T-KCSTDMYGLGILIWEVFNGPLQSTNRK-------- 270 (852)
Q Consensus 201 ~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-~-~~~sDIwSLG~ll~el~tG~~pf~~~~-------- 270 (852)
+||+|||++.... .........+||+.|+|||++.+.. | +.++||||+|+++|.|++|..||....
T Consensus 160 ~Kl~DFG~s~~~~----~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki 235 (370)
T KOG0583|consen 160 LKLSDFGLSAISP----GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKI 235 (370)
T ss_pred EEEeccccccccC----CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHH
Confidence 9999999987442 2234455789999999999995544 5 588999999999999999999996532
Q ss_pred ---cccCcCCC-ChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 271 ---SLSNIDNI-PENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 271 ---~l~~~~~i-p~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+..+ ++++..++++||..||..|+++.+++.| +||+.
T Consensus 236 ~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h-----~w~~~ 280 (370)
T KOG0583|consen 236 RKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEH-----PWFQK 280 (370)
T ss_pred hcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhC-----hhhcc
Confidence 22334566 8889999999999999999999999987 89875
|
|
| >KOG0594|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=324.87 Aligned_cols=245 Identities=20% Similarity=0.267 Sum_probs=209.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCC-cceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPS-ILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPn-Ilk~~d~~e~~ 129 (852)
.|+..+++| .|+|++||+|+.+.+|+.||+|++..+ ..-..+.+|+.+|+.|+|+| |+.+++++.++
T Consensus 12 ~~~~~eklG--------eGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~ 83 (323)
T KOG0594|consen 12 DYEKVEKLG--------EGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTS 83 (323)
T ss_pred HHHHHHHhC--------CCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeec
Confidence 478889999 999999999999999999999999872 24457899999999999999 99999999886
Q ss_pred C----CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 130 S----KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 130 ~----~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
+ ...+|+|+||+. +|..++.........++...++.+++||+.||.||| +.+|+||||||+||+|+++|.+||+
T Consensus 84 ~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H-~~~IlHRDLKPQNlLi~~~G~lKla 162 (323)
T KOG0594|consen 84 NNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH-SHGILHRDLKPQNLLISSSGVLKLA 162 (323)
T ss_pred ccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH-hCCeecccCCcceEEECCCCcEeee
Confidence 1 128999999999 899999654332246777899999999999999999 9999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC---------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN--------- 274 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~--------- 274 (852)
|||+++ ....|...+...++|..|+|||++ ....|+..+||||+|||++||++++..|.|....++
T Consensus 163 DFGlAr----a~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lG 238 (323)
T KOG0594|consen 163 DFGLAR----AFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLG 238 (323)
T ss_pred ccchHH----HhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcC
Confidence 999998 444566667778889999999998 445899999999999999999999888865433221
Q ss_pred --------------------------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 275 --------------------------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 275 --------------------------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
..+..+...+++.+||..+|.+|.|+...++| +||...
T Consensus 239 tP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h-----~yf~~~ 308 (323)
T KOG0594|consen 239 TPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH-----PYFSEL 308 (323)
T ss_pred CCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC-----hhhccc
Confidence 12223478899999999999999999999998 888754
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-36 Score=326.70 Aligned_cols=243 Identities=21% Similarity=0.251 Sum_probs=202.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
.+|++.+.|| .|++++||.|+++.+++.|+||++.. ......+.+|+.+++.++||||+++++++.+.
T Consensus 5 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~- 75 (303)
T cd07869 5 DSYEKLEKLG--------EGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTK- 75 (303)
T ss_pred ccceEeeeEE--------ecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecC-
Confidence 4699999999 89999999999999999999999876 22334678899999999999999999999987
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
...|+||||+. +|.+++.+ ..+.+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++
T Consensus 76 -~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH-~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 150 (303)
T cd07869 76 -ETLTLVFEYVHTDLCQYMDK---HPGGLHPENVKLFLFQLLRGLSYIH-QRYILHRDLKPQNLLISDTGELKLADFGLA 150 (303)
T ss_pred -CeEEEEEECCCcCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHEEECCCCCEEECCCCcc
Confidence 89999999998 78777743 2356889999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc---------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--------------- 273 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--------------- 273 (852)
...... ........+++.|+|||++. ...++.++|||||||++|+|++|..||.+.....
T Consensus 151 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 226 (303)
T cd07869 151 RAKSVP----SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNE 226 (303)
T ss_pred eeccCC----CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCCh
Confidence 643211 11222355788999999984 4567889999999999999999999996432110
Q ss_pred --------------------C---------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHH
Q psy3914 274 --------------------N---------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLI 319 (852)
Q Consensus 274 --------------------~---------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv 319 (852)
. ...+++.+.+++.+||..||++|||+.++++| +||++...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h-----~~f~~~~~ 296 (303)
T cd07869 227 DTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH-----EYFSDLPP 296 (303)
T ss_pred hhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC-----cccccCCh
Confidence 0 01234678899999999999999999999998 99987543
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >KOG0616|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=312.84 Aligned_cols=251 Identities=18% Similarity=0.251 Sum_probs=216.2
Q ss_pred cccccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCC
Q psy3914 43 WAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHP 117 (852)
Q Consensus 43 ~~~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHP 117 (852)
|..-...+..-..|++.+.+| .|+||+|+.++.+.+|..+|+|++++ -.+.+...+|-++|+.+.||
T Consensus 33 ~~~~~~~~~~l~dfe~~~tlG--------tGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~P 104 (355)
T KOG0616|consen 33 WANTPQNPYSLQDFERLKTLG--------TGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHP 104 (355)
T ss_pred hcCCCCCCcchhhhhheeeec--------cCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCc
Confidence 333333334455689999999 99999999999999999999999998 23556788999999999999
Q ss_pred CcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE
Q psy3914 118 SILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI 195 (852)
Q Consensus 118 nIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV 195 (852)
.++++...+.+. +++|+||||+. .|..+|++. +++++..++.+..||+.||.||| .++|++|||||+||++
T Consensus 105 Flv~l~~t~~d~--~~lymvmeyv~GGElFS~Lrk~----~rF~e~~arFYAAeivlAleylH-~~~iiYRDLKPENiLl 177 (355)
T KOG0616|consen 105 FLVKLYGTFKDN--SNLYMVMEYVPGGELFSYLRKS----GRFSEPHARFYAAEIVLALEYLH-SLDIIYRDLKPENLLL 177 (355)
T ss_pred eeEEEEEeeccC--CeEEEEEeccCCccHHHHHHhc----CCCCchhHHHHHHHHHHHHHHHH-hcCeeeccCChHHeee
Confidence 999999999998 99999999999 699999543 78999999999999999999999 9999999999999999
Q ss_pred ccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---
Q psy3914 196 NSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--- 272 (852)
Q Consensus 196 ~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--- 272 (852)
+.+|.+||.|||++....+ ..-+++|||.|+|||++....|..++|.|+||++||||+.|.+||.+...+
T Consensus 178 D~~G~iKitDFGFAK~v~~-------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY 250 (355)
T KOG0616|consen 178 DQNGHIKITDFGFAKRVSG-------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIY 250 (355)
T ss_pred ccCCcEEEEeccceEEecC-------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHH
Confidence 9999999999999985432 133689999999999999999999999999999999999999999765443
Q ss_pred --------cCcCCCChhHHHHHHHhccCCCCCCC-----CHHHHHHhhcCCCCCCcchHHH
Q psy3914 273 --------SNIDNIPENLKRVYLELISERPNQRP-----NPADFIMRNRKPGGYFKNDLID 320 (852)
Q Consensus 273 --------~~~~~ip~~L~~li~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n~lv~ 320 (852)
..+..++..++++++++|+.|-.+|. -..++..| +||+..-..
T Consensus 251 ~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H-----~wF~~v~W~ 306 (355)
T KOG0616|consen 251 EKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNH-----PWFKGVDWE 306 (355)
T ss_pred HHHHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccC-----cccccccHH
Confidence 34567788999999999999999993 34556665 899865443
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-36 Score=323.03 Aligned_cols=238 Identities=21% Similarity=0.263 Sum_probs=200.0
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
..|++.+.|| .|++++||+|+++.++..|+||++.. ......+.+|+.+++.++||||+++++++.++
T Consensus 5 ~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~- 75 (288)
T cd07871 5 ETYVKLDKLG--------EGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTE- 75 (288)
T ss_pred ccceEeeEEe--------cCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCC-
Confidence 3599999999 99999999999999999999999875 22345678999999999999999999999987
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
...|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|||++
T Consensus 76 -~~~~lv~e~~~~~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~ 150 (288)
T cd07871 76 -RCLTLVFEYLDSDLKQYLDNC---GNLMSMHNVKIFMFQLLRGLSYCH-KRKILHRDLKPQNLLINEKGELKLADFGLA 150 (288)
T ss_pred -CeEEEEEeCCCcCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCHHHEEECCCCCEEECcCcce
Confidence 89999999999 788777422 245788999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc---------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--------------- 273 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--------------- 273 (852)
...... ........+++.|+|||++. ...++.++|||||||++|+|++|..||.+.....
T Consensus 151 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 226 (288)
T cd07871 151 RAKSVP----TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEE 226 (288)
T ss_pred eeccCC----CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChH
Confidence 643211 11222345788999999984 4668889999999999999999999985432100
Q ss_pred --------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 274 --------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 274 --------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
....++.++.+++++||..||.+|||+.++++| +||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h-----p~f 288 (288)
T cd07871 227 TWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH-----SYF 288 (288)
T ss_pred HhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC-----CCC
Confidence 012457789999999999999999999999998 887
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0658|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=327.97 Aligned_cols=239 Identities=17% Similarity=0.272 Sum_probs=203.9
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
....|+-.+.+| .|+||.||.|...++++.||||..-.+. ..-.+|+++|+.++||||++++.+|.....
T Consensus 22 ~~i~~~~~~liG--------~GsFg~Vyq~~~~e~~~~vAIKKv~~d~--r~knrEl~im~~l~HpNIV~L~~~f~~~~~ 91 (364)
T KOG0658|consen 22 VEISYEAVRLIG--------SGSFGVVYQAKLRETEEEVAIKKVLQDK--RYKNRELQIMRKLDHPNIVRLLYFFSSSTE 91 (364)
T ss_pred eEEEEEeeEEEe--------ecccceEEEEEEcCCCceeEEEEecCCC--CcCcHHHHHHHhcCCcCeeeEEEEEEecCC
Confidence 344588899999 9999999999999999999999876532 244689999999999999999998876533
Q ss_pred C---eEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC-CcEEEccc
Q psy3914 132 S---LVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC-GEWKLGGL 206 (852)
Q Consensus 132 ~---~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~-g~~KL~DF 206 (852)
+ ++.+||||++ +|.++++.....+..++..+++.+.+||.+||.||| ..||+||||||.||+||.+ |.+|||||
T Consensus 92 ~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh-~~~IcHRDIKPqNlLvD~~tg~LKicDF 170 (364)
T KOG0658|consen 92 SDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH-SHGICHRDIKPQNLLVDPDTGVLKICDF 170 (364)
T ss_pred CchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH-hcCcccCCCChheEEEcCCCCeEEeccC
Confidence 3 6779999999 899999766666788999999999999999999999 7999999999999999985 99999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC-----------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN----------- 274 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~----------- 274 (852)
|.++.+..+. +. .+..+|..|+|||.+ ....|++++||||.||++.||+-|++.|.|.+...+
T Consensus 171 GSAK~L~~~e--pn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~P 245 (364)
T KOG0658|consen 171 GSAKVLVKGE--PN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTP 245 (364)
T ss_pred CcceeeccCC--Cc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCC
Confidence 9998653321 11 245677899999998 777899999999999999999999999976533221
Q ss_pred -----------------------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 275 -----------------------------IDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 275 -----------------------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
...+|+++.+++.++|..+|.+|.++.+++.|
T Consensus 246 t~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 246 TREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred CHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 24678999999999999999999999999987
|
|
| >KOG0605|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=333.51 Aligned_cols=252 Identities=16% Similarity=0.204 Sum_probs=213.8
Q ss_pred CCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 51 SKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 51 ~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
..-..|++.+.|| .|+||.||.|+++.||+.+|+|++.+ ..+...++.|-.+|....+|+|++++-.
T Consensus 138 ~~~~DFe~Lk~Ig--------kGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs 209 (550)
T KOG0605|consen 138 LSLDDFELLKVIG--------KGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYS 209 (550)
T ss_pred CCcccchhheeec--------cccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEE
Confidence 3445699999999 99999999999999999999999998 5567788999999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
|++. .++|+||||++ ++..+|. ..+.+++.+++.++.+++.|+..|| +.|+|||||||+|+||+..|++||
T Consensus 210 FQD~--~~LYLiMEylPGGD~mTLL~----~~~~L~e~~arfYiaE~vlAI~~iH-~~gyIHRDIKPdNlLiD~~GHiKL 282 (550)
T KOG0605|consen 210 FQDK--EYLYLIMEYLPGGDMMTLLM----RKDTLTEDWARFYIAETVLAIESIH-QLGYIHRDIKPDNLLIDAKGHIKL 282 (550)
T ss_pred ecCC--CeeEEEEEecCCccHHHHHH----hcCcCchHHHHHHHHHHHHHHHHHH-HcCcccccCChhheeecCCCCEee
Confidence 9988 99999999999 7888773 3478999999999999999999999 999999999999999999999999
Q ss_pred cccchhhcccc----c-----------------cCCC-----Cc-----------------ccccccCCCcccCCccccC
Q psy3914 204 GGLEYMEKISE----A-----------------SCIP-----MK-----------------RYSRYEDQSTYQIPENSLS 240 (852)
Q Consensus 204 ~DFg~a~~~~~----~-----------------~~~~-----~~-----------------~~~~~~gt~~Y~APE~~~~ 240 (852)
+|||++..+.. . ...+ .. ..-..+|||.|+|||++.+
T Consensus 283 SDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~ 362 (550)
T KOG0605|consen 283 SDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG 362 (550)
T ss_pred ccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc
Confidence 99999863221 0 0001 00 0113579999999999999
Q ss_pred CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-------------Cc--CCCChhHHHHHHHhccCCCCCCCC---HHH
Q psy3914 241 HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS-------------NI--DNIPENLKRVYLELISERPNQRPN---PAD 302 (852)
Q Consensus 241 ~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~-------------~~--~~ip~~L~~li~~lL~~nP~~Rps---~~e 302 (852)
..|+..+|.||||||+|||+.|-+||.+..... .+ ..++++..++|.+||. ||..|.- +++
T Consensus 363 kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~E 441 (550)
T KOG0605|consen 363 KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEE 441 (550)
T ss_pred CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHH
Confidence 999999999999999999999999997654322 11 3567889999999999 9999985 778
Q ss_pred HHHhhcCCCCCCcchHHHHHH
Q psy3914 303 FIMRNRKPGGYFKNDLIDALL 323 (852)
Q Consensus 303 lL~~l~~~~~fF~n~lv~~l~ 323 (852)
|..| |||++.-.+.+.
T Consensus 442 IK~H-----PfF~~v~W~~l~ 457 (550)
T KOG0605|consen 442 IKKH-----PFFKGVDWDHLR 457 (550)
T ss_pred HhcC-----CccccCCcchhh
Confidence 8776 999987665553
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=330.19 Aligned_cols=243 Identities=20% Similarity=0.288 Sum_probs=200.8
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|+++.||.|+++.+|..|+||++.. ......+.+|+++++.++||||+++++++....
T Consensus 1 ry~i~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 72 (338)
T cd07859 1 RYKIQEVIG--------KGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPS 72 (338)
T ss_pred CeEEEEEEe--------ecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccC
Confidence 599999999 99999999999999999999999875 223346789999999999999999999886431
Q ss_pred ---CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 131 ---KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 131 ---~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
...+|+||||+. +|.+++. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+||
T Consensus 73 ~~~~~~~~lv~e~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~dlkp~NIll~~~~~~kL~Df 147 (338)
T cd07859 73 RREFKDIYVVFELMESDLHQVIK----ANDDLTPEHHQFFLYQLLRALKYIH-TANVFHRDLKPKNILANADCKLKICDF 147 (338)
T ss_pred CCCCceEEEEEecCCCCHHHHHH----hcccCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHeEECCCCcEEEccC
Confidence 135899999999 7887773 2356899999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccC--CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-----------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS--HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS----------- 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~--~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~----------- 273 (852)
|++......... ........+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.....
T Consensus 148 g~~~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~ 226 (338)
T cd07859 148 GLARVAFNDTPT-AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGT 226 (338)
T ss_pred ccccccccccCc-cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCC
Confidence 998743221111 112234568899999999844 678889999999999999999999985432110
Q ss_pred -------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 -------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 -------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++.+||..+|.+||++.++++| +||++
T Consensus 227 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h-----p~f~~ 295 (338)
T cd07859 227 PSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD-----PYFKG 295 (338)
T ss_pred CCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC-----chhhh
Confidence 123567888999999999999999999999997 88864
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-36 Score=329.64 Aligned_cols=238 Identities=18% Similarity=0.253 Sum_probs=206.4
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
-..|++.+.|| .|+++.||+|+++.+|+.|+||++.. ....+.+.+|+.+|+.++||||+++++++.
T Consensus 17 ~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 88 (329)
T PTZ00263 17 LSDFEMGETLG--------TGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQ 88 (329)
T ss_pred chheEEEEEEE--------ecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 34699999999 99999999999999999999999976 234456889999999999999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
++ +.+|+||||+. +|.+++.+ .+.+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|
T Consensus 89 ~~--~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivH~dlkp~NIll~~~~~~kl~D 161 (329)
T PTZ00263 89 DE--NRVYFLLEFVVGGELFTHLRK----AGRFPNDVAKFYHAELVLAFEYLH-SKDIIYRDLKPENLLLDNKGHVKVTD 161 (329)
T ss_pred cC--CEEEEEEcCCCCChHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecCCCHHHEEECCCCCEEEee
Confidence 88 89999999997 68887743 357889999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccC
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSN 274 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~ 274 (852)
||++....+. .....|++.|+|||++.+..++.++|+|||||++|+|++|..||.+... ...
T Consensus 162 fg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~ 234 (329)
T PTZ00263 162 FGFAKKVPDR-------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKF 234 (329)
T ss_pred ccCceEcCCC-------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCC
Confidence 9998754321 1134688899999999888888999999999999999999999965432 122
Q ss_pred cCCCChhHHHHHHHhccCCCCCCCC-----HHHHHHhhcCCCCCCcch
Q psy3914 275 IDNIPENLKRVYLELISERPNQRPN-----PADFIMRNRKPGGYFKND 317 (852)
Q Consensus 275 ~~~ip~~L~~li~~lL~~nP~~Rps-----~~elL~~l~~~~~fF~n~ 317 (852)
...++..+.+++++||..||.+|++ +.+++.| +||.+.
T Consensus 235 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h-----p~f~~~ 277 (329)
T PTZ00263 235 PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH-----PYFHGA 277 (329)
T ss_pred CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC-----CccCCC
Confidence 3457889999999999999999996 7999997 999763
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-36 Score=329.54 Aligned_cols=230 Identities=18% Similarity=0.281 Sum_probs=198.2
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PI 144 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L 144 (852)
.|++|.||+|+++.+|+.|+||++.. ......+.+|+.+|+.++||||+++++.++.. +.+||||||+. +|
T Consensus 5 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~--~~~~lv~e~~~~~~L 82 (323)
T cd05571 5 KGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTH--DRLCFVMEYANGGEL 82 (323)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcC--CEEEEEEeCCCCCcH
Confidence 89999999999999999999999986 22345677899999999999999999999987 89999999998 68
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccc
Q psy3914 145 FYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYS 224 (852)
Q Consensus 145 ~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~ 224 (852)
..++. ....+++..+..++.||+.||.||| +.||+||||||+||+++.+|.+||+|||++...... .....
T Consensus 83 ~~~l~----~~~~~~~~~~~~~~~qi~~~L~~lH-~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~----~~~~~ 153 (323)
T cd05571 83 FFHLS----RERVFSEDRARFYGAEIVSALGYLH-SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD----GATMK 153 (323)
T ss_pred HHHHH----HcCCCCHHHHHHHHHHHHHHHHHHH-hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC----CCccc
Confidence 77773 2367899999999999999999999 899999999999999999999999999998632111 11122
Q ss_pred cccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-----------cccCcCCCChhHHHHHHHhccCC
Q psy3914 225 RYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK-----------SLSNIDNIPENLKRVYLELISER 293 (852)
Q Consensus 225 ~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~-----------~l~~~~~ip~~L~~li~~lL~~n 293 (852)
...||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ....+..+++.+.+++++||..|
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~d 233 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKD 233 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCC
Confidence 4568999999999988888999999999999999999999996432 12334678899999999999999
Q ss_pred CCCCC-----CHHHHHHhhcCCCCCCcch
Q psy3914 294 PNQRP-----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 294 P~~Rp-----s~~elL~~l~~~~~fF~n~ 317 (852)
|++|| ++.++++| +||.+.
T Consensus 234 P~~R~~~~~~~~~~ll~h-----~~f~~~ 257 (323)
T cd05571 234 PKQRLGGGPEDAKEIMEH-----RFFASI 257 (323)
T ss_pred HHHcCCCCCCCHHHHHcC-----CCcCCC
Confidence 99999 89999997 899774
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0198|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=325.60 Aligned_cols=246 Identities=16% Similarity=0.244 Sum_probs=204.5
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC--CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA--DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
..|..++.+| .|+||+||.+.++.+|..+|||..... ...+.+.+|+++|++|+|||||++++.......
T Consensus 17 ~~~~~~~~lG--------~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~ 88 (313)
T KOG0198|consen 17 SNWSKGKLLG--------RGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSREN 88 (313)
T ss_pred chhhhhcccc--------CccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccC
Confidence 4588899999 899999999999999999999998872 125678999999999999999999997544311
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc-CCcEEEcccch
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS-CGEWKLGGLEY 208 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~-~g~~KL~DFg~ 208 (852)
..++|.|||+. +|.+++.+.. +.+++..++.+..||++||.||| +.|+|||||||+|||++. +|.+||+|||+
T Consensus 89 ~~~~i~mEy~~~GsL~~~~~~~g---~~l~E~~v~~ytr~iL~GL~ylH-s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~ 164 (313)
T KOG0198|consen 89 DEYNIFMEYAPGGSLSDLIKRYG---GKLPEPLVRRYTRQILEGLAYLH-SKGIVHCDIKPANILLDPSNGDVKLADFGL 164 (313)
T ss_pred eeeEeeeeccCCCcHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHH-hCCEeccCcccceEEEeCCCCeEEeccCcc
Confidence 37999999999 7999985431 27999999999999999999999 999999999999999999 79999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCC--------------cccc
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNR--------------KSLS 273 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~--------------~~l~ 273 (852)
+..... ............||+.|||||++.. ......+|||||||++.||+||..||.+. ....
T Consensus 165 a~~~~~-~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ 243 (313)
T KOG0198|consen 165 AKKLES-KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPE 243 (313)
T ss_pred cccccc-ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCC
Confidence 886543 1111222335789999999999963 33445899999999999999999998641 1123
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.+..+|...++++.+|+..+|..|||+.++|+| +|..+.
T Consensus 244 ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h-----pf~~~~ 282 (313)
T KOG0198|consen 244 IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH-----PFLKQN 282 (313)
T ss_pred CCcccCHHHHHHHHHHhhcCcccCcCHHHHhhC-----hhhhcc
Confidence 456788899999999999999999999999998 666554
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-36 Score=325.06 Aligned_cols=235 Identities=19% Similarity=0.234 Sum_probs=204.3
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
+|++.+.|| .|+++.||+|.++.+|+.|+||++... ...+.+.+|+.+++.++||||+++++++.+.
T Consensus 2 ~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 73 (291)
T cd05612 2 DLERIKTVG--------TGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQ 73 (291)
T ss_pred Cceeeeeee--------cCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccC
Confidence 589999999 999999999999999999999999761 2345688999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
..+|+||||+. +|.+++.+ .+.+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|||
T Consensus 74 --~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~NIli~~~~~~kl~Dfg 146 (291)
T cd05612 74 --RFLYMLMEYVPGGELFSYLRN----SGRFSNSTGLFYASEIVCALEYLH-SKEIVYRDLKPENILLDKEGHIKLTDFG 146 (291)
T ss_pred --CeEEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecCCCHHHeEECCCCCEEEEecC
Confidence 89999999997 68888843 357889999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcC
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNID 276 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~ 276 (852)
++...... .....|++.|+|||++.+..++.++|||||||++|+|++|..||.+... .....
T Consensus 147 ~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 219 (291)
T cd05612 147 FAKKLRDR-------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR 219 (291)
T ss_pred cchhccCC-------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc
Confidence 98754321 1134688899999999888889999999999999999999999965432 22345
Q ss_pred CCChhHHHHHHHhccCCCCCCCC-----HHHHHHhhcCCCCCCcc
Q psy3914 277 NIPENLKRVYLELISERPNQRPN-----PADFIMRNRKPGGYFKN 316 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps-----~~elL~~l~~~~~fF~n 316 (852)
.++..+.+++++||..||.+|++ +.++++| +||..
T Consensus 220 ~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h-----~~~~~ 259 (291)
T cd05612 220 HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH-----RWFKS 259 (291)
T ss_pred cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC-----ccccC
Confidence 67889999999999999999995 9999987 89865
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-36 Score=321.83 Aligned_cols=238 Identities=20% Similarity=0.286 Sum_probs=200.8
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|++++||+|+++.+++.|+||++.. ......+.+|+.+++.++||||++++++++.+
T Consensus 2 ~y~~~~~lg--------~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 72 (287)
T cd07848 2 KFEVLGVVG--------EGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRR- 72 (287)
T ss_pred CceEEEEec--------ccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecC-
Confidence 599999999 89999999999999999999999976 23456788999999999999999999999987
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+|+||||+. .+...+.. ....+++..+..++.||+.||.||| ..+++||||||+||+++.+|.+||+|||++
T Consensus 73 -~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH-~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~ 147 (287)
T cd07848 73 -GKLYLVFEYVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCH-KNDIVHRDIKPENLLISHNDVLKLCDFGFA 147 (287)
T ss_pred -CEEEEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHEEEcCCCcEEEeeccCc
Confidence 89999999998 44444422 2356899999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc----------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---------------- 273 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---------------- 273 (852)
........ .......|++.|+|||++.+..++.++|+|||||++|+|++|..||.+.....
T Consensus 148 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 224 (287)
T cd07848 148 RNLSEGSN---ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQ 224 (287)
T ss_pred cccccccc---ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHH
Confidence 75432111 11223467889999999977778899999999999999999999996432110
Q ss_pred ---------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 274 ---------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 274 ---------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
....++..+.+++++||..||++|||+.++++| +||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h-----p~f 287 (287)
T cd07848 225 MKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH-----PAF 287 (287)
T ss_pred HHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC-----CCC
Confidence 012367789999999999999999999999998 887
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG0192|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=328.76 Aligned_cols=233 Identities=17% Similarity=0.275 Sum_probs=199.2
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeE-EEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEK-VTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~-VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
..+.+.+| .|+||+||+|..+ |+. |+||++.. ......+.+|+.+|.+|+||||+++++++...
T Consensus 43 l~~~~~iG--------~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~- 111 (362)
T KOG0192|consen 43 LPIEEVLG--------SGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP- 111 (362)
T ss_pred hhhhhhcc--------cCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-
Confidence 45567788 9999999999995 555 99999987 11256899999999999999999999999876
Q ss_pred CC-eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC-ceecccCCCCEEEccCC-cEEEcc
Q psy3914 131 KS-LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDAD-LRHNHVNHTSIFINSCG-EWKLGG 205 (852)
Q Consensus 131 ~~-~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~-ivH~DIkp~NIlV~~~g-~~KL~D 205 (852)
. .++|||||+. +|..+|.+. ....++...+..++.||+.|+.||| +.+ ||||||||+||||+.++ .+||+|
T Consensus 112 -~~~~~iVtEy~~~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH-~~~~iIHrDLK~~NiLv~~~~~~~KI~D 187 (362)
T KOG0192|consen 112 -PGSLCIVTEYMPGGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLH-SEGPIIHRDLKSDNILVDLKGKTLKIAD 187 (362)
T ss_pred -CCceEEEEEeCCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHh-cCCCeeecccChhhEEEcCCCCEEEECC
Confidence 5 7999999999 799999543 4578999999999999999999999 888 99999999999999998 999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCcccc--CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc------------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL--SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS------------ 271 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~--~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------------ 271 (852)
||+++...... .......||+.|||||++. +..|+.++||||||+++|||++|..||.+...
T Consensus 188 FGlsr~~~~~~----~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~ 263 (362)
T KOG0192|consen 188 FGLSREKVISK----TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGL 263 (362)
T ss_pred Cccceeecccc----ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC
Confidence 99997443211 2222367899999999997 67999999999999999999999999965432
Q ss_pred -ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
...+..+|+.+..++.+||+.||..||++.+++..+
T Consensus 264 Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l 300 (362)
T KOG0192|consen 264 RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRL 300 (362)
T ss_pred CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHH
Confidence 123456899999999999999999999999998864
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=325.74 Aligned_cols=236 Identities=17% Similarity=0.199 Sum_probs=205.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.|| .|++|.||+|+++.+++.|+||++.. ......+.+|+.+++.++||||++++++++..
T Consensus 2 ~y~~~~~ig--------~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~ 73 (333)
T cd05600 2 DFQILTQVG--------QGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDD 73 (333)
T ss_pred CcEEEEEEe--------ecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcC
Confidence 599999999 99999999999999999999999986 23445678899999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
.++||||||+. +|.+++.. .+.+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||
T Consensus 74 --~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH-~~~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 74 --EYLYLAMEYVPGGDFRTLLNN----LGVLSEDHARFYMAEMFEAVDALH-ELGYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred --CEEEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCHHHEEECCCCCEEEEeCc
Confidence 89999999997 79888842 357889999999999999999999 9999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-------------cC
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------------SN 274 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------------~~ 274 (852)
++..... ......||+.|+|||++.+..++.++|||||||++|||++|..||.+.... ..
T Consensus 147 ~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 219 (333)
T cd05600 147 LSKGIVT-------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQR 219 (333)
T ss_pred CCccccc-------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccC
Confidence 9874322 222456888999999997778999999999999999999999999643211 11
Q ss_pred c------CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 275 I------DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 275 ~------~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
+ ..++..+.+++.+||..+|.+||++.++++| +||.+.
T Consensus 220 ~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h-----~~~~~~ 263 (333)
T cd05600 220 PVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH-----PFFKEV 263 (333)
T ss_pred CCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC-----cccCCC
Confidence 1 1558899999999999999999999999998 899864
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=336.63 Aligned_cols=240 Identities=18% Similarity=0.225 Sum_probs=205.1
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCC-CeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS-NEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~-g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
..|.+.+.+| .|+++.||.|.+..+ +..|++|.+.. ......+++|+.+|+.++||||+++++.++..
T Consensus 67 ~~y~~~~~lg--------~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~- 137 (478)
T PTZ00267 67 HMYVLTTLVG--------RNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSD- 137 (478)
T ss_pred eeEEEEEEEE--------eCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC-
Confidence 3499999999 899999999999888 78899997755 23345678899999999999999999999988
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
+.+||||||+. +|.++|.........+++.++..++.||+.||.||| +.+|+||||||+||+++.+|.+||+|||+
T Consensus 138 -~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH-~~~ivHrDlkp~NIll~~~~~~kL~DFgl 215 (478)
T PTZ00267 138 -DKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH-SRKMMHRDLKSANIFLMPTGIIKLGDFGF 215 (478)
T ss_pred -CEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-hCCEEECCcCHHhEEECCCCcEEEEeCcC
Confidence 89999999997 799888655555567899999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------cCcC
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------SNID 276 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------~~~~ 276 (852)
+..+..... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... ....
T Consensus 216 a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 293 (478)
T PTZ00267 216 SKQYSDSVS--LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPC 293 (478)
T ss_pred ceecCCccc--cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCc
Confidence 875533211 11223456899999999998888999999999999999999999999654221 1234
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.++..+.+++.+||..+|+.||++.+++.+
T Consensus 294 ~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 294 PVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred cCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 678899999999999999999999999986
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-35 Score=321.60 Aligned_cols=230 Identities=17% Similarity=0.271 Sum_probs=197.0
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PI 144 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L 144 (852)
.|++|.||.+.++.+|..|++|++.. ......+.+|+++++.++||||+++++.+... ..+||||||+. +|
T Consensus 5 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~--~~~~lv~E~~~~~~L 82 (323)
T cd05595 5 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH--DRLCFVMEYANGGEL 82 (323)
T ss_pred eCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecC--CEEEEEEeCCCCCcH
Confidence 89999999999999999999999986 22345667899999999999999999999987 89999999998 68
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccc
Q psy3914 145 FYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYS 224 (852)
Q Consensus 145 ~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~ 224 (852)
..++. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++...... .....
T Consensus 83 ~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~----~~~~~ 153 (323)
T cd05595 83 FFHLS----RERVFTEERARFYGAEIVSALEYLH-SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD----GATMK 153 (323)
T ss_pred HHHHH----HcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC----CCccc
Confidence 77773 2357899999999999999999999 899999999999999999999999999998642111 11122
Q ss_pred cccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcCCCChhHHHHHHHhccCC
Q psy3914 225 RYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNIDNIPENLKRVYLELISER 293 (852)
Q Consensus 225 ~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~~ip~~L~~li~~lL~~n 293 (852)
...|++.|+|||++.+..++.++|+|||||++|+|++|..||.+... ...+..+++.+.+++.+||..|
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~d 233 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKD 233 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCC
Confidence 35688899999999878889999999999999999999999954321 2234678999999999999999
Q ss_pred CCCCC-----CHHHHHHhhcCCCCCCcch
Q psy3914 294 PNQRP-----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 294 P~~Rp-----s~~elL~~l~~~~~fF~n~ 317 (852)
|.+|+ ++.++++| +||.+.
T Consensus 234 P~~R~~~~~~~~~~~l~h-----~~~~~~ 257 (323)
T cd05595 234 PKQRLGGGPSDAKEVMEH-----RFFLSI 257 (323)
T ss_pred HHHhCCCCCCCHHHHHcC-----CCcCCC
Confidence 99998 89999997 899764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG0585|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=320.96 Aligned_cols=242 Identities=17% Similarity=0.219 Sum_probs=200.4
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----------------CCchHHHHHHHHHHHhCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----------------ADTYEPALSYVKKLKTLRH 116 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----------------~~~~~~~~~E~~~Lk~LrH 116 (852)
-..|++++.|| .|.||.|-+|++..+++.||||++++ -...+..++|+.+|++|+|
T Consensus 96 lNqy~l~~eiG--------~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H 167 (576)
T KOG0585|consen 96 LNQYELIKEIG--------SGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHH 167 (576)
T ss_pred hhheehhhhhc--------CCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCC
Confidence 34699999999 99999999999999999999999988 1234688999999999999
Q ss_pred CCcceEeeeEEcCCCCeEEEEEeecccHHHHHHhhhhcCCC-CCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE
Q psy3914 117 PSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNE-KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI 195 (852)
Q Consensus 117 PnIlk~~d~~e~~~~~~~yIVtE~v~~L~~~L~~~~~~~~~-l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV 195 (852)
|||+++++++.+...+.+|||+|||. ...+. ....+.. +++.+++.++..++.||.||| ..|||||||||+|+|+
T Consensus 168 ~nVV~LiEvLDDP~s~~~YlVley~s-~G~v~--w~p~d~~els~~~Ar~ylrDvv~GLEYLH-~QgiiHRDIKPsNLLl 243 (576)
T KOG0585|consen 168 PNVVKLIEVLDDPESDKLYLVLEYCS-KGEVK--WCPPDKPELSEQQARKYLRDVVLGLEYLH-YQGIIHRDIKPSNLLL 243 (576)
T ss_pred cCeeEEEEeecCcccCceEEEEEecc-CCccc--cCCCCcccccHHHHHHHHHHHHHHHHHHH-hcCeeccccchhheEE
Confidence 99999999999876689999999998 22221 2223344 899999999999999999999 9999999999999999
Q ss_pred ccCCcEEEcccchhhccccccC-CCCcccccccCCCcccCCcccc----CCCCCcchhHHhHHHHHHHHHhCCCCCCCCc
Q psy3914 196 NSCGEWKLGGLEYMEKISEASC-IPMKRYSRYEDQSTYQIPENSL----SHVTKCSTDMYGLGILIWEVFNGPLQSTNRK 270 (852)
Q Consensus 196 ~~~g~~KL~DFg~a~~~~~~~~-~~~~~~~~~~gt~~Y~APE~~~----~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~ 270 (852)
+.+|.+||+|||.+..+..... .....+....|||.|+|||... ....+.+.|||+||+.||.|+.|+.||.+..
T Consensus 244 ~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~ 323 (576)
T KOG0585|consen 244 SSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF 323 (576)
T ss_pred cCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch
Confidence 9999999999999875422111 1112233478999999999973 2345678999999999999999999996553
Q ss_pred ccc-----------Cc--CCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 271 SLS-----------NI--DNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 271 ~l~-----------~~--~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.+. .+ ..+...++++|.+||..||..|+++.++..|
T Consensus 324 ~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 324 ELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH 372 (576)
T ss_pred HHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence 322 11 2467789999999999999999999999988
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=320.47 Aligned_cols=237 Identities=15% Similarity=0.226 Sum_probs=199.5
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHH---HhCCCCCcceEeeeEE
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKL---KTLRHPSILTFLDSVE 127 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~L---k~LrHPnIlk~~d~~e 127 (852)
|++.+.|| .|++|.||.|.++.+|+.|+||++.. ....+.+.+|.+++ +.++||||++++++++
T Consensus 1 y~i~~~lg--------~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~ 72 (324)
T cd05589 1 FRCLAVLG--------RGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQ 72 (324)
T ss_pred CeEEEEEe--------ecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEE
Confidence 78899999 99999999999999999999999976 22345566666554 5667999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
+. ..+|+||||+. +|...+. ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|
T Consensus 73 ~~--~~~~lv~E~~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~al~~lH-~~~ivHrdlkp~Nill~~~~~~kL~D 144 (324)
T cd05589 73 TE--DHVCFVMEYAAGGDLMMHIH-----TDVFSEPRAVFYAACVVLGLQYLH-ENKIVYRDLKLDNLLLDTEGFVKIAD 144 (324)
T ss_pred cC--CEEEEEEcCCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeEecCCCHHHeEECCCCcEEeCc
Confidence 87 89999999998 6776663 257899999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccC
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSN 274 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~ 274 (852)
||++..... .........|++.|+|||++.+..++.++|+|||||++|+|++|..||.+... ...
T Consensus 145 fg~~~~~~~----~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~ 220 (324)
T cd05589 145 FGLCKEGMG----FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRY 220 (324)
T ss_pred ccCCccCCC----CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 999763211 11122345688999999999888889999999999999999999999965421 223
Q ss_pred cCCCChhHHHHHHHhccCCCCCCC-----CHHHHHHhhcCCCCCCcch
Q psy3914 275 IDNIPENLKRVYLELISERPNQRP-----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 275 ~~~ip~~L~~li~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n~ 317 (852)
+..+++.+.+++++||..||.+|| ++.++++| +||++.
T Consensus 221 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~-----~~f~~~ 263 (324)
T cd05589 221 PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ-----PFFRDI 263 (324)
T ss_pred CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC-----CCcCCC
Confidence 457899999999999999999999 68888887 899764
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=311.16 Aligned_cols=239 Identities=19% Similarity=0.269 Sum_probs=200.6
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
.|++.+.|| .|+++.||+|+++.++..|+||++.. ......+.+|+.++++++||||+++++.+.++
T Consensus 1 ~y~~~~~l~--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 71 (285)
T cd07861 1 DYTKIEKIG--------EGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQE- 71 (285)
T ss_pred CceEeeEec--------ccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeC-
Confidence 489999999 89999999999999999999999875 22346788999999999999999999999987
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+|+||||+. +|.+++.. ......+++..++.++.||+.||.||| +.+++||||+|+||+++.+|.+||+|||++
T Consensus 72 -~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~qi~~~L~~lH-~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 148 (285)
T cd07861 72 -SRLYLIFEFLSMDLKKYLDS-LPKGQYMDAELVKSYLYQILQGILFCH-SRRVLHRDLKPQNLLIDNKGVIKLADFGLA 148 (285)
T ss_pred -CeEEEEEecCCCCHHHHHhc-CCCCCcCCHHHHHHHHHHHHHHHHHHH-hCCeeecCCCHHHEEEcCCCcEEECcccce
Confidence 89999999998 78888743 233457899999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------- 272 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------- 272 (852)
..... +........+++.|+|||++. ...++.++|+|||||++|+|++|..||.+....
T Consensus 149 ~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (285)
T cd07861 149 RAFGI----PVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTED 224 (285)
T ss_pred eecCC----CcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 64321 111222335677899999874 445688999999999999999999998643210
Q ss_pred ------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 ------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 ------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.....+++++.+++++||..||.+|||+.++++| +||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~-----~~~ 285 (285)
T cd07861 225 VWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH-----PYF 285 (285)
T ss_pred hhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC-----CCC
Confidence 0123578889999999999999999999999997 786
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=316.83 Aligned_cols=240 Identities=20% Similarity=0.251 Sum_probs=200.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
..|.+.+.|| .|+++.||+|+++.++..|+||++.. ......+.+|+.+++.++||||+++++++..+
T Consensus 6 ~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 76 (309)
T cd07872 6 ETYIKLEKLG--------EGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTD- 76 (309)
T ss_pred CceEEEEEec--------ccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeC-
Confidence 4599999999 99999999999999999999999876 22334677899999999999999999999987
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+..|+||||+. +|.+++... ...++...+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++
T Consensus 77 -~~~~lv~e~~~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~lH-~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 151 (309)
T cd07872 77 -KSLTLVFEYLDKDLKQYMDDC---GNIMSMHNVKIFLYQILRGLAYCH-RRKVLHRDLKPQNLLINERGELKLADFGLA 151 (309)
T ss_pred -CeEEEEEeCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHEEECCCCCEEECccccc
Confidence 89999999999 777776432 245788999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------- 272 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------- 272 (852)
...... ........+++.|+|||++ ....++.++|+|||||++|+|++|..||.+....
T Consensus 152 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 227 (309)
T cd07872 152 RAKSVP----TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEE 227 (309)
T ss_pred eecCCC----ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 643221 1112234567899999998 4456788999999999999999999998543210
Q ss_pred -------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 -------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 -------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....++.++.+++.+||..||.+|||+.++++| +||+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h-----~~~~~ 291 (309)
T cd07872 228 TWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH-----AYFRS 291 (309)
T ss_pred HHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC-----hhhhh
Confidence 0113467889999999999999999999999997 77764
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=319.49 Aligned_cols=240 Identities=14% Similarity=0.167 Sum_probs=203.6
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
..+|++.+.|| .|+++.||+++++.+|..|++|++... .....+.+|+++|+.++||||+++++++..+
T Consensus 4 ~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 75 (331)
T cd06649 4 DDDFERISELG--------AGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD 75 (331)
T ss_pred cccceEEEeec--------CCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC
Confidence 45799999999 999999999999999999999998762 2345688999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+.+|+||||+. +|.+++.. ...+++..+..++.||+.||.|||+..+++||||||+||+++.+|.+||+|||
T Consensus 76 --~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg 149 (331)
T cd06649 76 --GEISICMEHMDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFG 149 (331)
T ss_pred --CEEEEEeecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCc
Confidence 89999999998 79888843 25688999999999999999999944579999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------- 272 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------- 272 (852)
++...... ......|++.|+|||++.+..++.++|+|||||++|+|++|..||......
T Consensus 150 ~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 223 (331)
T cd06649 150 VSGQLIDS------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEE 223 (331)
T ss_pred cccccccc------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccccccccc
Confidence 98744221 112346788999999998788899999999999999999999998432100
Q ss_pred --------------------------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 273 --------------------------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 273 --------------------------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
.....+++.+.+++.+||..||++||++.++++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h-- 301 (331)
T cd06649 224 GEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH-- 301 (331)
T ss_pred CCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC--
Confidence 0011367889999999999999999999999998
Q ss_pred CCCCCCcch
Q psy3914 309 KPGGYFKND 317 (852)
Q Consensus 309 ~~~~fF~n~ 317 (852)
+||+..
T Consensus 302 ---~~~~~~ 307 (331)
T cd06649 302 ---TFIKRS 307 (331)
T ss_pred ---hHHhhc
Confidence 787643
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=329.30 Aligned_cols=238 Identities=16% Similarity=0.214 Sum_probs=199.9
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
...+|++.+.|| .|++|.||.|.++.+++.|+||.... ..+.+|+++|+.|+||||+++++++...
T Consensus 90 ~~~~y~~~~~lg--------~G~~g~V~~~~d~~~~~~vaiK~~~~----~~~~~E~~il~~l~HpnIv~~~~~~~~~-- 155 (391)
T PHA03212 90 EKAGFSILETFT--------PGAEGFAFACIDNKTCEHVVIKAGQR----GGTATEAHILRAINHPSIIQLKGTFTYN-- 155 (391)
T ss_pred ccCCcEEEEEEc--------CCCCeEEEEEEECCCCCEEEEechhh----hhhHHHHHHHHhCCCCCCCCEeEEEEEC--
Confidence 345799999999 99999999999999999999997653 3468899999999999999999999987
Q ss_pred CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
...|+|+|++. +|..++.. ...++...+..++.||+.||.||| +.+|+||||||+||+++.+|.+||+|||+++
T Consensus 156 ~~~~lv~e~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~ylH-~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~ 230 (391)
T PHA03212 156 KFTCLILPRYKTDLYCYLAA----KRNIAICDILAIERSVLRAIQYLH-ENRIIHRDIKAENIFINHPGDVCLGDFGAAC 230 (391)
T ss_pred CeeEEEEecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCChHhEEEcCCCCEEEEeCCccc
Confidence 89999999998 77777632 356889999999999999999999 8999999999999999999999999999986
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------------
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------------ 272 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------------ 272 (852)
...+.. ........||+.|+|||++.+..++.++|||||||++|||++|..||.+....
T Consensus 231 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g 307 (391)
T PHA03212 231 FPVDIN---ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSG 307 (391)
T ss_pred cccccc---ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhc
Confidence 432211 11222457899999999998788999999999999999999998765321100
Q ss_pred -----------------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 -----------------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 -----------------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....+|.++.+++++||+.||.+|||+.++++| +||.+
T Consensus 308 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h-----p~f~~ 381 (391)
T PHA03212 308 THPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF-----AAFQD 381 (391)
T ss_pred CChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC-----hhhcc
Confidence 0012356789999999999999999999999997 88865
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-35 Score=318.95 Aligned_cols=230 Identities=18% Similarity=0.258 Sum_probs=196.6
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PI 144 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L 144 (852)
.|++|.||+|+++.+++.|+||++.. ......+.+|+.+|+.++||||+++++.+.+. ..+|+||||+. +|
T Consensus 3 ~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~g~L 80 (312)
T cd05585 3 KGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSP--EKLYLVLAFINGGEL 80 (312)
T ss_pred cCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecC--CeEEEEEcCCCCCcH
Confidence 89999999999999999999999975 23345677899999999999999999999987 89999999998 68
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccc
Q psy3914 145 FYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYS 224 (852)
Q Consensus 145 ~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~ 224 (852)
..++.. .+.+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++....... ....
T Consensus 81 ~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~----~~~~ 151 (312)
T cd05585 81 FHHLQR----EGRFDLSRARFYTAELLCALENLH-KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD----DKTN 151 (312)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC----Cccc
Confidence 888742 357899999999999999999999 8999999999999999999999999999986422111 1122
Q ss_pred cccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-----------cccCcCCCChhHHHHHHHhccCC
Q psy3914 225 RYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK-----------SLSNIDNIPENLKRVYLELISER 293 (852)
Q Consensus 225 ~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~-----------~l~~~~~ip~~L~~li~~lL~~n 293 (852)
...||+.|+|||++.+..++.++|||||||++|+|++|..||.+.. .......+++.+.+++.+||..|
T Consensus 152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 231 (312)
T cd05585 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRD 231 (312)
T ss_pred cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCC
Confidence 4568899999999988888999999999999999999999996432 12234678899999999999999
Q ss_pred CCCCC---CHHHHHHhhcCCCCCCcch
Q psy3914 294 PNQRP---NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 294 P~~Rp---s~~elL~~l~~~~~fF~n~ 317 (852)
|.+|| ++.+++.| +||...
T Consensus 232 p~~R~~~~~~~e~l~h-----p~~~~~ 253 (312)
T cd05585 232 PTRRLGYNGAQEIKNH-----PFFSQL 253 (312)
T ss_pred HHHcCCCCCHHHHHcC-----CCcCCC
Confidence 99997 46888887 899764
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=312.66 Aligned_cols=239 Identities=17% Similarity=0.201 Sum_probs=202.7
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
|++.+.|| .|++|.||+|.++.+|+.|+||++... .....+.+|+++++.++||||+++++++.+.
T Consensus 2 f~~~~~lg--------~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~- 72 (285)
T cd05631 2 FRHYRVLG--------KGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETK- 72 (285)
T ss_pred ceEEEEEe--------cCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC-
Confidence 78889999 999999999999999999999998751 2234577899999999999999999999987
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
+.+|+||||+. +|..++... ....+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||+
T Consensus 73 -~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH-~~~iiH~dikp~Nill~~~~~~kl~Dfg~ 148 (285)
T cd05631 73 -DALCLVLTIMNGGDLKFHIYNM--GNPGFDEQRAIFYAAELCCGLEDLQ-RERIVYRDLKPENILLDDRGHIRISDLGL 148 (285)
T ss_pred -CeEEEEEEecCCCcHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHH-hCCEEeCCCCHHHEEECCCCCEEEeeCCC
Confidence 89999999998 687776322 2346889999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc---------------cc
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS---------------LS 273 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~---------------l~ 273 (852)
+...... .......|+..|+|||++.+..++.++|||||||++|+|++|..||.+... ..
T Consensus 149 ~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 223 (285)
T cd05631 149 AVQIPEG-----ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEE 223 (285)
T ss_pred cEEcCCC-----CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccccc
Confidence 8754221 111234688899999999888889999999999999999999999964321 11
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCC-----HHHHHHhhcCCCCCCcch
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPN-----PADFIMRNRKPGGYFKND 317 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps-----~~elL~~l~~~~~fF~n~ 317 (852)
....++..+.+++++||+.||.+||+ ++++++| +||.+.
T Consensus 224 ~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h-----~~~~~~ 267 (285)
T cd05631 224 YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH-----PIFKNI 267 (285)
T ss_pred CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC-----HhhcCC
Confidence 23468889999999999999999997 8999987 888764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=320.21 Aligned_cols=230 Identities=19% Similarity=0.296 Sum_probs=197.1
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PI 144 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L 144 (852)
.|+++.||.+.++.+|+.|+||++.. ......+.+|+++++.++||||+++++.++.. ..+||||||+. +|
T Consensus 5 ~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~~~lv~Ey~~~g~L 82 (328)
T cd05593 5 KGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTK--DRLCFVMEYVNGGEL 82 (328)
T ss_pred eCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC--CEEEEEEeCCCCCCH
Confidence 89999999999999999999999986 23445678899999999999999999999987 89999999998 68
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccc
Q psy3914 145 FYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYS 224 (852)
Q Consensus 145 ~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~ 224 (852)
..++. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++...... .....
T Consensus 83 ~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH-~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~----~~~~~ 153 (328)
T cd05593 83 FFHLS----RERVFSEDRTRFYGAEIVSALDYLH-SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD----AATMK 153 (328)
T ss_pred HHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH-hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc----ccccc
Confidence 77763 2357899999999999999999999 899999999999999999999999999998642211 11122
Q ss_pred cccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcCCCChhHHHHHHHhccCC
Q psy3914 225 RYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNIDNIPENLKRVYLELISER 293 (852)
Q Consensus 225 ~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~~ip~~L~~li~~lL~~n 293 (852)
...||+.|+|||++.+..++.++|||||||++|+|++|..||.+... ...+..+++.+.+++++||..|
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~d 233 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKD 233 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCC
Confidence 35688999999999877889999999999999999999999964322 1234567899999999999999
Q ss_pred CCCCC-----CHHHHHHhhcCCCCCCcch
Q psy3914 294 PNQRP-----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 294 P~~Rp-----s~~elL~~l~~~~~fF~n~ 317 (852)
|.+|+ ++.++++| +||.+.
T Consensus 234 P~~R~~~~~~~~~~il~h-----~~~~~~ 257 (328)
T cd05593 234 PNKRLGGGPDDAKEIMRH-----SFFTGV 257 (328)
T ss_pred HHHcCCCCCCCHHHHhcC-----CCcCCC
Confidence 99997 89999997 899764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0611|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=317.65 Aligned_cols=237 Identities=15% Similarity=0.221 Sum_probs=208.7
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
-..+|++.+.+| .|.||.|-+|+....|..||||.+.+ +...-.+++|+++|..|+||||++++++|
T Consensus 51 lkHRyE~~etLG--------kGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF 122 (668)
T KOG0611|consen 51 LKHRYEITETLG--------KGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF 122 (668)
T ss_pred hhhHHHHHHHhc--------CCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh
Confidence 345799999999 99999999999999999999999887 44566799999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
+.. +.+.|||||.. .|++|+.. .+.+++.+...++.||+.|+.|+| ..+++|||||.+||+++.++++||+
T Consensus 123 ENk--dKIvivMEYaS~GeLYDYiSe----r~~LsErEaRhfFRQIvSAVhYCH-knrVvHRDLKLENILLD~N~NiKIA 195 (668)
T KOG0611|consen 123 ENK--DKIVIVMEYASGGELYDYISE----RGSLSEREARHFFRQIVSAVHYCH-KNRVVHRDLKLENILLDQNNNIKIA 195 (668)
T ss_pred cCC--ceEEEEEEecCCccHHHHHHH----hccccHHHHHHHHHHHHHHHHHHh-hccceecccchhheeecCCCCeeee
Confidence 987 99999999998 79999943 378999999999999999999999 9999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCC-CcchhHHhHHHHHHHHHhCCCCCCCCccccCc--------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI-------- 275 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~-~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~~-------- 275 (852)
|||++..+.+ ...+..++|++.|.+||++.+..| ++.+|.||||+++|.|..|..||.|.+.....
T Consensus 196 DFGLSNly~~-----~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaY 270 (668)
T KOG0611|consen 196 DFGLSNLYAD-----KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAY 270 (668)
T ss_pred ccchhhhhcc-----ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccc
Confidence 9999864422 345567899999999999966555 56799999999999999999999886543221
Q ss_pred --CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 276 --DNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 276 --~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
..-|....-+|+.||-.||.+|.|+.++..|.+
T Consensus 271 rEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 271 REPETPSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred cCCCCCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 234778899999999999999999999999854
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=312.52 Aligned_cols=239 Identities=19% Similarity=0.236 Sum_probs=194.7
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcC-CCeEEEEEEEeC----CCchHHHHHHHHHHHhC---CCCCcceEeeeE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-SNEKVTIFLNDS----ADTYEPALSYVKKLKTL---RHPSILTFLDSV 126 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~L---rHPnIlk~~d~~ 126 (852)
+|++.+.|| .|++|.||+|++.. ++..|+||++.. ........+|+.+++.+ +||||+++++++
T Consensus 2 ~Y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~ 73 (290)
T cd07862 2 QYECVAEIG--------EGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVC 73 (290)
T ss_pred CcceeeEec--------cCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEE
Confidence 599999999 99999999999854 578899999876 22233556677766665 699999999988
Q ss_pred EcC---CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 127 ESP---SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 127 e~~---~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
... ....+|+||||+. +|.+++... ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+|
T Consensus 74 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH-~~~iiH~dlkp~Nil~~~~~~~k 150 (290)
T cd07862 74 TVSRTDRETKLTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLH-SHRVVHRDLKPQNILVTSSGQIK 150 (290)
T ss_pred ecccCCCCCcEEEEEccCCCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeCCCCHHHEEEcCCCCEE
Confidence 531 2257999999998 788888432 2345889999999999999999999 89999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc---------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--------- 273 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--------- 273 (852)
|+|||++...... .......|++.|+|||++.+..++.++|+|||||++|||++|..||.+.....
T Consensus 151 l~Dfg~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~ 225 (290)
T cd07862 151 LADFGLARIYSFQ-----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 225 (290)
T ss_pred EccccceEeccCC-----cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHh
Confidence 9999998744321 12224567889999999977788899999999999999999999996532210
Q ss_pred -----------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 274 -----------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 274 -----------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
....+++.+.+++.+||+.+|++||++.++++| +||
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h-----p~f 290 (290)
T cd07862 226 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH-----PYF 290 (290)
T ss_pred CCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC-----CCC
Confidence 013467788999999999999999999999997 887
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=323.34 Aligned_cols=239 Identities=18% Similarity=0.205 Sum_probs=205.1
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCC-eEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN-EKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g-~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
....|++.+.|| .|+++.||.|.++.++ ..|+||++.. ......+.+|+.+++.++||||++++++
T Consensus 28 ~~~~y~~~~~ig--------~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~ 99 (340)
T PTZ00426 28 KYEDFNFIRTLG--------TGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGS 99 (340)
T ss_pred ChhhcEEEEEEe--------ecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEE
Confidence 334699999999 9999999999876654 7899999975 2345577899999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+.+. ..+|+||||+. +|.+++.+ ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||
T Consensus 100 ~~~~--~~~~lv~Ey~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDLkp~NILl~~~~~ikL 172 (340)
T PTZ00426 100 FKDE--SYLYLVLEFVIGGEFFTFLRR----NKRFPNDVGCFYAAQIVLIFEYLQ-SLNIVYRDLKPENLLLDKDGFIKM 172 (340)
T ss_pred EEeC--CEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeEccCCCHHHEEECCCCCEEE
Confidence 9987 89999999997 68888742 357899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----------- 272 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----------- 272 (852)
+|||++...... .....||+.|+|||++.+..++.++|+|||||++|||++|..||.+....
T Consensus 173 ~DFG~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~ 245 (340)
T PTZ00426 173 TDFGFAKVVDTR-------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII 245 (340)
T ss_pred ecCCCCeecCCC-------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC
Confidence 999998744221 12356888999999998778889999999999999999999999654321
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCC-----CHHHHHHhhcCCCCCCcch
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRP-----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n~ 317 (852)
..+..+++.+.+++++||+.+|.+|+ ++.++++| +||.+.
T Consensus 246 ~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h-----p~f~~~ 290 (340)
T PTZ00426 246 YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH-----PWFGNI 290 (340)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC-----CCcCCC
Confidence 22456788999999999999999995 89999997 999873
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=324.29 Aligned_cols=242 Identities=13% Similarity=0.163 Sum_probs=203.3
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.|| .|++++||.|+++.+|+.|+||++.. ......+.+|+.+|+.++||||+++++.+++.
T Consensus 2 ~y~~~~~lG--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~ 73 (364)
T cd05599 2 DFESIKVIG--------RGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDE 73 (364)
T ss_pred CceEEEEEE--------ecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC
Confidence 589999999 99999999999999999999999976 23345678899999999999999999999988
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
.++||||||+. +|.+++.. .+.+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||
T Consensus 74 --~~~~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH-~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 74 --NYLYLIMEYLPGGDMMTLLMK----KDTFTEEETRFYIAETILAIDSIH-KLGYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred --CeEEEEECCCCCcHHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeccCCHHHeEECCCCCEEEeecc
Confidence 99999999997 68888742 357899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCC----------------------------------cccccccCCCcccCCccccCCCCCcchhHHhHH
Q psy3914 208 YMEKISEASCIPM----------------------------------KRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLG 253 (852)
Q Consensus 208 ~a~~~~~~~~~~~----------------------------------~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG 253 (852)
++..+........ .......||+.|+|||++.+..++.++||||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 226 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLG 226 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecch
Confidence 9864322110000 001124689999999999888889999999999
Q ss_pred HHHHHHHhCCCCCCCCccc-------------c--CcCCCChhHHHHHHHhccCCCCCCCC---HHHHHHhhcCCCCCCc
Q psy3914 254 ILIWEVFNGPLQSTNRKSL-------------S--NIDNIPENLKRVYLELISERPNQRPN---PADFIMRNRKPGGYFK 315 (852)
Q Consensus 254 ~ll~el~tG~~pf~~~~~l-------------~--~~~~ip~~L~~li~~lL~~nP~~Rps---~~elL~~l~~~~~fF~ 315 (852)
|++|||++|..||.+.... . ....+++.+.++|++|+. +|.+|++ +.+++.| +||+
T Consensus 227 ~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h-----~~~~ 300 (364)
T cd05599 227 VIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH-----PFFK 300 (364)
T ss_pred hHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC-----CCcC
Confidence 9999999999999653211 1 112568899999999996 9999998 9999997 8997
Q ss_pred ch
Q psy3914 316 ND 317 (852)
Q Consensus 316 n~ 317 (852)
+.
T Consensus 301 ~~ 302 (364)
T cd05599 301 GV 302 (364)
T ss_pred CC
Confidence 64
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=334.40 Aligned_cols=243 Identities=17% Similarity=0.241 Sum_probs=199.9
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcC---
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESP--- 129 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~--- 129 (852)
..+|++++.|| .|+||.||+|.++.+++.||||++.... ....+|+.+|+.++||||+++++++...
T Consensus 65 ~~~y~~~~~LG--------~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~ 134 (440)
T PTZ00036 65 NKSYKLGNIIG--------NGSFGVVYEAICIDTSEKVAIKKVLQDP--QYKNRELLIMKNLNHINIIFLKDYYYTECFK 134 (440)
T ss_pred CCeEEEeEEEE--------eCCCEEEEEEEECCCCCEEEEEEEecCc--chHHHHHHHHHhcCCCCCcceeeeEeecccc
Confidence 45699999999 9999999999999999999999886532 3456899999999999999999876432
Q ss_pred ---CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC-cEEEc
Q psy3914 130 ---SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG-EWKLG 204 (852)
Q Consensus 130 ---~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g-~~KL~ 204 (852)
...++|+||||+. +|..++.........+++..++.+++||+.||.||| +.+|+||||||+||+++.++ .+||+
T Consensus 135 ~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH-~~~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 135 KNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH-SKFICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred cCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCEecCCcCHHHEEEcCCCCceeee
Confidence 1135789999999 788877554455678999999999999999999999 99999999999999999765 69999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc----------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---------- 273 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---------- 273 (852)
|||+++.+.... ......||+.|+|||++. ...++.++|||||||++|||++|.+||.+.....
T Consensus 214 DFGla~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~ 288 (440)
T PTZ00036 214 DFGSAKNLLAGQ-----RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLG 288 (440)
T ss_pred ccccchhccCCC-----CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 999987543211 112346788999999984 4568899999999999999999999996542110
Q ss_pred ------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 ------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.+..+|+++.+++.+||..+|.+|||+.+++.| +||.+
T Consensus 289 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h-----p~f~~ 356 (440)
T PTZ00036 289 TPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD-----PFFDD 356 (440)
T ss_pred CCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC-----hhHHh
Confidence 012467889999999999999999999999997 78743
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-35 Score=323.57 Aligned_cols=242 Identities=16% Similarity=0.180 Sum_probs=206.3
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
+|++.+.|| .|++++||+|+++.+|+.|+||++.. ......+.+|+++++.++||||++++++++++
T Consensus 2 ~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 73 (350)
T cd05573 2 DFEVIKVIG--------RGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDE 73 (350)
T ss_pred CceEEEEEE--------eCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecC
Confidence 599999999 99999999999999999999999986 24556788999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+++|+||||+. +|.+++.+ .+.+++..+..++.||+.||.||| ..|++||||||+||+++.+|.+||+|||
T Consensus 74 --~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH-~~giiH~Dlkp~NIll~~~~~~kL~Dfg 146 (350)
T cd05573 74 --EHLYLVMEYMPGGDLMNLLIR----KDVFPEETARFYIAELVLALDSVH-KLGFIHRDIKPDNILIDADGHIKLADFG 146 (350)
T ss_pred --CeEEEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCCHHHeEECCCCCEEeecCC
Confidence 89999999997 78888843 267899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCC-------------------------CCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhC
Q psy3914 208 YMEKISEASCI-------------------------PMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG 262 (852)
Q Consensus 208 ~a~~~~~~~~~-------------------------~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG 262 (852)
++......... .........||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g 226 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYG 226 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccC
Confidence 98754332200 00112235689999999999888899999999999999999999
Q ss_pred CCCCCCCccc---------------cCcCCCChhHHHHHHHhccCCCCCCCC-HHHHHHhhcCCCCCCcch
Q psy3914 263 PLQSTNRKSL---------------SNIDNIPENLKRVYLELISERPNQRPN-PADFIMRNRKPGGYFKND 317 (852)
Q Consensus 263 ~~pf~~~~~l---------------~~~~~ip~~L~~li~~lL~~nP~~Rps-~~elL~~l~~~~~fF~n~ 317 (852)
..||.+.... .....+++.+.++|.+||. +|..|++ +.++++| +||++.
T Consensus 227 ~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h-----p~~~~~ 291 (350)
T cd05573 227 FPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH-----PFFKGI 291 (350)
T ss_pred CCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC-----CCcCCC
Confidence 9999643211 1123468999999999997 9999999 9999997 899763
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >KOG0694|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=328.14 Aligned_cols=249 Identities=15% Similarity=0.223 Sum_probs=214.5
Q ss_pred CCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCC-CCCcceEe
Q psy3914 50 ASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLR-HPSILTFL 123 (852)
Q Consensus 50 p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~Lr-HPnIlk~~ 123 (852)
+.....|.+.+.+| .|+||+|+.+..+.+++.+|||++++ +...+..+.|-+++.... ||.++.++
T Consensus 364 ~~~l~~F~~l~vLG--------kGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~ 435 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLG--------RGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLF 435 (694)
T ss_pred cccccceEEEEEec--------cCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecc
Confidence 44555689999999 99999999999999999999999998 567778888988888775 99999999
Q ss_pred eeEEcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 124 DSVESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
..|++. +++|+||||+. .. ++ .....+.+++..+..+...|+.||.||| ++||||||||.+||+++.+|.+|
T Consensus 436 ~~fQT~--~~l~fvmey~~Ggd--m~--~~~~~~~F~e~rarfyaAev~l~L~fLH-~~~IIYRDlKLdNiLLD~eGh~k 508 (694)
T KOG0694|consen 436 SCFQTK--EHLFFVMEYVAGGD--LM--HHIHTDVFSEPRARFYAAEVVLGLQFLH-ENGIIYRDLKLDNLLLDTEGHVK 508 (694)
T ss_pred cccccC--CeEEEEEEecCCCc--EE--EEEecccccHHHHHHHHHHHHHHHHHHH-hcCceeeecchhheEEcccCcEE
Confidence 999988 99999999998 21 22 2234478999999999999999999999 99999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS----------- 271 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~----------- 271 (852)
|+|||+++. .........+++||+.|+|||++.+..|+.++|.|+||||||||+.|..||.|.+.
T Consensus 509 iADFGlcKe----~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~ 584 (694)
T KOG0694|consen 509 IADFGLCKE----GMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDE 584 (694)
T ss_pred ecccccccc----cCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC
Confidence 999999973 22233455679999999999999999999999999999999999999999986643
Q ss_pred ccCcCCCChhHHHHHHHhccCCCCCCCCH-----HHHHHhhcCCCCCCcchHHHHH
Q psy3914 272 LSNIDNIPENLKRVYLELISERPNQRPNP-----ADFIMRNRKPGGYFKNDLIDAL 322 (852)
Q Consensus 272 l~~~~~ip~~L~~li~~lL~~nP~~Rps~-----~elL~~l~~~~~fF~n~lv~~l 322 (852)
...+..++.+...++++||..||++|.-. .++..| +||++.-.+.+
T Consensus 585 ~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h-----pFFr~i~w~~L 635 (694)
T KOG0694|consen 585 VRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH-----PFFRSIDWDDL 635 (694)
T ss_pred CCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhC-----CccccCCHHHH
Confidence 33456789999999999999999999854 666665 99988655444
|
|
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=310.66 Aligned_cols=242 Identities=20% Similarity=0.239 Sum_probs=201.7
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
-..|++.+.|| .|++|.||.|+++.++..|++|.+.. ......+.+|+.+++.++||||++++++++..
T Consensus 5 ~~~y~~~~~lg--------~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~ 76 (301)
T cd07873 5 LETYIKLDKLG--------EGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE 76 (301)
T ss_pred ccceEEeeEec--------cCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecC
Confidence 34699999999 89999999999999999999999875 23345678899999999999999999999987
Q ss_pred CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 130 SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 130 ~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+|+||||+. +|..++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||+
T Consensus 77 --~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~lH-~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 150 (301)
T cd07873 77 --KSLTLVFEYLDKDLKQYLDD---CGNSINMHNVKLFLFQLLRGLNYCH-RRKVLHRDLKPQNLLINERGELKLADFGL 150 (301)
T ss_pred --CeEEEEEeccccCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCCCHHHEEECCCCcEEECcCcc
Confidence 89999999998 78777743 2346889999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------- 272 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------- 272 (852)
+...... ........+++.|+|||++. ...++.++|+|||||++|+|++|.+||.+....
T Consensus 151 ~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~ 226 (301)
T cd07873 151 ARAKSIP----TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTE 226 (301)
T ss_pred hhccCCC----CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCh
Confidence 8643211 11122334677999999974 455778999999999999999999998543210
Q ss_pred ---------------c-----------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 ---------------S-----------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 ---------------~-----------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
. ....+++.+.++|.+||..||.+|||+.++++| +||...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h-----~~f~~~ 292 (301)
T cd07873 227 ETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH-----PYFHCL 292 (301)
T ss_pred hhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC-----cccccc
Confidence 0 012467889999999999999999999999997 898653
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=319.92 Aligned_cols=231 Identities=18% Similarity=0.277 Sum_probs=196.4
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PI 144 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L 144 (852)
.|++|.||.++++.+|..|+||++.. ......+.+|+++++.++||||+++++.++.. ..+||||||+. +|
T Consensus 5 ~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~--~~~~lv~E~~~~~~L 82 (325)
T cd05594 5 KGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH--DRLCFVMEYANGGEL 82 (325)
T ss_pred eCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcC--CEEEEEEeCCCCCcH
Confidence 89999999999999999999999986 22345667899999999999999999999987 89999999998 68
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccc
Q psy3914 145 FYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYS 224 (852)
Q Consensus 145 ~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~ 224 (852)
..++. ....+++..+..++.||+.||.|||+..+++||||||+||+++.+|.+||+|||++...... .....
T Consensus 83 ~~~l~----~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~----~~~~~ 154 (325)
T cd05594 83 FFHLS----RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD----GATMK 154 (325)
T ss_pred HHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC----Ccccc
Confidence 77763 23578999999999999999999993379999999999999999999999999998642211 11122
Q ss_pred cccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcCCCChhHHHHHHHhccCC
Q psy3914 225 RYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNIDNIPENLKRVYLELISER 293 (852)
Q Consensus 225 ~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~~ip~~L~~li~~lL~~n 293 (852)
...||+.|+|||++.+..++.++|||||||++|+|++|..||.+... ...+..+++.+.+++++||..|
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~d 234 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKD 234 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhcC
Confidence 35688999999999878889999999999999999999999964322 2234578999999999999999
Q ss_pred CCCCC-----CHHHHHHhhcCCCCCCcch
Q psy3914 294 PNQRP-----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 294 P~~Rp-----s~~elL~~l~~~~~fF~n~ 317 (852)
|++|+ ++.++++| +||.+.
T Consensus 235 P~~R~~~~~~~~~~il~h-----~~~~~~ 258 (325)
T cd05594 235 PKQRLGGGPDDAKEIMQH-----KFFAGI 258 (325)
T ss_pred HHHhCCCCCCCHHHHhcC-----CCcCCC
Confidence 99997 89999997 899764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=312.12 Aligned_cols=244 Identities=16% Similarity=0.241 Sum_probs=194.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcC--CCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG--SNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~--~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
.|+ +.+|| .|+||+||+|+++. ++..|+||.+........+.+|+++|+.++||||+++++.+......
T Consensus 3 ~~~-~~~lG--------~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 73 (317)
T cd07868 3 EYE-GCKVG--------RGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADR 73 (317)
T ss_pred ccc-ccccc--------cCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCc
Confidence 344 67888 99999999999764 67899999998755556788999999999999999999998765447
Q ss_pred eEEEEEeecc-cHHHHHHhhh-----hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE----ccCCcEE
Q psy3914 133 LVYLAVEYVE-PIFYHLDNTL-----KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI----NSCGEWK 202 (852)
Q Consensus 133 ~~yIVtE~v~-~L~~~L~~~~-----~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV----~~~g~~K 202 (852)
.+|+|+||+. +|..++.... .....+++..++.++.||+.||.||| +.+++||||||+||++ +..|.+|
T Consensus 74 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH-~~~ivHrDlkp~Nil~~~~~~~~~~~k 152 (317)
T cd07868 74 KVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH-ANWVLHRDLKPANILVMGEGPERGRVK 152 (317)
T ss_pred EEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH-hCCEEcCCCCHHHEEEecCCCCcCcEE
Confidence 8999999998 7887774221 11235889999999999999999999 8999999999999999 4568899
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-c-------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-S------- 273 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-~------- 273 (852)
|+|||+++.+.... .+........+|+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+...- .
T Consensus 153 l~DfG~a~~~~~~~-~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~ 231 (317)
T cd07868 153 IADMGFARLFNSPL-KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH 231 (317)
T ss_pred EeecCceeccCCCC-ccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccH
Confidence 99999987543221 11222334567889999999854 56888999999999999999999998532110 0
Q ss_pred -------------------Cc-------------------------------CCCChhHHHHHHHhccCCCCCCCCHHHH
Q psy3914 274 -------------------NI-------------------------------DNIPENLKRVYLELISERPNQRPNPADF 303 (852)
Q Consensus 274 -------------------~~-------------------------------~~ip~~L~~li~~lL~~nP~~Rps~~el 303 (852)
.. ...+..+.+++++||..||.+|||+.++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~ 311 (317)
T cd07868 232 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 311 (317)
T ss_pred HHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHH
Confidence 00 0123457789999999999999999999
Q ss_pred HHhhcCCCCCC
Q psy3914 304 IMRNRKPGGYF 314 (852)
Q Consensus 304 L~~l~~~~~fF 314 (852)
++| +||
T Consensus 312 l~h-----p~f 317 (317)
T cd07868 312 MQD-----PYF 317 (317)
T ss_pred hcC-----CCC
Confidence 997 887
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >KOG0201|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=319.64 Aligned_cols=235 Identities=16% Similarity=0.268 Sum_probs=207.6
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
...|+..+.|| .|+||.||+|.+..+++.||||+++. +...+.+..|+.+|..++||||.++|+.+..+
T Consensus 12 ~~~~~~~~~Ig--------rGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g 83 (467)
T KOG0201|consen 12 ELLYTKLELIG--------RGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKG 83 (467)
T ss_pred ccccccchhcc--------ccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeec
Confidence 45588889999 99999999999999999999999998 55667899999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
..++|+|||+. ++.+.|+ ....+++.++.+++++++.||.||| ..+.+|||||+.||++..+|.+||+|||
T Consensus 84 --~~LwiiMey~~gGsv~~lL~----~~~~~~E~~i~~ilre~l~~l~ylH-~~~kiHrDIKaanil~s~~g~vkl~Dfg 156 (467)
T KOG0201|consen 84 --TKLWIIMEYCGGGSVLDLLK----SGNILDEFEIAVILREVLKGLDYLH-SEKKIHRDIKAANILLSESGDVKLADFG 156 (467)
T ss_pred --ccHHHHHHHhcCcchhhhhc----cCCCCccceeeeehHHHHHHhhhhh-hcceecccccccceeEeccCcEEEEecc
Confidence 89999999998 6777772 3345589999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccCc------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI------------ 275 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~~------------ 275 (852)
++..+.... .....++||+.|||||++....|+.++||||||++.|||.+|.+|+.....++.+
T Consensus 157 Va~ql~~~~----~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~ 232 (467)
T KOG0201|consen 157 VAGQLTNTV----KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLD 232 (467)
T ss_pred eeeeeechh----hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccc
Confidence 987654322 2225789999999999999889999999999999999999999999655444321
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
...++.+++|+..||+.||+.||++.++|+|
T Consensus 233 ~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 233 GDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 3567789999999999999999999999998
|
|
| >KOG0033|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=301.57 Aligned_cols=241 Identities=16% Similarity=0.247 Sum_probs=209.4
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
+...|++-+.|| .|.|..||++.++.+|+.+++|+++. ....+.+.+|+++.+.|+||||+++.+.+.
T Consensus 9 f~d~y~l~e~ig--------kG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~ 80 (355)
T KOG0033|consen 9 FSDNYDVKEELG--------KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 80 (355)
T ss_pred cchhhhHHHHHc--------cCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhc
Confidence 455699999999 99999999999999999999998876 457789999999999999999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC---CcEE
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC---GEWK 202 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~---g~~K 202 (852)
++ .+.|||+|++. +|..-+-++ ..+++..+..++.||++||.|+| ..+|||||+||+|+++-+. .-+|
T Consensus 81 ~~--~~~ylvFe~m~G~dl~~eIV~R----~~ySEa~aSH~~rQiLeal~yCH-~n~IvHRDvkP~nllLASK~~~A~vK 153 (355)
T KOG0033|consen 81 EE--SFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILEALAYCH-SNGIVHRDLKPENLLLASKAKGAAVK 153 (355)
T ss_pred cc--ceeEEEEecccchHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH-hcCceeccCChhheeeeeccCCCcee
Confidence 88 99999999999 554433222 45788889999999999999999 9999999999999999653 3499
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------- 272 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------- 272 (852)
|+|||++..+.+ ......+.|||.|+|||++.+..|+..+|||+.|+++|-|+.|.+||.+.+.-
T Consensus 154 L~~FGvAi~l~~-----g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~ 228 (355)
T KOG0033|consen 154 LADFGLAIEVND-----GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGA 228 (355)
T ss_pred ecccceEEEeCC-----ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccc
Confidence 999999986542 12223578999999999999999999999999999999999999999763221
Q ss_pred -----cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 -----SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 -----~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....|.++.++++++||..||.+|+|+.+.|+| +|..+.
T Consensus 229 yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H-----pWi~~r 273 (355)
T KOG0033|consen 229 YDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH-----PWICNR 273 (355)
T ss_pred cCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCC-----chhcch
Confidence 2457899999999999999999999999999998 888764
|
|
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=307.96 Aligned_cols=239 Identities=20% Similarity=0.212 Sum_probs=195.6
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhC---CCCCcceEeeeEE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTL---RHPSILTFLDSVE 127 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~L---rHPnIlk~~d~~e 127 (852)
+|++.+.|| .|++|+||+|.++.+|+.|+||.+.. ......+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~y~~~~~lg--------~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~ 72 (288)
T cd07863 1 QYEPVAEIG--------VGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCA 72 (288)
T ss_pred CceEeeEEe--------ecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeec
Confidence 489999999 99999999999999999999999876 12233456677766665 6999999999886
Q ss_pred cC---CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 128 SP---SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 128 ~~---~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
.. ....+|+|+||+. +|..++... ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH-~~~ivH~dikp~Nili~~~~~~kl 149 (288)
T cd07863 73 TSRTDRETKVTLVFEHVDQDLRTYLDKV--PPPGLPAETIKDLMRQFLRGLDFLH-ANCIVHRDLKPENILVTSGGQVKL 149 (288)
T ss_pred cccCCCCceEEEEEcccccCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEECCCCCEEE
Confidence 42 1256899999998 788877432 2245899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----------- 272 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----------- 272 (852)
+|||++....... ......++..|+|||++.+..++.++|||||||++|+|++|.+||.+....
T Consensus 150 ~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~ 224 (288)
T cd07863 150 ADFGLARIYSCQM-----ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 224 (288)
T ss_pred CccCccccccCcc-----cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhC
Confidence 9999987543211 112345678999999997778899999999999999999999988543211
Q ss_pred ---------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 ---------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 ---------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.....++..+.+++.+||..||.+||++.+++.| +||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h-----p~f 288 (288)
T cd07863 225 LPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH-----PFF 288 (288)
T ss_pred CCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC-----CCC
Confidence 0113567788999999999999999999999997 887
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >KOG0580|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-35 Score=294.55 Aligned_cols=234 Identities=18% Similarity=0.242 Sum_probs=209.0
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
..|++|+.+| .|-||.||.|+.+.++-.|++|++.+ ......+++|+.+...|+||||++++++|-+
T Consensus 22 ~dfeigr~Lg--------kgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd 93 (281)
T KOG0580|consen 22 DDFEIGRPLG--------KGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD 93 (281)
T ss_pred hhcccccccc--------CCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec
Confidence 3589999999 89999999999999999999999987 3445678999999999999999999999999
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
+ ..+|+++||.. .|+..|... ....+++.....+++|++.||.|+| .+++|||||||+|++++.+|.+||+||
T Consensus 94 ~--~riyLilEya~~gel~k~L~~~--~~~~f~e~~~a~Yi~q~A~Al~y~h-~k~VIhRdiKpenlLlg~~~~lkiAdf 168 (281)
T KOG0580|consen 94 S--KRIYLILEYAPRGELYKDLQEG--RMKRFDEQRAATYIKQLANALLYCH-LKRVIHRDIKPENLLLGSAGELKIADF 168 (281)
T ss_pred c--ceeEEEEEecCCchHHHHHHhc--ccccccccchhHHHHHHHHHHHHhc-cCCcccCCCCHHHhccCCCCCeeccCC
Confidence 8 89999999998 588888422 3367889999999999999999999 999999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-----------cccCc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK-----------SLSNI 275 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~-----------~l~~~ 275 (852)
|.+.. .+......++||..|.|||++.+..++..+|+|++|++.||++.|.+||.... .+..+
T Consensus 169 GwsV~------~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p 242 (281)
T KOG0580|consen 169 GWSVH------APSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP 242 (281)
T ss_pred Cceee------cCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC
Confidence 99752 23444557899999999999999999999999999999999999999996442 23346
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
..|+....++|.+|+..+|..|....+++.|
T Consensus 243 ~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 243 STISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred cccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 7899999999999999999999999999998
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=320.85 Aligned_cols=235 Identities=11% Similarity=0.153 Sum_probs=195.6
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.|++.+.|| .|++++||+|+++.+++.|+||++... .....+.+|+++++.++||||++++++++..
T Consensus 75 ~~~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 144 (353)
T PLN00034 75 ELERVNRIG--------SGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHN-- 144 (353)
T ss_pred HHhhhhhcc--------CCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccC--
Confidence 488899999 999999999999999999999998752 2345688999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+.+|+||||+. +|... ....+..+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||++
T Consensus 145 ~~~~lv~e~~~~~~L~~~--------~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~~~~kL~DfG~~ 215 (353)
T PLN00034 145 GEIQVLLEFMDGGSLEGT--------HIADEQFLADVARQILSGIAYLH-RRHIVHRDIKPSNLLINSAKNVKIADFGVS 215 (353)
T ss_pred CeEEEEEecCCCCccccc--------ccCCHHHHHHHHHHHHHHHHHHH-HCCEeecCCCHHHEEEcCCCCEEEcccccc
Confidence 89999999998 44332 24567788899999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCcccc-----CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSL-----SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS------------- 271 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-----~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------------- 271 (852)
..+.... .......||..|+|||++. +...+.++|||||||++|||++|..||.....
T Consensus 216 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 291 (353)
T PLN00034 216 RILAQTM----DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMS 291 (353)
T ss_pred eeccccc----ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhcc
Confidence 7543211 1122356888999999872 23345689999999999999999999952211
Q ss_pred --ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 272 --LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 272 --l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
......++..+.++|.+||..||.+||++.++++| +||...
T Consensus 292 ~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h-----p~~~~~ 334 (353)
T PLN00034 292 QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH-----PFILRA 334 (353)
T ss_pred CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC-----cccccC
Confidence 11235678899999999999999999999999998 888654
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-34 Score=318.78 Aligned_cols=237 Identities=15% Similarity=0.181 Sum_probs=197.2
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|++|.||+|.++.+|..|+||++.. ......+.+|+.+++.++||||+++++++...
T Consensus 21 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 92 (359)
T cd07876 21 KRYQQLKPIG--------SGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQ 92 (359)
T ss_pred hceEEEEEee--------cCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccC
Confidence 4699999999 99999999999999999999999875 23345677999999999999999999998754
Q ss_pred C----CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 130 S----KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 130 ~----~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
. ...+|+||||+. +|...+. ..+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+
T Consensus 93 ~~~~~~~~~~lv~e~~~~~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH-~~~ivHrDlkp~NIl~~~~~~~kl~ 165 (359)
T cd07876 93 KSLEEFQDVYLVMELMDANLCQVIH------MELDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSDCTLKIL 165 (359)
T ss_pred CCccccceeEEEEeCCCcCHHHHHh------ccCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCHHHEEECCCCCEEEe
Confidence 1 135899999999 6766652 35788899999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-----------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS----------- 273 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~----------- 273 (852)
|||++...... .......+|+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 166 Dfg~a~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 240 (359)
T cd07876 166 DFGLARTACTN-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGT 240 (359)
T ss_pred cCCCccccccC-----ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99998643211 11223467889999999988888999999999999999999999996432110
Q ss_pred ------------------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCC
Q psy3914 274 ------------------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPG 311 (852)
Q Consensus 274 ------------------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~ 311 (852)
.....++.+++++.+||..||++|||+.+++.|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h----- 315 (359)
T cd07876 241 PSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH----- 315 (359)
T ss_pred CcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC-----
Confidence 001134678999999999999999999999998
Q ss_pred CCCc
Q psy3914 312 GYFK 315 (852)
Q Consensus 312 ~fF~ 315 (852)
+||.
T Consensus 316 p~~~ 319 (359)
T cd07876 316 PYIT 319 (359)
T ss_pred chhh
Confidence 7775
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=307.99 Aligned_cols=233 Identities=15% Similarity=0.224 Sum_probs=196.7
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PI 144 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L 144 (852)
.|+|++||.+.++.+++.|+||++... ...+.+.+|+++++.++||||++++++++.. ..+|+||||+. +|
T Consensus 3 ~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~--~~~~lv~e~~~~g~L 80 (280)
T cd05608 3 KGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTK--TDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCC--CeEEEEEeCCCCCCH
Confidence 799999999999999999999998761 2234567899999999999999999999987 88999999997 68
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccc
Q psy3914 145 FYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYS 224 (852)
Q Consensus 145 ~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~ 224 (852)
..++.........+++..++.++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++..+.... ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~----~~~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH-QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ----SKTK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC----cccc
Confidence 8777443344567899999999999999999999 8999999999999999999999999999986543211 1122
Q ss_pred cccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc---------------ccCcCCCChhHHHHHHHh
Q psy3914 225 RYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS---------------LSNIDNIPENLKRVYLEL 289 (852)
Q Consensus 225 ~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~---------------l~~~~~ip~~L~~li~~l 289 (852)
...|++.|+|||++.+..++.++|+|||||++|+|++|..||..... ......+|..+.+++.+|
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 235 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEAL 235 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHH
Confidence 34678899999999888888999999999999999999999954321 112346788999999999
Q ss_pred ccCCCCCCC-----CHHHHHHhhcCCCCCCcc
Q psy3914 290 ISERPNQRP-----NPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 290 L~~nP~~Rp-----s~~elL~~l~~~~~fF~n 316 (852)
|+.||.+|| ++.++++| +||+.
T Consensus 236 l~~~P~~R~~~~~~~~~~~l~h-----~~~~~ 262 (280)
T cd05608 236 LAKDPEKRLGFRDGNCDGLRTH-----PLFRD 262 (280)
T ss_pred hcCCHHHhcCCCCCCHHHHhcC-----hhhhc
Confidence 999999999 77889987 88865
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=315.12 Aligned_cols=230 Identities=17% Similarity=0.273 Sum_probs=194.9
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|++|.||.|+++.+++.|+||++.+ ......+.+|..+++.+ +||||+++++++++. ..+||||||+. +
T Consensus 5 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~--~~~~iv~Ey~~~g~ 82 (320)
T cd05590 5 KGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTP--DRLFFVMEFVNGGD 82 (320)
T ss_pred eCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcC--CEEEEEEcCCCCch
Confidence 89999999999999999999999976 23445667888888876 699999999999987 89999999998 6
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|..++.+ ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++...... ....
T Consensus 83 L~~~i~~----~~~l~~~~~~~~~~ql~~~L~~lH-~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~----~~~~ 153 (320)
T cd05590 83 LMFHIQK----SRRFDEARARFYAAEITSALMFLH-DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN----GKTT 153 (320)
T ss_pred HHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC----CCcc
Confidence 8777732 357899999999999999999999 999999999999999999999999999997642111 1112
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcCCCChhHHHHHHHhccC
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNIDNIPENLKRVYLELISE 292 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~~ip~~L~~li~~lL~~ 292 (852)
....||+.|+|||++.+..++.++|+|||||++|+|++|..||.+... ......++..+.+++++||..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~ 233 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTK 233 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccc
Confidence 235688999999999888889999999999999999999999965422 122456788999999999999
Q ss_pred CCCCCCCH------HHHHHhhcCCCCCCcch
Q psy3914 293 RPNQRPNP------ADFIMRNRKPGGYFKND 317 (852)
Q Consensus 293 nP~~Rps~------~elL~~l~~~~~fF~n~ 317 (852)
||.+||++ .+++.| +||.+.
T Consensus 234 dP~~R~~~~~~~~~~~~~~h-----~~f~~~ 259 (320)
T cd05590 234 NPTMRLGSLTLGGEEAILRH-----PFFKEL 259 (320)
T ss_pred CHHHCCCCCCCCCHHHHHcC-----CCcCCC
Confidence 99999998 888887 999764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-34 Score=314.43 Aligned_cols=239 Identities=16% Similarity=0.234 Sum_probs=200.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhC-CCCCcceEeeeEEc
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTL-RHPSILTFLDSVES 128 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~ 128 (852)
.|++.+.|| .|++|.||+|+++.+++.|+||++.+ .........|..++..+ .||+|+++++++++
T Consensus 1 df~~~~~lg--------~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~ 72 (323)
T cd05616 1 DFNFLMVLG--------KGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT 72 (323)
T ss_pred CceEEEEEe--------eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec
Confidence 488999999 99999999999999999999999986 22334566777777777 48999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. +.+|+||||+. +|..++.. .+.+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+||
T Consensus 73 ~--~~~~lv~E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp~Nill~~~~~~kL~Df 145 (323)
T cd05616 73 M--DRLYFVMEYVNGGDLMYQIQQ----VGRFKEPHAVFYAAEIAIGLFFLH-SKGIIYRDLKLDNVMLDSEGHIKIADF 145 (323)
T ss_pred C--CEEEEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCEEecCCCHHHeEECCCCcEEEccC
Confidence 7 89999999998 68777732 356889999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNI 275 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~ 275 (852)
|++...... ........||+.|+|||++.+..++.++|+|||||++|||++|..||.+... ...+
T Consensus 146 G~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p 221 (323)
T cd05616 146 GMCKENMWD----GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP 221 (323)
T ss_pred CCceecCCC----CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 998632211 1122245688999999999888889999999999999999999999965432 1224
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCH-----HHHHHhhcCCCCCCcch
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNP-----ADFIMRNRKPGGYFKND 317 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~-----~elL~~l~~~~~fF~n~ 317 (852)
..++..+.+++.+||..+|.+|++. .++++| +||...
T Consensus 222 ~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h-----~~~~~~ 263 (323)
T cd05616 222 KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH-----AFFRYI 263 (323)
T ss_pred CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC-----CCcCCC
Confidence 5788999999999999999999985 677776 888754
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=313.78 Aligned_cols=239 Identities=17% Similarity=0.244 Sum_probs=200.9
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCC-CcceEeeeEEc
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHP-SILTFLDSVES 128 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHP-nIlk~~d~~e~ 128 (852)
.|++.+.|| .|++|.||+|+++.+++.|+||++.+ ....+.+..|.+++..++|+ +|+++++++.+
T Consensus 1 ~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~ 72 (324)
T cd05587 1 DFNFLMVLG--------KGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT 72 (324)
T ss_pred CceEEEEEe--------eccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc
Confidence 489999999 99999999999999999999999976 23455677888999999865 58888999988
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. +.+|+||||+. +|..++.. ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+||
T Consensus 73 ~--~~~~lv~E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH-~~~ivH~dlkp~Nill~~~~~~kL~Df 145 (324)
T cd05587 73 M--DRLYFVMEYVNGGDLMYHIQQ----VGKFKEPHAVFYAAEIAIGLFFLH-SKGIIYRDLKLDNVMLDAEGHIKIADF 145 (324)
T ss_pred C--CEEEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCCHHHeEEcCCCCEEEeec
Confidence 7 89999999998 68877732 356889999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNI 275 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~ 275 (852)
|++..... .........||+.|+|||++.+..++.++|+|||||++|+|++|..||.+... ...+
T Consensus 146 g~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~ 221 (324)
T cd05587 146 GMCKENIF----GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP 221 (324)
T ss_pred CcceecCC----CCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 99763211 11122245688999999999888888999999999999999999999965432 1224
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCH-----HHHHHhhcCCCCCCcch
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNP-----ADFIMRNRKPGGYFKND 317 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~-----~elL~~l~~~~~fF~n~ 317 (852)
..+++.+.+++++||..||.+|++. .++++| +||...
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h-----p~~~~~ 263 (324)
T cd05587 222 KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH-----AFFRRI 263 (324)
T ss_pred CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC-----CCcCCC
Confidence 5688899999999999999999986 678776 899763
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=314.36 Aligned_cols=230 Identities=16% Similarity=0.261 Sum_probs=194.1
Q ss_pred cCCceEEEEEEEc---CCCeEEEEEEEeC------CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc
Q psy3914 72 KHTFWKFHGGKKK---GSNEKVTIFLNDS------ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE 142 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k---~~g~~VaVKv~~~------~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~ 142 (852)
.|+||.||.+++. .+++.|+||++.. ......+.+|+.+|+.++||||+++++.++.+ +.+|+||||+.
T Consensus 6 ~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~--~~~~lv~e~~~ 83 (323)
T cd05584 6 KGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTG--GKLYLILEYLS 83 (323)
T ss_pred ecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecC--CeEEEEEeCCC
Confidence 8999999999874 4688999999975 12334567899999999999999999999987 89999999998
Q ss_pred --cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCC
Q psy3914 143 --PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPM 220 (852)
Q Consensus 143 --~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~ 220 (852)
+|..++. ..+.+.+..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++...... .
T Consensus 84 ~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~ 154 (323)
T cd05584 84 GGELFMHLE----REGIFMEDTACFYLSEISLALEHLH-QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE----G 154 (323)
T ss_pred CchHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC----C
Confidence 6877773 2356888999999999999999999 899999999999999999999999999998632211 1
Q ss_pred cccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcCCCChhHHHHHHHh
Q psy3914 221 KRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNIDNIPENLKRVYLEL 289 (852)
Q Consensus 221 ~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~~ip~~L~~li~~l 289 (852)
.......|++.|+|||++.+..++.++|||||||++|||++|..||.+... ......+++.+.+++++|
T Consensus 155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 234 (323)
T cd05584 155 TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKL 234 (323)
T ss_pred CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH
Confidence 112235688899999999777788999999999999999999999965422 223456788999999999
Q ss_pred ccCCCCCCC-----CHHHHHHhhcCCCCCCcch
Q psy3914 290 ISERPNQRP-----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 290 L~~nP~~Rp-----s~~elL~~l~~~~~fF~n~ 317 (852)
|..+|.+|| ++.++++| +||...
T Consensus 235 l~~~p~~R~~~~~~~~~~l~~h-----~~~~~~ 262 (323)
T cd05584 235 LKRNPSSRLGAGPGDAAEVQSH-----PFFRHV 262 (323)
T ss_pred cccCHhHcCCCCCCCHHHHhcC-----CCcCCC
Confidence 999999999 89999997 899764
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-34 Score=314.77 Aligned_cols=240 Identities=14% Similarity=0.177 Sum_probs=202.3
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
..+|++.++|| .|+++.||.|.++.++..|++|++... .....+.+|+++++.++||||+++++++.++
T Consensus 4 ~~~y~~~~~lg--------~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 75 (333)
T cd06650 4 DDDFEKISELG--------AGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD 75 (333)
T ss_pred hhhhheecccc--------CCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC
Confidence 45799999999 899999999999999999999988762 2335688999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+.+|+||||+. +|.+++.+ .+.+++..+..++.||+.||.|||+..+++||||||+||+++.+|.+||+|||
T Consensus 76 --~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg 149 (333)
T cd06650 76 --GEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG 149 (333)
T ss_pred --CEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCC
Confidence 89999999997 79888843 35688999999999999999999954689999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc--------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS-------------- 273 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~-------------- 273 (852)
++...... ......++..|+|||++.+..++.++|+|||||++|+|++|..||.......
T Consensus 150 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 223 (333)
T cd06650 150 VSGQLIDS------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPA 223 (333)
T ss_pred cchhhhhh------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCcc
Confidence 98744321 1123457889999999987788899999999999999999999885321000
Q ss_pred -------------------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCC
Q psy3914 274 -------------------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKP 310 (852)
Q Consensus 274 -------------------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~ 310 (852)
....++.++.+++.+||..||.+||++.+++.|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h---- 299 (333)
T cd06650 224 ESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH---- 299 (333)
T ss_pred ccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC----
Confidence 001356788999999999999999999999997
Q ss_pred CCCCcch
Q psy3914 311 GGYFKND 317 (852)
Q Consensus 311 ~~fF~n~ 317 (852)
+||+..
T Consensus 300 -~~~~~~ 305 (333)
T cd06650 300 -AFIKRS 305 (333)
T ss_pred -HHHhcC
Confidence 788654
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=315.62 Aligned_cols=230 Identities=15% Similarity=0.238 Sum_probs=194.6
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|+++.||.|+++.+++.|+||++.. ......+.+|..+++.+ +||||+++++++++. +.+||||||+. +
T Consensus 5 ~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~--~~~~lv~e~~~~g~ 82 (329)
T cd05588 5 RGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE--SRLFFVIEFVSGGD 82 (329)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC--CEEEEEEeCCCCCC
Confidence 89999999999999999999999986 22345678899999888 699999999999987 89999999998 6
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|..++. ..+.+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++..... .....
T Consensus 83 L~~~~~----~~~~l~~~~~~~~~~qi~~~l~~lH-~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~----~~~~~ 153 (329)
T cd05588 83 LMFHMQ----RQRKLPEEHARFYSAEISLALNFLH-ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR----PGDTT 153 (329)
T ss_pred HHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCCHHHeEECCCCCEEECcCcccccccc----CCCcc
Confidence 877763 2367999999999999999999999 99999999999999999999999999999863211 11122
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc--------------------cccCcCCCChhHH
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK--------------------SLSNIDNIPENLK 283 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~--------------------~l~~~~~ip~~L~ 283 (852)
....||+.|+|||++.+..++.++|+|||||++|+|++|..||.... ....+..++..+.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 233 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAS 233 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHH
Confidence 34568899999999988888999999999999999999999994211 1122356788899
Q ss_pred HHHHHhccCCCCCCCC------HHHHHHhhcCCCCCCcch
Q psy3914 284 RVYLELISERPNQRPN------PADFIMRNRKPGGYFKND 317 (852)
Q Consensus 284 ~li~~lL~~nP~~Rps------~~elL~~l~~~~~fF~n~ 317 (852)
+++++||+.||.+|++ +.++++| +||.+.
T Consensus 234 ~li~~~L~~dP~~R~~~~~~~~~~~i~~h-----p~~~~~ 268 (329)
T cd05588 234 SVLKGFLNKDPKERLGCHPQTGFRDIKSH-----PFFRNI 268 (329)
T ss_pred HHHHHHhccCHHHcCCCCCCCCHHHHhcC-----CCCCCC
Confidence 9999999999999997 6889987 999763
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-34 Score=317.85 Aligned_cols=246 Identities=13% Similarity=0.140 Sum_probs=202.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.|| .|++|+||.|.++.+++.|+||++.+ ......+++|+.+++.++||||+++++.+++.
T Consensus 2 ~y~~~~~LG--------~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~ 73 (363)
T cd05628 2 DFESLKVIG--------RGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDK 73 (363)
T ss_pred CceEeEEEE--------eCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 589999999 99999999999999999999999986 23345678899999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
..+||||||+. +|.+++.+ .+.+++..++.++.||+.||.||| +.||+||||||+||+++.+|.+||+|||
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH-~~givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 74 --LNLYLIMEFLPGGDMMTLLMK----KDTLTEEETQFYIAETVLAIDSIH-QLGFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred --CeEEEEEcCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeEecCCCHHHeEECCCCCEEEeecc
Confidence 89999999998 68888743 367899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCC-------------------------------CcccccccCCCcccCCccccCCCCCcchhHHhHHHHH
Q psy3914 208 YMEKISEASCIP-------------------------------MKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILI 256 (852)
Q Consensus 208 ~a~~~~~~~~~~-------------------------------~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll 256 (852)
++..+....... ........||+.|+|||++.+..++.++|+|||||++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil 226 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHH
Confidence 987443211000 0001235789999999999888889999999999999
Q ss_pred HHHHhCCCCCCCCcccc-------------Cc--CCCChhHHHHHHHhccC--CCCCCCCHHHHHHhhcCCCCCCcchHH
Q psy3914 257 WEVFNGPLQSTNRKSLS-------------NI--DNIPENLKRVYLELISE--RPNQRPNPADFIMRNRKPGGYFKNDLI 319 (852)
Q Consensus 257 ~el~tG~~pf~~~~~l~-------------~~--~~ip~~L~~li~~lL~~--nP~~Rps~~elL~~l~~~~~fF~n~lv 319 (852)
|||++|..||.+..... .+ ..+++.+.+++.+|+.. ++..||++.++++| +||++.-.
T Consensus 227 ~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h-----p~f~~~~~ 301 (363)
T cd05628 227 YEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN-----PFFEGVDW 301 (363)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC-----CCCCCCCH
Confidence 99999999996532211 11 24677899999987652 23356899999997 99987543
Q ss_pred H
Q psy3914 320 D 320 (852)
Q Consensus 320 ~ 320 (852)
+
T Consensus 302 ~ 302 (363)
T cd05628 302 E 302 (363)
T ss_pred H
Confidence 3
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=321.76 Aligned_cols=243 Identities=12% Similarity=0.107 Sum_probs=200.6
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++++.|| .|+||+||+|+++.++..|+||++.. ......+.+|+.+++.++||||+++++.+++.
T Consensus 2 ~f~~~~~LG--------~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~ 73 (381)
T cd05626 2 MFVKIKTLG--------IGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDK 73 (381)
T ss_pred CceEEEEEe--------ecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecC
Confidence 489999999 99999999999999999999999976 23345688999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
.++|+||||+. +|.+++.+ ...+++..++.++.||+.||.||| ..+|+||||||+||+|+.+|.+||+|||
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~~LH-~~givHrDlKp~Nili~~~~~~kL~DFG 146 (381)
T cd05626 74 --DNLYFVMDYIPGGDMMSLLIR----MEVFPEVLARFYIAELTLAIESVH-KMGFIHRDIKPDNILIDLDGHIKLTDFG 146 (381)
T ss_pred --CEEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeeecCCcHHHEEECCCCCEEEeeCc
Confidence 89999999998 68888743 356889999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCC-------------------------------------------CCcccccccCCCcccCCccccCCCCC
Q psy3914 208 YMEKISEASCI-------------------------------------------PMKRYSRYEDQSTYQIPENSLSHVTK 244 (852)
Q Consensus 208 ~a~~~~~~~~~-------------------------------------------~~~~~~~~~gt~~Y~APE~~~~~~~~ 244 (852)
++..+...... .........||+.|+|||++.+..++
T Consensus 147 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 226 (381)
T cd05626 147 LCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYT 226 (381)
T ss_pred CCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCC
Confidence 87532110000 00001235689999999999778889
Q ss_pred cchhHHhHHHHHHHHHhCCCCCCCCccc---------------cCcCCCChhHHHHHHHhc--cCCCCCCCCHHHHHHhh
Q psy3914 245 CSTDMYGLGILIWEVFNGPLQSTNRKSL---------------SNIDNIPENLKRVYLELI--SERPNQRPNPADFIMRN 307 (852)
Q Consensus 245 ~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------~~~~~ip~~L~~li~~lL--~~nP~~Rps~~elL~~l 307 (852)
.++|||||||++|||++|..||...... .....+++++.+++.+|+ ..++..|+++.+++.|
T Consensus 227 ~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h- 305 (381)
T cd05626 227 QLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH- 305 (381)
T ss_pred CccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC-
Confidence 9999999999999999999999543211 112257889999999965 4555569999999997
Q ss_pred cCCCCCCcch
Q psy3914 308 RKPGGYFKND 317 (852)
Q Consensus 308 ~~~~~fF~n~ 317 (852)
+||...
T Consensus 306 ----p~f~~~ 311 (381)
T cd05626 306 ----PFFSEV 311 (381)
T ss_pred ----cccCCC
Confidence 899763
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=315.25 Aligned_cols=240 Identities=18% Similarity=0.211 Sum_probs=200.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEc---CCCeEEEEEEEeC------CCchHHHHHHHHHHHhCC-CCCcceEee
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKK---GSNEKVTIFLNDS------ADTYEPALSYVKKLKTLR-HPSILTFLD 124 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k---~~g~~VaVKv~~~------~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d 124 (852)
+|++.+.|| .|++|+||++++. .++..|+||++.+ ......+.+|+++++.++ ||||+++++
T Consensus 1 ~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~ 72 (332)
T cd05614 1 NFELLKVLG--------TGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHY 72 (332)
T ss_pred CceEEEEEe--------ecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEE
Confidence 489999999 9999999998874 4789999999975 223456788999999995 999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
+++.+ +.+|+||||+. +|..++.. ...+++..+..++.||+.||.||| +.+++||||||+|||++.+|.+|
T Consensus 73 ~~~~~--~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivHrDlkp~Nili~~~~~~k 145 (332)
T cd05614 73 AFQTE--AKLHLILDYVSGGEMFTHLYQ----RDNFSEDEVRFYSGEIILALEHLH-KLGIVYRDIKLENILLDSEGHVV 145 (332)
T ss_pred EEecC--CEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCcEecCCCHHHeEECCCCCEE
Confidence 99987 89999999998 68887742 356899999999999999999999 89999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcc----------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKS---------- 271 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~---------- 271 (852)
|+|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.....
T Consensus 146 l~DfG~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 222 (332)
T cd05614 146 LTDFGLSKEFLSEEK---ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRR 222 (332)
T ss_pred EeeCcCCccccccCC---CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHH
Confidence 999999874322111 11123568899999999854 3478899999999999999999999953211
Q ss_pred -----ccCcCCCChhHHHHHHHhccCCCCCCC-----CHHHHHHhhcCCCCCCcch
Q psy3914 272 -----LSNIDNIPENLKRVYLELISERPNQRP-----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 272 -----l~~~~~ip~~L~~li~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n~ 317 (852)
......+++.+.+++.+||+.||++|| ++.++++| +||++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h-----~~~~~~ 273 (332)
T cd05614 223 ILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH-----PFFKGL 273 (332)
T ss_pred HhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC-----CCcCCC
Confidence 112346788999999999999999999 78899997 899764
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=321.56 Aligned_cols=242 Identities=14% Similarity=0.215 Sum_probs=199.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
.|++++.|| .|++|.||+|.+..+|+.|+||++... .....+.+|+.+|+.++||||+++++++....
T Consensus 1 ~~~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 72 (372)
T cd07853 1 DVEPDRPIG--------YGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPH 72 (372)
T ss_pred CCcccceee--------eCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCC
Confidence 378899999 999999999999999999999998651 23356789999999999999999999998761
Q ss_pred ---CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 131 ---KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 131 ---~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
...+|+||||+. +|...+. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+||
T Consensus 73 ~~~~~~~~lv~e~~~~~l~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH-~~~ivH~dlkp~Nili~~~~~~kL~Df 147 (372)
T cd07853 73 IDPFEEIYVVTELMQSDLHKIIV----SPQPLSSDHVKVFLYQILRGLKYLH-SAGILHRDIKPGNLLVNSNCVLKICDF 147 (372)
T ss_pred ccccceEEEEeeccccCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCCChHHEEECCCCCEEeccc
Confidence 127999999998 6776662 3457899999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------ 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------ 273 (852)
|++....... ........+++.|+|||++.+ ..++.++|||||||++|||++|..||.+.....
T Consensus 148 g~a~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~ 224 (372)
T cd07853 148 GLARVEEPDE---SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTP 224 (372)
T ss_pred cceeecccCc---cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCC
Confidence 9987432211 111223456789999999854 457889999999999999999999996432110
Q ss_pred -------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 274 -------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 274 -------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
....+++.+.+++.+||..||.+||++.+++.| +||...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h-----p~~~~~ 294 (372)
T cd07853 225 SLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH-----PYLDEG 294 (372)
T ss_pred CHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC-----HhhCCC
Confidence 112356788999999999999999999999997 888663
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=313.82 Aligned_cols=230 Identities=17% Similarity=0.233 Sum_probs=194.6
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|++|.||+|+++.+++.|+||++.. ......+..|.++++.+ +||||+++++++++. ..+|+||||+. +
T Consensus 5 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~--~~~~lv~E~~~~~~ 82 (321)
T cd05591 5 KGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTK--DRLFFVMEYVNGGD 82 (321)
T ss_pred cCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--CeEEEEEeCCCCCc
Confidence 89999999999999999999999986 23345567888888866 799999999999987 89999999998 6
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|..++.+ ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++...... ....
T Consensus 83 L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~----~~~~ 153 (321)
T cd05591 83 LMFQIQR----SRKFDEPRSRFYAAEVTLALMFLH-RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN----GVTT 153 (321)
T ss_pred HHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCCHHHeEECCCCCEEEeecccceecccC----Cccc
Confidence 8777732 356889999999999999999999 899999999999999999999999999998643211 1112
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----------cCcCCCChhHHHHHHHhccC
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-----------SNIDNIPENLKRVYLELISE 292 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-----------~~~~~ip~~L~~li~~lL~~ 292 (852)
....|++.|+|||++.+..++.++|+|||||++|+|++|..||.+.... .....++..+.+++++||..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~ 233 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTK 233 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcc
Confidence 2456888999999998888899999999999999999999999654321 12345789999999999999
Q ss_pred CCCCCC-------CHHHHHHhhcCCCCCCcch
Q psy3914 293 RPNQRP-------NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 293 nP~~Rp-------s~~elL~~l~~~~~fF~n~ 317 (852)
+|.+|+ ++.++++| +||...
T Consensus 234 dp~~R~~~~~~~~~~~~~~~h-----p~~~~~ 260 (321)
T cd05591 234 NPNKRLGCVASQGGEDAIKQH-----PFFKEI 260 (321)
T ss_pred CHHHcCCCCCCCCCHHHHhcC-----CccCCC
Confidence 999999 88999987 899663
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=314.64 Aligned_cols=230 Identities=18% Similarity=0.268 Sum_probs=191.0
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHH-HHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVK-KLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~-~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|++|+||+|+++.+|+.|+||++.. ......+.+|.. +++.++||||+++++.+++. ..+|+||||+. +
T Consensus 5 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~--~~~~lv~e~~~~g~ 82 (323)
T cd05575 5 KGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTA--DKLYFVLDYVNGGE 82 (323)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeC--CEEEEEEcCCCCCC
Confidence 89999999999999999999999986 122233344443 56789999999999999987 89999999998 6
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|..++.+ ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++...... ....
T Consensus 83 L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH-~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~----~~~~ 153 (323)
T cd05575 83 LFFHLQR----ERSFPEPRARFYAAEIASALGYLH-SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH----SKTT 153 (323)
T ss_pred HHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC----CCcc
Confidence 8877742 357899999999999999999999 899999999999999999999999999998632111 1122
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcCCCChhHHHHHHHhccC
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNIDNIPENLKRVYLELISE 292 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~~ip~~L~~li~~lL~~ 292 (852)
....||+.|+|||++.+..++.++|+|||||++|+|++|..||.+... ......++..+.+++++||..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~ 233 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQK 233 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhc
Confidence 245688899999999888889999999999999999999999965421 223456899999999999999
Q ss_pred CCCCCCCH----HHHHHhhcCCCCCCcch
Q psy3914 293 RPNQRPNP----ADFIMRNRKPGGYFKND 317 (852)
Q Consensus 293 nP~~Rps~----~elL~~l~~~~~fF~n~ 317 (852)
+|.+||++ .++++| +||.+.
T Consensus 234 ~p~~R~~~~~~~~~il~~-----~~~~~~ 257 (323)
T cd05575 234 DRTKRLGAKDDFLEIKNH-----VFFSSI 257 (323)
T ss_pred CHHhCCCCCCCHHHHHcC-----CCcCCC
Confidence 99999987 577776 898763
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-34 Score=306.07 Aligned_cols=237 Identities=20% Similarity=0.270 Sum_probs=197.2
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.+| .|+++.||+|+++.+|+.|++|.+.. ......+.+|+.+++.++||||+++++++.+.
T Consensus 1 ~y~~~~~l~--------~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~- 71 (284)
T cd07839 1 KYEKLEKIG--------EGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSD- 71 (284)
T ss_pred CceeEEEec--------ccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccC-
Confidence 489999999 89999999999999999999999875 22234677899999999999999999999987
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+|+|+||+. +|..++.. ..+.+++..+..++.||++||.||| ..+++||||+|+||+++.+|.+||+|||++
T Consensus 72 -~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH-~~~i~H~dl~~~nil~~~~~~~~l~dfg~~ 146 (284)
T cd07839 72 -KKLTLVFEYCDQDLKKYFDS---CNGDIDPEIVKSFMFQLLKGLAFCH-SHNVLHRDLKPQNLLINKNGELKLADFGLA 146 (284)
T ss_pred -CceEEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH-HCCEecCCCCHHHEEEcCCCcEEECccchh
Confidence 89999999998 77777632 2356899999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------- 272 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------- 272 (852)
...... ........++..|+|||++.+ ..++.++|+|||||++|+|++|..|+......
T Consensus 147 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 222 (284)
T cd07839 147 RAFGIP----VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE 222 (284)
T ss_pred hccCCC----CCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCCh
Confidence 754321 112223456779999999844 45788999999999999999998775221110
Q ss_pred -------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 -------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 -------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.....+++.+.+++++||..||.+|||+.+++.| +||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h-----~~f 284 (284)
T cd07839 223 ESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH-----PYF 284 (284)
T ss_pred HHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC-----CCC
Confidence 0113467889999999999999999999999997 887
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >KOG0667|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=327.07 Aligned_cols=237 Identities=20% Similarity=0.229 Sum_probs=202.3
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCC-C-----CCcceEeeeE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLR-H-----PSILTFLDSV 126 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~Lr-H-----PnIlk~~d~~ 126 (852)
.+|+|.+.|| .|+||.|-+|.++.|++.||||+++. .........|+++|..|+ | =|||+++|+|
T Consensus 186 ~rY~V~e~LG--------kGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F 257 (586)
T KOG0667|consen 186 YRYEVLEVLG--------KGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF 257 (586)
T ss_pred EEEEEEEEec--------ccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc
Confidence 3799999999 99999999999999999999999987 566778899999999998 4 3799999999
Q ss_pred EcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC--CcEEE
Q psy3914 127 ESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC--GEWKL 203 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~--g~~KL 203 (852)
... +++|||+|.+. +|+++|+. +....++...++.++.||+.||.||| ..+|||+||||+|||+... ..+||
T Consensus 258 ~fr--~HlciVfELL~~NLYellK~--n~f~Glsl~~ir~~~~Qil~~L~~L~-~l~IIHcDLKPENILL~~~~r~~vKV 332 (586)
T KOG0667|consen 258 YFR--NHLCIVFELLSTNLYELLKN--NKFRGLSLPLVRKFAQQILTALLFLH-ELGIIHCDLKPENILLKDPKRSRIKV 332 (586)
T ss_pred ccc--cceeeeehhhhhhHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeeccCChhheeeccCCcCceeE
Confidence 988 99999999999 89999953 33456999999999999999999999 9999999999999999864 46999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccCc--------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI-------- 275 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~~-------- 275 (852)
+|||.++...... + ....+..|+|||++.+..|+.++||||||||+.||++|.+.|.|.+..+++
T Consensus 333 IDFGSSc~~~q~v------y-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG 405 (586)
T KOG0667|consen 333 IDFGSSCFESQRV------Y-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLG 405 (586)
T ss_pred EecccccccCCcc------e-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhC
Confidence 9999998543211 1 345567999999999999999999999999999999998777554221110
Q ss_pred ---------------------------------------------------CCCC---------------hhHHHHHHHh
Q psy3914 276 ---------------------------------------------------DNIP---------------ENLKRVYLEL 289 (852)
Q Consensus 276 ---------------------------------------------------~~ip---------------~~L~~li~~l 289 (852)
...| ..+.+++++|
T Consensus 406 ~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~ 485 (586)
T KOG0667|consen 406 LPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRC 485 (586)
T ss_pred CCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHH
Confidence 0123 2478999999
Q ss_pred ccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 290 ISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 290 L~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
|..||..|+|+.+.++| +||.
T Consensus 486 L~~dP~~R~tp~qal~H-----pfl~ 506 (586)
T KOG0667|consen 486 LEWDPAERITPAQALNH-----PFLT 506 (586)
T ss_pred hccCchhcCCHHHHhcC-----cccc
Confidence 99999999999999998 8886
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=302.23 Aligned_cols=235 Identities=23% Similarity=0.402 Sum_probs=200.1
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCch----HHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTY----EPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~----~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
|++++.|| .|++|+||+++++.+++.|++|+++..... ....+|+..++.++||||+++++++.+.
T Consensus 1 y~~~~~lg--------~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-- 70 (260)
T PF00069_consen 1 YRLVKKLG--------SGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDD-- 70 (260)
T ss_dssp EEEEEEEE--------EESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEES--
T ss_pred CEEeEEEE--------eCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccc--
Confidence 89999999 999999999999999999999999983322 2234589999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+|+|||++. +|.+++. ....++...+..++.||+.||.+|| +.+++|+||||+||+++.+|.++|+|||++
T Consensus 71 ~~~~~v~~~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~Lh-~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~ 145 (260)
T PF00069_consen 71 NYLYIVMEYCPGGSLQDYLQ----KNKPLSEEEILKIAYQILEALAYLH-SKGIVHRDIKPENILLDENGEVKLIDFGSS 145 (260)
T ss_dssp SEEEEEEEEETTEBHHHHHH----HHSSBBHHHHHHHHHHHHHHHHHHH-HTTEEESSBSGGGEEESTTSEEEESSGTTT
T ss_pred cccccccccccccccccccc----ccccccccccccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence 89999999999 6988885 2367899999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCc---ccc------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRK---SLS------------ 273 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~---~l~------------ 273 (852)
.... ..........++..|+|||++. +..++.++|+|||||++|+|++|..||.... ...
T Consensus 146 ~~~~----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 221 (260)
T PF00069_consen 146 VKLS----ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPS 221 (260)
T ss_dssp EEST----STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHH
T ss_pred cccc----ccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccc
Confidence 6431 1122233456788999999996 8889999999999999999999999996541 110
Q ss_pred ---CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 274 ---NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 274 ---~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.....+..+.+++++||+.+|++||++.++++| +||
T Consensus 222 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~-----~~~ 260 (260)
T PF00069_consen 222 SSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH-----PWF 260 (260)
T ss_dssp HTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS-----GGG
T ss_pred cccccchhHHHHHHHHHHHccCChhHCcCHHHHhcC-----CCC
Confidence 012234799999999999999999999999997 776
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=322.56 Aligned_cols=242 Identities=12% Similarity=0.113 Sum_probs=202.9
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.|| .|+++.||+|+++.+++.|+||++.. ......+.+|+.+|+.++||||+++++.+++.
T Consensus 2 ~y~~~~~lG--------~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~ 73 (376)
T cd05598 2 MFVKIKTIG--------IGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDK 73 (376)
T ss_pred CceEEEEEE--------eCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcC
Confidence 599999999 99999999999999999999999975 23456788999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+.+||||||+. +|.+++.+ .+.+++..+..++.||+.||.||| +.+|+||||||+||+++.+|.+||+|||
T Consensus 74 --~~~~lv~E~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH-~~~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 74 --DNLYFVMDYIPGGDMMSLLIR----LGIFEEDLARFYIAELTCAIESVH-KMGFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred --CEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 89999999997 78888843 356889999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccC---------------------------------------CCCcccccccCCCcccCCccccCCCCCcchh
Q psy3914 208 YMEKISEASC---------------------------------------IPMKRYSRYEDQSTYQIPENSLSHVTKCSTD 248 (852)
Q Consensus 208 ~a~~~~~~~~---------------------------------------~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sD 248 (852)
++..+..... ..........||+.|+|||++.+..++.++|
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 226 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 226 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCccee
Confidence 9753210000 0000011346899999999998888899999
Q ss_pred HHhHHHHHHHHHhCCCCCCCCccc---------------cCcCCCChhHHHHHHHhccCCCCCCC---CHHHHHHhhcCC
Q psy3914 249 MYGLGILIWEVFNGPLQSTNRKSL---------------SNIDNIPENLKRVYLELISERPNQRP---NPADFIMRNRKP 310 (852)
Q Consensus 249 IwSLG~ll~el~tG~~pf~~~~~l---------------~~~~~ip~~L~~li~~lL~~nP~~Rp---s~~elL~~l~~~ 310 (852)
||||||++|||++|..||.+.... .....+++.+.+++.+|+ .+|.+|+ ++.++++|
T Consensus 227 iwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h---- 301 (376)
T cd05598 227 WWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH---- 301 (376)
T ss_pred eeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC----
Confidence 999999999999999999654321 112357889999999987 5999999 99999997
Q ss_pred CCCCcch
Q psy3914 311 GGYFKND 317 (852)
Q Consensus 311 ~~fF~n~ 317 (852)
+||+..
T Consensus 302 -~~~~~~ 307 (376)
T cd05598 302 -PFFKGI 307 (376)
T ss_pred -CCcCCC
Confidence 899763
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=298.84 Aligned_cols=239 Identities=12% Similarity=0.160 Sum_probs=201.2
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-------CchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-------DTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-------~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
.|++++.|| .|+++.||.|.+..+++.|+||++... .....+.+|+.++++++||||++++++++
T Consensus 3 ~~~~~~~lg--------~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 74 (263)
T cd06625 3 NWRRGKLLG--------QGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLR 74 (263)
T ss_pred cccccceec--------CCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEc
Confidence 489999999 899999999999999999999998751 12356888999999999999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
++ ..+|+|+||+. +|.+.+.. ...+++..+..++.||+.||.||| +.+++||||+|+||+++.++.++|+|
T Consensus 75 ~~--~~~~~v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH-~~~i~H~dl~p~nilv~~~~~~~l~d 147 (263)
T cd06625 75 DD--ETLSIFMEYMPGGSVKDQLKA----YGALTETVTRKYTRQILEGVEYLH-SNMIVHRDIKGANILRDSAGNVKLGD 147 (263)
T ss_pred cC--CeEEEEEEECCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEEcCCCCEEEee
Confidence 87 89999999997 68887743 256889999999999999999999 99999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-------------c
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-------------L 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-------------l 272 (852)
||++......... ........++..|+|||++.+..++.++|+|||||++|+|++|..||.+... .
T Consensus 148 fg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 226 (263)
T cd06625 148 FGASKRLQTICSS-GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNP 226 (263)
T ss_pred cccceeccccccc-cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCC
Confidence 9998644321111 1111234567789999999777788999999999999999999999854322 1
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.....++..+.+++++||..+|.+||++.++++| +||
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~-----~~~ 263 (263)
T cd06625 227 QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH-----FFV 263 (263)
T ss_pred CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC-----CCC
Confidence 2234678899999999999999999999999997 665
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=321.08 Aligned_cols=242 Identities=14% Similarity=0.139 Sum_probs=200.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.|| .|++|+||.|.++.+|+.|+||++.+ ......+++|+++++.++||||+++++++++.
T Consensus 2 ~y~~~~~lG--------~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~ 73 (377)
T cd05629 2 DFHTVKVIG--------KGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDA 73 (377)
T ss_pred CceEeEEEe--------ecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC
Confidence 589999999 99999999999999999999999875 23345688999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
.++||||||+. +|.+++.. ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH-~~givHrDlkp~NIll~~~~~~kl~DfG 146 (377)
T cd05629 74 --QYLYLIMEFLPGGDLMTMLIK----YDTFSEDVTRFYMAECVLAIEAVH-KLGFIHRDIKPDNILIDRGGHIKLSDFG 146 (377)
T ss_pred --CeeEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccCCCHHHEEECCCCCEEEeecc
Confidence 89999999997 78888742 357889999999999999999999 9999999999999999999999999999
Q ss_pred hhhccccccCC----------CC---------------------------------cccccccCCCcccCCccccCCCCC
Q psy3914 208 YMEKISEASCI----------PM---------------------------------KRYSRYEDQSTYQIPENSLSHVTK 244 (852)
Q Consensus 208 ~a~~~~~~~~~----------~~---------------------------------~~~~~~~gt~~Y~APE~~~~~~~~ 244 (852)
+++.+...... .. .......||+.|+|||++.+..++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 226 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG 226 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC
Confidence 98632110000 00 000124689999999999888889
Q ss_pred cchhHHhHHHHHHHHHhCCCCCCCCccc-------------c--CcCCCChhHHHHHHHhccCCCCCC---CCHHHHHHh
Q psy3914 245 CSTDMYGLGILIWEVFNGPLQSTNRKSL-------------S--NIDNIPENLKRVYLELISERPNQR---PNPADFIMR 306 (852)
Q Consensus 245 ~~sDIwSLG~ll~el~tG~~pf~~~~~l-------------~--~~~~ip~~L~~li~~lL~~nP~~R---ps~~elL~~ 306 (852)
.++|||||||++|||++|..||.+.... . ....++..+.+++.+||. +|..| +++.+++.|
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 227 QECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred CceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 9999999999999999999999643221 1 112467889999999997 66665 599999997
Q ss_pred hcCCCCCCcch
Q psy3914 307 NRKPGGYFKND 317 (852)
Q Consensus 307 l~~~~~fF~n~ 317 (852)
+||...
T Consensus 306 -----p~~~~~ 311 (377)
T cd05629 306 -----PFFRGV 311 (377)
T ss_pred -----CCcCCC
Confidence 899764
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-34 Score=319.12 Aligned_cols=241 Identities=15% Similarity=0.202 Sum_probs=203.5
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
...|++.+.|| .|++|.||+|+++.++..|+||++.+ ......+.+|+.+++.++||||++++++++
T Consensus 42 ~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~ 113 (370)
T cd05596 42 AEDFDVIKVIG--------RGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ 113 (370)
T ss_pred HHHcEEEEEEe--------eCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 34699999999 99999999999999999999999975 233455788999999999999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
+. ..+|+||||+. +|..++.. ..+++..+..++.||+.||.||| +.+++||||||+|||++.+|.+||+|
T Consensus 114 ~~--~~~~lv~Ey~~gg~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~~LH-~~~ivHrDLkp~NILl~~~~~~kL~D 185 (370)
T cd05596 114 DD--KYLYMVMEYMPGGDLVNLMSN-----YDIPEKWARFYTAEVVLALDAIH-SMGFIHRDVKPDNMLLDKSGHLKLAD 185 (370)
T ss_pred cC--CEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCCHHHEEEcCCCCEEEEe
Confidence 87 89999999997 78888742 45788999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccC----CCCCcchhHHhHHHHHHHHHhCCCCCCCCcc----------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS----HVTKCSTDMYGLGILIWEVFNGPLQSTNRKS---------- 271 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~----~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~---------- 271 (852)
||++........ .......||+.|+|||++.+ ..++.++|+|||||++|||++|..||.+...
T Consensus 186 fG~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~ 262 (370)
T cd05596 186 FGTCMKMDANGM---VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDH 262 (370)
T ss_pred ccceeeccCCCc---ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcC
Confidence 999875432111 11224568999999999843 3478899999999999999999999965422
Q ss_pred ---ccCc--CCCChhHHHHHHHhccCCCCC--CCCHHHHHHhhcCCCCCCcch
Q psy3914 272 ---LSNI--DNIPENLKRVYLELISERPNQ--RPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 272 ---l~~~--~~ip~~L~~li~~lL~~nP~~--Rps~~elL~~l~~~~~fF~n~ 317 (852)
+... ..++..+.+++++||..+|.+ |+++.++++| +||.+.
T Consensus 263 ~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h-----~~~~~~ 310 (370)
T cd05596 263 KNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH-----PFFKND 310 (370)
T ss_pred CCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC-----cccCCC
Confidence 1111 257889999999999999988 9999999998 899864
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=311.53 Aligned_cols=230 Identities=16% Similarity=0.266 Sum_probs=195.6
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|++|+||+|+++.+++.|+||++.+ ......+.+|..+++.+ +||||+++++++++. ..+|+||||+. +
T Consensus 5 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~ 82 (318)
T cd05570 5 KGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTK--DRLFFVMEYVNGGD 82 (318)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--CEEEEEEcCCCCCC
Confidence 89999999999999999999999986 23445677888888888 699999999999987 89999999998 6
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|..++.+ ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++...... ....
T Consensus 83 L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH-~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~ 153 (318)
T cd05570 83 LMFHIQR----SGRFDEPRARFYAAEIVLGLQFLH-ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG----GVTT 153 (318)
T ss_pred HHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC----CCcc
Confidence 8777732 357899999999999999999999 999999999999999999999999999998632111 1111
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcCCCChhHHHHHHHhccC
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNIDNIPENLKRVYLELISE 292 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~~ip~~L~~li~~lL~~ 292 (852)
....|++.|+|||++.+..++.++|+|||||++|+|++|..||.+... ......+++.+.+++++||..
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~ 233 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTK 233 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccC
Confidence 234678899999999888889999999999999999999999964321 122356889999999999999
Q ss_pred CCCCCCCH-----HHHHHhhcCCCCCCcch
Q psy3914 293 RPNQRPNP-----ADFIMRNRKPGGYFKND 317 (852)
Q Consensus 293 nP~~Rps~-----~elL~~l~~~~~fF~n~ 317 (852)
+|.+||++ .+++.| +||.+.
T Consensus 234 dP~~R~s~~~~~~~~ll~~-----~~~~~~ 258 (318)
T cd05570 234 NPEKRLGCLPTGEQDIKGH-----PFFREI 258 (318)
T ss_pred CHHHcCCCCCCCHHHHhcC-----CCcCCC
Confidence 99999999 999987 899774
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=310.44 Aligned_cols=233 Identities=15% Similarity=0.225 Sum_probs=194.3
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|+++.||+|+++.+|+.|+||++.. .........|..++..+ +||||+++++.+++. +++|+||||+. +
T Consensus 5 ~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--~~~~lv~E~~~~g~ 82 (316)
T cd05620 5 KGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTK--EHLFFVMEFLNGGD 82 (316)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeC--CEEEEEECCCCCCc
Confidence 89999999999999999999999986 23445667787777754 899999999999987 89999999998 6
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|..++.. ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++...... ....
T Consensus 83 L~~~i~~----~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~ 153 (316)
T cd05620 83 LMFHIQD----KGRFDLYRATFYAAEIVCGLQFLH-SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG----DNRA 153 (316)
T ss_pred HHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC----CCce
Confidence 8777732 357889999999999999999999 899999999999999999999999999997632111 1122
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcCCCChhHHHHHHHhccC
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNIDNIPENLKRVYLELISE 292 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~~ip~~L~~li~~lL~~ 292 (852)
....||+.|+|||++.+..++.++|+|||||++|+|++|..||.+... ......++..+.+++++||..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 233 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFER 233 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHccC
Confidence 345688999999999888889999999999999999999999965422 112345788999999999999
Q ss_pred CCCCCCCH-HHHHHhhcCCCCCCcchHHH
Q psy3914 293 RPNQRPNP-ADFIMRNRKPGGYFKNDLID 320 (852)
Q Consensus 293 nP~~Rps~-~elL~~l~~~~~fF~n~lv~ 320 (852)
||.+|+++ +++++| +||++....
T Consensus 234 dP~~R~~~~~~~~~h-----~~f~~~~~~ 257 (316)
T cd05620 234 DPTRRLGVVGNIRGH-----PFFKTINWT 257 (316)
T ss_pred CHHHcCCChHHHHcC-----CCcCCCCHH
Confidence 99999998 467776 899875433
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=321.10 Aligned_cols=242 Identities=12% Similarity=0.132 Sum_probs=201.6
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.|| .|++|+||+|+++.+++.|+||++.. ......+.+|+++++.++||||+++++.+.+.
T Consensus 2 ~f~~~~~LG--------~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~ 73 (382)
T cd05625 2 MFVKIKTLG--------IGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK 73 (382)
T ss_pred CcEEEEEEE--------eCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC
Confidence 489999999 99999999999999999999999976 23345788999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
..+|+||||+. +|.+++.+ .+.+++..+..++.||+.||.||| +.+|+||||||+|||++.+|.+||+|||
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~al~~lH-~~~ivHrDlKp~NILl~~~g~~kL~DFG 146 (382)
T cd05625 74 --DNLYFVMDYIPGGDMMSLLIR----MGIFPEDLARFYIAELTCAVESVH-KMGFIHRDIKPDNILIDRDGHIKLTDFG 146 (382)
T ss_pred --CEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEECCCCCEEEeECC
Confidence 89999999998 68888743 256889999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccC-------------------------------------------CCCcccccccCCCcccCCccccCCCCC
Q psy3914 208 YMEKISEASC-------------------------------------------IPMKRYSRYEDQSTYQIPENSLSHVTK 244 (852)
Q Consensus 208 ~a~~~~~~~~-------------------------------------------~~~~~~~~~~gt~~Y~APE~~~~~~~~ 244 (852)
++..+..... ..........||+.|+|||++.+..++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 226 (382)
T cd05625 147 LCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYT 226 (382)
T ss_pred CCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCC
Confidence 9753210000 000001234689999999999888899
Q ss_pred cchhHHhHHHHHHHHHhCCCCCCCCccc---------------cCcCCCChhHHHHHHHhccCCCCCCCC---HHHHHHh
Q psy3914 245 CSTDMYGLGILIWEVFNGPLQSTNRKSL---------------SNIDNIPENLKRVYLELISERPNQRPN---PADFIMR 306 (852)
Q Consensus 245 ~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------~~~~~ip~~L~~li~~lL~~nP~~Rps---~~elL~~ 306 (852)
.++|||||||++|||++|..||.+.... .....+++.+.+++.+|+ .+|.+|++ +.+++.|
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 227 QLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred CeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 9999999999999999999999654221 112457889999999987 59999997 9999987
Q ss_pred hcCCCCCCcch
Q psy3914 307 NRKPGGYFKND 317 (852)
Q Consensus 307 l~~~~~fF~n~ 317 (852)
+||+..
T Consensus 306 -----p~f~~~ 311 (382)
T cd05625 306 -----PFFKTI 311 (382)
T ss_pred -----CCcCCc
Confidence 899763
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=315.79 Aligned_cols=240 Identities=13% Similarity=0.185 Sum_probs=203.2
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.|| .|++++||+|+++.+|+.|+||++.. ......+.+|+.+++.++||||+++++.+++.
T Consensus 2 ~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~ 73 (330)
T cd05601 2 DFDVKSLVG--------RGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDK 73 (330)
T ss_pred CceEEEEEE--------eccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecC
Confidence 589999999 99999999999999999999999986 22455688999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
..+||||||+. +|.+++.+. ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||
T Consensus 74 --~~~~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH-~~~i~H~Dlkp~NIll~~~~~~kL~Dfg 147 (330)
T cd05601 74 --DNLYLVMEYQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVH-QMGYVHRDIKPENVLIDRTGHIKLADFG 147 (330)
T ss_pred --CeEEEEECCCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH-HCCeEcccCchHheEECCCCCEEeccCC
Confidence 89999999997 798888432 257899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCcccc------CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSL------SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------- 272 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~------~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------- 272 (852)
++..+...... ......||+.|+|||++. ...++.++|||||||++|+|++|..||.+....
T Consensus 148 ~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~ 224 (330)
T cd05601 148 SAARLTANKMV---NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNF 224 (330)
T ss_pred CCeECCCCCce---eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcC
Confidence 98754322111 111246788999999974 456778999999999999999999999543211
Q ss_pred ------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 ------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 ------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....++..+.+++++||. +|.+||++.+++.| +||...
T Consensus 225 ~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h-----~~~~~~ 269 (330)
T cd05601 225 QRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH-----PFFSKI 269 (330)
T ss_pred CCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC-----CCcCCC
Confidence 1123578899999999998 99999999999997 999763
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=313.92 Aligned_cols=242 Identities=17% Similarity=0.265 Sum_probs=195.5
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEE-----cCCCeEEEEEEEeCC---CchHHHHHHHHHHHhC-CCCCcceEee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKK-----KGSNEKVTIFLNDSA---DTYEPALSYVKKLKTL-RHPSILTFLD 124 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~-----k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~L-rHPnIlk~~d 124 (852)
.+|++++.|| .|+||.||.|.+ +.++..|+||++... .....+.+|+.+|+.+ +||||+++++
T Consensus 7 ~~~~~~~~lG--------~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~ 78 (338)
T cd05102 7 DRLRLGKVLG--------HGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLG 78 (338)
T ss_pred hHceeeeEec--------cCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEe
Confidence 4699999999 999999999975 344578999998752 2345688999999999 8999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhhc------------------------------------------------
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLKE------------------------------------------------ 154 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~------------------------------------------------ 154 (852)
++... ...+|+||||+. +|.+++......
T Consensus 79 ~~~~~-~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T cd05102 79 ACTKP-NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGST 157 (338)
T ss_pred EecCC-CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccc
Confidence 88763 256899999998 799888532110
Q ss_pred ----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccc
Q psy3914 155 ----------NNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYS 224 (852)
Q Consensus 155 ----------~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~ 224 (852)
...++...+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||+++....... .....
T Consensus 158 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~--~~~~~ 234 (338)
T cd05102 158 NPPQETDDLWKSPLTMEDLICYSFQVARGMEFLA-SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD--YVRKG 234 (338)
T ss_pred ccchhccccccCCCCHHHHHHHHHHHHHHHHHHH-HCCEECCCCccceEEEcCCCcEEEeecccccccccCcc--hhccc
Confidence 124778888999999999999999 89999999999999999999999999999875422111 11112
Q ss_pred cccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-------------ccCcCCCChhHHHHHHHhc
Q psy3914 225 RYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS-------------LSNIDNIPENLKRVYLELI 290 (852)
Q Consensus 225 ~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~-------------l~~~~~ip~~L~~li~~lL 290 (852)
...++..|+|||++.+..++.++|||||||++|||++ |..||.+... ......+++.+..++.+||
T Consensus 235 ~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 314 (338)
T cd05102 235 SARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACW 314 (338)
T ss_pred CCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHc
Confidence 2345678999999977888999999999999999997 9999864321 1224567889999999999
Q ss_pred cCCCCCCCCHHHHHHhh
Q psy3914 291 SERPNQRPNPADFIMRN 307 (852)
Q Consensus 291 ~~nP~~Rps~~elL~~l 307 (852)
+.+|..||++.++++.+
T Consensus 315 ~~dp~~RPs~~el~~~l 331 (338)
T cd05102 315 QGDPKERPTFSALVEIL 331 (338)
T ss_pred cCChhhCcCHHHHHHHH
Confidence 99999999999999864
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=316.45 Aligned_cols=237 Identities=15% Similarity=0.185 Sum_probs=197.0
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|++|.||.|.+..+++.|+||++.. ......+.+|+.+++.++||||+++++++...
T Consensus 17 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 88 (355)
T cd07874 17 KRYQNLKPIG--------SGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ 88 (355)
T ss_pred hceeEEEEee--------ecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecc
Confidence 4599999999 99999999999999999999999876 22345677899999999999999999988653
Q ss_pred C----CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 130 S----KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 130 ~----~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
. ....|+||||+. +|.+.+. ..++...+..++.||+.||.||| +.|++||||||+||+++.+|.+||+
T Consensus 89 ~~~~~~~~~~lv~e~~~~~l~~~~~------~~l~~~~~~~~~~qi~~aL~~LH-~~givHrDikp~Nill~~~~~~kl~ 161 (355)
T cd07874 89 KSLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSDCTLKIL 161 (355)
T ss_pred ccccccceeEEEhhhhcccHHHHHh------hcCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCChHHEEECCCCCEEEe
Confidence 1 135899999999 6776663 35788899999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-----------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS----------- 273 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~----------- 273 (852)
|||+++..... .......+|+.|+|||++.+..++.++|+|||||++|+|++|..||.+.....
T Consensus 162 Dfg~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (355)
T cd07874 162 DFGLARTAGTS-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 236 (355)
T ss_pred eCcccccCCCc-----cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 99998754321 11123467889999999988888999999999999999999999986432100
Q ss_pred ------------------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCC
Q psy3914 274 ------------------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPG 311 (852)
Q Consensus 274 ------------------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~ 311 (852)
.....+..+.+++.+||..||.+|||+.++++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h----- 311 (355)
T cd07874 237 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH----- 311 (355)
T ss_pred CCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC-----
Confidence 001134567899999999999999999999998
Q ss_pred CCCc
Q psy3914 312 GYFK 315 (852)
Q Consensus 312 ~fF~ 315 (852)
+||+
T Consensus 312 p~~~ 315 (355)
T cd07874 312 PYIN 315 (355)
T ss_pred cchh
Confidence 7875
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=327.45 Aligned_cols=244 Identities=15% Similarity=0.184 Sum_probs=204.8
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
...+|++.+.|| .|+||+||.|+++.+|+.||||+++.. .....+.+|+..+..++|+||+++++.+.
T Consensus 30 ~~~rY~i~~~LG--------~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~ 101 (496)
T PTZ00283 30 QAKKYWISRVLG--------SGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFA 101 (496)
T ss_pred cCCCEEEEEEEe--------cCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeeccee
Confidence 345799999999 999999999999999999999999762 23456788999999999999999988775
Q ss_pred cCC------CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC
Q psy3914 128 SPS------KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG 199 (852)
Q Consensus 128 ~~~------~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g 199 (852)
... ...+++||||+. +|.++|.........+++..+..++.||+.||.||| +.+|+||||||+||+++.+|
T Consensus 102 ~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH-~~~IiHrDLKP~NILl~~~~ 180 (496)
T PTZ00283 102 KKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH-SKHMIHRDIKSANILLCSNG 180 (496)
T ss_pred cccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH-hCCEecCCCCHHHEEEeCCC
Confidence 431 124789999998 799998655555567999999999999999999999 89999999999999999999
Q ss_pred cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-------
Q psy3914 200 EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------- 272 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------- 272 (852)
.+||+|||+++.+..... ........||+.|+|||++.+..++.++|||||||++|||++|..||.+....
T Consensus 181 ~vkL~DFGls~~~~~~~~--~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~ 258 (496)
T PTZ00283 181 LVKLGDFGFSKMYAATVS--DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTL 258 (496)
T ss_pred CEEEEecccCeecccccc--ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 999999999875432111 11123456899999999998888999999999999999999999999653221
Q ss_pred -----cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 273 -----SNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 273 -----~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.....+++.+.+++.+||+.+|.+||++.+++.|
T Consensus 259 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 259 AGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1235788999999999999999999999999987
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=313.54 Aligned_cols=230 Identities=16% Similarity=0.251 Sum_probs=192.8
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|++|.||.|+++.+++.|++|++.+ ......+.+|+.++..+ +||||+++++++.+. +.+|+||||+. +
T Consensus 5 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~--~~~~lv~E~~~~~~ 82 (329)
T cd05618 5 RGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE--SRLFFVIEYVNGGD 82 (329)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC--CEEEEEEeCCCCCC
Confidence 89999999999999999999999986 22344577888888776 799999999999987 89999999998 6
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|..++. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++..... .....
T Consensus 83 L~~~~~----~~~~l~~~~~~~i~~qi~~~l~~lH-~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~----~~~~~ 153 (329)
T cd05618 83 LMFHMQ----RQRKLPEEHARFYSAEISLALNYLH-ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR----PGDTT 153 (329)
T ss_pred HHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccC----CCCcc
Confidence 877663 2357899999999999999999999 89999999999999999999999999999863211 11122
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCC--------------------ccccCcCCCChhHH
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNR--------------------KSLSNIDNIPENLK 283 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~--------------------~~l~~~~~ip~~L~ 283 (852)
....||+.|+|||++.+..++.++|+|||||++|+|++|..||... .....+..++..+.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 233 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 233 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHH
Confidence 2456889999999998888899999999999999999999998421 01112356778899
Q ss_pred HHHHHhccCCCCCCCC------HHHHHHhhcCCCCCCcch
Q psy3914 284 RVYLELISERPNQRPN------PADFIMRNRKPGGYFKND 317 (852)
Q Consensus 284 ~li~~lL~~nP~~Rps------~~elL~~l~~~~~fF~n~ 317 (852)
+++++||+.||.+||+ +.++++| +||.+.
T Consensus 234 ~ll~~~L~~dP~~R~~~~~~~~~~~i~~h-----p~f~~~ 268 (329)
T cd05618 234 SVLKSFLNKDPKERLGCHPQTGFADIQGH-----PFFRNV 268 (329)
T ss_pred HHHHHHhcCCHHHcCCCCCCCCHHHHhcC-----CCCCCC
Confidence 9999999999999998 4788887 999764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG0589|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=319.87 Aligned_cols=235 Identities=17% Similarity=0.211 Sum_probs=208.2
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
.|.+++.+| .|+||.++..+++.++..|++|.+.. +.....+.+|+.++++++||||+.|.+.|+.+
T Consensus 5 ~Ye~~~~iG--------~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~- 75 (426)
T KOG0589|consen 5 NYEVLRQVG--------RGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEED- 75 (426)
T ss_pred hhhhhhhcC--------ccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcC-
Confidence 599999999 99999999999999999999999987 34455889999999999999999999999987
Q ss_pred CCe-EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 131 KSL-VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 131 ~~~-~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
++ +||||+||. +|.+.+.+.. ...+++..+.+++.||+.||.||| +.+|+|||||+.|||++.++.+||+|||
T Consensus 76 -~~~l~Ivm~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH-~~~iLHRDlK~~Nifltk~~~VkLgDfG 151 (426)
T KOG0589|consen 76 -GQLLCIVMEYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLH-ENRVLHRDLKCANIFLTKDKKVKLGDFG 151 (426)
T ss_pred -CceEEEEEeecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHH-hhhhhcccchhhhhhccccCceeecchh
Confidence 66 999999999 7999885432 467899999999999999999999 9999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc------------Cc
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------NI 275 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------~~ 275 (852)
+++.++.. .....+..||+.|++||++.+..|+.++|||||||++|||++-+++|.+.+... ..
T Consensus 152 laK~l~~~----~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp 227 (426)
T KOG0589|consen 152 LAKILNPE----DSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP 227 (426)
T ss_pred hhhhcCCc----hhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC
Confidence 99865432 234456889999999999999999999999999999999999999996543221 23
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
...+.+++.+++.||..+|..||++.++|.+
T Consensus 228 ~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 228 SMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 4567789999999999999999999999986
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=309.31 Aligned_cols=230 Identities=17% Similarity=0.260 Sum_probs=191.0
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHh-CCCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKT-LRHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~-LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|++|.||+|+++.+++.|+||++.. ....+....|..++.. ++||||++++++++.. ..+|+||||+. +
T Consensus 5 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~--~~~~lv~e~~~gg~ 82 (316)
T cd05592 5 KGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTK--EHLFFVMEYLNGGD 82 (316)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcC--CEEEEEEcCCCCCc
Confidence 89999999999999999999999976 2233445566666664 4799999999999987 89999999997 6
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|..++.. ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++...... ....
T Consensus 83 L~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH-~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~----~~~~ 153 (316)
T cd05592 83 LMFHIQS----SGRFDEARARFYAAEIICGLQFLH-KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG----EGKA 153 (316)
T ss_pred HHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC----CCcc
Confidence 8777732 357899999999999999999999 899999999999999999999999999998643211 1122
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----------cCcCCCChhHHHHHHHhccC
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-----------SNIDNIPENLKRVYLELISE 292 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-----------~~~~~ip~~L~~li~~lL~~ 292 (852)
....||+.|+|||++.+..++.++|+|||||++|+|++|..||.+.... .....+++.+.+++.+||..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l~~ 233 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFER 233 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccC
Confidence 3456899999999998778899999999999999999999999654321 12345788999999999999
Q ss_pred CCCCCCCHH-HHHHhhcCCCCCCcch
Q psy3914 293 RPNQRPNPA-DFIMRNRKPGGYFKND 317 (852)
Q Consensus 293 nP~~Rps~~-elL~~l~~~~~fF~n~ 317 (852)
+|.+||++. ++++| +||...
T Consensus 234 ~P~~R~~~~~~l~~h-----~~~~~~ 254 (316)
T cd05592 234 DPTKRLGVDGDIRQH-----PFFRGI 254 (316)
T ss_pred CHHHcCCChHHHHcC-----cccCCC
Confidence 999999875 66676 888753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=296.95 Aligned_cols=243 Identities=14% Similarity=0.232 Sum_probs=204.6
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.|++++.|| .|++++||+|....++..|+||++.. ......+.+|++.|+.++||||+++++.+...
T Consensus 2 ~y~~~~~lg--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 71 (267)
T cd06610 2 DYELIEVIG--------VGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVG-- 71 (267)
T ss_pred cceeeeeec--------CCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeC--
Confidence 589999999 89999999999999999999999976 22456789999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
...|+|||++. +|.+++... .....+++..+..++.||+.||.||| +.+++||||+|+||++++++.++|+|||++
T Consensus 72 ~~~~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~ql~~al~~lh-~~~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 72 DELWLVMPYLSGGSLLDIMKSS-YPRGGLDEAIIATVLKEVLKGLEYLH-SNGQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred CEEEEEEeccCCCcHHHHHHHh-cccCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 89999999997 788888432 22356899999999999999999999 999999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCC-CCCcchhHHhHHHHHHHHHhCCCCCCCCcccc---------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSH-VTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--------------- 273 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--------------- 273 (852)
..+...............++..|++||++... .++.++|+|||||++|+|++|..||.+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 229 (267)
T cd06610 150 ASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLET 229 (267)
T ss_pred HHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCC
Confidence 76543322211122335678899999998544 78889999999999999999999985432211
Q ss_pred --CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 274 --NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 274 --~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
....++..+.+++.+||..||..||++.+++.| +||
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~-----p~~ 267 (267)
T cd06610 230 GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH-----KFF 267 (267)
T ss_pred ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC-----CCC
Confidence 113678899999999999999999999999997 887
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-34 Score=318.35 Aligned_cols=238 Identities=14% Similarity=0.170 Sum_probs=197.5
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|++|.||.|.++.+++.|+||++.. ......+.+|+.+++.++||||+++++++...
T Consensus 24 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~ 95 (364)
T cd07875 24 KRYQNLKPIG--------SGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQ 95 (364)
T ss_pred cceeEEEEee--------cCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccc
Confidence 4699999999 99999999999999999999999875 23345678899999999999999999987643
Q ss_pred C----CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 130 S----KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 130 ~----~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
. ...+|+||||+. +|...+. ..++...+..++.||+.||.||| +.+++||||||+||+++.+|.+||+
T Consensus 96 ~~~~~~~~~~lv~e~~~~~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~kL~ 168 (364)
T cd07875 96 KSLEEFQDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSDCTLKIL 168 (364)
T ss_pred ccccccCeEEEEEeCCCCCHHHHHH------hcCCHHHHHHHHHHHHHHHHHHh-hCCeecCCCCHHHEEECCCCcEEEE
Confidence 1 146899999999 6777663 34778899999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC----------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN---------- 274 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~---------- 274 (852)
|||+++...... ......+|..|+|||++.+..++.++|||||||++|+|++|..||.+......
T Consensus 169 DfG~a~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 243 (364)
T cd07875 169 DFGLARTAGTSF-----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243 (364)
T ss_pred eCCCccccCCCC-----cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 999987543211 11234678899999999888889999999999999999999999854321100
Q ss_pred -------------------------------------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCC
Q psy3914 275 -------------------------------------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPG 311 (852)
Q Consensus 275 -------------------------------------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~ 311 (852)
....+..+++++.+||..||.+|||+.++++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h----- 318 (364)
T cd07875 244 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH----- 318 (364)
T ss_pred CCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC-----
Confidence 00123568899999999999999999999998
Q ss_pred CCCcc
Q psy3914 312 GYFKN 316 (852)
Q Consensus 312 ~fF~n 316 (852)
+||..
T Consensus 319 p~~~~ 323 (364)
T cd07875 319 PYINV 323 (364)
T ss_pred ccccc
Confidence 88853
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-34 Score=313.00 Aligned_cols=230 Identities=15% Similarity=0.229 Sum_probs=193.7
Q ss_pred cCCceEEEEEEE---cCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--
Q psy3914 72 KHTFWKFHGGKK---KGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE-- 142 (852)
Q Consensus 72 ~Gs~~~Vy~a~~---k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~-- 142 (852)
.|+++.||.+++ +.+|+.|+||++.. ......+.+|+++|++++||||+++++++++. ..+|+||||+.
T Consensus 6 ~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~ 83 (318)
T cd05582 6 QGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTE--GKLYLILDFLRGG 83 (318)
T ss_pred eCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcC--CEEEEEEcCCCCC
Confidence 899999999876 45789999999986 22344577899999999999999999999987 89999999997
Q ss_pred cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcc
Q psy3914 143 PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKR 222 (852)
Q Consensus 143 ~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~ 222 (852)
+|.+++.+ ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++...... ...
T Consensus 84 ~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~----~~~ 154 (318)
T cd05582 84 DLFTRLSK----EVMFTEEDVKFYLAELALALDHLH-SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH----EKK 154 (318)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC----CCc
Confidence 68877732 356899999999999999999999 899999999999999999999999999998643221 111
Q ss_pred cccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcCCCChhHHHHHHHhcc
Q psy3914 223 YSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNIDNIPENLKRVYLELIS 291 (852)
Q Consensus 223 ~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~~ip~~L~~li~~lL~ 291 (852)
.....|++.|+|||++.+..++.++|||||||++|+|++|..||.+... ...+..+++.+.+++++||+
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~ 234 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFK 234 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhh
Confidence 2235688899999999777788999999999999999999999965422 12245678899999999999
Q ss_pred CCCCCCCC-----HHHHHHhhcCCCCCCcch
Q psy3914 292 ERPNQRPN-----PADFIMRNRKPGGYFKND 317 (852)
Q Consensus 292 ~nP~~Rps-----~~elL~~l~~~~~fF~n~ 317 (852)
.||.+||+ +.+++.| +||.+.
T Consensus 235 ~~P~~R~~a~~~~~~~~~~~-----~~~~~~ 260 (318)
T cd05582 235 RNPANRLGAGPDGVEEIKRH-----PFFSTI 260 (318)
T ss_pred cCHhHcCCCCCCCHHHHhCC-----CCcCCC
Confidence 99999999 6667776 899864
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=304.59 Aligned_cols=241 Identities=15% Similarity=0.229 Sum_probs=191.6
Q ss_pred eccccCCCCCCcccCCceEEEEEEEcC--CCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEE
Q psy3914 59 GEPAVSFSGCFTQKHTFWKFHGGKKKG--SNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYL 136 (852)
Q Consensus 59 ~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~--~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yI 136 (852)
+.+|| .|++|.||+|+.+. ++..|++|.+........+.+|+.+|+.++||||+++++++.......+|+
T Consensus 6 g~~lG--------~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~l 77 (317)
T cd07867 6 GCKVG--------RGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWL 77 (317)
T ss_pred ceEec--------cCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEE
Confidence 56788 89999999999764 568999999887555567889999999999999999999986544478999
Q ss_pred EEeecc-cHHHHHHhhh-----hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE----ccCCcEEEccc
Q psy3914 137 AVEYVE-PIFYHLDNTL-----KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI----NSCGEWKLGGL 206 (852)
Q Consensus 137 VtE~v~-~L~~~L~~~~-----~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV----~~~g~~KL~DF 206 (852)
|+||+. +|.+++.... .....+++..+..++.||+.||.||| +.+++||||||+||++ +.+|.+||+||
T Consensus 78 v~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH-~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 78 LFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH-ANWVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred EEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH-hCCEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 999998 7877774211 12235888999999999999999999 8999999999999999 45688999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-c-----------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-S----------- 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-~----------- 273 (852)
|+++...... ..........+|+.|+|||++.+ ..++.++|||||||++|||++|.+||...... .
T Consensus 157 G~a~~~~~~~-~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~ 235 (317)
T cd07867 157 GFARLFNSPL-KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLD 235 (317)
T ss_pred cceeccCCCc-ccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHH
Confidence 9987553321 11222234567889999999854 56788999999999999999999998532100 0
Q ss_pred ---------------C-------------------------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 274 ---------------N-------------------------------IDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 274 ---------------~-------------------------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
. ....+..+.+++.+||..||.+|||+.++++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h- 314 (317)
T cd07867 236 RIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD- 314 (317)
T ss_pred HHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC-
Confidence 0 00123457789999999999999999999997
Q ss_pred cCCCCCC
Q psy3914 308 RKPGGYF 314 (852)
Q Consensus 308 ~~~~~fF 314 (852)
+||
T Consensus 315 ----p~f 317 (317)
T cd07867 315 ----PYF 317 (317)
T ss_pred ----CCC
Confidence 887
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=316.99 Aligned_cols=242 Identities=17% Similarity=0.243 Sum_probs=202.1
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
....|++.+.|| .|+++.||.|+++.+++.|++|++.+ ......+.+|+.+++.++||||+++++.+
T Consensus 41 ~~~~y~~~~~lG--------~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~ 112 (370)
T cd05621 41 KAEDYDVVKVIG--------RGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF 112 (370)
T ss_pred CHHHCeEEEEEE--------ecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 345699999999 99999999999999999999999975 23345678999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
+++ ..+|+||||+. +|.+++.. ..+++..+..++.||+.||.||| +.+|+||||||+||+++.+|.+||+
T Consensus 113 ~~~--~~~~lv~Ey~~gg~L~~~l~~-----~~~~~~~~~~~~~qil~aL~~LH-~~~IvHrDLKp~NILl~~~~~~kL~ 184 (370)
T cd05621 113 QDD--KYLYMVMEYMPGGDLVNLMSN-----YDVPEKWAKFYTAEVVLALDAIH-SMGLIHRDVKPDNMLLDKHGHLKLA 184 (370)
T ss_pred EcC--CEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCCHHHEEECCCCCEEEE
Confidence 988 89999999997 78888842 35789999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCC----CCCcchhHHhHHHHHHHHHhCCCCCCCCcc---------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSH----VTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------- 271 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~----~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------- 271 (852)
|||++....... ........||+.|+|||++.+. .++.++|+|||||++|+|++|..||.+...
T Consensus 185 DFG~a~~~~~~~---~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~ 261 (370)
T cd05621 185 DFGTCMKMDETG---MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMD 261 (370)
T ss_pred ecccceecccCC---ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 999987543211 1122345789999999998432 377899999999999999999999965421
Q ss_pred ----ccCc--CCCChhHHHHHHHhccCCCCC--CCCHHHHHHhhcCCCCCCcch
Q psy3914 272 ----LSNI--DNIPENLKRVYLELISERPNQ--RPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 272 ----l~~~--~~ip~~L~~li~~lL~~nP~~--Rps~~elL~~l~~~~~fF~n~ 317 (852)
+..+ ..++..+.+++++||..++.+ |+++.++++| +||++.
T Consensus 262 ~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h-----p~~~~~ 310 (370)
T cd05621 262 HKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH-----PFFKND 310 (370)
T ss_pred CCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC-----cccCCC
Confidence 1111 246888999999999866554 8999999998 999763
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >KOG0610|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=303.61 Aligned_cols=248 Identities=15% Similarity=0.195 Sum_probs=210.7
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.+| .|..|+||++..+.++..+|+|++++ ......+..|-.+|+.+.||.+..+|..|+++
T Consensus 78 ~f~llk~LG--------~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~ 149 (459)
T KOG0610|consen 78 HFRLLKRLG--------CGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETD 149 (459)
T ss_pred HHHHHHHcC--------CCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecc
Confidence 477889999 89999999999999999999999998 44556788888999999999999999999998
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
.+.|+|||||. +|..++++ .....+++..++.++..|+.||.||| -.|||+|||||+||||.++|++-|+||+
T Consensus 150 --~~~cl~meyCpGGdL~~Lrqk--Qp~~~fse~~aRFYaAEvl~ALEYLH-mlGivYRDLKPENILvredGHIMLsDFD 224 (459)
T KOG0610|consen 150 --KYSCLVMEYCPGGDLHSLRQK--QPGKRFSESAARFYAAEVLLALEYLH-MLGIVYRDLKPENILVREDGHIMLSDFD 224 (459)
T ss_pred --ceeEEEEecCCCccHHHHHhh--CCCCccchhhHHHHHHHHHHHHHHHH-hhceeeccCCcceeEEecCCcEEeeecc
Confidence 99999999999 78887743 45578999999999999999999999 9999999999999999999999999999
Q ss_pred hhhcccc------c-c------------------------C-C-------------------C-CcccccccCCCcccCC
Q psy3914 208 YMEKISE------A-S------------------------C-I-------------------P-MKRYSRYEDQSTYQIP 235 (852)
Q Consensus 208 ~a~~~~~------~-~------------------------~-~-------------------~-~~~~~~~~gt~~Y~AP 235 (852)
++....- . . . . + ..+...++||-.|.||
T Consensus 225 LS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAP 304 (459)
T KOG0610|consen 225 LSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAP 304 (459)
T ss_pred ccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccc
Confidence 8753211 0 0 0 0 0 0112246799999999
Q ss_pred ccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccCc-------------CCCChhHHHHHHHhccCCCCCCCC---
Q psy3914 236 ENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI-------------DNIPENLKRVYLELISERPNQRPN--- 299 (852)
Q Consensus 236 E~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~~-------------~~ip~~L~~li~~lL~~nP~~Rps--- 299 (852)
|++.+...+.++|.|.||+++|||+.|..||.|...-..+ ..++..++++|+++|..||++|..
T Consensus 305 EvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~r 384 (459)
T KOG0610|consen 305 EVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKR 384 (459)
T ss_pred eeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhcccc
Confidence 9999999999999999999999999999999876543221 255688999999999999999998
Q ss_pred -HHHHHHhhcCCCCCCcchHHH
Q psy3914 300 -PADFIMRNRKPGGYFKNDLID 320 (852)
Q Consensus 300 -~~elL~~l~~~~~fF~n~lv~ 320 (852)
+.+|-+| +||+..-..
T Consensus 385 GA~eIK~H-----pFF~gVnWa 401 (459)
T KOG0610|consen 385 GAAEIKRH-----PFFEGVNWA 401 (459)
T ss_pred chHHhhcC-----ccccCCChh
Confidence 8888887 899875433
|
|
| >KOG0032|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-33 Score=311.49 Aligned_cols=239 Identities=21% Similarity=0.267 Sum_probs=211.1
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCC-CCCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLR-HPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~ 125 (852)
....|++++.+| .|.|+.||.++.+.+|+.+|+|++.+ ......+.+|+.+|++|. ||||+.++++
T Consensus 33 ~~~~Y~l~~~lG--------~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~ 104 (382)
T KOG0032|consen 33 IKEKYELGRELG--------RGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDA 104 (382)
T ss_pred ccccEEehhhhC--------CCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 344699999999 99999999999999999999999988 223478999999999998 9999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC----C
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC----G 199 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~----g 199 (852)
|++. ..+|+|||+|. .|.+.+.+. .+++..+..++.||+.+++||| ..|++||||||+|+|+... +
T Consensus 105 ~e~~--~~~~lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH-~~gvvHrDlKpEN~L~~~~~~~~~ 176 (382)
T KOG0032|consen 105 FEDP--DSVYLVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLH-SLGVVHRDLKPENLLLASKDEGSG 176 (382)
T ss_pred EEcC--CeEEEEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHH-hCCceeccCCHHHeeeccccCCCC
Confidence 9998 89999999999 688887443 3999999999999999999999 8999999999999999753 4
Q ss_pred cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------
Q psy3914 200 EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-------- 271 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-------- 271 (852)
.+|++|||++..... .......+||+.|+|||++....|+..+||||+|+++|.|+.|..||.+...
T Consensus 177 ~ik~~DFGla~~~~~-----~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~ 251 (382)
T KOG0032|consen 177 RIKLIDFGLAKFIKP-----GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAIL 251 (382)
T ss_pred cEEEeeCCCceEccC-----CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHH
Confidence 799999999875432 3345568899999999999888999999999999999999999999976542
Q ss_pred -------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 272 -------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 272 -------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
......++..+.+++++||..||.+|+++.++|+| ||+.+
T Consensus 252 ~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H-----pWi~~ 298 (382)
T KOG0032|consen 252 RGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH-----PWIKS 298 (382)
T ss_pred cCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC-----ccccC
Confidence 12356889999999999999999999999999998 78654
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=301.92 Aligned_cols=240 Identities=16% Similarity=0.211 Sum_probs=203.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.|| .|++|.||.+....+++.|+||++... .....+.+|+.+++.++||||+++++.+++.
T Consensus 1 ~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 72 (285)
T cd05605 1 TFRHYRVLG--------KGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK 72 (285)
T ss_pred CceEEEEEe--------cCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCC
Confidence 388999999 999999999999999999999998751 2234567899999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
..+|+||||+. +|..++... ....+++..+..++.||+.||.||| +.+++||||+|+||++++++.++|+|||
T Consensus 73 --~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~dlkp~Nil~~~~~~~~l~Dfg 147 (285)
T cd05605 73 --DALCLVLTLMNGGDLKFHIYNM--GNPGFDEERAVFYAAEITCGLEDLH-RERIVYRDLKPENILLDDYGHIRISDLG 147 (285)
T ss_pred --CeEEEEEeccCCCcHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHH-HCCcEecCCCHHHEEECCCCCEEEeeCC
Confidence 89999999997 688777432 2346899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------- 272 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------- 272 (852)
++....... ......|+..|+|||++.+..++.++|+|||||++|+|++|..||.+....
T Consensus 148 ~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 222 (285)
T cd05605 148 LAVEIPEGE-----TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQE 222 (285)
T ss_pred CceecCCCC-----ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhccc
Confidence 986542211 112346788999999997778889999999999999999999999653221
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCC-----CHHHHHHhhcCCCCCCcch
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRP-----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n~ 317 (852)
.....++..+.+++.+||..||.+|| ++.++++| +||...
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~-----~~~~~~ 267 (285)
T cd05605 223 EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH-----PFFRTA 267 (285)
T ss_pred ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC-----cCccCC
Confidence 12346788999999999999999999 89999997 899764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=326.31 Aligned_cols=239 Identities=14% Similarity=0.195 Sum_probs=193.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCC------CcceEeee
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHP------SILTFLDS 125 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHP------nIlk~~d~ 125 (852)
..+|++.+.|| .|+||+||+|.+..+++.||||+++. .........|+++++.++|. +|++++++
T Consensus 128 ~~~y~i~~~lG--------~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~ 199 (467)
T PTZ00284 128 TQRFKILSLLG--------EGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRY 199 (467)
T ss_pred CCcEEEEEEEE--------eccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEE
Confidence 45699999999 99999999999999999999999975 23344567788888877654 58889998
Q ss_pred EEcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC-----
Q psy3914 126 VESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG----- 199 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g----- 199 (852)
+..+ ..++|||||++. +|.+++.+ .+.+++..+..++.||+.||.|||..+|||||||||+||+++.++
T Consensus 200 ~~~~-~~~~~iv~~~~g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 200 FQNE-TGHMCIVMPKYGPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred EEcC-CceEEEEEeccCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccc
Confidence 8764 367999999988 68877743 357899999999999999999999437999999999999998766
Q ss_pred -----------cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCC
Q psy3914 200 -----------EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTN 268 (852)
Q Consensus 200 -----------~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~ 268 (852)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|.+||.+
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~-------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDER-------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred ccccccCCCCceEEECCCCccccCc-------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 49999999875321 112245788999999999888899999999999999999999999965
Q ss_pred CccccC-------cCCC----------------------------------------------ChhHHHHHHHhccCCCC
Q psy3914 269 RKSLSN-------IDNI----------------------------------------------PENLKRVYLELISERPN 295 (852)
Q Consensus 269 ~~~l~~-------~~~i----------------------------------------------p~~L~~li~~lL~~nP~ 295 (852)
...... +..+ .+.+.+||.+||..||.
T Consensus 348 ~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~ 427 (467)
T PTZ00284 348 HDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQ 427 (467)
T ss_pred CChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChh
Confidence 432110 0000 23466899999999999
Q ss_pred CCCCHHHHHHhhcCCCCCCcc
Q psy3914 296 QRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 296 ~Rps~~elL~~l~~~~~fF~n 316 (852)
+|||+.++|+| +||..
T Consensus 428 ~R~ta~e~L~H-----p~~~~ 443 (467)
T PTZ00284 428 KRLNARQMTTH-----PYVLK 443 (467)
T ss_pred hCCCHHHHhcC-----ccccc
Confidence 99999999998 88865
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=310.09 Aligned_cols=230 Identities=18% Similarity=0.257 Sum_probs=188.9
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHH-HHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYV-KKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~-~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|++++||+|+++.+++.|++|++... .....+.+|. .+++.++||||++++++++.. +.+|+||||+. +
T Consensus 5 ~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~ 82 (325)
T cd05602 5 KGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA--DKLYFVLDYINGGE 82 (325)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcC--CeEEEEEeCCCCCc
Confidence 899999999999999999999999861 1222333333 457889999999999999987 89999999998 6
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|..++.+ ...+.+..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|||++...... ....
T Consensus 83 L~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH-~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~----~~~~ 153 (325)
T cd05602 83 LFYHLQR----ERCFLEPRARFYAAEIASALGYLH-SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH----NGTT 153 (325)
T ss_pred HHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC----CCCc
Confidence 8877742 356888999999999999999999 899999999999999999999999999998643211 1122
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcCCCChhHHHHHHHhccC
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNIDNIPENLKRVYLELISE 292 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~~ip~~L~~li~~lL~~ 292 (852)
....||+.|+|||++.+..++.++|||||||++|+|++|..||.+... ......+++.+.+++.+||..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~ 233 (325)
T cd05602 154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQK 233 (325)
T ss_pred ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHccc
Confidence 345688999999999888889999999999999999999999965422 222457899999999999999
Q ss_pred CCCCCCCHH----HHHHhhcCCCCCCcch
Q psy3914 293 RPNQRPNPA----DFIMRNRKPGGYFKND 317 (852)
Q Consensus 293 nP~~Rps~~----elL~~l~~~~~fF~n~ 317 (852)
+|.+|+++. ++++| .||.+.
T Consensus 234 ~p~~R~~~~~~~~~i~~~-----~~~~~~ 257 (325)
T cd05602 234 DRTKRLGAKDDFMEIKNH-----IFFSPI 257 (325)
T ss_pred CHHHCCCCCCCHHHHhcC-----cccCCC
Confidence 999999876 45554 677653
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >KOG1989|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=328.33 Aligned_cols=245 Identities=14% Similarity=0.192 Sum_probs=201.1
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCC-CCCcceEeee-EE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLR-HPSILTFLDS-VE 127 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~-~e 127 (852)
-.++++|.+.|. +|||+.||.|.....|..||+|.+-. +.....+++|+.+||.|+ |||||.|+|. ..
T Consensus 35 g~~~v~V~~vLA--------EGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~ 106 (738)
T KOG1989|consen 35 GSHRVTVEKVLA--------EGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAI 106 (738)
T ss_pred CCEEEEEEEEEc--------cCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccc
Confidence 345678888888 99999999999998889999997655 567788999999999998 9999999993 32
Q ss_pred cC-C---CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC--ceecccCCCCEEEccCC
Q psy3914 128 SP-S---KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDAD--LRHNHVNHTSIFINSCG 199 (852)
Q Consensus 128 ~~-~---~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~--ivH~DIkp~NIlV~~~g 199 (852)
.. + .-.++|.||||. .|-++|.++.. ..|++.+|..|++|+++|+.+|| .+. |||||||.+|||++.+|
T Consensus 107 ~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq--~~lte~eVLkIf~dv~~AVa~mH-~~~pPiIHRDLKiENvLls~~g 183 (738)
T KOG1989|consen 107 NRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQ--TRLTEDEVLKIFYDVCEAVAAMH-YLKPPIIHRDLKIENVLLSADG 183 (738)
T ss_pred cccCCCceeEEEeehhhccCCcHHHHHHHHHh--ccCChHHHHHHHHHHHHHHHHHh-cCCCccchhhhhhhheEEcCCC
Confidence 21 1 135789999999 79999976655 34999999999999999999999 887 99999999999999999
Q ss_pred cEEEcccchhhccccccCCC--Cc---ccccccCCCcccCCccc---cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc
Q psy3914 200 EWKLGGLEYMEKISEASCIP--MK---RYSRYEDQSTYQIPENS---LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS 271 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~--~~---~~~~~~gt~~Y~APE~~---~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~ 271 (852)
.+||||||.++..--..... .. ..-...-|+.|++||++ .+...+.++|||+|||+||-|+....||.+...
T Consensus 184 ~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~ 263 (738)
T KOG1989|consen 184 NYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK 263 (738)
T ss_pred CEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc
Confidence 99999999987321111000 00 00012357899999997 788889999999999999999999999976544
Q ss_pred ccC---------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 LSN---------IDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 l~~---------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+.. ..+++..|.+||+.||.+||..||++.+++.++
T Consensus 264 laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 264 LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI 308 (738)
T ss_pred eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 433 246778899999999999999999999998863
|
|
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=314.70 Aligned_cols=236 Identities=14% Similarity=0.230 Sum_probs=196.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|++++||.|.+..++..|+||++... .....+.+|+++|+.++||||+++++++....
T Consensus 16 ~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07878 16 RYQNLTPVG--------SGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPAT 87 (343)
T ss_pred hhhhheecc--------cCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccc
Confidence 499999999 899999999999999999999998762 23345778999999999999999999886431
Q ss_pred ----CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 131 ----KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 131 ----~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
...+|+++|++. +|..++. ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivHrdikp~Nil~~~~~~~kl~D 161 (343)
T cd07878 88 SIENFNEVYLVTNLMGADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYIH-SAGIIHRDLKPSNVAVNEDCELRILD 161 (343)
T ss_pred cccccCcEEEEeecCCCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeecccCChhhEEECCCCCEEEcC
Confidence 145799999998 7877663 256899999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-----------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS----------- 273 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~----------- 273 (852)
||++...... .....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.....
T Consensus 162 fg~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 234 (343)
T cd07878 162 FGLARQADDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGT 234 (343)
T ss_pred CccceecCCC-------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCC
Confidence 9998754321 123457889999999854 568889999999999999999999985432110
Q ss_pred -------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 -------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 -------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....++.+.+++.+||..||.+|||+.+++.| +||..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h-----p~~~~ 303 (343)
T cd07878 235 PSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH-----PYFSQ 303 (343)
T ss_pred CCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC-----cchhc
Confidence 012345568899999999999999999999997 88854
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >KOG0197|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=314.15 Aligned_cols=235 Identities=16% Similarity=0.228 Sum_probs=199.2
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeE
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLV 134 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~ 134 (852)
+++.+.|| .|.||.||.|+.+ ....|+||.+.. ....+.+.+|+++|++|+|++|+++++++..+ ..+
T Consensus 208 l~l~~~LG--------~G~FG~V~~g~~~-~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~--~pi 276 (468)
T KOG0197|consen 208 LKLIRELG--------SGQFGEVWLGKWN-GSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQ--EPI 276 (468)
T ss_pred HHHHHHhc--------CCccceEEEEEEc-CCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecC--Cce
Confidence 56678999 9999999999995 345899999887 45557788999999999999999999999987 789
Q ss_pred EEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhcc
Q psy3914 135 YLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKI 212 (852)
Q Consensus 135 yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~ 212 (852)
||||||+. +|.++|+. .....+.......++.||++|++||+ +.++|||||-..||||++++.+||+|||+++.+
T Consensus 277 yIVtE~m~~GsLl~yLr~--~~~~~l~~~~Ll~~a~qIaeGM~YLe-s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~ 353 (468)
T KOG0197|consen 277 YIVTEYMPKGSLLDYLRT--REGGLLNLPQLLDFAAQIAEGMAYLE-SKNYIHRDLAARNILVDEDLVVKISDFGLARLI 353 (468)
T ss_pred EEEEEecccCcHHHHhhh--cCCCccchHHHHHHHHHHHHHHHHHH-hCCccchhhhhhheeeccCceEEEccccccccc
Confidence 99999999 79999954 34567888999999999999999999 999999999999999999999999999999954
Q ss_pred ccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCCCC
Q psy3914 213 SEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDNIP 279 (852)
Q Consensus 213 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~ip 279 (852)
+++...... ...-...|.|||.+....++.++||||||++|||||| |+.|+.+... +..+..+|
T Consensus 354 ~d~~Y~~~~---~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP 430 (468)
T KOG0197|consen 354 GDDEYTASE---GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCP 430 (468)
T ss_pred CCCceeecC---CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCC
Confidence 432211111 1111238999999988889999999999999999999 7888765432 34578999
Q ss_pred hhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 280 ENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 280 ~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+.+.+++..||..+|+.|||+..+...+
T Consensus 431 ~~vY~lM~~CW~~~P~~RPtF~~L~~~l 458 (468)
T KOG0197|consen 431 DEVYELMKSCWHEDPEDRPTFETLREVL 458 (468)
T ss_pred HHHHHHHHHHhhCCcccCCCHHHHHHHH
Confidence 9999999999999999999999877654
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=308.73 Aligned_cols=229 Identities=17% Similarity=0.251 Sum_probs=188.0
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHH-HHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYV-KKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~-~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|+++.||+|+++.+|+.|+||++.+ ......+.+|. .+++.++||||+++++.+++. +.+|+||||+. +
T Consensus 5 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~--~~~~lv~e~~~~~~ 82 (321)
T cd05603 5 KGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTA--EKLYFVLDYVNGGE 82 (321)
T ss_pred eCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcC--CEEEEEEcCCCCCC
Confidence 89999999999999999999999976 12223344444 467889999999999999987 89999999998 6
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|...+. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++..... +....
T Consensus 83 L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~lH-~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~----~~~~~ 153 (321)
T cd05603 83 LFFHLQ----RERCFLEPRARFYAAEVASAIGYLH-SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVE----PEETT 153 (321)
T ss_pred HHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCC----CCCcc
Confidence 877663 2357889999999999999999999 89999999999999999999999999999863211 11122
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcCCCChhHHHHHHHhccC
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNIDNIPENLKRVYLELISE 292 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~~ip~~L~~li~~lL~~ 292 (852)
....|++.|+|||++.+..++.++|+|||||++|+|++|..||.+.+. .......+..+.+++.+||..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~ 233 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHK 233 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccC
Confidence 345688899999999877888999999999999999999999965421 122346678899999999999
Q ss_pred CCCCCCCHH----HHHHhhcCCCCCCcc
Q psy3914 293 RPNQRPNPA----DFIMRNRKPGGYFKN 316 (852)
Q Consensus 293 nP~~Rps~~----elL~~l~~~~~fF~n 316 (852)
+|.+|++.. ++++| +||.+
T Consensus 234 ~p~~R~~~~~~~~~~~~~-----~~~~~ 256 (321)
T cd05603 234 DQRRRLGAKADFLEIKNH-----VFFSP 256 (321)
T ss_pred CHhhcCCCCCCHHHHhCC-----CCcCC
Confidence 999999763 56554 78865
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=300.10 Aligned_cols=238 Identities=18% Similarity=0.276 Sum_probs=198.3
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
.|++.+.|| .|+++.||+|+++.+|+.|+||.+.. ......+.+|++++++++||||+++++++++.
T Consensus 1 ~y~~~~~l~--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 71 (284)
T cd07860 1 NFQKVEKIG--------EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE- 71 (284)
T ss_pred Cceeeeeec--------CCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccC-
Confidence 388999999 89999999999999999999998875 22335788999999999999999999999887
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
...|+||||+. +|..++.. .....+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.+||+|||++
T Consensus 72 -~~~~~v~e~~~~~l~~~~~~--~~~~~l~~~~~~~~~~~i~~~l~~lh-~~~i~H~~l~p~nill~~~~~~~l~dfg~~ 147 (284)
T cd07860 72 -NKLYLVFEFLHQDLKKFMDA--SPLSGIPLPLIKSYLFQLLQGLAFCH-SHRVLHRDLKPQNLLINTEGAIKLADFGLA 147 (284)
T ss_pred -CcEEEEeeccccCHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHEEECCCCCEEEeeccch
Confidence 89999999998 78777742 22356899999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc---------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--------------- 273 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--------------- 273 (852)
...... ........++..|+|||++.+ ..++.++|+|||||++|+|++|..||.+.....
T Consensus 148 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 223 (284)
T cd07860 148 RAFGVP----VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 223 (284)
T ss_pred hhcccC----ccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 744321 111223345678999998743 446788999999999999999999885432110
Q ss_pred -------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 274 -------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 274 -------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
....++..+.++|.+||..||.+||++.+++.| +||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~-----~~f 284 (284)
T cd07860 224 VWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH-----PFF 284 (284)
T ss_pred hhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC-----CCC
Confidence 013467888999999999999999999999997 887
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-33 Score=305.63 Aligned_cols=231 Identities=16% Similarity=0.260 Sum_probs=192.6
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHh-CCCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKT-LRHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~-LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|++|.||+|+++.+++.|+||++.. .........|..+++. ++||||+++++++++. ..+|+||||+. +
T Consensus 5 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~--~~~~lv~ey~~~g~ 82 (316)
T cd05619 5 KGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK--ENLFFVMEYLNGGD 82 (316)
T ss_pred eCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC--CEEEEEEeCCCCCc
Confidence 89999999999999999999999986 2334456677777775 4899999999999987 89999999997 7
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|..++.. ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++..... .....
T Consensus 83 L~~~l~~----~~~~~~~~~~~~~~qi~~al~~LH-~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~ 153 (316)
T cd05619 83 LMFHIQS----CHKFDLPRATFYAAEIICGLQFLH-SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENML----GDAKT 153 (316)
T ss_pred HHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCC----CCCce
Confidence 8888742 256889999999999999999999 89999999999999999999999999999863211 11112
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcCCCChhHHHHHHHhccC
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNIDNIPENLKRVYLELISE 292 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~~ip~~L~~li~~lL~~ 292 (852)
....||+.|+|||++.+..++.++|+|||||++|+|++|..||.+... ......++..+.+++.+||..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~ 233 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVR 233 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhcc
Confidence 245688899999999878889999999999999999999999965421 112345778899999999999
Q ss_pred CCCCCCCHH-HHHHhhcCCCCCCcchH
Q psy3914 293 RPNQRPNPA-DFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 293 nP~~Rps~~-elL~~l~~~~~fF~n~l 318 (852)
+|.+||++. +++.| +||....
T Consensus 234 ~P~~R~~~~~~l~~h-----~~~~~~~ 255 (316)
T cd05619 234 EPERRLGVKGDIRQH-----PFFREID 255 (316)
T ss_pred CHhhcCCChHHHHcC-----cccCCCC
Confidence 999999996 77776 8997743
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=314.29 Aligned_cols=242 Identities=16% Similarity=0.245 Sum_probs=201.2
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
....|++.+.|| .|++|.||.|.++.+++.|++|++.+ ......+.+|+.+++.++||||+++++.+
T Consensus 41 ~~~~y~i~~~lG--------~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~ 112 (371)
T cd05622 41 KAEDYEVVKVIG--------RGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF 112 (371)
T ss_pred chhhcEEEEEEe--------ecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 345799999999 99999999999999999999999975 22345677899999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
.+. .++|+||||+. +|.+++.. ..+++..+..++.||+.||.||| +.+|+||||||+||+++.+|.+||+
T Consensus 113 ~~~--~~~~lv~Ey~~gg~L~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDLkp~NIll~~~~~ikL~ 184 (371)
T cd05622 113 QDD--RYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIH-SMGFIHRDVKPDNMLLDKSGHLKLA 184 (371)
T ss_pred EcC--CEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HCCEEeCCCCHHHEEECCCCCEEEE
Confidence 987 89999999997 68888742 45788999999999999999999 9999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCC----CCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSH----VTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------- 272 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~----~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------- 272 (852)
|||++....... ........||+.|+|||++.+. .++.++|||||||++|||++|..||.+....
T Consensus 185 DfG~a~~~~~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~ 261 (371)
T cd05622 185 DFGTCMKMNKEG---MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 261 (371)
T ss_pred eCCceeEcCcCC---cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence 999987543211 1112245689999999998432 3778999999999999999999999654221
Q ss_pred -------cCcCCCChhHHHHHHHhccCCCCC--CCCHHHHHHhhcCCCCCCcch
Q psy3914 273 -------SNIDNIPENLKRVYLELISERPNQ--RPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 -------~~~~~ip~~L~~li~~lL~~nP~~--Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....++..+.++|..||..++.+ |+++.++++| +||++.
T Consensus 262 ~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h-----~~~~~~ 310 (371)
T cd05622 262 HKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH-----LFFKND 310 (371)
T ss_pred CCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC-----cccCCC
Confidence 112367889999999999854443 7899999997 788774
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=315.65 Aligned_cols=248 Identities=15% Similarity=0.170 Sum_probs=204.2
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcC--CCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG--SNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~--~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
....|++.+.|| .|++|.||.|..+. ++..|+||.+... ....+|+++|++|+||||+++++.+...
T Consensus 90 ~~~~y~i~~~Lg--------~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---~~~~~E~~il~~l~h~~iv~~~~~~~~~ 158 (392)
T PHA03207 90 VRMQYNILSSLT--------PGSEGEVFVCTKHGDEQRKKVIVKAVTGG---KTPGREIDILKTISHRAIINLIHAYRWK 158 (392)
T ss_pred ccCceEEEEeec--------CCCCeEEEEEEEcCCccceeEEEEecccc---ccHHHHHHHHHhcCCCCccceeeeEeeC
Confidence 345699999999 89999999998653 4678999988753 2456899999999999999999999987
Q ss_pred CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 130 SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 130 ~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+|+|||++. +|..++. ....+++..+..++.||+.||.||| +.+|+||||||+||+++.+|.+||+|||+
T Consensus 159 --~~~~lv~e~~~~~l~~~l~----~~~~l~~~~~~~i~~ql~~aL~~LH-~~givHrDlkp~Nill~~~~~~~l~DfG~ 231 (392)
T PHA03207 159 --STVCMVMPKYKCDLFTYVD----RSGPLPLEQAITIQRRLLEALAYLH-GRGIIHRDVKTENIFLDEPENAVLGDFGA 231 (392)
T ss_pred --CEEEEEehhcCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCHHHEEEcCCCCEEEccCcc
Confidence 89999999998 7887773 2367899999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc---------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--------------- 273 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--------------- 273 (852)
++........ .......||+.|+|||++....++.++|||||||++|||++|..||.+.....
T Consensus 232 a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~ 309 (392)
T PHA03207 232 ACKLDAHPDT--PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVH 309 (392)
T ss_pred ccccCccccc--ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccC
Confidence 8754332211 11224568899999999988888999999999999999999999985432100
Q ss_pred ---C------------------------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHHH
Q psy3914 274 ---N------------------------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLID 320 (852)
Q Consensus 274 ---~------------------------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv~ 320 (852)
. -..++..+.++|++||..+|.+||++.+++.| +||.....+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~-----p~f~~~~~~ 384 (392)
T PHA03207 310 PLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL-----PLFTKEPIN 384 (392)
T ss_pred ccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC-----chhhccchh
Confidence 0 01345678889999999999999999999998 999776555
Q ss_pred HHHH
Q psy3914 321 ALLF 324 (852)
Q Consensus 321 ~l~~ 324 (852)
.+++
T Consensus 385 ~~~~ 388 (392)
T PHA03207 385 LLNI 388 (392)
T ss_pred hhcC
Confidence 5443
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=310.31 Aligned_cols=230 Identities=16% Similarity=0.234 Sum_probs=189.8
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHH-HHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVK-KLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~-~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|+++.||.|+++.+|+.|+||++... .....+.+|.. +++.++||||+++++.++.. +.+|+||||+. +
T Consensus 5 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~--~~~~lv~e~~~~~~ 82 (325)
T cd05604 5 KGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTT--EKLYFVLDFVNGGE 82 (325)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecC--CEEEEEEcCCCCCC
Confidence 899999999999999999999999761 22233444444 57789999999999999987 89999999998 6
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|..++. ....+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|||++...... ....
T Consensus 83 L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH-~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~----~~~~ 153 (325)
T cd05604 83 LFFHLQ----RERSFPEPRARFYAAEIASALGYLH-SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ----SDTT 153 (325)
T ss_pred HHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC----CCCc
Confidence 777763 3367899999999999999999999 899999999999999999999999999998632111 1122
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcCCCChhHHHHHHHhccC
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNIDNIPENLKRVYLELISE 292 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~~ip~~L~~li~~lL~~ 292 (852)
....|++.|+|||++.+..++.++|+|||||++|+|++|..||.+... ......++..+.+++++||..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~ 233 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEK 233 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhcc
Confidence 245688899999999888888999999999999999999999965422 112346788999999999999
Q ss_pred CCCCCCCHH----HHHHhhcCCCCCCcch
Q psy3914 293 RPNQRPNPA----DFIMRNRKPGGYFKND 317 (852)
Q Consensus 293 nP~~Rps~~----elL~~l~~~~~fF~n~ 317 (852)
+|.+||+.. ++++| +||...
T Consensus 234 ~p~~R~~~~~~~~~i~~h-----~~f~~~ 257 (325)
T cd05604 234 DRQRRLGAKEDFLEIQEH-----PFFESL 257 (325)
T ss_pred CHHhcCCCCCCHHHHhcC-----CCcCCC
Confidence 999999774 67765 899763
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=313.69 Aligned_cols=245 Identities=13% Similarity=0.138 Sum_probs=203.3
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.|| .|++|.||.|.++.+++.|+||++.. ......+.+|+.++..++||||+++++.+++.
T Consensus 2 ~f~~~~~lG--------~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 73 (360)
T cd05627 2 DFESLKVIG--------RGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDK 73 (360)
T ss_pred CceEEEEEe--------eCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC
Confidence 489999999 99999999999999999999999975 33456788899999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
.++||||||+. +|.+++.+ .+.+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|||
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~~L~~lH-~~givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 74 --RNLYLIMEFLPGGDMMTLLMK----KDTLSEEATQFYIAETVLAIDAIH-QLGFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred --CEEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeEccCCCHHHEEECCCCCEEEeecc
Confidence 89999999998 68888743 357899999999999999999999 9999999999999999999999999999
Q ss_pred hhhccccccCC-------------------------------CCcccccccCCCcccCCccccCCCCCcchhHHhHHHHH
Q psy3914 208 YMEKISEASCI-------------------------------PMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILI 256 (852)
Q Consensus 208 ~a~~~~~~~~~-------------------------------~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll 256 (852)
++......... .........||+.|+|||++.+..++.++|+|||||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 226 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccccee
Confidence 98643221000 00001134689999999999888899999999999999
Q ss_pred HHHHhCCCCCCCCcccc-------------Cc--CCCChhHHHHHHHhccCCCCCCC---CHHHHHHhhcCCCCCCcchH
Q psy3914 257 WEVFNGPLQSTNRKSLS-------------NI--DNIPENLKRVYLELISERPNQRP---NPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 257 ~el~tG~~pf~~~~~l~-------------~~--~~ip~~L~~li~~lL~~nP~~Rp---s~~elL~~l~~~~~fF~n~l 318 (852)
|||++|..||.+..... .. ..+++.+.+++.+|+ .+|..|+ ++.++++| +||++.-
T Consensus 227 yel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h-----p~f~~~~ 300 (360)
T cd05627 227 YEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH-----PFFEGVD 300 (360)
T ss_pred eecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC-----CCCCCCC
Confidence 99999999996442211 11 236788999999987 4999998 47899887 9998754
Q ss_pred HH
Q psy3914 319 ID 320 (852)
Q Consensus 319 v~ 320 (852)
..
T Consensus 301 ~~ 302 (360)
T cd05627 301 WG 302 (360)
T ss_pred HH
Confidence 33
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >KOG4721|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-34 Score=312.97 Aligned_cols=231 Identities=16% Similarity=0.258 Sum_probs=199.6
Q ss_pred eccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEE
Q psy3914 59 GEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAV 138 (852)
Q Consensus 59 ~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVt 138 (852)
.+-+| .|+.|.||+|+. .++.||||+++. +-..+++-|++|+|||||.|.++|... .++||||
T Consensus 129 LeWlG--------SGaQGAVF~Grl--~netVAVKKV~e-----lkETdIKHLRkLkH~NII~FkGVCtqs--PcyCIiM 191 (904)
T KOG4721|consen 129 LEWLG--------SGAQGAVFLGRL--HNETVAVKKVRE-----LKETDIKHLRKLKHPNIITFKGVCTQS--PCYCIIM 191 (904)
T ss_pred hhhhc--------cCcccceeeeec--cCceehhHHHhh-----hhhhhHHHHHhccCcceeeEeeeecCC--ceeEEee
Confidence 46677 899999999998 488999998763 445679999999999999999999987 9999999
Q ss_pred eecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhcccccc
Q psy3914 139 EYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEAS 216 (852)
Q Consensus 139 E~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~ 216 (852)
|||. .|+.+|+ ....+....+..+..+|+.|+.||| .++|||||||.-||||+.+..+||+|||-++...+.
T Consensus 192 EfCa~GqL~~VLk----a~~~itp~llv~Wsk~IA~GM~YLH-~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~- 265 (904)
T KOG4721|consen 192 EFCAQGQLYEVLK----AGRPITPSLLVDWSKGIAGGMNYLH-LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK- 265 (904)
T ss_pred eccccccHHHHHh----ccCccCHHHHHHHHHHhhhhhHHHH-HhhHhhhccCCCceEeeccceEEeccccchHhhhhh-
Confidence 9999 7999994 3367788888999999999999999 999999999999999999999999999998865442
Q ss_pred CCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-------------ccCcCCCChhHH
Q psy3914 217 CIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-------------LSNIDNIPENLK 283 (852)
Q Consensus 217 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-------------l~~~~~ip~~L~ 283 (852)
.....+.||..|||||++.+...+.++|||||||+||||+||..||.+-+. +..+..+|+.+.
T Consensus 266 ----STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~Gfk 341 (904)
T KOG4721|consen 266 ----STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFK 341 (904)
T ss_pred ----hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHH
Confidence 122357899999999999999999999999999999999999999964332 223578899999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHHH
Q psy3914 284 RVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLID 320 (852)
Q Consensus 284 ~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv~ 320 (852)
-+++.||+..|..||++.+++.|+ ..|.-.+..
T Consensus 342 lL~Kqcw~sKpRNRPSFrqil~Hl----dIa~pell~ 374 (904)
T KOG4721|consen 342 LLLKQCWNSKPRNRPSFRQILLHL----DIASPELLS 374 (904)
T ss_pred HHHHHHHhcCCCCCccHHHHHHHH----hhcCHHHhc
Confidence 999999999999999999999997 455554433
|
|
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-33 Score=295.12 Aligned_cols=234 Identities=13% Similarity=0.213 Sum_probs=197.0
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.+|++++.|| .|+++.||+|+.+.+++.|+||++.. ......+.+|+.++++++||||+++++++...
T Consensus 9 ~~y~~~~~lg--------~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~-- 78 (267)
T cd06646 9 HDYELIQRVG--------SGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSR-- 78 (267)
T ss_pred hhcchhheee--------cCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--
Confidence 4599999999 89999999999999999999999976 23455788999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+|+||||+. +|.+++.+ .+.+++..+..++.|++.||.||| +.+++||||+|+||+++.+|.+||+|||++
T Consensus 79 ~~~~iv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p~nill~~~~~~~l~dfg~~ 153 (267)
T cd06646 79 EKLWICMEYCGGGSLQDIYHV----TGPLSELQIAYVCRETLQGLAYLH-SKGKMHRDIKGANILLTDNGDVKLADFGVA 153 (267)
T ss_pred CEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCHHHEEECCCCCEEECcCccc
Confidence 89999999998 68887742 357899999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCcccc---CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSL---SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------------- 272 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------------- 272 (852)
....... .......++..|+|||.+. ...++.++|+|||||++|+|++|..||......
T Consensus 154 ~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 229 (267)
T cd06646 154 AKITATI----AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPP 229 (267)
T ss_pred eeecccc----cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCC
Confidence 7543211 1112345777999999873 444678899999999999999999887432111
Q ss_pred --cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 273 --SNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 273 --~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.....++..+.+++++||..+|.+||+++++++|
T Consensus 230 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 230 KLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred CCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 1123467899999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=291.07 Aligned_cols=239 Identities=17% Similarity=0.264 Sum_probs=200.7
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
.|++.+.+| .|+++.||.+.++.+++.|+||.+.. ......+.+|++++++++||||+++++.+...
T Consensus 1 ~y~~~~~lg--------~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~- 71 (257)
T cd08223 1 AYCFVRVVG--------KGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE- 71 (257)
T ss_pred CceEEEEec--------CCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC-
Confidence 489999999 89999999999999999999999876 22345688999999999999999999988643
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
...+|+++||+. +|.+++... ....+++.++..++.||+.||.||| +.+++||||+|+||+++.++.++|+|||+
T Consensus 72 ~~~~~lv~e~~~~~~l~~~l~~~--~~~~l~~~~~~~~~~~l~~~l~~lH-~~~i~H~di~p~nil~~~~~~~~l~df~~ 148 (257)
T cd08223 72 DGLLYIVMGFCEGGDLYHKLKEQ--KGKLLPENQVVEWFVQIAMALQYLH-EKHILHRDLKTQNVFLTRTNIIKVGDLGI 148 (257)
T ss_pred CCEEEEEecccCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccCCCchhEEEecCCcEEEecccc
Confidence 257899999997 688888432 2345899999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------cCcC
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------SNID 276 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------~~~~ 276 (852)
+....... .......+++.|+|||+..+..++.++|+|||||++|+|++|..||.+.... ....
T Consensus 149 ~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (257)
T cd08223 149 ARVLENQC----DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPK 224 (257)
T ss_pred eEEecccC----CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCcc
Confidence 87543211 1122345778999999997778888999999999999999999998543211 1234
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.+++.+.+++.+|++.+|..||++.++++| +||
T Consensus 225 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~-----~~~ 257 (257)
T cd08223 225 DYSPELGELIATMLSKRPEKRPSVKSILRQ-----PYI 257 (257)
T ss_pred ccCHHHHHHHHHHhccCcccCCCHHHHhcC-----CCC
Confidence 577899999999999999999999999997 776
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-33 Score=297.57 Aligned_cols=236 Identities=18% Similarity=0.257 Sum_probs=196.9
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|+++.||+|+++.+|+.|++|++.. ......+.+|++++++++||||+++++.++..
T Consensus 2 ~y~~~~~l~--------~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~- 72 (286)
T cd07847 2 KYEKLSKIG--------EGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRK- 72 (286)
T ss_pred ceeeeeeec--------ccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeC-
Confidence 589999999 89999999999999999999998865 22345678999999999999999999999987
Q ss_pred CCeEEEEEeecc-c-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE-P-IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~-~-L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+|+||||+. . |..++ .....+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.+||+|||+
T Consensus 73 -~~~~~v~e~~~~~~l~~~~----~~~~~~~~~~~~~~~~ql~~~l~~LH-~~~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 73 -RKLHLVFEYCDHTVLNELE----KNPRGVPEHLIKKIIWQTLQAVNFCH-KHNCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred -CEEEEEEeccCccHHHHHH----hCCCCCCHHHHHHHHHHHHHHHHHHH-HCCceecCCChhhEEEcCCCcEEECcccc
Confidence 89999999998 3 44443 23356899999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc--------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS-------------- 273 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~-------------- 273 (852)
+..+..... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.+.....
T Consensus 147 ~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 222 (286)
T cd07847 147 ARILTGPGD----DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIP 222 (286)
T ss_pred ceecCCCcc----cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 875432211 1122345678999999843 557889999999999999999999985432110
Q ss_pred ----------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 274 ----------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 274 ----------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
....++..+.+++.+||..+|++||++.+++.| +||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~-----~~f 286 (286)
T cd07847 223 RHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH-----PYF 286 (286)
T ss_pred HHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC-----CCC
Confidence 023567889999999999999999999999997 887
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=298.59 Aligned_cols=238 Identities=20% Similarity=0.279 Sum_probs=196.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
..|++.+.|| .|+++.||+|+++.+++.|+||.+.. ......+.+|+.+++.++||||+++++++.+.
T Consensus 5 ~~y~~~~~lg--------~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 75 (291)
T cd07844 5 ETYKKLDKLG--------EGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTK- 75 (291)
T ss_pred cceeEEEEEe--------ecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecC-
Confidence 4599999999 89999999999999999999999876 22234567899999999999999999999987
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
.+.|+||||+. +|.+++.+. ...+++..++.++.||+.||.||| +.+++||||+|+||+++.+|.+||+|||++
T Consensus 76 -~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lH-~~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 150 (291)
T cd07844 76 -KTLTLVFEYLDTDLKQYMDDC---GGGLSMHNVRLFLFQLLRGLAYCH-QRRVLHRDLKPQNLLISERGELKLADFGLA 150 (291)
T ss_pred -CeEEEEEecCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH-hCCeecccCCHHHEEEcCCCCEEECccccc
Confidence 89999999999 788877432 246889999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------- 272 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------- 272 (852)
...... ........++..|+|||++. ...++.++|+|||||++|+|++|..||.+....
T Consensus 151 ~~~~~~----~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
T cd07844 151 RAKSVP----SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTE 226 (291)
T ss_pred cccCCC----CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCCh
Confidence 643211 11111234567899999984 455788999999999999999999998543200
Q ss_pred --------------------------cCcCCCC--hhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 --------------------------SNIDNIP--ENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 --------------------------~~~~~ip--~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.....+. ..+.+++.+||+.+|.+||++.+++.| +||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~-----~~f 291 (291)
T cd07844 227 ETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH-----PYF 291 (291)
T ss_pred hhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC-----CCC
Confidence 0012334 778899999999999999999999997 787
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=290.77 Aligned_cols=235 Identities=16% Similarity=0.213 Sum_probs=200.3
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
.|++.+.|| .|+++.||+|+.+.+++.|++|.+.. ......+.+|+++++.++||||+++++.+.+.
T Consensus 1 ~~~~~~~l~--------~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 71 (256)
T cd08529 1 DFEILNKIG--------KGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK- 71 (256)
T ss_pred CceEeEEec--------CCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC-
Confidence 378889999 89999999999999999999999875 23456788999999999999999999999987
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
...|+||||+. +|.+++... ....+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+|||+
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~~l~~al~~lH-~~~i~h~dl~~~nili~~~~~~~l~df~~ 147 (256)
T cd08529 72 -GKLNIVMEYAENGDLHKLLKMQ--RGRPLPEDQVWRFFIQILLGLAHLH-SKKILHRDIKSLNLFLDAYDNVKIGDLGV 147 (256)
T ss_pred -CEEEEEEEeCCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCcceEEEeCCCCEEEccccc
Confidence 89999999997 799888532 2357889999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------cCcC
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------SNID 276 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------~~~~ 276 (852)
+..+.... .......+++.|+|||+..+..++.++|+|||||++|+|++|..||...... ....
T Consensus 148 ~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 223 (256)
T cd08529 148 AKLLSDNT----NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQ 223 (256)
T ss_pred ceeccCcc----chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcc
Confidence 87543211 1112345677899999997777889999999999999999999998543321 1123
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.++..+.+++.+||+.+|++||++.+++++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 224 MYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 678899999999999999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-33 Score=307.15 Aligned_cols=231 Identities=15% Similarity=0.228 Sum_probs=194.3
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|++|.||.|..+.+++.|+||++.+ ......+.+|+.++.++ +||||+++++++++. +.+|+||||+. +
T Consensus 5 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv~e~~~~~~ 82 (327)
T cd05617 5 RGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTT--SRLFLVIEYVNGGD 82 (327)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeC--CEEEEEEeCCCCCc
Confidence 89999999999999999999999986 23345678899988888 599999999999987 89999999998 6
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|..++.. ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++..... .....
T Consensus 83 L~~~~~~----~~~l~~~~~~~~~~qi~~al~~lH-~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~----~~~~~ 153 (327)
T cd05617 83 LMFHMQR----QRKLPEEHARFYAAEICIALNFLH-ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLG----PGDTT 153 (327)
T ss_pred HHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCCHHHEEEeCCCCEEEeccccceeccC----CCCce
Confidence 8777732 357899999999999999999999 89999999999999999999999999999863211 11122
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc------------------ccCcCCCChhHHHH
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS------------------LSNIDNIPENLKRV 285 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------------------l~~~~~ip~~L~~l 285 (852)
....||+.|+|||++.+..++.++|+|||||++|+|++|..||..... ...+..++..+.++
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l 233 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHV 233 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 345688999999999888889999999999999999999999943111 12234677889999
Q ss_pred HHHhccCCCCCCCC------HHHHHHhhcCCCCCCcchH
Q psy3914 286 YLELISERPNQRPN------PADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 286 i~~lL~~nP~~Rps------~~elL~~l~~~~~fF~n~l 318 (852)
+++||+.||.+|++ +.++++| +||+...
T Consensus 234 i~~~L~~dP~~R~~~~~~~~~~~i~~h-----~~f~~~~ 267 (327)
T cd05617 234 LKGFLNKDPKERLGCQPQTGFSDIKSH-----TFFRSID 267 (327)
T ss_pred HHHHhccCHHHcCCCCCCCCHHHHHcC-----CCCCCCC
Confidence 99999999999998 4688887 8997743
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-33 Score=292.29 Aligned_cols=238 Identities=14% Similarity=0.233 Sum_probs=203.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
..|++.+.|| .|+++.||.|..+.++..|++|.+......+.+.+|+++++.++||||+++++.+.+. ..
T Consensus 3 ~~y~~~~~i~--------~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~ 72 (256)
T cd06612 3 EVFDILEKLG--------EGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKN--TD 72 (256)
T ss_pred ccchhhhhhc--------CCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC--Cc
Confidence 4589999999 8999999999999889999999998744477899999999999999999999999987 89
Q ss_pred EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 134 VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 134 ~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
+|+++||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||+|+||+++.++.+||+|||++..
T Consensus 73 ~~l~~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~~l~~lh-~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~ 148 (256)
T cd06612 73 LWIVMEYCGAGSVSDIMKI---TNKTLTEEEIAAILYQTLKGLEYLH-SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQ 148 (256)
T ss_pred EEEEEecCCCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCcceEEECCCCcEEEcccccchh
Confidence 999999998 78888843 2356899999999999999999999 89999999999999999999999999999875
Q ss_pred cccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------cCcCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------SNIDN 277 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------~~~~~ 277 (852)
...... ......++..|+|||++.+..++.++|+|||||++|+|++|..||...... .....
T Consensus 149 ~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (256)
T cd06612 149 LTDTMA----KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEK 224 (256)
T ss_pred cccCcc----ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhh
Confidence 433211 112344677899999997778889999999999999999999998543211 11235
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
++..+.+++.+||..+|.+||++.+++.| +||
T Consensus 225 ~~~~~~~~i~~~l~~~P~~Rps~~~il~~-----~~~ 256 (256)
T cd06612 225 WSPEFNDFVKKCLVKDPEERPSAIQLLQH-----PFI 256 (256)
T ss_pred cCHHHHHHHHHHHhcChhhCcCHHHHhcC-----CCC
Confidence 67789999999999999999999999997 776
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-33 Score=297.25 Aligned_cols=239 Identities=16% Similarity=0.239 Sum_probs=201.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++++.|| .|+++.||+|+++.+|..|+||++... .....+.+|+.+++.++||||+++++++...
T Consensus 1 ~y~~~~~l~--------~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~- 71 (286)
T cd07832 1 RYKILGRIG--------EGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHG- 71 (286)
T ss_pred CceEEeecc--------cCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecC-
Confidence 489999999 999999999999999999999999862 2345788999999999999999999999987
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+|+|+||+. +|.+++... ...+++..+..++.||+.||.||| +.+++|+||+|+||+++.+|.++|+|||++
T Consensus 72 -~~~~~v~e~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~ 146 (286)
T cd07832 72 -SGFVLVMEYMPSDLSEVLRDE---ERPLPEAQVKSYMRMLLKGVAYMH-ANGIMHRDLKPANLLISADGVLKIADFGLA 146 (286)
T ss_pred -CeeEEEecccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCcCHHHEEEcCCCcEEEeeeeec
Confidence 89999999998 788887432 256899999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------- 272 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------- 272 (852)
........ .......++..|+|||++. ...++.++|||||||++|+|++|.++|.+....
T Consensus 147 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (286)
T cd07832 147 RLFSEEEP---RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEE 223 (286)
T ss_pred ccccCCCC---CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChH
Confidence 75432211 1122345788999999984 445688999999999999999998777433210
Q ss_pred -------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 273 -------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 273 -------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
.....++..+.+++.+||..+|.+||++.+++.| +||.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h-----~~~~ 286 (286)
T cd07832 224 TWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH-----PYFT 286 (286)
T ss_pred HHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC-----cCcC
Confidence 0113567889999999999999999999999998 8873
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-33 Score=311.28 Aligned_cols=237 Identities=16% Similarity=0.219 Sum_probs=196.1
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
...+|++.+.|| .|++|.||.|+++.++..|++|+.... ...+|+.++++++||||+++++++...
T Consensus 64 ~~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~valK~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 129 (357)
T PHA03209 64 ASLGYTVIKTLT--------PGSEGRVFVATKPGQPDPVVLKIGQKG----TTLIEAMLLQNVNHPSVIRMKDTLVSG-- 129 (357)
T ss_pred hhcCcEEEEEec--------CCCCeEEEEEEECCCCceEEEEeCCcc----ccHHHHHHHHhCCCCCCcChhheEEeC--
Confidence 456799999999 999999999999999999999986542 235689999999999999999999987
Q ss_pred CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
...|+|+|++. +|..++.. ....+++..+..++.||+.||.||| ..+|+||||||+||+++..+.+||+|||++.
T Consensus 130 ~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 205 (357)
T PHA03209 130 AITCMVLPHYSSDLYTYLTK---RSRPLPIDQALIIEKQILEGLRYLH-AQRIIHRDVKTENIFINDVDQVCIGDLGAAQ 205 (357)
T ss_pred CeeEEEEEccCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHEEECCCCCEEEecCcccc
Confidence 88999999998 78887743 2356899999999999999999999 8999999999999999999999999999986
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCC-CCCccc-----------------
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQS-TNRKSL----------------- 272 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf-~~~~~l----------------- 272 (852)
..... .......||..|+|||++.+..++.++|||||||++|||+++..++ ......
T Consensus 206 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~ 280 (357)
T PHA03209 206 FPVVA-----PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIIS 280 (357)
T ss_pred ccccC-----cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHH
Confidence 32111 1112356888999999998788899999999999999999864333 211000
Q ss_pred ---------c----------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 273 ---------S----------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 273 ---------~----------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
. ...+++..+..+|.+||+.||.+|||+.++++| +||+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h-----p~f~ 355 (357)
T PHA03209 281 TLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY-----PMFA 355 (357)
T ss_pred HhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC-----chhc
Confidence 0 002456677789999999999999999999998 9997
Q ss_pred c
Q psy3914 316 N 316 (852)
Q Consensus 316 n 316 (852)
+
T Consensus 356 ~ 356 (357)
T PHA03209 356 Q 356 (357)
T ss_pred c
Confidence 5
|
|
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=293.14 Aligned_cols=240 Identities=18% Similarity=0.243 Sum_probs=201.6
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC-----------chHHHHHHHHHHHhCCCCCcceEe
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD-----------TYEPALSYVKKLKTLRHPSILTFL 123 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~-----------~~~~~~~E~~~Lk~LrHPnIlk~~ 123 (852)
+|.++..|| .|+++.||.|.+..++..|++|.+.... ....+.+|+.++++++||||++++
T Consensus 1 ~~~~~~~ig--------~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 72 (267)
T cd06628 1 KWIKGALIG--------SGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYL 72 (267)
T ss_pred Cccccceee--------cCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEE
Confidence 478888999 8999999999999899999999887611 224678999999999999999999
Q ss_pred eeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcE
Q psy3914 124 DSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEW 201 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~ 201 (852)
+++... .+.|+||||+. +|.+++.. .+.+++..+..++.||+.||.||| +.+++||||+|+||+++.++.+
T Consensus 73 ~~~~~~--~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lH-~~~ivH~di~p~nil~~~~~~~ 145 (267)
T cd06628 73 GSSLDA--DHLNIFLEYVPGGSVAALLNN----YGAFEETLVRNFVRQILKGLNYLH-NRGIIHRDIKGANILVDNKGGI 145 (267)
T ss_pred EEEEeC--CccEEEEEecCCCCHHHHHHh----ccCccHHHHHHHHHHHHHHHHHHH-hcCcccccCCHHHEEEcCCCCE
Confidence 999987 89999999997 68888843 256888899999999999999999 8999999999999999999999
Q ss_pred EEcccchhhccccccC--CCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-------
Q psy3914 202 KLGGLEYMEKISEASC--IPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------- 272 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~--~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------- 272 (852)
||+|||++........ ......+...++..|+|||.+.+..++.++|+|||||++|+|++|..||.+....
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 225 (267)
T cd06628 146 KISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIG 225 (267)
T ss_pred EecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHh
Confidence 9999999875542111 1111223355778999999997777888999999999999999999999543221
Q ss_pred -----cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 -----SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 -----~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.....++..+.+++++||+.+|.+||++.++++| +||
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~-----~~~ 267 (267)
T cd06628 226 ENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH-----PFL 267 (267)
T ss_pred ccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC-----CCC
Confidence 2235678899999999999999999999999997 776
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=298.27 Aligned_cols=242 Identities=15% Similarity=0.224 Sum_probs=201.1
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC--CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA--DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
....|++.+.|| .|+++.||+|....++..|++|++... .....+.+|+.+++.++||||+++++.+..+
T Consensus 10 ~~~~y~i~~~lg--------~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 81 (292)
T cd06644 10 PNEVWEIIGELG--------DGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWD 81 (292)
T ss_pred cchhhhhhheec--------CCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC
Confidence 345599999999 899999999999999999999999862 2345678899999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+.+|+||||+. +|..++.+ ....+++..+..++.||+.+|.||| +.+++||||+|+||+++.+|.+||+|||
T Consensus 82 --~~~~lv~e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH-~~~i~H~dlkp~Nili~~~~~~kl~dfg 155 (292)
T cd06644 82 --GKLWIMIEFCPGGAVDAIMLE---LDRGLTEPQIQVICRQMLEALQYLH-SMKIIHRDLKAGNVLLTLDGDIKLADFG 155 (292)
T ss_pred --CeEEEEEecCCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHh-cCCeeecCCCcceEEEcCCCCEEEccCc
Confidence 89999999998 57666632 2356899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCcccc-----CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSL-----SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS----------- 271 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-----~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~----------- 271 (852)
++...... ........++..|+|||++. ...++.++|+|||||++|+|++|..||.....
T Consensus 156 ~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 231 (292)
T cd06644 156 VSAKNVKT----LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE 231 (292)
T ss_pred cceecccc----ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCC
Confidence 87643211 11122345677999999973 34467789999999999999999999854321
Q ss_pred ---ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 272 ---LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 272 ---l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
......++..+.+++++||..+|.+||++.++++| +||.+
T Consensus 232 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~-----~~~~~ 274 (292)
T cd06644 232 PPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH-----PFVSS 274 (292)
T ss_pred CccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC-----ccccc
Confidence 11234567889999999999999999999999997 88864
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=293.88 Aligned_cols=239 Identities=17% Similarity=0.213 Sum_probs=199.9
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
+|++.+.|| .|+++.||+|+.+.++..|+||.+.. ......+.+|+.+++.++||||+++++++.+.
T Consensus 3 ~~~i~~~l~--------~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 74 (267)
T cd08228 3 NFQIEKKIG--------RGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED 74 (267)
T ss_pred ceeeeeeec--------cCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC
Confidence 589999999 89999999999999999999998765 12234578899999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+..|+|+||+. +|.+++.........+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+|||
T Consensus 75 --~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH-~~~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 75 --NELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH-SRRVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred --CeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh-hCCeeCCCCCHHHEEEcCCCCEEECccc
Confidence 89999999998 788888544334456889999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----------c---
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-----------S--- 273 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-----------~--- 273 (852)
++....... .......++..|+|||.+.+..++.++|+|||||++|+|++|..||...... .
T Consensus 152 ~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 227 (267)
T cd08228 152 LGRFFSSKT----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPP 227 (267)
T ss_pred cceeccchh----HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCC
Confidence 987543211 1112345677899999997777888999999999999999999998532110 0
Q ss_pred -CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 274 -NIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 274 -~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
....++..+.+++.+||..+|.+||++.++++.++
T Consensus 228 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~ 263 (267)
T cd08228 228 LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAK 263 (267)
T ss_pred CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHH
Confidence 11356778999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=290.75 Aligned_cols=235 Identities=15% Similarity=0.252 Sum_probs=199.3
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
..|++.+.+| .|+++.||.|....++..+++|++.. ......+.+|+.+++.++||||+++++.+...
T Consensus 3 ~~~~~~~~l~--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-- 72 (262)
T cd06613 3 EDYELIQRIG--------SGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRR-- 72 (262)
T ss_pred cceEEEEEec--------CCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeC--
Confidence 3599999999 89999999999999999999999987 33567889999999999999999999999887
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+|++|||+. +|.+++... ...+++..+..++.|++.||.||| +.+++|+||+|+||+++.+|.+||+|||++
T Consensus 73 ~~~~l~~e~~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh-~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 148 (262)
T cd06613 73 DKLWIVMEYCGGGSLQDIYQVT---RGPLSELQIAYVCRETLKGLAYLH-ETGKIHRDIKGANILLTEDGDVKLADFGVS 148 (262)
T ss_pred CEEEEEEeCCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHH-hCCceecCCChhhEEECCCCCEEECccccc
Confidence 89999999998 688877432 257899999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCC---CCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSH---VTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------------- 272 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~---~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------------- 272 (852)
....... .......++..|+|||.+.+. .++.++|+|||||++|+|++|..||.+....
T Consensus 149 ~~~~~~~----~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~ 224 (262)
T cd06613 149 AQLTATI----AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPP 224 (262)
T ss_pred hhhhhhh----hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCc
Confidence 7543211 111234567789999998555 7788999999999999999999998543211
Q ss_pred --cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 273 --SNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 273 --~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.....++..+.+++++||..+|..||++.+++.|
T Consensus 225 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 225 KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1123457789999999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=296.74 Aligned_cols=239 Identities=17% Similarity=0.240 Sum_probs=199.8
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
+|++.+.|| .|+++.||+|+++.+|..|+||++.. ......+.+|+.+++.++||||+++++.+.+.
T Consensus 1 ~y~~~~~l~--------~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-- 70 (284)
T cd07836 1 NFKQLEKLG--------EGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTE-- 70 (284)
T ss_pred CceEeeeec--------cCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeC--
Confidence 489999999 89999999999999999999999876 23456778899999999999999999999987
Q ss_pred CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
+..|+||||+. +|.+++... .....+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.++|+|||++.
T Consensus 71 ~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 71 NKLMLVFEYMDKDLKKYMDTH-GVRGALDPNTVKSFTYQLLKGIAFCH-ENRVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred CcEEEEEecCCccHHHHHHhc-CCCCCcCHHHHHHHHHHHHHHHHHHH-HCCeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 88999999999 787777432 22346899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc----------------
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---------------- 273 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---------------- 273 (852)
..... ........++..|++||++. ...++.++|+|+|||++|+|++|..||.+.....
T Consensus 149 ~~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (284)
T cd07836 149 AFGIP----VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTEST 224 (284)
T ss_pred hhcCC----ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhh
Confidence 44221 11222344677899999974 4457889999999999999999999985432110
Q ss_pred ------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 274 ------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 274 ------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
....++..+.+++.+||+.+|.+||++.++++| +||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~-----~~f 284 (284)
T cd07836 225 WPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH-----PWF 284 (284)
T ss_pred HHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC-----CCC
Confidence 012457788999999999999999999999997 887
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=298.73 Aligned_cols=237 Identities=16% Similarity=0.236 Sum_probs=203.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.+|++.+.+| .|++++||.|.+..+|+.|+||.+.. ......+.+|+..++.++||||+++++.+...
T Consensus 19 ~~y~~~~~lg--------~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-- 88 (296)
T cd06655 19 KKYTRYEKIG--------QGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVG-- 88 (296)
T ss_pred ceEEEEEEEe--------cCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecC--
Confidence 4599999999 89999999999999999999999876 33456788999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+|+|+||+. +|..++.. ..+++.++..++.|++.||.||| +.+++||||+|+||+++.+|.+||+|||++
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH-~~~i~H~dL~p~Nili~~~~~~kl~dfg~~ 162 (296)
T cd06655 89 DELFVVMEYLAGGSLTDVVTE-----TCMDEAQIAAVCRECLQALEFLH-ANQVIHRDIKSDNVLLGMDGSVKLTDFGFC 162 (296)
T ss_pred ceEEEEEEecCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEECCCCCEEEccCccc
Confidence 89999999998 68777732 45889999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------ccCc
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------LSNI 275 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------l~~~ 275 (852)
........ ......++..|+|||.+.+..++.++|+|||||++|+|++|..||.+... ....
T Consensus 163 ~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (296)
T cd06655 163 AQITPEQS----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP 238 (296)
T ss_pred hhcccccc----cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCc
Confidence 75432111 11234577899999999777788899999999999999999999864322 1234
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
..+++.+.++|++||..+|.+||++.+++.| +||+
T Consensus 239 ~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~-----~~~~ 273 (296)
T cd06655 239 EKLSPIFRDFLNRCLEMDVEKRGSAKELLQH-----PFLK 273 (296)
T ss_pred ccCCHHHHHHHHHHhhcChhhCCCHHHHhhC-----hHhh
Confidence 5688899999999999999999999999997 7775
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=335.75 Aligned_cols=244 Identities=18% Similarity=0.224 Sum_probs=201.6
Q ss_pred CCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEee
Q psy3914 49 DASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLD 124 (852)
Q Consensus 49 ~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d 124 (852)
.+....+|++.+.|| .|+|++||+|+++.++..|++|++.. ......+.+|+.+|+.|+||||+++++
T Consensus 8 ge~~l~~YeIl~kLG--------~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d 79 (1021)
T PTZ00266 8 GESRLNEYEVIKKIG--------NGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYID 79 (1021)
T ss_pred CccccCCEEEEEEEe--------cCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEE
Confidence 334455799999999 99999999999999999999999876 233457889999999999999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CceecccCCCCEEE
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDA-------DLRHNHVNHTSIFI 195 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~-------~ivH~DIkp~NIlV 195 (852)
+|.......+||||||+. +|..+|.........+++..++.++.||+.||.||| .. +||||||||+||||
T Consensus 80 ~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLH-s~g~~~~~k~IVHRDLKPeNILL 158 (1021)
T PTZ00266 80 RFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCH-NLKDGPNGERVLHRDLKPQNIFL 158 (1021)
T ss_pred EEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH-hcccccccCCceeccCcHHHeEe
Confidence 986544468999999998 799998655555567999999999999999999999 53 49999999999999
Q ss_pred cc-----------------CCcEEEcccchhhccccccCCCCcccccccCCCcccCCcccc--CCCCCcchhHHhHHHHH
Q psy3914 196 NS-----------------CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL--SHVTKCSTDMYGLGILI 256 (852)
Q Consensus 196 ~~-----------------~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~--~~~~~~~sDIwSLG~ll 256 (852)
+. .+.+||+|||++..+.... ......||+.|+|||++. ...++.++|||||||++
T Consensus 159 ~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-----~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~IL 233 (1021)
T PTZ00266 159 STGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES-----MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCII 233 (1021)
T ss_pred ecCccccccccccccccCCCCceEEccCCccccccccc-----cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHH
Confidence 64 2348999999987543211 122456889999999983 34578899999999999
Q ss_pred HHHHhCCCCCCCCcccc------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 257 WEVFNGPLQSTNRKSLS------------NIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 257 ~el~tG~~pf~~~~~l~------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
|+|++|..||....... .+..++..+.++|..||..+|..||++.++|.+
T Consensus 234 YELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 234 YELCSGKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred HHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 99999999995432211 124567899999999999999999999999986
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=296.91 Aligned_cols=241 Identities=18% Similarity=0.233 Sum_probs=198.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCC-----eEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN-----EKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g-----~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
.|++.+.|| .|+++.||.|.....+ ..|++|.+... .....+.+|++.++.++||||+++++++
T Consensus 6 ~~~~~~~lg--------~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~ 77 (283)
T cd05048 6 AVRFLEELG--------EGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVC 77 (283)
T ss_pred Hcchhhccc--------CccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEE
Confidence 488899999 8999999999986655 78999988752 2345678999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCC
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLK------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTS 192 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~N 192 (852)
... ...|++|||+. +|.+++..... ....++...+..++.||+.||.||| +.+++||||||+|
T Consensus 78 ~~~--~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH-~~~i~H~dlkp~N 154 (283)
T cd05048 78 TKE--QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS-SHHFVHRDLAARN 154 (283)
T ss_pred cCC--CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccccccce
Confidence 887 88999999997 79988854211 1146788999999999999999999 8999999999999
Q ss_pred EEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc
Q psy3914 193 IFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS 271 (852)
Q Consensus 193 IlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~ 271 (852)
|+++.++.+||+|||++....... .........+++.|+|||.+.+..++.++|+|||||++|||++ |..||.+...
T Consensus 155 il~~~~~~~~L~dfg~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~ 232 (283)
T cd05048 155 CLVGEGLTVKISDFGLSRDIYSAD--YYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN 232 (283)
T ss_pred EEEcCCCcEEECCCcceeeccccc--cccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 999999999999999986432211 1111223345678999999877778899999999999999998 9989864321
Q ss_pred ------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 272 ------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 272 ------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
......+|..+.+++.+||+.||..||++.+++++++
T Consensus 233 ~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05048 233 QEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLR 281 (283)
T ss_pred HHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHh
Confidence 1223567899999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=304.04 Aligned_cols=238 Identities=17% Similarity=0.248 Sum_probs=199.0
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCC-CCCcceEeeeEEcC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLR-HPSILTFLDSVESP 129 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~ 129 (852)
|++.+.|| .|++|+||+|.++.+|+.||||++.+ ......+..|..+++.+. ||+|+++++++++.
T Consensus 2 f~~~~~lg--------~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~ 73 (323)
T cd05615 2 FNFLMVLG--------KGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV 73 (323)
T ss_pred ceEEEEEE--------ecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecC
Confidence 67888999 99999999999999999999999986 233456778888888886 57788899999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
..+|+||||+. +|..++. ..+.+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||
T Consensus 74 --~~~~lv~Ey~~~g~L~~~i~----~~~~l~~~~~~~i~~qi~~al~~lH-~~~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 74 --DRLYFVMEYVNGGDLMYHIQ----QVGKFKEPQAVFYAAEISVGLFFLH-RRGIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred --CEEEEEEcCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCCHHHeEECCCCCEEEeccc
Confidence 89999999998 6887773 2357899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcC
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNID 276 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~ 276 (852)
++...... ........||+.|+|||++.+..++.++|+|||||++|+|++|..||.+... ...+.
T Consensus 147 ~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~ 222 (323)
T cd05615 147 MCKEHMVD----GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 222 (323)
T ss_pred cccccCCC----CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc
Confidence 98643211 1112235688899999999777889999999999999999999999965432 12345
Q ss_pred CCChhHHHHHHHhccCCCCCCCCH-----HHHHHhhcCCCCCCcch
Q psy3914 277 NIPENLKRVYLELISERPNQRPNP-----ADFIMRNRKPGGYFKND 317 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~-----~elL~~l~~~~~fF~n~ 317 (852)
.++..+.+++.+||..+|.+|++. .++++| +||...
T Consensus 223 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h-----~~f~~~ 263 (323)
T cd05615 223 SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH-----AFFRRI 263 (323)
T ss_pred cCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC-----cccCCC
Confidence 788899999999999999999974 567665 888764
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=299.44 Aligned_cols=245 Identities=15% Similarity=0.207 Sum_probs=200.9
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcC--CCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG--SNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~--~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
+|++.+.|| .|+++.||.|..+. ++..|+||.+.. ......+.+|+.+++.++||||+++++++.
T Consensus 1 ~y~~~~~ig--------~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 72 (316)
T cd07842 1 KYEIEGCIG--------RGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFL 72 (316)
T ss_pred CceEEEEec--------cCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEe
Confidence 488999999 89999999999998 899999999987 344567889999999999999999999998
Q ss_pred cCCCCeEEEEEeecc-cHHHHHHhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc----CCcE
Q psy3914 128 SPSKSLVYLAVEYVE-PIFYHLDNTLKEN-NEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS----CGEW 201 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~-~L~~~L~~~~~~~-~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~----~g~~ 201 (852)
+.....+|+||||+. +|.+++....... ..+++..+..++.||+.||.||| +.+++||||+|+||+++. +|.+
T Consensus 73 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~h~dlkp~Nil~~~~~~~~~~~ 151 (316)
T cd07842 73 EHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH-SNWVLHRDLKPANILVMGEGPERGVV 151 (316)
T ss_pred CCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH-hCCEeeCCCCHHHEEEcCCCCccceE
Confidence 754578999999998 6777774333222 37899999999999999999999 899999999999999999 9999
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-------
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------- 273 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------- 273 (852)
||+|||++......... ........++..|+|||++.+ ..++.++|+|||||++|+|++|..||.+.....
T Consensus 152 kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~ 230 (316)
T cd07842 152 KIGDLGLARLFNAPLKP-LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQ 230 (316)
T ss_pred EECCCccccccCCCccc-ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhH
Confidence 99999998755332211 111223456788999998744 567889999999999999999999985332110
Q ss_pred --------------------------------------CcC------------CCChhHHHHHHHhccCCCCCCCCHHHH
Q psy3914 274 --------------------------------------NID------------NIPENLKRVYLELISERPNQRPNPADF 303 (852)
Q Consensus 274 --------------------------------------~~~------------~ip~~L~~li~~lL~~nP~~Rps~~el 303 (852)
... ..+..+.+++.+||..||++|||+.++
T Consensus 231 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~ei 310 (316)
T cd07842 231 RDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEA 310 (316)
T ss_pred HHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHH
Confidence 000 445678899999999999999999999
Q ss_pred HHhhcCCCCCC
Q psy3914 304 IMRNRKPGGYF 314 (852)
Q Consensus 304 L~~l~~~~~fF 314 (852)
+.| +||
T Consensus 311 l~~-----~~f 316 (316)
T cd07842 311 LEH-----PYF 316 (316)
T ss_pred hcC-----CCC
Confidence 997 887
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=300.36 Aligned_cols=241 Identities=15% Similarity=0.132 Sum_probs=192.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcC----------------CCeEEEEEEEeCCC---chHHHHHHHHHHHhC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG----------------SNEKVTIFLNDSAD---TYEPALSYVKKLKTL 114 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~----------------~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~L 114 (852)
.+|.+.+.|| .|++|.||+|.... ++..|+||++.... ....+.+|+++|+++
T Consensus 5 ~~~~~~~~lg--------~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l 76 (304)
T cd05096 5 GHLLFKEKLG--------EGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRL 76 (304)
T ss_pred hhCeeeeEec--------ccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhc
Confidence 4699999999 99999999997532 34579999987622 234678999999999
Q ss_pred CCCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhh---------------cCCCCCHHHHHHHHHHHHHHHHHH
Q psy3914 115 RHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLK---------------ENNEKKQIYISWGIFQITRALSFL 177 (852)
Q Consensus 115 rHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~---------------~~~~l~e~~i~~~l~QI~~aL~fL 177 (852)
+||||+++++++.+. +..|+||||+. +|.+++..... ....++...+..++.||+.||.||
T Consensus 77 ~h~niv~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l 154 (304)
T cd05096 77 KDPNIIRLLGVCVDE--DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYL 154 (304)
T ss_pred CCCCeeEEEEEEecC--CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 999999999999987 88999999997 79888853211 112467788899999999999999
Q ss_pred HhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHH
Q psy3914 178 INDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIW 257 (852)
Q Consensus 178 H~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~ 257 (852)
| +.+++||||||+|||++.++.+||+|||++........ ........++..|+|||++....++.++|+|||||++|
T Consensus 155 H-~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 231 (304)
T cd05096 155 S-SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY--YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLW 231 (304)
T ss_pred H-HCCccccCcchhheEEcCCccEEECCCccceecccCce--eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHH
Confidence 9 89999999999999999999999999999874422111 11112234567899999987777899999999999999
Q ss_pred HHHh--CCCCCCCCccc-------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 258 EVFN--GPLQSTNRKSL-------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 258 el~t--G~~pf~~~~~l-------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+|++ +..||.+.... .....+|..+.+++.+||..+|.+|||+.++...+
T Consensus 232 el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l 302 (304)
T cd05096 232 EILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFL 302 (304)
T ss_pred HHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHH
Confidence 9987 56677432111 12345788999999999999999999999997754
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=292.52 Aligned_cols=242 Identities=18% Similarity=0.253 Sum_probs=199.8
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhC-CCCCcceEeeeEEcC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTL-RHPSILTFLDSVESP 129 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~ 129 (852)
...+|++.+.+| .|+++.||.|.++.+++.|++|++.. ......+.+|+.+++.+ .||||+++++.+...
T Consensus 4 ~~~~y~~~~~l~--------~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 75 (275)
T cd06608 4 PTGIFELVEVIG--------EGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKK 75 (275)
T ss_pred chhheeheeeec--------CCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEec
Confidence 346799999999 89999999999999999999999987 33456789999999999 699999999998764
Q ss_pred C----CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 130 S----KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 130 ~----~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
. ...+|+||||+. +|.+++.........+++..+..++.|++.||.||| +.+++||||+|+||+++.++.+||
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH-~~~i~H~~l~p~ni~~~~~~~~~l 154 (275)
T cd06608 76 NPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH-ENKVIHRDIKGQNILLTKNAEVKL 154 (275)
T ss_pred CCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh-cCCcccCCCCHHHEEEccCCeEEE
Confidence 1 246899999998 688888544434567899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCcccc-----CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-----SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------ 272 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-----~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------ 272 (852)
+|||++....... .......++..|+|||++. ...++.++|+|||||++|+|++|..||......
T Consensus 155 ~d~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 230 (275)
T cd06608 155 VDFGVSAQLDSTL----GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKI 230 (275)
T ss_pred CCCccceecccch----hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHh
Confidence 9999986443211 1122345777999999863 234677899999999999999999999543211
Q ss_pred --------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 273 --------SNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 273 --------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.....++..+.+++.+||..||++|||+.++++|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 231 PRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred hccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1122367789999999999999999999999997
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=317.99 Aligned_cols=240 Identities=12% Similarity=0.153 Sum_probs=197.8
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
..+.|.+.+.|| .|++|.||+|.+..+++.|+||.... ....+|+++|++|+||||+++++++...
T Consensus 167 ~~~gy~i~~~Lg--------~G~~G~Vy~a~~~~~~~~vavK~~~~----~~~~~E~~iL~~L~HpnIv~l~~~~~~~-- 232 (461)
T PHA03211 167 AGLGFAIHRALT--------PGSEGCVFESSHPDYPQRVVVKAGWY----ASSVHEARLLRRLSHPAVLALLDVRVVG-- 232 (461)
T ss_pred ccCCeEEEEEEc--------cCCCeEEEEEEECCCCCEEEEecccc----cCHHHHHHHHHHCCCCCCCcEEEEEEEC--
Confidence 456799999999 99999999999999999999996543 3457899999999999999999999887
Q ss_pred CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
+..|+|||++. +|..++... ...+++..+..++.||+.||.||| ..||+||||||+|||++.++.+||+|||+++
T Consensus 233 ~~~~lv~e~~~~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~yLH-~~gIvHrDLKP~NILl~~~~~vkL~DFGla~ 308 (461)
T PHA03211 233 GLTCLVLPKYRSDLYTYLGAR---LRPLGLAQVTAVARQLLSAIDYIH-GEGIIHRDIKTENVLVNGPEDICLGDFGAAC 308 (461)
T ss_pred CEEEEEEEccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH-HCCEEECcCCHHHEEECCCCCEEEcccCCce
Confidence 88999999998 788777432 246899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-c------------------
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK-S------------------ 271 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~-~------------------ 271 (852)
......... ......||..|+|||++.+..++.++|||||||++|||++|..++.... .
T Consensus 309 ~~~~~~~~~--~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~ 386 (461)
T PHA03211 309 FARGSWSTP--FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQ 386 (461)
T ss_pred ecccccccc--cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhc
Confidence 543221111 1123568999999999988889999999999999999998764331100 0
Q ss_pred -----c-----------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 272 -----L-----------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 272 -----l-----------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
. .....++..+.++|++||..||.+|||+.++|+| +||++
T Consensus 387 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h-----p~f~~ 460 (461)
T PHA03211 387 VHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL-----PLFQS 460 (461)
T ss_pred cccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC-----cccCC
Confidence 0 0001344578899999999999999999999998 99975
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=297.90 Aligned_cols=237 Identities=16% Similarity=0.218 Sum_probs=202.4
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.+|++.+.+| .|+++.||.|.++.++..|+||.+.. ......+.+|+.+++.++||||+++++.+...
T Consensus 20 ~~y~~~~~lg--------~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~-- 89 (296)
T cd06654 20 KKYTRFEKIG--------QGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-- 89 (296)
T ss_pred cceeeEEEec--------CCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeC--
Confidence 5699999999 89999999999999999999999886 33456788999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
...|+||||+. +|.+++.. ..++..++..++.||+.||.||| +.+++||||+|+||+++.++.+||+|||++
T Consensus 90 ~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~i~~ql~~aL~~LH-~~gi~H~dLkp~Nill~~~~~~kl~dfg~~ 163 (296)
T cd06654 90 DELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLH-SNQVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (296)
T ss_pred CEEEEeecccCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEEcCCCCEEECccccc
Confidence 89999999998 68888732 45788899999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------ccCc
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------LSNI 275 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------l~~~ 275 (852)
....... .......+++.|+|||.+.+..++.++|+|||||++|+|++|..||..... ....
T Consensus 164 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T cd06654 164 AQITPEQ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP 239 (296)
T ss_pred hhccccc----cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCc
Confidence 7542211 111234577899999999777788999999999999999999999854322 1123
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
..++..+.+++.+||..+|..||++.+++.| +||.
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~-----~~~~ 274 (296)
T cd06654 240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQH-----QFLK 274 (296)
T ss_pred cccCHHHHHHHHHHCcCCcccCcCHHHHhhC-----hhhh
Confidence 4678889999999999999999999999997 6764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=297.28 Aligned_cols=236 Identities=20% Similarity=0.276 Sum_probs=204.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.|| .|+++.||.+.+..+++.|+||++.. ......+.+|+++++++.||||+++++++.+.
T Consensus 2 ~y~~~~~ig--------~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 73 (290)
T cd05580 2 DFEFIKTLG--------TGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDD 73 (290)
T ss_pred ceEEEEEee--------cCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcC
Confidence 589999999 89999999999999999999999976 23456688999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
..+|+||||+. +|.+++.. ...+++..+..++.||+.||.||| +.+++|+||+|.||+|+.+|.+||+|||
T Consensus 74 --~~~~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qil~~l~~lH-~~~i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 74 --SNLYLVMEYVPGGELFSHLRK----SGRFPEPVARFYAAQVVLALEYLH-SLDIVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred --CeEEEEEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCEecCCCCHHHEEECCCCCEEEeeCC
Confidence 89999999996 78888843 267899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcC
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNID 276 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~ 276 (852)
++...... .....+++.|+|||.+.+..++.++|+||||+++|+|++|..||.+... .....
T Consensus 147 ~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 219 (290)
T cd05580 147 FAKRVKGR-------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS 219 (290)
T ss_pred CccccCCC-------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCc
Confidence 98754322 1234577899999998777788899999999999999999999854321 12235
Q ss_pred CCChhHHHHHHHhccCCCCCCC-----CHHHHHHhhcCCCCCCcch
Q psy3914 277 NIPENLKRVYLELISERPNQRP-----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n~ 317 (852)
.++..+.+++.+||..+|.+|+ ++.+++.| +||...
T Consensus 220 ~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~-----~~~~~~ 260 (290)
T cd05580 220 FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH-----PWFAGI 260 (290)
T ss_pred cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC-----cccccC
Confidence 6788999999999999999999 88999987 898664
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >KOG0599|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=290.98 Aligned_cols=239 Identities=15% Similarity=0.240 Sum_probs=207.5
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----------CCchHHHHHHHHHHHhCC-CCCcceEe
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----------ADTYEPALSYVKKLKTLR-HPSILTFL 123 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----------~~~~~~~~~E~~~Lk~Lr-HPnIlk~~ 123 (852)
.|+-.+.+| .|...+|-++.++.+|..+++|+++. ....+..+.|+.+|+++. ||+|+++.
T Consensus 18 ~y~pkeilg--------rgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~ 89 (411)
T KOG0599|consen 18 KYEPKEILG--------RGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQ 89 (411)
T ss_pred hcChHHHhc--------ccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEee
Confidence 477788898 78889999999999999999999987 123345678899999985 99999999
Q ss_pred eeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcE
Q psy3914 124 DSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEW 201 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~ 201 (852)
|+++++ ..+++|+|.+. .|.++|. ..-.+++.....++.|+.+|+.||| ..+||||||||+||+++++-++
T Consensus 90 D~yes~--sF~FlVFdl~prGELFDyLt----s~VtlSEK~tR~iMrqlfegVeylH-a~~IVHRDLKpENILlddn~~i 162 (411)
T KOG0599|consen 90 DVYESD--AFVFLVFDLMPRGELFDYLT----SKVTLSEKETRRIMRQLFEGVEYLH-ARNIVHRDLKPENILLDDNMNI 162 (411)
T ss_pred eeccCc--chhhhhhhhcccchHHHHhh----hheeecHHHHHHHHHHHHHHHHHHH-HhhhhhcccChhheeeccccce
Confidence 999988 99999999999 6999994 3467899999999999999999999 9999999999999999999999
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccc------cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-----
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENS------LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK----- 270 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~------~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~----- 270 (852)
||+|||+++.+. +......++|||.|.|||.+ ....|+..+|+|++|+++|.|+.|.+||....
T Consensus 163 ~isDFGFa~~l~-----~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlML 237 (411)
T KOG0599|consen 163 KISDFGFACQLE-----PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLML 237 (411)
T ss_pred EEeccceeeccC-----CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHH
Confidence 999999998653 34456678999999999996 45678889999999999999999999995332
Q ss_pred --------ccc--CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchH
Q psy3914 271 --------SLS--NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 271 --------~l~--~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~l 318 (852)
+.. ...+++...+++|.+||..||.+|.|+.+.|.| +||....
T Consensus 238 R~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH-----pff~q~~ 290 (411)
T KOG0599|consen 238 RMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH-----PFFIQIA 290 (411)
T ss_pred HHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC-----hHHHHHH
Confidence 222 346889999999999999999999999999998 8885543
|
|
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=293.89 Aligned_cols=234 Identities=12% Similarity=0.192 Sum_probs=197.4
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC--CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA--DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.+|++.+.|| .|+++.||.|++..+++.|+||++... .....+.+|+.+++.++||||+++++.+...
T Consensus 9 ~~~~~~~~lg--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~-- 78 (267)
T cd06645 9 EDFELIQRIG--------SGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR-- 78 (267)
T ss_pred HHHHHHHHhC--------CCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC--
Confidence 4689999999 999999999999999999999998762 3345678899999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+|+||||+. +|.+++.. .+.+++..+..++.||+.||.||| +.+++|+||+|+||+++.+|.+||+|||++
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dlkp~nili~~~~~~~l~dfg~~ 153 (267)
T cd06645 79 DKLWICMEFCGGGSLQDIYHV----TGPLSESQIAYVSRETLQGLYYLH-SKGKMHRDIKGANILLTDNGHVKLADFGVS 153 (267)
T ss_pred CEEEEEEeccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHEEECCCCCEEECcceee
Confidence 89999999998 78888742 357899999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCcccc---CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSL---SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------------- 272 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------------- 272 (852)
...... ........|+..|+|||++. ...++.++|+|||||++|+|++|..||......
T Consensus 154 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~ 229 (267)
T cd06645 154 AQITAT----IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPP 229 (267)
T ss_pred eEccCc----ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCC
Confidence 654321 11122346788999999973 455788999999999999999999887432110
Q ss_pred --cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 273 --SNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 273 --~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.....++..+.+++.+||..+|++||++.++++|
T Consensus 230 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 230 KLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred cccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 1112467889999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=297.51 Aligned_cols=243 Identities=18% Similarity=0.228 Sum_probs=198.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCC-CCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLR-HPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~ 129 (852)
+|++.+.|| .|+++.||+|.++.+|+.|+||++.. ......+.+|+.+++.++ ||||+++++++...
T Consensus 2 ~y~~~~~lg--------~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~ 73 (295)
T cd07837 2 AYEKLEKIG--------EGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVE 73 (295)
T ss_pred CceEeeEec--------ccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeec
Confidence 589999999 89999999999999999999999876 223456788999999996 69999999998765
Q ss_pred C---CCeEEEEEeecc-cHHHHHHhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc-CCcEEE
Q psy3914 130 S---KSLVYLAVEYVE-PIFYHLDNTLKE-NNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS-CGEWKL 203 (852)
Q Consensus 130 ~---~~~~yIVtE~v~-~L~~~L~~~~~~-~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~-~g~~KL 203 (852)
. +..+|+||||+. +|.+++...... ...+++..+..++.||+.||.||| +.+++||||+|+||+++. ++.+||
T Consensus 74 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH-~~~i~H~dl~~~nil~~~~~~~~kl 152 (295)
T cd07837 74 EKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH-KHGVMHRDLKPQNLLVDKQKGLLKI 152 (295)
T ss_pred CCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecCCChHHEEEecCCCeEEE
Confidence 1 123899999999 788877543222 346899999999999999999999 899999999999999999 899999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc---------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--------- 273 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--------- 273 (852)
+|||++..+.. +........+++.|+|||++ ....++.++|+|||||++|+|++|..||.+.....
T Consensus 153 ~dfg~~~~~~~----~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~ 228 (295)
T cd07837 153 ADLGLGRAFSI----PVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLL 228 (295)
T ss_pred eecccceecCC----CccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 99999874322 11112223456789999987 44567889999999999999999999885432110
Q ss_pred ------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 274 ------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 274 ------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
....++..+.++|.+||..||.+||++.+++.| +||+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~-----~~~~ 295 (295)
T cd07837 229 GTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH-----PYFD 295 (295)
T ss_pred CCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC-----CCcC
Confidence 013578889999999999999999999999997 8884
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >KOG4717|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=305.50 Aligned_cols=237 Identities=16% Similarity=0.277 Sum_probs=207.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
=|.+.+.|| +|-|..|-.|++.-+|+.||||++++ .-....+..|++.|+.++||||+++|+++.+.
T Consensus 19 LYDLekTlG--------~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ- 89 (864)
T KOG4717|consen 19 LYDLEKTLG--------RGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ- 89 (864)
T ss_pred eehhhhhhc--------CCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc-
Confidence 399999999 99999999999999999999999998 33455788999999999999999999999988
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc-CCcEEEcccc
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS-CGEWKLGGLE 207 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~-~g~~KL~DFg 207 (852)
..+|+|.|.-. +|++|+- +.+..+.+...+.++.||+.|+.|+| +.++|||||||+||++-+ -|-+||.|||
T Consensus 90 -TKlyLiLELGD~GDl~DyIm---KHe~Gl~E~La~kYF~QI~~AI~YCH-qLHVVHRDLKPENVVFFEKlGlVKLTDFG 164 (864)
T KOG4717|consen 90 -TKLYLILELGDGGDLFDYIM---KHEEGLNEDLAKKYFAQIVHAISYCH-QLHVVHRDLKPENVVFFEKLGLVKLTDFG 164 (864)
T ss_pred -ceEEEEEEecCCchHHHHHH---hhhccccHHHHHHHHHHHHHHHHHHh-hhhhhcccCCcceeEEeeecCceEeeecc
Confidence 89999999987 7999985 34578999999999999999999999 999999999999987765 7999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCC-cchhHHhHHHHHHHHHhCCCCCCCCccc-----------cCc
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTK-CSTDMYGLGILIWEVFNGPLQSTNRKSL-----------SNI 275 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~-~~sDIwSLG~ll~el~tG~~pf~~~~~l-----------~~~ 275 (852)
|+..+ .|...+...+|+..|.|||++.+..|+ +++||||||+|+|.|..|++||...+.- ..+
T Consensus 165 FSNkf-----~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvP 239 (864)
T KOG4717|consen 165 FSNKF-----QPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVP 239 (864)
T ss_pred ccccC-----CCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCc
Confidence 98543 556667788999999999999666554 6899999999999999999999643222 234
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
..++++.+++|..||..+|++|.+.++|..+ +|++
T Consensus 240 shvS~eCrdLI~sMLvRdPkkRAslEeI~s~-----~Wlq 274 (864)
T KOG4717|consen 240 SHVSKECRDLIQSMLVRDPKKRASLEEIVST-----SWLQ 274 (864)
T ss_pred hhhhHHHHHHHHHHHhcCchhhccHHHHhcc-----cccc
Confidence 6678899999999999999999999999986 6664
|
|
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=303.97 Aligned_cols=241 Identities=14% Similarity=0.195 Sum_probs=193.1
Q ss_pred EeccccCCCCCCcccC--CceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 58 VGEPAVSFSGCFTQKH--TFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 58 i~e~Ig~~~g~~~~~G--s~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
+.+.|| .| ++++||.++++.+|+.|+||+++.. .....+.+|+.+++.++||||+++++++..+
T Consensus 2 ~~~~ig--------~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~-- 71 (327)
T cd08227 2 LLTVIG--------RGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD-- 71 (327)
T ss_pred hhhhcc--------ccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC--
Confidence 456777 44 7899999999999999999999862 2345788899999999999999999999988
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+.+|+||||+. +|.+++.... ...+++..+++++.||+.||.||| +.+++||||||+||+++.++.++|+||+..
T Consensus 72 ~~~~lv~e~~~~~~l~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH-~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~ 148 (327)
T cd08227 72 NELWVVTSFMAYGSAKDLICTHF--MDGMSELAIAYILQGVLKALDYIH-HMGYVHRSVKASHILISVDGKVYLSGLRSN 148 (327)
T ss_pred CEEEEEEeccCCCcHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHH-HCCEecCCCChhhEEEecCCcEEEcccchh
Confidence 89999999998 6888884321 245889999999999999999999 899999999999999999999999999876
Q ss_pred hccccccC---CCCcccccccCCCcccCCccccC--CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-----------
Q psy3914 210 EKISEASC---IPMKRYSRYEDQSTYQIPENSLS--HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS----------- 273 (852)
Q Consensus 210 ~~~~~~~~---~~~~~~~~~~gt~~Y~APE~~~~--~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~----------- 273 (852)
........ ..........++..|+|||++.+ ..++.++|||||||++|+|++|..||.......
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 228 (327)
T cd08227 149 LSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVP 228 (327)
T ss_pred hccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCcc
Confidence 53321110 00001112345668999999854 468899999999999999999999985321000
Q ss_pred ----------------------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 274 ----------------------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 274 ----------------------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
....+++.+.+++++||..||.+|||+.++++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~- 307 (327)
T cd08227 229 CLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH- 307 (327)
T ss_pred ccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC-
Confidence 001245678999999999999999999999997
Q ss_pred cCCCCCCcc
Q psy3914 308 RKPGGYFKN 316 (852)
Q Consensus 308 ~~~~~fF~n 316 (852)
+||++
T Consensus 308 ----p~f~~ 312 (327)
T cd08227 308 ----SFFKQ 312 (327)
T ss_pred ----hhhhh
Confidence 88865
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=297.73 Aligned_cols=237 Identities=16% Similarity=0.216 Sum_probs=203.0
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.+|++.+.|| .|+++.||+|.++.+++.|+||.+.. ....+.+.+|+.+++.++||||+++++.+...
T Consensus 19 ~~y~~~~~lg--------~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-- 88 (297)
T cd06656 19 KKYTRFEKIG--------QGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-- 88 (297)
T ss_pred hhceeeeeec--------cCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC--
Confidence 4699999999 89999999999999999999999976 33446788999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+|+||||+. +|.+++.+ ..+++..+..++.|++.||.||| +.+++||||+|+||+++.+|.++|+|||++
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH-~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~ 162 (297)
T cd06656 89 DELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALDFLH-SNQVIHRDIKSDNILLGMDGSVKLTDFGFC 162 (297)
T ss_pred CEEEEeecccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEECCCCCEEECcCccc
Confidence 89999999998 68888732 45788899999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------cCc
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------SNI 275 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------~~~ 275 (852)
....... .......+++.|+|||.+.+..++.++|+|||||++|+|++|..||.+.... ...
T Consensus 163 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (297)
T cd06656 163 AQITPEQ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP 238 (297)
T ss_pred eEccCCc----cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCc
Confidence 7543211 1112345777999999997777889999999999999999999998543221 123
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
..++..+.+++.+||..+|..||++.++++| +||.
T Consensus 239 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~-----~~~~ 273 (297)
T cd06656 239 ERLSAVFRDFLNRCLEMDVDRRGSAKELLQH-----PFLK 273 (297)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcC-----chhc
Confidence 4677889999999999999999999999997 7875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=292.48 Aligned_cols=241 Identities=17% Similarity=0.226 Sum_probs=200.5
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC--------chHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD--------TYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~--------~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
+|++++.|| .|+++.||.|..+.+++.|++|++.... ....+++|++.+++++||||+++++++
T Consensus 1 ~~~~~~~lg--------~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 72 (268)
T cd06630 1 EWLKGQQLG--------TGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGAT 72 (268)
T ss_pred Cccccceec--------CcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhcee
Confidence 488899999 8999999999999999999999987621 346788999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC-cEEE
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG-EWKL 203 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g-~~KL 203 (852)
.+. ..+++|+||+. +|.+++.+ ...+++..+..++.||+.||.||| +.+++|+||+|+||+++.+| .+||
T Consensus 73 ~~~--~~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~al~~LH-~~~i~H~~i~~~nil~~~~~~~~~l 145 (268)
T cd06630 73 CED--SHFNLFVEWMAGGSVSHLLSK----YGAFKEAVIINYTEQLLRGLSYLH-ENQIIHRDVKGANLLIDSTGQRLRI 145 (268)
T ss_pred ccC--CeEEEEEeccCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEEcCCCCEEEE
Confidence 987 89999999998 68888843 256889999999999999999999 89999999999999998876 5999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----------- 272 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----------- 272 (852)
+|||++..................++..|+|||++.+..++.++|+|||||++|+|++|..||......
T Consensus 146 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~ 225 (268)
T cd06630 146 ADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIAS 225 (268)
T ss_pred cccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhc
Confidence 999998755332110011112245678999999997777889999999999999999999998533211
Q ss_pred -----cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 273 -----SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 273 -----~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
.....+++.+.+++.+||..+|..||++.++++| +||.
T Consensus 226 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~-----~~~~ 268 (268)
T cd06630 226 ATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH-----PVFR 268 (268)
T ss_pred cCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC-----cccC
Confidence 1123467889999999999999999999999997 8874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=304.75 Aligned_cols=241 Identities=12% Similarity=0.156 Sum_probs=199.8
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.|| .|++|.||.++.+.+++.|+||++.+ ......+.+|+.+++.++||||++++++++++
T Consensus 2 ~y~~~~~lG--------~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 73 (331)
T cd05597 2 DFEILKVIG--------RGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDE 73 (331)
T ss_pred CceEEEEEE--------ecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecC
Confidence 599999999 99999999999999999999999975 23445678899999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
.++|+||||+. +|.+++.+ ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||
T Consensus 74 --~~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~dlkp~Nill~~~~~~kl~Dfg 147 (331)
T cd05597 74 --NNLYLVMDYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVLAIDSVH-QLGYVHRDIKPDNVLLDKNGHIRLADFG 147 (331)
T ss_pred --CeEEEEEecCCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHH-hCCeEECCCCHHHEEECCCCCEEEEECC
Confidence 89999999997 78888843 2356899999999999999999999 9999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCcccc-----CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSL-----SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------- 272 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-----~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------- 272 (852)
++..+..... .......||+.|+|||++. ...++.++|+|||||++|+|++|..||.+....
T Consensus 148 ~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~ 224 (331)
T cd05597 148 SCLRLLADGT---VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK 224 (331)
T ss_pred ceeecCCCCC---ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCC
Confidence 9865432111 1111245888999999984 245678899999999999999999999653211
Q ss_pred ------cCcCCCChhHHHHHHHhccCCCCC--CCCHHHHHHhhcCCCCCCcch
Q psy3914 273 ------SNIDNIPENLKRVYLELISERPNQ--RPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 ------~~~~~ip~~L~~li~~lL~~nP~~--Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....+|..+++++++||...+++ |+++.++++| +||.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h-----p~~~~~ 272 (331)
T cd05597 225 EHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH-----PFFEGI 272 (331)
T ss_pred CcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC-----CCCCCC
Confidence 112347889999999998654443 7899999998 899764
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=299.94 Aligned_cols=242 Identities=18% Similarity=0.240 Sum_probs=199.1
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
..|++.+.|| .|+++.||+|.++.+|+.|++|++... .......+|+.++++++||||+++++++...
T Consensus 7 ~~y~~~~~ig--------~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 78 (309)
T cd07845 7 TEFEKLNRIG--------EGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK 78 (309)
T ss_pred cceeEeeeee--------ecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC
Confidence 4599999999 899999999999999999999998752 2223467899999999999999999999765
Q ss_pred CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 130 SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 130 ~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+.+|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.+||+|||+
T Consensus 79 ~~~~~~lv~e~~~~~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p~nil~~~~~~~kL~dfg~ 154 (309)
T cd07845 79 HLDSIFLVMEYCEQDLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLH-ENFIIHRDLKVSNLLLTDKGCLKIADFGL 154 (309)
T ss_pred CCCeEEEEEecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEECCCCCEEECccce
Confidence 4467999999999 788887432 256899999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc--------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS-------------- 273 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~-------------- 273 (852)
+....... .......++..|+|||++. ...++.++|+|||||++|+|++|..||.+.....
T Consensus 155 ~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 230 (309)
T cd07845 155 ARTYGLPA----KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNE 230 (309)
T ss_pred eeecCCcc----CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 87543211 1111233466899999984 4567889999999999999999999885332110
Q ss_pred ---------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 ---------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ---------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++++||..||++||++.+++.| +||..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h-----~~f~~ 295 (309)
T cd07845 231 SIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES-----SYFKE 295 (309)
T ss_pred hhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC-----hhhcc
Confidence 012257788999999999999999999999997 88864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=297.66 Aligned_cols=241 Identities=19% Similarity=0.245 Sum_probs=199.7
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC-------chHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD-------TYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~-------~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
+|++.+.|| .|+++.||+|.++.+|+.|+||.+.... ....+.+|+++++.++||||+++++++.
T Consensus 1 ~y~~~~~lg--------~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~ 72 (298)
T cd07841 1 RYEKGKKLG--------EGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFG 72 (298)
T ss_pred Cceeeeeee--------eccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheee
Confidence 488999999 8999999999999999999999997621 2345678999999999999999999999
Q ss_pred cCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 128 SPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
+. ..+|+||||+. +|..++... ...+++..+..++.||++||.||| +.+++||||+|+||+++.+|.++|+||
T Consensus 73 ~~--~~~~lv~e~~~~~L~~~i~~~---~~~~~~~~~~~~~~qi~~al~~lH-~~~i~H~dl~p~nill~~~~~~~l~df 146 (298)
T cd07841 73 HK--SNINLVFEFMETDLEKVIKDK---SIVLTPADIKSYMLMTLRGLEYLH-SNWILHRDLKPNNLLIASDGVLKLADF 146 (298)
T ss_pred cC--CEEEEEEcccCCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHH-hCCeeecCCChhhEEEcCCCCEEEccc
Confidence 87 89999999998 688887421 136899999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------ 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------ 273 (852)
|++....... .......++..|+|||.+ ....++.++|+|||||++|+|++|.++|.+.....
T Consensus 147 g~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~ 222 (298)
T cd07841 147 GLARSFGSPN----RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTP 222 (298)
T ss_pred eeeeeccCCC----ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCC
Confidence 9987543221 111223456689999998 44567889999999999999999977764332110
Q ss_pred ---------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchH
Q psy3914 274 ---------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 274 ---------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~l 318 (852)
....++..+.+++.+||..+|..||++.+++.| +||.+..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~-----~~~~~~~ 289 (298)
T cd07841 223 TEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH-----PYFSNDP 289 (298)
T ss_pred chhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC-----ccccCCC
Confidence 113457789999999999999999999999997 8998753
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=299.93 Aligned_cols=244 Identities=16% Similarity=0.227 Sum_probs=204.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
+|++.+.|| .|++++||.|....+++.|+||.+... .....+.+|++.++.++||||+++++.+++.
T Consensus 2 ~y~~~~~ig--------~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 73 (316)
T cd05574 2 HFKKIKLLG--------KGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTE 73 (316)
T ss_pred ceEEeeeec--------CCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecC
Confidence 589999999 899999999999999999999999872 2445688999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
...|+||||+. +|.+++.+. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.++|+|||
T Consensus 74 --~~~~lv~e~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~Nili~~~~~~~l~dfg 148 (316)
T cd05574 74 --TYLCLVMDYCPGGELFRLLQRQ--PGKCLSEEVARFYAAEVLLALEYLH-LLGIVYRDLKPENILLHESGHIMLSDFD 148 (316)
T ss_pred --CEEEEEEEecCCCCHHHHHHhC--CCCccCHHHHHHHHHHHHHHHHHHH-HCCeeccCCChHHeEEcCCCCEEEeecc
Confidence 89999999997 788887422 2356899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCC-------------------------CcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhC
Q psy3914 208 YMEKISEASCIP-------------------------MKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG 262 (852)
Q Consensus 208 ~a~~~~~~~~~~-------------------------~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG 262 (852)
++.......... ........|+..|+|||++.+..++.++|||||||++|+|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g 228 (316)
T cd05574 149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228 (316)
T ss_pred hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhC
Confidence 987442211100 0011234678899999999777788999999999999999999
Q ss_pred CCCCCCCccc-------------cCcCCCChhHHHHHHHhccCCCCCCCC----HHHHHHhhcCCCCCCcc
Q psy3914 263 PLQSTNRKSL-------------SNIDNIPENLKRVYLELISERPNQRPN----PADFIMRNRKPGGYFKN 316 (852)
Q Consensus 263 ~~pf~~~~~l-------------~~~~~ip~~L~~li~~lL~~nP~~Rps----~~elL~~l~~~~~fF~n 316 (852)
..||.+.... .....++..+.+++.+||..+|.+||+ +.+++.| +||++
T Consensus 229 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~-----~~~~~ 294 (316)
T cd05574 229 TTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH-----PFFRG 294 (316)
T ss_pred CCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC-----chhhc
Confidence 9999544211 112236889999999999999999999 9999987 88865
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=299.77 Aligned_cols=237 Identities=14% Similarity=0.179 Sum_probs=200.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.|++.+.|| .|+++.||+|.+..++..|++|.+... .....+.+|+++++.++||||+++++.+.++
T Consensus 2 ~~~~~~~lg--------~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 71 (308)
T cd06615 2 DFEKLGELG--------AGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD-- 71 (308)
T ss_pred CceEEeecc--------CCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC--
Confidence 489999999 999999999999999999999998762 2234578899999999999999999999988
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+.+|+||||+. +|.+++.+ ...+++..+..++.||+.||.|||+.++++|+||+|+||+++.+|.+||+|||++
T Consensus 72 ~~~~lv~ey~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (308)
T cd06615 72 GEISICMEHMDGGSLDQVLKK----AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 147 (308)
T ss_pred CEEEEEeeccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCc
Confidence 89999999997 79888843 2568899999999999999999994479999999999999999999999999997
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc----------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---------------- 273 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---------------- 273 (852)
...... ......++..|+|||++.+..++.++|+|||||++|+|++|..||.......
T Consensus 148 ~~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 221 (308)
T cd06615 148 GQLIDS------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKE 221 (308)
T ss_pred cccccc------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccC
Confidence 643221 1123467789999999877778889999999999999999998874221000
Q ss_pred ---------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 ---------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ---------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....++..+.+++.+||..+|++||++.+++.| +||.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~-----~~~~~ 292 (308)
T cd06615 222 SHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH-----PFIKR 292 (308)
T ss_pred CcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC-----hhhhh
Confidence 001256789999999999999999999999997 88865
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=294.89 Aligned_cols=238 Identities=15% Similarity=0.198 Sum_probs=199.3
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC--CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA--DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
|++.+.|| .|+++.||+|.+..++..+++|.+... .....+.+|+++++.++||||+++++.+... ..
T Consensus 7 ~~i~~~lg--------~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~--~~ 76 (282)
T cd06643 7 WEIIGELG--------DGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE--NN 76 (282)
T ss_pred HHHHhhcc--------cCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC--CE
Confidence 78888999 899999999999999999999999762 2345678899999999999999999999987 89
Q ss_pred EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 134 VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 134 ~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
.|+|+||+. +|..++.+ ....+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.+||+|||++..
T Consensus 77 ~~~v~e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~qi~~~L~~LH-~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~ 152 (282)
T cd06643 77 LWILIEFCAGGAVDAVMLE---LERPLTEPQIRVVCKQTLEALNYLH-ENKIIHRDLKAGNILFTLDGDIKLADFGVSAK 152 (282)
T ss_pred EEEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecCCCcccEEEccCCCEEEcccccccc
Confidence 999999998 57666632 2356899999999999999999999 89999999999999999999999999999864
Q ss_pred cccccCCCCcccccccCCCcccCCccc-----cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------c
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENS-----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------L 272 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~-----~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------l 272 (852)
.... ........++..|+|||++ .+..++.++|+|||||++|+|++|..||..... .
T Consensus 153 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd06643 153 NTRT----IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL 228 (282)
T ss_pred cccc----ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCC
Confidence 3221 1112234578899999997 244567789999999999999999999854321 1
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....++..+.+++.+||+.+|.+||++.++++| +||..
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~-----~~~~~ 267 (282)
T cd06643 229 AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH-----PFVTV 267 (282)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC-----CCEec
Confidence 1234678899999999999999999999999997 88853
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=298.70 Aligned_cols=239 Identities=18% Similarity=0.258 Sum_probs=197.3
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
.|++.+.|| .|+++.||+|+.+.+++.|+||.+.. ......+.+|+.++++++||||+++++++....
T Consensus 6 ~y~~~~~lg--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 77 (293)
T cd07843 6 EYEKLNRIE--------EGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSN 77 (293)
T ss_pred hhhhhhhhc--------CCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC
Confidence 589999999 89999999999999999999999976 222335678999999999999999999987654
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
....|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++|+||+|+||+++.+|.+||+|||++
T Consensus 78 ~~~~~lv~e~~~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH-~~~i~H~dl~p~nili~~~~~~~l~d~g~~ 153 (293)
T cd07843 78 LDKIYMVMEYVEHDLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHLH-DNWILHRDLKTSNLLLNNRGILKICDFGLA 153 (293)
T ss_pred CCcEEEEehhcCcCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeccCCHHHEEECCCCcEEEeecCce
Confidence 478999999998 788877432 236899999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------- 272 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------- 272 (852)
....... .......+++.|+|||.+.+ ..++.++|+|||||++|+|++|..||.+....
T Consensus 154 ~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 229 (293)
T cd07843 154 REYGSPL----KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEK 229 (293)
T ss_pred eeccCCc----cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchH
Confidence 7543321 11223446778999999843 44678999999999999999999888532110
Q ss_pred -------------------------cCcCC--CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 -------------------------SNIDN--IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 -------------------------~~~~~--ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
..+.. +++.+.+++++||+.+|++||++.+++.| +||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~-----~~f 293 (293)
T cd07843 230 IWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH-----PYF 293 (293)
T ss_pred HHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC-----CCC
Confidence 00111 47889999999999999999999999997 787
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=295.92 Aligned_cols=241 Identities=14% Similarity=0.223 Sum_probs=202.1
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC--CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA--DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.+|++.+.|| .|+++.||+|....++..|++|++... ...+.+.+|+++++.++||||+++++.+...
T Consensus 5 ~~~~i~~~l~--------~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 74 (280)
T cd06611 5 DIWEIIGELG--------DGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYE-- 74 (280)
T ss_pred hHHHHHHHhc--------CCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC--
Confidence 3599999999 899999999999989999999998762 2345678899999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+|+||||+. +|..++.+. ...+++..++.++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh-~~~i~h~dl~p~nili~~~~~~~l~d~g~~ 150 (280)
T cd06611 75 NKLWILIEFCDGGALDSIMLEL---ERGLTEPQIRYVCRQMLEALNFLH-SHKVIHRDLKAGNILLTLDGDVKLADFGVS 150 (280)
T ss_pred CeEEEEeeccCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCChhhEEECCCCCEEEccCccc
Confidence 89999999998 688887432 246899999999999999999999 899999999999999999999999999987
Q ss_pred hccccccCCCCcccccccCCCcccCCcccc-----CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSL-----SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS------------- 271 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-----~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------------- 271 (852)
...... ........++..|++||++. ...++.++|+|||||++|+|++|..||.+...
T Consensus 151 ~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 226 (280)
T cd06611 151 AKNKST----LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPP 226 (280)
T ss_pred hhhccc----ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCC
Confidence 643221 11112345778999999973 34467789999999999999999999854322
Q ss_pred -ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 272 -LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 272 -l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
+.....++..+.+++.+||..+|.+||++.++++| +||.+.
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~-----~~~~~~ 268 (280)
T cd06611 227 TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH-----PFVSDQ 268 (280)
T ss_pred CcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC-----hhhccc
Confidence 12234678899999999999999999999999997 888654
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=292.79 Aligned_cols=238 Identities=15% Similarity=0.202 Sum_probs=195.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEc---CCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK---GSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k---~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
...|++++.|| .|+||.||+|+.+ ..+..|++|+++.. .....+.+|+..++.++||||+++++++
T Consensus 4 ~~~~~~~~~ig--------~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 75 (266)
T cd05064 4 NKSIKIERILG--------TGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVI 75 (266)
T ss_pred hHHeEEeeeec--------ccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEE
Confidence 34699999999 9999999999865 34679999998863 2234678899999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
... ...|+||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+
T Consensus 76 ~~~--~~~~lv~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~i~~al~~lH-~~~iiH~dikp~nili~~~~~~~l~ 149 (266)
T cd05064 76 TRG--NTMMIVTEYMSNGALDSFLRK---HEGQLVAGQLMGMLPGLASGMKYLS-EMGYVHKGLAAHKVLVNSDLVCKIS 149 (266)
T ss_pred ecC--CCcEEEEEeCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHH-HCCEeeccccHhhEEEcCCCcEEEC
Confidence 877 89999999998 68888843 2357889999999999999999999 9999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------ 271 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------ 271 (852)
|||.+....... ........++..|+|||++.+..++.++|||||||++||+++ |..||.+...
T Consensus 150 dfg~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~ 226 (266)
T cd05064 150 GFRRLQEDKSEA---IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFR 226 (266)
T ss_pred CCcccccccccc---hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC
Confidence 999865321111 111112234568999999977888899999999999999875 9999854321
Q ss_pred ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
...+..+|..+.+++.+||..+|..||++.++++.+
T Consensus 227 ~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l 262 (266)
T cd05064 227 LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSIL 262 (266)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHH
Confidence 123456889999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-32 Score=289.64 Aligned_cols=239 Identities=13% Similarity=0.205 Sum_probs=199.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
..|++.+.|| .|+++.||+|..+.++..|++|++... .....+.+|++.++.++||||+++++.+..+ .
T Consensus 6 ~~~~~~~~ig--------~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~ 75 (263)
T cd05052 6 TDITMKHKLG--------GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--P 75 (263)
T ss_pred HHeEEeeecC--------CcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCC--C
Confidence 3488999999 899999999999999999999998762 2345688999999999999999999999887 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
.+|+||||+. +|.+++... ....++...+.+++.|++.||.||| +.+++||||||+||++++++.+||+|||++.
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH-~~~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 76 PFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE-KKNFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred CcEEEEEeCCCCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHH-hCCEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 8999999997 788888432 2346888999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCc------------cccCcCC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRK------------SLSNIDN 277 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~------------~l~~~~~ 277 (852)
....... ........+..|+|||.+.+..++.++|+|||||++|||++ |..||.+.. .......
T Consensus 153 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 229 (263)
T cd05052 153 LMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEG 229 (263)
T ss_pred cccccee---eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Confidence 5433211 11111223457999999877788899999999999999998 888885421 1223457
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
+|..+.+++.+||..+|.+||++.++++.++
T Consensus 230 ~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~ 260 (263)
T cd05052 230 CPPKVYELMRACWQWNPSDRPSFAEIHQAFE 260 (263)
T ss_pred CCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 8899999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-32 Score=287.21 Aligned_cols=240 Identities=21% Similarity=0.286 Sum_probs=201.8
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.+| .|+++.||+|.+..++..|++|++.. ....+.+.+|+++++.++||||+++++.+....
T Consensus 1 ~y~~~~~lg--------~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 72 (265)
T cd08217 1 DYEVLETIG--------KGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRS 72 (265)
T ss_pred Cceeeeeec--------cCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCC
Confidence 488999999 89999999999999999999999875 223456788999999999999999999876544
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHH----hcCCceecccCCCCEEEccCCcEEEc
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLI----NDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH----~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
+..+|++|||+. +|.+++.........+++..+..++.||+.||.||| .+.+++|+||+|+||+++.++.+||+
T Consensus 73 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~ 152 (265)
T cd08217 73 NQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLG 152 (265)
T ss_pred CCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEe
Confidence 467999999998 799998655455678899999999999999999999 24679999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc------------c
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS------------L 272 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------------l 272 (852)
|||++........ ......+++.|+|||++.+..++.++|+||||+++|+|++|..||..... .
T Consensus 153 d~g~~~~~~~~~~----~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 228 (265)
T cd08217 153 DFGLAKILGHDSS----FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFR 228 (265)
T ss_pred cccccccccCCcc----cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCC
Confidence 9999875432211 11234577899999999777788899999999999999999999854321 1
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.....++..+.+++.+||..+|..||++.++++|
T Consensus 229 ~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 229 RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1234677899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=288.24 Aligned_cols=239 Identities=18% Similarity=0.225 Sum_probs=201.5
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
+|++.+.|| .|+++.||+|..+.+|+.|++|.+.. ......+.+|++++++++||||+++++.+...
T Consensus 3 ~y~~~~~lg--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~ 74 (267)
T cd08224 3 NFKIEKKIG--------KGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN 74 (267)
T ss_pred ceeeeeeec--------cCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC
Confidence 599999999 89999999999999999999998864 22356788999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+..|+||||+. +|..++.........+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.++|+|||
T Consensus 75 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh-~~~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 75 --NELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH-SKRIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred --CeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH-hCCEecCCcChhhEEECCCCcEEEeccc
Confidence 89999999998 799888654444566899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-c-------------c
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-L-------------S 273 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-l-------------~ 273 (852)
++........ ......++..|+|||.+.+..++.++|+|||||++|+|++|..||..... . .
T Consensus 152 ~~~~~~~~~~----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 227 (267)
T cd08224 152 LGRFFSSKTT----AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPP 227 (267)
T ss_pred eeeeccCCCc----ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCC
Confidence 9764422111 11234567789999999777888999999999999999999999843311 0 0
Q ss_pred Cc-CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 274 NI-DNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 274 ~~-~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
.+ ..++..+.+++.+||..+|..||++.++++.+.
T Consensus 228 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~ 263 (267)
T cd08224 228 LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAK 263 (267)
T ss_pred CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHH
Confidence 11 256778999999999999999999999988653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=291.29 Aligned_cols=241 Identities=17% Similarity=0.260 Sum_probs=199.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCC-
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTL-RHPSILTFLDSVESPS- 130 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~- 130 (852)
..|++.+.|| .|+++.||.|..+.+++.|+||++.. ......+.+|+.+++.+ +||||+++++.+....
T Consensus 6 ~~y~~~~~lg--------~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 77 (272)
T cd06637 6 GIFELVELVG--------NGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 77 (272)
T ss_pred hhhhHHHhee--------ecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCC
Confidence 4588999999 89999999999999999999999977 34456788999999998 6999999999987531
Q ss_pred ---CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 131 ---KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 131 ---~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
...+|+||||+. +|.+++... ....+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.+||+|
T Consensus 78 ~~~~~~~~iv~e~~~~~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~LH-~~~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 78 PGMDDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLH-QHKVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred CCCCcEEEEEEEcCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHH-HCCCccCCCCHHHEEECCCCCEEEcc
Confidence 246899999998 788888432 2346889999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCcccc-----CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-----SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------- 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-----~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------- 272 (852)
||++....... .......|+..|+|||++. ...++.++|+|||||++|+|++|..||......
T Consensus 155 fg~~~~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~ 230 (272)
T cd06637 155 FGVSAQLDRTV----GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR 230 (272)
T ss_pred CCCceeccccc----ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc
Confidence 99987443211 1223456788999999973 345778999999999999999999998432111
Q ss_pred -----cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 -----SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 -----~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.....++..+.+++.+||..+|.+||++.+++.| +||
T Consensus 231 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~-----~~~ 272 (272)
T cd06637 231 NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH-----PFI 272 (272)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC-----CCC
Confidence 1124678899999999999999999999999997 786
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=294.44 Aligned_cols=234 Identities=18% Similarity=0.225 Sum_probs=190.8
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PI 144 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L 144 (852)
.|+++.||.+..+.+|+.|++|++.. ......+..|+.+++.++||||+++++.++++ ..+|+||||+. +|
T Consensus 3 ~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~--~~~~lv~e~~~g~~L 80 (277)
T cd05607 3 KGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESK--THLCLVMSLMNGGDL 80 (277)
T ss_pred CCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecC--CeEEEEEecCCCCCH
Confidence 89999999999999999999999875 12234556799999999999999999999987 89999999997 68
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccc
Q psy3914 145 FYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYS 224 (852)
Q Consensus 145 ~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~ 224 (852)
..++... ....++...+..++.||+.||.||| +.+++||||||+||+++.++.++|+|||++....... ...
T Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH-~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-----~~~ 152 (277)
T cd05607 81 KYHIYNV--GERGLEMERVIHYSAQITCGILHLH-SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-----TIT 152 (277)
T ss_pred HHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHH-HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-----eee
Confidence 7777322 2245788889999999999999999 8999999999999999999999999999987543211 112
Q ss_pred cccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------------cCcCCCChhHHHHHHH
Q psy3914 225 RYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----------------SNIDNIPENLKRVYLE 288 (852)
Q Consensus 225 ~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----------------~~~~~ip~~L~~li~~ 288 (852)
...++..|+|||++.+..++.++|+|||||++|+|++|..||.+.... .....+++.+.+++.+
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 232 (277)
T cd05607 153 QRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRL 232 (277)
T ss_pred ccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHH
Confidence 345788999999997777899999999999999999999998542110 0124678999999999
Q ss_pred hccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 289 LISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 289 lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
||+.||.+||++.+++++... ++||+.
T Consensus 233 ~L~~~P~~R~~~~~~~~~~~~-h~~f~~ 259 (277)
T cd05607 233 FLAKKPEDRLGSREKNDDPRK-HEFFKT 259 (277)
T ss_pred HhccCHhhCCCCccchhhhhc-ChhhcC
Confidence 999999999999555443221 378765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-32 Score=293.11 Aligned_cols=238 Identities=17% Similarity=0.237 Sum_probs=195.2
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
..|.+.+.|| .|+++.||.|.++.+|..|+||++.. ......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~y~~~~~ig--------~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~- 75 (291)
T cd07870 5 TSYLNLEKLG--------EGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTK- 75 (291)
T ss_pred ceeEEEEEEE--------ecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecC-
Confidence 4599999999 99999999999999999999999876 22234678899999999999999999999987
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
...|+|+||+. +|..++.. ....+.+..+..++.||+.||.||| +.+++|+||||+||+++.+|.+||+|||++
T Consensus 76 -~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH-~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 150 (291)
T cd07870 76 -ETLTFVFEYMHTDLAQYMIQ---HPGGLHPYNVRLFMFQLLRGLAYIH-GQHILHRDLKPQNLLISYLGELKLADFGLA 150 (291)
T ss_pred -CeEEEEEecccCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCChHHEEEcCCCcEEEeccccc
Confidence 89999999998 66666532 2345788889999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------- 272 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------- 272 (852)
+..... ........++..|+|||++.+ ..++.++|+|||||++|+|++|..||.+....
T Consensus 151 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
T cd07870 151 RAKSIP----SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTE 226 (291)
T ss_pred cccCCC----CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCCh
Confidence 743221 111223446779999999843 45778899999999999999999998542210
Q ss_pred ------cC----------------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 ------SN----------------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 ------~~----------------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.. .-..+..+.+++.+|+..||.+|||+.+++.| +||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h-----~~~ 291 (291)
T cd07870 227 DTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH-----PYF 291 (291)
T ss_pred hhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC-----CCC
Confidence 00 00125678899999999999999999999997 887
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=293.56 Aligned_cols=244 Identities=14% Similarity=0.209 Sum_probs=198.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC---chHHHHHHHHH-HHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD---TYEPALSYVKK-LKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~---~~~~~~~E~~~-Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|+++.||+|.++.+|+.|+||+++... ....+..|+.. ++.+.||||+++++.+..+
T Consensus 2 ~~~~~~~ig--------~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~- 72 (283)
T cd06617 2 DLEVIEELG--------RGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFRE- 72 (283)
T ss_pred CceEEEEec--------ccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecC-
Confidence 589999999 9999999999999999999999988621 22334445554 6777899999999999987
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+.+|+||||+. +|.+++.........+++..+..++.||+.||.|||+.++++||||+|+||+++.++.+||+|||++
T Consensus 73 -~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~ 151 (283)
T cd06617 73 -GDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGIS 151 (283)
T ss_pred -CcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 88999999998 7888886544445678999999999999999999994359999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccC----CCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-c------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLS----HVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-L------------ 272 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~----~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-l------------ 272 (852)
..+.... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||..... .
T Consensus 152 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 226 (283)
T cd06617 152 GYLVDSV-----AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSP 226 (283)
T ss_pred ccccccc-----ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCC
Confidence 7543211 1112346778999998733 4567889999999999999999999853211 0
Q ss_pred c-CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchH
Q psy3914 273 S-NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 273 ~-~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~l 318 (852)
. ....+|..+.+++.+||..+|..||++.++++| +||.+..
T Consensus 227 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~-----~~~~~~~ 268 (283)
T cd06617 227 QLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH-----PFFELHL 268 (283)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC-----chhhhcc
Confidence 0 123578899999999999999999999999997 8987643
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=293.75 Aligned_cols=238 Identities=18% Similarity=0.273 Sum_probs=202.8
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
+|++.+.|| .|+++.||+|.+..+++.|+||++... .....+.+|+++++.++||||+++++.+.++
T Consensus 2 ~y~~~~~lg--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 71 (274)
T cd06609 2 LFTLLECIG--------KGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG-- 71 (274)
T ss_pred hhhhhhhhc--------CCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC--
Confidence 588899999 899999999999999999999999762 2345678999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+|+|+||+. +|.+++.. ..+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.++|+|||++
T Consensus 72 ~~~~~v~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lh-~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 72 SKLWIIMEYCGGGSCLDLLKP-----GKLDETYIAFILREVLLGLEYLH-EEGKIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred CeEEEEEEeeCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCHHHEEECCCCCEEEcccccc
Confidence 89999999998 68888742 37899999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc------------CcCC
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------NIDN 277 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------~~~~ 277 (852)
....... .......++..|+|||++.+..++.++|+|||||++|+|++|..||....... ....
T Consensus 146 ~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 221 (274)
T cd06609 146 GQLTSTM----SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGN 221 (274)
T ss_pred eeecccc----cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCccc
Confidence 7553321 11223456778999999977778999999999999999999999985432111 1122
Q ss_pred -CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 278 -IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 278 -ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
+|..+.+++.+||..+|.+||++.++++| +||.+.
T Consensus 222 ~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~-----~~~~~~ 257 (274)
T cd06609 222 KFSKPFKDFVSLCLNKDPKERPSAKELLKH-----KFIKKA 257 (274)
T ss_pred ccCHHHHHHHHHHhhCChhhCcCHHHHhhC-----hhhcCC
Confidence 78899999999999999999999999997 888653
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=288.31 Aligned_cols=235 Identities=16% Similarity=0.234 Sum_probs=199.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
+|++.+.+| .|+++.||.+.++.++..|++|.++. ....+.+.+|+.+++.++||||+++++.+++.
T Consensus 1 ~y~~~~~lg--------~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 70 (255)
T cd08219 1 QYNVLRVVG--------EGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEAD-- 70 (255)
T ss_pred CceEEEEee--------ccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEEC--
Confidence 489999999 89999999999999999999999875 23456788899999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+.+|+||||+. +|.+++... ....+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+|||.+
T Consensus 71 ~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH-~~~i~H~dl~p~nili~~~~~~~l~dfg~~ 147 (255)
T cd08219 71 GHLYIVMEYCDGGDLMQKIKLQ--RGKLFPEDTILQWFVQMCLGVQHIH-EKRVLHRDIKSKNIFLTQNGKVKLGDFGSA 147 (255)
T ss_pred CEEEEEEeeCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHh-hCCcccCCCCcceEEECCCCcEEEcccCcc
Confidence 89999999997 688777421 2345789999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------cCcCC
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------SNIDN 277 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------~~~~~ 277 (852)
...... ........+++.|+|||++.+..++.++|+|||||++|+|++|..||...... .....
T Consensus 148 ~~~~~~----~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 223 (255)
T cd08219 148 RLLTSP----GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSH 223 (255)
T ss_pred eeeccc----ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcc
Confidence 744321 11112345777899999997777889999999999999999999999643211 12345
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
++..+.+++.+||+.+|.+||++.+++..
T Consensus 224 ~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 224 YSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred cCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 77889999999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=293.22 Aligned_cols=233 Identities=13% Similarity=0.202 Sum_probs=196.6
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.|++.+.|| .|+++.||.|.+..++..|+||++... .....+.+|++++++++||||+++++.++..
T Consensus 2 ~~~~~~~lg--------~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 71 (279)
T cd06619 2 DIQYQEILG--------HGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVE-- 71 (279)
T ss_pred cchheeeec--------cCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC--
Confidence 478889999 899999999999999999999998763 2234678999999999999999999999988
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+..|+||||+. +|..+ ..+++..+..++.||+.||.||| +.+++|+||+|+||+++.+|.+||+|||++
T Consensus 72 ~~~~lv~e~~~~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~Nill~~~~~~~l~dfg~~ 142 (279)
T cd06619 72 NRISICTEFMDGGSLDVY--------RKIPEHVLGRIAVAVVKGLTYLW-SLKILHRDVKPSNMLVNTRGQVKLCDFGVS 142 (279)
T ss_pred CEEEEEEecCCCCChHHh--------hcCCHHHHHHHHHHHHHHHHHHH-HCCEeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence 89999999998 45332 34678889999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----------------- 272 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----------------- 272 (852)
...... ......++..|+|||++.+..++.++|+|||||++|+|++|..||......
T Consensus 143 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 216 (279)
T cd06619 143 TQLVNS------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED 216 (279)
T ss_pred eecccc------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC
Confidence 754321 112346788999999997778889999999999999999999998431110
Q ss_pred -c--CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 -S--NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 -~--~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
. ....+++.+.+++.+||..+|..||++.+++.| +||.+.
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~-----~~~~~~ 259 (279)
T cd06619 217 PPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH-----PFIVQY 259 (279)
T ss_pred CCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC-----cccccc
Confidence 0 013467889999999999999999999999997 888643
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-32 Score=290.26 Aligned_cols=242 Identities=13% Similarity=0.175 Sum_probs=198.2
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-------CchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-------DTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-------~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
..|++++.+| .|+++.||.|.+..++..|++|++... .....+.+|+.+++.++||||+++++.+
T Consensus 2 ~~~~~~~~lg--------~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 73 (266)
T cd06651 2 INWRRGKLLG--------QGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCL 73 (266)
T ss_pred CCccccceec--------CCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEE
Confidence 3589999999 999999999999999999999988651 1235688899999999999999999998
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
.+.....+|+++||+. +|.+++.+ ...+++..+..++.||+.||.||| +++++||||+|+||+++.++.+||+
T Consensus 74 ~~~~~~~~~l~~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~LH-~~~i~H~~l~p~nil~~~~~~~~l~ 148 (266)
T cd06651 74 RDRAEKTLTIFMEYMPGGSVKDQLKA----YGALTESVTRKYTRQILEGMSYLH-SNMIVHRDIKGANILRDSAGNVKLG 148 (266)
T ss_pred EcCCCCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeeeCCCCHHHEEECCCCCEEEc
Confidence 7644478999999997 68888742 245788999999999999999999 9999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------ 272 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------ 272 (852)
|||++........ .........++..|+|||.+.+..++.++|+|||||++|+|++|..||......
T Consensus 149 dfg~~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~ 227 (266)
T cd06651 149 DFGASKRLQTICM-SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTN 227 (266)
T ss_pred cCCCccccccccc-cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCC
Confidence 9999864422111 111112345677999999997777888999999999999999999999543211
Q ss_pred -cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 273 -SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 273 -~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
.....+++.+..++ +||..+|.+||++.++++| +||+
T Consensus 228 ~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h-----p~~~ 265 (266)
T cd06651 228 PQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH-----PFAQ 265 (266)
T ss_pred CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC-----cccc
Confidence 11234567788888 5777899999999999998 8885
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=295.97 Aligned_cols=224 Identities=16% Similarity=0.148 Sum_probs=187.1
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCC--Cc---hHHHHHHHHHHHhCCCCCcceEeeeEEc--CCCCeEEEEEeecc--
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSA--DT---YEPALSYVKKLKTLRHPSILTFLDSVES--PSKSLVYLAVEYVE-- 142 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~--~~---~~~~~~E~~~Lk~LrHPnIlk~~d~~e~--~~~~~~yIVtE~v~-- 142 (852)
.|+++.||+|.. +|+.|+||++... .. .+.+.+|+.+|++++||||+++++++.+ +....+|+||||+.
T Consensus 30 ~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g 107 (283)
T PHA02988 30 ENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRG 107 (283)
T ss_pred eCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCC
Confidence 899999999988 7899999999762 11 4667899999999999999999999876 32357999999999
Q ss_pred cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcc
Q psy3914 143 PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKR 222 (852)
Q Consensus 143 ~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~ 222 (852)
+|.+++.+ ...++......++.|++.||.|||...+++||||||+||+++.+|.+||+|||++.......
T Consensus 108 ~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~------ 177 (283)
T PHA02988 108 YLREVLDK----EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP------ 177 (283)
T ss_pred cHHHHHhh----CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc------
Confidence 69988843 35678888999999999999999944699999999999999999999999999987442211
Q ss_pred cccccCCCcccCCccccC--CCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-------------ccCcCCCChhHHHHHH
Q psy3914 223 YSRYEDQSTYQIPENSLS--HVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-------------LSNIDNIPENLKRVYL 287 (852)
Q Consensus 223 ~~~~~gt~~Y~APE~~~~--~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-------------l~~~~~ip~~L~~li~ 287 (852)
....++..|+|||++.+ ..++.++|||||||++|||++|..||.+... ......+|+.+.+++.
T Consensus 178 -~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~ 256 (283)
T PHA02988 178 -FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVE 256 (283)
T ss_pred -ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHH
Confidence 12346779999999854 6789999999999999999999999964321 1112367899999999
Q ss_pred HhccCCCCCCCCHHHHHHhhc
Q psy3914 288 ELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 288 ~lL~~nP~~Rps~~elL~~l~ 308 (852)
+||+.||..|||+.++++.+.
T Consensus 257 ~cl~~dp~~Rps~~ell~~l~ 277 (283)
T PHA02988 257 ACTSHDSIKRPNIKEILYNLS 277 (283)
T ss_pred HHhcCCcccCcCHHHHHHHHH
Confidence 999999999999999998754
|
|
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=308.91 Aligned_cols=230 Identities=17% Similarity=0.241 Sum_probs=188.2
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhC---CCCCcceEeeeEEcCCCCeEEEEEeecc-
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTL---RHPSILTFLDSVESPSKSLVYLAVEYVE- 142 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~L---rHPnIlk~~d~~e~~~~~~~yIVtE~v~- 142 (852)
.|++++||+|+++.+|+.|+||++.+ ........+|..++..+ +||||+++++.+++. ..+|+||||+.
T Consensus 3 ~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~--~~~~lv~e~~~~ 80 (330)
T cd05586 3 KGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTD--SDLYLVTDYMSG 80 (330)
T ss_pred CCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecC--CeEEEEEcCCCC
Confidence 89999999999999999999999976 11223344555666555 699999999999987 89999999998
Q ss_pred -cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCc
Q psy3914 143 -PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMK 221 (852)
Q Consensus 143 -~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~ 221 (852)
+|..++. ..+.+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++...... ..
T Consensus 81 g~L~~~l~----~~~~~~~~~~~~~~~qil~al~~LH-~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~----~~ 151 (330)
T cd05586 81 GELFWHLQ----KEGRFSEDRAKFYIAELVLALEHLH-KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD----NK 151 (330)
T ss_pred ChHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC----CC
Confidence 6877773 3467899999999999999999999 899999999999999999999999999998632111 11
Q ss_pred ccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-----------Cc-CCCChhHHHHHHH
Q psy3914 222 RYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS-----------NI-DNIPENLKRVYLE 288 (852)
Q Consensus 222 ~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~-----------~~-~~ip~~L~~li~~ 288 (852)
......||..|+|||++. ...++.++|||||||++|+|++|..||.+..... .. ..+++.+.+++++
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~ 231 (330)
T cd05586 152 TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKG 231 (330)
T ss_pred CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHH
Confidence 122456889999999984 4457889999999999999999999996542211 11 2468899999999
Q ss_pred hccCCCCCCC----CHHHHHHhhcCCCCCCcch
Q psy3914 289 LISERPNQRP----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 289 lL~~nP~~Rp----s~~elL~~l~~~~~fF~n~ 317 (852)
||+.||.+|| ++.++++| +||.+.
T Consensus 232 ~L~~~P~~R~~~~~~~~~ll~h-----~~~~~~ 259 (330)
T cd05586 232 LLNRNPQHRLGAHRDAVELKEH-----PFFADI 259 (330)
T ss_pred HcCCCHHHCCCCCCCHHHHhcC-----ccccCC
Confidence 9999999998 68888887 899764
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-32 Score=291.16 Aligned_cols=247 Identities=17% Similarity=0.209 Sum_probs=201.0
Q ss_pred cCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhC-CCCCcceEee
Q psy3914 47 GRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTL-RHPSILTFLD 124 (852)
Q Consensus 47 ~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~L-rHPnIlk~~d 124 (852)
...+....+|++.+.|| .|+++.||+|.++.+++.|+||++.. ......+.+|+.+++.+ +||||+++++
T Consensus 11 ~~~~~~~~~~~~~~~lg--------~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~ 82 (286)
T cd06638 11 DSFPDPSDTWEIIETIG--------KGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYG 82 (286)
T ss_pred ecCCCcccceeeeeeec--------cCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeee
Confidence 33344556799999999 99999999999999999999999876 33346688999999999 6999999999
Q ss_pred eEEcC---CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC
Q psy3914 125 SVESP---SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG 199 (852)
Q Consensus 125 ~~e~~---~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g 199 (852)
.+... ....+|+||||+. +|.+++.........+++..+..++.||+.||.||| +.+++||||+|+||+++.+|
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 83 MYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH-VNKTIHRDVKGNNILLTTEG 161 (286)
T ss_pred eeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH-hCCccccCCCHHhEEECCCC
Confidence 87421 2267999999997 798888544444567889999999999999999999 89999999999999999999
Q ss_pred cEEEcccchhhccccccCCCCcccccccCCCcccCCcccc-----CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-
Q psy3914 200 EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-----SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS- 273 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-----~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~- 273 (852)
.+||+|||++....... .......|+..|+|||++. ...++.++|+|||||++|+|++|..||.......
T Consensus 162 ~~kl~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~ 237 (286)
T cd06638 162 GVKLVDFGVSAQLTSTR----LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA 237 (286)
T ss_pred CEEEccCCceeecccCC----CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH
Confidence 99999999987543211 1112345788999999973 3457789999999999999999999985432211
Q ss_pred -------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 274 -------------NIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 274 -------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
....++..+..++.+||+.+|.+||++.++++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 238 LFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred HhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 123356789999999999999999999999997
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=295.30 Aligned_cols=238 Identities=13% Similarity=0.177 Sum_probs=201.0
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
|++.+.|| .|++|.||.|.++.+++.|+||.+... .....+.+|+.+++.++||+|+.+++.+.+.
T Consensus 2 f~~~~~ig--------~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~- 72 (285)
T cd05630 2 FRQYRVLG--------KGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETK- 72 (285)
T ss_pred ceeeEEee--------cCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC-
Confidence 77888999 899999999999999999999998761 1234567899999999999999999999987
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+|+||||+. +|.+++... ....+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||+
T Consensus 73 -~~~~lv~e~~~g~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~lH-~~~iiH~dikp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05630 73 -DALCLVLTLMNGGDLKFHIYHM--GEAGFEEGRAVFYAAEICCGLEDLH-QERIVYRDLKPENILLDDHGHIRISDLGL 148 (285)
T ss_pred -CEEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHH-hCCEEeCCCCHHHEEECCCCCEEEeeccc
Confidence 89999999997 688887432 2246889999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------------c
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------S 273 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------~ 273 (852)
+...... .......|+..|+|||++.+..++.++|+|||||++|+|++|..||.+.... .
T Consensus 149 ~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 223 (285)
T cd05630 149 AVHVPEG-----QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEE 223 (285)
T ss_pred eeecCCC-----ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhh
Confidence 7643211 1112346788999999997778899999999999999999999999643210 1
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCC-----HHHHHHhhcCCCCCCcc
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPN-----PADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps-----~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++++||+.+|.+||+ +.++++| +||+.
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h-----~~~~~ 266 (285)
T cd05630 224 YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH-----PLFKQ 266 (285)
T ss_pred cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC-----hhhhc
Confidence 23467889999999999999999999 8999997 88854
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-32 Score=287.43 Aligned_cols=238 Identities=18% Similarity=0.249 Sum_probs=201.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.+| .|+++.+|.++.+.+|+.|+||.+.. ......+.+|+.++++++||||+++++.++..
T Consensus 1 ~y~~~~~lg--------~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~- 71 (256)
T cd08218 1 KYVKVKKIG--------EGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEEN- 71 (256)
T ss_pred CceEEEEec--------cCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCC-
Confidence 489999999 99999999999999999999999875 22345788999999999999999999999987
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
+..|+|+||+. +|.+++... ....+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+|||+
T Consensus 72 -~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh-~~~i~h~~l~~~nil~~~~~~~~l~d~~~ 147 (256)
T cd08218 72 -GNLYIVMDYCEGGDLYKKINAQ--RGVLFPEDQILDWFVQICLALKHVH-DRKILHRDIKSQNIFLTKDGTIKLGDFGI 147 (256)
T ss_pred -CeEEEEEecCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHH-hCCEecCCCCHHHEEEcCCCCEEEeeccc
Confidence 89999999997 688887432 2235788999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc------------ccCcC
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS------------LSNID 276 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------------l~~~~ 276 (852)
+....... .......+++.|+|||+..+..++.++|+|||||++|+|++|..||..... .....
T Consensus 148 ~~~~~~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (256)
T cd08218 148 ARVLNSTV----ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSS 223 (256)
T ss_pred eeecCcch----hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcc
Confidence 87543211 111223467789999999777788899999999999999999999853321 11235
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.++..+.+++.+||+.+|..||++.++++| +||
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~-----~~~ 256 (256)
T cd08218 224 HYSYDLRNLVSQLFKRNPRDRPSVNSILEK-----NFI 256 (256)
T ss_pred cCCHHHHHHHHHHhhCChhhCcCHHHHhhC-----cCC
Confidence 678899999999999999999999999997 776
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=292.99 Aligned_cols=237 Identities=19% Similarity=0.273 Sum_probs=196.8
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
|++.+.|| .|+++.||+|+++.+|..|+||++... .....+.+|+.+++.++||||+++++++.+.
T Consensus 1 y~~~~~l~--------~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~-- 70 (283)
T cd07835 1 YQKVEKIG--------EGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE-- 70 (283)
T ss_pred CchheEec--------CCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC--
Confidence 67788898 899999999999999999999998762 2335678899999999999999999999987
Q ss_pred CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
...|++|||+. +|.+++.... ...+++..+..++.||+.||.||| +.+++||||+|+||+++.++.++|+|||++.
T Consensus 71 ~~~~iv~e~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~lH-~~~~~H~dl~p~nil~~~~~~~~l~df~~~~ 147 (283)
T cd07835 71 NKLYLVFEFLDLDLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCH-SHRVLHRDLKPQNLLIDREGALKLADFGLAR 147 (283)
T ss_pred CeEEEEEeccCcCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHH-HCCeeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence 89999999998 7888874321 136899999999999999999999 8999999999999999999999999999986
Q ss_pred ccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----------------
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----------------- 272 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----------------- 272 (852)
..... ........++..|+|||++. ...++.++|+|||||++|+|++|..||.+....
T Consensus 148 ~~~~~----~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 223 (283)
T cd07835 148 AFGVP----VRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDV 223 (283)
T ss_pred ccCCC----ccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHH
Confidence 43221 11112234567899999874 345688999999999999999999988533210
Q ss_pred -----------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 -----------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 -----------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.....++..+.+++.+||+.+|.+||++.+++.| +||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~-----~~~ 283 (283)
T cd07835 224 WPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH-----PYF 283 (283)
T ss_pred hhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC-----CCC
Confidence 0124567889999999999999999999999997 776
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=294.25 Aligned_cols=238 Identities=18% Similarity=0.287 Sum_probs=198.5
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|+++.||+|.++.+++.|+||+++. ......+.+|+++++.++||||+++++++...
T Consensus 2 ~y~~~~~i~--------~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~- 72 (288)
T cd07833 2 KYEVLGVVG--------EGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRK- 72 (288)
T ss_pred ceeEEEEec--------ccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEEC-
Confidence 599999999 89999999999999999999999876 23456789999999999999999999999987
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+.+|+||||+. .+...+. .....+++..+.+++.||+.||.||| +.+++|+||+|+||+++.+|.+||+|||++
T Consensus 73 -~~~~iv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~~~i~~~l~~LH-~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~ 147 (288)
T cd07833 73 -GRLYLVFEYVERTLLELLE---ASPGGLPPDAVRSYIWQLLQAIAYCH-SHNIIHRDIKPENILVSESGVLKLCDFGFA 147 (288)
T ss_pred -CEEEEEEecCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHeEECCCCCEEEEeeecc
Confidence 89999999999 4443332 22356899999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCC-CCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSH-VTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------- 272 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------- 272 (852)
......... ......++..|+|||++.+. .++.++|+|||||++|+|++|..||.+....
T Consensus 148 ~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (288)
T cd07833 148 RALRARPAS---PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPS 224 (288)
T ss_pred cccCCCccc---cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 754432211 11234567789999998666 7889999999999999999999888532110
Q ss_pred ---------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 ---------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 ---------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.....+|..+.+++++||+.+|.+||++.+++.| +||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~-----~~f 288 (288)
T cd07833 225 HQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH-----PYF 288 (288)
T ss_pred HhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC-----CCC
Confidence 0012348889999999999999999999999997 776
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=308.26 Aligned_cols=242 Identities=16% Similarity=0.218 Sum_probs=196.1
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEE-----cCCCeEEEEEEEeC---CCchHHHHHHHHHHHhC-CCCCcceEee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKK-----KGSNEKVTIFLNDS---ADTYEPALSYVKKLKTL-RHPSILTFLD 124 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~-----k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~L-rHPnIlk~~d 124 (852)
.+|++++.|| .|+||+||+|+. ..++..|+||++.. ....+.+.+|+++|+.+ +||||+++++
T Consensus 35 ~~~~~~~~LG--------~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~ 106 (375)
T cd05104 35 NRLSFGKTLG--------AGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLG 106 (375)
T ss_pred HHeehhheec--------CCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeee
Confidence 3599999999 999999999974 34567999999875 22345688999999999 8999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhh-------------------------------------------------
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLK------------------------------------------------- 153 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~------------------------------------------------- 153 (852)
++... ...|+||||+. +|.+++.....
T Consensus 107 ~~~~~--~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 184 (375)
T cd05104 107 ACTVG--GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKAD 184 (375)
T ss_pred eeccC--CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccc
Confidence 99987 88999999998 78888853210
Q ss_pred ----------------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 154 ----------------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 154 ----------------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
....++...+..+++||+.||.||| +.+++||||||+||+++.++.+||+|||++..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH-~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 263 (375)
T cd05104 185 KRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA-SKNCIHRDLAARNILLTHGRITKICDFGLARD 263 (375)
T ss_pred cccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCchhhEEEECCCcEEEecCcccee
Confidence 0124678889999999999999999 89999999999999999999999999999875
Q ss_pred cccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-------------ccCcCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS-------------LSNIDN 277 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~-------------l~~~~~ 277 (852)
....... .......++..|+|||++.+..++.++|||||||++|||++ |..||.+... ......
T Consensus 264 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (375)
T cd05104 264 IRNDSNY--VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPEC 341 (375)
T ss_pred ccCcccc--cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCC
Confidence 4322111 11112334567999999988889999999999999999998 8888854321 112345
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
+|..+.+++.+||+.||++||++.++++.++
T Consensus 342 ~~~~l~~li~~cl~~dP~~RPs~~eil~~l~ 372 (375)
T cd05104 342 APSEMYDIMKSCWDADPLKRPTFKQIVQLIE 372 (375)
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 6889999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=291.45 Aligned_cols=235 Identities=17% Similarity=0.263 Sum_probs=203.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.|| .|+++.||.|.+..+++.|++|++... .....+.+|++++++++||||+++++.+++.
T Consensus 1 ~y~~~~~i~--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 72 (258)
T cd05578 1 HFELLRVIG--------KGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDE 72 (258)
T ss_pred CceEEEEec--------cCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCC
Confidence 489999999 899999999999999999999999861 3456889999999999999999999999887
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
..+|+|+||+. +|..++.. ...+++..+..++.||++||.||| +.+++|+||+|+||+++.++.++|+|||
T Consensus 73 --~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lh-~~~i~h~dl~~~nil~~~~~~~~l~d~~ 145 (258)
T cd05578 73 --ENMYLVVDLLLGGDLRYHLSQ----KVKFSEEQVKFWICEIVLALEYLH-SKGIIHRDIKPDNILLDEQGHVHITDFN 145 (258)
T ss_pred --CeEEEEEeCCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHH-hCCeeccCCCHHHeEEcCCCCEEEeecc
Confidence 89999999998 78888843 257899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------cc
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------LS 273 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------l~ 273 (852)
++....... ......++..|+|||++....++.++|+|||||++|+|++|..||..... ..
T Consensus 146 ~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 220 (258)
T cd05578 146 IATKVTPDT-----LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVL 220 (258)
T ss_pred cccccCCCc-----cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcccccc
Confidence 987543211 11234567789999999777788999999999999999999999865432 12
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCCH--HHHHHhhcCCCCCC
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPNP--ADFIMRNRKPGGYF 314 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps~--~elL~~l~~~~~fF 314 (852)
.+..+|..+.+++.+||..+|.+||+. .++++| +||
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~-----~~~ 258 (258)
T cd05578 221 YPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNH-----PYF 258 (258)
T ss_pred CcccCcHHHHHHHHHHccCChhHcCCccHHHHhcC-----CCC
Confidence 345678999999999999999999999 999887 776
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=294.96 Aligned_cols=244 Identities=18% Similarity=0.188 Sum_probs=194.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|+++.||+|.++.+++.|+||++.. ......+.+|++++++++||||+++++++...
T Consensus 12 ~~y~~~~~lg--------~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 83 (310)
T cd07865 12 SKYEKLAKIG--------QGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK 83 (310)
T ss_pred hheEEEEEee--------cCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecc
Confidence 3599999999 89999999999999999999998865 22334567899999999999999999988754
Q ss_pred C------CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 130 S------KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 130 ~------~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
. ....|+||||+. +|.+++.. ....+++.++..++.||+.||.||| +.+++|+||+|+||+++.+|.+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH-~~~i~H~dl~p~nil~~~~~~~k 159 (310)
T cd07865 84 ATPYNRYKGSFYLVFEFCEHDLAGLLSN---KNVKFTLSEIKKVMKMLLNGLYYIH-RNKILHRDMKAANILITKDGILK 159 (310)
T ss_pred cccccCCCceEEEEEcCCCcCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCCHHHEEECCCCcEE
Confidence 1 235799999998 67777632 2246899999999999999999999 89999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc--------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS-------- 273 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~-------- 273 (852)
|+|||++..+...............++..|+|||++.+ ..++.++|+|||||++|+|++|..||.+.....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~ 239 (310)
T cd07865 160 LADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQL 239 (310)
T ss_pred ECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 99999987543322111111223456778999998743 446789999999999999999998885432110
Q ss_pred ----------------------Cc-------------CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 274 ----------------------NI-------------DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 274 ----------------------~~-------------~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.. ...+..+.+++.+||..||.+||++.++++| +||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h-----~~f 310 (310)
T cd07865 240 CGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH-----DFF 310 (310)
T ss_pred hCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC-----CCC
Confidence 00 0123567789999999999999999999997 887
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=294.67 Aligned_cols=240 Identities=15% Similarity=0.209 Sum_probs=198.5
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.|++.+.|| .|+++.||.|.+..++..|++|.+... .....+.+|+.++++++||||+++++.+...
T Consensus 2 ~~~~~~~ig--------~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-- 71 (286)
T cd06622 2 EIEVLDELG--------KGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIE-- 71 (286)
T ss_pred hhhhhhhhc--------ccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC--
Confidence 488999999 999999999999999999999988752 2245688999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+.+|+||||+. +|..++.. ......+++..+..++.||+.||.|||+.++++|+||+|+||+++.++.+||+|||++
T Consensus 72 ~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 150 (286)
T cd06622 72 GAVYMCMEYMDAGSLDKLYAG-GVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVS 150 (286)
T ss_pred CeEEEEEeecCCCCHHHHHHh-ccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCc
Confidence 89999999998 68877743 2223478999999999999999999995579999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCC------CCCcchhHHhHHHHHHHHHhCCCCCCCCcc------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSH------VTKCSTDMYGLGILIWEVFNGPLQSTNRKS------------ 271 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~------~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------------ 271 (852)
...... ......++..|+|||++.+. .++.++|+|||||++|+|++|..||.....
T Consensus 151 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 224 (286)
T cd06622 151 GNLVAS------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVD 224 (286)
T ss_pred ccccCC------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhh
Confidence 754221 11123466789999997332 347789999999999999999999853211
Q ss_pred ---ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 272 ---LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 272 ---l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
......++..+.+++.+||..+|.+||++.+++.| +||..
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~-----~~~~~ 267 (286)
T cd06622 225 GDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH-----PWLVK 267 (286)
T ss_pred cCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC-----hhhhh
Confidence 11234567889999999999999999999999997 77743
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-32 Score=291.20 Aligned_cols=244 Identities=16% Similarity=0.211 Sum_probs=203.8
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
+|++.+.|| .|+++.||.|.++.+++.|++|.+... .....+.+|++++++++||||+++++++.+...
T Consensus 2 ~~~~~~~lg--------~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 73 (287)
T cd06621 2 KIVELSRLG--------EGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESS 73 (287)
T ss_pred ceEEEEEec--------cCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCC
Confidence 488899999 899999999999999999999999862 234568899999999999999999998866534
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+|+||||+. +|.+++.........+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+|||++
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH-~~~i~H~dl~~~nil~~~~~~~~l~dfg~~ 152 (287)
T cd06621 74 SSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH-SRKIIHRDIKPSNILLTRKGQVKLCDFGVS 152 (287)
T ss_pred CeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEEecCCeEEEeecccc
Confidence 68999999998 798888654445567899999999999999999999 899999999999999999999999999997
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----c-----------c
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----L-----------S 273 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----l-----------~ 273 (852)
....... .....++..|+|||.+.+..++.++|+|+|||++|+|++|..||..... . .
T Consensus 153 ~~~~~~~------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 226 (287)
T cd06621 153 GELVNSL------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNP 226 (287)
T ss_pred ccccccc------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCch
Confidence 6432211 1123456789999999877888999999999999999999999854411 0 0
Q ss_pred Cc-------CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchH
Q psy3914 274 NI-------DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 274 ~~-------~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~l 318 (852)
.+ ...++.+.+++.+||..+|.+|||+.++++| +||.+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~-----~~~~~~~ 273 (287)
T cd06621 227 ELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH-----PWIKAQM 273 (287)
T ss_pred hhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC-----ccccccc
Confidence 00 1235678999999999999999999999997 8986653
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-32 Score=293.15 Aligned_cols=239 Identities=17% Similarity=0.205 Sum_probs=201.2
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
|++.+.|| .|+||+||.|....+++.|+||++... .....+.+|+++|+.++||||+.+++.+..+
T Consensus 2 ~~~~~~lg--------~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~- 72 (285)
T cd05632 2 FRQYRVLG--------KGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETK- 72 (285)
T ss_pred ceEEEEEe--------cCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC-
Confidence 77888899 899999999999999999999998762 2234577899999999999999999999987
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
+.+|+||||+. +|..++... ....+++..+..++.|++.||.||| +.+++||||+|+||+++.++.+||+|||+
T Consensus 73 -~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH-~~~iiH~dikp~Nili~~~~~~kl~Dfg~ 148 (285)
T cd05632 73 -DALCLVLTIMNGGDLKFHIYNM--GNPGFEEERALFYAAEILCGLEDLH-RENTVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred -CEEEEEEEeccCccHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeecCCCHHHEEECCCCCEEEecCCc
Confidence 89999999998 687776322 2346899999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------------c
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------S 273 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------~ 273 (852)
+...... .......|+..|+|||++.+..++.++|+|||||++|+|++|..||.+.... .
T Consensus 149 ~~~~~~~-----~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 223 (285)
T cd05632 149 AVKIPEG-----ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEV 223 (285)
T ss_pred ceecCCC-----CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccc
Confidence 8643211 1112346788999999997778899999999999999999999999643211 1
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCC-----HHHHHHhhcCCCCCCcch
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPN-----PADFIMRNRKPGGYFKND 317 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps-----~~elL~~l~~~~~fF~n~ 317 (852)
....++..+.+++.+||+.+|.+||+ +.+++.| +||.+.
T Consensus 224 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~-----~~~~~~ 267 (285)
T cd05632 224 YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH-----PFFRNM 267 (285)
T ss_pred cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC-----hhhhcC
Confidence 23567889999999999999999999 7788887 788664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-32 Score=289.35 Aligned_cols=239 Identities=16% Similarity=0.198 Sum_probs=200.3
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.|| .|+++.||+|..+.++..|+||.+.. ......+.+|+.+++.++||||+++++.+...
T Consensus 3 ~y~~~~~ig--------~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~ 74 (267)
T cd08229 3 NFRIEKKIG--------RGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED 74 (267)
T ss_pred hhhhhhhhc--------ccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC
Confidence 488899999 89999999999999999999998865 12335678899999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+..|++|||+. +|.+++.........+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+|||
T Consensus 75 --~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH-~~~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 75 --NELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH-SRRVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred --CeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHEEEcCCCCEEECcch
Confidence 89999999998 798888543344467899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------- 272 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------- 272 (852)
++........ ......++..|+|||++.+..++.++|+|||||++|+|++|..||.+...-
T Consensus 152 ~~~~~~~~~~----~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 227 (267)
T cd08229 152 LGRFFSSKTT----AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPP 227 (267)
T ss_pred hhhccccCCc----ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCC
Confidence 9875432111 112345777999999997777888999999999999999999998543210
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
.....++..+.+++.+||..+|.+|||+.++++.++
T Consensus 228 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~ 263 (267)
T cd08229 228 LPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAK 263 (267)
T ss_pred CCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHh
Confidence 012356788999999999999999999999888653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=301.24 Aligned_cols=242 Identities=14% Similarity=0.172 Sum_probs=200.8
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.|| .|++|.||.++.+.+++.|+||++.+ ......+.+|+.++..++||+|+++++.+++.
T Consensus 2 ~y~~~~~lG--------~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 73 (332)
T cd05623 2 DFEILKVIG--------RGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDE 73 (332)
T ss_pred CceEEEEEE--------eCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecC
Confidence 589999999 99999999999999999999999975 23344578899999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
..+|+||||+. +|.+++.+. ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||
T Consensus 74 --~~~~lv~ey~~~g~L~~~l~~~---~~~l~~~~~~~~~~qi~~al~~lH-~~~iiHrDlkp~Nili~~~~~~kL~DfG 147 (332)
T cd05623 74 --NNLYLVMDYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVIAIDSVH-QLHYVHRDIKPDNILMDMNGHIRLADFG 147 (332)
T ss_pred --CEEEEEEeccCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCCHHHEEECCCCCEEEeecc
Confidence 89999999997 799888432 356889999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCcccc-----CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSL-----SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------- 272 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-----~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------- 272 (852)
++..+..... .......||+.|+|||++. ...++.++|+|||||++|||++|..||.+....
T Consensus 148 ~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~ 224 (332)
T cd05623 148 SCLKLMEDGT---VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK 224 (332)
T ss_pred hheecccCCc---ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC
Confidence 9864422111 1112346889999999974 345788999999999999999999999654211
Q ss_pred ------cCcCCCChhHHHHHHHhccCCCCC--CCCHHHHHHhhcCCCCCCcchH
Q psy3914 273 ------SNIDNIPENLKRVYLELISERPNQ--RPNPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 273 ------~~~~~ip~~L~~li~~lL~~nP~~--Rps~~elL~~l~~~~~fF~n~l 318 (852)
.....+++.+.+++++||..++.+ |+++.++++| +||.+.-
T Consensus 225 ~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h-----~~f~~~~ 273 (332)
T cd05623 225 ERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH-----PFFTGID 273 (332)
T ss_pred ccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC-----CCcCCCC
Confidence 112457889999999999665544 6899999997 9998743
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=290.65 Aligned_cols=237 Identities=14% Similarity=0.204 Sum_probs=201.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.|++.+.|| .|+++.||+|.++.+++.|++|.+... .....+.+|+++++.++||||+++++.+..+
T Consensus 2 ~~~~~~~ig--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-- 71 (265)
T cd06605 2 DLEYLGELG--------AGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNN-- 71 (265)
T ss_pred cchHHHHhc--------CCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecC--
Confidence 478888999 899999999999999999999998872 2345678999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-CCceecccCCCCEEEccCCcEEEcccch
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLIND-ADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~-~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+|+++||+. +|.+++.... ..+++..+..++.||+.||.||| + .+++|+||+|+||+++.+|.++|+|||.
T Consensus 72 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH-~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~ 147 (265)
T cd06605 72 GDISICMEYMDGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLH-EKHKIIHRDVKPSNILVNSRGQIKLCDFGV 147 (265)
T ss_pred CEEEEEEEecCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHc-CCCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999999998 7998884321 57889999999999999999999 7 9999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc----cc------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK----SL------------ 272 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~----~l------------ 272 (852)
+........ ....++..|+|||.+.+..++.++|+|||||++|+|++|..||.... ..
T Consensus 148 ~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 221 (265)
T cd06605 148 SGQLVNSLA------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPP 221 (265)
T ss_pred chhhHHHHh------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCC
Confidence 875432111 11456778999999977788999999999999999999999985331 00
Q ss_pred -cCcC-CCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 -SNID-NIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 -~~~~-~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.... .++..+.++|.+||..+|.+||++.+++.| +||+.
T Consensus 222 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~-----~~~~~ 262 (265)
T cd06605 222 PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH-----PFIKK 262 (265)
T ss_pred CCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC-----chhhc
Confidence 0111 267889999999999999999999999997 88854
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=295.27 Aligned_cols=236 Identities=18% Similarity=0.288 Sum_probs=196.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|+++.||+|.++.+++.|++|++.. ......+.+|+++++.++||||+++++++..+
T Consensus 2 ~y~~~~~lg--------~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 72 (286)
T cd07846 2 KYENLGLVG--------EGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRK- 72 (286)
T ss_pred ceeEeeeec--------cCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccC-
Confidence 589999999 99999999999998999999998865 12345678999999999999999999999987
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
...|+||||+. .|..+. .....++...+..++.||+.||.||| +.+++|+||+|+||++++++.++|+|||+
T Consensus 73 -~~~~lv~e~~~~~~l~~~~----~~~~~~~~~~~~~~~~~i~~~l~~LH-~~~i~h~~l~p~ni~~~~~~~~~l~dfg~ 146 (286)
T cd07846 73 -KRLYLVFEFVDHTVLDDLE----KYPNGLDESRVRKYLFQILRGIEFCH-SHNIIHRDIKPENILVSQSGVVKLCDFGF 146 (286)
T ss_pred -CeEEEEEecCCccHHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCHHHEEECCCCcEEEEeeee
Confidence 89999999998 355443 22345899999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------- 272 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------- 272 (852)
+....... .......++..|+|||++. ...++.++|+|||||++|+|++|..||.+....
T Consensus 147 ~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (286)
T cd07846 147 ARTLAAPG----EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIP 222 (286)
T ss_pred eeeccCCc----cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCch
Confidence 87542211 1122345677899999984 345678899999999999999999888533211
Q ss_pred ---------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 ---------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 ---------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.....++..+.+++++||+.+|.+||++.+++.| +||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~-----~~~ 286 (286)
T cd07846 223 RHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH-----EFF 286 (286)
T ss_pred hhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC-----CCC
Confidence 0123678889999999999999999999999997 787
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-32 Score=289.35 Aligned_cols=239 Identities=16% Similarity=0.228 Sum_probs=198.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----C-------chHHHHHHHHHHHhCCCCCcce
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----D-------TYEPALSYVKKLKTLRHPSILT 121 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~-------~~~~~~~E~~~Lk~LrHPnIlk 121 (852)
|+|.+.+.+| .|+++.||.|.+..+|+.|+||.+... . ..+.+.+|+.+++.++||||++
T Consensus 1 ~~~~~~~~lg--------~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~ 72 (272)
T cd06629 1 FKWVKGELIG--------KGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQ 72 (272)
T ss_pred Cceeecceec--------ccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcce
Confidence 5799999999 999999999999999999999988641 1 1245788999999999999999
Q ss_pred EeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC
Q psy3914 122 FLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG 199 (852)
Q Consensus 122 ~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g 199 (852)
++++++.. ..+|+||||+. +|.+++.+. +.+++..+..++.||+.||.||| +.+++||||+|+||+++.++
T Consensus 73 ~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~~~nil~~~~~ 145 (272)
T cd06629 73 YLGFETTE--EYLSIFLEYVPGGSIGSCLRTY----GRFEEQLVRFFTEQVLEGLAYLH-SKGILHRDLKADNLLVDADG 145 (272)
T ss_pred EEEEeccC--CceEEEEecCCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHh-hCCeeecCCChhhEEEcCCC
Confidence 99999877 89999999997 788888432 57889999999999999999999 89999999999999999999
Q ss_pred cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCC--CCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----
Q psy3914 200 EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSH--VTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----- 272 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~--~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----- 272 (852)
.++|+|||++......... .......++..|+|||++... .++.++|+|||||++|++++|..||......
T Consensus 146 ~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~ 223 (272)
T cd06629 146 ICKISDFGISKKSDDIYDN--DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFK 223 (272)
T ss_pred eEEEeeccccccccccccc--cccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHH
Confidence 9999999998743321111 111234577799999998543 4788999999999999999999998532211
Q ss_pred ------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 ------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 ------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.....++..+.+++.+||..+|..||++.+++.| +||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~-----~~~ 272 (272)
T cd06629 224 LGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH-----PFI 272 (272)
T ss_pred hhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC-----CCC
Confidence 0123568899999999999999999999999997 775
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=291.36 Aligned_cols=241 Identities=15% Similarity=0.163 Sum_probs=197.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcC-----CCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-----SNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-----~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
..|.+.+.|| .|+++.||.|+... ++..|+||++.... ..+.+.+|+++|++++||||++++++
T Consensus 5 ~~~~~~~~lg--------~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~ 76 (280)
T cd05049 5 DTIVLKRELG--------EGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGV 76 (280)
T ss_pred HHhhHHhhcc--------ccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeE
Confidence 3488899999 89999999998753 36899999997722 34678999999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhh----------hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTL----------KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSI 193 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~----------~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NI 193 (852)
+... ...|+||||+. +|.+++.... .....+++..+..++.||+.||.||| +.+++||||+|+||
T Consensus 77 ~~~~--~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH-~~~i~h~dlkp~ni 153 (280)
T cd05049 77 CTEG--DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA-SQHFVHRDLATRNC 153 (280)
T ss_pred EecC--CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh-hCCeeccccccceE
Confidence 9987 89999999998 7999985321 12345788899999999999999999 89999999999999
Q ss_pred EEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCccc
Q psy3914 194 FINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKSL 272 (852)
Q Consensus 194 lV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~l 272 (852)
+++.++.+||+|||++........ ........++..|+|||++.+..++.++|||||||++|+|++ |..||.+....
T Consensus 154 li~~~~~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~ 231 (280)
T cd05049 154 LVGYDLVVKIGDFGMSRDVYTTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE 231 (280)
T ss_pred EEcCCCeEEECCcccceecccCcc--eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 999999999999999864322111 011112234568999999977888999999999999999998 99998543211
Q ss_pred ------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 273 ------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 273 ------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.....+|..+.+++.+||..||..||++.++++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l 278 (280)
T cd05049 232 EVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERL 278 (280)
T ss_pred HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHh
Confidence 12356789999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-32 Score=285.71 Aligned_cols=228 Identities=17% Similarity=0.252 Sum_probs=187.7
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cHHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFY 146 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~ 146 (852)
.|+++.||.|+++.+++.|++|.+... .....+.+|+++++.++||||+++++++... ..+|+||||+. +|.+
T Consensus 5 ~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~ 82 (252)
T cd05084 5 RGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK--QPIYIVMELVQGGDFLT 82 (252)
T ss_pred cccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC--CCeEEEEeeccCCcHHH
Confidence 899999999999999999999988652 2345788999999999999999999999987 88999999997 6888
Q ss_pred HHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccc
Q psy3914 147 HLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRY 226 (852)
Q Consensus 147 ~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~ 226 (852)
++.. ....+++..+..++.||+.||.||| +.+++||||+|+||+++.++.+||+|||++....+.... ......
T Consensus 83 ~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH-~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~ 156 (252)
T cd05084 83 FLRT---EGPRLKVKELIQMVENAAAGMEYLE-SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA--STGGMK 156 (252)
T ss_pred HHHh---CCCCCCHHHHHHHHHHHHHHHHHHH-hCCccccccchheEEEcCCCcEEECccccCccccccccc--ccCCCC
Confidence 8742 2246889999999999999999999 899999999999999999999999999998754321110 001111
Q ss_pred cCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCCCChhHHHHHHHhccCC
Q psy3914 227 EDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDNIPENLKRVYLELISER 293 (852)
Q Consensus 227 ~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~ip~~L~~li~~lL~~n 293 (852)
..+..|+|||.+.+..++.++|+|||||++|+|++ |..||..... ......+|..+.+++.+||..+
T Consensus 157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 236 (252)
T cd05084 157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYD 236 (252)
T ss_pred CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCC
Confidence 22346999999977778899999999999999998 8888843211 1223467889999999999999
Q ss_pred CCCCCCHHHHHHhh
Q psy3914 294 PNQRPNPADFIMRN 307 (852)
Q Consensus 294 P~~Rps~~elL~~l 307 (852)
|.+||++.++++.+
T Consensus 237 p~~Rps~~~~~~~l 250 (252)
T cd05084 237 PGQRPSFSTVHQEL 250 (252)
T ss_pred hhhCcCHHHHHHHH
Confidence 99999999998764
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=290.88 Aligned_cols=245 Identities=16% Similarity=0.210 Sum_probs=201.4
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTL-RHPSILTFLDSVESPS 130 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~ 130 (852)
..+|++.+.+| .|+++.||+|..+.+++.|++|++.. ......+.+|+.+++.+ +||||+++++++....
T Consensus 21 ~~~y~~~~~l~--------~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~ 92 (291)
T cd06639 21 TDTWEIIETIG--------KGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKAD 92 (291)
T ss_pred CCCeEEEEEee--------cCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecc
Confidence 45699999999 89999999999999999999999976 33446778899999999 7999999999987531
Q ss_pred ---CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 131 ---KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 131 ---~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
...+|+||||+. +|.+++.........+++..+..++.||+.||.||| +.+++||||+|+||+++.++.+||+|
T Consensus 93 ~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~ivH~dlkp~nili~~~~~~kl~d 171 (291)
T cd06639 93 KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH-NNRIIHRDVKGNNILLTTEGGVKLVD 171 (291)
T ss_pred ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccCCCHHHEEEcCCCCEEEee
Confidence 246899999997 788888544444567899999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCC-----CCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSH-----VTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------- 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-----~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------- 272 (852)
||++........ ......++..|+|||++... .++.++|+|||||++|+|++|..||......
T Consensus 172 fg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~ 247 (291)
T cd06639 172 FGVSAQLTSTRL----RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR 247 (291)
T ss_pred cccchhcccccc----cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhc
Confidence 999875432111 11234567789999997322 3678999999999999999999998543211
Q ss_pred ------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 273 ------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 273 ------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
.....++..+.+++.+||..+|..||++.++++| +||+
T Consensus 248 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~-----~~~~ 291 (291)
T cd06639 248 NPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH-----PFIK 291 (291)
T ss_pred CCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC-----cccC
Confidence 1233566789999999999999999999999998 8874
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-32 Score=288.33 Aligned_cols=239 Identities=14% Similarity=0.199 Sum_probs=198.9
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC--------CchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA--------DTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~--------~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
.|++++.|| .|+++.||.|.. .+|+.++||.+... .....+.+|+.+|+.++||||+++++++
T Consensus 1 ~~~~~~~ig--------~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 71 (265)
T cd06631 1 EWTKGEVLG--------KGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTC 71 (265)
T ss_pred CccccceEe--------ccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEe
Confidence 388899999 899999999987 47889999988752 1235688999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
.+. ..+|+|+||+. +|.+++.+ ...+++..+..++.||+.||.||| +.+++|+||+|+||+++.+|.++|+
T Consensus 72 ~~~--~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p~nil~~~~~~~~l~ 144 (265)
T cd06631 72 LDD--NTISIFMEFVPGGSISSILNR----FGPLPEPVFCKYTKQILDGVAYLH-NNCVVHRDIKGNNVMLMPNGIIKLI 144 (265)
T ss_pred ecC--CeEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCcCHHhEEECCCCeEEec
Confidence 987 89999999997 78888843 246789999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccC--CCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------
Q psy3914 205 GLEYMEKISEASC--IPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------- 272 (852)
Q Consensus 205 DFg~a~~~~~~~~--~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------- 272 (852)
|||++........ ..........++..|+|||++.+..++.++|+|||||++|+|++|..||......
T Consensus 145 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~ 224 (265)
T cd06631 145 DFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHR 224 (265)
T ss_pred cchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhcc
Confidence 9999875422110 1111122345788999999997778889999999999999999999999543211
Q ss_pred ----cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 ----SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 ----~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.....++..+.+++++||..+|.+||++.+++.| +||
T Consensus 225 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~-----~~~ 265 (265)
T cd06631 225 GLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH-----DFL 265 (265)
T ss_pred CCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC-----CCC
Confidence 1234567889999999999999999999999997 776
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-32 Score=291.68 Aligned_cols=240 Identities=15% Similarity=0.256 Sum_probs=202.3
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.|+..+.|| .|+++.||.|.++.++..|+||++... .....+.+|++++++++||||+++++.+.+.
T Consensus 5 ~y~~~~~lg--------~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 74 (277)
T cd06640 5 LFTKLERIG--------KGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG-- 74 (277)
T ss_pred hhhhhhhcc--------cCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC--
Confidence 378888999 899999999999999999999998862 2345788999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
...|+||||+. +|.+++.. +.+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++
T Consensus 75 ~~~~lv~e~~~~~~L~~~i~~-----~~l~~~~~~~~~~~l~~~l~~lh-~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~ 148 (277)
T cd06640 75 TKLWIIMEYLGGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYLH-SEKKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred CEEEEEEecCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH-hCCccCcCCChhhEEEcCCCCEEEcccccc
Confidence 89999999998 78888732 46889999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------cCcCC
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------SNIDN 277 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------~~~~~ 277 (852)
....... .......++..|+|||++.+..++.++|+|||||++|+|++|..||.+.... .....
T Consensus 149 ~~~~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 224 (277)
T cd06640 149 GQLTDTQ----IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGE 224 (277)
T ss_pred eeccCCc----cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchh
Confidence 6543211 1112234677899999987777888999999999999999999998543211 12235
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHH
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLI 319 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv 319 (852)
+|..+.+++.+||..+|..||++.+++.| +||.+...
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~-----~~~~~~~~ 261 (277)
T cd06640 225 FSKPFKEFIDACLNKDPSFRPTAKELLKH-----KFIVKNAK 261 (277)
T ss_pred hhHHHHHHHHHHcccCcccCcCHHHHHhC-----hHhhhcch
Confidence 67889999999999999999999999997 78765443
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=302.00 Aligned_cols=243 Identities=16% Similarity=0.241 Sum_probs=198.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
.+|++.+.|| .|+++.||.|+++.+|+.|+||++.. ......+.+|+.+++.++||||+++++++....
T Consensus 5 ~~y~i~~~lg--------~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 76 (336)
T cd07849 5 PRYQNLSYIG--------EGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPS 76 (336)
T ss_pred cceEEEEEEE--------ecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeeccc
Confidence 4699999999 89999999999999999999999865 234456778999999999999999999876541
Q ss_pred ---CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 131 ---KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 131 ---~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
...+|+|+||+. +|..++. ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+||
T Consensus 77 ~~~~~~~~lv~e~~~~~l~~~~~-----~~~l~~~~~~~i~~ql~~aL~~LH-~~~ivH~dlkp~Nill~~~~~~kl~df 150 (336)
T cd07849 77 FESFNDVYIVQELMETDLYKLIK-----TQHLSNDHIQYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTNCDLKICDF 150 (336)
T ss_pred ccccceEEEEehhcccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccCCCHHHEEECCCCCEEECcc
Confidence 146899999999 6776663 246899999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------ 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------ 273 (852)
|++........ .........++..|+|||.+ ....++.++|+|||||++|+|++|..||.+.....
T Consensus 151 g~~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~ 229 (336)
T cd07849 151 GLARIADPEHD-HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTP 229 (336)
T ss_pred cceeecccccc-ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCC
Confidence 99875432111 11122235678899999987 44567889999999999999999999985431100
Q ss_pred ------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 ------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....++..+.+++.+||+.+|.+||++.++++| +||+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h-----p~~~~ 297 (336)
T cd07849 230 SQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH-----PYLEQ 297 (336)
T ss_pred CHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC-----ccccc
Confidence 013456789999999999999999999999998 78863
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-32 Score=285.51 Aligned_cols=237 Identities=15% Similarity=0.223 Sum_probs=203.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.|++.+.|| .|+++.||+|+++.+++.|+||++... .....+.+|+..+..++||||+++++.+...
T Consensus 2 ~~~~~~~i~--------~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 71 (264)
T cd06623 2 DLERVKVLG--------QGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKE-- 71 (264)
T ss_pred cceeeeeee--------ecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccC--
Confidence 488999999 899999999999999999999999873 2467889999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-CCceecccCCCCEEEccCCcEEEcccch
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLIND-ADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~-~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+|+||||+. +|.+++... ..+++..+..++.||+.||.||| + .+++||||+|+||+++.+|.++|+|||+
T Consensus 72 ~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh-~~~~~~H~~l~~~ni~~~~~~~~~l~df~~ 146 (264)
T cd06623 72 GEISIVLEYMDGGSLADLLKKV----GKIPEPVLAYIARQILKGLDYLH-TKRHIIHRDIKPSNLLINSKGEVKIADFGI 146 (264)
T ss_pred CeEEEEEEecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHh-ccCCCccCCCCHHHEEECCCCCEEEccCcc
Confidence 89999999998 798888432 67899999999999999999999 7 9999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc---------------ccc
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK---------------SLS 273 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~---------------~l~ 273 (852)
+........ ......++..|+|||.+....++.++|+|+|||++|+|++|..||.... ...
T Consensus 147 ~~~~~~~~~----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 222 (264)
T cd06623 147 SKVLENTLD----QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPS 222 (264)
T ss_pred ceecccCCC----cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCC
Confidence 875432111 1113346778999999977788899999999999999999999985442 111
Q ss_pred CcCC-CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 274 NIDN-IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 274 ~~~~-ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
.... +|..+.+++.+||..+|..||++.+++++ +||+
T Consensus 223 ~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~-----~~~~ 260 (264)
T cd06623 223 LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH-----PFIK 260 (264)
T ss_pred CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC-----HHHH
Confidence 1233 78899999999999999999999999997 6764
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=283.43 Aligned_cols=235 Identities=17% Similarity=0.276 Sum_probs=200.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|++|.||.++...++..|++|.++. ......+.+|+.++++++||||+++++++.+.
T Consensus 1 ~y~~~~~ig--------~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~- 71 (256)
T cd08221 1 HYIPIRVLG--------KGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD- 71 (256)
T ss_pred CceEeeEec--------ccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC-
Confidence 489999999 89999999999999999999999876 23345678999999999999999999999987
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..++++|||+. +|.+++.+.. ...+++..+..++.|++.+|.||| +.+++||||+|+||+++.++.+||+|||+
T Consensus 72 -~~~~~~~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh-~~~i~h~dl~p~ni~~~~~~~~kl~d~~~ 147 (256)
T cd08221 72 -NTLLIEMEYANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIH-KAGILHRDIKTLNIFLTKAGLIKLGDFGI 147 (256)
T ss_pred -CeEEEEEEecCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHH-hCCccccCCChHhEEEeCCCCEEECcCcc
Confidence 89999999997 7988884321 356899999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------cCcC
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------SNID 276 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------~~~~ 276 (852)
+........ ......+++.|+|||+..+..++.++|+|||||++|+|++|..||.+.... ....
T Consensus 148 ~~~~~~~~~----~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (256)
T cd08221 148 SKILGSEYS----MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVS 223 (256)
T ss_pred eEEcccccc----cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCcc
Confidence 875433221 122345788999999997777888999999999999999999998543221 1124
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.++..+.+++.+||..+|..||++.+++++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 224 VYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred ccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 578899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-32 Score=292.49 Aligned_cols=241 Identities=16% Similarity=0.235 Sum_probs=198.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-CchHHHHHHHHHHHhC-CCCCcceEeeeEEcC--
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-DTYEPALSYVKKLKTL-RHPSILTFLDSVESP-- 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~-- 129 (852)
..|++.+.+| .|+++.||.|.++.+++.|++|++... .....+.+|+.+++++ +||||+++++.+...
T Consensus 16 ~~~~~~~~lg--------~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 87 (282)
T cd06636 16 GIFELVEVVG--------NGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSP 87 (282)
T ss_pred hhhhhheeec--------cCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccc
Confidence 4699999999 899999999999999999999999872 3445678899999998 699999999988532
Q ss_pred --CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 130 --SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 130 --~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
....+|++|||+. +|.+++... ....+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+|
T Consensus 88 ~~~~~~~~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH-~~~ivH~dl~~~nili~~~~~~~l~d 164 (282)
T cd06636 88 PGHDDQLWLVMEFCGAGSVTDLVKNT--KGNALKEDWIAYICREILRGLAHLH-AHKVIHRDIKGQNVLLTENAEVKLVD 164 (282)
T ss_pred cCCCCEEEEEEEeCCCCcHHHHHHHc--cCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEECCCCCEEEee
Confidence 1268999999998 688887432 2345788899999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCcccc-----CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-----SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------- 273 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-----~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------- 273 (852)
||++....... .......++..|+|||++. ...++.++|+|||||++|+|++|..||.......
T Consensus 165 fg~~~~~~~~~----~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~ 240 (282)
T cd06636 165 FGVSAQLDRTV----GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR 240 (282)
T ss_pred Ccchhhhhccc----cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhh
Confidence 99987442211 1122355778999999973 3457788999999999999999999985432111
Q ss_pred ------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 274 ------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 274 ------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
....+|..+.+++.+||+.||.+||++.++++| +||
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~-----~~~ 282 (282)
T cd06636 241 NPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH-----PFI 282 (282)
T ss_pred CCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC-----CCC
Confidence 123578899999999999999999999999997 776
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-32 Score=293.67 Aligned_cols=241 Identities=17% Similarity=0.269 Sum_probs=197.2
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|++++||+|+++.+|+.|+||.+.. ......+.+|+++++.++||||+++++++.+.
T Consensus 3 ~y~~~~~l~--------~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 73 (294)
T PLN00009 3 QYEKVEKIG--------EGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE- 73 (294)
T ss_pred ceEEEEEec--------CCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecC-
Confidence 599999999 89999999999999999999999875 22345688999999999999999999999987
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc-CCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS-CGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~-~g~~KL~DFg~ 208 (852)
...|+||||+. +|..++... ....+++..+..++.||+.||.||| +.+++|+||+|+||+++. ++.+||+|||+
T Consensus 74 -~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH-~~~i~H~dl~p~nill~~~~~~~kl~dfg~ 149 (294)
T PLN00009 74 -KRLYLVFEYLDLDLKKHMDSS--PDFAKNPRLIKTYLYQILRGIAYCH-SHRVLHRDLKPQNLLIDRRTNALKLADFGL 149 (294)
T ss_pred -CeEEEEEecccccHHHHHHhC--CCCCcCHHHHHHHHHHHHHHHHHHH-hCCeeCCCCCcceEEEECCCCEEEEccccc
Confidence 89999999998 677766321 2234678888899999999999999 899999999999999986 55799999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc--------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS-------------- 273 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~-------------- 273 (852)
+...... ........+++.|+|||++.+ ..++.++|+|||||++|+|++|..||.+.....
T Consensus 150 ~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 225 (294)
T PLN00009 150 ARAFGIP----VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNE 225 (294)
T ss_pred ccccCCC----ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 8643221 111223345778999999843 567889999999999999999999985332100
Q ss_pred --------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 274 --------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 274 --------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
....+++.+.+++.+||+.+|.+||++.++++| +||.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~-----~~~~~~ 290 (294)
T PLN00009 226 ETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH-----EYFKDL 290 (294)
T ss_pred hhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC-----chHhHH
Confidence 013567889999999999999999999999997 888653
|
|
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-32 Score=284.66 Aligned_cols=232 Identities=19% Similarity=0.268 Sum_probs=197.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC-------chHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD-------TYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~-------~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
+|+.++.|| .|+++.||+|..+.++..|+||.+.... ....+.+|+.+++.++||||+++++.+.
T Consensus 1 ~~~~~~~ig--------~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~ 72 (258)
T cd06632 1 RWRKGELLG--------SGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER 72 (258)
T ss_pred Cccccceee--------ecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe
Confidence 478889999 8999999999999899999999987622 4467889999999999999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
.. ..+|+|+||+. +|.+++.+ ...+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.+||+|
T Consensus 73 ~~--~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl~~~ni~~~~~~~~kl~d 145 (258)
T cd06632 73 EE--DNLYIFLELVPGGSLAKLLKK----YGSFPEPVIRLYTRQILLGLEYLH-DRNTVHRDIKGANILVDTNGVVKLAD 145 (258)
T ss_pred cC--CeEEEEEEecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEECCCCCEEEcc
Confidence 87 89999999997 78888843 246889999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCC-CCcchhHHhHHHHHHHHHhCCCCCCCCccc------------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHV-TKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------ 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------ 272 (852)
||++....... ......++..|++||.+.... ++.++|+|||||++|+|++|..||......
T Consensus 146 ~~~~~~~~~~~-----~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 220 (258)
T cd06632 146 FGMAKQVVEFS-----FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKEL 220 (258)
T ss_pred Cccceeccccc-----cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccC
Confidence 99987442211 122345777899999985554 888999999999999999999998543211
Q ss_pred -cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 273 -SNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 273 -~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.....+++.+.+++.+||..+|.+||++.+++.|
T Consensus 221 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 221 PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 1234567889999999999999999999999997
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=284.80 Aligned_cols=237 Identities=17% Similarity=0.260 Sum_probs=199.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|.+.+.|| .|+++.||.|....++..|+||++... .....+.+|+.+++.++||||+++++.+.+.
T Consensus 1 ~y~~~~~lg--------~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~- 71 (264)
T cd06626 1 RWQRGNKIG--------GGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHR- 71 (264)
T ss_pred CceeeeEee--------cCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecC-
Confidence 589999999 899999999999999999999999872 2466889999999999999999999998877
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+|+|+||+. +|.+++.+ ...+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.+||+|||+
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh-~~~i~H~dl~~~nil~~~~~~~kl~d~g~ 145 (264)
T cd06626 72 -EKVYIFMEYCSGGTLEELLEH----GRILDEHVIRVYTLQLLEGLAYLH-SHGIVHRDIKPANIFLDHNGVIKLGDFGC 145 (264)
T ss_pred -CEEEEEEecCCCCcHHHHHhh----cCCCChHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEECCCCCEEEccccc
Confidence 89999999998 68888742 245788999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCC---CCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHV---TKCSTDMYGLGILIWEVFNGPLQSTNRKS-------------- 271 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~---~~~~sDIwSLG~ll~el~tG~~pf~~~~~-------------- 271 (852)
+..................++..|+|||++.+.. ++.++|+|+|||++|++++|..||.+...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 225 (264)
T cd06626 146 AVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKP 225 (264)
T ss_pred ccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCC
Confidence 8755432222111122355677999999985544 78899999999999999999999853311
Q ss_pred -ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 272 -LSNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 272 -l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
......++..+.+++++||+.+|.+||++.+++.|
T Consensus 226 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 226 PIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred CCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 11123457889999999999999999999999987
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=307.07 Aligned_cols=241 Identities=18% Similarity=0.225 Sum_probs=195.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCC-----CeEEEEEEEeCC---CchHHHHHHHHHHHhC-CCCCcceEee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS-----NEKVTIFLNDSA---DTYEPALSYVKKLKTL-RHPSILTFLD 124 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~-----g~~VaVKv~~~~---~~~~~~~~E~~~Lk~L-rHPnIlk~~d 124 (852)
.+|++++.|| .|+||.||.|+.... +..|+||++... .....+.+|+.+++.+ +||||+++++
T Consensus 38 ~~~~~~~~LG--------~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~ 109 (374)
T cd05106 38 DNLQFGKTLG--------AGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLG 109 (374)
T ss_pred HHceehheec--------CCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEee
Confidence 3599999999 999999999986544 358999999762 2345678999999999 8999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhh-------------------------------------------------
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLK------------------------------------------------- 153 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~------------------------------------------------- 153 (852)
.+... ..+|+||||+. +|.+++.+...
T Consensus 110 ~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (374)
T cd05106 110 ACTHG--GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPV 187 (374)
T ss_pred EecCC--CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCc
Confidence 99987 89999999998 79888853211
Q ss_pred -----------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhcccccc
Q psy3914 154 -----------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEAS 216 (852)
Q Consensus 154 -----------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~ 216 (852)
....++...+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||+++......
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH-~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~ 266 (374)
T cd05106 188 SSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA-SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDS 266 (374)
T ss_pred cccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH-HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCc
Confidence 0124778889999999999999999 8999999999999999999999999999987543221
Q ss_pred CCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-------------ccCcCCCChhH
Q psy3914 217 CIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS-------------LSNIDNIPENL 282 (852)
Q Consensus 217 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~-------------l~~~~~ip~~L 282 (852)
. ........++..|+|||++.+..++.++|||||||++|+|++ |..||..... ......+|+.+
T Consensus 267 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 344 (374)
T cd05106 267 N--YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEI 344 (374)
T ss_pred c--eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHH
Confidence 1 111112234567999999977789999999999999999997 9999854321 11234578999
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 283 KRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 283 ~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.+++.+||+.+|..||++.++++.+
T Consensus 345 ~~li~~cl~~dp~~RPs~~~l~~~l 369 (374)
T cd05106 345 YSIMKMCWNLEPTERPTFSQISQLI 369 (374)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHH
Confidence 9999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-32 Score=287.70 Aligned_cols=228 Identities=18% Similarity=0.275 Sum_probs=195.2
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PI 144 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L 144 (852)
.|+++.||.|+...+++.|+||++.. ......+.+|+++++.++||||+++++.++++ ..+|+|+||+. +|
T Consensus 3 ~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L 80 (262)
T cd05572 3 VGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDK--KYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcC--CccEEEEecCCCCcH
Confidence 78999999999999999999999976 23446789999999999999999999999987 89999999987 79
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccc
Q psy3914 145 FYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYS 224 (852)
Q Consensus 145 ~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~ 224 (852)
.+++.+ ...+++..+..++.||+.||.||| +.+++|+||+|+||+++.+|.++|+|||++....... ...
T Consensus 81 ~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lH-~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-----~~~ 150 (262)
T cd05572 81 WTILRD----RGLFDEYTARFYIACVVLAFEYLH-NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-----KTW 150 (262)
T ss_pred HHHHhh----cCCCCHHHHHHHHHHHHHHHHHHh-hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-----ccc
Confidence 888843 245889999999999999999999 8999999999999999999999999999987543221 112
Q ss_pred cccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc---------------cccCcCCCChhHHHHHHHh
Q psy3914 225 RYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK---------------SLSNIDNIPENLKRVYLEL 289 (852)
Q Consensus 225 ~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~---------------~l~~~~~ip~~L~~li~~l 289 (852)
...++..|++||.+.+..++.++|+|+|||++|+|++|..||.+.. ....+..+++.+.+++.+|
T Consensus 151 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 230 (262)
T cd05572 151 TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQL 230 (262)
T ss_pred cccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHH
Confidence 3456779999999877778889999999999999999999996443 1112335578999999999
Q ss_pred ccCCCCCCCC-----HHHHHHhhcCCCCCCcc
Q psy3914 290 ISERPNQRPN-----PADFIMRNRKPGGYFKN 316 (852)
Q Consensus 290 L~~nP~~Rps-----~~elL~~l~~~~~fF~n 316 (852)
|..+|.+||+ +.++++| +||++
T Consensus 231 l~~~p~~R~~~~~~~~~~l~~~-----~~~~~ 257 (262)
T cd05572 231 LRRNPEERLGNLKGGIKDIKKH-----KWFNG 257 (262)
T ss_pred ccCChhhCcCCcccCHHHHhcC-----hhhhC
Confidence 9999999999 9999997 89875
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >KOG0662|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-33 Score=267.21 Aligned_cols=239 Identities=21% Similarity=0.270 Sum_probs=205.5
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
.|.-.++|| +|.||+||+|+++.+++.|++|.... +..-..+.+|+-+|+.|+|.||++++++...+
T Consensus 3 ~ydkmekig--------egtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsd- 73 (292)
T KOG0662|consen 3 KYDKMEKIG--------EGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD- 73 (292)
T ss_pred chHHHHhhc--------CCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC-
Confidence 477788999 99999999999999999999998877 33456789999999999999999999999988
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+.+-+|+|||. +|..++. ..++.++.+.++.++.|+++||.|+| +.++.|||+||.|++|+.+|++||+|||++
T Consensus 74 -kkltlvfe~cdqdlkkyfd---slng~~d~~~~rsfmlqllrgl~fch-shnvlhrdlkpqnllin~ngelkladfgla 148 (292)
T KOG0662|consen 74 -KKLTLVFEFCDQDLKKYFD---SLNGDLDPEIVRSFMLQLLRGLGFCH-SHNVLHRDLKPQNLLINRNGELKLADFGLA 148 (292)
T ss_pred -ceeEEeHHHhhHHHHHHHH---hcCCcCCHHHHHHHHHHHHhhhhhhh-hhhhhhccCCcceEEeccCCcEEecccchh
Confidence 89999999999 7877774 34588999999999999999999999 999999999999999999999999999999
Q ss_pred hccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCccccC-------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKSLSN------------- 274 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~l~~------------- 274 (852)
+ ....|...++..+.|..|++|.++ ...-|+.+.|+||-||++.|+.+ |.+.|.|.+-.++
T Consensus 149 r----afgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~e 224 (292)
T KOG0662|consen 149 R----AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE 224 (292)
T ss_pred h----hcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCcc
Confidence 8 556778788888889999999998 66779999999999999999998 5555654321110
Q ss_pred -----c----------------------CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 275 -----I----------------------DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 275 -----~----------------------~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
+ .++...=+++++++|.-||..|.+++..++| +||.+
T Consensus 225 d~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh-----pyf~d 288 (292)
T KOG0662|consen 225 DQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH-----PYFSD 288 (292)
T ss_pred ccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC-----ccccc
Confidence 0 1222234789999999999999999999998 89865
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=302.06 Aligned_cols=244 Identities=16% Similarity=0.238 Sum_probs=200.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|+++.||+|.++.+|..|+||++.. ......+.+|+.+|+.++||||++++++++..
T Consensus 5 ~~y~~~~~lg--------~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 76 (334)
T cd07855 5 SRYKPIENIG--------SGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPP 76 (334)
T ss_pred hceeeeeeee--------cCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhcccc
Confidence 5699999999 89999999999999999999999876 23445677899999999999999999987643
Q ss_pred --CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 130 --SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 130 --~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
....+|+||||+. +|.+++. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+||
T Consensus 77 ~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~dlkp~Nil~~~~~~~kl~df 151 (334)
T cd07855 77 GADFKDVYVVMDLMESDLHHIIH----SDQPLTEEHIRYFLYQLLRGLKYIH-SANVIHRDLKPSNLLVNEDCELRIGDF 151 (334)
T ss_pred CCCCceEEEEEehhhhhHHHHhc----cCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHEEEcCCCcEEeccc
Confidence 1257999999998 6666662 3356899999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------ 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------ 273 (852)
|++..................++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.....
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~ 231 (334)
T cd07855 152 GMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSP 231 (334)
T ss_pred ccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCC
Confidence 9987543322221222223467889999999743 557889999999999999999999985432100
Q ss_pred ------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 274 ------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 274 ------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
....++..+.+++++||+.+|.+||++.+++.| +||.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~-----~~~~ 298 (334)
T cd07855 232 SEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH-----PFLA 298 (334)
T ss_pred hhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC-----hhhh
Confidence 013468889999999999999999999999997 7885
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=301.28 Aligned_cols=241 Identities=15% Similarity=0.181 Sum_probs=199.9
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.|| .|++|.||.++++.+++.|+||++.+ ......+.+|..+++.++||||+++++.+++.
T Consensus 2 ~y~i~~~lG--------~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~ 73 (331)
T cd05624 2 DFEIIKVIG--------RGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDE 73 (331)
T ss_pred CceEEEEEe--------eCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC
Confidence 599999999 99999999999999999999999975 22344578889999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+++||||||+. +|.+++.+. ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||
T Consensus 74 --~~~~lv~Ey~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~~L~~lH-~~~iiHrDlkp~Nill~~~~~~kl~DfG 147 (331)
T cd05624 74 --NYLYLVMDYYVGGDLLTLLSKF---EDRLPEDMARFYIAEMVLAIHSIH-QLHYVHRDIKPDNVLLDMNGHIRLADFG 147 (331)
T ss_pred --CEEEEEEeCCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeccCchHHEEEcCCCCEEEEecc
Confidence 89999999997 798888432 357889999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccC-----CCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-----HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------- 272 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-----~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------- 272 (852)
++..+..... .......|++.|+|||++.+ ..++.++|+|||||++|+|++|..||.+....
T Consensus 148 ~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~ 224 (331)
T cd05624 148 SCLKMNQDGT---VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHE 224 (331)
T ss_pred ceeeccCCCc---eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCC
Confidence 9875432111 11123468899999999743 45778999999999999999999999643211
Q ss_pred ------cCcCCCChhHHHHHHHhccCCCCC--CCCHHHHHHhhcCCCCCCcch
Q psy3914 273 ------SNIDNIPENLKRVYLELISERPNQ--RPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 ------~~~~~ip~~L~~li~~lL~~nP~~--Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....++..+.+++.+||...+.+ |+++.++++| +||++.
T Consensus 225 ~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h-----~~f~~~ 272 (331)
T cd05624 225 ERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH-----AFFEGI 272 (331)
T ss_pred CcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC-----CCcCCC
Confidence 112456889999999999876654 5689999987 899764
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=286.14 Aligned_cols=237 Identities=12% Similarity=0.168 Sum_probs=194.6
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-------CchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-------DTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-------~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
.|++++.|| .|+++.||.|.++.+|..|+||++... .....+.+|+++++.++||||+++++.+.
T Consensus 3 ~~~~~~~l~--------~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 74 (265)
T cd06652 3 NWRLGKLLG--------QGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLR 74 (265)
T ss_pred cceEeeEEe--------cCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEec
Confidence 589999999 899999999999999999999988641 12357788999999999999999999987
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
+.....+|+||||+. +|.+++.+ ...+++..+..++.||+.||.||| +.+++|+||+|+||+++.+|.++|+|
T Consensus 75 ~~~~~~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH-~~~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 75 DPMERTLSIFMEHMPGGSIKDQLKS----YGALTENVTRKYTRQILEGVSYLH-SNMIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred cCCCceEEEEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-hCCEecCCCCHHHEEecCCCCEEECc
Confidence 643367899999997 68888742 245788899999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-------------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------- 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------- 272 (852)
||++........ .........++..|+|||++.+..++.++|+|||||++|+|++|..||.+....
T Consensus 150 fg~~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 228 (265)
T cd06652 150 FGASKRLQTICL-SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNP 228 (265)
T ss_pred Cccccccccccc-cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCC
Confidence 999875432111 111122345778999999997777888999999999999999999998543211
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
..+..++..+.+++++|+. +|+.||+++++++|
T Consensus 229 ~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 229 VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 1223456678899999994 99999999999997
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-32 Score=290.75 Aligned_cols=241 Identities=19% Similarity=0.230 Sum_probs=196.5
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEc----CCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKK----GSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k----~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
.|++.+.|| .|+++.||+|... .++..|+||.+... .....+.+|+.+++.++||||+++++++.
T Consensus 6 ~~~~~~~lg--------~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 77 (283)
T cd05090 6 AVRFMEELG--------ECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT 77 (283)
T ss_pred hceeeeecc--------ccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe
Confidence 378899999 9999999999853 45678999998752 22356789999999999999999999998
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhh-------------hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCC
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTL-------------KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTS 192 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~-------------~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~N 192 (852)
.. ...|+||||+. +|.+++.... .....+++..+..++.||+.||.||| +.+++||||||+|
T Consensus 78 ~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH-~~~i~H~dlkp~n 154 (283)
T cd05090 78 QE--QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS-SHFFVHKDLAARN 154 (283)
T ss_pred cC--CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH-hcCeehhccccce
Confidence 87 88999999998 7988884221 01234788889999999999999999 8999999999999
Q ss_pred EEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc
Q psy3914 193 IFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS 271 (852)
Q Consensus 193 IlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~ 271 (852)
|+++.++.+||+|||++........ ....+...++..|+|||++.+..++.++|+|||||++|||++ |..||.+...
T Consensus 155 ili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~ 232 (283)
T cd05090 155 ILIGEQLHVKISDLGLSREIYSADY--YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN 232 (283)
T ss_pred EEEcCCCcEEeccccccccccCCcc--eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH
Confidence 9999999999999999875432111 111223344567999999977778899999999999999998 8888854321
Q ss_pred ------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 272 ------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 272 ------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
......+|..+.+++.+||+.+|.+||++.+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 233 QEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 2234568899999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-32 Score=289.86 Aligned_cols=246 Identities=18% Similarity=0.275 Sum_probs=203.6
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCC---CCCcceEeeeEEcC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLR---HPSILTFLDSVESP 129 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~Lr---HPnIlk~~d~~e~~ 129 (852)
|++.+.|| .|+++.||+|.+..++..|+||++.. ......+.+|+.+++.++ ||||+++++++...
T Consensus 3 y~~~~~l~--------~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~ 74 (277)
T cd06917 3 YQRLELIG--------RGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG 74 (277)
T ss_pred hhhhhhee--------ccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC
Confidence 78888999 89999999999999999999999876 234566888999999997 99999999999887
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
...|+||||+. +|.+++.. ..+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.++|+|||
T Consensus 75 --~~~~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lh-~~~i~H~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06917 75 --PRLWIIMEYAEGGSVRTLMKA-----GPIAEKYISVIIREVLVALKYIH-KVGVIHRDIKAANILVTNTGNVKLCDFG 146 (277)
T ss_pred --CEEEEEEecCCCCcHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCcCHHHEEEcCCCCEEEccCC
Confidence 89999999997 78887732 36889999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN------------ 274 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~------------ 274 (852)
++....... .......|+..|+|||.+. +..++.++|+|||||++|+|++|..||.+......
T Consensus 147 ~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~ 222 (277)
T cd06917 147 VAALLNQNS----SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRL 222 (277)
T ss_pred ceeecCCCc----cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCC
Confidence 987543322 1112345777899999984 45578899999999999999999999954422110
Q ss_pred -cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHHHHHHHHH
Q psy3914 275 -IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLE 326 (852)
Q Consensus 275 -~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv~~l~~Le 326 (852)
...++..+.+++.+||+.+|.+||++.+++.+ +||.+........+.
T Consensus 223 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~-----~~~~~~~~~~~~~~~ 270 (277)
T cd06917 223 EDNGYSKLLREFVAACLDEEPKERLSAEELLKS-----KWIKAHSKTPVSILK 270 (277)
T ss_pred CcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC-----hHhhccccCchhhHH
Confidence 11377899999999999999999999999997 888765443333333
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-31 Score=281.85 Aligned_cols=234 Identities=18% Similarity=0.217 Sum_probs=198.5
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|+++.||.|....+++.|+||.+.. ......+.+|+++|+.++||||+++++.+...
T Consensus 1 ~y~~~~~lg--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~- 71 (256)
T cd08220 1 KYEKIRVVG--------RGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLED- 71 (256)
T ss_pred CceEEEEec--------ccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecC-
Confidence 489999999 89999999999999999999999876 22456788999999999999999999999877
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC-cEEEcccc
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG-EWKLGGLE 207 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g-~~KL~DFg 207 (852)
..+|+||||+. +|.+++... ....+++..+..++.|++.+|.||| +++++|+||+|+||+++.++ .+||+|||
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh-~~~i~h~dl~~~nil~~~~~~~~~l~d~~ 147 (256)
T cd08220 72 -KALMIVMEYAPGGTLAEYIQKR--CNSLLDEDTILHFFVQILLALHHVH-TKLILHRDLKTQNILLDKHKMVVKIGDFG 147 (256)
T ss_pred -CEEEEEEecCCCCCHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEEcCCCCEEEEccCC
Confidence 89999999997 799988532 1245889999999999999999999 89999999999999998654 57999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc------------ccCc
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS------------LSNI 275 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------------l~~~ 275 (852)
++........ .....++..|+|||.+.+..++.++|+|||||++|+|++|..||.+... ....
T Consensus 148 ~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (256)
T cd08220 148 ISKILSSKSK-----AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPIS 222 (256)
T ss_pred CceecCCCcc-----ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCC
Confidence 9875432211 1124567799999999777788899999999999999999999854321 1123
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
..++..+.+++.+||..+|.+||++.+++.|
T Consensus 223 ~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 223 DRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 4578899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=291.67 Aligned_cols=236 Identities=16% Similarity=0.270 Sum_probs=198.8
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
|++.+.|| .|+++.||.|.+..++..|+||+++. ......+.+|+.++++++||||+++++.+... .
T Consensus 6 y~~~~~l~--------~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~ 75 (277)
T cd06642 6 FTKLERIG--------KGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKG--T 75 (277)
T ss_pred HHHHHHhc--------CCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccC--C
Confidence 77788898 89999999999999999999999875 23345788999999999999999999999987 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
..|+||||+. +|.+++. ...+++..+..++.||+.||.||| +.+++|+||+|+||+++.+|.++|+|||++.
T Consensus 76 ~~~lv~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH-~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06642 76 KLWIIMEYLGGGSALDLLK-----PGPLEETYIATILREILKGLDYLH-SERKIHRDIKAANVLLSEQGDVKLADFGVAG 149 (277)
T ss_pred ceEEEEEccCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHh-cCCeeccCCChheEEEeCCCCEEEccccccc
Confidence 9999999998 6877773 256889999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------cCcCCC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------SNIDNI 278 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------~~~~~i 278 (852)
.+.... .......++..|+|||++.+..++.++|+|||||++|+|++|..|+...... .....+
T Consensus 150 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (277)
T cd06642 150 QLTDTQ----IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQY 225 (277)
T ss_pred cccCcc----hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCccc
Confidence 543211 1111234677899999997778889999999999999999999998532111 112356
Q ss_pred ChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 279 PENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 279 p~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
+..+.+++.+||..+|..||++.+++.| +||..
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~il~~-----~~~~~ 258 (277)
T cd06642 226 SKPFKEFVEACLNKDPRFRPTAKELLKH-----KFITR 258 (277)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHh-----HHHHH
Confidence 7889999999999999999999999998 66643
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >KOG2345|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=277.30 Aligned_cols=247 Identities=17% Similarity=0.227 Sum_probs=205.1
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+.+|+|.+.+| .|+|..||.+....++..+|+|.+-. ....+.+.+|+...++++||||++++++...+
T Consensus 19 n~~Ryri~~~Lg--------eGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~ 90 (302)
T KOG2345|consen 19 NNKRYRIQRLLG--------EGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLRE 90 (302)
T ss_pred cCceEEEeeeec--------CCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHh
Confidence 456899999999 99999999999999999999998876 45678899999999999999999999875432
Q ss_pred ---CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC--ceecccCCCCEEEccCCcEE
Q psy3914 130 ---SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDAD--LRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 130 ---~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~--ivH~DIkp~NIlV~~~g~~K 202 (852)
.+...||+..|.. +|.+.++........+++.++.+++.+|++||++|| +.. ++||||||.||+++..|..+
T Consensus 91 ~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH-~~~~~yAH~DiKP~NILls~~~~~v 169 (302)
T KOG2345|consen 91 EKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALH-EKEPPYAHRDIKPANILLSDSGLPV 169 (302)
T ss_pred hccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHh-ccCCcccccCCCcceeEecCCCceE
Confidence 3457999999998 799999666555568999999999999999999999 777 99999999999999999999
Q ss_pred EcccchhhccccccCC-----CCcccccccCCCcccCCccc---cCCCCCcchhHHhHHHHHHHHHhCCCCCCCC-----
Q psy3914 203 LGGLEYMEKISEASCI-----PMKRYSRYEDQSTYQIPENS---LSHVTKCSTDMYGLGILIWEVFNGPLQSTNR----- 269 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~-----~~~~~~~~~gt~~Y~APE~~---~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~----- 269 (852)
|.|||.++...-.... ..........|..|+|||.+ .+...+.++|||||||++|+|+.|.-||...
T Consensus 170 l~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~Gg 249 (302)
T KOG2345|consen 170 LMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGG 249 (302)
T ss_pred EEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCC
Confidence 9999998853211100 01111224567899999998 4556788999999999999999999999311
Q ss_pred ----------ccccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 270 ----------KSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 270 ----------~~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
-...+-..++..+.++++.||..+|.+||++.+++.++
T Consensus 250 SlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~ 297 (302)
T KOG2345|consen 250 SLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKL 297 (302)
T ss_pred eEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHH
Confidence 11122356889999999999999999999999999874
|
|
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-31 Score=281.79 Aligned_cols=231 Identities=17% Similarity=0.305 Sum_probs=194.6
Q ss_pred cCCceEEEEEEEcCC---CeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGS---NEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~---g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|+++.||.|..... +..|+||++.... ....+.+|++.++.++||||+++++++.+. ..+|+||||+. +
T Consensus 5 ~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~lv~e~~~~~~ 82 (262)
T cd00192 5 EGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEE--EPLYLVLEYMEGGD 82 (262)
T ss_pred cCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCC--CceEEEEEeccCCc
Confidence 899999999999866 8999999998722 257889999999999999999999999987 89999999996 7
Q ss_pred HHHHHHhhhhc-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCC
Q psy3914 144 IFYHLDNTLKE-----NNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCI 218 (852)
Q Consensus 144 L~~~L~~~~~~-----~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~ 218 (852)
|.+++...... ...+++..+..++.||+.||.||| +.+++||||+|+||+++.++.+||+|||.+........
T Consensus 83 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH-~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~- 160 (262)
T cd00192 83 LLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA-SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY- 160 (262)
T ss_pred HHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH-cCCcccCccCcceEEECCCCcEEEcccccccccccccc-
Confidence 99988543111 367899999999999999999999 89999999999999999999999999999875543211
Q ss_pred CCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCc------------cccCcCCCChhHHHH
Q psy3914 219 PMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRK------------SLSNIDNIPENLKRV 285 (852)
Q Consensus 219 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~------------~l~~~~~ip~~L~~l 285 (852)
........++..|+|||.+....++.++|+|||||++|+|++ |..||.+.. .......+|..+.++
T Consensus 161 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (262)
T cd00192 161 -YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYEL 239 (262)
T ss_pred -cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHHHH
Confidence 112223456778999999876688899999999999999999 588885432 122345678999999
Q ss_pred HHHhccCCCCCCCCHHHHHHhh
Q psy3914 286 YLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 286 i~~lL~~nP~~Rps~~elL~~l 307 (852)
+.+||..+|..||++.+++.++
T Consensus 240 i~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 240 MLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred HHHHccCCcccCcCHHHHHHhh
Confidence 9999999999999999999864
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=287.74 Aligned_cols=241 Identities=14% Similarity=0.157 Sum_probs=197.3
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCC-----CeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS-----NEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~-----g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
.+|++.+.|| .|+++.||.|..+.. +..|+||.+.... ....+.+|+.+++.++||||++++++
T Consensus 6 ~~~~~~~~lg--------~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~ 77 (277)
T cd05032 6 EKITLIRELG--------QGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGV 77 (277)
T ss_pred HHeeEEeEec--------CCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEE
Confidence 4699999999 899999999988644 4899999987622 23467889999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhh------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLK------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS 197 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~ 197 (852)
+... ...|+||||+. +|.+++..... ....+++..+..++.||+.||.||| +.+++||||+|+||+++.
T Consensus 78 ~~~~--~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~di~p~nill~~ 154 (277)
T cd05032 78 VSTG--QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA-AKKFVHRDLAARNCMVAE 154 (277)
T ss_pred EcCC--CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH-hCCccccccChheEEEcC
Confidence 9987 88999999997 79998854321 1234678889999999999999999 899999999999999999
Q ss_pred CCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCc------
Q psy3914 198 CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRK------ 270 (852)
Q Consensus 198 ~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~------ 270 (852)
+|.+||+|||+++....... ........++..|+|||.+.+..++.++|+|||||++||+++ |..||.+..
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 232 (277)
T cd05032 155 DLTVKIGDFGMTRDIYETDY--YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK 232 (277)
T ss_pred CCCEEECCcccchhhccCcc--cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH
Confidence 99999999999875432211 111122345668999999877778899999999999999998 888885432
Q ss_pred ------cccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 271 ------SLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 271 ------~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
....+..+|..+.+++.+||..+|++|||+.++++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l 275 (277)
T cd05032 233 FVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSL 275 (277)
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHh
Confidence 1223456789999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=287.69 Aligned_cols=236 Identities=15% Similarity=0.241 Sum_probs=193.2
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCC-CCCcceEeeeEEcCCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLR-HPSILTFLDSVESPSK 131 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~~~ 131 (852)
|++.+.|| .|+++.||+|.++.++..|+||++.. ........+|+..++++. ||||+++++++.+...
T Consensus 1 y~~~~~lg--------~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 72 (282)
T cd07831 1 YKILGKIG--------EGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKT 72 (282)
T ss_pred CceEeecc--------ccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCC
Confidence 67888999 89999999999999999999999876 122223457888888886 9999999999987544
Q ss_pred CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
+.+|+||||+. +|.+.+.. ....+++..+..++.||+.||.||| +.+++||||+|+||+++. |.+||+|||++.
T Consensus 73 ~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~LH-~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 73 GRLALVFELMDMNLYELIKG---RKRPLPEKRVKSYMYQLLKSLDHMH-RNGIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred CcEEEEEecCCccHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHH-HCCceecccCHHHEEEcC-CCeEEEeccccc
Confidence 68999999998 67766632 2256899999999999999999999 899999999999999999 999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc----------------
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---------------- 273 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---------------- 273 (852)
...... +. ....++..|+|||++ .+..++.++|+|||||++|||++|..||.+.+...
T Consensus 148 ~~~~~~--~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 222 (282)
T cd07831 148 GIYSKP--PY---TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEV 222 (282)
T ss_pred ccccCC--Cc---CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 543211 11 123467799999986 44557889999999999999999999985432100
Q ss_pred ------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 274 ------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 274 ------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
....+|..+.+++.+||+.+|.+||++.+++.| +||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~-----~~~ 282 (282)
T cd07831 223 LKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH-----PYF 282 (282)
T ss_pred HHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC-----CCC
Confidence 013568899999999999999999999999997 776
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >KOG4236|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=304.09 Aligned_cols=239 Identities=18% Similarity=0.265 Sum_probs=207.3
Q ss_pred eeE--eccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 56 YEV--GEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 56 Y~i--~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
|+| .+.+| +|.||+||-|+++.+|+.||||++++ ......+++|+.+|+.+.||+|+.+--.||+.
T Consensus 564 YQif~devLG--------SGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ 635 (888)
T KOG4236|consen 564 YQIFADEVLG--------SGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETP 635 (888)
T ss_pred HHhhhHhhcc--------CCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCC
Confidence 444 46788 89999999999999999999999998 45568899999999999999999999999987
Q ss_pred CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC---CcEEEcc
Q psy3914 130 SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC---GEWKLGG 205 (852)
Q Consensus 130 ~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~---g~~KL~D 205 (852)
..+++|||.+. +....+- ....+++++...+.++.||+.||.||| ..+|+|+||||+||++... -.+||||
T Consensus 636 --ervFVVMEKl~GDMLEMIL--SsEkgRL~er~TkFlvtQIL~ALr~LH-~knIvHCDLKPENVLLas~~~FPQvKlCD 710 (888)
T KOG4236|consen 636 --ERVFVVMEKLHGDMLEMIL--SSEKGRLPERITKFLVTQILVALRYLH-FKNIVHCDLKPENVLLASASPFPQVKLCD 710 (888)
T ss_pred --ceEEEEehhhcchHHHHHH--HhhcccchHHHHHHHHHHHHHHHHHhh-hcceeeccCCchheeeccCCCCCceeecc
Confidence 89999999998 5333331 245689999999999999999999999 9999999999999999875 3599999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-------------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------- 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------- 272 (852)
||+++.+++.+ .....+||+.|.|||++.++.|..+.||||+|+|+|--++|.+||.....+
T Consensus 711 FGfARiIgEks-----FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp 785 (888)
T KOG4236|consen 711 FGFARIIGEKS-----FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPP 785 (888)
T ss_pred ccceeecchhh-----hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCC
Confidence 99999776532 233678999999999999999999999999999999999999999543322
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....|+....++|..+|+..-.+|++++.-+.| +|+++-
T Consensus 786 ~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh-----~Wlq~y 825 (888)
T KOG4236|consen 786 NPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH-----PWLQDY 825 (888)
T ss_pred CchhhcCHHHHHHHHHHHHHHHHHhcchHhhccc-----hhhhcc
Confidence 1236789999999999999999999999999998 888763
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-32 Score=285.97 Aligned_cols=237 Identities=18% Similarity=0.252 Sum_probs=199.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC--chHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD--TYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~--~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
..|++++.|| .|+++.||.|..+. +..|++|++.... ....+.+|+.+++.++||||+++++++.+.
T Consensus 6 ~~y~~~~~ig--------~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 74 (261)
T cd05148 6 EEFTLERKLG--------SGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVG-- 74 (261)
T ss_pred HHHHHhhhhc--------cCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecC--
Confidence 4589999999 89999999999987 8899999998732 356789999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+|+||||+. +|.+++.+. ....++...+..++.||+.||.||| +.+++|+||+|+||+|+.++.+||+|||++
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH-~~~i~h~dl~~~nilv~~~~~~kl~d~g~~ 151 (261)
T cd05148 75 EPVYIITELMEKGSLLAFLRSP--EGQVLPVASLIDMACQVAEGMAYLE-EQNSIHRDLAARNILVGEDLVCKVADFGLA 151 (261)
T ss_pred CCeEEEEeecccCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccccCcceEEEcCCceEEEccccch
Confidence 88999999998 799988432 2346889999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCccc------------cCcC
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKSL------------SNID 276 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~l------------~~~~ 276 (852)
....+.... .....++..|+|||+.....++.++|+|||||++|+|++ |..||.+.... ....
T Consensus 152 ~~~~~~~~~----~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 227 (261)
T cd05148 152 RLIKEDVYL----SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPA 227 (261)
T ss_pred hhcCCcccc----ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCC
Confidence 755332111 112334568999999877778889999999999999998 88998543211 2235
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
.+|+.+.+++.+||..+|.+||++.++++.+.
T Consensus 228 ~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~ 259 (261)
T cd05148 228 KCPQEIYKIMLECWAAEPEDRPSFKALREELD 259 (261)
T ss_pred CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 67899999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=289.76 Aligned_cols=242 Identities=14% Similarity=0.162 Sum_probs=197.3
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEc-----CCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK-----GSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k-----~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
...|.+.+.+| .|+++.||.+... .++..|++|.+.. ......+.+|+.++++++||||++++++
T Consensus 4 ~~~~~~~~~lg--------~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 75 (288)
T cd05093 4 RHNIVLKRELG--------EGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGV 75 (288)
T ss_pred hHHeeeccccC--------CcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 34689999999 8999999999853 3456799998876 2234568899999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhh---------hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTL---------KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIF 194 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~---------~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIl 194 (852)
+... ..+|+||||+. +|.+++.... .....+++..+..++.||+.||.||| +.+++||||||+||+
T Consensus 76 ~~~~--~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH-~~~i~H~dlkp~Nil 152 (288)
T cd05093 76 CVEG--DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA-SQHFVHRDLATRNCL 152 (288)
T ss_pred EecC--CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeecccCcceEE
Confidence 9987 89999999997 7988885321 12235899999999999999999999 899999999999999
Q ss_pred EccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc--
Q psy3914 195 INSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS-- 271 (852)
Q Consensus 195 V~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~-- 271 (852)
++.++.+||+|||++........ ........++..|+|||++.+..++.++|+|||||++|+|++ |..||.+...
T Consensus 153 i~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~ 230 (288)
T cd05093 153 VGENLLVKIGDFGMSRDVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE 230 (288)
T ss_pred EccCCcEEeccCCccccccCCce--eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 99999999999999874422111 111112334668999999987888999999999999999998 8888854321
Q ss_pred ----------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 ----------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 ----------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|..+.+++.+||+.||.+||++.+++..+
T Consensus 231 ~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l 276 (288)
T cd05093 231 VIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLL 276 (288)
T ss_pred HHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence 122346788999999999999999999999997753
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=290.60 Aligned_cols=235 Identities=22% Similarity=0.316 Sum_probs=187.3
Q ss_pred eEeccccCCCCCCcccCCceEEEEEEEc----CCCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 57 EVGEPAVSFSGCFTQKHTFWKFHGGKKK----GSNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 57 ~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k----~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
++.+.|| .|.||.||+|... ..+..|+||++.... ....+.+|++.+++++||||+++++++...
T Consensus 2 ~~~~~ig--------~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~ 73 (259)
T PF07714_consen 2 KLIKQIG--------EGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN 73 (259)
T ss_dssp EEEEEEE--------EESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS
T ss_pred EEeeEEc--------cCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccc
Confidence 4678899 9999999999998 446899999996522 357889999999999999999999999976
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
..+++||||+. +|.++|... ....++...+..++.||+.||.||| +.+++||||+++|||++.++.+||+|||
T Consensus 74 --~~~~lv~e~~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh-~~~iiH~~l~~~nill~~~~~~Kl~~f~ 148 (259)
T PF07714_consen 74 --EPLFLVMEYCPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLH-SNNIIHGNLSPSNILLDSNGQVKLSDFG 148 (259)
T ss_dssp --SSEEEEEE--TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHH-HTTEEEST-SGGGEEEETTTEEEEESTT
T ss_pred --cccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence 77999999998 799999543 2357899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccC
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSN 274 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~ 274 (852)
++........ ............|+|||.+....++.++||||||+++|||++ |..||.+... ...
T Consensus 149 ~~~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 226 (259)
T PF07714_consen 149 LSRPISEKSK--YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPI 226 (259)
T ss_dssp TGEETTTSSS--EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTS
T ss_pred cccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccee
Confidence 9875421111 111122334558999999966678999999999999999999 6788854311 223
Q ss_pred cCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 275 IDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 275 ~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
...+|..+.+++.+||+.+|.+||++.++++.
T Consensus 227 ~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~ 258 (259)
T PF07714_consen 227 PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQE 258 (259)
T ss_dssp BTTSBHHHHHHHHHHT-SSGGGS--HHHHHHH
T ss_pred ccchhHHHHHHHHHHcCCChhhCcCHHHHHhc
Confidence 56789999999999999999999999999875
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >KOG0193|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-33 Score=308.05 Aligned_cols=232 Identities=19% Similarity=0.268 Sum_probs=195.8
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
..++++|| +|+||+||+|.+.. .||||+++. ....+.+++|+..+++-||-||+-|.+++...
T Consensus 394 v~l~~rIG--------sGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p-- 460 (678)
T KOG0193|consen 394 VLLGERIG--------SGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP-- 460 (678)
T ss_pred hhccceec--------cccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC--
Confidence 56789999 99999999999953 699999988 45788999999999999999999999999876
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
. +.|||-+|+ +|+.+|+.. +..++....+.|+.||++|+.||| .++|||+|||..|||+.+++.|||+|||++
T Consensus 461 ~-~AIiTqwCeGsSLY~hlHv~---etkfdm~~~idIAqQiaqGM~YLH-AK~IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 461 P-LAIITQWCEGSSLYTHLHVQ---ETKFDMNTTIDIAQQIAQGMDYLH-AKNIIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred c-eeeeehhccCchhhhhccch---hhhhhHHHHHHHHHHHHHhhhhhh-hhhhhhhhccccceEEccCCcEEEecccce
Confidence 4 499999999 799999532 257888899999999999999999 999999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccc---cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc---------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENS---LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------- 271 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~---~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------- 271 (852)
+.-..... ...+....|...|||||++ ....|++.+|||+|||++|||++|.+||..+..
T Consensus 536 tvk~~w~g--~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd 613 (678)
T KOG0193|consen 536 TVKTRWSG--EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPD 613 (678)
T ss_pred eeeeeecc--ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCcc
Confidence 74322211 1112233466799999998 456789999999999999999999999963211
Q ss_pred -ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.....+.|+++++++..||..+++.||.+.+++..+
T Consensus 614 ~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l 650 (678)
T KOG0193|consen 614 LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKL 650 (678)
T ss_pred chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHH
Confidence 123467899999999999999999999999999853
|
|
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.7e-31 Score=278.53 Aligned_cols=240 Identities=17% Similarity=0.247 Sum_probs=203.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC----chHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD----TYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~----~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|.+.+.|| .|++|.||.|..+.++..|+||++.... ..+.+.+|+..+++++||||+++++.+....
T Consensus 1 ~~~~~~~i~--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 72 (260)
T cd06606 1 EWTRGELLG--------RGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE 72 (260)
T ss_pred CceeeeEee--------ecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC
Confidence 478889999 8999999999999999999999998733 4678899999999999999999999988643
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
+..+|+|+||+. +|.+++.+. ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.+|.++|+|||+
T Consensus 73 ~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh-~~~~~h~dl~p~ni~i~~~~~~~l~d~~~ 147 (260)
T cd06606 73 KNTLNIFLEYVSGGSLSSLLKKF----GKLPEPVIRKYTRQILEGLAYLH-SNGIVHRDIKGANILVDSDGVVKLADFGC 147 (260)
T ss_pred CCeEEEEEEecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCHHHEEEcCCCCEEEccccc
Confidence 368999999996 788888432 37899999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc--------------cccC
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK--------------SLSN 274 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~--------------~l~~ 274 (852)
+......... .......++..|+|||.+....++.++|+|||||++|+|++|..||.... ....
T Consensus 148 ~~~~~~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 225 (260)
T cd06606 148 AKRLGDIETG--EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEI 225 (260)
T ss_pred EEeccccccc--ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCC
Confidence 8754332110 01223456779999999977778899999999999999999999985542 1122
Q ss_pred cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 275 IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 275 ~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
...++..+.+++.+|+..+|.+||++.+++.| +||
T Consensus 226 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~-----~~~ 260 (260)
T cd06606 226 PEHLSEEAKDFLRKCLRRDPKKRPTADELLQH-----PFL 260 (260)
T ss_pred CcccCHHHHHHHHHhCcCChhhCCCHHHHhhC-----CCC
Confidence 34668899999999999999999999999997 776
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >KOG0574|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.7e-34 Score=294.07 Aligned_cols=238 Identities=13% Similarity=0.202 Sum_probs=211.2
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEE
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVY 135 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~y 135 (852)
|.|.+++| .|+||.||+|.++.+|+.|+||.+..+..++.+..|+.++++++.|+|++||+.+... ..++
T Consensus 35 FDi~~KLG--------EGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~--sDLW 104 (502)
T KOG0574|consen 35 FDIVGKLG--------EGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKH--SDLW 104 (502)
T ss_pred HHHHHHhc--------CCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccC--CceE
Confidence 67788999 9999999999999999999999999988999999999999999999999999999876 8899
Q ss_pred EEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccc
Q psy3914 136 LAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKIS 213 (852)
Q Consensus 136 IVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~ 213 (852)
||||||. +..+.++- .+..+++.+|..++..-++||.||| ...-||||||..||+++.+|..||+|||.+..+.
T Consensus 105 IVMEYCGAGSiSDI~R~---R~K~L~E~EIs~iL~~TLKGL~YLH-~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLT 180 (502)
T KOG0574|consen 105 IVMEYCGAGSISDIMRA---RRKPLSEQEISAVLRDTLKGLQYLH-DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLT 180 (502)
T ss_pred eehhhcCCCcHHHHHHH---hcCCccHHHHHHHHHHHHhHHHHHH-HHHHHHhhcccccEEEcccchhhhhhccccchhh
Confidence 9999999 78898843 3478999999999999999999999 8889999999999999999999999999987654
Q ss_pred cccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC--------------cCCCC
Q psy3914 214 EASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN--------------IDNIP 279 (852)
Q Consensus 214 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~--------------~~~ip 279 (852)
+. ........||+.|||||++..-.|.+.+||||||+...||..|++||..-..++. +..-+
T Consensus 181 DT----MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS 256 (502)
T KOG0574|consen 181 DT----MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWS 256 (502)
T ss_pred hh----HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhh
Confidence 42 2223467899999999999888899999999999999999999999965433332 23345
Q ss_pred hhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 280 ENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 280 ~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.++.++++.||-.+|+.|-++.++++| +|.+|
T Consensus 257 ~~F~DFi~~CLiK~PE~R~TA~~L~~H-----~Fikn 288 (502)
T KOG0574|consen 257 SEFNDFIRSCLIKKPEERKTALRLCEH-----TFIKN 288 (502)
T ss_pred hHHHHHHHHHhcCCHHHHHHHHHHhhh-----hhhcC
Confidence 678899999999999999999999998 78876
|
|
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=292.12 Aligned_cols=238 Identities=16% Similarity=0.215 Sum_probs=201.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.+|++.+.+| .|+++.||+|....++..|++|.+.. ....+.+.+|+.+++.++||||+++++.+...
T Consensus 19 ~~~~~~~~lg--------~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~-- 88 (293)
T cd06647 19 KKYTRFEKIG--------QGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVG-- 88 (293)
T ss_pred hhceeeeEec--------CCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeC--
Confidence 4699999999 89999999999998999999999875 33456788999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
...|+|+||+. +|.+++.+ ..++...+..++.||+.||.||| +.+++|+||+|+||+++.++.+||+|||++
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH-~~gi~H~dL~p~Nili~~~~~~kL~dfg~~ 162 (293)
T cd06647 89 DELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLH-SNQVIHRDIKSDNILLGMDGSVKLTDFGFC 162 (293)
T ss_pred CcEEEEEecCCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHH-hCCEeeccCCHHHEEEcCCCCEEEccCcce
Confidence 88999999998 78888742 35788899999999999999999 999999999999999999999999999987
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc--------------Cc
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--------------NI 275 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--------------~~ 275 (852)
....... .......+++.|++||.+....++.++|+|||||++|++++|..||.+..... ..
T Consensus 163 ~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (293)
T cd06647 163 AQITPEQ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP 238 (293)
T ss_pred ecccccc----cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCc
Confidence 6433211 11223457778999999876778889999999999999999999996432211 12
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
..++..+.+++++||..+|..||++.+++.| +||.+
T Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h-----~~~~~ 274 (293)
T cd06647 239 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH-----PFLKI 274 (293)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcC-----HHHhc
Confidence 3467789999999999999999999999997 77754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-31 Score=284.32 Aligned_cols=237 Identities=16% Similarity=0.205 Sum_probs=194.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
.+|++.++|| .|+++.||.|++..+ ..|+||++.. ......+.+|++++++++||||+++++.+.. .
T Consensus 6 ~~~~~~~~lg--------~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~ 73 (262)
T cd05071 6 ESLRLEVKLG--------QGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---E 73 (262)
T ss_pred HHeeEeeecC--------CCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC---C
Confidence 4599999999 899999999988755 4699999986 3345678999999999999999999998754 4
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
..|+||||+. +|.+++.+. ....++...+..++.|++.||.||| +.+++||||+|+||+++.++.+||+|||++.
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH-~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~ 150 (262)
T cd05071 74 PIYIVTEYMSKGSLLDFLKGE--MGKYLRLPQLVDMAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLAR 150 (262)
T ss_pred CcEEEEEcCCCCcHHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHH-HCCccccccCcccEEEcCCCcEEeccCCcee
Confidence 6899999998 788888432 2245788899999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDN 277 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~ 277 (852)
.+..... .......++..|+|||+..+..++.++|+|||||++|+|++ |..||.+... ......
T Consensus 151 ~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 227 (262)
T cd05071 151 LIEDNEY---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 227 (262)
T ss_pred ecccccc---ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccc
Confidence 5432211 11112334568999999877778999999999999999999 7888854321 112346
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
+|..+.+++.+|++.+|.+||++.++++.+.
T Consensus 228 ~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~ 258 (262)
T cd05071 228 CPESLHDLMCQCWRKEPEERPTFEYLQAFLE 258 (262)
T ss_pred cCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 7899999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=291.32 Aligned_cols=241 Identities=17% Similarity=0.215 Sum_probs=197.4
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
..|++.+.+| .|+++.||+|+++.+|+.|+||+++. ......+.+|+++++.++||||+++++++.+.
T Consensus 7 ~~~~~~~~lg--------~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~ 78 (302)
T cd07864 7 DKFDIIGQIG--------EGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDK 78 (302)
T ss_pred hhhheeeeec--------ccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCc
Confidence 4599999999 89999999999999999999999976 23345678899999999999999999998764
Q ss_pred C--------CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc
Q psy3914 130 S--------KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE 200 (852)
Q Consensus 130 ~--------~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~ 200 (852)
. ...+|+|+||+. +|..++.. ....+++..+..++.||+.||.||| +.+++||||+|+||+++.++.
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH-~~~i~H~dl~p~nili~~~~~ 154 (302)
T cd07864 79 QDALDFKKDKGAFYLVFEYMDHDLMGLLES---GLVHFSEDHIKSFMKQLLEGLNYCH-KKNFLHRDIKCSNILLNNKGQ 154 (302)
T ss_pred chhhhccccCCcEEEEEcccCccHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEECCCCc
Confidence 1 137999999999 66666632 2346899999999999999999999 899999999999999999999
Q ss_pred EEEcccchhhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-------
Q psy3914 201 WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------- 272 (852)
Q Consensus 201 ~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------- 272 (852)
+||+|||++.........+. ....++..|+|||++. ...++.++|+|||||++|+|++|..||......
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~---~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~ 231 (302)
T cd07864 155 IKLADFGLARLYNSEESRPY---TNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELIS 231 (302)
T ss_pred EEeCcccccccccCCccccc---ccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 99999999875433221111 1223466899999874 445678999999999999999999888532110
Q ss_pred ----------------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 ----------------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 ----------------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.....+|..+.+++.+||..+|.+||++.+++.| +||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~-----~~~ 302 (302)
T cd07864 232 RLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS-----PWL 302 (302)
T ss_pred HHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC-----CCC
Confidence 0123578999999999999999999999999997 776
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.7e-31 Score=282.63 Aligned_cols=237 Identities=14% Similarity=0.210 Sum_probs=196.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
..|++.++|| .|+++.||.|... ++..|++|.+.. ....+.+.+|+.+++.++||||+++++.+... .
T Consensus 6 ~~~~~~~~lg--------~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~ 74 (261)
T cd05072 6 ESIKLVKKLG--------AGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE--E 74 (261)
T ss_pred HHeEEeeecC--------CcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--C
Confidence 4599999999 8999999999875 567899998876 33456788999999999999999999999877 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
..|+||||+. +|.+++... ....++...+..++.||+.||.||| +.+++||||+|+||+++.++.+||+|||++.
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~LH-~~~i~H~dl~p~nili~~~~~~~l~dfg~~~ 151 (261)
T cd05072 75 PIYIITEYMAKGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIE-RKNYIHRDLRAANVLVSESLMCKIADFGLAR 151 (261)
T ss_pred CcEEEEecCCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccccchhhEEecCCCcEEECCCccce
Confidence 8999999997 798888432 2356788889999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDN 277 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~ 277 (852)
...+.... ......++..|+|||++....++.++|+|||||++|+|++ |..||.+... ......
T Consensus 152 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 228 (261)
T cd05072 152 VIEDNEYT---AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMEN 228 (261)
T ss_pred ecCCCcee---ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence 54332111 1112234567999999877778889999999999999998 8999853211 122356
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+|..+.+++.+||+.+|++||+++++++.+
T Consensus 229 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l 258 (261)
T cd05072 229 CPDELYDIMKTCWKEKAEERPTFDYLQSVL 258 (261)
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence 789999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.8e-32 Score=302.18 Aligned_cols=237 Identities=15% Similarity=0.197 Sum_probs=195.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|+++.||.|+++.+|..|+||++.. ......+.+|+.++++++||||+++++++...
T Consensus 16 ~~y~~~~~lg--------~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 87 (353)
T cd07850 16 KRYQNLKPIG--------SGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQ 87 (353)
T ss_pred cceEEEEEec--------cCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccC
Confidence 4599999999 89999999999999999999999875 22334677899999999999999999988653
Q ss_pred C----CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 130 S----KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 130 ~----~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
. ....|+||||+. +|.+.+. ..+++..+..++.||+.||.||| ..|++||||||+||+++.+|.+||+
T Consensus 88 ~~~~~~~~~~lv~e~~~~~l~~~~~------~~l~~~~~~~~~~ql~~aL~~LH-~~gi~H~dlkp~Nil~~~~~~~kL~ 160 (353)
T cd07850 88 KSLEEFQDVYLVMELMDANLCQVIQ------MDLDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSDCTLKIL 160 (353)
T ss_pred CCccccCcEEEEEeccCCCHHHHHh------hcCCHHHHHHHHHHHHHHHHHHH-hCCeeeCCCCHHHEEECCCCCEEEc
Confidence 1 135799999998 6777763 23788899999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-----------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS----------- 273 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~----------- 273 (852)
|||++....... ......++..|+|||++.+..++.++|+|||||++|+|++|..||.+.+...
T Consensus 161 Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 235 (353)
T cd07850 161 DFGLARTAGTSF-----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGT 235 (353)
T ss_pred cCccceeCCCCC-----CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCC
Confidence 999987543211 1123356779999999988888999999999999999999998885332100
Q ss_pred -----------------------------C--------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCC
Q psy3914 274 -----------------------------N--------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKP 310 (852)
Q Consensus 274 -----------------------------~--------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~ 310 (852)
. ....++.+.+++.+||..||++||++.++|.|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~---- 311 (353)
T cd07850 236 PSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH---- 311 (353)
T ss_pred CCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC----
Confidence 0 01245678999999999999999999999997
Q ss_pred CCCCc
Q psy3914 311 GGYFK 315 (852)
Q Consensus 311 ~~fF~ 315 (852)
+||+
T Consensus 312 -~~~~ 315 (353)
T cd07850 312 -PYIN 315 (353)
T ss_pred -hhHh
Confidence 6664
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.6e-31 Score=279.01 Aligned_cols=240 Identities=22% Similarity=0.301 Sum_probs=205.3
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|.+.+.|| .|+++.||.+.+..++..|++|++... .....+.+|++.++.++|||++++++.+...
T Consensus 1 ~y~~~~~l~--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~- 71 (258)
T cd08215 1 KYEIIKQIG--------KGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK- 71 (258)
T ss_pred CceEEeeec--------cCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-
Confidence 488999999 899999999999989999999999872 3456788999999999999999999999987
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
...|+|+|++. +|.+++.........++...+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+|||+
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh-~~~~~H~dl~~~nil~~~~~~~~l~d~~~ 149 (258)
T cd08215 72 -GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH-SRKILHRDIKPQNIFLTSNGLVKLGDFGI 149 (258)
T ss_pred -CEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH-hCCEecccCChHHeEEcCCCcEEECCccc
Confidence 89999999998 799888654333477899999999999999999999 88999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------cCcC
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------SNID 276 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------~~~~ 276 (852)
+....... .......+++.|+|||......++.++|+|+||+++|+|++|..||...... ....
T Consensus 150 ~~~~~~~~----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 225 (258)
T cd08215 150 SKVLSSTV----DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPS 225 (258)
T ss_pred eeecccCc----ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCC
Confidence 87543321 1122345778999999987777888999999999999999999998543211 1123
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.++..+.+++.+||+.+|.+||++.++++| +||
T Consensus 226 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~-----~~~ 258 (258)
T cd08215 226 QYSSELRNLVSSLLQKDPEERPSIAQILQS-----PFI 258 (258)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHhcC-----CCC
Confidence 677899999999999999999999999997 776
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.3e-31 Score=281.63 Aligned_cols=238 Identities=20% Similarity=0.289 Sum_probs=200.3
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.+| .|+++.||+|..+.+|..|++|.+... .....+.+|+.+++.++||||+++++.++..
T Consensus 1 ~~~~~~~l~--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~- 71 (257)
T cd08225 1 RYEIIKKIG--------EGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQEN- 71 (257)
T ss_pred CceEEEEec--------CCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccC-
Confidence 488999999 899999999999999999999999762 3456788999999999999999999999987
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc-EEEcccc
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE-WKLGGLE 207 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~-~KL~DFg 207 (852)
..+|+|+||+. +|.+++... ....+++..+..++.||+.||.||| +.+++|+||+|+||+++.++. +||+|||
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh-~~~i~H~dl~~~nil~~~~~~~~~l~d~~ 147 (257)
T cd08225 72 -GRLFIVMEYCDGGDLMKRINRQ--RGVLFSEDQILSWFVQISLGLKHIH-DRKILHRDIKSQNIFLSKNGMVAKLGDFG 147 (257)
T ss_pred -CeEEEEEecCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccccCCHHHEEEcCCCCeEEecccc
Confidence 89999999997 788888432 2235789999999999999999999 899999999999999998865 6999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------cCc
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------SNI 275 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------~~~ 275 (852)
.+........ ......+++.|+|||+..+..++.++|+|||||++|+|++|..||...... ...
T Consensus 148 ~~~~~~~~~~----~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 223 (257)
T cd08225 148 IARQLNDSME----LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPIS 223 (257)
T ss_pred cchhccCCcc----cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCC
Confidence 9875533211 112235777899999987777889999999999999999999998543211 122
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
..++..+.+++.+|+..+|.+||++.+++.| +||
T Consensus 224 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~-----~~~ 257 (257)
T cd08225 224 PNFSRDLRSLISQLFKVSPRDRPSITSILKR-----PFL 257 (257)
T ss_pred CCCCHHHHHHHHHHhccChhhCcCHHHHhhC-----CCC
Confidence 4567899999999999999999999999997 776
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-31 Score=286.44 Aligned_cols=241 Identities=15% Similarity=0.173 Sum_probs=193.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcC-----CCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-----SNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-----~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
.+|++.+.|| .|+++.||.|..+. ++..|+||++.... ....+.+|+.+++.++||||++++++
T Consensus 6 ~~~~~~~~ig--------~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~ 77 (277)
T cd05062 6 EKITMSRELG--------QGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGV 77 (277)
T ss_pred HHceeeeeec--------cccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEE
Confidence 4599999999 89999999998642 35789999986522 23457789999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhc------CCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKE------NNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS 197 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~------~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~ 197 (852)
+... ...|+||||+. +|.+++.+.... ...++...+..++.|++.||.||| +.+++||||||+||+++.
T Consensus 78 ~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH-~~~~vH~dlkp~Nil~~~ 154 (277)
T cd05062 78 VSQG--QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN-ANKFVHRDLAARNCMVAE 154 (277)
T ss_pred EcCC--CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCcchheEEEcC
Confidence 9877 88999999998 799988542211 123567788899999999999999 899999999999999999
Q ss_pred CCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-----
Q psy3914 198 CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS----- 271 (852)
Q Consensus 198 ~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~----- 271 (852)
++.+||+|||++........ ........++..|+|||++.+..++.++|+|||||++|||++ |..||.+...
T Consensus 155 ~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~ 232 (277)
T cd05062 155 DFTVKIGDFGMTRDIYETDY--YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLR 232 (277)
T ss_pred CCCEEECCCCCccccCCcce--eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 99999999999864322111 011112234568999999977778999999999999999999 6888854321
Q ss_pred -------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|..+.+++.+||+.+|..||++.++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l 275 (277)
T cd05062 233 FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 275 (277)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHh
Confidence 122456788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=289.24 Aligned_cols=241 Identities=19% Similarity=0.222 Sum_probs=195.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCC-----CeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS-----NEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~-----g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
.|.+.+.|| .|+++.||+|+...+ +..|+||++.... ....+.+|+.+++.++||||+++++.+
T Consensus 6 ~~~~~~~lg--------~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~ 77 (283)
T cd05091 6 TVRFMEELG--------EDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVV 77 (283)
T ss_pred HHHHHHHhC--------CCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEE
Confidence 378889999 899999999987543 5789999998632 235678899999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhh------------hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCC
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTL------------KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTS 192 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~------------~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~N 192 (852)
.+. ...++++||+. +|.+++.... .....++...+..++.|++.||.||| +.+++||||||+|
T Consensus 78 ~~~--~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH-~~gi~H~dlkp~N 154 (283)
T cd05091 78 TKE--QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS-SHHVVHKDLATRN 154 (283)
T ss_pred cCC--CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH-HcCccccccchhh
Confidence 987 88999999997 6888874211 11235788889999999999999999 8999999999999
Q ss_pred EEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc
Q psy3914 193 IFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS 271 (852)
Q Consensus 193 IlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~ 271 (852)
|+++.++.+||+|||+++....... ........+++.|+|||++.+..++.++|+|||||++|||++ |..||.+...
T Consensus 155 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 232 (283)
T cd05091 155 VLVFDKLNVKISDLGLFREVYAADY--YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 232 (283)
T ss_pred eEecCCCceEecccccccccccchh--eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 9999999999999999875432111 111122334668999999877778899999999999999998 7788754322
Q ss_pred c------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 272 L------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 272 l------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
. .....+|..+.+++.+||+.+|..||++.+++..++
T Consensus 233 ~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 233 QDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 1 123568889999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=292.33 Aligned_cols=236 Identities=15% Similarity=0.226 Sum_probs=199.8
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
|+....|| .|+++.||.|.+..+++.|+||+++. ......+.+|+.+++.++||||+++++.+... ..
T Consensus 23 ~~~~~~ig--------~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~--~~ 92 (297)
T cd06659 23 LENYIKIG--------EGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVG--EE 92 (297)
T ss_pred HHhhhhcC--------CCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeC--Ce
Confidence 55666888 89999999999999999999999876 33456788999999999999999999999987 89
Q ss_pred EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 134 VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 134 ~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
.|+|+||+. +|..++.. ..+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.+||+|||++..
T Consensus 93 ~~iv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH-~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~ 166 (297)
T cd06659 93 LWVLMEFLQGGALTDIVSQ-----TRLNEEQIATVCESVLQALCYLH-SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQ 166 (297)
T ss_pred EEEEEecCCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHeEEccCCcEEEeechhHhh
Confidence 999999998 68776632 46889999999999999999999 89999999999999999999999999999864
Q ss_pred cccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------ccCcCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------LSNIDN 277 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------l~~~~~ 277 (852)
+.... .......++..|+|||++.+..++.++|+|||||++|+|++|..||..... ......
T Consensus 167 ~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (297)
T cd06659 167 ISKDV----PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHK 242 (297)
T ss_pred ccccc----ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCC
Confidence 43211 112235577899999999777788999999999999999999999854321 122346
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
++..+.+++.+||..+|.+||++.++++| +||.+
T Consensus 243 ~~~~l~~~i~~~l~~~P~~Rps~~~ll~~-----~~~~~ 276 (297)
T cd06659 243 ISPVLRDFLERMLTREPQERATAQELLDH-----PFLLQ 276 (297)
T ss_pred CCHHHHHHHHHHhcCCcccCcCHHHHhhC-----hhhcc
Confidence 78899999999999999999999999997 67654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-31 Score=281.48 Aligned_cols=234 Identities=17% Similarity=0.242 Sum_probs=193.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
.|++.+.|| .|+++.||.|..+ ++..+++|.+.. ......+.+|+.+|+.++||||++++++++.. ..
T Consensus 5 ~~~~~~~lg--------~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 73 (256)
T cd05114 5 ELTFMKELG--------SGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQ--KP 73 (256)
T ss_pred HcEEeeEec--------CCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccC--CC
Confidence 488899999 8999999999886 456899998876 33356788999999999999999999999887 88
Q ss_pred EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 134 VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 134 ~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
+|+||||+. +|.+++... .+.+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.+||+|||++..
T Consensus 74 ~~iv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~ 149 (256)
T cd05114 74 LYIVTEFMENGCLLNYLRQR---QGKLSKDMLLSMCQDVCEGMEYLE-RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRY 149 (256)
T ss_pred EEEEEEcCCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHH-HCCccccccCcceEEEcCCCeEEECCCCCccc
Confidence 999999997 688887422 246889999999999999999999 89999999999999999999999999999874
Q ss_pred cccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCccc------------cCcCCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKSL------------SNIDNI 278 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~l------------~~~~~i 278 (852)
...... .......++..|+|||++.+..++.++|+|||||++|+|++ |..||.+.... ......
T Consensus 150 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~ 226 (256)
T cd05114 150 VLDDEY---TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLA 226 (256)
T ss_pred cCCCce---eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
Confidence 322111 11112234457999999977778899999999999999999 88998543221 123446
Q ss_pred ChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 279 PENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 279 p~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
+..+.+++.+||..+|.+||++.++++.
T Consensus 227 ~~~~~~li~~c~~~~p~~Rps~~~l~~~ 254 (256)
T cd05114 227 SMTVYEVMYSCWHEKPEGRPTFAELLRA 254 (256)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 7789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=313.92 Aligned_cols=520 Identities=18% Similarity=0.225 Sum_probs=352.0
Q ss_pred cccccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHH---HHHHHHHhCCC
Q psy3914 43 WAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPAL---SYVKKLKTLRH 116 (852)
Q Consensus 43 ~~~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~---~E~~~Lk~LrH 116 (852)
..+|+..+. .|...+.+| .+.|-++.+|++++ |. |.||+|-+. -....+. .+++ ...++|
T Consensus 15 e~yfsd~~~---e~~~~~~LG--------stRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~ 80 (1431)
T KOG1240|consen 15 EVYFSDLSV---ECHYVENLG--------STRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKA 80 (1431)
T ss_pred HHHhhcCcc---ceeeecccC--------chhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcC
Confidence 345555433 577789999 88999999998863 43 889998761 1222333 3344 556689
Q ss_pred CCcceEeeeEEcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE
Q psy3914 117 PSILTFLDSVESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI 195 (852)
Q Consensus 117 PnIlk~~d~~e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV 195 (852)
||++.|.-+.+++ ...|+|-+|+. +|++.| ....-+...+.+|+++||+.||+-+| ..||+|||||.+||+|
T Consensus 81 pn~lPfqk~~~t~--kAAylvRqyvkhnLyDRl----STRPFL~~iEKkWiaFQLL~al~qcH-~~gVcHGDIKsENILi 153 (1431)
T KOG1240|consen 81 PNCLPFQKVLVTD--KAAYLVRQYVKHNLYDRL----STRPFLVLIEKKWIAFQLLKALSQCH-KLGVCHGDIKSENILI 153 (1431)
T ss_pred CcccchHHHHHhh--HHHHHHHHHHhhhhhhhh----ccchHHHHHHHHHHHHHHHHHHHHHH-HcCccccccccceEEE
Confidence 9999999999887 88999999999 788777 34466888999999999999999999 9999999999999999
Q ss_pred ccCCcEEEcccchhhc--cccc-cCCCCcccccccCCCcccCCccccCC----------C-CCcchhHHhHHHHHHHHHh
Q psy3914 196 NSCGEWKLGGLEYMEK--ISEA-SCIPMKRYSRYEDQSTYQIPENSLSH----------V-TKCSTDMYGLGILIWEVFN 261 (852)
Q Consensus 196 ~~~g~~KL~DFg~a~~--~~~~-~~~~~~~~~~~~gt~~Y~APE~~~~~----------~-~~~~sDIwSLG~ll~el~t 261 (852)
+.-.-+.|.||..-+. +.++ ...-...+.+...-.+|.|||.+... . .+++.||||+||++.|||+
T Consensus 154 TSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~ 233 (1431)
T KOG1240|consen 154 TSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFL 233 (1431)
T ss_pred eeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHh
Confidence 9998889999987542 1111 11111112222223489999996221 1 5678999999999999998
Q ss_pred -CCCCCC---------C-Cccc-cCcCCCC-hhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHHHHH-HHHHH
Q psy3914 262 -GPLQST---------N-RKSL-SNIDNIP-ENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDAL-LFLEE 327 (852)
Q Consensus 262 -G~~pf~---------~-~~~l-~~~~~ip-~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv~~l-~~Lee 327 (852)
|.++|. + .... ..+.+|+ ..+++++..|++.+|.+|.+++++|+.-+ +-+|-+-|-..+ .++..
T Consensus 234 Eg~PlF~LSQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yr--G~~FP~yFy~FL~~Y~~~ 311 (1431)
T KOG1240|consen 234 EGRPLFTLSQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYR--GLVFPEYFYSFLYDYLDR 311 (1431)
T ss_pred cCCCcccHHHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhh--ccccHHHHHHHHHHHHHh
Confidence 688883 1 1111 1234453 36999999999999999999999998633 345544333322 22222
Q ss_pred hhcc-----------------------------------------------------CHHHHhHHHH-------hhhhhh
Q psy3914 328 IQMK-----------------------------------------------------DKIDKNKFFN-------GLASAI 347 (852)
Q Consensus 328 l~~k-----------------------------------------------------~~~eK~~Ff~-------~L~~~l 347 (852)
+.-. +..++..-++ .+...+
T Consensus 312 ~~~~~~~~p~~~~~~~gs~i~d~~~~~~~p~n~~~~~~~~~~h~ln~~~~~~~~~~~S~De~~~~~~~al~~~r~~~~~l 391 (1431)
T KOG1240|consen 312 FVPLTTSTPISDNTCTGSTIEDNVKLLDGPTNKIYRDFSQICHCLNFPLIKDGGTITSSDEIIDSISKALEFSRHLIENL 391 (1431)
T ss_pred cCCccccCccccccccCcccccccccccCcccchhhhhhccccccccccccccccccCCcHHHHHHHHHHhhhhhhcccc
Confidence 2111 1111111111 010000
Q ss_pred ---ccC-----------------CcccccccchhhhHhhhhc---CCCcccchhhhhhhcccCChhhhhcchhhhhhhcc
Q psy3914 348 ---DKF-----------------PKLISCHKVLPQLINAFEY---GEAGASVLSPLFKIGQMLEHEDYQAKIVPCVVKLF 404 (852)
Q Consensus 348 ---~~f-----------------P~~~~~~kiLP~Ll~~~e~---~~~~~~vL~~llki~~~l~~~ef~~~i~P~i~~LF 404 (852)
+.| |..-+.--+++.|...+.. ...--..|..+..++..++.+.--..|+|.++-|+
T Consensus 392 ~~~~dl~~~~q~~~~~~~~~~~~~~~~ga~l~vs~lts~IR~lk~~~tK~~ALeLl~~lS~~i~de~~LDRVlPY~v~l~ 471 (1431)
T KOG1240|consen 392 DVIQDLKPEKQLWTARSSPNIKDPKEEGAVLFVSVLTSCIRALKTIQTKLAALELLQELSTYIDDEVKLDRVLPYFVHLL 471 (1431)
T ss_pred hhhhccchHHhcccccCCcccCCccccceeeeHHHHHHHHHhhhcchhHHHHHHHHHHHhhhcchHHHHhhhHHHHHHHh
Confidence 011 1122222334444333322 22223344555667777888888888899999998
Q ss_pred ccCCHHHHHHHHHHHHHHHcc------CChHHHhHhHHHHHHhhcCCC-c------------------------------
Q psy3914 405 GSNDRATRSRLLLQLEHFIGH------VPDAIVNEQIFQQVALGFLDT-N------------------------------ 447 (852)
Q Consensus 405 ~~~dr~iR~~LL~~L~~~~~~------l~~~~v~~~I~P~l~~g~~D~-~------------------------------ 447 (852)
..++..+|...|+-|-.++.. .+...+-++|||+|.....|+ +
T Consensus 472 ~Ds~a~Vra~Al~Tlt~~L~~Vr~~~~~daniF~eYlfP~L~~l~~d~~~~~vRiayAsnla~LA~tA~rFle~~q~~~~ 551 (1431)
T KOG1240|consen 472 MDSEADVRATALETLTELLALVRDIPPSDANIFPEYLFPHLNHLLNDSSAQIVRIAYASNLAQLAKTAYRFLELTQELRQ 551 (1431)
T ss_pred cCchHHHHHHHHHHHHHHHhhccCCCcccchhhHhhhhhhhHhhhccCccceehhhHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 888888887666655544332 345667777888777777762 2
Q ss_pred ----------------------------------------HHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCC
Q psy3914 448 ----------------------------------------PTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQ 487 (852)
Q Consensus 448 ----------------------------------------~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~ 487 (852)
+.||.+-+.+|..||--+....-|.-||+||.... +|++
T Consensus 552 ~g~~n~~nset~~~~~~~~~~~~L~~~V~~~v~sLlsd~~~~Vkr~Lle~i~~LC~FFGk~ksND~iLshLiTfL-NDkD 630 (1431)
T KOG1240|consen 552 AGMLNDPNSETAPEQNYNTELQALHHTVEQMVSSLLSDSPPIVKRALLESIIPLCVFFGKEKSNDVILSHLITFL-NDKD 630 (1431)
T ss_pred cccccCcccccccccccchHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHh-cCcc
Confidence 23333334445555555555444555677776655 7999
Q ss_pred cceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCH-HHHHHhHhhhhhhcccCCCh
Q psy3914 488 GGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLL-SEVAQRILPALCQLSTDPEK 566 (852)
Q Consensus 488 ~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~-~~~a~~ILP~L~~l~~D~~~ 566 (852)
|..|..----|..++-+++..+..+.|+|.+.+.|-|++..+-+-||.++...++.--. +-....|+-.+.|++.-|+.
T Consensus 631 w~LR~aFfdsI~gvsi~VG~rs~seyllPLl~Q~ltD~EE~Viv~aL~~ls~Lik~~ll~K~~v~~i~~~v~PlL~hPN~ 710 (1431)
T KOG1240|consen 631 WRLRGAFFDSIVGVSIFVGWRSVSEYLLPLLQQGLTDGEEAVIVSALGSLSILIKLGLLRKPAVKDILQDVLPLLCHPNL 710 (1431)
T ss_pred HHHHHHHHhhccceEEEEeeeeHHHHHHHHHHHhccCcchhhHHHHHHHHHHHHHhcccchHHHHHHHHhhhhheeCchH
Confidence 99999888778888889998888999999999999999999999999999887776443 33456777777888889999
Q ss_pred hhHHHHHHHHHHHHHHHhhh
Q psy3914 567 SVRDSAFKTIKGFLGKLEQV 586 (852)
Q Consensus 567 ~Vr~~a~~~i~~~l~~le~~ 586 (852)
-||..+...|-.....+..+
T Consensus 711 WIR~~~~~iI~~~~~~ls~a 730 (1431)
T KOG1240|consen 711 WIRRAVLGIIAAIARQLSAA 730 (1431)
T ss_pred HHHHHHHHHHHHHHhhhhhh
Confidence 99998888776665555543
|
|
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.7e-31 Score=283.72 Aligned_cols=242 Identities=12% Similarity=0.167 Sum_probs=194.6
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCC---eEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN---EKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g---~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
|.+++.|| .|++|.||.|+...++ ..|+||.+... .....+.+|+..++.++||||+++++.+..
T Consensus 1 ~~~~~~lg--------~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 72 (273)
T cd05035 1 LKLGKILG--------EGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFE 72 (273)
T ss_pred CccccccC--------cCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeecc
Confidence 57888999 9999999999986544 78999998762 224568899999999999999999998765
Q ss_pred CCC----CeEEEEEeecc--cHHHHHHhhh--hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc
Q psy3914 129 PSK----SLVYLAVEYVE--PIFYHLDNTL--KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE 200 (852)
Q Consensus 129 ~~~----~~~yIVtE~v~--~L~~~L~~~~--~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~ 200 (852)
... ...++++||+. +|..++.... .....+++..+..++.||+.||.||| +.+++||||||+||++++++.
T Consensus 73 ~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH-~~~i~H~dlkp~Nil~~~~~~ 151 (273)
T cd05035 73 ASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS-NRNFIHRDLAARNCMLREDMT 151 (273)
T ss_pred CCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH-hCCeeccccchheEEECCCCe
Confidence 411 24899999998 7888874332 12246889999999999999999999 899999999999999999999
Q ss_pred EEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc--------
Q psy3914 201 WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS-------- 271 (852)
Q Consensus 201 ~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~-------- 271 (852)
+||+|||+++........ ........+..|+|||.+.+..++.++|+|||||++|||++ |..||.+...
T Consensus 152 ~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~ 229 (273)
T cd05035 152 VCVADFGLSKKIYSGDYY--RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLR 229 (273)
T ss_pred EEECCccceeeccccccc--cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 999999998754322111 01111223558999999977788899999999999999999 8888854321
Q ss_pred ----ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 272 ----LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 272 ----l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
......++..+.+++.+||+.||.+||++.++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~ 270 (273)
T cd05035 230 HGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLE 270 (273)
T ss_pred cCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 2234568889999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.7e-31 Score=282.30 Aligned_cols=234 Identities=15% Similarity=0.227 Sum_probs=193.7
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
.|++.+.+| .|+++.||.|..+ ++..++||++.. ......+.+|+.+++.++||||+++++++... ..
T Consensus 5 ~~~~~~~lg--------~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~ 73 (256)
T cd05059 5 ELTFLKELG--------SGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQ--RP 73 (256)
T ss_pred Hcchhhhhc--------cCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCC--Cc
Confidence 488999999 8999999999886 567899999876 33445678899999999999999999999877 88
Q ss_pred EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 134 VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 134 ~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
.|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++||||+|+|||++.+|.+||+|||+++.
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~ 149 (256)
T cd05059 74 IFIVTEYMANGCLLNYLRER---KGKLGTEWLLDMCSDVCEAMEYLE-SNGFIHRDLAARNCLVGEDNVVKVSDFGLARY 149 (256)
T ss_pred eEEEEecCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHH-HCCcccccccHhhEEECCCCcEEECCccccee
Confidence 999999997 688888432 246889999999999999999999 89999999999999999999999999999875
Q ss_pred cccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDNI 278 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~i 278 (852)
..+... .......++..|+|||.+.+..++.++|+|||||++|+|++ |..||.+... ......+
T Consensus 150 ~~~~~~---~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (256)
T cd05059 150 VLDDQY---TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLA 226 (256)
T ss_pred cccccc---cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCC
Confidence 432111 11111223347999999977788899999999999999998 7888854321 1223457
Q ss_pred ChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 279 PENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 279 p~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
|..+.+++.+||+.+|++||++.++++.
T Consensus 227 ~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 227 PTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 8999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.5e-31 Score=286.12 Aligned_cols=230 Identities=17% Similarity=0.222 Sum_probs=193.3
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PI 144 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L 144 (852)
.|++++||.|.++.+|+.|++|++.. ......+.+|+++|+.++||||+++++.++.. +.+|+||||+. +|
T Consensus 3 ~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv~e~~~~~~L 80 (277)
T cd05577 3 KGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETK--DDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecC--CeEEEEEecCCCCcH
Confidence 78999999999999999999999875 22344567899999999999999999999987 89999999998 78
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccc
Q psy3914 145 FYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYS 224 (852)
Q Consensus 145 ~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~ 224 (852)
.+++.+.. ...+++..+..++.||+.||.||| +.+++||||+|+||+++.++.+||+|||++...... ....
T Consensus 81 ~~~l~~~~--~~~~~~~~~~~~~~ql~~~l~~lH-~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-----~~~~ 152 (277)
T cd05577 81 KYHIYNVG--EPGFPEARAIFYAAQIICGLEHLH-QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-----KKIK 152 (277)
T ss_pred HHHHHHcC--cCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC-----Cccc
Confidence 88884322 236899999999999999999999 899999999999999999999999999998754321 1112
Q ss_pred cccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc---------------ccCcCCCChhHHHHHHHh
Q psy3914 225 RYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS---------------LSNIDNIPENLKRVYLEL 289 (852)
Q Consensus 225 ~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~---------------l~~~~~ip~~L~~li~~l 289 (852)
...++..|+|||++.+..++.++|+|||||++|+|++|..||.+... ......+++.+.+++.+|
T Consensus 153 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 232 (277)
T cd05577 153 GRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEAL 232 (277)
T ss_pred cccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHH
Confidence 34566789999998666688899999999999999999999954322 112346788999999999
Q ss_pred ccCCCCCCC-----CHHHHHHhhcCCCCCCcc
Q psy3914 290 ISERPNQRP-----NPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 290 L~~nP~~Rp-----s~~elL~~l~~~~~fF~n 316 (852)
|..+|.+|| ++.+++.| +||.+
T Consensus 233 l~~~p~~R~~~~~~~~~~ll~h-----~~~~~ 259 (277)
T cd05577 233 LQKDPEKRLGCRGGSADEVREH-----PLFKD 259 (277)
T ss_pred ccCChhHccCCCcccHHHHHhC-----hhhhc
Confidence 999999999 88889887 88854
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.6e-32 Score=316.44 Aligned_cols=257 Identities=14% Similarity=0.163 Sum_probs=194.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCC-eEEEEE------------------EEeC-CCchHHHHHHHHHHH
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN-EKVTIF------------------LNDS-ADTYEPALSYVKKLK 112 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g-~~VaVK------------------v~~~-~~~~~~~~~E~~~Lk 112 (852)
..+|++.+.|| .|+||+||.|..+... ..++++ .+.. ......+.+|+.+|+
T Consensus 147 ~~~Y~ii~~LG--------~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~ 218 (501)
T PHA03210 147 LAHFRVIDDLP--------AGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALG 218 (501)
T ss_pred hhccEEEeEec--------CCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHH
Confidence 34699999999 9999999998765432 221111 1111 223456789999999
Q ss_pred hCCCCCcceEeeeEEcCCCCeEEEEEeecc-cHHHHHHhh-hhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCC
Q psy3914 113 TLRHPSILTFLDSVESPSKSLVYLAVEYVE-PIFYHLDNT-LKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNH 190 (852)
Q Consensus 113 ~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~-~L~~~L~~~-~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp 190 (852)
+++||||++++++++.. ...|+|+|++. +|..++... ...........+..++.||+.||.||| +.+|+||||||
T Consensus 219 ~l~HpnIv~l~~~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH-~~gIiHrDLKP 295 (501)
T PHA03210 219 RLNHENILKIEEILRSE--ANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH-DKKLIHRDIKL 295 (501)
T ss_pred hCCCCCcCcEeEEEEEC--CeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH-hCCeecCCCCH
Confidence 99999999999999988 88999999998 677776321 111223445677889999999999999 89999999999
Q ss_pred CCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCC-CCCC
Q psy3914 191 TSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQ-STNR 269 (852)
Q Consensus 191 ~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~p-f~~~ 269 (852)
+|||++.+|.+||+|||++..+..... .......||..|+|||++.+..++.++|||||||++|||++|.++ +.+.
T Consensus 296 ~NILl~~~~~vkL~DFGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~ 372 (501)
T PHA03210 296 ENIFLNCDGKIVLGDFGTAMPFEKERE---AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDG 372 (501)
T ss_pred HHEEECCCCCEEEEeCCCceecCcccc---cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCC
Confidence 999999999999999999875532211 111235688999999999888899999999999999999998654 3211
Q ss_pred ccc------------c---------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHH
Q psy3914 270 KSL------------S---------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFI 304 (852)
Q Consensus 270 ~~l------------~---------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL 304 (852)
... . ....++..+.++|.+||..||++||++.+++
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL 452 (501)
T PHA03210 373 GGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELL 452 (501)
T ss_pred CCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHh
Confidence 000 0 0013566777889999999999999999999
Q ss_pred HhhcCCCCCCcchHHHHHHHHHHh
Q psy3914 305 MRNRKPGGYFKNDLIDALLFLEEI 328 (852)
Q Consensus 305 ~~l~~~~~fF~n~lv~~l~~Leel 328 (852)
.| +||.....+.+.++..+
T Consensus 453 ~h-----p~f~~~~~~~~~~~~~~ 471 (501)
T PHA03210 453 AL-----PLFSAEEEEEILFIHGL 471 (501)
T ss_pred hC-----hhhhcCCchHHHHHHhh
Confidence 97 99988766655555443
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-31 Score=288.46 Aligned_cols=233 Identities=16% Similarity=0.203 Sum_probs=197.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
.+|++.+.|| .|++++||+|....+|..|++|++.. ......+.+|+++++.++||||+++++.+...
T Consensus 5 ~~~~~~~~ig--------~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 75 (284)
T cd06620 5 EDLETISDLG--------AGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNE- 75 (284)
T ss_pred HHHHHHHHcC--------CCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecC-
Confidence 4689999999 99999999999999999999998876 22346788999999999999999999999987
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+|+||||+. +|..++.+ .+.++...+..++.|++.+|.|||+..+++||||+|+||+++.++.++|+|||+
T Consensus 76 -~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl 150 (284)
T cd06620 76 -NNICMCMEFMDCGSLDRIYKK----GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGV 150 (284)
T ss_pred -CEEEEEEecCCCCCHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCc
Confidence 89999999998 68777733 356899999999999999999999557999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------- 272 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------- 272 (852)
+....... .....++..|+|||++.+..++.++|+|||||++|++++|..||......
T Consensus 151 ~~~~~~~~------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 224 (284)
T cd06620 151 SGELINSI------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQ 224 (284)
T ss_pred ccchhhhc------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHH
Confidence 76432111 12345788999999987778888999999999999999999999543220
Q ss_pred ------cC--cCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 273 ------SN--IDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 273 ------~~--~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.. ...+|..+.+++.+||..||..||++.+++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 225 IVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred HhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00 12377889999999999999999999999997
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.8e-31 Score=278.80 Aligned_cols=236 Identities=18% Similarity=0.328 Sum_probs=202.9
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|+++.||.|+++.+++.|+||.+... .....+.+|++++++++||||+++++++.+.
T Consensus 1 ~y~~~~~l~--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~- 71 (254)
T cd06627 1 NYQLGDLIG--------RGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS- 71 (254)
T ss_pred CceeeeEEc--------ccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC-
Confidence 488999999 899999999999999999999999872 3556789999999999999999999999987
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
...|++||++. +|.+++... ..+++..+..++.|++.||.||| +.+++||||+|+||+++.+|.++|+|||+
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl~p~ni~i~~~~~~~l~d~~~ 145 (254)
T cd06627 72 -DSLYIILEYAENGSLRQIIKKF----GPFPESLVAVYVYQVLQGLAYLH-EQGVIHRDIKAANILTTKDGVVKLADFGV 145 (254)
T ss_pred -CEEEEEEecCCCCcHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHh-hCCcccCCCCHHHEEECCCCCEEEecccc
Confidence 89999999998 688887432 57899999999999999999999 99999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------cCcC
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------SNID 276 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------~~~~ 276 (852)
+........ ......++..|+|||...+..++.++|+|+||+++|+|++|..||...... ....
T Consensus 146 ~~~~~~~~~----~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 221 (254)
T cd06627 146 ATKLNDVSK----DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPE 221 (254)
T ss_pred ceecCCCcc----cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCC
Confidence 875543211 122345677999999986666888999999999999999999998543211 1235
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.++..+.+++.+||..+|++||++.+++.+ +||
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~-----~~~ 254 (254)
T cd06627 222 GISPELKDFLMQCFQKDPNLRPTAKQLLKH-----PWI 254 (254)
T ss_pred CCCHHHHHHHHHHHhCChhhCcCHHHHhcC-----CCC
Confidence 678899999999999999999999999986 776
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-31 Score=288.66 Aligned_cols=241 Identities=17% Similarity=0.285 Sum_probs=196.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCC-----CeEEEEEEEeCC---CchHHHHHHHHHHHhC-CCCCcceEee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS-----NEKVTIFLNDSA---DTYEPALSYVKKLKTL-RHPSILTFLD 124 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~-----g~~VaVKv~~~~---~~~~~~~~E~~~Lk~L-rHPnIlk~~d 124 (852)
.+|++.+.|| .|+++.||.|..+.. ...|++|.+... .....+.+|+.+++.+ +||||+++++
T Consensus 12 ~~~~~~~~ig--------~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 83 (293)
T cd05053 12 DRLTLGKPLG--------EGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLG 83 (293)
T ss_pred hHeEEeeEec--------ccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence 4699999999 899999999988644 378999988762 2234578899999999 7999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhh------------hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCC
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTL------------KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNH 190 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~------------~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp 190 (852)
++..+ ..+|++|||+. +|..++.... .....+++..+..++.||+.||.||| +.+++||||||
T Consensus 84 ~~~~~--~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH-~~~ivH~dlkp 160 (293)
T cd05053 84 VCTQE--GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA-SKKCIHRDLAA 160 (293)
T ss_pred EEcCC--CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH-HCCccccccce
Confidence 99887 88999999997 7998885321 23456889999999999999999999 89999999999
Q ss_pred CCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCC
Q psy3914 191 TSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNR 269 (852)
Q Consensus 191 ~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~ 269 (852)
+||+++.++.+||+|||+++.+..... ........++..|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 161 ~Nil~~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 238 (293)
T cd05053 161 RNVLVTEDHVMKIADFGLARDIHHIDY--YRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI 238 (293)
T ss_pred eeEEEcCCCeEEeCccccccccccccc--eeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCC
Confidence 999999999999999999875432111 011111223457999999877888899999999999999997 88888543
Q ss_pred cc------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 270 KS------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 270 ~~------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.. ......++..+.+++.+||..+|++|||+.++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l 288 (293)
T cd05053 239 PVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDL 288 (293)
T ss_pred CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence 21 123456788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.3e-31 Score=282.09 Aligned_cols=238 Identities=16% Similarity=0.217 Sum_probs=196.2
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCC---CeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS---NEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~---g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.|++.+.|| .|+++.||+|+.+.+ ...|+||++... .....+.+|+..++.++||||+++++.+..
T Consensus 5 ~~~~~~~lg--------~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 76 (266)
T cd05033 5 YVTIEKVIG--------GGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK 76 (266)
T ss_pred HceeeeEec--------CCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEec
Confidence 589999999 899999999998654 468999998762 233467789999999999999999999988
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. ...|+||||+. +|.+++.. ..+.++...+..++.|++.||.||| +.+++||||+|+||+++.++.+||+||
T Consensus 77 ~--~~~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~Lh-~~~i~H~di~p~nili~~~~~~~l~df 150 (266)
T cd05033 77 S--RPVMIITEYMENGSLDKFLRE---NDGKFTVGQLVGMLRGIASGMKYLS-EMNYVHRDLAARNILVNSNLVCKVSDF 150 (266)
T ss_pred C--CceEEEEEcCCCCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCcceEEEcCCCCEEECcc
Confidence 7 88999999998 79888843 2247889999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCc------------ccc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRK------------SLS 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~------------~l~ 273 (852)
|++......... .. .....++..|+|||.+.+..++.++|+|||||++|+|++ |..||.... ...
T Consensus 151 g~~~~~~~~~~~-~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~ 228 (266)
T cd05033 151 GLSRRLEDSEAT-YT-TKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLP 228 (266)
T ss_pred chhhcccccccc-ee-ccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 998865311110 11 111234568999999977778899999999999999998 988884321 112
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
....+|..+.+++.+||+.+|.+||++.++++++.
T Consensus 229 ~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~ 263 (266)
T cd05033 229 PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLD 263 (266)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 34567899999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3e-31 Score=285.50 Aligned_cols=241 Identities=16% Similarity=0.225 Sum_probs=195.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcC-----CCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-----SNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-----~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
..|.+.+.|| .|+++.||.|..+. ++..|++|.+.... ....+.+|+.+++.++||||++++++
T Consensus 6 ~~~~~~~~lg--------~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~ 77 (277)
T cd05036 6 DSITLLRALG--------HGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGV 77 (277)
T ss_pred HHcEeeeECC--------CCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 4589999999 89999999999987 67899999887522 23457889999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC-
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLK---ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG- 199 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~---~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g- 199 (852)
+.+. ...|+||||+. +|.+++..... ....+++..+..++.||+.||.||| +.+++||||+|+||+++.+|
T Consensus 78 ~~~~--~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivH~dlkp~nil~~~~~~ 154 (277)
T cd05036 78 SFER--LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE-ENHFIHRDIAARNCLLTCKGP 154 (277)
T ss_pred EccC--CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCEeecccchheEEEeccCC
Confidence 8877 78999999997 79998854321 1235888999999999999999999 89999999999999998765
Q ss_pred --cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCc------
Q psy3914 200 --EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRK------ 270 (852)
Q Consensus 200 --~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~------ 270 (852)
.+||+|||++......... ........+..|+|||++.+..++.++|||||||++|+|++ |..||.+..
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~ 232 (277)
T cd05036 155 GRVAKIADFGMARDIYRASYY--RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVME 232 (277)
T ss_pred CcceEeccCccccccCCccce--ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 5999999998754221110 00111222457999999977778999999999999999997 899985432
Q ss_pred ------cccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 271 ------SLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 271 ------~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
....+..+|..+.+++.+||..+|..||++.++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l 275 (277)
T cd05036 233 FVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERI 275 (277)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHh
Confidence 1122456789999999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.5e-31 Score=276.68 Aligned_cols=233 Identities=18% Similarity=0.300 Sum_probs=199.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC--chHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD--TYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~--~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
.|++.+.|| .|+++.||.+....+++.|++|++.... ....+.+|+.+++.++||||+++++.+..+ .
T Consensus 1 ~y~~~~~l~--------~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~ 70 (253)
T cd05122 1 LFEILEKIG--------KGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKK--D 70 (253)
T ss_pred Cceeeeeec--------cCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecC--C
Confidence 388889999 8999999999999999999999998733 567899999999999999999999999987 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
..|+++||+. +|.+++... ...+++..+.+++.|++.||.||| ..+++||||+|+||+++.++.++|+|||++.
T Consensus 71 ~~~l~~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh-~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~ 146 (253)
T cd05122 71 ELWIVMEFCSGGSLKDLLKST---NQTLTESQIAYVCKELLKGLEYLH-SNGIIHRDIKAANILLTSDGEVKLIDFGLSA 146 (253)
T ss_pred eEEEEEecCCCCcHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhh-cCCEecCCCCHHHEEEccCCeEEEeeccccc
Confidence 9999999998 688887432 257899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------cCcC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------SNID 276 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------~~~~ 276 (852)
....... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||...... ....
T Consensus 147 ~~~~~~~-----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (253)
T cd05122 147 QLSDTKA-----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPE 221 (253)
T ss_pred ccccccc-----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCccc
Confidence 5432211 22345677999999997667888999999999999999999998543111 1112
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.++..+.+++++||..+|++||++.++++|
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 222 KWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 347889999999999999999999999987
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=295.87 Aligned_cols=243 Identities=19% Similarity=0.265 Sum_probs=201.5
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|+++.||+|++..+++.|+||++.. ......+.+|+.+++.++||||+++++++....
T Consensus 1 ~y~i~~~ig--------~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 72 (330)
T cd07834 1 RYELLKPIG--------SGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPS 72 (330)
T ss_pred Cceeeeeec--------CCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccC
Confidence 589999999 89999999999998999999999876 234567889999999999999999999987751
Q ss_pred ---CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 131 ---KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 131 ---~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
...+|+||||+. +|.+++. ....+++..+..++.||+.||.||| +.|++||||||+||+++.+|.++|+||
T Consensus 73 ~~~~~~~~lv~e~~~~~l~~~l~----~~~~l~~~~~~~i~~~l~~~l~~LH-~~gi~H~dlkp~nili~~~~~~~L~df 147 (330)
T cd07834 73 PEDFNDVYIVTELMETDLHKVIK----SPQPLTDDHIQYFLYQILRGLKYLH-SANVIHRDLKPSNILVNSNCDLKICDF 147 (330)
T ss_pred cccccceEEEecchhhhHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEEcCCCCEEEccc
Confidence 137999999999 6777763 2347899999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCC-CCCcchhHHhHHHHHHHHHhCCCCCCCCcccc------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSH-VTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------ 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------ 273 (852)
|++......... ........++..|+|||++.+. .++.++|+|||||++|+|++|..||.+.....
T Consensus 148 g~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 226 (330)
T cd07834 148 GLARGVDPDEDE-KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTP 226 (330)
T ss_pred CceEeecccccc-cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCC
Confidence 998754332110 0112234567899999998655 78899999999999999999999985432100
Q ss_pred ------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 ------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....++..+.+++.+||+.+|.+||++.+++.| +||++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~-----~~~~~ 294 (330)
T cd07834 227 SEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH-----PYLAQ 294 (330)
T ss_pred ChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC-----ccHHh
Confidence 123467889999999999999999999999997 78864
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.3e-31 Score=280.06 Aligned_cols=237 Identities=15% Similarity=0.208 Sum_probs=196.1
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
..|++.+.|| .|+++.||+|... ++..|+||.+.. ......+.+|+.++++++||||+++++++... +
T Consensus 6 ~~~~~~~~lg--------~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~ 74 (261)
T cd05068 6 TSIQLLRKLG--------AGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLE--E 74 (261)
T ss_pred hheeeEEEec--------ccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecC--C
Confidence 3589999999 8999999999875 457899999876 33456788999999999999999999999887 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
..|+||||+. +|.+++.... ...++...+..++.||+.||.||| +.+++||||+|+||+++.+|.+||+|||++.
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~ 151 (261)
T cd05068 75 PIYIVTELMKYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLE-AQNYIHRDLAARNVLVGENNICKVADFGLAR 151 (261)
T ss_pred CeeeeeecccCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHH-hCCeeeccCCcceEEEcCCCCEEECCcceEE
Confidence 8999999995 7988884321 346889999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCccc------------cCcCC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKSL------------SNIDN 277 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~l------------~~~~~ 277 (852)
...... .........+..|+|||++.+..++.++|+|||||++|+|++ |..||.+.... .....
T Consensus 152 ~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 228 (261)
T cd05068 152 VIKEDI---YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPG 228 (261)
T ss_pred EccCCc---ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCc
Confidence 543211 111111122347999999977788899999999999999999 89998543211 12346
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
++..+.+++.+|++.+|..||++.++++.+
T Consensus 229 ~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l 258 (261)
T cd05068 229 CPKELYDIMLDCWKEDPDDRPTFETLQWKL 258 (261)
T ss_pred CCHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence 789999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-31 Score=302.93 Aligned_cols=244 Identities=16% Similarity=0.241 Sum_probs=198.0
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCC-----CeEEEEEEEeC---CCchHHHHHHHHHHHhCC-CCCcceE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS-----NEKVTIFLNDS---ADTYEPALSYVKKLKTLR-HPSILTF 122 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~-----g~~VaVKv~~~---~~~~~~~~~E~~~Lk~Lr-HPnIlk~ 122 (852)
...+|++++.|| .|+||.||.|+.... +..|+||++.. ....+.+.+|+++|+.+. ||||+++
T Consensus 35 ~~~~~~~~~~LG--------~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l 106 (400)
T cd05105 35 PRDGLVLGRILG--------SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL 106 (400)
T ss_pred cccceehhheec--------CCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 456799999999 999999999987433 35799999976 223457889999999996 9999999
Q ss_pred eeeEEcCCCCeEEEEEeecc--cHHHHHHhhhh-----------------------------------------------
Q psy3914 123 LDSVESPSKSLVYLAVEYVE--PIFYHLDNTLK----------------------------------------------- 153 (852)
Q Consensus 123 ~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~----------------------------------------------- 153 (852)
++++.+. ..+||||||+. +|.++|.+...
T Consensus 107 ~~~~~~~--~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (400)
T cd05105 107 LGACTKS--GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQAD 184 (400)
T ss_pred EEEEccC--CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccc
Confidence 9999887 89999999998 79888854211
Q ss_pred ---------------------------------------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceeccc
Q psy3914 154 ---------------------------------------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHV 188 (852)
Q Consensus 154 ---------------------------------------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DI 188 (852)
....++...+..++.||+.||.||| +.+++||||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~ivH~di 263 (400)
T cd05105 185 TTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA-SKNCVHRDL 263 (400)
T ss_pred ccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCC
Confidence 0124778888999999999999999 899999999
Q ss_pred CCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCC
Q psy3914 189 NHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQST 267 (852)
Q Consensus 189 kp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~ 267 (852)
||+||+++.++.+||+|||++........ ........++..|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 264 kp~Nill~~~~~~kL~DfGla~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~ 341 (400)
T cd05105 264 AARNVLLAQGKIVKICDFGLARDIMHDSN--YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYP 341 (400)
T ss_pred ChHhEEEeCCCEEEEEeCCcceecccccc--ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCc
Confidence 99999999999999999999875432111 111122345678999999977788999999999999999997 888874
Q ss_pred CCc-------------cccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 268 NRK-------------SLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 268 ~~~-------------~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
... .......+|..+.+++.+||+.+|+.||++.++.+.+.
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~ 395 (400)
T cd05105 342 GMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVE 395 (400)
T ss_pred ccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHH
Confidence 321 12224567889999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-31 Score=290.62 Aligned_cols=245 Identities=18% Similarity=0.282 Sum_probs=196.9
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
..+|++.+.|| .|+++.||+|+++.+++.|+||++.. ......+.+|+++++.++||||+++++.+..
T Consensus 7 ~~~y~~~~~lg--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (311)
T cd07866 7 LRDYEILGKLG--------EGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVE 78 (311)
T ss_pred cccEEEEEEec--------cCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheec
Confidence 35699999999 89999999999999999999998865 2223467899999999999999999998754
Q ss_pred CC------CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcE
Q psy3914 129 PS------KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEW 201 (852)
Q Consensus 129 ~~------~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~ 201 (852)
.. ...+|+|+||+. +|...+.. ....+++..+..++.||++||.||| +.+++|+||+|+||+++++|.+
T Consensus 79 ~~~~~~~~~~~~~lv~~~~~~~l~~~~~~---~~~~~~~~~~~~i~~~l~~al~~lH-~~~i~H~dl~p~nil~~~~~~~ 154 (311)
T cd07866 79 RPDKSKRKRGSVYMVTPYMDHDLSGLLEN---PSVKLTESQIKCYMLQLLEGINYLH-ENHILHRDIKAANILIDNQGIL 154 (311)
T ss_pred ccccccccCceEEEEEecCCcCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEECCCCCE
Confidence 31 145899999998 67666632 2357899999999999999999999 8999999999999999999999
Q ss_pred EEcccchhhccccccCCCC-------cccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc
Q psy3914 202 KLGGLEYMEKISEASCIPM-------KRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS 273 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~-------~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~ 273 (852)
||+|||++........... .......+++.|+|||++. ...++.++|+|||||++|+|++|..||.+.....
T Consensus 155 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~ 234 (311)
T cd07866 155 KIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID 234 (311)
T ss_pred EECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999999875433211111 1112345677899999874 4457889999999999999999999885432110
Q ss_pred -----------------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCC
Q psy3914 274 -----------------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGG 312 (852)
Q Consensus 274 -----------------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~ 312 (852)
....+++.+.+++.+||..+|.+|||+.+++.| +
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~-----~ 309 (311)
T cd07866 235 QLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH-----P 309 (311)
T ss_pred HHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC-----C
Confidence 012344678899999999999999999999997 7
Q ss_pred CC
Q psy3914 313 YF 314 (852)
Q Consensus 313 fF 314 (852)
||
T Consensus 310 ~f 311 (311)
T cd07866 310 YF 311 (311)
T ss_pred CC
Confidence 87
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.9e-31 Score=281.24 Aligned_cols=228 Identities=17% Similarity=0.242 Sum_probs=186.5
Q ss_pred cCCceEEEEEEE--cCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKK--KGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~--k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|+++.||+|.. +.++..|+||++... ...+.+.+|+.+++.++||||+++++.++. ...++||||+. +
T Consensus 5 ~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~lv~e~~~~~~ 81 (257)
T cd05116 5 SGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA---ESWMLVMELAELGP 81 (257)
T ss_pred CcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC---CCcEEEEecCCCCc
Confidence 899999999964 456789999998762 234567889999999999999999998864 46799999998 6
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|.+++.. ...+++..+..++.||+.||.||| +.+++||||||.||+++.++.+||+|||++......... ....
T Consensus 82 L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH-~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~ 155 (257)
T cd05116 82 LNKFLQK----NKHVTEKNITELVHQVSMGMKYLE-ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY-YKAK 155 (257)
T ss_pred HHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe-eeec
Confidence 8888842 256889999999999999999999 899999999999999999999999999998754322111 1111
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCCCChhHHHHHHHhc
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDNIPENLKRVYLELI 290 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~ip~~L~~li~~lL 290 (852)
....++..|+|||.+....++.++|+|||||++|||++ |..||.+... ...+..+|..+.++|.+||
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~ 235 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCW 235 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHh
Confidence 12233568999999877778889999999999999998 8999854311 2334578999999999999
Q ss_pred cCCCCCCCCHHHHHHhhc
Q psy3914 291 SERPNQRPNPADFIMRNR 308 (852)
Q Consensus 291 ~~nP~~Rps~~elL~~l~ 308 (852)
+.||.+||++.++.+.+.
T Consensus 236 ~~~p~~Rp~~~~i~~~l~ 253 (257)
T cd05116 236 TYGVDERPGFAVVELRLR 253 (257)
T ss_pred ccCchhCcCHHHHHHHHh
Confidence 999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.5e-31 Score=279.70 Aligned_cols=233 Identities=15% Similarity=0.219 Sum_probs=193.7
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLV 134 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~ 134 (852)
.|++.+.|| .|+++.||+|.. .|..|++|.+........+.+|+.+++.++||||+++++++... ....
T Consensus 7 ~~~~~~~lg--------~g~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~ 75 (256)
T cd05082 7 ELKLLQTIG--------KGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGL 75 (256)
T ss_pred hCeeeeeec--------ccCCCeEEEEEE--cCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-CCce
Confidence 589999999 899999999977 47889999998755667789999999999999999999976432 2679
Q ss_pred EEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhcc
Q psy3914 135 YLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKI 212 (852)
Q Consensus 135 yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~ 212 (852)
|+|+||+. +|.+++.+. ....+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.+||+|||++...
T Consensus 76 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~ 152 (256)
T cd05082 76 YIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLE-ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 152 (256)
T ss_pred EEEEECCCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH-hCCEeccccchheEEEcCCCcEEecCCccceec
Confidence 99999997 798888432 2235788999999999999999999 899999999999999999999999999998643
Q ss_pred ccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCCCC
Q psy3914 213 SEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDNIP 279 (852)
Q Consensus 213 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~ip 279 (852)
.... ....++..|+|||++.+..++.++|+|||||++|+|++ |..||..... ......+|
T Consensus 153 ~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (256)
T cd05082 153 SSTQ-------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP 225 (256)
T ss_pred cccC-------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCC
Confidence 2211 12223457999999977788899999999999999997 8888853211 11235678
Q ss_pred hhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 280 ENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 280 ~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
+.+.+++.+|++.+|.+||++.++++.+.
T Consensus 226 ~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 254 (256)
T cd05082 226 PVVYDVMKQCWHLDAATRPSFLQLREQLE 254 (256)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHHh
Confidence 99999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-31 Score=288.11 Aligned_cols=241 Identities=14% Similarity=0.175 Sum_probs=196.5
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCC-CCCcceEeeeEEcCCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLR-HPSILTFLDSVESPSK 131 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~~~ 131 (852)
|+..+.|| .|++|.||.+.+..+++.|+||.+... .....+.+|+..+.++. ||||+++++++..+
T Consensus 6 ~~~~~~lg--------~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~-- 75 (288)
T cd06616 6 LKDLGEIG--------RGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE-- 75 (288)
T ss_pred hHHHHHhC--------CCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC--
Confidence 56678888 899999999999999999999998762 23446788999999996 99999999999887
Q ss_pred CeEEEEEeecc-cHHHHHHhh-hhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNT-LKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~-~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
...|++|||+. +|.++.... ......+++..+..++.|++.||+|||+..+++||||||+||+++.++.+||+|||++
T Consensus 76 ~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 155 (288)
T cd06616 76 GDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGIS 155 (288)
T ss_pred CcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchh
Confidence 88999999988 665554221 1233678999999999999999999995579999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCC---CCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------c-
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSH---VTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------S- 273 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~---~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------~- 273 (852)
....... ......++..|+|||++.+. .++.++|+|||||++|+|++|..||...... .
T Consensus 156 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd06616 156 GQLVDSI-----AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPI 230 (288)
T ss_pred HHhccCC-----ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCc
Confidence 7543211 11123467789999998544 6888999999999999999999998532110 0
Q ss_pred ----CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 ----NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ----~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....++..+.+++.+||+.+|.+||++.+++.| +||..
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~-----~~~~~ 272 (288)
T cd06616 231 LSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH-----PFIKD 272 (288)
T ss_pred CCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC-----hhhhc
Confidence 012478889999999999999999999999997 88864
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.2e-31 Score=287.46 Aligned_cols=243 Identities=14% Similarity=0.163 Sum_probs=199.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.+| .|+++.||++.++.+++.|+||.+... .....+.+|+++++.++||||+++++.++..
T Consensus 2 ~y~~~~~l~--------~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 73 (305)
T cd05609 2 DFETIKLIS--------NGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETK 73 (305)
T ss_pred CceEeeEee--------cCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecC
Confidence 588999999 899999999999999999999998762 2345677899999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
..+|+||||+. +|.+++.. .+.+++..+..++.|++.||.||| +.+++||||+|+||+++.+|.+||+|||
T Consensus 74 --~~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl~p~NIll~~~~~~~l~dfg 146 (305)
T cd05609 74 --RHLCMVMEYVEGGDCATLLKN----IGALPVDMARMYFAETVLALEYLH-NYGIVHRDLKPDNLLITSMGHIKLTDFG 146 (305)
T ss_pred --CEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCchHHEEECCCCCEEEeeCC
Confidence 89999999998 78888843 256889999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCC-----------CcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----
Q psy3914 208 YMEKISEASCIP-----------MKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---- 272 (852)
Q Consensus 208 ~a~~~~~~~~~~-----------~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---- 272 (852)
++.......... ........++..|+|||.+.+..++.++|+|||||++|+|++|..||.+....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~ 226 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG 226 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 875211000000 00111235677899999997777889999999999999999999998653211
Q ss_pred ----------cCcCCCChhHHHHHHHhccCCCCCCCC---HHHHHHhhcCCCCCCcch
Q psy3914 273 ----------SNIDNIPENLKRVYLELISERPNQRPN---PADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 ----------~~~~~ip~~L~~li~~lL~~nP~~Rps---~~elL~~l~~~~~fF~n~ 317 (852)
.....+|..+.+++.+||+.+|..||+ +.++++| +||...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~-----~~~~~~ 279 (305)
T cd05609 227 QVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH-----RFFLGL 279 (305)
T ss_pred HHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC-----ccccCC
Confidence 111257889999999999999999998 5677775 888653
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-31 Score=285.37 Aligned_cols=240 Identities=17% Similarity=0.275 Sum_probs=204.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCC-CCCcceEeeeEEc
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLR-HPSILTFLDSVES 128 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~ 128 (852)
+|.+.+.|| .|+++.||.|..+.+|+.|+||++.. ......+.+|+.+++.++ ||||+++++++..
T Consensus 2 ~y~~~~~lg--------~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~ 73 (280)
T cd05581 2 DFKFGKIIG--------EGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQD 73 (280)
T ss_pred CceEeeeec--------CCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcC
Confidence 599999999 99999999999999999999999976 223457888999999999 9999999999988
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. +.+|+|||++. +|.+++.+ .+.++...+..++.||+.||.||| +.+++|+||+|+||+++.+|.++|+||
T Consensus 74 ~--~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~Lh-~~~~~H~dl~~~ni~i~~~~~~~l~df 146 (280)
T cd05581 74 E--ENLYFVLEYAPNGELLQYIRK----YGSLDEKCTRFYAAEILLALEYLH-SKGIIHRDLKPENILLDKDMHIKITDF 146 (280)
T ss_pred C--ceEEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecCCCHHHeEECCCCCEEecCC
Confidence 7 89999999996 78888843 247899999999999999999999 999999999999999999999999999
Q ss_pred chhhccccccCCC----------------CcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc
Q psy3914 207 EYMEKISEASCIP----------------MKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK 270 (852)
Q Consensus 207 g~a~~~~~~~~~~----------------~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~ 270 (852)
|++.......... ........++..|+|||+.....++.++|+|||||++|++++|..||....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (280)
T cd05581 147 GTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN 226 (280)
T ss_pred ccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 9987543322100 112223457789999999877778889999999999999999999996442
Q ss_pred c-----------ccCcCCCChhHHHHHHHhccCCCCCCCCH----HHHHHhhcCCCCCC
Q psy3914 271 S-----------LSNIDNIPENLKRVYLELISERPNQRPNP----ADFIMRNRKPGGYF 314 (852)
Q Consensus 271 ~-----------l~~~~~ip~~L~~li~~lL~~nP~~Rps~----~elL~~l~~~~~fF 314 (852)
. ......+|+.+.+++.+||+.+|.+||++ .+++.| +||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~-----~~~ 280 (280)
T cd05581 227 EYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH-----PFF 280 (280)
T ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC-----CCC
Confidence 2 12345678999999999999999999999 999997 776
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.5e-31 Score=279.74 Aligned_cols=235 Identities=16% Similarity=0.214 Sum_probs=201.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|+++.||+++++.+++.++||++.. ......+.+|+++++.++||||+++++++.+.
T Consensus 1 ~y~~~~~i~--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~- 71 (256)
T cd08530 1 DFKVLKKLG--------KGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG- 71 (256)
T ss_pred CceEeeeec--------CCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC-
Confidence 488999999 89999999999999999999999876 22344667899999999999999999999987
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
...|+|+||+. +|..++.+.......+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.+||+|||+
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh-~~~i~h~~l~~~ni~~~~~~~~kl~d~g~ 149 (256)
T cd08530 72 -NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH-EQKILHRDLKSANILLVANDLVKIGDLGI 149 (256)
T ss_pred -CEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh-hCCcccCCCCcceEEEecCCcEEEeeccc
Confidence 89999999997 799888654444567899999999999999999999 99999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------cCcC
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------SNID 276 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------~~~~ 276 (852)
+...... ......++..|++||.+.+..++.++|+||||+++|+|++|..||...... ....
T Consensus 150 ~~~~~~~------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 223 (256)
T cd08530 150 SKVLKKN------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPP 223 (256)
T ss_pred hhhhccC------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCch
Confidence 8754322 112234677999999997777888999999999999999999998543321 1224
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.++..+.+++.+||+.+|.+||++.++++|
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 224 IYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred hhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 567889999999999999999999999987
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-31 Score=290.90 Aligned_cols=235 Identities=16% Similarity=0.246 Sum_probs=198.5
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
|.....|| .|+++.||.+.+..++..|+||.+.. ....+.+.+|+..++.++||||+++++.+... +.
T Consensus 24 ~~~~~~lg--------~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~--~~ 93 (292)
T cd06658 24 LDSFIKIG--------EGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVG--DE 93 (292)
T ss_pred Hhhhhccc--------CCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecC--Ce
Confidence 55567788 89999999999999999999999876 23445688999999999999999999999987 89
Q ss_pred EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 134 VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 134 ~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
.|+||||+. +|.+++. .+.+++..+..++.||+.||.||| +.+++||||+|+||+++.++.+||+|||++..
T Consensus 94 ~~lv~e~~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~~l~~LH-~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (292)
T cd06658 94 LWVVMEFLEGGALTDIVT-----HTRMNEEQIATVCLSVLRALSYLH-NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQ 167 (292)
T ss_pred EEEEEeCCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH-HCCEeecCCCHHHEEEcCCCCEEEccCcchhh
Confidence 999999998 6777763 246889999999999999999999 89999999999999999999999999999874
Q ss_pred cccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------cCcCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------SNIDN 277 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------~~~~~ 277 (852)
..... .......++..|+|||++.+..++.++|+|||||++|||++|..||.+.... .....
T Consensus 168 ~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (292)
T cd06658 168 VSKEV----PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHK 243 (292)
T ss_pred ccccc----ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccc
Confidence 43211 1112345778999999997777888999999999999999999998643321 11235
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
++..+..++.+|+..+|.+||++.++++| +||.
T Consensus 244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~~-----~~~~ 276 (292)
T cd06658 244 VSSVLRGFLDLMLVREPSQRATAQELLQH-----PFLK 276 (292)
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhhC-----hhhh
Confidence 67889999999999999999999999997 7775
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=295.82 Aligned_cols=243 Identities=17% Similarity=0.284 Sum_probs=195.3
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcC-----CCeEEEEEEEeCC---CchHHHHHHHHHHHhC-CCCCcceEee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-----SNEKVTIFLNDSA---DTYEPALSYVKKLKTL-RHPSILTFLD 124 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-----~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~L-rHPnIlk~~d 124 (852)
.+|++.+.|| .|++|.||.|.... +++.|++|++... .....+.+|+.+++++ +||||+++++
T Consensus 7 ~~~~i~~~lG--------~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~ 78 (337)
T cd05054 7 DRLKLGKPLG--------RGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLG 78 (337)
T ss_pred HHhhhhcccc--------cCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheee
Confidence 4699999999 99999999997543 4578999998752 2234677899999999 7999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhh-------------------------------------------------
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLK------------------------------------------------- 153 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~------------------------------------------------- 153 (852)
.+... ...+|+++||+. +|.+++.....
T Consensus 79 ~~~~~-~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (337)
T cd05054 79 ACTKP-GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVE 157 (337)
T ss_pred eEecC-CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcc
Confidence 87653 367999999998 78888743211
Q ss_pred --------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccccc
Q psy3914 154 --------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSR 225 (852)
Q Consensus 154 --------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~ 225 (852)
....++...+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||++..+..... ......
T Consensus 158 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH-~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~--~~~~~~ 234 (337)
T cd05054 158 EDEEGDELYKEPLTLEDLISYSFQVARGMEFLA-SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD--YVRKGD 234 (337)
T ss_pred cchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc--hhhccC
Confidence 0136788899999999999999999 89999999999999999999999999999875432111 111123
Q ss_pred ccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-------------ccCcCCCChhHHHHHHHhcc
Q psy3914 226 YEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS-------------LSNIDNIPENLKRVYLELIS 291 (852)
Q Consensus 226 ~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~-------------l~~~~~ip~~L~~li~~lL~ 291 (852)
..++..|+|||++.+..++.++|||||||++|||++ |..||.+... ......+++.+.+++.+||+
T Consensus 235 ~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 314 (337)
T cd05054 235 ARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWH 314 (337)
T ss_pred CCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHcc
Confidence 345668999999988889999999999999999998 9999854221 11234567889999999999
Q ss_pred CCCCCCCCHHHHHHhhc
Q psy3914 292 ERPNQRPNPADFIMRNR 308 (852)
Q Consensus 292 ~nP~~Rps~~elL~~l~ 308 (852)
.+|..||++.++++++.
T Consensus 315 ~~p~~RPs~~ell~~l~ 331 (337)
T cd05054 315 NNPEDRPTFSELVEILG 331 (337)
T ss_pred CChhhCcCHHHHHHHHH
Confidence 99999999999999864
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=284.69 Aligned_cols=237 Identities=16% Similarity=0.260 Sum_probs=200.0
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
|++.+.|| .|+++.||+|.+..++..|+||++.. ......+.+|++.+++++||||+++++.+..+ .
T Consensus 6 ~~~~~~ig--------~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~ 75 (277)
T cd06641 6 FTKLEKIG--------KGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD--T 75 (277)
T ss_pred hhhheeEe--------ecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC--C
Confidence 67788899 89999999999999999999999876 22345688999999999999999999999987 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
..|+||||+. +|..++.. ..++...+..++.|++.+|.||| +.+++|+||+|+||+++.+|.++|+|||++.
T Consensus 76 ~~~lv~e~~~~~~l~~~i~~-----~~~~~~~~~~~~~~l~~~l~~lh-~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06641 76 KLWIIMEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLH-SEKKIHRDIKAANVLLSEHGEVKLADFGVAG 149 (277)
T ss_pred eEEEEEEeCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHc-cCCeecCCCCHHhEEECCCCCEEEeecccce
Confidence 9999999998 68777732 46889999999999999999999 8999999999999999999999999999976
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------cCcCCC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------SNIDNI 278 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------~~~~~i 278 (852)
.+.... .......++..|+|||.+.+...+.++|+|||||++|+|++|..||...... .....+
T Consensus 150 ~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (277)
T cd06641 150 QLTDTQ----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNY 225 (277)
T ss_pred ecccch----hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCccc
Confidence 442211 1112345677899999987777788999999999999999999998532211 122457
Q ss_pred ChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 279 PENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 279 p~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
|..+.+++.+||..+|..||++.+++.| +||.+.
T Consensus 226 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~~-----~~~~~~ 259 (277)
T cd06641 226 SKPLKEFVEACLNKEPSFRPTAKELLKH-----KFIVRF 259 (277)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHhC-----HHHhhh
Confidence 8899999999999999999999999997 787664
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-31 Score=284.98 Aligned_cols=236 Identities=18% Similarity=0.265 Sum_probs=198.8
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
|...+.|| .|+++.||.|.++.+++.|+||+++. ......+.+|+.+++.++||||+++++++... ..
T Consensus 21 ~~~~~~lg--------~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~--~~ 90 (285)
T cd06648 21 LDNFVKIG--------EGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVG--DE 90 (285)
T ss_pred hhcceEec--------cCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcC--Ce
Confidence 44456888 89999999999999999999999876 23345678999999999999999999999887 88
Q ss_pred EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 134 VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 134 ~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
.|+|+||+. +|.+++.. ..++...+..++.||+.||.||| +.+++||||+|+||+++.+|.++|+|||++..
T Consensus 91 ~~~v~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~ 164 (285)
T cd06648 91 LWVVMEFLEGGALTDIVTH-----TRMNEEQIATVCLAVLKALSFLH-AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQ 164 (285)
T ss_pred EEEEEeccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCChhhEEEcCCCcEEEcccccchh
Confidence 999999997 78888743 46889999999999999999999 89999999999999999999999999998764
Q ss_pred cccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------cCcCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------SNIDN 277 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------~~~~~ 277 (852)
..... .......++..|+|||+..+..++.++|+|||||++|+|++|..||.+.... .....
T Consensus 165 ~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (285)
T cd06648 165 VSKEV----PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHK 240 (285)
T ss_pred hccCC----cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCccccc
Confidence 32211 1112345778999999997777889999999999999999999998543211 11234
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
++..+.+++.+||+.+|.+||++.++++| +||.+
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~-----~~~~~ 274 (285)
T cd06648 241 VSPRLRSFLDRMLVRDPAQRATAAELLNH-----PFLAK 274 (285)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHccC-----ccccc
Confidence 78899999999999999999999999997 88865
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=295.40 Aligned_cols=240 Identities=16% Similarity=0.236 Sum_probs=198.5
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|.+.+.|| .|++++||.|++..++..|+||.+.. ......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~y~~~~~lg--------~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~ 76 (337)
T cd07858 5 TKYVPIKPIG--------RGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPP 76 (337)
T ss_pred cceeEEEEec--------cCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecc
Confidence 4699999999 89999999999999999999998875 22344677899999999999999999987653
Q ss_pred C---CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 130 S---KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 130 ~---~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
. ...+|+|+||+. +|.+++. ..+.+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.+||+|
T Consensus 77 ~~~~~~~~~lv~e~~~~~L~~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH-~~~i~H~dlkp~Nil~~~~~~~kL~D 151 (337)
T cd07858 77 HREAFNDVYIVYELMDTDLHQIIR----SSQTLSDDHCQYFLYQLLRGLKYIH-SANVLHRDLKPSNLLLNANCDLKICD 151 (337)
T ss_pred cccccCcEEEEEeCCCCCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHH-hCCEecCCCCHHHEEEcCCCCEEECc
Confidence 1 135899999998 7877773 3367899999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------ 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------ 272 (852)
||++....... .......++..|+|||++. ...++.++|+|||||++|+|++|..||.+.+..
T Consensus 152 fg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 227 (337)
T cd07858 152 FGLARTTSEKG----DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGS 227 (337)
T ss_pred CccccccCCCc----ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCC
Confidence 99987543211 1112345677899999974 356888999999999999999999998543210
Q ss_pred ------------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 273 ------------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 273 ------------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
.....+++.+.+++++||+.+|.+||++.++++| +||.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h-----~~~~ 295 (337)
T cd07858 228 PSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH-----PYLA 295 (337)
T ss_pred CChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC-----cchh
Confidence 0123578889999999999999999999999998 7875
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-31 Score=283.71 Aligned_cols=241 Identities=16% Similarity=0.216 Sum_probs=192.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEE----cCCCeEEEEEEEeCC--CchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKK----KGSNEKVTIFLNDSA--DTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~----k~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
..|++.+.|| .|+++.||.|.. ..++..|+||.+... .....+.+|+++++.++||||+++++++.
T Consensus 4 ~~~~~~~~lg--------~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 75 (284)
T cd05081 4 RHLKFIQQLG--------KGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCY 75 (284)
T ss_pred ccceeeeecc--------CCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEc
Confidence 4689999999 999999999974 457889999998762 23457889999999999999999999876
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
......+|+||||+. +|.+++.+. ...+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+|
T Consensus 76 ~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~aL~~LH-~~~i~H~dlkp~nili~~~~~~~l~d 151 (284)
T cd05081 76 SAGRRNLRLVMEYLPYGSLRDYLQKH---RERLDHRKLLLYASQICKGMEYLG-SKRYVHRDLATRNILVESENRVKIGD 151 (284)
T ss_pred cCCCCceEEEEEecCCCCHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCHhhEEECCCCeEEECC
Confidence 543467999999997 799888432 245889999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-------------- 271 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-------------- 271 (852)
||++......... ........++..|+|||+..+..++.++|+|||||++|||++|..++.....
T Consensus 152 fg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd05081 152 FGLTKVLPQDKEY-YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQM 230 (284)
T ss_pred CcccccccCCCcc-eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhccccccccc
Confidence 9998754321111 0000111233469999999777888999999999999999998655421110
Q ss_pred --------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 --------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 --------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|..+.+++.+||..+|+.|||+.+++..+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l 280 (284)
T cd05081 231 IVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQV 280 (284)
T ss_pred chHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence 011245788999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-31 Score=284.55 Aligned_cols=239 Identities=15% Similarity=0.269 Sum_probs=203.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC-chHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD-TYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~-~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
.|++.+.++ .|+++.||.|.+..++..|++|+++... ....+.+|+..++.++||||+++++.+... ..
T Consensus 20 ~~~~~~~l~--------~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~ 89 (286)
T cd06614 20 LYKNLEKIG--------EGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVG--DE 89 (286)
T ss_pred cchHhHhcc--------CCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEEC--CE
Confidence 488899999 8999999999999899999999998733 366788999999999999999999999988 89
Q ss_pred EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 134 VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 134 ~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
.|+|+||+. +|.+++.... ..++...+..++.||+.||.||| +.|++|+||+|+||+++.+|.++|+|||++..
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH-~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~ 165 (286)
T cd06614 90 LWVVMEYMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLH-SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQ 165 (286)
T ss_pred EEEEEeccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHH-hCCeeeCCCChhhEEEcCCCCEEECccchhhh
Confidence 999999998 7999885421 37899999999999999999999 89999999999999999999999999999764
Q ss_pred cccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------cCcCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------SNIDN 277 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------~~~~~ 277 (852)
...... ......++..|++||++.+..++.++|+|||||++|+|++|..||.+.... .....
T Consensus 166 ~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (286)
T cd06614 166 LTKEKS----KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEK 241 (286)
T ss_pred hccchh----hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhh
Confidence 432111 112234667899999987777889999999999999999999998643221 11234
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
+|..+.+++++||+.+|..||++.+++.+ +||..
T Consensus 242 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~-----~~~~~ 275 (286)
T cd06614 242 WSPEFKDFLNKCLVKDPEKRPSAEELLQH-----PFLKK 275 (286)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHhhC-----hHhhc
Confidence 78899999999999999999999999997 77765
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=284.71 Aligned_cols=236 Identities=20% Similarity=0.283 Sum_probs=198.0
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
|++.+.|| .|+++.||.|+...+++.|++|++.. ......+.+|+.+++.++||||+++++++.+.
T Consensus 1 y~~~~~ig--------~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-- 70 (282)
T cd07829 1 YEKLEKLG--------EGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE-- 70 (282)
T ss_pred Ceeehccc--------ccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC--
Confidence 67778888 89999999999999999999999987 23345778899999999999999999999987
Q ss_pred CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
..+|+|+||+. +|.+++.+.. ..+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.+||+|||++.
T Consensus 71 ~~~~~v~e~~~~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~LH-~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~ 146 (282)
T cd07829 71 RKLYLVFEYCDMDLKKYLDKRP---GPLSPNLIKSIMYQLLRGLAYCH-SHRILHRDLKPQNILINRDGVLKLADFGLAR 146 (282)
T ss_pred CceEEEecCcCcCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCChheEEEcCCCCEEEecCCccc
Confidence 89999999998 7888885321 46899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCC-CCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----------------
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSH-VTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----------------- 272 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----------------- 272 (852)
...... .......++..|+|||.+... .++.++|+|||||++||+++|..||.+....
T Consensus 147 ~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (282)
T cd07829 147 AFGIPL----RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEES 222 (282)
T ss_pred ccCCCc----cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHH
Confidence 543211 111223345689999998444 7888999999999999999999888543211
Q ss_pred -----------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 -----------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 -----------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.....++..+.+++++||..+|.+||++.+++.| +||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~-----p~~ 282 (282)
T cd07829 223 WPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH-----PYF 282 (282)
T ss_pred HHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC-----cCC
Confidence 1123457889999999999999999999999997 887
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG0596|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-32 Score=299.03 Aligned_cols=242 Identities=14% Similarity=0.185 Sum_probs=195.2
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCC-CCCcceEeeeE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLR-HPSILTFLDSV 126 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~ 126 (852)
++..|++.++|| .||...||++..- +.+.+++|.+.. .....-+++|+..|.+|+ |.+|++++|+-
T Consensus 359 kg~~Yeilk~iG--------~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYE 429 (677)
T KOG0596|consen 359 KGREYEILKQIG--------SGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYE 429 (677)
T ss_pred CcchhhHHHhhc--------CCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeee
Confidence 566799999999 8999999999874 556666665443 445667899999999997 99999999998
Q ss_pred EcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 127 ESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
..+ +++|+||||-. +|...|.+.. ..+..-+++.+..||+.|++++| +.||||.||||.|+++ -.|.+||+|
T Consensus 430 v~d--~~lYmvmE~Gd~DL~kiL~k~~---~~~~~~~lk~ywkqML~aV~~IH-~~gIVHSDLKPANFLl-VkG~LKLID 502 (677)
T KOG0596|consen 430 VTD--GYLYMVMECGDIDLNKILKKKK---SIDPDWFLKFYWKQMLLAVKTIH-QHGIVHSDLKPANFLL-VKGRLKLID 502 (677)
T ss_pred ccC--ceEEEEeecccccHHHHHHhcc---CCCchHHHHHHHHHHHHHHHHHH-HhceeecCCCcccEEE-EeeeEEeee
Confidence 888 99999999998 8999995432 33444589999999999999999 9999999999999988 578999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccC-----------CCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-----------HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-- 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-----------~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-- 272 (852)
||++..+..+...... ...+||+.||+||.+.. -..+.++||||||||||+|+.|+.||......
T Consensus 503 FGIA~aI~~DTTsI~k--dsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~a 580 (677)
T KOG0596|consen 503 FGIANAIQPDTTSIVK--DSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIA 580 (677)
T ss_pred echhcccCccccceee--ccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHH
Confidence 9999866544332222 25689999999999721 12567899999999999999999999432110
Q ss_pred -----c------CcCCCCh--hHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 -----S------NIDNIPE--NLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 -----~------~~~~ip~--~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
. .+..+|+ .+..+++.||..||++||++.++|+| +|..-
T Consensus 581 Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh-----pFl~~ 632 (677)
T KOG0596|consen 581 KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH-----PFLQI 632 (677)
T ss_pred HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC-----ccccc
Confidence 0 1233333 38999999999999999999999998 77754
|
|
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-31 Score=284.39 Aligned_cols=237 Identities=14% Similarity=0.132 Sum_probs=191.2
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEE----EcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGK----KKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~----~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
|++.+.|| .|++++||.++ ...++..|++|++... .....+.+|++.|+.++||||+++++++..
T Consensus 6 ~~~~~~lg--------~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 77 (283)
T cd05080 6 LKKIRVLG--------EGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSE 77 (283)
T ss_pred ceeceecc--------cCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 48899999 89999997765 4457889999998762 234567899999999999999999998876
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
.....+|+||||+. +|.+++.. ..+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+||
T Consensus 78 ~~~~~~~lv~e~~~~~~l~~~~~~-----~~l~~~~~~~i~~~l~~~l~~lH-~~~i~H~dlkp~Nili~~~~~~~l~df 151 (283)
T cd05080 78 QGGKGLQLIMEYVPLGSLRDYLPK-----HKLNLAQLLLFAQQICEGMAYLH-SQHYIHRDLAARNVLLDNDRLVKIGDF 151 (283)
T ss_pred CCCceEEEEecCCCCCCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-HCCeeccccChheEEEcCCCcEEEeec
Confidence 43467999999998 68888742 45899999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc---------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------- 271 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------- 271 (852)
|++......... ........++..|+|||.+.+..++.++|+|||||++|+|++|..|+.....
T Consensus 152 g~~~~~~~~~~~-~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd05080 152 GLAKAVPEGHEY-YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTV 230 (283)
T ss_pred ccccccCCcchh-hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccch
Confidence 998754321110 0111112345579999998777788999999999999999999888742110
Q ss_pred ------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 ------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 ------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|..+.+++.+||+.+|+.||++.++++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l 278 (283)
T cd05080 231 VRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPIL 278 (283)
T ss_pred hhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence 001245678999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-31 Score=281.44 Aligned_cols=242 Identities=12% Similarity=0.163 Sum_probs=192.6
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCe--EEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE--KVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~--~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
|.+++.|| .|+++.||+|....++. .|+||.+.. ......+.+|+..++.++||||+++++.+...
T Consensus 1 ~~i~~~ig--------~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 72 (272)
T cd05075 1 LALGKTLG--------EGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQT 72 (272)
T ss_pred CccccccC--------cccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccC
Confidence 45788898 89999999999887775 689998865 22345678899999999999999999976432
Q ss_pred ----CCCeEEEEEeecc--cHHHHHHhhh--hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcE
Q psy3914 130 ----SKSLVYLAVEYVE--PIFYHLDNTL--KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEW 201 (852)
Q Consensus 130 ----~~~~~yIVtE~v~--~L~~~L~~~~--~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~ 201 (852)
.....+++|||+. +|.+++.... .....+++..+..++.||+.||.||| +.+++||||||+||+++.++.+
T Consensus 73 ~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~ 151 (272)
T cd05075 73 VESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS-SKSFIHRDLAARNCMLNENMNV 151 (272)
T ss_pred CcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH-HCCeeccccchhheEEcCCCCE
Confidence 1135789999998 7887763221 12345789999999999999999999 8999999999999999999999
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc---------
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS--------- 271 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~--------- 271 (852)
||+|||++........ ........+++.|++||+..+..++.++|+|||||++|+|++ |..||.+...
T Consensus 152 kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~ 229 (272)
T cd05075 152 CVADFGLSKKIYNGDY--YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQ 229 (272)
T ss_pred EECCCCcccccCcccc--eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 9999999875432111 111112234568999999988888999999999999999999 7888854321
Q ss_pred ---ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 272 ---LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 272 ---l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
......++..+.+++.+||..+|.+||++.++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 269 (272)
T cd05075 230 GNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELE 269 (272)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 1224567889999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=284.74 Aligned_cols=239 Identities=21% Similarity=0.285 Sum_probs=196.2
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
|++.+.|| .|+++.||+|+...+|+.|+||++... .....+.+|+.+++.++||||+++++++....+
T Consensus 1 y~~~~~l~--------~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 72 (287)
T cd07840 1 YEKIAQIG--------EGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGK 72 (287)
T ss_pred CeeeEEec--------cCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCC
Confidence 77888999 899999999999999999999999872 234567889999999999999999999886434
Q ss_pred CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
...|+|+||+. +|..++.. ....+++..+..++.||+.||.||| +.+++|+||+|+||+++++|.+||+|||++.
T Consensus 73 ~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~i~~~i~~al~~LH-~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~ 148 (287)
T cd07840 73 GSIYMVFEYMDHDLTGLLDS---PEVKFTESQIKCYMKQLLEGLQYLH-SNGILHRDIKGSNILINNDGVLKLADFGLAR 148 (287)
T ss_pred CcEEEEeccccccHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCcHHHeEEcCCCCEEEcccccee
Confidence 68999999999 67777632 1257899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc----------------
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---------------- 273 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---------------- 273 (852)
....... .......++..|+|||.+. ...++.++|+|||||++|+|++|..||.......
T Consensus 149 ~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 225 (287)
T cd07840 149 PYTKRNS---ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDEN 225 (287)
T ss_pred eccCCCc---ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhh
Confidence 5533221 1112234567899999874 4557889999999999999999999985322100
Q ss_pred -------------------------CcCC-CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 274 -------------------------NIDN-IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 274 -------------------------~~~~-ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.+.. +++.+.+++++||+.+|.+||++.+++++ +||
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~-----~~~ 287 (287)
T cd07840 226 WPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH-----EYF 287 (287)
T ss_pred ccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC-----cCC
Confidence 0112 28889999999999999999999999997 776
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-31 Score=285.59 Aligned_cols=241 Identities=15% Similarity=0.205 Sum_probs=195.4
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCC----------------eEEEEEEEeCC---CchHHHHHHHHHHHhC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN----------------EKVTIFLNDSA---DTYEPALSYVKKLKTL 114 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g----------------~~VaVKv~~~~---~~~~~~~~E~~~Lk~L 114 (852)
.+|++.+.|| .|++|.||.|+....+ ..|++|.+... .....+.+|+++++.+
T Consensus 5 ~~~~~~~~lg--------~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l 76 (296)
T cd05051 5 QPLNFVEKLG--------EGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRL 76 (296)
T ss_pred hhCccccccc--------CCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhc
Confidence 4699999999 9999999999876543 56899998763 2345678899999999
Q ss_pred CCCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhh-------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCcee
Q psy3914 115 RHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLK-------ENNEKKQIYISWGIFQITRALSFLINDADLRH 185 (852)
Q Consensus 115 rHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~-------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH 185 (852)
+||||+++++++..+ ...|+|||++. +|..++.+... ....+++..+..++.||+.||.||| +.+++|
T Consensus 77 ~~~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH-~~~i~H 153 (296)
T cd05051 77 SDPNIARLLGVCTVD--PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE-SLNFVH 153 (296)
T ss_pred CCCCEeEEEEEEecC--CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH-HcCccc
Confidence 999999999999987 89999999997 79988854321 1226889999999999999999999 899999
Q ss_pred cccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh--CC
Q psy3914 186 NHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN--GP 263 (852)
Q Consensus 186 ~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t--G~ 263 (852)
+||||+||+++.++.++|+|||++........ ........++..|+|||++.+..++.++|||||||++|+|++ |.
T Consensus 154 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 231 (296)
T cd05051 154 RDLATRNCLVGKNYTIKIADFGMSRNLYSSDY--YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCRE 231 (296)
T ss_pred cccchhceeecCCCceEEccccceeecccCcc--eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCC
Confidence 99999999999999999999999874422111 111112345668999999877778899999999999999998 56
Q ss_pred CCCCCCcc-------------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 264 LQSTNRKS-------------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 264 ~pf~~~~~-------------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.||..... ......+|.++.+++.+||..+|.+||++.++++.+
T Consensus 232 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L 294 (296)
T cd05051 232 QPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFL 294 (296)
T ss_pred CCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHh
Confidence 77743211 112245678999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-31 Score=278.74 Aligned_cols=235 Identities=13% Similarity=0.195 Sum_probs=193.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
.|++.+.|| .|+++.||.|... .+..|+||.+.. ......+.+|+.++++++||||+++++++... ..
T Consensus 5 ~~~~~~~lg--------~G~~~~vy~~~~~-~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 73 (256)
T cd05113 5 DLTFLKELG--------TGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQ--RP 73 (256)
T ss_pred HeEEeeEec--------CcccceEEEEEec-CCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccC--CC
Confidence 589999999 8999999999875 345699998876 33356788999999999999999999999877 78
Q ss_pred EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 134 VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 134 ~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
+|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.+||+|||++..
T Consensus 74 ~~lv~e~~~~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~ 149 (256)
T cd05113 74 IYIVTEYMSNGCLLNYLREH---GKRFQPSQLLEMCKDVCEGMAYLE-SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRY 149 (256)
T ss_pred cEEEEEcCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccccCcceEEEcCCCCEEECCCcccee
Confidence 999999997 688888432 236899999999999999999999 89999999999999999999999999999764
Q ss_pred cccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCccc------------cCcCCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKSL------------SNIDNI 278 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~l------------~~~~~i 278 (852)
..... ........++..|++||+..+..++.++|+|||||++|+|++ |..||...... ......
T Consensus 150 ~~~~~---~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (256)
T cd05113 150 VLDDE---YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLA 226 (256)
T ss_pred cCCCc---eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCC
Confidence 42211 111112234567999999977778889999999999999998 88888532211 123456
Q ss_pred ChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 279 PENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 279 p~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+..+.+++.+||+.+|.+||++.+++.++
T Consensus 227 ~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 227 SEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 78899999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=289.00 Aligned_cols=238 Identities=16% Similarity=0.211 Sum_probs=192.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeE--EEEEEEeC---CCchHHHHHHHHHHHhC-CCCCcceEeeeEE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEK--VTIFLNDS---ADTYEPALSYVKKLKTL-RHPSILTFLDSVE 127 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~--VaVKv~~~---~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e 127 (852)
.+|++.+.|| .|++|.||+|.++.++.. +++|.+.. ......+.+|+.++.++ +||||++++++++
T Consensus 7 ~~~~~~~~lg--------~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~ 78 (303)
T cd05088 7 NDIKFQDVIG--------EGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE 78 (303)
T ss_pred hhceeeeeec--------CCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC
Confidence 3589999999 899999999999887764 46666654 22345678899999999 8999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCE
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLK------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSI 193 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NI 193 (852)
++ +.+|+||||+. +|.+++.+... ....+++..+..++.||+.||.||| +.+++||||||+||
T Consensus 79 ~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH-~~gi~H~dlkp~Ni 155 (303)
T cd05088 79 HR--GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS-QKQFIHRDLAARNI 155 (303)
T ss_pred CC--CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH-hCCccccccchheE
Confidence 87 88999999997 79998854321 1235789999999999999999999 99999999999999
Q ss_pred EEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-
Q psy3914 194 FINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS- 271 (852)
Q Consensus 194 lV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~- 271 (852)
+++.++.+||+|||++....... .......+..|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 156 li~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 230 (303)
T cd05088 156 LVGENYVAKIADFGLSRGQEVYV-----KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA 230 (303)
T ss_pred EecCCCcEEeCccccCcccchhh-----hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH
Confidence 99999999999999975321100 0011123457999999877778899999999999999998 9999854321
Q ss_pred -----------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -----------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -----------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......++..+.+++.+||+.+|..||++.+++..+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l 277 (303)
T cd05088 231 ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 277 (303)
T ss_pred HHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 122345788999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=294.94 Aligned_cols=243 Identities=16% Similarity=0.204 Sum_probs=196.6
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
..+|++.+.|| .|+++.||+|.++.+|..|+||++.. ......+.+|+.+++.++||||+++++.+....
T Consensus 4 ~~~y~~~~~Lg--------~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~ 75 (342)
T cd07854 4 GSRYMDLRPLG--------CGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSG 75 (342)
T ss_pred CcceEEEEEec--------CCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccc
Confidence 35799999999 89999999999999999999999876 334566889999999999999999998776531
Q ss_pred C------------CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc
Q psy3914 131 K------------SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS 197 (852)
Q Consensus 131 ~------------~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~ 197 (852)
. ..+|+||||+. +|..++. ...+++..++.++.||+.||.||| +.|++||||||+||+++.
T Consensus 76 ~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH-~~givH~dikp~Nili~~ 149 (342)
T cd07854 76 SDLTEDVGSLTELNSVYIVQEYMETDLANVLE-----QGPLSEEHARLFMYQLLRGLKYIH-SANVLHRDLKPANVFINT 149 (342)
T ss_pred cccccccccccccceEEEEeecccccHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCHHHEEEcC
Confidence 1 35799999998 6776663 246889999999999999999999 899999999999999985
Q ss_pred -CCcEEEcccchhhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---
Q psy3914 198 -CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--- 272 (852)
Q Consensus 198 -~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--- 272 (852)
++.+||+|||++......... ........++..|+|||++ ....++.++|||||||++|+|++|..||.+....
T Consensus 150 ~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~ 228 (342)
T cd07854 150 EDLVLKIGDFGLARIVDPHYSH-KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQM 228 (342)
T ss_pred CCceEEECCcccceecCCcccc-ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 567999999998644221111 1111223467789999987 4456788999999999999999999998532110
Q ss_pred --------------------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 --------------------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 --------------------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
..+..++..+.+++++||..+|.+||++.+++.| +||
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h-----~~~ 303 (342)
T cd07854 229 QLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH-----PYM 303 (342)
T ss_pred HHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC-----Ccc
Confidence 0023567889999999999999999999999997 888
Q ss_pred c
Q psy3914 315 K 315 (852)
Q Consensus 315 ~ 315 (852)
+
T Consensus 304 ~ 304 (342)
T cd07854 304 S 304 (342)
T ss_pred c
Confidence 6
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG0579|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-32 Score=305.35 Aligned_cols=238 Identities=15% Similarity=0.206 Sum_probs=204.5
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
|+|+..+| .|.||.||+|..+.++-..|-|+++. ...++.+.-|+.+|..+.||+|+++++.|..+ +.
T Consensus 34 WeIiGELG--------DGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~e--nk 103 (1187)
T KOG0579|consen 34 WEIIGELG--------DGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFE--NK 103 (1187)
T ss_pred HHHHhhhc--------CccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc--Cc
Confidence 66677788 89999999999999998889999987 55677889999999999999999999998888 88
Q ss_pred EEEEEeecc-c-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 134 VYLAVEYVE-P-IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 134 ~yIVtE~v~-~-L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
++|..|||. . ...++- .-...+++.+|..+++|++.||.||| +.+|||||||..||+++-+|+++|+|||.+..
T Consensus 104 LwiliEFC~GGAVDaiml---EL~r~LtE~QIqvvc~q~ldALn~LH-s~~iIHRDLKAGNiL~TldGdirLADFGVSAK 179 (1187)
T KOG0579|consen 104 LWILIEFCGGGAVDAIML---ELGRVLTEDQIQVVCYQVLDALNWLH-SQNIIHRDLKAGNILLTLDGDIRLADFGVSAK 179 (1187)
T ss_pred eEEEEeecCCchHhHHHH---HhccccchHHHHHHHHHHHHHHHHHh-hcchhhhhccccceEEEecCcEeeeccccccc
Confidence 999999999 2 444432 23468999999999999999999999 99999999999999999999999999999763
Q ss_pred cccccCCCCcccccccCCCcccCCccc-----cCCCCCcchhHHhHHHHHHHHHhCCCCCCCC--------------ccc
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENS-----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNR--------------KSL 272 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~-----~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~--------------~~l 272 (852)
.. ........+.|||+|||||++ ....|++++||||||+.+.||..+.+|-..- ..+
T Consensus 180 n~----~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTL 255 (1187)
T KOG0579|consen 180 NK----STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL 255 (1187)
T ss_pred ch----hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcc
Confidence 22 122334578999999999996 5678999999999999999999998886432 233
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
-++..-+..+.+++++||..||..||++.++++| +||.|
T Consensus 256 lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H-----pfv~~ 294 (1187)
T KOG0579|consen 256 LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH-----PFVQN 294 (1187)
T ss_pred cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC-----ccccc
Confidence 4456667789999999999999999999999998 99975
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-31 Score=289.79 Aligned_cols=238 Identities=12% Similarity=0.160 Sum_probs=193.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCe----EEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE----KVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~----~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
...|++.+.|| .|+++.||+|+...+++ .|+||++... ...+.+.+|+.+++.++||||++++++
T Consensus 6 ~~~f~~~~~lg--------~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~ 77 (316)
T cd05108 6 ETEFKKIKVLG--------SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 77 (316)
T ss_pred hhhceeeeeee--------cCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 45699999999 99999999999876665 4899998752 234568889999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+... ..++|+||+. +|.+++... ...++...+..++.||+.||.||| +.+++||||||+||+++.++.+||
T Consensus 78 ~~~~---~~~~v~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH-~~~iiH~dlkp~Nill~~~~~~kl 150 (316)
T cd05108 78 CLTS---TVQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLE-ERRLVHRDLAARNVLVKTPQHVKI 150 (316)
T ss_pred EcCC---CceeeeecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHH-hcCeeccccchhheEecCCCcEEE
Confidence 8764 5789999988 688888432 246788889999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-----------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS----------- 271 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~----------- 271 (852)
+|||++........ ........++..|++||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 151 ~DfG~a~~~~~~~~--~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~ 228 (316)
T cd05108 151 TDFGLAKLLGADEK--EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 228 (316)
T ss_pred ccccccccccCCCc--ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCC
Confidence 99999875432111 111112233567999999988888999999999999999997 9999854321
Q ss_pred -ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......++..+..++.+||..+|..||++.+++.++
T Consensus 229 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l 265 (316)
T cd05108 229 RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEF 265 (316)
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 112345678899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >KOG0577|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-32 Score=303.97 Aligned_cols=238 Identities=16% Similarity=0.226 Sum_probs=201.9
Q ss_pred cccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCc
Q psy3914 45 FFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSI 119 (852)
Q Consensus 45 ~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnI 119 (852)
||..||-+- |.-.+.|| .|+||.||-|++..+.+.||||.+.. ...-+.+..|++.|++|+|||+
T Consensus 19 F~k~DPEkl--f~dLrEIG--------HGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPnt 88 (948)
T KOG0577|consen 19 FFKDDPEKL--FSDLREIG--------HGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNT 88 (948)
T ss_pred HccCCHHHH--HHHHHHhc--------CCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCc
Confidence 556665443 56678899 99999999999999999999999876 2234578999999999999999
Q ss_pred ceEeeeEEcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC
Q psy3914 120 LTFLDSVESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC 198 (852)
Q Consensus 120 lk~~d~~e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~ 198 (852)
|.|.++|..+ ...++|||||- +-.++|.- ...++.+.+|..++++.+.||.||| +.+.||||||..||++++.
T Consensus 89 ieYkgCyLre--~TaWLVMEYClGSAsDlleV---hkKplqEvEIAAi~~gaL~gLaYLH-S~~~IHRDiKAGNILLse~ 162 (948)
T KOG0577|consen 89 IEYKGCYLRE--HTAWLVMEYCLGSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLH-SHNRIHRDIKAGNILLSEP 162 (948)
T ss_pred ccccceeecc--chHHHHHHHHhccHHHHHHH---HhccchHHHHHHHHHHHHHHHHHHH-HhhHHhhhccccceEecCC
Confidence 9999999988 89999999998 55555532 1267899999999999999999999 9999999999999999999
Q ss_pred CcEEEcccchhhccccccCCCCcccccccCCCcccCCccc---cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---
Q psy3914 199 GEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENS---LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--- 272 (852)
Q Consensus 199 g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~---~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--- 272 (852)
|.+||+|||.+.... | ..+++|||.|||||++ ....|+-++||||||+...||...++|..+.+.+
T Consensus 163 g~VKLaDFGSAsi~~-----P---AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSAL 234 (948)
T KOG0577|consen 163 GLVKLADFGSASIMA-----P---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL 234 (948)
T ss_pred CeeeeccccchhhcC-----c---hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHH
Confidence 999999999987432 1 2368899999999997 5667889999999999999999998887443222
Q ss_pred ----------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 273 ----------SNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 273 ----------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
-+-+.-+..+++|+..||..-|..|||..+++.|
T Consensus 235 YHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 235 YHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred HHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 1224456789999999999999999999999998
|
|
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=277.60 Aligned_cols=239 Identities=16% Similarity=0.204 Sum_probs=197.5
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
...+|++.+.|| .|+++.||.|... ++..|+||.+.. ......+.+|+..++.++||||+++++++...
T Consensus 4 ~~~~~~i~~~ig--------~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 73 (261)
T cd05034 4 PRESLKLERKLG--------AGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEE- 73 (261)
T ss_pred chhheeeeeeec--------cCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecC-
Confidence 345699999999 8999999999976 557899999986 34456789999999999999999999999887
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
...|+||||+. +|.+++... ....++...+..++.||+.||.||| +.+++|+||+|+||+++.++.+||+|||+
T Consensus 74 -~~~~~v~e~~~~~~L~~~i~~~--~~~~~~~~~~~~~~~~i~~al~~lh-~~~i~h~di~p~nili~~~~~~~l~d~g~ 149 (261)
T cd05034 74 -EPIYIVTEYMSKGSLLDFLKSG--EGKKLRLPQLVDMAAQIAEGMAYLE-SRNYIHRDLAARNILVGENLVCKIADFGL 149 (261)
T ss_pred -CceEEEEeccCCCCHHHHHhcc--ccCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCcchheEEEcCCCCEEECcccc
Confidence 88999999997 788888432 2246889999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCccc------------cCc
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKSL------------SNI 275 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~l------------~~~ 275 (852)
+........ ........+..|+|||.+.+..++.++|+|||||++|++++ |..||.+.... ...
T Consensus 150 ~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~ 226 (261)
T cd05034 150 ARLIEDDEY---TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRP 226 (261)
T ss_pred ceeccchhh---hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 875432110 00111223457999999977778899999999999999998 89998543211 123
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
..+|..+.+++.+||..+|.+||++.++++.+
T Consensus 227 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l 258 (261)
T cd05034 227 PNCPEELYDLMLQCWDKDPEERPTFEYLQSFL 258 (261)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCHHHHHHHH
Confidence 45688999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-31 Score=285.15 Aligned_cols=242 Identities=14% Similarity=0.162 Sum_probs=196.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcC-----CCeEEEEEEEeCCC--chHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-----SNEKVTIFLNDSAD--TYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-----~g~~VaVKv~~~~~--~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
..|.+.+.|| .|+++.||.|.... ++..|++|.+.... ....+.+|+..+++++||||+++++++
T Consensus 5 ~~~~~~~~lg--------~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 76 (291)
T cd05094 5 RDIVLKRELG--------EGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVC 76 (291)
T ss_pred HHeEEeeeec--------ccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEE
Confidence 3588999999 89999999998643 45678899887622 235688999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhh------------hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCC
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTL------------KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTS 192 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~------------~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~N 192 (852)
... ...++||||+. +|.+++.... ...+.+++..+..++.||+.||.||| +.+++||||||+|
T Consensus 77 ~~~--~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH-~~~i~H~dlkp~N 153 (291)
T cd05094 77 GDG--DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA-SQHFVHRDLATRN 153 (291)
T ss_pred ccC--CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH-hCCeeecccCcce
Confidence 987 88999999997 7999985321 12245788999999999999999999 9999999999999
Q ss_pred EEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc
Q psy3914 193 IFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS 271 (852)
Q Consensus 193 IlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~ 271 (852)
|+++.++.+||+|||++........ ........++..|+|||++.+..++.++|||||||++|+|++ |..||.....
T Consensus 154 il~~~~~~~~l~dfg~a~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 231 (291)
T cd05094 154 CLVGANLLVKIGDFGMSRDVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 231 (291)
T ss_pred EEEccCCcEEECCCCcccccCCCce--eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999874322111 111122345678999999977888899999999999999998 9999843221
Q ss_pred ------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 272 ------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 272 ------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
......+|..+.+++.+||+.+|++||++.++++.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~ 280 (291)
T cd05094 232 TEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILH 280 (291)
T ss_pred HHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 1223467889999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=285.27 Aligned_cols=236 Identities=19% Similarity=0.299 Sum_probs=197.8
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
|++.+.|| .|+++.||+|....+|+.+++|.+... .....+.+|+.+++.++||||+++++++...
T Consensus 1 y~~~~~i~--------~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 70 (283)
T cd05118 1 YQKLGKIG--------EGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK-- 70 (283)
T ss_pred Cccceeee--------cCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC--
Confidence 66778888 899999999999999999999998762 2346788899999999999999999999987
Q ss_pred CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
..+|+|+||+. +|..++.. ....+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.+||+|||++.
T Consensus 71 ~~~~~v~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~LH-~~~i~H~dl~p~nili~~~~~~~l~df~~~~ 146 (283)
T cd05118 71 GDLYLVFEFMDTDLYKLIKD---RQRGLPESLIKSYLYQLLQGLAFCH-SHGILHRDLKPENLLINTEGVLKLADFGLAR 146 (283)
T ss_pred CCEEEEEeccCCCHHHHHHh---hcccCCHHHHHHHHHHHHHHHHHHH-HCCeeecCcCHHHEEECCCCcEEEeeeeeeE
Confidence 89999999998 77777743 2257899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCC-CCCcchhHHhHHHHHHHHHhCCCCCCCCcccc----------------
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSH-VTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---------------- 273 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---------------- 273 (852)
...... .......++..|+|||.+.+. .++.++|+|||||++|+|++|..||.+.+...
T Consensus 147 ~~~~~~----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (283)
T cd05118 147 SFGSPV----RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEV 222 (283)
T ss_pred ecCCCc----ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHh
Confidence 543321 112233466789999998554 78889999999999999999998885432110
Q ss_pred -------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 274 -------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 274 -------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
....++..+.+++.+||..+|.+||++.+++.| +||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~-----~~~ 283 (283)
T cd05118 223 WPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH-----PYF 283 (283)
T ss_pred cccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC-----CCC
Confidence 112467889999999999999999999999997 776
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >KOG4279|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-32 Score=305.78 Aligned_cols=230 Identities=16% Similarity=0.250 Sum_probs=196.3
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cHHHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYH 147 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~ 147 (852)
.|.||+||-|+++.+....+||.+.- ....+.+..|+...++|+|.||++|++.+-.+ +++-|.||.|+ +|..+
T Consensus 585 KGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~sen--Gf~kIFMEqVPGGSLSsL 662 (1226)
T KOG4279|consen 585 KGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSEN--GFFKIFMEQVPGGSLSSL 662 (1226)
T ss_pred cCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCC--CeEEEEeecCCCCcHHHH
Confidence 89999999999999999999998876 55667899999999999999999999999877 89999999999 79999
Q ss_pred HHhhhhcCCCC--CHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc-CCcEEEcccchhhccccccCCCCcccc
Q psy3914 148 LDNTLKENNEK--KQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS-CGEWKLGGLEYMEKISEASCIPMKRYS 224 (852)
Q Consensus 148 L~~~~~~~~~l--~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~-~g~~KL~DFg~a~~~~~~~~~~~~~~~ 224 (852)
|+... +++ .+..+.++..||++||+||| +..|||||||-+||+|+. .|.+||+|||-++.+.. - .....
T Consensus 663 LrskW---GPlKDNEstm~fYtkQILeGLkYLH-en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg--i--nP~TE 734 (1226)
T KOG4279|consen 663 LRSKW---GPLKDNESTMNFYTKQILEGLKYLH-ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG--I--NPCTE 734 (1226)
T ss_pred HHhcc---CCCccchhHHHHHHHHHHHHhhhhh-hcceeeccccCCcEEEeeccceEEecccccchhhcc--C--Ccccc
Confidence 96433 555 78889999999999999999 999999999999999986 89999999999875432 1 12223
Q ss_pred cccCCCcccCCccc--cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------cCcCCCChhHHHHHHH
Q psy3914 225 RYEDQSTYQIPENS--LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------SNIDNIPENLKRVYLE 288 (852)
Q Consensus 225 ~~~gt~~Y~APE~~--~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------~~~~~ip~~L~~li~~ 288 (852)
.+-||..|||||++ ....|+.++|||||||.+.||.||++||..-... ..+..++.+.+.+|.+
T Consensus 735 TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~Filr 814 (1226)
T KOG4279|consen 735 TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILR 814 (1226)
T ss_pred ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHH
Confidence 57799999999998 5678999999999999999999999999532221 1234455567899999
Q ss_pred hccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 289 LISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 289 lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
|+.++|..||++.++|.. +|++.
T Consensus 815 cFepd~~~R~sA~~LL~D-----pFlq~ 837 (1226)
T KOG4279|consen 815 CFEPDPCDRPSAKDLLQD-----PFLQH 837 (1226)
T ss_pred HcCCCcccCccHHHhccC-----ccccc
Confidence 999999999999999985 77654
|
|
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=278.23 Aligned_cols=237 Identities=18% Similarity=0.219 Sum_probs=195.9
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
...|++.++|| .|++|.||.|..+ +++.|+||.+.. ......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~ig--------~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--- 72 (260)
T cd05067 5 RETLKLVKKLG--------AGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQ--- 72 (260)
T ss_pred hHHceeeeeec--------cCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEcc---
Confidence 34699999999 8999999999875 678899999987 4445678999999999999999999998754
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+|++|||+. +|.+++... ....++...+..++.||+.||.||| +.+++||||+|+||+++.++.++|+|||++
T Consensus 73 ~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~al~~LH-~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 149 (260)
T cd05067 73 EPIYIITEYMENGSLVDFLKTP--EGIKLTINKLIDMAAQIAEGMAFIE-RKNYIHRDLRAANILVSETLCCKIADFGLA 149 (260)
T ss_pred CCcEEEEEcCCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHh-cCCeecccccHHhEEEcCCCCEEEccCcce
Confidence 56899999997 788887432 2346888999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcC
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNID 276 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~ 276 (852)
....... ........++..|+|||++....++.++|+|||||++|++++ |..||.+... .....
T Consensus 150 ~~~~~~~---~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 226 (260)
T cd05067 150 RLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPD 226 (260)
T ss_pred eecCCCC---cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCC
Confidence 6543211 111112334568999999977778889999999999999998 9999954321 12235
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.+|..+.+++.+||+.+|+.||++++++..+
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 257 (260)
T cd05067 227 NCPEELYELMRLCWKEKPEERPTFEYLRSVL 257 (260)
T ss_pred CCCHHHHHHHHHHccCChhhCCCHHHHHHHh
Confidence 6788999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-31 Score=283.27 Aligned_cols=241 Identities=15% Similarity=0.143 Sum_probs=195.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEc-----CCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK-----GSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k-----~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
.+|.+.+++| .|+++.||.+... .++..|++|.+.. ......+.+|++.++.++||||+++++++
T Consensus 5 ~~~~~~~~lg--------~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 76 (280)
T cd05092 5 RDIVLKWELG--------EGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVC 76 (280)
T ss_pred HhceeccccC--------CccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEE
Confidence 3578899999 8999999999753 3467899998876 23345789999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhh-----------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCE
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLK-----------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSI 193 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~-----------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NI 193 (852)
.+. ...|++|||+. +|.+++..... ....+++..+..++.||+.||.||| +.+++||||+|+||
T Consensus 77 ~~~--~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH-~~~i~H~dlkp~ni 153 (280)
T cd05092 77 TEG--RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA-SLHFVHRDLATRNC 153 (280)
T ss_pred ecC--CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH-HCCeecccccHhhE
Confidence 987 88999999997 79888853211 1135788999999999999999999 99999999999999
Q ss_pred EEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCc--
Q psy3914 194 FINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRK-- 270 (852)
Q Consensus 194 lV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~-- 270 (852)
++++++.+||+|||++....... .........+++.|+|||++.+..++.++|+|||||++|+|++ |.+||....
T Consensus 154 l~~~~~~~kL~dfg~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 231 (280)
T cd05092 154 LVGQGLVVKIGDFGMSRDIYSTD--YYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT 231 (280)
T ss_pred EEcCCCCEEECCCCceeEcCCCc--eeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH
Confidence 99999999999999986432111 0111122334568999999977788999999999999999998 888884321
Q ss_pred ----------cccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 271 ----------SLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 271 ----------~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.......+|+.+.+++.+||..+|.+||++.+++..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l 278 (280)
T cd05092 232 EAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRL 278 (280)
T ss_pred HHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence 1223457899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-31 Score=294.04 Aligned_cols=246 Identities=18% Similarity=0.256 Sum_probs=199.4
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhC-CCCCcceEeeeE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTL-RHPSILTFLDSV 126 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~ 126 (852)
...+|++.+.|| .|+++.||+|.+..+|+.|+||++.. ......+.+|+.+++.+ +||||+++++++
T Consensus 5 ~~~~y~~~~~lg--------~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~ 76 (337)
T cd07852 5 ILRKYEILQKLG--------KGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVI 76 (337)
T ss_pred hhhHHHHhHhhc--------CCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeee
Confidence 345699999999 89999999999998999999998854 22344577899999999 999999999998
Q ss_pred EcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 127 ESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
....+..+|+||||+. +|..++.. ..+++..+..++.||+.||.||| +.+++|+||+|+||+++.+|.+||+|
T Consensus 77 ~~~~~~~~~lv~e~~~~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH-~~~i~H~dl~p~nill~~~~~~kl~d 150 (337)
T cd07852 77 KAENDKDIYLVFEYMETDLHAVIRA-----NILEDVHKRYIMYQLLKALKYIH-SGNVIHRDLKPSNILLNSDCRVKLAD 150 (337)
T ss_pred ccCCCceEEEEecccccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHEEEcCCCcEEEee
Confidence 7643357999999999 68777732 26788889999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCC-CCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----------
Q psy3914 206 LEYMEKISEASCI-PMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----------- 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~-~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----------- 272 (852)
||++......... .........++..|+|||++ ....++.++|+|||||++|+|++|..||.+....
T Consensus 151 ~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~ 230 (337)
T cd07852 151 FGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIG 230 (337)
T ss_pred ccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 9998754322111 01122234678899999987 4456778999999999999999999988532211
Q ss_pred -------------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 -------------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 -------------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....++..+.+++.+||+.+|..||++.+++.| +||..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~-----~~~~~ 300 (337)
T cd07852 231 PPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH-----PYVAQ 300 (337)
T ss_pred CCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC-----hhhhh
Confidence 0123468889999999999999999999999987 66644
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-31 Score=285.52 Aligned_cols=240 Identities=14% Similarity=0.195 Sum_probs=192.5
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcC----------------CCeEEEEEEEeCC---CchHHHHHHHHHHHhCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG----------------SNEKVTIFLNDSA---DTYEPALSYVKKLKTLR 115 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~----------------~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~Lr 115 (852)
+|++.+.|| .|+++.||.+.+.. ++..|+||++... .....+.+|+.+++.++
T Consensus 6 ~~~~~~~lg--------~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~ 77 (296)
T cd05095 6 RLTFKEKLG--------EGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLK 77 (296)
T ss_pred hceeeeecc--------CCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC
Confidence 599999999 99999999986432 3457899998752 23456889999999999
Q ss_pred CCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhc-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCceec
Q psy3914 116 HPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKE-------NNEKKQIYISWGIFQITRALSFLINDADLRHN 186 (852)
Q Consensus 116 HPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~-------~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~ 186 (852)
||||+++++++... ...|+||||+. +|.+++.+.... ...++...+..++.||+.||.||| +.+++||
T Consensus 78 ~~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH-~~~i~H~ 154 (296)
T cd05095 78 DPNIIRLLAVCITS--DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS-SLNFVHR 154 (296)
T ss_pred CCCcceEEEEEecC--CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH-HCCeecc
Confidence 99999999999987 88999999997 798888542211 124677889999999999999999 8999999
Q ss_pred ccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh--CCC
Q psy3914 187 HVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN--GPL 264 (852)
Q Consensus 187 DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t--G~~ 264 (852)
||||+||+++.++.++|+|||++..+..... ........++..|++||+.....++.++|+|||||++|||++ |..
T Consensus 155 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~ 232 (296)
T cd05095 155 DLATRNCLVGKNYTIKIADFGMSRNLYSGDY--YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQ 232 (296)
T ss_pred cCChheEEEcCCCCEEeccCcccccccCCcc--eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999875422111 111112233568999999866778899999999999999998 677
Q ss_pred CCCCCcc-------------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 265 QSTNRKS-------------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 265 pf~~~~~-------------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
||..... ......+|+.+.+++.+||..||..||++.++++.+
T Consensus 233 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l 294 (296)
T cd05095 233 PYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATL 294 (296)
T ss_pred CccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHH
Confidence 8743211 112346788999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=279.74 Aligned_cols=233 Identities=19% Similarity=0.257 Sum_probs=193.4
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PI 144 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L 144 (852)
.|+++.||.+++..+|+.|+||++... .....+.+|+++++.++||||+++++.++.. ...|+|+||+. +|
T Consensus 3 ~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L 80 (265)
T cd05579 3 KGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGK--KNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecC--cEEEEEEecCCCCcH
Confidence 789999999999999999999999762 3456789999999999999999999999877 89999999997 78
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCC----CC
Q psy3914 145 FYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCI----PM 220 (852)
Q Consensus 145 ~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~----~~ 220 (852)
.+++.+. +.+++..+..++.||+.||.||| +.+++||||+|+||+++.++.++|+|||++......... ..
T Consensus 81 ~~~l~~~----~~~~~~~~~~i~~qi~~~L~~lH-~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENV----GSLDEDVARIYIAEIVLALEYLH-SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH-HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 8888432 47899999999999999999999 899999999999999999999999999997643211100 00
Q ss_pred cccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCc--CCCChhHHHHHH
Q psy3914 221 KRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNI--DNIPENLKRVYL 287 (852)
Q Consensus 221 ~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~--~~ip~~L~~li~ 287 (852)
.......++..|++||......++.++|+|||||++|++++|..||..... .... ..++..+.++++
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 235 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLIS 235 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHH
Confidence 112234567789999999766788899999999999999999999853321 1111 234899999999
Q ss_pred HhccCCCCCCCCH---HHHHHhhcCCCCCCcc
Q psy3914 288 ELISERPNQRPNP---ADFIMRNRKPGGYFKN 316 (852)
Q Consensus 288 ~lL~~nP~~Rps~---~elL~~l~~~~~fF~n 316 (852)
+||+.+|..||++ .++++| +||++
T Consensus 236 ~~l~~~p~~Rpt~~~~~~~l~~-----~~~~~ 262 (265)
T cd05579 236 KLLVPDPEKRLGAKSIEEIKNH-----PFFKG 262 (265)
T ss_pred HHhcCCHhhcCCCccHHHHhcC-----ccccC
Confidence 9999999999999 888886 89864
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-31 Score=286.39 Aligned_cols=242 Identities=14% Similarity=0.259 Sum_probs=196.1
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEc-------CCCeEEEEEEEeC---CCchHHHHHHHHHHHhC-CCCCcce
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK-------GSNEKVTIFLNDS---ADTYEPALSYVKKLKTL-RHPSILT 121 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k-------~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~L-rHPnIlk 121 (852)
..+|++++.|| .|++|.||.|+.. .++..|++|++.. ......+.+|+..++.+ +||||++
T Consensus 14 ~~~~~~~~~lg--------~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~ 85 (304)
T cd05101 14 RDKLTLGKPLG--------EGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 85 (304)
T ss_pred HHHeeecceee--------ccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchh
Confidence 45699999999 8999999999753 2345799998875 23345788999999999 8999999
Q ss_pred EeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecc
Q psy3914 122 FLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLK------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNH 187 (852)
Q Consensus 122 ~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~D 187 (852)
+++.+... ..+|+||||+. +|.+++.+... ....++...+..++.||+.||.||| +.|++|||
T Consensus 86 ~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH-~~givH~d 162 (304)
T cd05101 86 LLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA-SQKCIHRD 162 (304)
T ss_pred eeEEEecC--CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH-HCCeeecc
Confidence 99999987 88999999998 79999854321 1235778889999999999999999 89999999
Q ss_pred cCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCC
Q psy3914 188 VNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQS 266 (852)
Q Consensus 188 Ikp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf 266 (852)
|||+||+++.++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|+|++ |..||
T Consensus 163 lkp~Nili~~~~~~kl~D~g~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~ 240 (304)
T cd05101 163 LAARNVLVTENNVMKIADFGLARDVNNIDYY--KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 240 (304)
T ss_pred cccceEEEcCCCcEEECCCccceeccccccc--ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCc
Confidence 9999999999999999999998754322111 11112334568999999977788899999999999999998 67777
Q ss_pred CCCcc------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 267 TNRKS------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 267 ~~~~~------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.+... ......++..+..++.+||..+|..||++.++++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l 293 (304)
T cd05101 241 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDL 293 (304)
T ss_pred ccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHH
Confidence 43311 122356788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-31 Score=284.25 Aligned_cols=239 Identities=14% Similarity=0.164 Sum_probs=194.0
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEE----cCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKK----KGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~----k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
|++.+.|| .|+++.||.+.. +.++..|+||.+.. ......+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~lg--------~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 77 (284)
T cd05079 6 LKRIRDLG--------EGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE 77 (284)
T ss_pred hhhceecC--------CCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEec
Confidence 78899999 999999999974 45788999999875 2334578899999999999999999999887
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
......|+||||+. +|.+++.+. ...++...+..++.||+.||.||| +.+++||||||+||+++.+|.+||+||
T Consensus 78 ~~~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~~i~~aL~~lH-~~gi~H~dlkp~Nil~~~~~~~~l~df 153 (284)
T cd05079 78 DGGNGIKLIMEFLPSGSLKEYLPRN---KNKINLKQQLKYAVQICKGMDYLG-SRQYVHRDLAARNVLVESEHQVKIGDF 153 (284)
T ss_pred CCCCceEEEEEccCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecccchheEEEcCCCCEEECCC
Confidence 54467999999997 798888432 235789999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCC-----------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNR----------------- 269 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~----------------- 269 (852)
|++..+..... .........++..|+|||++.+..++.++|||||||++|+|+++..|+...
T Consensus 154 g~~~~~~~~~~-~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd05079 154 GLTKAIETDKE-YYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTV 232 (284)
T ss_pred ccccccccCcc-ceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccH
Confidence 99875432111 011112344566899999987777888999999999999999976543110
Q ss_pred ----------ccccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 270 ----------KSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 270 ----------~~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
........++..+.+++.+||+.+|.+||++.++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 280 (284)
T cd05079 233 TRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGF 280 (284)
T ss_pred HHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence 00112346788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=293.14 Aligned_cols=244 Identities=17% Similarity=0.218 Sum_probs=197.7
Q ss_pred CCee-EeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCc----------------hHHHHHHHHHHHhCCC
Q psy3914 54 FAYE-VGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADT----------------YEPALSYVKKLKTLRH 116 (852)
Q Consensus 54 ~~Y~-i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~----------------~~~~~~E~~~Lk~LrH 116 (852)
.+|. +.+.|| .|++++||+|.++.+++.|+||++..... ...+.+|++++++++|
T Consensus 8 ~ry~~~~~~ig--------~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 79 (335)
T PTZ00024 8 ERYIQKGAHLG--------EGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH 79 (335)
T ss_pred cchhhhhhccc--------CCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC
Confidence 4575 467798 89999999999999999999999876211 1146789999999999
Q ss_pred CCcceEeeeEEcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE
Q psy3914 117 PSILTFLDSVESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI 195 (852)
Q Consensus 117 PnIlk~~d~~e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV 195 (852)
|||+++++++... ...|+||||+. +|.+++. ....+++..+..++.||+.||.||| +.+++||||+|+||++
T Consensus 80 ~~iv~~~~~~~~~--~~~~lv~e~~~~~l~~~l~----~~~~~~~~~~~~~~~ql~~aL~~LH-~~~i~H~dl~~~nill 152 (335)
T PTZ00024 80 ENIMGLVDVYVEG--DFINLVMDIMASDLKKVVD----RKIRLTESQVKCILLQILNGLNVLH-KWYFMHRDLSPANIFI 152 (335)
T ss_pred cceeeeeEEEecC--CcEEEEEeccccCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH-hCCeecccccHHHeEE
Confidence 9999999999987 89999999998 7877773 2356899999999999999999999 8999999999999999
Q ss_pred ccCCcEEEcccchhhccccccC----------CCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCC
Q psy3914 196 NSCGEWKLGGLEYMEKISEASC----------IPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPL 264 (852)
Q Consensus 196 ~~~g~~KL~DFg~a~~~~~~~~----------~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~ 264 (852)
+.+|.+||+|||++........ ..........++..|+|||.+.+ ..++.++|+|||||++|+|++|..
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~ 232 (335)
T PTZ00024 153 NSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKP 232 (335)
T ss_pred CCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999875431100 00111122345778999999843 456889999999999999999999
Q ss_pred CCCCCcccc---------------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHH
Q psy3914 265 QSTNRKSLS---------------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIM 305 (852)
Q Consensus 265 pf~~~~~l~---------------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~ 305 (852)
||.+..... .....+..+.+++.+||+.+|.+||++.+++.
T Consensus 233 p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 233 LFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred CCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 885432110 01345778899999999999999999999999
Q ss_pred hhcCCCCCCcch
Q psy3914 306 RNRKPGGYFKND 317 (852)
Q Consensus 306 ~l~~~~~fF~n~ 317 (852)
| +||+..
T Consensus 313 ~-----~~~~~~ 319 (335)
T PTZ00024 313 H-----EYFKSD 319 (335)
T ss_pred C-----cccCCC
Confidence 7 898754
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-31 Score=317.49 Aligned_cols=239 Identities=15% Similarity=0.169 Sum_probs=195.0
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.+|++++.|| .|++|.||+|++..+|+.|+||++... .....+.+|+++++.++||||+++++++.+
T Consensus 2 grYeIi~~LG--------kGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d 73 (932)
T PRK13184 2 QRYDIIRLIG--------KGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD 73 (932)
T ss_pred CCeEEEEEEe--------cCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee
Confidence 3699999999 999999999999999999999998751 123467889999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhc-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKE-------NNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG 199 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~-------~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g 199 (852)
. +..|+||||+. +|.+++...... ...++...+..++.||+.||.||| +.+++||||||+||+++.+|
T Consensus 74 ~--~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH-s~GIIHRDLKPeNILLd~dg 150 (932)
T PRK13184 74 G--DPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH-SKGVLHRDLKPDNILLGLFG 150 (932)
T ss_pred C--CEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH-HCCccccCCchheEEEcCCC
Confidence 7 89999999998 799888532211 123456678889999999999999 89999999999999999999
Q ss_pred cEEEcccchhhccccccC--------------CCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCC
Q psy3914 200 EWKLGGLEYMEKISEASC--------------IPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQ 265 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~--------------~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~p 265 (852)
.+||+|||++........ ..........||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus 151 ~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~P 230 (932)
T PRK13184 151 EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP 230 (932)
T ss_pred CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence 999999999875421100 001111235689999999999888889999999999999999999999
Q ss_pred CCCCccc--------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHH
Q psy3914 266 STNRKSL--------------SNIDNIPENLKRVYLELISERPNQRPNPADF 303 (852)
Q Consensus 266 f~~~~~l--------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~el 303 (852)
|.+.... .....+|+.+.+++.+||..||++|++..+.
T Consensus 231 F~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~ee 282 (932)
T PRK13184 231 YRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQE 282 (932)
T ss_pred CCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 9543211 1124688999999999999999999865443
|
|
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-31 Score=285.23 Aligned_cols=237 Identities=14% Similarity=0.205 Sum_probs=192.5
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCe--EEEEEEEeC---CCchHHHHHHHHHHHhC-CCCCcceEeeeEEc
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE--KVTIFLNDS---ADTYEPALSYVKKLKTL-RHPSILTFLDSVES 128 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~--~VaVKv~~~---~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~ 128 (852)
+|++.+.|| .|++|.||+|..+.++. .+++|.+.. ....+.+.+|+.++.++ +||||+++++++..
T Consensus 3 ~~~~~~~lg--------~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 74 (297)
T cd05089 3 DIKFEDVIG--------EGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACEN 74 (297)
T ss_pred cceeeeeec--------CCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc
Confidence 489999999 99999999999987775 468887764 22345678899999999 79999999999988
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEE
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLK------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIF 194 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIl 194 (852)
. ..+|+|+||+. +|.+++..... ....++...+..++.||+.||.||| +.+++||||||+||+
T Consensus 75 ~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH-~~~ivH~dlkp~Nil 151 (297)
T cd05089 75 R--GYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS-EKQFIHRDLAARNVL 151 (297)
T ss_pred C--CcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCcCCcceEE
Confidence 7 88999999997 79888854211 1135888999999999999999999 899999999999999
Q ss_pred EccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc--
Q psy3914 195 INSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS-- 271 (852)
Q Consensus 195 V~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~-- 271 (852)
++.++.+||+|||++....... . ......+..|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 152 l~~~~~~kl~dfg~~~~~~~~~----~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~ 226 (297)
T cd05089 152 VGENLASKIADFGLSRGEEVYV----K-KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE 226 (297)
T ss_pred ECCCCeEEECCcCCCcccccee----c-cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 9999999999999976321110 0 001122347999999977778899999999999999997 9999854321
Q ss_pred ----------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 ----------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 ----------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......++..+.+++.+||..+|.+||++.++++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l 272 (297)
T cd05089 227 LYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQL 272 (297)
T ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 112346788999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=283.14 Aligned_cols=250 Identities=14% Similarity=0.165 Sum_probs=197.1
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcC-----CCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEee
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-----SNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLD 124 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-----~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d 124 (852)
..+|++.+.|| .|+++.||+|..+. .+..|+||.+.... ....+.+|+..++.++||||+++++
T Consensus 5 ~~~~~i~~~lg--------~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 76 (288)
T cd05061 5 REKITLLRELG--------QGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLG 76 (288)
T ss_pred HHHceeeeeec--------CCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEE
Confidence 35699999999 89999999997653 35689999887522 2335678999999999999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhhc------CCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEc
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLKE------NNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN 196 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~------~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~ 196 (852)
++.+. ...|+||||+. +|.+++.+.... ....+...+..++.||+.||.||| +.+++||||||+||+++
T Consensus 77 ~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH-~~~i~H~dikp~nili~ 153 (288)
T cd05061 77 VVSKG--QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN-AKKFVHRDLAARNCMVA 153 (288)
T ss_pred EEcCC--CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCcCCCCChheEEEc
Confidence 99877 88999999997 799998542211 123466788899999999999999 99999999999999999
Q ss_pred cCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc----
Q psy3914 197 SCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS---- 271 (852)
Q Consensus 197 ~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~---- 271 (852)
.++.+||+|||+++....... ........++..|+|||.+.+..++.++|+|||||++|||++ |..||.+...
T Consensus 154 ~~~~~~L~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~ 231 (288)
T cd05061 154 HDFTVKIGDFGMTRDIYETDY--YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 231 (288)
T ss_pred CCCcEEECcCCcccccccccc--ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 999999999999874322111 111112234567999999977778899999999999999998 6888854321
Q ss_pred --------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcC-CCCCCc
Q psy3914 272 --------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRK-PGGYFK 315 (852)
Q Consensus 272 --------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~-~~~fF~ 315 (852)
......+|+.+.+++.+||+.+|++||++.++++.++. .+++|.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~ 284 (288)
T cd05061 232 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 284 (288)
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCC
Confidence 12234678899999999999999999999999987643 234543
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=295.60 Aligned_cols=236 Identities=15% Similarity=0.217 Sum_probs=194.2
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|.+.+.|| .|++|.||+|+++.+|+.|+||++.. ......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~y~~~~~ig--------~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 86 (342)
T cd07879 15 ERYTSLKQVG--------SGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSA 86 (342)
T ss_pred cceEEEEEee--------ecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheeccc
Confidence 3599999999 89999999999999999999999875 22344678999999999999999999998754
Q ss_pred C----CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 130 S----KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 130 ~----~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
. ...+|+|+||+. .|..++ ...+++..+.+++.||+.||.||| +.+++||||+|+||+++.+|.+||+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~l~~~~------~~~~~~~~~~~~~~qi~~aL~~LH-~~~i~H~dlkp~NIll~~~~~~kL~ 159 (342)
T cd07879 87 VSGDEFQDFYLVMPYMQTDLQKIM------GHPLSEDKVQYLVYQMLCGLKYIH-SAGIIHRDLKPGNLAVNEDCELKIL 159 (342)
T ss_pred ccCCCCceEEEEecccccCHHHHH------cCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEECCCCCEEEe
Confidence 1 135799999998 455544 146889999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc----------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---------- 273 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---------- 273 (852)
|||++...... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||.+.....
T Consensus 160 dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~ 232 (342)
T cd07879 160 DFGLARHADAE-------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTG 232 (342)
T ss_pred eCCCCcCCCCC-------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 99998643211 112345778999999844 567889999999999999999999996543110
Q ss_pred --------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 --------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 --------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++.+||+.||.+||++.+++.| +||..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h-----~~f~~ 302 (342)
T cd07879 233 VPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH-----PYFDS 302 (342)
T ss_pred CCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC-----cchhh
Confidence 012456778999999999999999999999997 88754
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-31 Score=284.56 Aligned_cols=240 Identities=17% Similarity=0.281 Sum_probs=194.5
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcC-----CCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-----SNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-----~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
+|++.+.|| .|+++.||+|+... ....|++|.+.... ....+.+|+.+++.++||||+++++.+
T Consensus 1 ~~~~~~~lg--------~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 72 (290)
T cd05045 1 NLVLGKTLG--------EGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGAC 72 (290)
T ss_pred Ccccccccc--------CcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEE
Confidence 378889999 89999999998753 23578899887622 245688999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhh--------------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCce
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLK--------------------ENNEKKQIYISWGIFQITRALSFLINDADLR 184 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~--------------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~iv 184 (852)
..+ +..|+|+||+. +|.+++..... ....++...+..++.||+.||.||| +.+++
T Consensus 73 ~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~iv 149 (290)
T cd05045 73 SQD--GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA-EMKLV 149 (290)
T ss_pred ecC--CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH-HCCee
Confidence 887 88999999998 79888853211 1235788899999999999999999 99999
Q ss_pred ecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CC
Q psy3914 185 HNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GP 263 (852)
Q Consensus 185 H~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~ 263 (852)
||||+|+||+++.++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|+|++ |.
T Consensus 150 H~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~ 227 (290)
T cd05045 150 HRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSY--VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 227 (290)
T ss_pred hhhhhhheEEEcCCCcEEeccccccccccCccch--hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999998743221111 11112234568999999877788899999999999999998 99
Q ss_pred CCCCCCcc------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 264 LQSTNRKS------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 264 ~pf~~~~~------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.||.+... ......++..+..++.+||+.+|.+||++.++++.+
T Consensus 228 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l 283 (290)
T cd05045 228 NPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKEL 283 (290)
T ss_pred CCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHH
Confidence 88854321 122456788999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-31 Score=287.28 Aligned_cols=236 Identities=16% Similarity=0.223 Sum_probs=197.2
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
..|++.+.+| .|++++||.|+...+|+.|+||++... .....+.+|+.+++.++||||+++++++.+
T Consensus 15 ~~y~~~~~lg--------~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~ 86 (307)
T cd06607 15 KLFTDLREIG--------HGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR 86 (307)
T ss_pred hhhhhheeec--------CCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe
Confidence 3489999999 899999999999999999999998751 223467899999999999999999999998
Q ss_pred CCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 129 PSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 129 ~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
. ...|+||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.+||+|||
T Consensus 87 ~--~~~~lv~e~~~g~l~~~~~~---~~~~l~~~~~~~~~~ql~~~L~~LH-~~~i~H~dl~p~nIl~~~~~~~kL~dfg 160 (307)
T cd06607 87 E--HTAWLVMEYCLGSASDILEV---HKKPLQEVEIAAICHGALQGLAYLH-SHERIHRDIKAGNILLTEPGTVKLADFG 160 (307)
T ss_pred C--CeEEEEHHhhCCCHHHHHHH---cccCCCHHHHHHHHHHHHHHHHHHH-HCCceecCCCcccEEECCCCCEEEeecC
Confidence 7 88999999998 67776632 2246899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCcccc---CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-----------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSL---SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS----------- 273 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~----------- 273 (852)
++...... ....++..|+|||++. ...++.++|+|||||++|+|++|..||.+.....
T Consensus 161 ~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 232 (307)
T cd06607 161 SASLVSPA--------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSP 232 (307)
T ss_pred cceecCCC--------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCC
Confidence 97633211 1234667899999973 4557789999999999999999999985432111
Q ss_pred --CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 --NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 --~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....++..+.+++.+||+.+|..||++.+++.| +||..
T Consensus 233 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~-----~~~~~ 272 (307)
T cd06607 233 TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH-----RFVLR 272 (307)
T ss_pred CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC-----hhhcc
Confidence 123467789999999999999999999999997 77754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=285.56 Aligned_cols=241 Identities=15% Similarity=0.179 Sum_probs=192.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCC--------------eEEEEEEEeCC---CchHHHHHHHHHHHhCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN--------------EKVTIFLNDSA---DTYEPALSYVKKLKTLRH 116 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g--------------~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrH 116 (852)
.+|++.+.|| .|+++.||.+++..++ ..|+||.+... .....+.+|++++++++|
T Consensus 5 ~~~~~~~~lg--------~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h 76 (295)
T cd05097 5 QQLRLKEKLG--------EGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKN 76 (295)
T ss_pred HhCeehhccC--------CCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 4699999999 9999999999876432 35899988762 223467899999999999
Q ss_pred CCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhh--------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceec
Q psy3914 117 PSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLK--------ENNEKKQIYISWGIFQITRALSFLINDADLRHN 186 (852)
Q Consensus 117 PnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~--------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~ 186 (852)
|||+++++++... ...|+||||+. +|.+++..... ....++...+..++.||+.||.||| +.+++||
T Consensus 77 ~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH-~~~i~H~ 153 (295)
T cd05097 77 PNIIRLLGVCVSD--DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA-SLNFVHR 153 (295)
T ss_pred CCcCeEEEEEcCC--CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH-hcCeecc
Confidence 9999999999887 88999999998 79888843211 1123678889999999999999999 8999999
Q ss_pred ccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh--CCC
Q psy3914 187 HVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN--GPL 264 (852)
Q Consensus 187 DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t--G~~ 264 (852)
||||+||+++.++.+||+|||++....... .........++..|+|||+..+..++.++|+|||||++|+|++ |..
T Consensus 154 dlkp~Nill~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~ 231 (295)
T cd05097 154 DLATRNCLVGNHYTIKIADFGMSRNLYSGD--YYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQ 231 (295)
T ss_pred ccChhhEEEcCCCcEEecccccccccccCc--ceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999987432211 1111122334568999999877778999999999999999998 566
Q ss_pred CCCCCcc-------------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 265 QSTNRKS-------------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 265 pf~~~~~-------------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
||..... ......+|+.+.+++.+|+..+|.+||++.++++.+
T Consensus 232 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l 293 (295)
T cd05097 232 PYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFL 293 (295)
T ss_pred CCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 7743211 111345788999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=277.55 Aligned_cols=238 Identities=14% Similarity=0.183 Sum_probs=197.1
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-------CCchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-------ADTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-------~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
.+|++++.|| .|+++.||+|+++.++..|++|++.. ......+++|+.+++.++||||+++++.+
T Consensus 2 ~~~~~~~~lg--------~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~ 73 (264)
T cd06653 2 VNWRLGKLLG--------RGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCL 73 (264)
T ss_pred CceeeeeeEc--------cCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEE
Confidence 3699999999 89999999999999999999998754 12335788999999999999999999998
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
.+.....+|+++||+. +|.+++.. .+.+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+
T Consensus 74 ~~~~~~~~~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~al~~LH-~~~i~H~dl~p~ni~i~~~~~~~l~ 148 (264)
T cd06653 74 RDPEEKKLSIFVEYMPGGSIKDQLKA----YGALTENVTRRYTRQILQGVSYLH-SNMIVHRDIKGANILRDSAGNVKLG 148 (264)
T ss_pred EcCCCCEEEEEEEeCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-hCCEecCCCCHHHEEEcCCCCEEEC
Confidence 7654467999999997 68888742 245788999999999999999999 9999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS------------- 271 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------------- 271 (852)
|||++........ .........++..|+|||++.+..++.++|+|||||++|+|++|..||.+...
T Consensus 149 dfg~~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 227 (264)
T cd06653 149 DFGASKRIQTICM-SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTK 227 (264)
T ss_pred ccccccccccccc-cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCC
Confidence 9999875432111 01111234577899999999777788899999999999999999999954321
Q ss_pred ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 272 LSNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 272 l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
...+..+++.+.+++.+||. +|..||++.+++.|
T Consensus 228 ~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 228 PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 12245677889999999998 57999999999987
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-31 Score=286.33 Aligned_cols=243 Identities=16% Similarity=0.271 Sum_probs=195.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcC-------CCeEEEEEEEeCC---CchHHHHHHHHHHHhC-CCCCcce
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-------SNEKVTIFLNDSA---DTYEPALSYVKKLKTL-RHPSILT 121 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-------~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~L-rHPnIlk 121 (852)
..+|.+++.|| .|+++.||.|.... ++..|++|.+... .....+.+|+.+++.+ +||||++
T Consensus 17 ~~~~~i~~~lg--------~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~ 88 (307)
T cd05098 17 RDRLVLGKPLG--------EGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 88 (307)
T ss_pred hHHeEEeeeec--------cCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEee
Confidence 34699999999 99999999998643 2357999998762 2334678899999999 7999999
Q ss_pred EeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecc
Q psy3914 122 FLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLK------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNH 187 (852)
Q Consensus 122 ~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~D 187 (852)
+++++... ..+|+||||+. +|.+++..... ....++...+..++.||+.||.||| +.+++|||
T Consensus 89 ~~~~~~~~--~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH-~~gi~H~d 165 (307)
T cd05098 89 LLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA-SKKCIHRD 165 (307)
T ss_pred EEEEEecC--CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH-HCCccccc
Confidence 99999987 88999999998 79999854321 1235788899999999999999999 89999999
Q ss_pred cCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCC
Q psy3914 188 VNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQS 266 (852)
Q Consensus 188 Ikp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf 266 (852)
|||+||+++.++.+||+|||++........ ........++..|+|||++.+..++.++|+|||||++|+|++ |..||
T Consensus 166 lkp~Nill~~~~~~kL~dfg~a~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~ 243 (307)
T cd05098 166 LAARNVLVTEDNVMKIADFGLARDIHHIDY--YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 243 (307)
T ss_pred ccHHheEEcCCCcEEECCCcccccccccch--hhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999999874432110 011111223457999999977788899999999999999998 78887
Q ss_pred CCCcc------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 267 TNRKS------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 267 ~~~~~------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
.+... ......++..+.+++.+||..+|..||++.++++.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~ 297 (307)
T cd05098 244 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 297 (307)
T ss_pred CcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 54321 1223567889999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=275.95 Aligned_cols=233 Identities=15% Similarity=0.242 Sum_probs=195.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC-chHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD-TYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~-~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
..|++.+.|| .|+++.||.|.. .|+.|+||.+.... ....+.+|+.+++.++||||+++++.+.+. .
T Consensus 6 ~~~~~~~~ig--------~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~ 73 (256)
T cd05039 6 KELKLGATIG--------KGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQG--N 73 (256)
T ss_pred hhccceeeee--------cCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCC--C
Confidence 4588999999 899999999987 48899999998743 356788999999999999999999999876 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
..|+||||+. +|.+++... ....+++..+..++.|++.||.||| ..+++|+||+|+||+++.+|.+||+|||++.
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lh-~~~i~H~di~p~Nili~~~~~~~l~d~g~~~ 150 (256)
T cd05039 74 PLYIVTEYMAKGSLVDYLRSR--GRAVITLAQQLGFALDVCEGMEYLE-EKNFVHRDLAARNVLVSEDLVAKVSDFGLAK 150 (256)
T ss_pred CeEEEEEecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH-hCCccchhcccceEEEeCCCCEEEccccccc
Confidence 8999999998 798888432 1236899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDN 277 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~ 277 (852)
....... ....+..|+|||++....++.++|+|||||++|++++ |..||..... ......
T Consensus 151 ~~~~~~~-------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 223 (256)
T cd05039 151 EASQGQD-------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEG 223 (256)
T ss_pred ccccccc-------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccC
Confidence 5422111 1223447999999877778889999999999999997 8888853311 122346
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
+|+.+.+++.+||..+|.+||++.++++.+.
T Consensus 224 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 254 (256)
T cd05039 224 CPPEVYKVMKDCWELDPAKRPTFKQLREQLA 254 (256)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHHHHh
Confidence 7899999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=276.99 Aligned_cols=228 Identities=15% Similarity=0.225 Sum_probs=187.3
Q ss_pred cCCceEEEEEEEcCCC---eEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGSN---EKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g---~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|++|.||+|+....+ ..|++|.+.... ....+.+|+++++.+.||||++++++++. ...++||||+. +
T Consensus 5 ~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~~~~~~ 81 (257)
T cd05060 5 HGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG---EPLMLVMELAPLGP 81 (257)
T ss_pred ccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC---CceEEEEEeCCCCc
Confidence 8999999999876555 789999988732 34568899999999999999999998764 46899999987 7
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|.+++.+ ...+++..+..++.||+.||.||| +.+++|+||||+||+++.++.+||+|||+++........ ....
T Consensus 82 L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lh-~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~-~~~~ 155 (257)
T cd05060 82 LLKYLKK----RREIPVSDLKELAHQVAMGMAYLE-SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY-YRAT 155 (257)
T ss_pred HHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHh-hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc-cccc
Confidence 8888843 246899999999999999999999 899999999999999999999999999998755332111 1111
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCCCChhHHHHHHHhc
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDNIPENLKRVYLELI 290 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~ip~~L~~li~~lL 290 (852)
....++..|+|||.+.+..++.++|+|||||++|+|++ |..||..... ......+|..+.+++.+||
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 235 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCW 235 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHh
Confidence 11223457999999977788999999999999999998 8999854321 2234567889999999999
Q ss_pred cCCCCCCCCHHHHHHhhc
Q psy3914 291 SERPNQRPNPADFIMRNR 308 (852)
Q Consensus 291 ~~nP~~Rps~~elL~~l~ 308 (852)
..+|.+||++.++++.++
T Consensus 236 ~~~p~~Rp~~~~l~~~l~ 253 (257)
T cd05060 236 KYRPEDRPTFSELESTFR 253 (257)
T ss_pred cCChhhCcCHHHHHHHHH
Confidence 999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=278.58 Aligned_cols=228 Identities=16% Similarity=0.221 Sum_probs=188.3
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCC--CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cHHHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSA--DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYH 147 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~ 147 (852)
.|+++.||+|+++.++..|++|.+... ...+.+.+|+.+++.++||||+++++++... ..+|+|+||+. +|.++
T Consensus 18 ~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~ 95 (268)
T cd06624 18 KGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSEN--GFFKIFMEQVPGGSLSAL 95 (268)
T ss_pred cCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccC--CEEEEEEecCCCCCHHHH
Confidence 899999999999999999999998762 2445788999999999999999999999987 89999999997 79988
Q ss_pred HHhhhhcCCCC--CHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc-CCcEEEcccchhhccccccCCCCcccc
Q psy3914 148 LDNTLKENNEK--KQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS-CGEWKLGGLEYMEKISEASCIPMKRYS 224 (852)
Q Consensus 148 L~~~~~~~~~l--~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~-~g~~KL~DFg~a~~~~~~~~~~~~~~~ 224 (852)
+.... ..+ ++..+..++.||+.||.||| ..+++||||+|+||+++. .+.++|+|||++..+..... ...
T Consensus 96 l~~~~---~~~~~~~~~~~~~~~qi~~al~~lH-~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~----~~~ 167 (268)
T cd06624 96 LRSKW---GPLKDNEQTIIFYTKQILEGLKYLH-DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP----CTE 167 (268)
T ss_pred HHHhc---ccCCCcHHHHHHHHHHHHHHHHHHH-HCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC----ccc
Confidence 85321 234 78888899999999999999 899999999999999986 67999999999864422111 111
Q ss_pred cccCCCcccCCccccC--CCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------ccCcCCCChhHHHHHHH
Q psy3914 225 RYEDQSTYQIPENSLS--HVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------LSNIDNIPENLKRVYLE 288 (852)
Q Consensus 225 ~~~gt~~Y~APE~~~~--~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------l~~~~~ip~~L~~li~~ 288 (852)
...++..|+|||++.+ ..++.++|+||||+++|+|++|..||..... ......+++.+.+++++
T Consensus 168 ~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 247 (268)
T cd06624 168 TFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILR 247 (268)
T ss_pred cCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHH
Confidence 2346779999999843 3477899999999999999999999853211 01124567789999999
Q ss_pred hccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 289 LISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 289 lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
||+.+|.+||++.+++.| +||
T Consensus 248 ~l~~~p~~Rpt~~~ll~~-----~~~ 268 (268)
T cd06624 248 CFEPDPDKRASAHDLLQD-----PFL 268 (268)
T ss_pred HcCCCchhCCCHHHHHhC-----CCC
Confidence 999999999999999997 776
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >KOG0586|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=298.35 Aligned_cols=239 Identities=16% Similarity=0.228 Sum_probs=206.7
Q ss_pred CCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEee
Q psy3914 49 DASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLD 124 (852)
Q Consensus 49 ~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d 124 (852)
++..-..|.+.+.|| .|.|+.|..|++..++..||||++++ ....+.+.+|+++|+.|+||||++++.
T Consensus 51 ~~~~vg~y~i~~tig--------~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~ 122 (596)
T KOG0586|consen 51 DSNSVGLYVIIKTIG--------KGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFS 122 (596)
T ss_pred ccccccceeeeeeec--------cceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeee
Confidence 344455699999999 99999999999999999999999998 233455889999999999999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
+++.. ..+|+||||+. .++++|.+ .+.+.+.++...+.|++.|++||| +.+|||||||.+||+++.+-++|
T Consensus 123 v~~t~--~~lylV~eya~~ge~~~yl~~----~gr~~e~~ar~~F~q~vsaveYcH-~k~ivHrdLk~eNilL~~~mnik 195 (596)
T KOG0586|consen 123 VIETE--ATLYLVMEYASGGELFDYLVK----HGRMKEKEARAKFRQIVSAVEYCH-SKNIVHRDLKAENILLDENMNIK 195 (596)
T ss_pred eeeec--ceeEEEEEeccCchhHHHHHh----cccchhhhhhhhhHHHHHHHHHHh-hcceeccccchhhccccccccee
Confidence 99988 99999999998 58888843 467778899999999999999999 99999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc--------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS-------- 273 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~-------- 273 (852)
|+|||++..+.. .....+.+|++.|+|||++.+ ...++.+|+|+||+++|.|+.|.+||.|.....
T Consensus 196 IaDfgfS~~~~~-----~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~g 270 (596)
T KOG0586|consen 196 IADFGFSTFFDY-----GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRG 270 (596)
T ss_pred eeccccceeecc-----cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheee
Confidence 999999876542 233446789999999999944 455678999999999999999999998654322
Q ss_pred ---CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 274 ---NIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 274 ---~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
..-.++-+..++|+++|-.+|.+|++.+++.+++
T Consensus 271 k~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~ 307 (596)
T KOG0586|consen 271 KYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDR 307 (596)
T ss_pred eecccceeechhHHHHHHhhccCccccCCHHHhhhhc
Confidence 2345567889999999999999999999999983
|
|
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-31 Score=279.70 Aligned_cols=239 Identities=17% Similarity=0.219 Sum_probs=195.3
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCC---eEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN---EKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g---~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
.+|++++.|| .|+++.||.|..+.++ ..|++|.++.. .....+.+|+.+++.++||||+++++++.
T Consensus 4 ~~~~~~~~lg--------~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 75 (267)
T cd05066 4 SCIKIEKVIG--------AGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT 75 (267)
T ss_pred HHeEeeeeec--------ccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 3589999999 8999999999887554 37899988752 23457889999999999999999999998
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
++ ...|+||||+. +|.+++.. ....++...+..++.||+.||.||| +.+++||||+|+||+++.++.++|+|
T Consensus 76 ~~--~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH-~~~i~h~dlkp~nili~~~~~~~l~d 149 (267)
T cd05066 76 KS--KPVMIVTEYMENGSLDAFLRK---HDGQFTVIQLVGMLRGIASGMKYLS-DMGYVHRDLAARNILVNSNLVCKVSD 149 (267)
T ss_pred cC--CccEEEEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH-HCCEeehhhchhcEEECCCCeEEeCC
Confidence 87 88999999997 68888843 2246789999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------c
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------L 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l 272 (852)
||++.......... .......++..|++||++.+..++.++|+|||||++|++++ |..||.+... .
T Consensus 150 fg~~~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~ 228 (267)
T cd05066 150 FGLSRVLEDDPEAA-YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRL 228 (267)
T ss_pred CCccccccccccee-eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcC
Confidence 99987543321111 11111223457999999977778899999999999999886 9999854321 1
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.....+|+.+.+++.+|++.+|..||++.++++.+
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l 263 (267)
T cd05066 229 PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSIL 263 (267)
T ss_pred CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHH
Confidence 22346788999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=280.18 Aligned_cols=240 Identities=16% Similarity=0.199 Sum_probs=196.0
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCC-----CeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS-----NEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~-----g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
.+|++...+| .|+++.||.|+.+.+ ...|++|.+.... ....+.+|++++++++||||++++++
T Consensus 5 ~~~~~~~~lg--------~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 76 (275)
T cd05046 5 SNLQEITTLG--------RGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGL 76 (275)
T ss_pred Hhceeeeeec--------ccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEE
Confidence 3588999999 899999999997643 4689999887622 34678999999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhc-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKE-----NNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC 198 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~-----~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~ 198 (852)
+.+. ...|+||||+. +|.+++...... ...+++..+..++.||+.||.||| +.+++||||||+||+++.+
T Consensus 77 ~~~~--~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH-~~~i~H~dlkp~Nili~~~ 153 (275)
T cd05046 77 CREA--EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS-NARFVHRDLAARNCLVSSQ 153 (275)
T ss_pred ECCC--CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh-hcCcccCcCccceEEEeCC
Confidence 9887 88999999997 799888533211 126899999999999999999999 8999999999999999999
Q ss_pred CcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------
Q psy3914 199 GEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------ 271 (852)
Q Consensus 199 g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------ 271 (852)
+.++|+|||++...... .........++..|+|||.+.+..++.++|+|||||++|+|++ |..||.+...
T Consensus 154 ~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~ 230 (275)
T cd05046 154 REVKVSLLSLSKDVYNS---EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNR 230 (275)
T ss_pred CcEEEcccccccccCcc---cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHH
Confidence 99999999997632211 1111222344567999999876677889999999999999998 7888843211
Q ss_pred -------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|..+.+++.+||..+|.+||++.+++..+
T Consensus 231 ~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l 273 (275)
T cd05046 231 LQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSAL 273 (275)
T ss_pred HHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHh
Confidence 122456889999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=286.59 Aligned_cols=241 Identities=17% Similarity=0.267 Sum_probs=194.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcC-------CCeEEEEEEEeCC---CchHHHHHHHHHHHhC-CCCCcceE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-------SNEKVTIFLNDSA---DTYEPALSYVKKLKTL-RHPSILTF 122 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-------~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~L-rHPnIlk~ 122 (852)
.+|.+++.|| .|+++.||.|+... .+..|++|.+... .....+.+|+++++.+ +||||+++
T Consensus 12 ~~~~~~~~lg--------~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~ 83 (314)
T cd05099 12 DRLVLGKPLG--------EGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINL 83 (314)
T ss_pred HHeeeeeeec--------CCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeE
Confidence 4699999999 89999999997632 3467999988762 2234678899999999 69999999
Q ss_pred eeeEEcCCCCeEEEEEeecc--cHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceeccc
Q psy3914 123 LDSVESPSKSLVYLAVEYVE--PIFYHLDNTLK------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHV 188 (852)
Q Consensus 123 ~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DI 188 (852)
++++... ..+|+||||+. +|.+++..... ....++...+..++.||+.||.||| +.|++||||
T Consensus 84 ~~~~~~~--~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH-~~gi~H~dl 160 (314)
T cd05099 84 LGVCTQE--GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE-SRRCIHRDL 160 (314)
T ss_pred EEEEccC--CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH-HCCeeeccc
Confidence 9999887 88999999998 79999854221 1245788899999999999999999 899999999
Q ss_pred CCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCC
Q psy3914 189 NHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQST 267 (852)
Q Consensus 189 kp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~ 267 (852)
||+||+++.++.+||+|||+++........ .......++..|+|||++.+..++.++|+|||||++|+|++ |..||.
T Consensus 161 kp~Nill~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~ 238 (314)
T cd05099 161 AARNVLVTEDNVMKIADFGLARGVHDIDYY--KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYP 238 (314)
T ss_pred cceeEEEcCCCcEEEccccccccccccccc--cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999998754321110 11111223457999999977788899999999999999999 788885
Q ss_pred CCcc------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 268 NRKS------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 268 ~~~~------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+... ......+|..+.+++.+||+.+|..||++.++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 290 (314)
T cd05099 239 GIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEAL 290 (314)
T ss_pred CCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 4321 123456788999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-31 Score=294.25 Aligned_cols=245 Identities=15% Similarity=0.223 Sum_probs=200.6
Q ss_pred CccccccccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhC
Q psy3914 39 SPKMWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTL 114 (852)
Q Consensus 39 ~~~m~~~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~L 114 (852)
....|++. .+|++.+.|| .|+++.||.|.+..+|..|+||++... .....+.+|+.+|+.+
T Consensus 7 ~~~~~~~~-------~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l 71 (343)
T cd07880 7 NKTIWEVP-------DRYRDLKQVG--------SGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM 71 (343)
T ss_pred hhhhhccc-------cceEEEEEee--------ecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc
Confidence 44566543 3499999999 999999999999999999999998652 2234678999999999
Q ss_pred CCCCcceEeeeEEcCCC----CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccC
Q psy3914 115 RHPSILTFLDSVESPSK----SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVN 189 (852)
Q Consensus 115 rHPnIlk~~d~~e~~~~----~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIk 189 (852)
+||||+++++++..+.. ..+|+||||+. +|..++. ...+++..+..++.||+.||.||| +.+++||||+
T Consensus 72 ~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~-----~~~l~~~~~~~i~~qi~~al~~LH-~~gi~H~dlk 145 (343)
T cd07880 72 KHENVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMK-----HEKLSEDRIQFLVYQMLKGLKYIH-AAGIIHRDLK 145 (343)
T ss_pred CCCCccceeeeecCCccccccceEEEEEecCCCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCC
Confidence 99999999999876521 24699999998 6777763 246899999999999999999999 8999999999
Q ss_pred CCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCC
Q psy3914 190 HTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTN 268 (852)
Q Consensus 190 p~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~ 268 (852)
|+||+++.+|.+||+|||++...... .....+++.|++||++.+ ..++.++|+|||||++|++++|..||.+
T Consensus 146 p~Nill~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 218 (343)
T cd07880 146 PGNLAVNEDCELKILDFGLARQTDSE-------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKG 218 (343)
T ss_pred HHHEEEcCCCCEEEeecccccccccC-------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999998743221 112345778999999844 4578899999999999999999999954
Q ss_pred Ccccc------------------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 269 RKSLS------------------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 269 ~~~l~------------------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
..... ....+++.+.+++.+||+.||.+||++.+++.|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 219 HDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred CCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 32110 013567789999999999999999999999987
Q ss_pred hcCCCCCCcc
Q psy3914 307 NRKPGGYFKN 316 (852)
Q Consensus 307 l~~~~~fF~n 316 (852)
+||+.
T Consensus 299 -----~~~~~ 303 (343)
T cd07880 299 -----PYFEE 303 (343)
T ss_pred -----ccHhh
Confidence 88864
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=279.48 Aligned_cols=231 Identities=18% Similarity=0.225 Sum_probs=189.6
Q ss_pred CeeEeccc--cCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPA--VSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~I--g~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~~ 131 (852)
.|++.+.+ | .|+++.||.+.++.++..+++|++....... . |+.....+ +||||+++++.+...
T Consensus 15 ~~~~~~~~~lg--------~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-~--e~~~~~~~~~h~~iv~~~~~~~~~-- 81 (267)
T PHA03390 15 NCEIVKKLKLI--------DGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-I--EPMVHQLMKDNPNFIKLYYSVTTL-- 81 (267)
T ss_pred hhccccceeec--------CCCceEEEEEEEcCCCcEEEEEEEehhhcch-h--hHHHHHHhhcCCCEEEEEEEEecC--
Confidence 36666666 8 8999999999999999999999998622111 1 22222222 699999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC-cEEEcccch
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG-EWKLGGLEY 208 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g-~~KL~DFg~ 208 (852)
+.+|+||||+. +|.+++.. ...+++..+..++.||++||.||| +.+++||||+|+||+++.++ .++|+|||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p~nil~~~~~~~~~l~dfg~ 156 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKK----EGKLSEAEVKKIIRQLVEALNDLH-KHNIIHNDIKLENVLYDRAKDRIYLCDYGL 156 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeeeCCCCHHHEEEeCCCCeEEEecCcc
Confidence 89999999997 79888842 247899999999999999999999 89999999999999999988 999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc---------------cc
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS---------------LS 273 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~---------------l~ 273 (852)
+...... ....++..|+|||++.+..++.++|+|||||++|+|++|..||..... ..
T Consensus 157 ~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 228 (267)
T PHA03390 157 CKIIGTP--------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLP 228 (267)
T ss_pred ceecCCC--------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCC
Confidence 8644221 123467799999999777788899999999999999999999853211 11
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCC-HHHHHHhhcCCCCCCcc
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPN-PADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps-~~elL~~l~~~~~fF~n 316 (852)
.+..+++.+.+++.+||+.+|.+||+ ++++++| +||.|
T Consensus 229 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h-----~~~~~ 267 (267)
T PHA03390 229 FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH-----PFLKI 267 (267)
T ss_pred cccccCHHHHHHHHHHhccChhhCCchHHHHhcC-----CcccC
Confidence 23468899999999999999999995 6999997 99975
|
|
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=275.84 Aligned_cols=236 Identities=16% Similarity=0.204 Sum_probs=193.1
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
.+|++.+.|| .|+++.||.|....+ ..|++|.+.. ....+.+.+|+++++.++||||+++++++.. .
T Consensus 6 ~~~~~~~~ig--------~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~ 73 (260)
T cd05069 6 ESLRLDVKLG--------QGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE---E 73 (260)
T ss_pred HHeeeeeeec--------CcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcC---C
Confidence 4599999999 899999999988655 4689998876 3344678899999999999999999998754 5
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
..|+||||+. +|.+++... ....++...+..++.||+.||.||| +.+++|+||+|+||++++++.++|+|||++.
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH-~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~ 150 (260)
T cd05069 74 PIYIVTEFMGKGSLLDFLKEG--DGKYLKLPQLVDMAAQIADGMAYIE-RMNYIHRDLRAANILVGDNLVCKIADFGLAR 150 (260)
T ss_pred CcEEEEEcCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHH-hCCEeecccCcceEEEcCCCeEEECCCccce
Confidence 6899999998 798888432 2245788899999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDN 277 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~ 277 (852)
........ ......++..|+|||...+..++.++|+|||||++|+|++ |..||.+... ......
T Consensus 151 ~~~~~~~~---~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 227 (260)
T cd05069 151 LIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQG 227 (260)
T ss_pred EccCCccc---ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcc
Confidence 54321111 1112234567999999877778899999999999999999 8889854321 112346
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+|..+.+++++||..+|.+||++.++++.+
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l 257 (260)
T cd05069 228 CPESLHELMKLCWKKDPDERPTFEYIQSFL 257 (260)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence 788999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=295.26 Aligned_cols=238 Identities=16% Similarity=0.226 Sum_probs=197.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
..+|++...|| .|+++.||.|++..+++.|+||++.. ......+.+|+.+++.++||||+++++++..
T Consensus 14 ~~~y~~~~~ig--------~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 85 (343)
T cd07851 14 PDRYQNLSPVG--------SGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTP 85 (343)
T ss_pred cCceEEEEEec--------cCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhc
Confidence 34599999999 89999999999999999999999875 1233557789999999999999999998765
Q ss_pred CC----CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 129 PS----KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 129 ~~----~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
.. ...+|+|+||+. +|.+++.. ..+++..+..++.||+.||.||| +.|++||||+|+||+++.+|.+||
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH-~~gi~H~dlkp~Nill~~~~~~kL 159 (343)
T cd07851 86 ASSLEDFQDVYLVTHLMGADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIH-SAGIIHRDLKPSNIAVNEDCELKI 159 (343)
T ss_pred cccccccccEEEEEecCCCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHeEECCCCCEEE
Confidence 41 124999999998 78887732 56899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc---------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--------- 273 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--------- 273 (852)
+|||++...... .....++..|+|||.+. ...++.++|+|||||++|+|++|..||.+.....
T Consensus 160 ~dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~ 232 (343)
T cd07851 160 LDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLV 232 (343)
T ss_pred cccccccccccc-------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Confidence 999998754321 12234677899999974 3467889999999999999999999985432110
Q ss_pred ---------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 ---------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ---------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....++..+.+++.+||+.+|.+|||+.+++.| +||..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h-----~~~~~ 303 (343)
T cd07851 233 GTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH-----PYLAE 303 (343)
T ss_pred CCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC-----CCccc
Confidence 012457889999999999999999999999997 88864
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=284.13 Aligned_cols=239 Identities=15% Similarity=0.231 Sum_probs=195.3
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEE-----cCCCeEEEEEEEeCC---CchHHHHHHHHHHHhC-CCCCcceEee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKK-----KGSNEKVTIFLNDSA---DTYEPALSYVKKLKTL-RHPSILTFLD 124 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~-----k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~L-rHPnIlk~~d 124 (852)
.+|.+++.|| .|+++.||.|+. ..++..|+||++... ...+.+.+|+.+++++ +||||+++++
T Consensus 35 ~~~~~~~~ig--------~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 106 (302)
T cd05055 35 NNLSFGKTLG--------AGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLG 106 (302)
T ss_pred HHeEEcceee--------ccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEE
Confidence 4689999999 899999999975 345678999998762 2235688999999999 7999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
.+... +.+|+||||+. +|.+++... ....+++..+..++.||+.||.||| +.+++|+||||+||+++.++.+|
T Consensus 107 ~~~~~--~~~~lv~e~~~~~~L~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lH-~~~ivH~dlkp~Nil~~~~~~~~ 181 (302)
T cd05055 107 ACTIG--GPILVITEYCCYGDLLNFLRRK--RESFLTLEDLLSFSYQVAKGMAFLA-SKNCIHRDLAARNVLLTHGKIVK 181 (302)
T ss_pred EEecC--CceEEEEEcCCCCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHH-HCCeehhhhccceEEEcCCCeEE
Confidence 99887 88999999997 798888431 1234899999999999999999999 89999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc----------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS---------- 271 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~---------- 271 (852)
|+|||++......... .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 182 l~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~ 259 (302)
T cd05055 182 ICDFGLARDIMNDSNY--VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKE 259 (302)
T ss_pred ECCCcccccccCCCce--eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHc
Confidence 9999998754322111 11112345668999999977778899999999999999998 8888854221
Q ss_pred ---ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 ---LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 ---l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+++.+.+++.+||+.+|++||++.++++.+
T Consensus 260 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l 298 (302)
T cd05055 260 GYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLI 298 (302)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 112345788999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >KOG0604|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-32 Score=278.82 Aligned_cols=238 Identities=16% Similarity=0.201 Sum_probs=198.9
Q ss_pred CCeeEe-ccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhC-CCCCcceEeeeEEcC--
Q psy3914 54 FAYEVG-EPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTL-RHPSILTFLDSVESP-- 129 (852)
Q Consensus 54 ~~Y~i~-e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~-- 129 (852)
..|.|. +.+| -|-.|.|-.+.++.+|+.+|+|++.. .+.+++|++..-.. .||||+.++|+|++.
T Consensus 61 edY~is~qvLG--------~GinGkV~~C~~k~T~ekfALKvL~D---s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~ 129 (400)
T KOG0604|consen 61 EDYSISWQVLG--------AGINGKVVQCVHKRTQEKFALKVLLD---SPKARREVELHWMASGHPHIVSIIDVYENSYQ 129 (400)
T ss_pred hhheehhhhhc--------cccCCceEEEEeccchhhhHHHHHhc---CHHHHhHhhhhhhhcCCCceEEeehhhhhhcc
Confidence 458884 5566 78889999999999999999998863 56789999876555 499999999999864
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC---CcEEEc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC---GEWKLG 204 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~---g~~KL~ 204 (852)
.+.++.||||.++ .|...++.. ....+++.++..++.||..|+.||| +.+|.||||||+|++.+.. ..+||+
T Consensus 130 ~rkcLLiVmE~meGGeLfsriq~~--g~~afTErea~eI~~qI~~Av~~lH-~~nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 130 GRKCLLIVMECMEGGELFSRIQDR--GDQAFTEREASEIMKQIGLAVRYLH-SMNIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred CceeeEeeeecccchHHHHHHHHc--ccccchHHHHHHHHHHHHHHHHHHH-hcchhhccCChhheeeecCCCCcceEec
Confidence 3578999999999 587777543 2356999999999999999999999 9999999999999999864 459999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-----------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS----------- 273 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~----------- 273 (852)
||||+..... .....+.+.|+.|.|||++....|+.+.|+||||+++|-|+.|-+||+...-..
T Consensus 207 DfGFAK~t~~-----~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~ 281 (400)
T KOG0604|consen 207 DFGFAKETQE-----PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRT 281 (400)
T ss_pred ccccccccCC-----CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhc
Confidence 9999974332 122334567899999999988889999999999999999999999996543221
Q ss_pred --------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 274 --------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 274 --------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
....+++..+++|+.||..+|.+|.|+.+++.| +|..
T Consensus 282 gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h-----pwi~ 326 (400)
T KOG0604|consen 282 GQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH-----PWIN 326 (400)
T ss_pred cCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC-----chhc
Confidence 125678899999999999999999999999998 7764
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=280.05 Aligned_cols=243 Identities=15% Similarity=0.148 Sum_probs=196.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcC----CCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG----SNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~----~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
..+|++.+.|| .|+++.||.|.+.. ++..|++|.+.. ......+.+|+.+++.++||||++++++
T Consensus 5 ~~~~~~~~~i~--------~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~ 76 (280)
T cd05043 5 RDRVTLSDLLQ--------EGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHV 76 (280)
T ss_pred hhheEEeeeec--------ccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 45699999999 99999999999876 358899998875 2234567899999999999999999998
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhc----CCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKE----NNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG 199 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~----~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g 199 (852)
+... ....++++||+. +|..++...... ...+++..+..++.||+.||.||| +.+++||||+|+||+++.++
T Consensus 77 ~~~~-~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~i~H~di~p~nil~~~~~ 154 (280)
T cd05043 77 CIED-GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH-KRGVIHKDIAARNCVIDEEL 154 (280)
T ss_pred EecC-CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH-HCCEeecccCHhhEEEcCCC
Confidence 7663 267899999987 798888543221 146889999999999999999999 89999999999999999999
Q ss_pred cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-------
Q psy3914 200 EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------- 271 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------- 271 (852)
.+||+|||+++.+...... .......++..|+|||++.+..++.++|||||||++|++++ |..||.....
T Consensus 155 ~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~ 232 (280)
T cd05043 155 QVKITDNALSRDLFPMDYH--CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYL 232 (280)
T ss_pred cEEECCCCCcccccCCceE--EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHH
Confidence 9999999998754221110 01112334567999999977788999999999999999999 9999854221
Q ss_pred -----ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -----LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -----l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|+.+.+++.+||..+|+.||++.+++..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l 273 (280)
T cd05043 233 KDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCL 273 (280)
T ss_pred HcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 122346789999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=278.79 Aligned_cols=237 Identities=16% Similarity=0.222 Sum_probs=193.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCC---CeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS---NEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~---g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
...|.+.+.|| .|++|.||+|..... ...|+||.+.... ..+.+.+|+.++++++||||+++++++
T Consensus 5 ~~~~~~~~~lg--------~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~ 76 (270)
T cd05056 5 REDITLGRCIG--------EGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVI 76 (270)
T ss_pred hhhceeeeeeC--------CccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEE
Confidence 34589999999 899999999987654 3578999887622 345788999999999999999999998
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
++ ...|+||||+. +|.+++... ...++...+..++.||+.||.||| +.+++||||+|+||+++.++.+||+
T Consensus 77 ~~---~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH-~~~~~H~dl~p~nili~~~~~~~l~ 149 (270)
T cd05056 77 TE---NPVWIVMELAPLGELRSYLQVN---KYSLDLASLILYSYQLSTALAYLE-SKRFVHRDIAARNVLVSSPDCVKLG 149 (270)
T ss_pred cC---CCcEEEEEcCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccccChheEEEecCCCeEEc
Confidence 75 45789999997 798888432 235889999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------ 271 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------ 271 (852)
|||++....... ........++..|+|||.+....++.++|+|||||++|++++ |..||.+...
T Consensus 150 d~g~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~ 226 (270)
T cd05056 150 DFGLSRYLEDES---YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGER 226 (270)
T ss_pred cCceeeeccccc---ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCc
Confidence 999987443221 111112223457999999877778899999999999999986 9999854321
Q ss_pred ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|..+.+++.+|+..+|.+||++.+++..+
T Consensus 227 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l 262 (270)
T cd05056 227 LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQL 262 (270)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 223467889999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-31 Score=283.36 Aligned_cols=242 Identities=16% Similarity=0.168 Sum_probs=195.3
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcC-----CCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-----SNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-----~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
.+|++...|| .|+++.||+|..+. ++..|+||++.... ....+.+|+.++++++||||++++++
T Consensus 5 ~~~~~~~~lg--------~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~ 76 (288)
T cd05050 5 NNIEYVRDIG--------QGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGV 76 (288)
T ss_pred Hhceeccccc--------ccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEE
Confidence 4589999999 89999999998753 67899999987632 24568889999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhh------------------hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCcee
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTL------------------KENNEKKQIYISWGIFQITRALSFLINDADLRH 185 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~------------------~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH 185 (852)
+.++ ...|+|+||+. +|.+++.... .....+++..+..++.||+.||.||| +.+++|
T Consensus 77 ~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH-~~~i~H 153 (288)
T cd05050 77 CAVG--KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS-ERKFVH 153 (288)
T ss_pred EcCC--CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH-hCCeec
Confidence 9987 88999999998 7998885321 11134778889999999999999999 899999
Q ss_pred cccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCC
Q psy3914 186 NHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPL 264 (852)
Q Consensus 186 ~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~ 264 (852)
|||+|+||+++.++.+||+|||++........ .........+..|+|||++.+..++.++|+|||||++|+|++ |..
T Consensus 154 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~ 231 (288)
T cd05050 154 RDLATRNCLVGENMVVKIADFGLSRNIYSADY--YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQ 231 (288)
T ss_pred ccccHhheEecCCCceEECccccceecccCcc--ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999864322111 111111223457999999877788899999999999999997 777
Q ss_pred CCCCCcc------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 265 QSTNRKS------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 265 pf~~~~~------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
||.+... ......+|..+.+++.+||+.+|..||++.++++.++
T Consensus 232 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 232 PYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 8743211 1123567889999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=281.25 Aligned_cols=236 Identities=18% Similarity=0.209 Sum_probs=192.2
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhC---CCCCcceEeeeEEc
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTL---RHPSILTFLDSVES 128 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~L---rHPnIlk~~d~~e~ 128 (852)
|++.+.|| .|+++.||+|+++.++..|+||++... .....+.+|+.+++++ +||||+++++++..
T Consensus 1 y~~~~~l~--------~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~ 72 (287)
T cd07838 1 YEELAEIG--------EGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHG 72 (287)
T ss_pred CeEEEEec--------ccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEee
Confidence 77889999 899999999999989999999999751 2223456777766665 59999999999987
Q ss_pred CCCCe-----EEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 129 PSKSL-----VYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 129 ~~~~~-----~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
. .. +|++|||+. +|.+++... ....+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.+|
T Consensus 73 ~--~~~~~~~~~l~~e~~~~~l~~~l~~~--~~~~l~~~~~~~~~~~i~~al~~LH-~~~i~h~~l~~~nili~~~~~~~ 147 (287)
T cd07838 73 P--RTDRELKLTLVFEHVDQDLATYLSKC--PKPGLPPETIKDLMRQLLRGVDFLH-SHRIVHRDLKPQNILVTSDGQVK 147 (287)
T ss_pred c--cCCCCceeEEEehhcccCHHHHHHHc--cCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeccCChhhEEEccCCCEE
Confidence 6 44 999999998 788877432 1236899999999999999999999 89999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc---------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--------- 273 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--------- 273 (852)
|+|||++........ .....++..|+|||++.+..++.++|+|||||++|+|++|..||.+.....
T Consensus 148 l~dfg~~~~~~~~~~-----~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 222 (287)
T cd07838 148 IADFGLARIYSFEMA-----LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVI 222 (287)
T ss_pred EeccCcceeccCCcc-----cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHc
Confidence 999999875432211 112345678999999977778889999999999999999998885432110
Q ss_pred -----------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 274 -----------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 274 -----------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
....++..+.+++++||+.+|.+||++.+++.| +||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~-----~~~ 287 (287)
T cd07838 223 GLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH-----PYF 287 (287)
T ss_pred CCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC-----cCC
Confidence 012356778899999999999999999999997 776
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=278.59 Aligned_cols=239 Identities=18% Similarity=0.229 Sum_probs=194.9
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCe---EEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE---KVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~---~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.|++.+.+| .|+++.||+|..+.++. .|+||++... .....+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~~~lg--------~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~ 76 (269)
T cd05065 5 CVKIEEVIG--------AGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 76 (269)
T ss_pred HeEEEeEec--------CCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC
Confidence 489999999 99999999999887764 6999998762 234578899999999999999999999988
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
+ ..+|+||||+. +|.+++.. ..+.++...+..++.|++.||.||| +.+++|+||+|+||+++.++.+||+||
T Consensus 77 ~--~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~l~~al~~lH-~~g~~H~dl~p~nili~~~~~~kl~df 150 (269)
T cd05065 77 S--RPVMIITEFMENGALDSFLRQ---NDGQFTVIQLVGMLRGIAAGMKYLS-EMNYVHRDLAARNILVNSNLVCKVSDF 150 (269)
T ss_pred C--CceEEEEecCCCCcHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHH-HCCEeecccChheEEEcCCCcEEECCC
Confidence 7 88999999998 68888743 2356889999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcc-cccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------c
Q psy3914 207 EYMEKISEASCIPMKR-YSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------L 272 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~-~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l 272 (852)
|++.........+... ......+..|+|||.+.+..++.++|+|||||++||+++ |..||.+... .
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~ 230 (269)
T cd05065 151 GLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRL 230 (269)
T ss_pred ccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcC
Confidence 9986543322111110 001112347999999977788899999999999999886 9989854321 1
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.....+|..+.+++.+||..+|..||++.+++..+
T Consensus 231 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l 265 (269)
T cd05065 231 PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTL 265 (269)
T ss_pred CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 22356788999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=276.53 Aligned_cols=232 Identities=14% Similarity=0.217 Sum_probs=182.5
Q ss_pred cCCceEEEEEEEcC---CCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKG---SNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~---~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|+++.||+|.... ++..|+||.+... .....+.+|+.+++.++||||+++++.+... .+..|+||||+. +
T Consensus 5 ~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~lv~e~~~~~~ 83 (262)
T cd05058 5 KGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS-EGSPLVVLPYMKHGD 83 (262)
T ss_pred ccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC-CCCcEEEEecCCCCC
Confidence 89999999998653 3468999988652 2345677899999999999999999976542 256899999998 7
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|.+++.+. ....+...+..++.||+.||.||| +.+++||||+|+||+++.++.+||+|||+++...+.........
T Consensus 84 L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 159 (262)
T cd05058 84 LRNFIRSE---THNPTVKDLIGFGLQVAKGMEYLA-SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH 159 (262)
T ss_pred HHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH-hCCccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence 98888432 234567778889999999999999 89999999999999999999999999999875432211111111
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhC-CCCCCCCcc------------ccCcCCCChhHHHHHHHhc
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG-PLQSTNRKS------------LSNIDNIPENLKRVYLELI 290 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG-~~pf~~~~~------------l~~~~~ip~~L~~li~~lL 290 (852)
....++..|+|||.+.+..++.++|||||||++|||++| .+||..... ......+|+.+.+++.+||
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 239 (262)
T cd05058 160 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCW 239 (262)
T ss_pred ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHc
Confidence 123445689999998777788999999999999999995 556643221 2223457899999999999
Q ss_pred cCCCCCCCCHHHHHHhhc
Q psy3914 291 SERPNQRPNPADFIMRNR 308 (852)
Q Consensus 291 ~~nP~~Rps~~elL~~l~ 308 (852)
..+|+.||++.++++.+.
T Consensus 240 ~~~p~~Rp~~~~il~~l~ 257 (262)
T cd05058 240 HPKPEMRPTFSELVSRIE 257 (262)
T ss_pred CCChhhCCCHHHHHHHHH
Confidence 999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=286.98 Aligned_cols=237 Identities=18% Similarity=0.270 Sum_probs=197.3
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
...+|++.+.|| .|+++.||+|.++.++..|+||++.+ ......+.+|+.+++.++||||+++++++.
T Consensus 8 ~~~~y~~~~~ig--------~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 79 (328)
T cd07856 8 ITNRYVDLQPVG--------MGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFI 79 (328)
T ss_pred cccceEEEEeec--------ccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEe
Confidence 345699999999 89999999999999999999998865 233467789999999999999999999987
Q ss_pred cCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 128 SPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
.. ....|+|+||+. +|..++. ...+++..+..++.||++||.||| +.+++||||+|+||+++.+|.+||+||
T Consensus 80 ~~-~~~~~lv~e~~~~~L~~~~~-----~~~~~~~~~~~~~~ql~~aL~~LH-~~~iiH~dl~p~Nili~~~~~~~l~df 152 (328)
T cd07856 80 SP-LEDIYFVTELLGTDLHRLLT-----SRPLEKQFIQYFLYQILRGLKYVH-SAGVVHRDLKPSNILINENCDLKICDF 152 (328)
T ss_pred cC-CCcEEEEeehhccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCHHHEeECCCCCEEeCcc
Confidence 53 267999999998 6777663 246788889999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------- 272 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------- 272 (852)
|++...... .....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+....
T Consensus 153 g~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~ 225 (328)
T cd07856 153 GLARIQDPQ-------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTP 225 (328)
T ss_pred ccccccCCC-------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 998643211 112345678999998743 66888999999999999999999888543210
Q ss_pred -----------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 273 -----------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 273 -----------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
.....++..+.+++++||..+|.+||++.+++.| +||.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~-----~~~~ 292 (328)
T cd07856 226 PDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH-----PYLA 292 (328)
T ss_pred CHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC-----Cccc
Confidence 0113467889999999999999999999999997 7874
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=276.07 Aligned_cols=229 Identities=17% Similarity=0.220 Sum_probs=185.6
Q ss_pred cCCceEEEEEEEc--CCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cH
Q psy3914 72 KHTFWKFHGGKKK--GSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PI 144 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k--~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L 144 (852)
.|+++.||.|..+ .++..|+||++... ...+.+.+|+.++++++||||++++++++. ...|+||||+. +|
T Consensus 5 ~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~---~~~~lv~e~~~~~~L 81 (257)
T cd05115 5 SGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA---EALMLVMEMASGGPL 81 (257)
T ss_pred CCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC---CCeEEEEEeCCCCCH
Confidence 8999999999765 44567999998762 224568899999999999999999998864 56899999997 78
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccc
Q psy3914 145 FYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYS 224 (852)
Q Consensus 145 ~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~ 224 (852)
.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||++......... .....
T Consensus 82 ~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~ 156 (257)
T cd05115 82 NKFLSG---KKDEITVSNVVELMHQVSMGMKYLE-GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY-YKARS 156 (257)
T ss_pred HHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHH-hcCeeecccchheEEEcCCCcEEeccCCccccccCCccc-eeccC
Confidence 888742 2357899999999999999999999 899999999999999999999999999998744322111 11111
Q ss_pred cccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCCCChhHHHHHHHhcc
Q psy3914 225 RYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDNIPENLKRVYLELIS 291 (852)
Q Consensus 225 ~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~ip~~L~~li~~lL~ 291 (852)
...++..|+|||++....++.++|+|||||++|++++ |..||.+... ......+++.+.+++.+||.
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~ 236 (257)
T cd05115 157 AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWI 236 (257)
T ss_pred CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcC
Confidence 1223458999999877778889999999999999996 9999854321 12234678999999999999
Q ss_pred CCCCCCCCHHHHHHhhc
Q psy3914 292 ERPNQRPNPADFIMRNR 308 (852)
Q Consensus 292 ~nP~~Rps~~elL~~l~ 308 (852)
.+|+.||++.++.+.++
T Consensus 237 ~~~~~Rp~~~~i~~~l~ 253 (257)
T cd05115 237 YKWEDRPNFAKVEERMR 253 (257)
T ss_pred CChhhCcCHHHHHHHHh
Confidence 99999999999998765
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=275.65 Aligned_cols=236 Identities=16% Similarity=0.223 Sum_probs=193.5
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
.+|++.+.|| .|+++.||.|... ++..|++|.+.. ....+.+.+|+.++++++||||+++++++.. .
T Consensus 6 ~~~~~~~~ig--------~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~ 73 (260)
T cd05070 6 ESLQLIKKLG--------NGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE---E 73 (260)
T ss_pred HHhhhhheec--------cccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECC---C
Confidence 3589999999 8999999999876 566799999876 3345678999999999999999999998854 5
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
..|++|||+. +|.+++... ....+++..+..++.||+.||.||| +.+++||||+|+||+++.++.++|+|||++.
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH-~~~i~H~di~p~Nili~~~~~~~l~dfg~~~ 150 (260)
T cd05070 74 PIYIVTEYMSKGSLLDFLKDG--EGRALKLPNLVDMAAQVAAGMAYIE-RMNYIHRDLRSANILVGDGLVCKIADFGLAR 150 (260)
T ss_pred CcEEEEEecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCccceEEEeCCceEEeCCceeee
Confidence 6899999997 788888432 2345889999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDN 277 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~ 277 (852)
....... .......++..|+|||+..+..++.++|+|||||++|+|++ |..||.+... ......
T Consensus 151 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 227 (260)
T cd05070 151 LIEDNEY---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQD 227 (260)
T ss_pred eccCccc---ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCc
Confidence 5432111 11112234457999999877778899999999999999999 8888854321 112345
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.|..+.+++.+||..+|.+|||+.++++.+
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l 257 (260)
T cd05070 228 CPISLHELMLQCWKKDPEERPTFEYLQSFL 257 (260)
T ss_pred CCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence 788999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=277.09 Aligned_cols=239 Identities=17% Similarity=0.191 Sum_probs=194.9
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCe---EEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE---KVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~---~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.|+..+.|| .|++|.||+|+.+.++. .|+||.+... ...+.+.+|+++++.++||||+++++++..
T Consensus 6 ~~~~~~~lg--------~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 77 (268)
T cd05063 6 HITKQKVIG--------AGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK 77 (268)
T ss_pred HceEeeEec--------CCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc
Confidence 588899999 89999999999876654 7899988752 234567899999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. ...|+||||+. +|..++.. ..+.++...+..++.|++.||.||| +.+++||||||+||+++.++.+||+||
T Consensus 78 ~--~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH-~~~i~H~dlkp~Nili~~~~~~kl~df 151 (268)
T cd05063 78 F--KPAMIITEYMENGALDKYLRD---HDGEFSSYQLVGMLRGIAAGMKYLS-DMNYVHRDLAARNILVNSNLECKVSDF 151 (268)
T ss_pred C--CCcEEEEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccccchhhEEEcCCCcEEECCC
Confidence 7 88999999998 68888742 2356889999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------cc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LS 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~ 273 (852)
|++........... .......+..|+|||++.+..++.++|+|||||++|++++ |..||..... ..
T Consensus 152 g~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~ 230 (268)
T cd05063 152 GLSRVLEDDPEGTY-TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLP 230 (268)
T ss_pred ccceecccccccce-eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCC
Confidence 99874432111111 1111222447999999877778899999999999999997 9999853321 11
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
....+|..+.+++.+|+..+|..||++.++++.+.
T Consensus 231 ~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~ 265 (268)
T cd05063 231 APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLD 265 (268)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 23457889999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=274.42 Aligned_cols=227 Identities=19% Similarity=0.302 Sum_probs=193.7
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PI 144 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L 144 (852)
.|+++.||.+....+++.|++|++... .....+.+|+++++.++||||+++++.++.+ ..+|+||||+. +|
T Consensus 3 ~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~v~e~~~~~~L 80 (250)
T cd05123 3 KGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTE--EKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecC--CeeEEEEecCCCCcH
Confidence 789999999999989999999998872 2445789999999999999999999999987 89999999995 78
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccc
Q psy3914 145 FYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYS 224 (852)
Q Consensus 145 ~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~ 224 (852)
.+++.. ...+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lh-~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~----~~~~ 151 (250)
T cd05123 81 FSHLSK----EGRFSEERARFYAAEIVLALEYLH-SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG----SRTN 151 (250)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCceecCCCcceEEEcCCCcEEEeecCcceecccCC----Cccc
Confidence 888843 246899999999999999999999 8999999999999999999999999999987543211 1122
Q ss_pred cccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-----------cccCcCCCChhHHHHHHHhccCC
Q psy3914 225 RYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK-----------SLSNIDNIPENLKRVYLELISER 293 (852)
Q Consensus 225 ~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~-----------~l~~~~~ip~~L~~li~~lL~~n 293 (852)
...++..|++||...+...+.++|+|+|||++|++++|..||.... .......+|..+.+++++||..+
T Consensus 152 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 231 (250)
T cd05123 152 TFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKD 231 (250)
T ss_pred CCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCC
Confidence 3456778999999977778889999999999999999999985443 12234566899999999999999
Q ss_pred CCCCCCH---HHHHHhhcCCCCCC
Q psy3914 294 PNQRPNP---ADFIMRNRKPGGYF 314 (852)
Q Consensus 294 P~~Rps~---~elL~~l~~~~~fF 314 (852)
|..||++ .++++| +||
T Consensus 232 p~~R~~~~~~~~l~~~-----~~f 250 (250)
T cd05123 232 PTKRLGSGGAEEIKAH-----PFF 250 (250)
T ss_pred HhhCCCcccHHHHHhC-----CCC
Confidence 9999999 888887 787
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0666|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-32 Score=279.85 Aligned_cols=247 Identities=17% Similarity=0.235 Sum_probs=203.1
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCe----EEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE----KVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~----~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
+.|++...|| .|.||.||+|..+.++. .+|||.|+.+ .....+.+|+..++.|+||||+.+..+
T Consensus 24 ~~ye~ig~Ig--------~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~V 95 (438)
T KOG0666|consen 24 FEYEGIGKIG--------RGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKV 95 (438)
T ss_pred HHhhccceec--------ccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHH
Confidence 4599999999 99999999997776653 7899999873 566789999999999999999999999
Q ss_pred EEc-CCCCeEEEEEeecc-cHHHHHHhh-hhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC----
Q psy3914 126 VES-PSKSLVYLAVEYVE-PIFYHLDNT-LKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC---- 198 (852)
Q Consensus 126 ~e~-~~~~~~yIVtE~v~-~L~~~L~~~-~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~---- 198 (852)
+.. + .++++++||.+ +|...++-. ......++...++.+++||+.|+.||| +.=++||||||.||+|..+
T Consensus 96 fl~~d--~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH-~NWvlHRDLKPaNIlvmgdgper 172 (438)
T KOG0666|consen 96 FLSHD--KKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH-SNWVLHRDLKPANILVMGDGPER 172 (438)
T ss_pred HhccC--ceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh-hhheeeccCCcceEEEeccCCcc
Confidence 877 5 89999999999 899988632 223357889999999999999999999 8889999999999999987
Q ss_pred CcEEEcccchhhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc------
Q psy3914 199 GEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS------ 271 (852)
Q Consensus 199 g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------ 271 (852)
|.+||+|||+++.+.+.. .|.......+.|..|+|||.+ ....|+.++|+|++|||+.||++-.+.|.+...
T Consensus 173 G~VKIaDlGlaR~~~~pl-kpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~ 251 (438)
T KOG0666|consen 173 GRVKIADLGLARLFNNPL-KPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKN 251 (438)
T ss_pred CeeEeecccHHHHhhccc-cccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCC
Confidence 899999999999765432 333344456778999999998 677899999999999999999998766643210
Q ss_pred ------c---------------cCc------------------------------CCCChhHHHHHHHhccCCCCCCCCH
Q psy3914 272 ------L---------------SNI------------------------------DNIPENLKRVYLELISERPNQRPNP 300 (852)
Q Consensus 272 ------l---------------~~~------------------------------~~ip~~L~~li~~lL~~nP~~Rps~ 300 (852)
+ ..+ ..-++...+++.+||+.||.+|.|+
T Consensus 252 Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta 331 (438)
T KOG0666|consen 252 PFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITA 331 (438)
T ss_pred CchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccH
Confidence 0 000 1124446789999999999999999
Q ss_pred HHHHHhhcCCCCCCcch
Q psy3914 301 ADFIMRNRKPGGYFKND 317 (852)
Q Consensus 301 ~elL~~l~~~~~fF~n~ 317 (852)
.+.++| .||...
T Consensus 332 ~qAleh-----~yF~~d 343 (438)
T KOG0666|consen 332 EQALEH-----PYFTED 343 (438)
T ss_pred HHHhcc-----cccccC
Confidence 999998 888653
|
|
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=272.66 Aligned_cols=235 Identities=17% Similarity=0.293 Sum_probs=194.9
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCC----eEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN----EKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g----~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
+++++.|| .|++|.||+|.....+ ..|++|++.... ....+.+|+..++.++||||+++++.+.+
T Consensus 1 ~~~~~~lg--------~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 72 (258)
T smart00219 1 LTLGKKLG--------EGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTE 72 (258)
T ss_pred Ccccceec--------cCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcC
Confidence 35678888 8999999999998766 899999997732 46688999999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. +..|++|||+. +|.+++.... ...+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+||
T Consensus 73 ~--~~~~~i~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh-~~~~~h~dl~~~nil~~~~~~~~l~df 147 (258)
T smart00219 73 E--EPLMIVMEYMEGGDLLDYLRKNR--PKELSLSDLLSFALQIARGMEYLE-SKNFIHRDLAARNCLVGENLVVKISDF 147 (258)
T ss_pred C--CeeEEEEeccCCCCHHHHHHhhh--hccCCHHHHHHHHHHHHHHHHHHh-cCCeeecccccceEEEccCCeEEEccc
Confidence 7 89999999997 7888884321 112899999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------cc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LS 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~ 273 (852)
|++.......... .....++..|+|||.+....++.++|+|||||++|+|++ |..||..... ..
T Consensus 148 g~~~~~~~~~~~~---~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~ 224 (258)
T smart00219 148 GLSRDLYDDDYYK---KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLP 224 (258)
T ss_pred CCceecccccccc---cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 9987543321111 001235678999999977788899999999999999998 7888753211 12
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
....+|..+.+++.+||+.+|..|||+.++++.
T Consensus 225 ~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 257 (258)
T smart00219 225 KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEI 257 (258)
T ss_pred CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhh
Confidence 345678999999999999999999999999864
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-31 Score=291.03 Aligned_cols=237 Identities=15% Similarity=0.199 Sum_probs=188.7
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCC----chHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSAD----TYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIF 145 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~----~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~ 145 (852)
.|++++||.|.++.+|+.|+||++.... ..+.+++|+.+++.++||||+++++++... ..+|+|+||+. +|.
T Consensus 10 ~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~--~~~~~v~e~~~~~~l~ 87 (328)
T cd08226 10 FCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTG--SWLWVISPFMAYGSAN 87 (328)
T ss_pred ccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecC--CceEEEEecccCCCHH
Confidence 4689999999999999999999987622 246788999999999999999999999987 88999999998 688
Q ss_pred HHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCC---CCcc
Q psy3914 146 YHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCI---PMKR 222 (852)
Q Consensus 146 ~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~---~~~~ 222 (852)
.++.+.. ...+++..+..++.||+.||.||| +.+++||||||+||+++.++.++++||+.+......... ....
T Consensus 88 ~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH-~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (328)
T cd08226 88 SLLKTYF--PEGMSEALIGNILFGALRGLNYLH-QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDF 164 (328)
T ss_pred HHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccc
Confidence 8875432 235889999999999999999999 899999999999999999999999999876533221111 0001
Q ss_pred cccccCCCcccCCccccC--CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc---------------------------
Q psy3914 223 YSRYEDQSTYQIPENSLS--HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--------------------------- 273 (852)
Q Consensus 223 ~~~~~gt~~Y~APE~~~~--~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--------------------------- 273 (852)
.....++..|++||++.+ ..++.++|||||||++|+|++|..||.+.....
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (328)
T cd08226 165 PQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMK 244 (328)
T ss_pred cccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhc
Confidence 111234557999999854 447789999999999999999999985321100
Q ss_pred -------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchH
Q psy3914 274 -------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 274 -------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~l 318 (852)
....+++.+.+++++||..||.+|||+.++++| +||.+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~-----~~~~~~~ 315 (328)
T cd08226 245 NSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH-----AFFKQVK 315 (328)
T ss_pred cchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC-----HHHHHHH
Confidence 011245678999999999999999999999998 7876543
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=282.07 Aligned_cols=240 Identities=15% Similarity=0.173 Sum_probs=193.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCC-CCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLR-HPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~ 129 (852)
..|++.+.+| .|+++.||+|.++.++..|+||.+... .....+.+|+..+..+. ||||+++++++.++
T Consensus 15 ~~~~~~~~lg--------~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~ 86 (296)
T cd06618 15 NDLENLGEIG--------SGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITD 86 (296)
T ss_pred chheeeeEee--------ccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecC
Confidence 4589999999 899999999999989999999999762 22334556666666664 99999999999987
Q ss_pred CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 130 SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 130 ~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+|+||||+. .|..++.. ....+++..+..++.||+.||.|||+..+++||||+|+||+++.++.+||+|||+
T Consensus 87 --~~~~~v~e~~~~~l~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~ 161 (296)
T cd06618 87 --SDVFICMELMSTCLDKLLKR---IQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGI 161 (296)
T ss_pred --CeEEEEeeccCcCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECcccc
Confidence 89999999998 56665532 1247889999999999999999999447999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCC----CCCcchhHHhHHHHHHHHHhCCCCCCCCcc-------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSH----VTKCSTDMYGLGILIWEVFNGPLQSTNRKS------------- 271 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~----~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------------- 271 (852)
+..+...... ....++..|+|||.+.+. .++.++|+|||||++|+|++|..||.....
T Consensus 162 ~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 236 (296)
T cd06618 162 SGRLVDSKAK-----TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEP 236 (296)
T ss_pred chhccCCCcc-----cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCC
Confidence 8754321111 122456789999998433 377899999999999999999999854211
Q ss_pred --ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 272 --LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 272 --l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
......++..+.+++.+||+.+|..||++.+++.| +||.+
T Consensus 237 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~-----~~~~~ 278 (296)
T cd06618 237 PSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH-----PFIRR 278 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC-----hhhhc
Confidence 11112478889999999999999999999999997 78765
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=278.79 Aligned_cols=238 Identities=12% Similarity=0.119 Sum_probs=193.2
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCe----EEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE----KVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~----~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
...|++.+.|| .|++++||+|++..+++ .|+||++... .....+.+|+.+++.+.||||+++++.
T Consensus 6 ~~~~~~~~~lg--------~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~ 77 (279)
T cd05109 6 ETELKKVKVLG--------SGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGI 77 (279)
T ss_pred hhheeeeeecC--------CCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEE
Confidence 45689999999 89999999999877776 4899988752 234567889999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+.. ...++++||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||
T Consensus 78 ~~~---~~~~l~~~~~~~g~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~lH-~~~iiH~dlkp~Nil~~~~~~~kL 150 (279)
T cd05109 78 CLT---STVQLVTQLMPYGCLLDYVRE---NKDRIGSQDLLNWCVQIAKGMSYLE-EVRLVHRDLAARNVLVKSPNHVKI 150 (279)
T ss_pred EcC---CCcEEEEEcCCCCCHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccccccceEEEcCCCcEEE
Confidence 875 35789999997 78888742 2356889999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-----------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS----------- 271 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~----------- 271 (852)
+|||+++........ .......++..|+|||...+..++.++|||||||++|||++ |..||.....
T Consensus 151 ~dfG~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~ 228 (279)
T cd05109 151 TDFGLARLLDIDETE--YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE 228 (279)
T ss_pred CCCCceeecccccce--eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC
Confidence 999998754321111 11112234568999999977788899999999999999998 8888854221
Q ss_pred -ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......++..+.+++.+||..+|..||++.++++.+
T Consensus 229 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l 265 (279)
T cd05109 229 RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEF 265 (279)
T ss_pred cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 122346788999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=277.04 Aligned_cols=225 Identities=16% Similarity=0.197 Sum_probs=183.8
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCC-----chHHHHHHHH-HHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSAD-----TYEPALSYVK-KLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~-----~~~~~~~E~~-~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|+++.||+|+++.+++.|+||++.... .......|.. ....++||||+++++.++.. +.+|+||||+. +
T Consensus 6 ~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv~e~~~~~~ 83 (260)
T cd05611 6 KGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSK--DYLYLVMEYLNGGD 83 (260)
T ss_pred cCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcC--CeEEEEEeccCCCC
Confidence 8999999999999999999999997621 1122334433 34455899999999999987 89999999998 7
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|..++.. ...+++..+..++.||+.||.||| +.+++||||+|+||+++.++.+||+|||++..... .
T Consensus 84 L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH-~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~--------~ 150 (260)
T cd05611 84 CASLIKT----LGGLPEDWAKQYIAEVVLGVEDLH-QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE--------N 150 (260)
T ss_pred HHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHeEECCCCcEEEeecccceeccc--------c
Confidence 8888842 256899999999999999999999 89999999999999999999999999999764321 1
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------------cCcCCCChhHHHHHHH
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------SNIDNIPENLKRVYLE 288 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------~~~~~ip~~L~~li~~ 288 (852)
....++..|++||.+.+..++.++|+||||+++|+|++|..||...... .....+|+.+.+++.+
T Consensus 151 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 230 (260)
T cd05611 151 KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINR 230 (260)
T ss_pred ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHH
Confidence 2344677899999986666889999999999999999999998543211 1123578999999999
Q ss_pred hccCCCCCCCCH---HHHHHhhcCCCCCCcc
Q psy3914 289 LISERPNQRPNP---ADFIMRNRKPGGYFKN 316 (852)
Q Consensus 289 lL~~nP~~Rps~---~elL~~l~~~~~fF~n 316 (852)
||+.+|..||++ .+++.| +||.+
T Consensus 231 ~l~~~p~~R~~~~~~~~~l~~-----~~~~~ 256 (260)
T cd05611 231 LLCMDPAKRLGANGYQEIKSH-----PFFKS 256 (260)
T ss_pred HccCCHHHccCCCcHHHHHcC-----hHhhc
Confidence 999999999955 677776 78864
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=277.76 Aligned_cols=231 Identities=14% Similarity=0.224 Sum_probs=188.3
Q ss_pred cCCceEEEEEEEcCCC------eEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc
Q psy3914 72 KHTFWKFHGGKKKGSN------EKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE 142 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g------~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~ 142 (852)
.|+++.||.|+.+..+ ..|+||.+... .....+.+|+.+++.++||||+++++++... ...|+||||+.
T Consensus 5 ~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~v~e~~~ 82 (269)
T cd05044 5 SGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN--EPQYIIMELME 82 (269)
T ss_pred cccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC--CCeEEEEeccC
Confidence 8999999999986544 78999988652 3456788999999999999999999999887 88999999997
Q ss_pred --cHHHHHHhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC-----cEEEcccchhhcc
Q psy3914 143 --PIFYHLDNTLK---ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG-----EWKLGGLEYMEKI 212 (852)
Q Consensus 143 --~L~~~L~~~~~---~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g-----~~KL~DFg~a~~~ 212 (852)
+|.+++.+... ....++...+..++.||+.||.||| +.+++|+||+|+||+++.++ .++|+|||++...
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH-~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~ 161 (269)
T cd05044 83 GGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE-QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDI 161 (269)
T ss_pred CCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH-hCCcccCCCChheEEEecCCCCCCcceEECCccccccc
Confidence 79998854322 1234788899999999999999999 89999999999999999887 8999999998754
Q ss_pred ccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCc------------cccCcCCCC
Q psy3914 213 SEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRK------------SLSNIDNIP 279 (852)
Q Consensus 213 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~------------~l~~~~~ip 279 (852)
..... ........++..|+|||++.+..++.++|+|||||++|+|++ |..||.... .......+|
T Consensus 162 ~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05044 162 YKSDY--YRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENCP 239 (269)
T ss_pred ccccc--cccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcccch
Confidence 22111 111112334568999999977778999999999999999998 888884321 122345788
Q ss_pred hhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 280 ENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 280 ~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
..+.+++.+||..+|.+||++.++++.+
T Consensus 240 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l 267 (269)
T cd05044 240 DKIYQLMTNCWAQDPSERPTFDRIQEIL 267 (269)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHHHH
Confidence 9999999999999999999999998864
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=278.00 Aligned_cols=228 Identities=16% Similarity=0.227 Sum_probs=185.6
Q ss_pred cCCceEEEEEEEcCCCe--EEEEEEEeC---CCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGSNE--KVTIFLNDS---ADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~--~VaVKv~~~---~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|+++.||+|+.+.++. .+++|.+.. ....+.+.+|+.+++++ +||||+++++++... ..+|+||||+. +
T Consensus 5 ~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~~lv~e~~~~~~ 82 (270)
T cd05047 5 EGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--GYLYLAIEYAPHGN 82 (270)
T ss_pred CCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC--CCceEEEEeCCCCc
Confidence 89999999999988875 468887764 22345788999999999 799999999999987 88999999997 7
Q ss_pred HHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 144 IFYHLDNTLK------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 144 L~~~L~~~~~------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
|.+++.+... ....++...+.+++.||+.||.||| +.+++||||||+||+++.++.+||+|||++..
T Consensus 83 L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH-~~~i~H~dikp~nili~~~~~~kl~dfgl~~~ 161 (270)
T cd05047 83 LLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS-QKQFIHRDLAARNILVGENYVAKIADFGLSRG 161 (270)
T ss_pred HHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH-HCCEeecccccceEEEcCCCeEEECCCCCccc
Confidence 9998854221 1235789999999999999999999 89999999999999999999999999999753
Q ss_pred cccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCc------------cccCcCCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRK------------SLSNIDNI 278 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~------------~l~~~~~i 278 (852)
..... .......+..|+|||++....++.++|+|||||++|+|++ |..||.+.. .......+
T Consensus 162 ~~~~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 236 (270)
T cd05047 162 QEVYV-----KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC 236 (270)
T ss_pred cchhh-----hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcC
Confidence 21100 0001122457999999877788899999999999999997 899985432 11233457
Q ss_pred ChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 279 PENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 279 p~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+..+.+++.+|+..+|..||++.+++..+
T Consensus 237 ~~~~~~li~~~l~~~p~~Rps~~~il~~l 265 (270)
T cd05047 237 DDEVYDLMRQCWREKPYERPSFAQILVSL 265 (270)
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHHHHH
Confidence 88999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=279.97 Aligned_cols=227 Identities=16% Similarity=0.229 Sum_probs=186.1
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHH---HhCCCCCcceEeeeEEcCCCCeEEEEEeecc-
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKL---KTLRHPSILTFLDSVESPSKSLVYLAVEYVE- 142 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~L---k~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~- 142 (852)
.|++|.||.+.+..+++.|+||++... .......++..++ ...+||||+.+++.+... +..|+||||+.
T Consensus 4 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv~e~~~~ 81 (279)
T cd05633 4 RGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP--DKLCFILDLMNG 81 (279)
T ss_pred cCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC--CeEEEEEecCCC
Confidence 899999999999999999999998761 1122344444333 344799999999999987 88999999998
Q ss_pred -cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCc
Q psy3914 143 -PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMK 221 (852)
Q Consensus 143 -~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~ 221 (852)
+|..++.. .+.+++..+..++.||+.||.||| +.+++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH-~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~------ 150 (279)
T cd05633 82 GDLHYHLSQ----HGVFSEKEMRFYATEIILGLEHMH-NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK------ 150 (279)
T ss_pred CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc------
Confidence 68877742 356899999999999999999999 899999999999999999999999999998643221
Q ss_pred ccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------ccCcCCCChhHHHHH
Q psy3914 222 RYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------LSNIDNIPENLKRVY 286 (852)
Q Consensus 222 ~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------l~~~~~ip~~L~~li 286 (852)
......++..|+|||... +..++.++|+|||||++|+|++|..||..... ......++..+.+++
T Consensus 151 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 230 (279)
T cd05633 151 KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLL 230 (279)
T ss_pred CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHH
Confidence 111245788999999984 56678899999999999999999999953211 112346788999999
Q ss_pred HHhccCCCCCCC-----CHHHHHHhhcCCCCCCcc
Q psy3914 287 LELISERPNQRP-----NPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 287 ~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n 316 (852)
++||..||.+|+ ++.++++| +||+.
T Consensus 231 ~~~l~~~p~~R~~~~~~~~~~~~~h-----~~~~~ 260 (279)
T cd05633 231 EGLLQRDVSKRLGCLGRGAQEVKEH-----VFFKG 260 (279)
T ss_pred HHHhcCCHHHhcCCCCCCHHHHHhC-----ccccC
Confidence 999999999999 69999997 89976
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=283.44 Aligned_cols=236 Identities=17% Similarity=0.233 Sum_probs=198.4
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
|+....|| .|+++.||.|..+.+|+.|+||++.. ......+.+|+.+++.++||||+++++.+... .+
T Consensus 22 ~~~~~~lg--------~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~ 91 (292)
T cd06657 22 LDNFIKIG--------EGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG--DE 91 (292)
T ss_pred hhhHHHcC--------CCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeC--CE
Confidence 34456788 89999999999999999999999865 23445688999999999999999999999987 89
Q ss_pred EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 134 VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 134 ~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
.|+||||+. +|.+++. ...+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.++|+|||++..
T Consensus 92 ~~lv~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH-~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~ 165 (292)
T cd06657 92 LWVVMEFLEGGALTDIVT-----HTRMNEEQIAAVCLAVLKALSVLH-AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ 165 (292)
T ss_pred EEEEEecCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHEEECCCCCEEEccccccee
Confidence 999999998 6777663 246789999999999999999999 89999999999999999999999999999764
Q ss_pred cccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------ccCcCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------LSNIDN 277 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------l~~~~~ 277 (852)
..... .......++..|+|||.+.+..++.++|+|||||++|+|++|..||.+... ...+..
T Consensus 166 ~~~~~----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (292)
T cd06657 166 VSKEV----PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHK 241 (292)
T ss_pred ccccc----ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCccc
Confidence 43211 111234567889999998777778899999999999999999999854321 123456
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
++..+.+++.+||..+|.+||++.+++.| +||..
T Consensus 242 ~~~~l~~li~~~l~~~P~~R~~~~~ll~~-----~~~~~ 275 (292)
T cd06657 242 VSPSLKGFLDRLLVRDPAQRATAAELLKH-----PFLAK 275 (292)
T ss_pred CCHHHHHHHHHHHhCCcccCcCHHHHhcC-----hHHhc
Confidence 78999999999999999999999999997 77754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=282.37 Aligned_cols=236 Identities=17% Similarity=0.235 Sum_probs=197.6
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
|...+.+| .|++++||.|++..+|..|+||++... .....+.+|+.+++.++||||+++++++++.
T Consensus 23 ~~~~~~lg--------~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 93 (313)
T cd06633 23 FVGLHEIG--------HGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE- 93 (313)
T ss_pred hhcceeec--------cCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC-
Confidence 66677899 899999999999999999999998751 2234678899999999999999999999987
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
...|+||||+. +|..++.. ....+++.++..++.||+.||.||| +.|++|+||+|+||+++.+|.+||+|||++
T Consensus 94 -~~~~lv~e~~~~~l~~~l~~---~~~~l~~~~~~~~~~qi~~al~~LH-~~gi~H~dl~p~nili~~~~~~kL~dfg~~ 168 (313)
T cd06633 94 -HTAWLVMEYCLGSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLH-SHNMIHRDIKAGNILLTEPGQVKLADFGSA 168 (313)
T ss_pred -CEEEEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCChhhEEECCCCCEEEeecCCC
Confidence 89999999998 67776632 2356889999999999999999999 899999999999999999999999999997
Q ss_pred hccccccCCCCcccccccCCCcccCCcccc---CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSL---SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------- 273 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------- 273 (852)
..... .....++..|+|||++. ...++.++|+|||||++|+|++|..||.+.....
T Consensus 169 ~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 240 (313)
T cd06633 169 SKSSP--------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTL 240 (313)
T ss_pred cccCC--------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC
Confidence 53211 12345777899999973 4567889999999999999999999985432111
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchH
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~l 318 (852)
....++..+.+++.+||+.+|.+||++.+++.| +||....
T Consensus 241 ~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~-----~~~~~~~ 280 (313)
T cd06633 241 QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH-----DFVRRDR 280 (313)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHHhcC-----cccCCCc
Confidence 123567789999999999999999999999997 8997643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=287.63 Aligned_cols=242 Identities=16% Similarity=0.267 Sum_probs=195.0
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCC-------CeEEEEEEEeCC---CchHHHHHHHHHHHhC-CCCCcce
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS-------NEKVTIFLNDSA---DTYEPALSYVKKLKTL-RHPSILT 121 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~-------g~~VaVKv~~~~---~~~~~~~~E~~~Lk~L-rHPnIlk 121 (852)
..+|++++.|| .|++|.||.|.+... +..|++|++... .....+.+|+++++++ +||||++
T Consensus 11 ~~~~~i~~~ig--------~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~ 82 (334)
T cd05100 11 RTRLTLGKPLG--------EGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIIN 82 (334)
T ss_pred HhHeeecceec--------cccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeee
Confidence 34699999999 999999999986432 247899988752 2345788999999999 7999999
Q ss_pred EeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecc
Q psy3914 122 FLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLK------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNH 187 (852)
Q Consensus 122 ~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~D 187 (852)
+++.+... ..+|+++||+. +|.++|.+... ....++...+..++.||+.||.||| +.+++|||
T Consensus 83 ~~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH-~~givH~d 159 (334)
T cd05100 83 LLGACTQD--GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA-SQKCIHRD 159 (334)
T ss_pred eeEEEccC--CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH-HCCeeccc
Confidence 99999887 88999999998 79998854211 1235777888999999999999999 89999999
Q ss_pred cCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCC
Q psy3914 188 VNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQS 266 (852)
Q Consensus 188 Ikp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf 266 (852)
|||+||+++.++.+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 160 lkp~Nill~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~ 237 (334)
T cd05100 160 LAARNVLVTEDNVMKIADFGLARDVHNIDY--YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPY 237 (334)
T ss_pred cccceEEEcCCCcEEECCcccceecccccc--cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCC
Confidence 999999999999999999999875432111 111111223457999999988888899999999999999998 78887
Q ss_pred CCCcc------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 267 TNRKS------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 267 ~~~~~------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.+... ......++..+.+++.+||+.+|.+||++.++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l 290 (334)
T cd05100 238 PGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDL 290 (334)
T ss_pred CCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 54321 122346688999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=278.17 Aligned_cols=237 Identities=14% Similarity=0.163 Sum_probs=191.3
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCe----EEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE----KVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~----~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
..|++.+.|| .|+++.||+|....++. .|++|.+... .....+.+++..++.++||||+++++++
T Consensus 7 ~~~~~~~~lg--------~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~ 78 (279)
T cd05111 7 TELRKLKLLG--------SGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGIC 78 (279)
T ss_pred hhceeccccC--------ccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEE
Confidence 3588999999 99999999999987776 4777777542 2335667788889999999999999987
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
.. ...++++||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+
T Consensus 79 ~~---~~~~~i~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH-~~~iiH~dlkp~nili~~~~~~kl~ 151 (279)
T cd05111 79 PG---ASLQLVTQLSPLGSLLDHVRQ---HRDSLDPQRLLNWCVQIAKGMYYLE-EHRMVHRNLAARNILLKSDSIVQIA 151 (279)
T ss_pred CC---CccEEEEEeCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH-HCCEeccccCcceEEEcCCCcEEEc
Confidence 54 45788999988 79888843 2356889999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------ 271 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------ 271 (852)
|||+++....... ........++..|+|||++.+..++.++|+|||||++||+++ |..||.+...
T Consensus 152 Dfg~~~~~~~~~~--~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~ 229 (279)
T cd05111 152 DFGVADLLYPDDK--KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGER 229 (279)
T ss_pred CCccceeccCCCc--ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCc
Confidence 9999875432111 111223445668999999977778999999999999999998 9999855321
Q ss_pred ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......++..+..++.+|+..+|..||++.++++.+
T Consensus 230 ~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l 265 (279)
T cd05111 230 LAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEF 265 (279)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 112334677899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=272.12 Aligned_cols=226 Identities=16% Similarity=0.249 Sum_probs=185.7
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cHHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFY 146 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~ 146 (852)
.|+++.||+|... ++..|++|++.... ....+.+|+.+++.++||||+++++.+... ...|+||||+. +|.+
T Consensus 5 ~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 5 KGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQR--QPIYIVMELVPGGDFLS 81 (250)
T ss_pred CCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC--CccEEEEECCCCCcHHH
Confidence 8999999999865 68899999987622 234578899999999999999999999987 88999999997 7888
Q ss_pred HHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccc
Q psy3914 147 HLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRY 226 (852)
Q Consensus 147 ~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~ 226 (852)
++.. ....+++..+..++.||+.+|.||| +.+++||||+|+||+++.++.+||+|||++........ ......
T Consensus 82 ~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH-~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~---~~~~~~ 154 (250)
T cd05085 82 FLRK---KKDELKTKQLVKFALDAAAGMAYLE-SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY---SSSGLK 154 (250)
T ss_pred HHHh---cCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeecccChheEEEcCCCeEEECCCccceecccccc---ccCCCC
Confidence 7742 2246789999999999999999999 89999999999999999999999999999864322111 111112
Q ss_pred cCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCCCChhHHHHHHHhccCC
Q psy3914 227 EDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDNIPENLKRVYLELISER 293 (852)
Q Consensus 227 ~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~ip~~L~~li~~lL~~n 293 (852)
.++..|+|||++.+..++.++|+|||||++|++++ |..||.+... ......+|..+.+++.+|++.+
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 234 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYK 234 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccC
Confidence 33457999999977778889999999999999998 8888854311 1224568899999999999999
Q ss_pred CCCCCCHHHHHHhh
Q psy3914 294 PNQRPNPADFIMRN 307 (852)
Q Consensus 294 P~~Rps~~elL~~l 307 (852)
|+.||++.++++.+
T Consensus 235 p~~Rp~~~~l~~~l 248 (250)
T cd05085 235 PENRPKFSELQKEL 248 (250)
T ss_pred cccCCCHHHHHHHh
Confidence 99999999998864
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=273.04 Aligned_cols=227 Identities=17% Similarity=0.239 Sum_probs=186.9
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cHHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFY 146 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~ 146 (852)
.|+++.||.|.+.. ++.|++|++.... ....+.+|+++++.++||||+++++++.+. ...|+|+||+. +|.+
T Consensus 5 ~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v~e~~~~~~l~~ 81 (251)
T cd05041 5 KGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQK--QPIYIVMELVPGGSLLT 81 (251)
T ss_pred cCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC--CCeEEEEEcCCCCcHHH
Confidence 89999999999977 9999999987622 345788999999999999999999999987 88999999996 7888
Q ss_pred HHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccc
Q psy3914 147 HLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRY 226 (852)
Q Consensus 147 ~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~ 226 (852)
++.+. ...++...+..++.|++.||.||| +.+++||||+|+||+++.++.+||+|||++........... ....
T Consensus 82 ~l~~~---~~~~~~~~~~~~~~~~~~~l~~lH-~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~--~~~~ 155 (251)
T cd05041 82 FLRKK---KNRLTVKKLLQMSLDAAAGMEYLE-SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVS--DGLK 155 (251)
T ss_pred HHHhc---CCCCCHHHHHHHHHHHHHHHHHHH-hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceec--cccC
Confidence 88432 246788899999999999999999 89999999999999999999999999999874432111100 0111
Q ss_pred cCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCc------------cccCcCCCChhHHHHHHHhccCC
Q psy3914 227 EDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRK------------SLSNIDNIPENLKRVYLELISER 293 (852)
Q Consensus 227 ~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~------------~l~~~~~ip~~L~~li~~lL~~n 293 (852)
..+..|+|||.+.+..++.++|+|||||++|+|++ |..||.+.. .......+|..+.+++.+||..+
T Consensus 156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 235 (251)
T cd05041 156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYD 235 (251)
T ss_pred cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccC
Confidence 22457999999877778899999999999999999 788874322 11223467889999999999999
Q ss_pred CCCCCCHHHHHHhh
Q psy3914 294 PNQRPNPADFIMRN 307 (852)
Q Consensus 294 P~~Rps~~elL~~l 307 (852)
|.+||++.++++.+
T Consensus 236 p~~Rp~~~ell~~l 249 (251)
T cd05041 236 PENRPSFSEIYNEL 249 (251)
T ss_pred hhhCcCHHHHHHHh
Confidence 99999999999864
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >KOG0607|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.5e-32 Score=279.63 Aligned_cols=242 Identities=15% Similarity=0.236 Sum_probs=203.6
Q ss_pred eeE-eccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCC-CCCcceEeeeEEcCCC
Q psy3914 56 YEV-GEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLR-HPSILTFLDSVESPSK 131 (852)
Q Consensus 56 Y~i-~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~~~ 131 (852)
|.+ ++.+| .|.|+.|..+....+|..+|||++++ ......+.+|+.++.+.+ |+||++++++||++
T Consensus 79 YkLt~e~LG--------eGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd-- 148 (463)
T KOG0607|consen 79 YKLTSELLG--------EGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD-- 148 (463)
T ss_pred HHhHHHHhc--------CccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc--
Confidence 666 56777 89999999999999999999999999 456678899999999997 99999999999999
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc---EEEccc
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE---WKLGGL 206 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~---~KL~DF 206 (852)
+.+|+|+|.+. +|...+.+. ..+++.++..++..|+.||.||| +.||.||||||+||+...... +|||||
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~----~~F~E~EAs~vvkdia~aLdFlH-~kgIAHRDlKPENiLC~~pn~vsPvKiCDf 223 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKR----KHFNEREASRVVKDIASALDFLH-TKGIAHRDLKPENILCESPNKVSPVKICDF 223 (463)
T ss_pred ceEEEEEecccCchHHHHHHHh----hhccHHHHHHHHHHHHHHHHHHh-hcCcccccCCccceeecCCCCcCceeeecc
Confidence 99999999998 777777543 57899999999999999999999 999999999999999976543 899999
Q ss_pred chhhccccccCC-CC--cccccccCCCcccCCccc-----cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------
Q psy3914 207 EYMEKISEASCI-PM--KRYSRYEDQSTYQIPENS-----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------ 272 (852)
Q Consensus 207 g~a~~~~~~~~~-~~--~~~~~~~gt~~Y~APE~~-----~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------ 272 (852)
++.+.+...... |. ...-+.+|+..|||||++ ....|+.+.|.||||+++|-|+.|-+||.|....
T Consensus 224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdr 303 (463)
T KOG0607|consen 224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDR 303 (463)
T ss_pred ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccC
Confidence 998754432211 21 122345788999999995 4567899999999999999999999999654221
Q ss_pred ------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 ------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 ------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
+....|+.+..+++..+|..++..|.++.+++.| ||++-.
T Consensus 304 Ge~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh-----Pw~~~~ 367 (463)
T KOG0607|consen 304 GEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH-----PWVQRC 367 (463)
T ss_pred CCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC-----cccccc
Confidence 0124678889999999999999999999999997 888653
|
|
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=272.05 Aligned_cols=235 Identities=16% Similarity=0.203 Sum_probs=193.6
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
+|++.+.|| .|+++.||+|... ++..++||.+.. ......+.+|++++++++||||++++++++.. ..
T Consensus 5 ~~~~~~~ig--------~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~ 73 (256)
T cd05112 5 ELTLVQEIG--------SGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTER--SP 73 (256)
T ss_pred HeEEEeeec--------CcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccC--Cc
Confidence 588999999 8999999999885 467899998876 23346788999999999999999999999887 88
Q ss_pred EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 134 VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 134 ~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
.|+|+||+. +|.+++.. ..+.+++..+..++.|++.+|.||| +.+++|+||+|+||+++.++.+||+|||++..
T Consensus 74 ~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lH-~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~ 149 (256)
T cd05112 74 ICLVFEFMEHGCLSDYLRA---QRGKFSQETLLGMCLDVCEGMAYLE-SSNVIHRDLAARNCLVGENQVVKVSDFGMTRF 149 (256)
T ss_pred eEEEEEcCCCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHH-HCCccccccccceEEEcCCCeEEECCCcceee
Confidence 999999998 68888742 2246788999999999999999999 89999999999999999999999999999874
Q ss_pred cccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDNI 278 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~i 278 (852)
..... ........++..|+|||++.+..++.++|+|||||++|||++ |..||..... .......
T Consensus 150 ~~~~~---~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (256)
T cd05112 150 VLDDQ---YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLA 226 (256)
T ss_pred cccCc---ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCC
Confidence 43211 111112234558999999977778899999999999999998 8999853321 1112346
Q ss_pred ChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 279 PENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 279 p~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+..+.+++.+||+.+|.+||++.++++.+
T Consensus 227 ~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 227 SQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 88899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=274.03 Aligned_cols=232 Identities=16% Similarity=0.226 Sum_probs=193.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
.+|++.+.+| .|+++.||.|.. +++.|++|.+........+.+|+.+++.++||||+++++.+..+ .
T Consensus 6 ~~~~~~~~lg--------~g~~g~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---~ 72 (254)
T cd05083 6 QKLTLGEIIG--------EGEFGAVLQGEY--TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHN---G 72 (254)
T ss_pred HHceeeeeec--------cCCCCceEeccc--CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCC---C
Confidence 3589999999 899999999864 78899999998755567789999999999999999999998754 4
Q ss_pred EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 134 VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 134 ~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
.|+||||+. +|.+++... ....++...+..++.|++.||.||| +.+++||||+|+||+++.+|.+||+|||++..
T Consensus 73 ~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~ 149 (254)
T cd05083 73 LYIVMELMSKGNLVNFLRTR--GRALVSVIQLLQFSLDVAEGMEYLE-SKKLVHRDLAARNILVSEDGVAKVSDFGLARV 149 (254)
T ss_pred cEEEEECCCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccccCcceEEEcCCCcEEECCCcccee
Confidence 799999997 798888432 2245788899999999999999999 89999999999999999999999999999864
Q ss_pred cccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDNI 278 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~i 278 (852)
.... ......+..|+|||.+.+..++.++|+|||||++|+|++ |..||.+... ......+
T Consensus 150 ~~~~-------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (254)
T cd05083 150 GSMG-------VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGC 222 (254)
T ss_pred cccc-------CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcC
Confidence 3211 011223457999999877778889999999999999997 8888854321 1224567
Q ss_pred ChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 279 PENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 279 p~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
|..+.+++++||+.+|..||++.++++.++
T Consensus 223 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 223 PADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 899999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=285.69 Aligned_cols=242 Identities=17% Similarity=0.191 Sum_probs=195.8
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCC--CeEEEEEEEeC----CCchHHHHHHHHHHHhCC-CCCcceEeeeEE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS--NEKVTIFLNDS----ADTYEPALSYVKKLKTLR-HPSILTFLDSVE 127 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~--g~~VaVKv~~~----~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e 127 (852)
+|++.+.|| .|+++.||.++...+ +..|+||++.. ......+.+|+.+++.++ ||||+++++...
T Consensus 1 ~y~~~~~lg--------~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 72 (332)
T cd07857 1 RYELIKELG--------QGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDI 72 (332)
T ss_pred CceEEEEcc--------ccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeee
Confidence 489999999 899999999999888 89999998875 223456788999999995 999999998754
Q ss_pred cC--CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 128 SP--SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 128 ~~--~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
.. ....+|+++|++. +|...+. ....+++..++.++.||+.||.||| +.+++||||||+||+++.+|.+||+
T Consensus 73 ~~~~~~~~~~~~~e~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH-~~givH~dlkp~Nili~~~~~~kl~ 147 (332)
T cd07857 73 VFPGNFNELYLYEELMEADLHQIIR----SGQPLTDAHFQSFIYQILCGLKYIH-SANVLHRDLKPGNLLVNADCELKIC 147 (332)
T ss_pred eccccCCcEEEEEecccCCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCHHHeEEcCCCCEEeC
Confidence 21 2256899999998 7877773 3357899999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----------- 272 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----------- 272 (852)
|||++..+...............|+..|+|||++. ...++.++|+|||||++|+|++|..||.+....
T Consensus 148 Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~ 227 (332)
T cd07857 148 DFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLG 227 (332)
T ss_pred cCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhC
Confidence 99998754432211111222356788999999874 456788999999999999999999988543210
Q ss_pred -------------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 273 -------------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 273 -------------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.....++..+.+++.+||+.+|..||++.+++.| +||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~-----~~~ 295 (332)
T cd07857 228 TPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH-----PYL 295 (332)
T ss_pred CCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC-----hhh
Confidence 0112457789999999999999999999999987 776
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-30 Score=280.82 Aligned_cols=240 Identities=16% Similarity=0.212 Sum_probs=199.3
Q ss_pred cccccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCC
Q psy3914 43 WAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHP 117 (852)
Q Consensus 43 ~~~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHP 117 (852)
+.+|..++... |+..+.+| .|+++.||+|++..++..|+||++... .....+.+|+++++.++||
T Consensus 16 ~~~~~~~~~~~--f~~~~~lg--------~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ 85 (317)
T cd06635 16 ELFFKEDPEKL--FTDLREIG--------HGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHP 85 (317)
T ss_pred HHhcCCCchhh--hhhhheec--------cCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCC
Confidence 34566655443 78889999 999999999999999999999998751 2234678899999999999
Q ss_pred CcceEeeeEEcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEc
Q psy3914 118 SILTFLDSVESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN 196 (852)
Q Consensus 118 nIlk~~d~~e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~ 196 (852)
||+++++++.++ ...|+||||+. +|.+.+.. ....+++..+..++.||+.||.||| +.+++||||+|+||+++
T Consensus 86 ~iv~~~~~~~~~--~~~~lv~e~~~g~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~lH-~~~i~H~dL~p~Nil~~ 159 (317)
T cd06635 86 NSIEYKGCYLRE--HTAWLVMEYCLGSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLH-SHNMIHRDIKAGNILLT 159 (317)
T ss_pred CEEEEEEEEeeC--CeEEEEEeCCCCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCcccEEEC
Confidence 999999999987 88999999998 67666632 2356899999999999999999999 89999999999999999
Q ss_pred cCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccc---cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-
Q psy3914 197 SCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENS---LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL- 272 (852)
Q Consensus 197 ~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~---~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l- 272 (852)
.++.+||+|||++..... .....++..|+|||++ ....++.++|+|||||++|+|++|..||.+....
T Consensus 160 ~~~~~kl~dfg~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~ 231 (317)
T cd06635 160 EPGQVKLADFGSASIASP--------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 231 (317)
T ss_pred CCCCEEEecCCCccccCC--------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 999999999998763321 1123567789999997 3456788999999999999999999998543221
Q ss_pred ------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 273 ------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 273 ------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.....+++.+.+++.+||+.+|.+||++.+++.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 232 ALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred HHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence 1123567889999999999999999999999997
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=275.61 Aligned_cols=238 Identities=15% Similarity=0.206 Sum_probs=196.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcC-CCeEEEEEEEeC------------CCchHHHHHHHHHHHh-CCCCCcc
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-SNEKVTIFLNDS------------ADTYEPALSYVKKLKT-LRHPSIL 120 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-~g~~VaVKv~~~------------~~~~~~~~~E~~~Lk~-LrHPnIl 120 (852)
.|++.+.|| .|+++.||.|..+. ++..++||.+.. ......+.+|+.++.+ ++||||+
T Consensus 1 ~y~~~~~ig--------~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~ 72 (269)
T cd08528 1 EYAVLEHLG--------SGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIV 72 (269)
T ss_pred Cchhhhhhc--------CCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCee
Confidence 388899999 89999999999987 678999998764 1123346678887764 7999999
Q ss_pred eEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC
Q psy3914 121 TFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC 198 (852)
Q Consensus 121 k~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~ 198 (852)
++++.+..+ +..|+||||+. +|.+++.........+++..++.++.|++.+|.|||+..+++|+||+|.||+++.+
T Consensus 73 ~~~~~~~~~--~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~ 150 (269)
T cd08528 73 RYYKTFLEN--DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGED 150 (269)
T ss_pred eEEeeEccC--CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCC
Confidence 999999987 89999999997 78888854444456789999999999999999999944789999999999999999
Q ss_pred CcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------
Q psy3914 199 GEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------ 272 (852)
Q Consensus 199 g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------ 272 (852)
+.+||+|||++....... ......++..|++||.+.+..++.++|+|||||++|+|++|..||......
T Consensus 151 ~~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~ 225 (269)
T cd08528 151 DKVTITDFGLAKQKQPES-----KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKI 225 (269)
T ss_pred CcEEEecccceeeccccc-----ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHH
Confidence 999999999987543211 223455778999999997777889999999999999999999998543211
Q ss_pred -----c--CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 273 -----S--NIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 273 -----~--~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
. ....+++.+.+++++||..||..||++.++..++
T Consensus 226 ~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~ 267 (269)
T cd08528 226 VEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMI 267 (269)
T ss_pred hhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHh
Confidence 0 1125788999999999999999999999998864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=272.30 Aligned_cols=229 Identities=16% Similarity=0.223 Sum_probs=188.2
Q ss_pred cCCceEEEEEEEcC-CC--eEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKG-SN--EKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~-~g--~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~ 143 (852)
.|+++.||+|.... .+ ..|+||.+... .....+.+|++.+++++||||+++++.+.. ..+|+||||+. +
T Consensus 5 ~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~~~~~~ 81 (257)
T cd05040 5 DGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT---HPLMMVTELAPLGS 81 (257)
T ss_pred ccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC---CeEEEEEEecCCCc
Confidence 89999999998865 33 36899998873 335678899999999999999999999875 67999999997 7
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
|.+++.+... ..+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.+||+|||++..+..... .....
T Consensus 82 L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH-~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~ 157 (257)
T cd05040 82 LLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLE-SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED-HYVME 157 (257)
T ss_pred HHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHH-hCCccccccCcccEEEecCCEEEecccccccccccccc-ceecc
Confidence 9888854321 46889999999999999999999 89999999999999999999999999999875533211 11111
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCc-------------cccCcCCCChhHHHHHHHh
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRK-------------SLSNIDNIPENLKRVYLEL 289 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~-------------~l~~~~~ip~~L~~li~~l 289 (852)
....++..|+|||++.+..++.++|+|||||++|+|++ |..||.... .......+|..+.+++.+|
T Consensus 158 ~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 237 (257)
T cd05040 158 EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQC 237 (257)
T ss_pred cCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHH
Confidence 23345678999999987788999999999999999998 999984321 1223356789999999999
Q ss_pred ccCCCCCCCCHHHHHHhh
Q psy3914 290 ISERPNQRPNPADFIMRN 307 (852)
Q Consensus 290 L~~nP~~Rps~~elL~~l 307 (852)
|..+|++||++.++++.+
T Consensus 238 l~~~p~~Rps~~~~~~~l 255 (257)
T cd05040 238 WAHNPADRPTFAALREFL 255 (257)
T ss_pred CCCCcccCCCHHHHHHHh
Confidence 999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=276.00 Aligned_cols=239 Identities=15% Similarity=0.232 Sum_probs=197.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-------CCchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-------ADTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-------~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
+|.+.+.|| .|+++.||++++...+..+.+|++.. ......+.+|+.+++.++||||+++++.+.
T Consensus 1 ~y~i~~~ig--------~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 72 (260)
T cd08222 1 RYILQQRLG--------KGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFL 72 (260)
T ss_pred Cceeeeeec--------CCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHh
Confidence 589999999 99999999999988877777777654 123345678899999999999999999998
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
+. ...|+|+||+. +|.+++.........+++..+..++.|++.||.||| +.+++|+||+|+||+++. +.+||+|
T Consensus 73 ~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH-~~~i~h~~l~~~nili~~-~~~~l~d 148 (260)
T cd08222 73 ER--DAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH-QRRILHRDLKAKNIFLKN-NLLKIGD 148 (260)
T ss_pred cC--CceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH-HcCccccCCChhheEeec-CCEeecc
Confidence 87 78999999998 788888654444567899999999999999999999 899999999999999975 6799999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------c
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------S 273 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------~ 273 (852)
||++........ ......++..|+|||...+..++.++|+||||+++|+|++|..||.+.... .
T Consensus 149 ~g~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (260)
T cd08222 149 FGVSRLLMGSCD----LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPS 224 (260)
T ss_pred cCceeecCCCcc----cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCC
Confidence 999865432111 112345677899999987777888999999999999999999998543221 1
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
....++..+.+++.+||..+|.+||++.++++| +||
T Consensus 225 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~-----~~~ 260 (260)
T cd08222 225 LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN-----PFI 260 (260)
T ss_pred CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC-----CCC
Confidence 234678899999999999999999999999997 776
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=278.90 Aligned_cols=236 Identities=19% Similarity=0.282 Sum_probs=194.7
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCC-CCCcceEeeeEEcCCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLR-HPSILTFLDSVESPSK 131 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~~~ 131 (852)
|++.+.|| .|++++||+|+...+++.|+||.+... .......+|+..++.++ ||||+++++.++.+
T Consensus 1 y~~~~~ig--------~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~-- 70 (283)
T cd07830 1 YKVIKQLG--------DGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREN-- 70 (283)
T ss_pred Ceeheeec--------cCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcC--
Confidence 67889999 899999999999999999999998762 12234567899999999 99999999999987
Q ss_pred CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
...|+||||+. +|.+++.... ...+++..+..++.||+.+|.||| +.+++|+||+|+||+++.++.++|+|||++.
T Consensus 71 ~~~~lv~e~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh-~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 71 DELYFVFEYMEGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIH-KHGFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred CcEEEEEecCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCChhhEEEcCCCCEEEeecccce
Confidence 89999999998 6877774321 246899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc----------------
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---------------- 273 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---------------- 273 (852)
...... ......++..|+|||++ ....++.++|+|||||++|+|++|..||.+.....
T Consensus 148 ~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (283)
T cd07830 148 EIRSRP-----PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQD 222 (283)
T ss_pred eccCCC-----CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhh
Confidence 543211 11234567789999987 45567889999999999999999998884332100
Q ss_pred -------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 274 -------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 274 -------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
.....+..+.+++++||..+|.+||++.+++.| +||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~-----~~~ 283 (283)
T cd07830 223 WPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH-----PYF 283 (283)
T ss_pred hhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC-----CCC
Confidence 012336789999999999999999999999997 776
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG0584|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=299.18 Aligned_cols=247 Identities=17% Similarity=0.249 Sum_probs=201.3
Q ss_pred ccccCCCCCCCCe-eEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC------CCchHHHHHHHHHHHhCCC
Q psy3914 44 AFFGRDASKDFAY-EVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS------ADTYEPALSYVKKLKTLRH 116 (852)
Q Consensus 44 ~~~~r~p~~~~~Y-~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~------~~~~~~~~~E~~~Lk~LrH 116 (852)
.+...+|. .+| +..+.+| .|.+-+||+|.+..+|-.||--.+.. ....+.+..|+.+|+.|+|
T Consensus 31 ~~ve~~p~--gRy~k~~evLG--------rGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H 100 (632)
T KOG0584|consen 31 EFVEKDPT--GRYLKFDEVLG--------RGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKH 100 (632)
T ss_pred cccccCCC--Cceeehhhhcc--------cccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCC
Confidence 34444433 344 4477888 99999999999999998887433322 4556899999999999999
Q ss_pred CCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-CCceecccCCCCE
Q psy3914 117 PSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLIND-ADLRHNHVNHTSI 193 (852)
Q Consensus 117 PnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~-~~ivH~DIkp~NI 193 (852)
|||+++++++.+..+.++.||||.+. +|..|+.+. +.++...++.|+.||++||.|||+. -.|||||||.+||
T Consensus 101 ~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~----~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNI 176 (632)
T KOG0584|consen 101 PNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKH----RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNI 176 (632)
T ss_pred CceeeeeeheecCCCceeeeeeecccCCcHHHHHHHh----ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceE
Confidence 99999999999886677999999999 699998544 5678889999999999999999932 2599999999999
Q ss_pred EEcc-CCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc
Q psy3914 194 FINS-CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL 272 (852)
Q Consensus 194 lV~~-~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l 272 (852)
||+. .|.+||||+|+++.... .......|||.|||||++. ..|+..+||||||+++.||.|+.+||......
T Consensus 177 FinG~~G~VKIGDLGLAtl~r~------s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~ 249 (632)
T KOG0584|consen 177 FVNGNLGEVKIGDLGLATLLRK------SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP 249 (632)
T ss_pred EEcCCcCceeecchhHHHHhhc------cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH
Confidence 9996 69999999999985432 1222478999999999986 67889999999999999999999999543322
Q ss_pred cC-------------cCCC-ChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 SN-------------IDNI-PENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 ~~-------------~~~i-p~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.+ +.++ .++++.+|.+||.. .+.|+|+.++|.+ +||...
T Consensus 250 AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d-----~Ff~~d 302 (632)
T KOG0584|consen 250 AQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKD-----PFFDED 302 (632)
T ss_pred HHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhC-----hhhccc
Confidence 21 2222 45789999999999 9999999999997 898653
|
|
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=288.53 Aligned_cols=237 Identities=15% Similarity=0.225 Sum_probs=194.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|+++.||.|.+..+|+.|+||++... .....+.+|+.++++++||||+++++++...
T Consensus 17 ~~y~~~~~lg--------~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 17 ERYQNLSPVG--------SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred CceEEEEEee--------ecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 4599999999 999999999999999999999998762 1245677899999999999999999988643
Q ss_pred C----CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 130 S----KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 130 ~----~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
. ...+|++++++. +|.+++. ...+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.+||+
T Consensus 89 ~~~~~~~~~~lv~~~~~~~L~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~dlkp~NIll~~~~~~kl~ 162 (345)
T cd07877 89 RSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKIL 162 (345)
T ss_pred ccccccccEEEEehhcccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecCCChHHEEEcCCCCEEEe
Confidence 1 145899999987 6777663 146889999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC---------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN--------- 274 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~--------- 274 (852)
|||++...... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.+......
T Consensus 163 dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 235 (345)
T cd07877 163 DFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 235 (345)
T ss_pred ccccccccccc-------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 99998743221 112456778999999744 5678899999999999999999999854321100
Q ss_pred ---------------------------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 275 ---------------------------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 275 ---------------------------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....++.+.+++.+||+.+|.+||++.+++.| +||..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h-----~~f~~ 305 (345)
T cd07877 236 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH-----AYFAQ 305 (345)
T ss_pred CCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC-----hhhhh
Confidence 11346778999999999999999999999997 78863
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=287.43 Aligned_cols=243 Identities=16% Similarity=0.262 Sum_probs=193.1
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEE-----cCCCeEEEEEEEeCC---CchHHHHHHHHHHHhC-CCCCcceEee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKK-----KGSNEKVTIFLNDSA---DTYEPALSYVKKLKTL-RHPSILTFLD 124 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~-----k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~L-rHPnIlk~~d 124 (852)
.+|++++.|| .|+||.||+|.+ ..+++.|+||++... .....+.+|+.+|..+ +||||+++++
T Consensus 7 ~~~~~~~~lG--------~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~ 78 (343)
T cd05103 7 DRLKLGKPLG--------RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 78 (343)
T ss_pred hHhccccccc--------CCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcc
Confidence 3599999999 999999999984 346789999999762 2345678899999999 6899999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhh-------------------------------------------------
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLK------------------------------------------------- 153 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~------------------------------------------------- 153 (852)
++... ...+|+||||+. +|.+++.....
T Consensus 79 ~~~~~-~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (343)
T cd05103 79 ACTKP-GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKS 157 (343)
T ss_pred eeecC-CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCc
Confidence 87653 257899999998 79888853210
Q ss_pred --------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCC
Q psy3914 154 --------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIP 219 (852)
Q Consensus 154 --------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~ 219 (852)
....++...+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||++........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~-- 234 (343)
T cd05103 158 LSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLA-SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-- 234 (343)
T ss_pred cccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcc--
Confidence 0123677788889999999999999 99999999999999999999999999999875422111
Q ss_pred CcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-------------ccCcCCCChhHHHH
Q psy3914 220 MKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS-------------LSNIDNIPENLKRV 285 (852)
Q Consensus 220 ~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~-------------l~~~~~ip~~L~~l 285 (852)
........++..|+|||++.+..++.++|+|||||++|+|++ |..||.+... ...+..+++.+.++
T Consensus 235 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (343)
T cd05103 235 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 314 (343)
T ss_pred hhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHH
Confidence 111112334567999999977788899999999999999997 8888854221 11233467789999
Q ss_pred HHHhccCCCCCCCCHHHHHHhhc
Q psy3914 286 YLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 286 i~~lL~~nP~~Rps~~elL~~l~ 308 (852)
+.+||..+|.+||++.++++++.
T Consensus 315 ~~~cl~~~p~~Rps~~eil~~l~ 337 (343)
T cd05103 315 MLDCWHGEPSQRPTFSELVEHLG 337 (343)
T ss_pred HHHHccCChhhCcCHHHHHHHHH
Confidence 99999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >KOG4645|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-32 Score=324.68 Aligned_cols=248 Identities=16% Similarity=0.213 Sum_probs=209.5
Q ss_pred cccccccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCC
Q psy3914 41 KMWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRH 116 (852)
Q Consensus 41 ~m~~~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrH 116 (852)
++.++++. -.+++.-+.+|| .|.||.||.|.+.++|+..|+|.+.. ......+.+|+++|..|+|
T Consensus 1225 kla~~lsn---V~~rWqrg~~Ig--------~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnH 1293 (1509)
T KOG4645|consen 1225 KLASSLSN---VTFRWQRGNFIG--------GGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNH 1293 (1509)
T ss_pred HHHHHhcc---ceeeeccccccC--------CcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccC
Confidence 34444443 567888899999 89999999999999999999998766 4456788999999999999
Q ss_pred CCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEE
Q psy3914 117 PSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIF 194 (852)
Q Consensus 117 PnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIl 194 (852)
||+++|+++-.+. ...||.||||. +|.++++. .+..++....++..|++.||.||| ..|||||||||.|||
T Consensus 1294 pNlV~YyGVEvHR--ekv~IFMEyC~~GsLa~ll~~----gri~dE~vt~vyt~qll~gla~LH-~~gIVHRDIK~aNI~ 1366 (1509)
T KOG4645|consen 1294 PNLVRYYGVEVHR--EKVYIFMEYCEGGSLASLLEH----GRIEDEMVTRVYTKQLLEGLAYLH-EHGIVHRDIKPANIL 1366 (1509)
T ss_pred ccccccCceeecH--HHHHHHHHHhccCcHHHHHHh----cchhhhhHHHHHHHHHHHHHHHHH-hcCceecCCCcccee
Confidence 9999999998877 88999999999 78888842 245778888999999999999999 999999999999999
Q ss_pred EccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccc---cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-
Q psy3914 195 INSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENS---LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK- 270 (852)
Q Consensus 195 V~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~---~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~- 270 (852)
++.+|.+|++|||.+..+..+...-......+.||+.|||||++ .+.....+.|||||||++.||.||+.||...+
T Consensus 1367 Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn 1446 (1509)
T KOG4645|consen 1367 LDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN 1446 (1509)
T ss_pred eecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc
Confidence 99999999999999987765432222344468899999999998 34566779999999999999999999995332
Q ss_pred ------------cccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 271 ------------SLSNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 271 ------------~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
....+.+++..-+++|.+||..||++|.++.|+++|
T Consensus 1447 e~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1447 EWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred hhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 123345677788999999999999999999999998
|
|
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=276.13 Aligned_cols=241 Identities=16% Similarity=0.187 Sum_probs=195.5
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcC----CCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG----SNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~----~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
.|++.+.|| .|+++.||.|+... ++..|+||++.... ....+.+|++.++.++||||+++++++.
T Consensus 5 ~~~~~~~ig--------~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~ 76 (284)
T cd05038 5 HLKFIKQLG--------EGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCE 76 (284)
T ss_pred hchhheeec--------cCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeee
Confidence 477889999 89999999998643 47899999998733 3568899999999999999999999988
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
...+...|+||||+. +|.+++... ...++...+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+|
T Consensus 77 ~~~~~~~~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~aL~~lH-~~~i~H~dl~p~nil~~~~~~~~l~d 152 (284)
T cd05038 77 KPGGRSLRLIMEYLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKGMDYLG-SQRYIHRDLAARNILVESEDLVKISD 152 (284)
T ss_pred cCCCCceEEEEecCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHhEEEcCCCCEEEcc
Confidence 743478999999997 798888432 235889999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-------------- 271 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-------------- 271 (852)
||++......... ........++..|++||...+..++.++|+|||||++|+|++|..|+.....
T Consensus 153 fg~~~~~~~~~~~-~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd05038 153 FGLAKVLPEDKDY-YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMI 231 (284)
T ss_pred cccccccccCCcc-eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccccccccc
Confidence 9998755421111 1111112334579999998777788899999999999999999888743211
Q ss_pred -------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 272 -------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 272 -------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
......+|..+.+++.+||+.+|..||++.++++.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~ 281 (284)
T cd05038 232 VTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVD 281 (284)
T ss_pred HHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHh
Confidence 0112456788999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=283.79 Aligned_cols=232 Identities=17% Similarity=0.258 Sum_probs=184.2
Q ss_pred CceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cHHHH
Q psy3914 74 TFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYH 147 (852)
Q Consensus 74 s~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~ 147 (852)
+.+.||.++.+.+++.|+||++.. ......+.+|+..++.++||||+++++++.+. ...|++|||+. +|.++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~ 89 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD--SELYVVSPLMAYGSCEDL 89 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecC--CeEEEEEeccCCCCHHHH
Confidence 335566666666999999999876 23456789999999999999999999999987 88999999998 68888
Q ss_pred HHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccC---CCCcccc
Q psy3914 148 LDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASC---IPMKRYS 224 (852)
Q Consensus 148 L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~---~~~~~~~ 224 (852)
+.+.. ...+++..+..++.||+.||.||| +.+|+||||+|+||+++.+|.+||+||+.+........ .......
T Consensus 90 l~~~~--~~~~~~~~~~~~~~~l~~~L~~LH-~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~ 166 (314)
T cd08216 90 LKTHF--PEGLPELAIAFILKDVLNALDYIH-SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPK 166 (314)
T ss_pred HHHhc--ccCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccc
Confidence 85332 246889999999999999999999 89999999999999999999999999998864432111 1111122
Q ss_pred cccCCCcccCCccccC--CCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC----------------------------
Q psy3914 225 RYEDQSTYQIPENSLS--HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN---------------------------- 274 (852)
Q Consensus 225 ~~~gt~~Y~APE~~~~--~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~---------------------------- 274 (852)
...++..|+|||++.. ..++.++|+|||||++|+|++|..||.+......
T Consensus 167 ~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
T cd08216 167 SSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQS 246 (314)
T ss_pred cccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcc
Confidence 3456678999999843 4578899999999999999999999853211000
Q ss_pred -----------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 275 -----------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 275 -----------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
...++..+.+++.+||..||.+||++.++++| +||+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~-----p~~~ 299 (314)
T cd08216 247 RSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH-----SFFK 299 (314)
T ss_pred cccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC-----chHh
Confidence 01123467889999999999999999999997 8875
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >KOG0690|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=277.51 Aligned_cols=246 Identities=17% Similarity=0.245 Sum_probs=207.0
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
..|+..+.+| .|.||.|..++.+.+++.+|||++++ ......-..|-++|+..+||.+..+.-.|++
T Consensus 168 ~dFdfLKvLG--------kGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt 239 (516)
T KOG0690|consen 168 EDFDFLKVLG--------KGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQT 239 (516)
T ss_pred chhhHHHHhc--------CCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhcc
Confidence 4567789999 99999999999999999999999988 3334455677789999999999999888998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. ..+|+||||+. .|..+|. ....+++.....+-..|+.||.||| +.+||.||||.+|++++.+|++||.||
T Consensus 240 ~--drlCFVMeyanGGeLf~HLs----rer~FsE~RtRFYGaEIvsAL~YLH-s~~ivYRDlKLENLlLDkDGHIKitDF 312 (516)
T KOG0690|consen 240 Q--DRLCFVMEYANGGELFFHLS----RERVFSEDRTRFYGAEIVSALGYLH-SRNIVYRDLKLENLLLDKDGHIKITDF 312 (516)
T ss_pred C--ceEEEEEEEccCceEeeehh----hhhcccchhhhhhhHHHHHHhhhhh-hCCeeeeechhhhheeccCCceEeeec
Confidence 7 99999999998 5887773 2467889999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-----------cccCc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK-----------SLSNI 275 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~-----------~l~~~ 275 (852)
|+|..- -........++|||.|.|||++....|+.++|.|++|+++|||+.|++||++.+ .++.+
T Consensus 313 GLCKE~----I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFP 388 (516)
T KOG0690|consen 313 GLCKEE----IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFP 388 (516)
T ss_pred ccchhc----ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCC
Confidence 998731 112234457899999999999999999999999999999999999999997653 34557
Q ss_pred CCCChhHHHHHHHhccCCCCCCC--CHHHHHHhhcCCCCCCcchHHH
Q psy3914 276 DNIPENLKRVYLELISERPNQRP--NPADFIMRNRKPGGYFKNDLID 320 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rp--s~~elL~~l~~~~~fF~n~lv~ 320 (852)
..++++.+.++..+|..+|++|. .+++..+.++ +.||...-.+
T Consensus 389 r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~--h~FF~~v~W~ 433 (516)
T KOG0690|consen 389 RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR--HRFFASVDWE 433 (516)
T ss_pred ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh--hhhhccCCHH
Confidence 88999999999999999999996 3334433322 2777665443
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-30 Score=290.85 Aligned_cols=241 Identities=16% Similarity=0.238 Sum_probs=194.7
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEc-----CCCeEEEEEEEeCC---CchHHHHHHHHHHHhCC-CCCcceEeee
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKK-----GSNEKVTIFLNDSA---DTYEPALSYVKKLKTLR-HPSILTFLDS 125 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k-----~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~ 125 (852)
.|.+++.|| .|+||.||+|+++ .++..|+||++... ...+.+.+|+++|..+. ||||+++++.
T Consensus 38 ~~~~~~~lG--------~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 38 NLVLGRTLG--------SGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred Heehhhhcc--------CCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 478889999 9999999999864 34578999999862 22346789999999997 9999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhh--------------------------------------------------
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLK-------------------------------------------------- 153 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~-------------------------------------------------- 153 (852)
+... +.+||||||+. +|.++|.+...
T Consensus 110 ~~~~--~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (401)
T cd05107 110 CTKG--GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESA 187 (401)
T ss_pred EccC--CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcccc
Confidence 9887 88999999998 79998853211
Q ss_pred --------------------------------------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccC
Q psy3914 154 --------------------------------------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVN 189 (852)
Q Consensus 154 --------------------------------------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIk 189 (852)
....++...+..++.||+.||.||| +.+++|||||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~ivHrdlk 266 (401)
T cd05107 188 DYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA-SKNCVHRDLA 266 (401)
T ss_pred CccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh-cCCcCcccCC
Confidence 0123566778889999999999999 8999999999
Q ss_pred CCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCC
Q psy3914 190 HTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTN 268 (852)
Q Consensus 190 p~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~ 268 (852)
|+||+++.++.+||+|||++..+...... .......++..|+|||++.+..++.++|+|||||++|||++ |..||..
T Consensus 267 p~NiLl~~~~~~kL~DfGla~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~ 344 (401)
T cd05107 267 ARNVLICEGKLVKICDFGLARDIMRDSNY--ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPE 344 (401)
T ss_pred cceEEEeCCCEEEEEecCcceeccccccc--ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999999998754221111 11112345678999999977778899999999999999998 8888854
Q ss_pred Ccc-------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 269 RKS-------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 269 ~~~-------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
... ...+..++..+.+++.+||..+|..||++.+++..++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~ 397 (401)
T cd05107 345 LPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVG 397 (401)
T ss_pred CCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 221 1223457889999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-30 Score=274.44 Aligned_cols=228 Identities=15% Similarity=0.231 Sum_probs=186.6
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHH---HHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc-
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSY---VKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE- 142 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E---~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~- 142 (852)
.|+++.||.|.+..+++.|+||++... .......++ ++.++...||+|+++++.++.. ..+|+||||+.
T Consensus 4 ~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~v~e~~~g 81 (278)
T cd05606 4 RGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP--DKLSFILDLMNG 81 (278)
T ss_pred cCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC--CEEEEEEecCCC
Confidence 899999999999999999999998762 111223333 3445556899999999999987 89999999998
Q ss_pred -cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCc
Q psy3914 143 -PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMK 221 (852)
Q Consensus 143 -~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~ 221 (852)
+|..++. ..+.+++..++.++.|++.||.||| +.+++||||+|+||+++.++.+||+|||++..+...
T Consensus 82 ~~L~~~l~----~~~~l~~~~~~~~~~ql~~~l~~lH-~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~------ 150 (278)
T cd05606 82 GDLHYHLS----QHGVFSEAEMRFYAAEIILGLEHMH-NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK------ 150 (278)
T ss_pred CcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH-HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc------
Confidence 6877773 2357899999999999999999999 899999999999999999999999999998643221
Q ss_pred ccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------ccCcCCCChhHHHHH
Q psy3914 222 RYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------LSNIDNIPENLKRVY 286 (852)
Q Consensus 222 ~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------l~~~~~ip~~L~~li 286 (852)
......|+..|+|||++. +..++.++|+|||||++|+|++|..||.+... ......++..+.+++
T Consensus 151 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li 230 (278)
T cd05606 151 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL 230 (278)
T ss_pred CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHH
Confidence 112345788999999984 44678899999999999999999999954311 112345688999999
Q ss_pred HHhccCCCCCCC-----CHHHHHHhhcCCCCCCcch
Q psy3914 287 LELISERPNQRP-----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 287 ~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n~ 317 (852)
.+||..+|..|| ++.++++| +||+..
T Consensus 231 ~~~l~~~p~~R~~~~~~~~~~ll~~-----~~~~~~ 261 (278)
T cd05606 231 EGLLQRDVNRRLGCLGRGAQEVKEH-----PFFRSL 261 (278)
T ss_pred HHHhhcCHHhccCCCCCCHHHHHhC-----ccccCC
Confidence 999999999999 99999997 898764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-30 Score=279.35 Aligned_cols=235 Identities=16% Similarity=0.210 Sum_probs=195.8
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|+..+.+| .|+++.||.|+.+.++..|+||.+.. ......+.+|+++++.++||||+++++++...
T Consensus 16 ~~~~~~~lg--------~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 87 (308)
T cd06634 16 LFSDLREIG--------HGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE 87 (308)
T ss_pred HHHHHHhee--------eCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC
Confidence 478888899 89999999999999999999999864 12234577899999999999999999999987
Q ss_pred CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 130 SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 130 ~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
...|+|+||+. +|.+.+.. ....+++..+..++.|++.||.||| ..+++||||+|+||+++.+|.+||+|||+
T Consensus 88 --~~~~lv~e~~~~~l~~~~~~---~~~~l~~~~~~~~~~~l~~~l~~LH-~~~i~H~dl~p~nil~~~~~~~kl~dfg~ 161 (308)
T cd06634 88 --HTAWLVMEYCLGSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLH-SHNMIHRDVKAGNILLSEPGLVKLGDFGS 161 (308)
T ss_pred --CeeEEEEEccCCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCHHhEEECCCCcEEECCccc
Confidence 88999999998 67666632 2356889999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCcccc---CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSL---SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------- 272 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------- 272 (852)
+..... .....++..|+|||++. ...++.++|||||||++|+|++|..||.+....
T Consensus 162 ~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 233 (308)
T cd06634 162 ASIMAP--------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA 233 (308)
T ss_pred ceeecC--------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCC
Confidence 764321 11234677899999973 345778999999999999999999988543211
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....++..+.+++++||..+|.+||++.+++.| +|+.+
T Consensus 234 ~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~-----~~~~~ 272 (308)
T cd06634 234 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH-----RFVLR 272 (308)
T ss_pred cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC-----ccccc
Confidence 0123577889999999999999999999999997 77754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=275.30 Aligned_cols=240 Identities=17% Similarity=0.232 Sum_probs=197.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEc---CCCeEEEEEEEeC------CCchHHHHHHHHHHHhCC-CCCcceEee
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKK---GSNEKVTIFLNDS------ADTYEPALSYVKKLKTLR-HPSILTFLD 124 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k---~~g~~VaVKv~~~------~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d 124 (852)
.|++.+.|| .|+++.||.|+.. .+|..|++|++.. ....+.+.+|+++|+.++ ||||+++++
T Consensus 1 ~y~~~~~lg--------~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~ 72 (290)
T cd05613 1 NFELLKVLG--------TGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHY 72 (290)
T ss_pred Cceeeeeec--------cCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceee
Confidence 488999999 8999999999875 4789999999875 223456788999999994 999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
.++.+ ..+|+||||+. +|.+++.. ...+++..+..++.||+.||.||| +.+++||||+|+||+++.++.+|
T Consensus 73 ~~~~~--~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH-~~~i~H~dl~p~nil~~~~~~~k 145 (290)
T cd05613 73 AFQTD--TKLHLILDYINGGELFTHLSQ----RERFKEQEVQIYSGEIVLALEHLH-KLGIIYRDIKLENILLDSNGHVV 145 (290)
T ss_pred EeecC--CeEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccCCCHHHeEECCCCCEE
Confidence 99987 89999999998 68888743 356889999999999999999999 89999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccC--CCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS--HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------- 272 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~--~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------- 272 (852)
|+|||++........ .......++..|+|||.+.. ..++.++|+|||||++|+|++|..||......
T Consensus 146 l~dfg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~ 222 (290)
T cd05613 146 LTDFGLSKEFHEDEV---ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISR 222 (290)
T ss_pred EeeCccceecccccc---cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHH
Confidence 999999875432211 11123457789999999843 34677899999999999999999998532111
Q ss_pred -------cCcCCCChhHHHHHHHhccCCCCCCC-----CHHHHHHhhcCCCCCCcch
Q psy3914 273 -------SNIDNIPENLKRVYLELISERPNQRP-----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 -------~~~~~ip~~L~~li~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n~ 317 (852)
.....++..+.+++++||..+|..|| ++.+++.| +||+..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~-----~~~~~~ 274 (290)
T cd05613 223 RILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH-----PFFQKI 274 (290)
T ss_pred HhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC-----cccccC
Confidence 11235678899999999999999997 88999987 888653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=272.73 Aligned_cols=238 Identities=15% Similarity=0.173 Sum_probs=194.0
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCe----EEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE----KVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~----~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
..+|++.+.|| .|+++.||+|..+.+|. .|++|.+.... ....+.+|+.+++.++||||++++++
T Consensus 6 ~~~~~~~~~ig--------~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 77 (279)
T cd05057 6 ETELEKIKVLG--------SGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGI 77 (279)
T ss_pred HHHcEEcceec--------CCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 34689999999 99999999999887765 58888887632 34567889999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+.. ...|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.+||
T Consensus 78 ~~~---~~~~~v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH-~~~i~H~di~p~nil~~~~~~~kL 150 (279)
T cd05057 78 CLS---SQVQLITQLMPLGCLLDYVRNH---KDNIGSQYLLNWCVQIAKGMSYLE-EKRLVHRDLAARNVLVKTPQHVKI 150 (279)
T ss_pred Eec---CceEEEEecCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH-hCCEEecccCcceEEEcCCCeEEE
Confidence 875 57899999998 788888432 245889999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-----------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS----------- 271 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~----------- 271 (852)
+|||+++....... ... .....++..|+|||.+....++.++|+|||||++||+++ |..||.+...
T Consensus 151 ~dfg~~~~~~~~~~-~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~ 228 (279)
T cd05057 151 TDFGLAKLLDVDEK-EYH-AEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE 228 (279)
T ss_pred CCCcccccccCccc-cee-cCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCC
Confidence 99999875432111 111 111223457999999877778889999999999999998 9999864321
Q ss_pred -ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.......+..+..++.+||..+|..||++.++++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l 265 (279)
T cd05057 229 RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEF 265 (279)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 122344677899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=271.18 Aligned_cols=222 Identities=18% Similarity=0.214 Sum_probs=178.2
Q ss_pred cCCceEEEEEEEcCC------------CeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEE
Q psy3914 72 KHTFWKFHGGKKKGS------------NEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLA 137 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~------------g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIV 137 (852)
.|+++.||.|+.... ...|++|+++. ......+.+|+.+++.++||||+++++++..+ ...|+|
T Consensus 5 ~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~--~~~~lv 82 (262)
T cd05077 5 RGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRD--VENIMV 82 (262)
T ss_pred cCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC--CCCEEE
Confidence 899999999985322 24688998876 23344677889999999999999999999877 789999
Q ss_pred Eeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc-------EEEcccch
Q psy3914 138 VEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE-------WKLGGLEY 208 (852)
Q Consensus 138 tE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~-------~KL~DFg~ 208 (852)
|||+. +|..++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|. +||+|||+
T Consensus 83 ~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~ 158 (262)
T cd05077 83 EEFVEFGPLDLFMHR---KSDVLTTPWKFKVAKQLASALSYLE-DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGI 158 (262)
T ss_pred EecccCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhh-hCCeECCCCCcccEEEecCCccCCCCceeEeCCCCC
Confidence 99998 67777632 2356899999999999999999999 899999999999999987664 89999998
Q ss_pred hhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHH-hCCCCCCCCccc----------cCcC
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVF-NGPLQSTNRKSL----------SNID 276 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~-tG~~pf~~~~~l----------~~~~ 276 (852)
+..... .....++..|+|||++. +..++.++|||||||++|+|+ +|..|+.+.... ....
T Consensus 159 ~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 230 (262)
T cd05077 159 PITVLS--------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQCMLVT 230 (262)
T ss_pred CccccC--------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcCccCCC
Confidence 753311 11234567899999984 567888999999999999997 588887543211 1123
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
..++.+.+++.+||+.+|.+||++.+++.++
T Consensus 231 ~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 231 PSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 3467899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=268.17 Aligned_cols=237 Identities=16% Similarity=0.227 Sum_probs=193.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
..+|.+.+.|| .|+++.||.|... .+..|++|.+.. ......+.+|+++++.++||||+++++.+..
T Consensus 5 ~~~~~~~~~lg--------~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 72 (260)
T cd05073 5 RESLKLEKKLG--------AGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK--- 72 (260)
T ss_pred ccceeEEeEec--------CccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC---
Confidence 34699999999 9999999999864 556799998876 2334678899999999999999999999875
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
...|++|||+. +|.+++.+. ....++...+..++.||+.||.||| +.+++|+||+|+||+++.++.+||+|||++
T Consensus 73 ~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH-~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 149 (260)
T cd05073 73 EPIYIITEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIE-QRNYIHRDLRAANILVSASLVCKIADFGLA 149 (260)
T ss_pred CCeEEEEEeCCCCcHHHHHHhC--CccccCHHHHHHHHHHHHHHHHHHH-hCCccccccCcceEEEcCCCcEEECCCcce
Confidence 56899999997 798888432 2345788889999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcC
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNID 276 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~ 276 (852)
........ .......++..|+|||++....++.++|+|||||++|++++ |..||.+... .....
T Consensus 150 ~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 226 (260)
T cd05073 150 RVIEDNEY---TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPE 226 (260)
T ss_pred eeccCCCc---ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcc
Confidence 75432111 11112234457999999977778889999999999999998 8889854321 12345
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.+|..+.+++.+|++.+|.+||++.++++.+
T Consensus 227 ~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L 257 (260)
T cd05073 227 NCPEELYNIMMRCWKNRPEERPTFEYIQSVL 257 (260)
T ss_pred cCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence 6788999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >KOG0983|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=265.79 Aligned_cols=229 Identities=14% Similarity=0.198 Sum_probs=188.6
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCC---chHHHHHHHHHHHhC-CCCCcceEeeeEEcCCCCeEEEEEeecc-cHHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSAD---TYEPALSYVKKLKTL-RHPSILTFLDSVESPSKSLVYLAVEYVE-PIFY 146 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~~~~~yIVtE~v~-~L~~ 146 (852)
.|+.|.|++++.+.+|...|||.+.... ....+...+.++..- .+|+|++.+++|..+ ..++|.||.+. .+..
T Consensus 102 sGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n--~dV~IcMelMs~C~ek 179 (391)
T KOG0983|consen 102 SGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITN--TDVFICMELMSTCAEK 179 (391)
T ss_pred CCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeC--chHHHHHHHHHHHHHH
Confidence 8999999999999999999999998833 333455555554444 389999999999988 88999999998 4555
Q ss_pred HHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccc
Q psy3914 147 HLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRY 226 (852)
Q Consensus 147 ~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~ 226 (852)
+| ++. .+.++|..+-.+...+++||.||.+.++++||||||+||++++.|++||||||++..+.+.. .....
T Consensus 180 Ll-kri--k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk-----Ahtrs 251 (391)
T KOG0983|consen 180 LL-KRI--KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK-----AHTRS 251 (391)
T ss_pred HH-HHh--cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccc-----ccccc
Confidence 55 333 36799999999999999999999999999999999999999999999999999987654321 11234
Q ss_pred cCCCcccCCccc---cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc---------------ccCcCCCChhHHHHHHH
Q psy3914 227 EDQSTYQIPENS---LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS---------------LSNIDNIPENLKRVYLE 288 (852)
Q Consensus 227 ~gt~~Y~APE~~---~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~---------------l~~~~~ip~~L~~li~~ 288 (852)
.|-+.|||||.+ ....|+.++|+||||+.++||.||.+||.+... +..-.++++.+++++..
T Consensus 252 AGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~ 331 (391)
T KOG0983|consen 252 AGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKD 331 (391)
T ss_pred cCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHH
Confidence 566799999998 467799999999999999999999999976321 11113478899999999
Q ss_pred hccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 289 LISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 289 lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
||..|+.+||...++|+| +|..
T Consensus 332 CL~kd~r~RP~Y~~Ll~h-----~Fi~ 353 (391)
T KOG0983|consen 332 CLTKDHRKRPKYNKLLEH-----PFIK 353 (391)
T ss_pred HhhcCcccCcchHHHhcC-----ccee
Confidence 999999999999999998 6664
|
|
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=269.79 Aligned_cols=230 Identities=15% Similarity=0.134 Sum_probs=177.1
Q ss_pred cCCceEEEEEEEcC--CCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cH
Q psy3914 72 KHTFWKFHGGKKKG--SNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PI 144 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~--~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L 144 (852)
.|+|+.||.|.... ....|++|.+... .....+.+|+..++.++||||+++++.+.+. ..+|+||||+. +|
T Consensus 5 ~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~--~~~~lv~e~~~~g~L 82 (269)
T cd05042 5 NGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES--IPYLLVLEFCPLGDL 82 (269)
T ss_pred ccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC--CceEEEEEeCCCCcH
Confidence 89999999996543 3467888877652 2234577899999999999999999999887 88999999998 79
Q ss_pred HHHHHhhhh-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 145 FYHLDNTLK-ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 145 ~~~L~~~~~-~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
.+++..... .....++..+..++.||+.||.||| +.+++||||||+|||++.++.+||+|||++........ ....
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--~~~~ 159 (269)
T cd05042 83 KNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH-QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY--YITK 159 (269)
T ss_pred HHHHHhccccccccccHHHHHHHHHHHHHHHHHHH-hcCEecccccHhheEecCCCcEEEeccccccccccchh--eecc
Confidence 998854321 1233467788899999999999999 89999999999999999999999999999764221110 0011
Q ss_pred ccccCCCcccCCcccc-------CCCCCcchhHHhHHHHHHHHHh-CCCCCCCCccc-----------------cCcCCC
Q psy3914 224 SRYEDQSTYQIPENSL-------SHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKSL-----------------SNIDNI 278 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~-------~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~l-----------------~~~~~i 278 (852)
....++..|+|||++. ...++.++|||||||++|||++ |..||...... .....+
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05042 160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKY 239 (269)
T ss_pred CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccC
Confidence 1233456799999962 3456789999999999999998 77887543211 112356
Q ss_pred ChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 279 PENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 279 p~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
++.+..++..|+ .+|.+||++.++++.+
T Consensus 240 ~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 240 SDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred CHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 778888998888 5999999999998853
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-30 Score=272.75 Aligned_cols=222 Identities=18% Similarity=0.186 Sum_probs=179.7
Q ss_pred cCCceEEEEEEEcCCCe-------EEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc
Q psy3914 72 KHTFWKFHGGKKKGSNE-------KVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE 142 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~-------~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~ 142 (852)
.|+|+.||+|.++.++. .|++|.+.. ....+.+.+|+.+++.+.||||+++++++... ...|+||||+.
T Consensus 5 ~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~--~~~~lv~e~~~ 82 (258)
T cd05078 5 QGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG--DESIMVQEYVK 82 (258)
T ss_pred cccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC--CCcEEEEecCC
Confidence 89999999999876554 488888766 23345678899999999999999999999987 78999999998
Q ss_pred --cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc--------EEEcccchhhcc
Q psy3914 143 --PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE--------WKLGGLEYMEKI 212 (852)
Q Consensus 143 --~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~--------~KL~DFg~a~~~ 212 (852)
+|..++... ...+++..+..++.||+.||.||| +.+++||||||+||+++.++. ++|+|||++...
T Consensus 83 ~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH-~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 83 FGSLDTYLKKN---KNLINISWKLEVAKQLAWALHFLE-DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred CCcHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 688888432 236788999999999999999999 899999999999999988765 589999987532
Q ss_pred ccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhC-CCCCCCCcc----------ccCcCCCCh
Q psy3914 213 SEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNG-PLQSTNRKS----------LSNIDNIPE 280 (852)
Q Consensus 213 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG-~~pf~~~~~----------l~~~~~ip~ 280 (852)
.. .....++..|+|||++.+ ..++.++|+|||||++|+|++| ..|+..... ...+..++.
T Consensus 159 ~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (258)
T cd05078 159 LP--------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDRHQLPAPKWT 230 (258)
T ss_pred CC--------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHccccCCCCCcH
Confidence 21 112456778999999854 5578899999999999999998 466543221 112234557
Q ss_pred hHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 281 NLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 281 ~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.+.+++.+||+.+|++||++.++++.+
T Consensus 231 ~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 231 ELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 899999999999999999999999853
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=269.73 Aligned_cols=242 Identities=14% Similarity=0.207 Sum_probs=190.1
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcC---CCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKG---SNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~---~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
|++.+.|| .|+++.||.|..+. ++..|+||++..+ ...+.+.+|+++++.++||||+++++++..
T Consensus 1 ~~~~~~ig--------~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 72 (273)
T cd05074 1 FTLGRMLG--------KGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLR 72 (273)
T ss_pred Ccchhccc--------CCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEcc
Confidence 67788898 89999999998654 5789999998762 234567899999999999999999998865
Q ss_pred CCC----CeEEEEEeecc--cHHHHHHhhh--hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc
Q psy3914 129 PSK----SLVYLAVEYVE--PIFYHLDNTL--KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE 200 (852)
Q Consensus 129 ~~~----~~~yIVtE~v~--~L~~~L~~~~--~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~ 200 (852)
... ...++++||+. +|..++.... .....++...+..++.||+.||.||| +.+++||||||+||+++.++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH-~~~i~H~dikp~nili~~~~~ 151 (273)
T cd05074 73 SRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS-SKNFIHRDLAARNCMLNENMT 151 (273)
T ss_pred CCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCEeecccchhhEEEcCCCC
Confidence 311 13578889887 6877763221 12235788899999999999999999 899999999999999999999
Q ss_pred EEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc--------
Q psy3914 201 WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS-------- 271 (852)
Q Consensus 201 ~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~-------- 271 (852)
+||+|||+++....... ........++..|++||...+..++.++|+|||||++|+|++ |..||.+...
T Consensus 152 ~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 229 (273)
T cd05074 152 VCVADFGLSKKIYSGDY--YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLI 229 (273)
T ss_pred EEECcccccccccCCcc--eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHH
Confidence 99999999875422111 111112234567999999977788889999999999999999 7888854321
Q ss_pred ----ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 272 ----LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 272 ----l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
......++..+.+++.+||+.+|..||++.+++..+.
T Consensus 230 ~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~ 270 (273)
T cd05074 230 KGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLE 270 (273)
T ss_pred cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1122457789999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >KOG0612|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-31 Score=308.53 Aligned_cols=246 Identities=15% Similarity=0.158 Sum_probs=211.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
-.|+|.+.|| .|+||.|+.++.+.+++.||+|++++ ......++.|-.+|-.-..+-|+.++-.|++
T Consensus 75 ~DfeilKvIG--------rGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 75 EDFEILKVIG--------RGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HhhHHHHHhc--------ccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 4589999999 99999999999999999999999998 4456678888899988889999999999999
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
+ .++|+||||+. +|-.+|.+ ...+++..++.++..|+.||.-|| ..|+|||||||+||+++..|++||+||
T Consensus 147 ~--~~LYlVMdY~pGGDlltLlSk----~~~~pE~~ArFY~aEiVlAldslH-~mgyVHRDiKPDNvLld~~GHikLADF 219 (1317)
T KOG0612|consen 147 E--RYLYLVMDYMPGGDLLTLLSK----FDRLPEDWARFYTAEIVLALDSLH-SMGYVHRDIKPDNVLLDKSGHIKLADF 219 (1317)
T ss_pred c--cceEEEEecccCchHHHHHhh----cCCChHHHHHHHHHHHHHHHHHHH-hccceeccCCcceeEecccCcEeeccc
Confidence 8 99999999998 68888743 247999999999999999999999 999999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccc----cC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcc----------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENS----LS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKS---------- 271 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~----~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~---------- 271 (852)
|.|-.++.++.. .....+|||.|++||++ .+ ..|+..+|.|||||++|||+.|..||+..+.
T Consensus 220 GsClkm~~dG~V---~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~h 296 (1317)
T KOG0612|consen 220 GSCLKMDADGTV---RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNH 296 (1317)
T ss_pred hhHHhcCCCCcE---EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhch
Confidence 999877654332 23357899999999997 23 6789999999999999999999999964321
Q ss_pred ---ccCc--CCCChhHHHHHHHhccCCCCCCCC---HHHHHHhhcCCCCCCcchHHHHHH
Q psy3914 272 ---LSNI--DNIPENLKRVYLELISERPNQRPN---PADFIMRNRKPGGYFKNDLIDALL 323 (852)
Q Consensus 272 ---l~~~--~~ip~~L~~li~~lL~~nP~~Rps---~~elL~~l~~~~~fF~n~lv~~l~ 323 (852)
+..+ -.|+...+++|++++. +|..|.. +.+|..| +||.+.-...++
T Consensus 297 k~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H-----pFF~g~~W~~iR 350 (1317)
T KOG0612|consen 297 KESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH-----PFFEGIDWDNIR 350 (1317)
T ss_pred hhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC-----ccccCCChhhhh
Confidence 2222 4688999999999885 6777877 9999997 999987766553
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=274.90 Aligned_cols=237 Identities=12% Similarity=0.130 Sum_probs=191.2
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCe----EEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE----KVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~----~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
..|++.+.|| .|+++.||.|.++.+|. .|++|.+.... ....+.+|+.+++.++||||+++++.+
T Consensus 7 ~~~~~~~~lg--------~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~ 78 (303)
T cd05110 7 TELKRVKVLG--------SGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVC 78 (303)
T ss_pred hhceeccccc--------cCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEE
Confidence 4588899999 99999999999987776 56888877622 223578899999999999999999998
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
... ..++++||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++|+||||+||+++.++.+||+
T Consensus 79 ~~~---~~~~v~e~~~~g~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~LH-~~~ivH~dikp~Nill~~~~~~kL~ 151 (303)
T cd05110 79 LSP---TIQLVTQLMPHGCLLDYVHE---HKDNIGSQLLLNWCVQIAKGMMYLE-ERRLVHRDLAARNVLVKSPNHVKIT 151 (303)
T ss_pred cCC---CceeeehhcCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHh-hcCeeccccccceeeecCCCceEEc
Confidence 753 4778999998 68888742 2246788899999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------ 271 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------ 271 (852)
|||++......... .......++..|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 152 Dfg~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~ 229 (303)
T cd05110 152 DFGLARLLEGDEKE--YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGER 229 (303)
T ss_pred cccccccccCcccc--cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC
Confidence 99998754321111 11112334568999999987888999999999999999997 8888854311
Q ss_pred ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......++..+..++.+|+..+|..||++.++++.+
T Consensus 230 ~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l 265 (303)
T cd05110 230 LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEF 265 (303)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 112345678899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-29 Score=272.79 Aligned_cols=241 Identities=8% Similarity=0.025 Sum_probs=185.6
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCC---CeEEEEEEEeCCCch-------------HHHHHHHHHHHhCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS---NEKVTIFLNDSADTY-------------EPALSYVKKLKTLRH 116 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~---g~~VaVKv~~~~~~~-------------~~~~~E~~~Lk~LrH 116 (852)
..+|.+++.|| .|+||+||+|....+ +..+++|+....... .....++..+..+.|
T Consensus 11 ~~~y~i~~~LG--------~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h 82 (294)
T PHA02882 11 GKEWKIDKLIG--------CGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDH 82 (294)
T ss_pred CCceEEeeEEe--------cCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCC
Confidence 45799999999 999999999999877 667777765441110 111233345567789
Q ss_pred CCcceEeeeEEcCCC--CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCE
Q psy3914 117 PSILTFLDSVESPSK--SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSI 193 (852)
Q Consensus 117 PnIlk~~d~~e~~~~--~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NI 193 (852)
+||+++++....... ...|+++|++. .+.+.+... ...++..+..++.||+.||.||| +.+++||||||+||
T Consensus 83 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH-~~~iiHrDiKp~Ni 157 (294)
T PHA02882 83 LGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI----KCKNKKLIKNIMKDMLTTLEYIH-EHGISHGDIKPENI 157 (294)
T ss_pred CCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh----ccCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHE
Confidence 999999987654311 24578888876 566665321 33567888999999999999999 89999999999999
Q ss_pred EEccCCcEEEcccchhhccccccCC---CCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc
Q psy3914 194 FINSCGEWKLGGLEYMEKISEASCI---PMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK 270 (852)
Q Consensus 194 lV~~~g~~KL~DFg~a~~~~~~~~~---~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~ 270 (852)
+++.++.++|+|||+++.+...... .........||+.|+|||+..+..++.++|||||||++|||++|.+||.+..
T Consensus 158 ll~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~ 237 (294)
T PHA02882 158 MVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFG 237 (294)
T ss_pred EEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccc
Confidence 9999999999999998755321111 0111123468999999999988889999999999999999999999996542
Q ss_pred cc-------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 271 SL-------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 271 ~l-------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.. ..+...|+.+.++++.|+..+|.+||++.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~ 292 (294)
T PHA02882 238 HNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKI 292 (294)
T ss_pred cchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHh
Confidence 11 1235678899999999999999999999999874
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=272.18 Aligned_cols=242 Identities=17% Similarity=0.205 Sum_probs=194.9
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEc---CCCeEEEEEEEeC------CCchHHHHHHHHHHHhCC-CCCcceEee
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKK---GSNEKVTIFLNDS------ADTYEPALSYVKKLKTLR-HPSILTFLD 124 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k---~~g~~VaVKv~~~------~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d 124 (852)
.|++.+.|| .|+++.||.++.. .++..|+||++.. ......+.+|++++.+++ ||||+++++
T Consensus 1 ~~~~~~~ig--------~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~ 72 (288)
T cd05583 1 NFELLRVLG--------TGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHY 72 (288)
T ss_pred CceEEEEec--------cCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhhe
Confidence 388999999 8999999999864 4678999999875 223456788999999994 999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
.++.. ..+|+||||+. +|..++.. ...+++..+..++.|++.+|.||| +.+++||||+|.||+++.++.++
T Consensus 73 ~~~~~--~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH-~~~~~H~dl~p~nil~~~~~~~~ 145 (288)
T cd05583 73 AFQTD--TKLHLILDYVNGGELFTHLYQ----REHFTESEVRVYIAEIVLALDHLH-QLGIIYRDIKLENILLDSEGHVV 145 (288)
T ss_pred eeecC--CEEEEEEecCCCCcHHHHHhh----cCCcCHHHHHHHHHHHHHHHHHHH-HCCeeccCCCHHHeEECCCCCEE
Confidence 99887 89999999998 68877732 256889999999999999999999 89999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccCCC--CCcchhHHhHHHHHHHHHhCCCCCCCCcc---------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHV--TKCSTDMYGLGILIWEVFNGPLQSTNRKS--------- 271 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~--~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------- 271 (852)
|+|||++..+.... ........++..|++||.+.+.. .+.++|+||||+++|+|++|..||.....
T Consensus 146 l~dfg~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 222 (288)
T cd05583 146 LTDFGLSKEFLAEE---EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISR 222 (288)
T ss_pred EEECcccccccccc---ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHH
Confidence 99999976432211 11112345678999999984433 67889999999999999999999843211
Q ss_pred ------ccCcCCCChhHHHHHHHhccCCCCCCCCHH---HHHHhhcCCCCCCcchHH
Q psy3914 272 ------LSNIDNIPENLKRVYLELISERPNQRPNPA---DFIMRNRKPGGYFKNDLI 319 (852)
Q Consensus 272 ------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~---elL~~l~~~~~fF~n~lv 319 (852)
......++..+.+++.+||+.+|+.|||+. ++++| +||++...
T Consensus 223 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~-----~~~~~~~~ 274 (288)
T cd05583 223 RILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH-----PFFQGIDW 274 (288)
T ss_pred HHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC-----cccccCCH
Confidence 112345788999999999999999999854 45555 89887543
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=271.16 Aligned_cols=222 Identities=17% Similarity=0.178 Sum_probs=177.0
Q ss_pred cCCceEEEEEEEcCC------------------------CeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 72 KHTFWKFHGGKKKGS------------------------NEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~------------------------g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
+|+|+.||+|....+ ...|++|+++. ......+.+|+.+++.++||||++++++
T Consensus 5 ~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~ 84 (274)
T cd05076 5 QGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFVHGV 84 (274)
T ss_pred cccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeEEEE
Confidence 899999999985322 24688888876 2223457788899999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC----
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG---- 199 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g---- 199 (852)
+... ...|+||||+. +|..++.+ ..+.+++..+..++.||+.||.||| +.+++||||||+||+++..|
T Consensus 85 ~~~~--~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH-~~~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 85 CVRG--SENIMVEEFVEHGPLDVCLRK---EKGRVPVAWKITVAQQLASALSYLE-DKNLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred EEeC--CceEEEEecCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH-cCCccCCCCCcccEEEeccCcccC
Confidence 9987 88999999998 68777732 2357889999999999999999999 89999999999999998654
Q ss_pred ---cEEEcccchhhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHH-hCCCCCCCCccc--
Q psy3914 200 ---EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVF-NGPLQSTNRKSL-- 272 (852)
Q Consensus 200 ---~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~-tG~~pf~~~~~l-- 272 (852)
.+||+|||++...... ....++..|+|||.+. ...++.++|+|||||++||++ +|..||.+....
T Consensus 159 ~~~~~kl~d~g~~~~~~~~--------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 230 (274)
T cd05076 159 TSPFIKLSDPGVSFTALSR--------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK 230 (274)
T ss_pred ccceeeecCCccccccccc--------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH
Confidence 3899999987532111 1224566899999884 466788999999999999984 688888543211
Q ss_pred --------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 273 --------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 273 --------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......++.+.+++.+||+.+|.+||++.++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 231 ERFYEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 12233456799999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-29 Score=267.15 Aligned_cols=230 Identities=15% Similarity=0.139 Sum_probs=178.9
Q ss_pred cCCceEEEEEEEcC--CCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cH
Q psy3914 72 KHTFWKFHGGKKKG--SNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PI 144 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~--~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L 144 (852)
.|++|.||+|.... ++..+++|.+.... ....+.+|+..++.++||||+++++.+.+. ..+|+||||+. +|
T Consensus 5 ~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~g~L 82 (269)
T cd05087 5 NGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV--TPYLLVMEFCPLGDL 82 (269)
T ss_pred ccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC--CCcEEEEECCCCCcH
Confidence 89999999998653 45789999887622 224678899999999999999999999877 88999999998 79
Q ss_pred HHHHHhhhh-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccc
Q psy3914 145 FYHLDNTLK-ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 145 ~~~L~~~~~-~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
.+++..... .....+...+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++........ ....
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~--~~~~ 159 (269)
T cd05087 83 KGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH-KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY--YVTP 159 (269)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH-HCCEeccccCcceEEEcCCCcEEECCccccccccCcce--eecC
Confidence 888854322 2234566778889999999999999 89999999999999999999999999999864322111 1111
Q ss_pred ccccCCCcccCCccccC-------CCCCcchhHHhHHHHHHHHHh-CCCCCCCCccc-----------------cCcCCC
Q psy3914 224 SRYEDQSTYQIPENSLS-------HVTKCSTDMYGLGILIWEVFN-GPLQSTNRKSL-----------------SNIDNI 278 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~-------~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~l-----------------~~~~~i 278 (852)
....++..|+|||++.+ ..++.++|+|||||++|||++ |..||...... ......
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPL 239 (269)
T ss_pred CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCC
Confidence 22445678999999742 235779999999999999996 99898532111 011245
Q ss_pred ChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 279 PENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 279 p~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
++.+.+++.+|+ .+|.+||++.+++..+
T Consensus 240 ~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l 267 (269)
T cd05087 240 SDRWYEVMQFCW-LQPEQRPSAEEVHLLL 267 (269)
T ss_pred ChHHHHHHHHHh-cCcccCCCHHHHHHHh
Confidence 678899999998 6899999999998753
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >KOG1035|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-30 Score=303.74 Aligned_cols=239 Identities=20% Similarity=0.279 Sum_probs=184.8
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC--
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESP-- 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~-- 129 (852)
.|+..+.+| .|+||.||+++++-||..||||++.. ......+.+|++.|.+|+|||||+|+..+.+.
T Consensus 480 DFEEL~lLG--------kGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~ 551 (1351)
T KOG1035|consen 480 DFEELELLG--------KGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTA 551 (1351)
T ss_pred hhHHHHHhc--------CCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCC
Confidence 466678898 99999999999999999999999987 34556789999999999999999998755221
Q ss_pred ----------------------------------------------------C---------------------------
Q psy3914 130 ----------------------------------------------------S--------------------------- 130 (852)
Q Consensus 130 ----------------------------------------------------~--------------------------- 130 (852)
+
T Consensus 552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S 631 (1351)
T KOG1035|consen 552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS 631 (1351)
T ss_pred ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence 0
Q ss_pred ----------------------------C--------CeEEEEEeecc-c-HHHHHHhhhhcCCCC-CHHHHHHHHHHHH
Q psy3914 131 ----------------------------K--------SLVYLAVEYVE-P-IFYHLDNTLKENNEK-KQIYISWGIFQIT 171 (852)
Q Consensus 131 ----------------------------~--------~~~yIVtE~v~-~-L~~~L~~~~~~~~~l-~e~~i~~~l~QI~ 171 (852)
. .++||-||||+ . |.+++++. ... .....+.++.||+
T Consensus 632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N----~~~~~~d~~wrLFreIl 707 (1351)
T KOG1035|consen 632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRN----HFNSQRDEAWRLFREIL 707 (1351)
T ss_pred cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhc----ccchhhHHHHHHHHHHH
Confidence 0 35899999999 4 55555321 111 4667889999999
Q ss_pred HHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccc------ccc--------CCCCcccccccCCCcccCCcc
Q psy3914 172 RALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKIS------EAS--------CIPMKRYSRYEDQSTYQIPEN 237 (852)
Q Consensus 172 ~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~------~~~--------~~~~~~~~~~~gt~~Y~APE~ 237 (852)
+||.|+| +.|||||||||.|||+++++.+||||||+++... +.. ..........+||.-|+|||+
T Consensus 708 EGLaYIH-~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEl 786 (1351)
T KOG1035|consen 708 EGLAYIH-DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPEL 786 (1351)
T ss_pred HHHHHHH-hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHH
Confidence 9999999 8999999999999999999999999999998621 100 111113345789999999999
Q ss_pred ccC---CCCCcchhHHhHHHHHHHHHhCCCCCCCC-------ccccCcCCCCh----------hHHHHHHHhccCCCCCC
Q psy3914 238 SLS---HVTKCSTDMYGLGILIWEVFNGPLQSTNR-------KSLSNIDNIPE----------NLKRVYLELISERPNQR 297 (852)
Q Consensus 238 ~~~---~~~~~~sDIwSLG~ll~el~tG~~pf~~~-------~~l~~~~~ip~----------~L~~li~~lL~~nP~~R 297 (852)
+.+ ..|+.++||||||++++||+. ||... ..++ -..||. .-..+|+.|++.||.+|
T Consensus 787 l~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR-~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kR 862 (1351)
T KOG1035|consen 787 LSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLR-KGSIPEPADFFDPEHPEEASLIRWLLSHDPSKR 862 (1351)
T ss_pred hcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcc-cCCCCCCcccccccchHHHHHHHHHhcCCCccC
Confidence 833 359999999999999999985 35211 0111 112222 24579999999999999
Q ss_pred CCHHHHHHhhcCCCCCCc
Q psy3914 298 PNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 298 ps~~elL~~l~~~~~fF~ 315 (852)
||+.++|+. .+|-
T Consensus 863 PtA~eLL~s-----~llp 875 (1351)
T KOG1035|consen 863 PTATELLNS-----ELLP 875 (1351)
T ss_pred CCHHHHhhc-----cCCC
Confidence 999999996 6665
|
|
| >KOG0669|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-32 Score=272.52 Aligned_cols=256 Identities=16% Similarity=0.218 Sum_probs=207.3
Q ss_pred ccccccccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCC
Q psy3914 40 PKMWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLR 115 (852)
Q Consensus 40 ~~m~~~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~Lr 115 (852)
++|...|++. ...|+-..++| +|.|+.||+|+.+.+|+.|++|+.-. +..-..+.+|+++|..|+
T Consensus 6 ~s~~~P~~~~---~~~yek~~kig--------qGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lk 74 (376)
T KOG0669|consen 6 DSMYEPFCDE---VSKYEKLAKIG--------QGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLK 74 (376)
T ss_pred hcccCCceec---chHHHHHHhcC--------CchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhc
Confidence 3455556653 33478788899 99999999999999999999885422 556678899999999999
Q ss_pred CCCcceEeeeEEcC------CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceeccc
Q psy3914 116 HPSILTFLDSVESP------SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHV 188 (852)
Q Consensus 116 HPnIlk~~d~~e~~------~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DI 188 (852)
|+|++.+++.+... .+..+|+|+.+|+ +|..+|.+ ...+++..+|+.++.+++.||.|+| ...|+|||+
T Consensus 75 Henv~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn---~~vr~sls~Ikk~Mk~Lm~GL~~iH-r~kilHRDm 150 (376)
T KOG0669|consen 75 HENVVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLSN---RKVRFSLSEIKKVMKGLMNGLYYIH-RNKILHRDM 150 (376)
T ss_pred chhHHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhcC---ccccccHHHHHHHHHHHHHHHHHHH-HhhHHhhcc
Confidence 99999999887543 2356999999999 89888842 3367899999999999999999999 999999999
Q ss_pred CCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCC
Q psy3914 189 NHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQST 267 (852)
Q Consensus 189 kp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~ 267 (852)
|+.|++|+.+|.+||+|||+++.+.........++...+.|..|++||.+ ....|+.+.|||+-||++.||+++.+.+.
T Consensus 151 KaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimq 230 (376)
T KOG0669|consen 151 KAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQ 230 (376)
T ss_pred cHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCcccc
Confidence 99999999999999999999975443222223345567789999999998 66789999999999999999999998887
Q ss_pred CCccccCc-------------------------------------CCC---------ChhHHHHHHHhccCCCCCCCCHH
Q psy3914 268 NRKSLSNI-------------------------------------DNI---------PENLKRVYLELISERPNQRPNPA 301 (852)
Q Consensus 268 ~~~~l~~~-------------------------------------~~i---------p~~L~~li~~lL~~nP~~Rps~~ 301 (852)
++....++ ..+ .++..+++.+||..||.+|+.++
T Consensus 231 gnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad 310 (376)
T KOG0669|consen 231 GNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDAD 310 (376)
T ss_pred CChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchH
Confidence 65332210 111 12466899999999999999999
Q ss_pred HHHHhhcCCCCCCc
Q psy3914 302 DFIMRNRKPGGYFK 315 (852)
Q Consensus 302 elL~~l~~~~~fF~ 315 (852)
+.+.| .||.
T Consensus 311 ~alnh-----~~F~ 319 (376)
T KOG0669|consen 311 QALNH-----DFFW 319 (376)
T ss_pred hhhch-----hhhh
Confidence 99998 6664
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-29 Score=263.95 Aligned_cols=221 Identities=13% Similarity=0.163 Sum_probs=182.7
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLD 149 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~ 149 (852)
-|.++.||.+.++.+++.|++|.+.... ...++...+....||||+++++++.+. ...|+||||+. +|.+++.
T Consensus 3 ~g~~~~v~~~~~~~~~~~~~~K~i~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~ 77 (237)
T cd05576 3 LGVIDKVLLVMDTRTQQTFILKGLRKSS---EYSRERLTIIPHCVPNMVCLHKYIVSE--DSVFLVLQHAEGGKLWSHIS 77 (237)
T ss_pred ccccceEEEEEEccCCcEEEEEeecchh---hhhhHHHHHHhcCCCceeehhhheecC--CeEEEEEecCCCCCHHHHHH
Confidence 4788999999999999999999998632 234455566667899999999999987 89999999998 7888874
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCC
Q psy3914 150 NTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQ 229 (852)
Q Consensus 150 ~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt 229 (852)
+. ..+++..+..++.|++.||.||| +.+++||||||+||+++.+|.++|+|||.+....... ....++
T Consensus 78 ~~----~~l~~~~~~~~~~ql~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-------~~~~~~ 145 (237)
T cd05576 78 KF----LNIPEECVKRWAAEMVVALDALH-REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-------DGEAVE 145 (237)
T ss_pred Hh----cCCCHHHHHHHHHHHHHHHHHHH-hCCeeccCCCHHHEEEcCCCCEEEecccchhcccccc-------ccCCcC
Confidence 32 45899999999999999999999 8999999999999999999999999999876443211 122345
Q ss_pred CcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-------cccCcCCCChhHHHHHHHhccCCCCCCCCH--
Q psy3914 230 STYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK-------SLSNIDNIPENLKRVYLELISERPNQRPNP-- 300 (852)
Q Consensus 230 ~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~-------~l~~~~~ip~~L~~li~~lL~~nP~~Rps~-- 300 (852)
..|+|||...+..++.++|+||+||++|+|++|..++.... .......+++.+.+++.+||+.||.+|+++
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGINTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCc
Confidence 57999999877778889999999999999999987764221 122345678889999999999999999985
Q ss_pred ---HHHHHhhcCCCCCC
Q psy3914 301 ---ADFIMRNRKPGGYF 314 (852)
Q Consensus 301 ---~elL~~l~~~~~fF 314 (852)
.++++| +||
T Consensus 226 ~~~~~~~~h-----~~~ 237 (237)
T cd05576 226 AGVEDIKSH-----PFF 237 (237)
T ss_pred cchHHHHcC-----CCC
Confidence 888887 776
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-29 Score=262.23 Aligned_cols=221 Identities=16% Similarity=0.147 Sum_probs=178.7
Q ss_pred cCCceEEEEEEEcCCC----------eEEEEEEEeCCCc-hHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEee
Q psy3914 72 KHTFWKFHGGKKKGSN----------EKVTIFLNDSADT-YEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEY 140 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g----------~~VaVKv~~~~~~-~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~ 140 (852)
.|+++.||+|..+.++ ..|++|++..... ...+.+|+.+++.++||||+++++++.. ...|+||||
T Consensus 5 ~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~lv~e~ 81 (259)
T cd05037 5 QGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR---DENIMVEEY 81 (259)
T ss_pred ccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec---CCcEEEEEc
Confidence 8999999999998776 4588888776222 6778899999999999999999998876 357999999
Q ss_pred cc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC-------cEEEcccchhhc
Q psy3914 141 VE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG-------EWKLGGLEYMEK 211 (852)
Q Consensus 141 v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g-------~~KL~DFg~a~~ 211 (852)
+. +|.+++... ...++...+..++.||+.||.||| +.+++||||||+||+++.++ .+||+|||++..
T Consensus 82 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH-~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 82 VKFGPLDVFLHRE---KNNVSLHWKLDVAKQLASALHYLE-DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred CCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHh-hCCeecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 98 788888432 126889999999999999999999 89999999999999999888 799999999874
Q ss_pred cccccCCCCcccccccCCCcccCCccccCC--CCCcchhHHhHHHHHHHHHh-CCCCCCCCcccc----------CcCCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSH--VTKCSTDMYGLGILIWEVFN-GPLQSTNRKSLS----------NIDNI 278 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~--~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~l~----------~~~~i 278 (852)
... .....++..|+|||++.+. .++.++|+|||||++|+|++ |..|+....... .....
T Consensus 158 ~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 229 (259)
T cd05037 158 VLS--------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQHRLPMPD 229 (259)
T ss_pred ccc--------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCCCCCCCC
Confidence 322 1123345589999998554 78889999999999999999 577774332110 01112
Q ss_pred ChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 279 PENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 279 p~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
...+.+++.+||..+|.+||++.++++.+
T Consensus 230 ~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 230 CAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred chHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 36899999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=264.32 Aligned_cols=230 Identities=14% Similarity=0.128 Sum_probs=177.0
Q ss_pred cCCceEEEEEEEcCCC--eEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cH
Q psy3914 72 KHTFWKFHGGKKKGSN--EKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PI 144 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g--~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L 144 (852)
.|+++.||.|....++ ..+++|.+... .....+.+|+..++.++||||+++++.+... ...|+||||+. +|
T Consensus 5 ~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~~~L 82 (268)
T cd05086 5 NGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEA--IPYLLVFEYCELGDL 82 (268)
T ss_pred CCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCC--CccEEEEecCCCCcH
Confidence 8999999999764333 45667776652 2346788999999999999999999999987 88999999998 79
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccc
Q psy3914 145 FYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYS 224 (852)
Q Consensus 145 ~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~ 224 (852)
.+++.+........+...+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||++........ .....
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH-~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~--~~~~~ 159 (268)
T cd05086 83 KSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH-KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY--IETED 159 (268)
T ss_pred HHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH-HCCeeccCCccceEEEcCCccEEecccccccccCcchh--hhccc
Confidence 9988543323345677788899999999999999 89999999999999999999999999998753211100 11112
Q ss_pred cccCCCcccCCccccC-------CCCCcchhHHhHHHHHHHHHh-CCCCCCCCccc-----------------cCcCCCC
Q psy3914 225 RYEDQSTYQIPENSLS-------HVTKCSTDMYGLGILIWEVFN-GPLQSTNRKSL-----------------SNIDNIP 279 (852)
Q Consensus 225 ~~~gt~~Y~APE~~~~-------~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~l-----------------~~~~~ip 279 (852)
...++..|+|||++.. ..++.++|+|||||++|||++ |..||...... .....++
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (268)
T cd05086 160 DKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYS 239 (268)
T ss_pred CCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCc
Confidence 3456778999999732 235678999999999999997 46677432211 1123457
Q ss_pred hhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 280 ENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 280 ~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+.+..++..|+ .+|.+||++.++++.+
T Consensus 240 ~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 240 ERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred HHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 77889999999 6899999999998753
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >KOG1026|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-30 Score=296.99 Aligned_cols=239 Identities=18% Similarity=0.215 Sum_probs=200.0
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCC-----CeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS-----NEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~-----g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
-++.+.+| .|.||.||.|....- ...|+||.++. ......+++|+.+|..|+|||||++++++.
T Consensus 488 i~~~~eLG--------egaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~ 559 (774)
T KOG1026|consen 488 IVFKEELG--------EGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCR 559 (774)
T ss_pred eeehhhhc--------CchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence 35578899 999999999987432 37899999987 225578999999999999999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhh------c----CCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLK------E----NNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI 195 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~------~----~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV 195 (852)
.+ +.+|+|+||+. +|.++|..... . ...++..+...++.||+.|+.||- ..++|||||-..|++|
T Consensus 560 ~~--~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs-~~~FVHRDLATRNCLV 636 (774)
T KOG1026|consen 560 EG--DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS-SHHFVHRDLATRNCLV 636 (774)
T ss_pred cC--CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hCcccccchhhhhcee
Confidence 88 99999999999 89999963211 1 234889999999999999999999 9999999999999999
Q ss_pred ccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc---
Q psy3914 196 NSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS--- 271 (852)
Q Consensus 196 ~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~--- 271 (852)
.++-.+||+|||+++.+= +...++......-..+|||||.+.-..++..+||||+||++||+|+ |..|+.+..+
T Consensus 637 ge~l~VKIsDfGLsRdiY--ssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV 714 (774)
T KOG1026|consen 637 GENLVVKISDFGLSRDIY--SSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV 714 (774)
T ss_pred ccceEEEecccccchhhh--hhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH
Confidence 999999999999998431 1111222212223459999999988899999999999999999998 7889875432
Q ss_pred ---------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 ---------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 ---------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+..+.++|.++..++.+||+.+|++||++.+|-..+
T Consensus 715 Ie~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L 759 (774)
T KOG1026|consen 715 IECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRL 759 (774)
T ss_pred HHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence 455789999999999999999999999999997664
|
|
| >KOG1187|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-29 Score=278.12 Aligned_cols=235 Identities=18% Similarity=0.225 Sum_probs=187.8
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCc--hHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC-
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADT--YEPALSYVKKLKTLRHPSILTFLDSVESPSKS- 132 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~--~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~- 132 (852)
|.-...|| .|+||.||+|... +|..||||.++.... ...+.+|+.+|.+++|||+++++++|.+. +
T Consensus 77 Fs~~~~ig--------~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~--~~ 145 (361)
T KOG1187|consen 77 FSESNLIG--------EGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEG--GE 145 (361)
T ss_pred Cchhccee--------cCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecC--Cc
Confidence 44446788 8999999999996 448999998887332 45699999999999999999999999987 6
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC--ceecccCCCCEEEccCCcEEEcccch
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDAD--LRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~--ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..++|+||+. +|.++|...... .+++.....|+.++++||.|||+.+. |||||||++|||+|++...||+|||+
T Consensus 146 ~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGL 223 (361)
T KOG1187|consen 146 HRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGL 223 (361)
T ss_pred eEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccC
Confidence 5999999999 799998532211 78999999999999999999997675 99999999999999999999999999
Q ss_pred hhccccccCCCCcccccc-cCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc---c--c----------
Q psy3914 209 MEKISEASCIPMKRYSRY-EDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK---S--L---------- 272 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~-~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~---~--l---------- 272 (852)
++..... ....... .||..|++||+......+.++||||||+++.|+++|+.+..... . +
T Consensus 224 a~~~~~~----~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~ 299 (361)
T KOG1187|consen 224 AKLGPEG----DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE 299 (361)
T ss_pred cccCCcc----ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence 8643210 1111112 78999999999977888999999999999999999987654211 0 0
Q ss_pred -------c-Cc--CCCC--hh---HHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 273 -------S-NI--DNIP--EN---LKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 273 -------~-~~--~~ip--~~---L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+ .+ ...+ .. +..+..+|++.+|..||++.++++.+
T Consensus 300 ~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L 349 (361)
T KOG1187|consen 300 GKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKEL 349 (361)
T ss_pred cchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHH
Confidence 0 01 2334 23 44566789999999999999987764
|
|
| >KOG0986|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-30 Score=278.52 Aligned_cols=253 Identities=17% Similarity=0.245 Sum_probs=218.6
Q ss_pred ccccccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCC
Q psy3914 42 MWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRH 116 (852)
Q Consensus 42 m~~~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrH 116 (852)
.|.++...|.....|..-+.+| .|+||.||-+..+.||+-+|.|.+++ ......+.+|-++|.++..
T Consensus 173 QWK~lE~qpvt~n~F~~~RvlG--------kGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s 244 (591)
T KOG0986|consen 173 QWKWLELQPVTKNTFRVYRVLG--------KGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSS 244 (591)
T ss_pred HHHHHHhhhccccceeeeEEEe--------cccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhcc
Confidence 4777888888888889999999 99999999999999999999999887 4455678999999999999
Q ss_pred CCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEE
Q psy3914 117 PSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIF 194 (852)
Q Consensus 117 PnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIl 194 (852)
|.|+.+--.|++. +.+|+|+..+. +|.-+|.+. .+..+++..+..+..+|+.||.+|| ..+||+||+||+||+
T Consensus 245 ~FiVslaYAfeTk--d~LClVLtlMNGGDLkfHiyn~--g~~gF~e~ra~FYAAEi~cGLehlH-~~~iVYRDLKPeNIL 319 (591)
T KOG0986|consen 245 PFIVSLAYAFETK--DALCLVLTLMNGGDLKFHIYNH--GNPGFDEQRARFYAAEIICGLEHLH-RRRIVYRDLKPENIL 319 (591)
T ss_pred CcEEEEeeeecCC--CceEEEEEeecCCceeEEeecc--CCCCCchHHHHHHHHHHHhhHHHHH-hcceeeccCChhhee
Confidence 9999999999977 99999999998 787777443 2368999999999999999999999 899999999999999
Q ss_pred EccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCC-----
Q psy3914 195 INSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNR----- 269 (852)
Q Consensus 195 V~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~----- 269 (852)
+|+.|+++|+|+|++..+.+.. + ....+||..|||||++.+..|+.+.|.|||||+||||+.|.-||...
T Consensus 320 LDd~GhvRISDLGLAvei~~g~--~---~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk 394 (591)
T KOG0986|consen 320 LDDHGHVRISDLGLAVEIPEGK--P---IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK 394 (591)
T ss_pred eccCCCeEeeccceEEecCCCC--c---cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh
Confidence 9999999999999998764422 2 22458999999999998888999999999999999999999999532
Q ss_pred ----------ccccCcCCCChhHHHHHHHhccCCCCCCCC-----HHHHHHhhcCCCCCCcch
Q psy3914 270 ----------KSLSNIDNIPENLKRVYLELISERPNQRPN-----PADFIMRNRKPGGYFKND 317 (852)
Q Consensus 270 ----------~~l~~~~~ip~~L~~li~~lL~~nP~~Rps-----~~elL~~l~~~~~fF~n~ 317 (852)
...+...+++++.+++.+.+|..||.+|.. ++++.+| +||++.
T Consensus 395 ~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H-----pfFk~l 452 (591)
T KOG0986|consen 395 REEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH-----PFFKDL 452 (591)
T ss_pred HHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC-----cccccC
Confidence 222345788999999999999999999974 4567666 899873
|
|
| >KOG4250|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=287.33 Aligned_cols=201 Identities=19% Similarity=0.275 Sum_probs=176.7
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
....+...+.+| .|+||.||+|+++.+|+.||||.++. ....+..-+|+++|++|+||||++++++-++
T Consensus 11 ~~y~W~~~e~LG--------~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~ 82 (732)
T KOG4250|consen 11 ENYLWEMDERLG--------KGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEET 82 (732)
T ss_pred CCcceeehhhhc--------CCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCc
Confidence 345677789999 99999999999999999999999998 4567788999999999999999999998877
Q ss_pred CC----CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC--C-
Q psy3914 129 PS----KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC--G- 199 (852)
Q Consensus 129 ~~----~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~--g- 199 (852)
.. .....+|||||. +|..+| +.......+++.++..++..++.||.||| ++||+||||||.||++-.. |
T Consensus 83 ~~~~~~~~~~vlvmEyC~gGsL~~~L-~~PEN~~GLpE~e~l~lL~d~~~al~~Lr-En~IvHRDlKP~NIvl~~Gedgq 160 (732)
T KOG4250|consen 83 KFLGLVTRLPVLVMEYCSGGSLRKVL-NSPENAYGLPESEFLDLLSDLVSALRHLR-ENGIVHRDLKPGNIVLQIGEDGQ 160 (732)
T ss_pred cccCcccccceEEEeecCCCcHHHHh-cCcccccCCCHHHHHHHHHHHHHHHHHHH-HcCceeccCCCCcEEEeecCCCc
Confidence 63 345789999999 799999 44455678999999999999999999999 9999999999999998653 3
Q ss_pred -cEEEcccchhhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCC
Q psy3914 200 -EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQST 267 (852)
Q Consensus 200 -~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~ 267 (852)
.-||+|||+++.++++. ...++.||..|.+||++. ...|+..+|.|||||++|++.||.+||.
T Consensus 161 ~IyKLtDfG~Arel~d~s-----~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 161 SIYKLTDFGAARELDDNS-----LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred eEEeeecccccccCCCCC-----eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence 38999999999776643 445789999999999995 5889999999999999999999999994
|
|
| >KOG4257|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=273.68 Aligned_cols=230 Identities=17% Similarity=0.228 Sum_probs=194.2
Q ss_pred eccccCCCCCCcccCCceEEEEEEEcCC----CeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 59 GEPAVSFSGCFTQKHTFWKFHGGKKKGS----NEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 59 ~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~----g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
++.|| .|.||.||.|+...- .-.||||+.+. ....+.+..|..+|+.++||||+++++++.+
T Consensus 394 ~r~iG--------~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e--- 462 (974)
T KOG4257|consen 394 KRLIG--------EGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE--- 462 (974)
T ss_pred HHhhc--------CCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec---
Confidence 56677 899999999986432 45789999887 3457889999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
...+||||.+. .|..||+. ....++...+..+++||+.||.||| +.++|||||-..||+|.....+||+|||++
T Consensus 463 ~P~WivmEL~~~GELr~yLq~---nk~sL~l~tL~ly~~Qi~talaYLe-SkrfVHRDIAaRNiLVsSp~CVKLaDFGLS 538 (974)
T KOG4257|consen 463 QPMWIVMELAPLGELREYLQQ---NKDSLPLRTLTLYCYQICTALAYLE-SKRFVHRDIAARNILVSSPQCVKLADFGLS 538 (974)
T ss_pred cceeEEEecccchhHHHHHHh---ccccchHHHHHHHHHHHHHHHHHHH-hhchhhhhhhhhheeecCcceeeecccchh
Confidence 47999999998 69999953 3367888999999999999999999 999999999999999999999999999999
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCc------------cccCcC
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRK------------SLSNID 276 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~------------~l~~~~ 276 (852)
+-+.+.... ..+...-...|||||.+.-..++.++|+|.||+++||++. |..||.|-. .+.-+.
T Consensus 539 R~~ed~~yY---kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~ 615 (974)
T KOG4257|consen 539 RYLEDDAYY---KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPP 615 (974)
T ss_pred hhccccchh---hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCC
Confidence 876553221 1111222348999999987888999999999999999987 889996532 233467
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
++|+.|..++.+||..+|.+||++.++...
T Consensus 616 nCPp~LYslmskcWayeP~kRPrftei~~~ 645 (974)
T KOG4257|consen 616 NCPPALYSLMSKCWAYEPSKRPRFTEIKAI 645 (974)
T ss_pred CCChHHHHHHHHHhccCcccCCcHHHHHHH
Confidence 999999999999999999999999999775
|
|
| >KOG1095|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.8e-29 Score=297.28 Aligned_cols=238 Identities=15% Similarity=0.243 Sum_probs=199.7
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCe-----EEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE-----KVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~-----~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
-++++.|| .|.||.||.|....-.. .|+||.+.. ......+.+|..+|+.++||||+++++++.
T Consensus 694 v~l~~~lG--------~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l 765 (1025)
T KOG1095|consen 694 VTLLRVLG--------KGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCL 765 (1025)
T ss_pred eEeeeeec--------cccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeec
Confidence 46688888 99999999998865433 489998887 445668899999999999999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLK---ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~---~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
+. ...+|++|||. +|..+|++... ....++...+..+..||++|++||+ +.++|||||-..|+|++....+|
T Consensus 766 ~~--~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe-~~~fvHRDLAaRNCLL~~~r~VK 842 (1025)
T KOG1095|consen 766 DS--GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE-SKHFVHRDLAARNCLLDERRVVK 842 (1025)
T ss_pred CC--CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH-hCCCcCcchhhhheeecccCcEE
Confidence 87 88999999999 89999965321 1456888999999999999999999 99999999999999999999999
Q ss_pred EcccchhhccccccCCCCccccc-ccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCC-----------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSR-YEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNR----------- 269 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~-~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~----------- 269 (852)
|+|||+++.+-+ ..+++... ..-..+|||||.+....++.++|||||||++||+|+ |..||.+.
T Consensus 843 IaDFGlArDiy~---~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ 919 (1025)
T KOG1095|consen 843 IADFGLARDIYD---KDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLE 919 (1025)
T ss_pred EcccchhHhhhh---chheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHh
Confidence 999999983321 11111111 112248999999988899999999999999999999 77888543
Q ss_pred -ccccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 270 -KSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 270 -~~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
..+.++..+|..+.+++..||..+|+.||++..+++.+
T Consensus 920 ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~ 958 (1025)
T KOG1095|consen 920 GGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQD 958 (1025)
T ss_pred CCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhh
Confidence 24567889999999999999999999999999999864
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-28 Score=294.09 Aligned_cols=142 Identities=19% Similarity=0.223 Sum_probs=127.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
..|.+.++|| .|+|++||+|.+..+++.|+||++... .....+.+|+..++.++||||+++++++..
T Consensus 4 ~~y~i~~~LG--------~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~ 75 (669)
T cd05610 4 EEFVIVKPIS--------RGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS 75 (669)
T ss_pred CCEEEEEEEe--------cCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE
Confidence 3599999999 999999999999999999999999762 123678899999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. .++||||||+. +|..++.. .+.+++..++.++.||+.||.||| ..+|+||||||+||||+.+|.+||+||
T Consensus 76 ~--~~~~lVmEy~~g~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yLH-~~gIiHrDLKP~NILl~~~g~vkL~DF 148 (669)
T cd05610 76 A--NNVYLVMEYLIGGDVKSLLHI----YGYFDEEMAVKYISEVALALDYLH-RHGIIHRDLKPDNMLISNEGHIKLTDF 148 (669)
T ss_pred C--CEEEEEEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-hCCEEeCCccHHHEEEcCCCCEEEEeC
Confidence 7 89999999997 78888843 256888999999999999999999 899999999999999999999999999
Q ss_pred chhh
Q psy3914 207 EYME 210 (852)
Q Consensus 207 g~a~ 210 (852)
|+++
T Consensus 149 Gls~ 152 (669)
T cd05610 149 GLSK 152 (669)
T ss_pred CCCc
Confidence 9875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0670|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-30 Score=279.58 Aligned_cols=230 Identities=17% Similarity=0.211 Sum_probs=193.0
Q ss_pred ccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCC------CCCcceEeeeEEcCCCCeEEEEEeecc-
Q psy3914 71 QKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLR------HPSILTFLDSVESPSKSLVYLAVEYVE- 142 (852)
Q Consensus 71 ~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~Lr------HPnIlk~~d~~e~~~~~~~yIVtE~v~- 142 (852)
+.|-|++|.+|.+..-|..||||++.. +.....-..|+.+|++|. .-++|.++..|... +++|+|+|.+.
T Consensus 441 GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hk--nHLClVFE~Lsl 518 (752)
T KOG0670|consen 441 GKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHK--NHLCLVFEPLSL 518 (752)
T ss_pred ccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhc--ceeEEEehhhhc
Confidence 489999999999999999999999987 444456688999999996 24799999999988 99999999999
Q ss_pred cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC-CcEEEcccchhhccccccCCCCc
Q psy3914 143 PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC-GEWKLGGLEYMEKISEASCIPMK 221 (852)
Q Consensus 143 ~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~-g~~KL~DFg~a~~~~~~~~~~~~ 221 (852)
+|.++|.++ ..+..+....+..+..|+.-||+.|- .||++|.||||+||||++. ..+||||||.+..+.++...|+
T Consensus 519 NLRevLKKy-G~nvGL~ikaVRsYaqQLflALklLK-~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPY- 595 (752)
T KOG0670|consen 519 NLREVLKKY-GRNVGLHIKAVRSYAQQLFLALKLLK-KCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEITPY- 595 (752)
T ss_pred hHHHHHHHh-CcccceeehHHHHHHHHHHHHHHHHH-hcCeeecccCccceEeccCcceeeeccCccccccccccccHH-
Confidence 999999655 44567888899999999999999999 9999999999999999985 5699999999987765444433
Q ss_pred ccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC---------------------------
Q psy3914 222 RYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN--------------------------- 274 (852)
Q Consensus 222 ~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~--------------------------- 274 (852)
..+..|.|||++.+..|++..|+||+||.||||+||+..|.|..+-..
T Consensus 596 -----LVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD 670 (752)
T KOG0670|consen 596 -----LVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFD 670 (752)
T ss_pred -----HHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcc
Confidence 234489999999999999999999999999999999987754321000
Q ss_pred -------------------------------------cCCCC-------hhHHHHHHHhccCCCCCCCCHHHHHHhhcCC
Q psy3914 275 -------------------------------------IDNIP-------ENLKRVYLELISERPNQRPNPADFIMRNRKP 310 (852)
Q Consensus 275 -------------------------------------~~~ip-------~~L~~li~~lL~~nP~~Rps~~elL~~l~~~ 310 (852)
...+| ..|.+|+.+||..||.+|.++.+.|.|
T Consensus 671 ~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H---- 746 (752)
T KOG0670|consen 671 QDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH---- 746 (752)
T ss_pred cccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC----
Confidence 01123 247889999999999999999999998
Q ss_pred CCCCc
Q psy3914 311 GGYFK 315 (852)
Q Consensus 311 ~~fF~ 315 (852)
|||.
T Consensus 747 -pFi~ 750 (752)
T KOG0670|consen 747 -PFIT 750 (752)
T ss_pred -Cccc
Confidence 8885
|
|
| >KOG0696|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-29 Score=267.18 Aligned_cols=252 Identities=17% Similarity=0.258 Sum_probs=209.7
Q ss_pred cCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhC-CCCCcc
Q psy3914 47 GRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTL-RHPSIL 120 (852)
Q Consensus 47 ~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~L-rHPnIl 120 (852)
.++.+..-.|.+...+| .|+||.|.+|..+.+.+.+|||++++ +...+.-..|-++|... +-|.++
T Consensus 342 ~~d~i~~tDFnFl~VlG--------KGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~ 413 (683)
T KOG0696|consen 342 KRDRIKATDFNFLMVLG--------KGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLV 413 (683)
T ss_pred cccceeecccceEEEec--------cCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHH
Confidence 34445555678889999 99999999999999999999999988 45556667777777655 467888
Q ss_pred eEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC
Q psy3914 121 TFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC 198 (852)
Q Consensus 121 k~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~ 198 (852)
+++..|++- +.+|+|||||. +|-..+++. +.+.+..+..+...|+-||-||| +.|||+||||.+||+++.+
T Consensus 414 qlHScFQTm--DRLyFVMEyvnGGDLMyhiQQ~----GkFKEp~AvFYAaEiaigLFFLh-~kgIiYRDLKLDNvmLd~e 486 (683)
T KOG0696|consen 414 QLHSCFQTM--DRLYFVMEYVNGGDLMYHIQQV----GKFKEPVAVFYAAEIAIGLFFLH-SKGIIYRDLKLDNVMLDSE 486 (683)
T ss_pred HHHHHhhhh--hheeeEEEEecCchhhhHHHHh----cccCCchhhhhhHHHHHHhhhhh-cCCeeeeeccccceEeccC
Confidence 889999987 89999999999 677666433 77888899999999999999999 9999999999999999999
Q ss_pred CcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-------
Q psy3914 199 GEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS------- 271 (852)
Q Consensus 199 g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------- 271 (852)
|++||.|||++.. ..........++||+.|+|||++.-..|+.++|.|++|+++|||+.|++||.|.+.
T Consensus 487 GHiKi~DFGmcKE----ni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI 562 (683)
T KOG0696|consen 487 GHIKIADFGMCKE----NIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAI 562 (683)
T ss_pred CceEeeecccccc----cccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 9999999999872 22333445578999999999999888999999999999999999999999987643
Q ss_pred ----ccCcCCCChhHHHHHHHhccCCCCCCCCH-----HHHHHhhcCCCCCCcchHHHHH
Q psy3914 272 ----LSNIDNIPENLKRVYLELISERPNQRPNP-----ADFIMRNRKPGGYFKNDLIDAL 322 (852)
Q Consensus 272 ----l~~~~~ip~~L~~li~~lL~~nP~~Rps~-----~elL~~l~~~~~fF~n~lv~~l 322 (852)
...+..++.+...+.+.+|..+|.+|... .++-+| +||+..-.+.+
T Consensus 563 ~ehnvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H-----~FFR~iDWek~ 617 (683)
T KOG0696|consen 563 MEHNVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREH-----PFFRRIDWEKL 617 (683)
T ss_pred HHccCcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhC-----cchhhccHHHH
Confidence 33467888899999999999999999754 344444 88877654443
|
|
| >KOG0668|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-29 Score=251.04 Aligned_cols=238 Identities=18% Similarity=0.228 Sum_probs=199.4
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCC-CCCcceEeeeEEcCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLR-HPSILTFLDSVESPSK 131 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~~~ 131 (852)
...|++..++| .|.++.||.|.+..+++.|.||+++. -....+++|+++|..|+ ||||+++++++.+...
T Consensus 37 ~ddYeivrk~G--------RGKYSEVFeg~~~~~~eK~ViKiLKP-VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~S 107 (338)
T KOG0668|consen 37 QDDYEIVRKVG--------RGKYSEVFEGINITNNEKCVIKILKP-VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPES 107 (338)
T ss_pred cchHHHHHHHc--------CccHhhHhcccccCCCceEEEeeech-HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccc
Confidence 45699999999 99999999999999999999999986 45678999999999998 9999999999988655
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc-CCcEEEcccch
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS-CGEWKLGGLEY 208 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~-~g~~KL~DFg~ 208 (852)
....+|+||+. +...+. ..++...|.++++++++||.|+| +.||+|||+||.||+|+. ...++|+|+|+
T Consensus 108 ktpaLiFE~v~n~Dfk~ly-------~tl~d~dIryY~~elLkALdyCH-S~GImHRDVKPhNvmIdh~~rkLrlIDWGL 179 (338)
T KOG0668|consen 108 KTPSLIFEYVNNTDFKQLY-------PTLTDYDIRYYIYELLKALDYCH-SMGIMHRDVKPHNVMIDHELRKLRLIDWGL 179 (338)
T ss_pred cCchhHhhhhccccHHHHh-------hhhchhhHHHHHHHHHHHHhHHH-hcCcccccCCcceeeechhhceeeeeecch
Confidence 67889999998 444433 46778899999999999999999 999999999999999997 56699999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCC-CCCccccC------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQS-TNRKSLSN------------ 274 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf-~~~~~l~~------------ 274 (852)
+..+ .|...+...+.+..|.-||.+ .-..|+.+.|+|||||++..|+..+-|| .|.++.++
T Consensus 180 AEFY-----Hp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~e 254 (338)
T KOG0668|consen 180 AEFY-----HPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDE 254 (338)
T ss_pred Hhhc-----CCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHH
Confidence 8643 334444556667789999998 5566888999999999999999887665 44433221
Q ss_pred ------------------------------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 275 ------------------------------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 275 ------------------------------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
..-+.++..+++.++|..|...|+|+.+.+.| +||...
T Consensus 255 l~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H-----pyF~~~ 328 (338)
T KOG0668|consen 255 LYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH-----PYFAPV 328 (338)
T ss_pred HHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC-----chHHHH
Confidence 12346788999999999999999999999998 898653
|
|
| >KOG0603|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-29 Score=279.57 Aligned_cols=233 Identities=15% Similarity=0.214 Sum_probs=192.0
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTL-RHPSILTFLDSVESPS 130 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~ 130 (852)
+...|++...+| .|+|+.|..+.++.+++..+||++.+. .....+|+.++... .||||+++++++++.
T Consensus 320 ~~~~y~~~~~~~--------~gs~s~~~~~~~~~t~~~~~vkii~~~--~~~~~~e~~~~~~~~~h~niv~~~~v~~~~- 388 (612)
T KOG0603|consen 320 FTESYEFREELG--------EGSFSAVKYCESSPTDQEPAVKIISKR--ADDNQDEIPISLLVRDHPNIVKSHDVYEDG- 388 (612)
T ss_pred cchhhccccccC--------CCCccceeeeeccccccchhheecccc--ccccccccchhhhhcCCCcceeecceecCC-
Confidence 445689988898 899999999999999999999999873 23445666555544 699999999999988
Q ss_pred CCeEEEEEeecc-c-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE-ccCCcEEEcccc
Q psy3914 131 KSLVYLAVEYVE-P-IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI-NSCGEWKLGGLE 207 (852)
Q Consensus 131 ~~~~yIVtE~v~-~-L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV-~~~g~~KL~DFg 207 (852)
.+.|+|||.+. . |.+.+. . ......++..|+.||+.|+.||| ..|+|||||||+||++ +..|+++|+|||
T Consensus 389 -~~~~~v~e~l~g~ell~ri~----~-~~~~~~e~~~w~~~lv~Av~~LH-~~gvvhRDLkp~NIL~~~~~g~lrltyFG 461 (612)
T KOG0603|consen 389 -KEIYLVMELLDGGELLRRIR----S-KPEFCSEASQWAAELVSAVDYLH-EQGVVHRDLKPGNILLDGSAGHLRLTYFG 461 (612)
T ss_pred -ceeeeeehhccccHHHHHHH----h-cchhHHHHHHHHHHHHHHHHHHH-hcCeeecCCChhheeecCCCCcEEEEEec
Confidence 99999999998 2 333331 1 22223677889999999999999 8999999999999999 689999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-------cCc---CC
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------SNI---DN 277 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------~~~---~~ 277 (852)
+++..... +..-+-|..|.|||++....|+.++|+||||+++|+|++|..||.....- ... ..
T Consensus 462 ~a~~~~~~-------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s~~ 534 (612)
T KOG0603|consen 462 FWSELERS-------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFSEC 534 (612)
T ss_pred hhhhCchh-------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccccc
Confidence 99855432 22234466999999999899999999999999999999999999543221 112 67
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
|+...++++.+||+.+|.+|+++.+++.| +||
T Consensus 535 vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h-----~w~ 566 (612)
T KOG0603|consen 535 VSDEAKDLLQQLLQVDPALRLGADEIGAH-----PWF 566 (612)
T ss_pred cCHHHHHHHHHhccCChhhCcChhhhccC-----cch
Confidence 89999999999999999999999999997 787
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=248.88 Aligned_cols=224 Identities=21% Similarity=0.351 Sum_probs=189.0
Q ss_pred CceEEEEEEEcCCCeEEEEEEEeCCCc---hHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHH
Q psy3914 74 TFWKFHGGKKKGSNEKVTIFLNDSADT---YEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHL 148 (852)
Q Consensus 74 s~~~Vy~a~~k~~g~~VaVKv~~~~~~---~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L 148 (852)
++|.||+|....+|+.|++|++..... ...+.+|++.++.++||||+++++.+... ...++++|++. +|..++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDE--DKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeC--CEEEEEEeCCCCCCHHHHH
Confidence 468999999998899999999987322 67899999999999999999999999987 89999999998 688887
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccC
Q psy3914 149 DNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYED 228 (852)
Q Consensus 149 ~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~g 228 (852)
.. ...++...+..++.+++.+|.||| +.+++|+||+|.||+++.++.++|+|||++....... ......+
T Consensus 79 ~~----~~~~~~~~~~~~~~~l~~~l~~lh-~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-----~~~~~~~ 148 (244)
T smart00220 79 KK----RGRLSEDEARFYARQILSALEYLH-SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-----LLTTFVG 148 (244)
T ss_pred Hh----ccCCCHHHHHHHHHHHHHHHHHHH-HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-----ccccccC
Confidence 43 123888999999999999999999 8999999999999999999999999999987543221 2223456
Q ss_pred CCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc------------C--cC-CCChhHHHHHHHhccCC
Q psy3914 229 QSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------N--ID-NIPENLKRVYLELISER 293 (852)
Q Consensus 229 t~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------~--~~-~ip~~L~~li~~lL~~n 293 (852)
+..|++||......++.++|+|+||+++|++++|..||....... . .. .++..+.+++.+|+..+
T Consensus 149 ~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 228 (244)
T smart00220 149 TPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKD 228 (244)
T ss_pred CcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCC
Confidence 778999999877777889999999999999999999985411110 0 11 18899999999999999
Q ss_pred CCCCCCHHHHHHhhcCCCCCC
Q psy3914 294 PNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 294 P~~Rps~~elL~~l~~~~~fF 314 (852)
|..||++.+++++ +||
T Consensus 229 p~~Rp~~~~~~~~-----~~~ 244 (244)
T smart00220 229 PEKRLTAEEALQH-----PFF 244 (244)
T ss_pred chhccCHHHHhhC-----CCC
Confidence 9999999999996 775
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0194|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=277.76 Aligned_cols=230 Identities=17% Similarity=0.252 Sum_probs=191.5
Q ss_pred eccccCCCCCCcccCCceEEEEEEEcCCCe---E-EEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 59 GEPAVSFSGCFTQKHTFWKFHGGKKKGSNE---K-VTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 59 ~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~---~-VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
++++| +|.||.||.|+.+..+. . ||||.... ......+.+|.++|++|+||||++++++...+
T Consensus 162 ~kkLG--------eGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~ 233 (474)
T KOG0194|consen 162 GKKLG--------EGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE 233 (474)
T ss_pred cceee--------cccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC
Confidence 57898 99999999998876532 3 89998874 34566789999999999999999999999887
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
..+|||||+|. +|.++|++. ...++..+...++++.+.||+||| ..++|||||-..|+|++.++.+||+|||
T Consensus 234 --~Pl~ivmEl~~gGsL~~~L~k~---~~~v~~~ek~~~~~~AA~Gl~YLh-~k~~IHRDIAARNcL~~~~~~vKISDFG 307 (474)
T KOG0194|consen 234 --EPLMLVMELCNGGSLDDYLKKN---KKSLPTLEKLRFCYDAARGLEYLH-SKNCIHRDIAARNCLYSKKGVVKISDFG 307 (474)
T ss_pred --CccEEEEEecCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHhHHHHHH-HCCCcchhHhHHHheecCCCeEEeCccc
Confidence 88999999999 799999543 236899999999999999999999 9999999999999999999999999999
Q ss_pred hhhccccccCCCCcccc-cccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-------------c
Q psy3914 208 YMEKISEASCIPMKRYS-RYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS-------------L 272 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~-~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~-------------l 272 (852)
+++.-. .+.... ...-...|+|||.+....|+.++|||||||++||+|+ |..||.+... .
T Consensus 308 Ls~~~~-----~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~ 382 (474)
T KOG0194|consen 308 LSRAGS-----QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRM 382 (474)
T ss_pred cccCCc-----ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccC
Confidence 986321 111111 1122348999999977799999999999999999998 7778865432 2
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.....-|..+..++.+|+..+|+.||++.++.+.+
T Consensus 383 ~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l 417 (474)
T KOG0194|consen 383 PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKL 417 (474)
T ss_pred CCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHH
Confidence 23456788999999999999999999999998753
|
|
| >KOG1027|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-29 Score=287.74 Aligned_cols=267 Identities=18% Similarity=0.284 Sum_probs=204.2
Q ss_pred cCCc-eEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCC-CCCcceEeeeEEcCCCCeEEEEEeecc-cHHHHH
Q psy3914 72 KHTF-WKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLR-HPSILTFLDSVESPSKSLVYLAVEYVE-PIFYHL 148 (852)
Q Consensus 72 ~Gs~-~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~~~~~~yIVtE~v~-~L~~~L 148 (852)
.|+. ..||+|.. .|+.||||.+-. .....+.+|++.|+.-+ |||||+++..-.+. .++||+.|.|. +|.+++
T Consensus 519 ~Gs~Gt~Vf~G~y--e~R~VAVKrll~-e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~--qF~YIalELC~~sL~dli 593 (903)
T KOG1027|consen 519 YGSNGTVVFRGVY--EGREVAVKRLLE-EFFDFAQREIQLLQESDEHPNVIRYYCSEQDR--QFLYIALELCACSLQDLI 593 (903)
T ss_pred cCCCCcEEEEEee--CCceehHHHHhh-HhHHHHHHHHHHHHhccCCCceEEEEeeccCC--ceEEEEehHhhhhHHHHH
Confidence 3444 35899998 688999997764 45678999999999885 99999999988877 99999999999 899999
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc---CC--cEEEcccchhhccccccCCCCccc
Q psy3914 149 DNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS---CG--EWKLGGLEYMEKISEASCIPMKRY 223 (852)
Q Consensus 149 ~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~---~g--~~KL~DFg~a~~~~~~~~~~~~~~ 223 (852)
+..............+..+.|+++||++|| +++||||||||.||+|+. +| ..+|+|||++.+...+. ....+.
T Consensus 594 e~~~~d~~~~~~i~~~~~l~q~~~GlaHLH-sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~-sS~~r~ 671 (903)
T KOG1027|consen 594 ESSGLDVEMQSDIDPISVLSQIASGLAHLH-SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK-SSFSRL 671 (903)
T ss_pred hccccchhhcccccHHHHHHHHHHHHHHHH-hcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc-chhhcc
Confidence 643111112222556788999999999999 899999999999999986 34 58999999998765432 233445
Q ss_pred ccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhC-CCCCCCC-----------ccccCcCCCCh-hHHHHHHHhc
Q psy3914 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG-PLQSTNR-----------KSLSNIDNIPE-NLKRVYLELI 290 (852)
Q Consensus 224 ~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG-~~pf~~~-----------~~l~~~~~ip~-~L~~li~~lL 290 (852)
....||.+|+|||++.......++|||||||++|++++| .+||... ..+..+...+. ...++|.+|+
T Consensus 672 s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml 751 (903)
T KOG1027|consen 672 SGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVHLEPLPDCEAKDLISRML 751 (903)
T ss_pred cCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceeeeccCchHHHHHHHHHhc
Confidence 667899999999999777777899999999999999997 8999432 11112222221 6789999999
Q ss_pred cCCCCCCCCHHHHHHhhcCCCCCCcchHHHHHHHHHHhhccCHHHHhHHHHhhhhhhccCCcccccccchhhhHhhhhcC
Q psy3914 291 SERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKIDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYG 370 (852)
Q Consensus 291 ~~nP~~Rps~~elL~~l~~~~~fF~n~lv~~l~~Leel~~k~~~eK~~Ff~~L~~~l~~fP~~~~~~kiLP~Ll~~~e~~ 370 (852)
+++|..||++.++|.| ||| .+.+.|.+||++..+.++.-. ..-=.+||..++.+
T Consensus 752 ~~dP~~RPsa~~VL~H-----PlF----------------W~~ekrL~Fl~dvSDRvE~e~-----r~~~s~lL~~le~~ 805 (903)
T KOG1027|consen 752 NPDPQLRPSATDVLNH-----PLF----------------WDSEKRLSFLRDVSDRVEKEN-----RDSPSELLRALEAG 805 (903)
T ss_pred CCCcccCCCHHHHhCC-----Ccc----------------CChHHHHHHHHhhhhhhhhhh-----ccCchHHHHhhccC
Confidence 9999999999999998 888 444677788887776654211 01123467777655
Q ss_pred C
Q psy3914 371 E 371 (852)
Q Consensus 371 ~ 371 (852)
.
T Consensus 806 ~ 806 (903)
T KOG1027|consen 806 A 806 (903)
T ss_pred C
Confidence 4
|
|
| >KOG0671|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=269.27 Aligned_cols=247 Identities=17% Similarity=0.198 Sum_probs=203.2
Q ss_pred cccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCC--CC---
Q psy3914 45 FFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRH--PS--- 118 (852)
Q Consensus 45 ~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrH--Pn--- 118 (852)
++.-......+|+|.+.+| +|.||.|-.+.+..++..||||+++. ....+.++-|+++|.+|.+ |+
T Consensus 80 v~~~gD~l~~Ry~i~~~lG--------eGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~ 151 (415)
T KOG0671|consen 80 VYQVGDILTNRYEIVDLLG--------EGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKF 151 (415)
T ss_pred EEEeccccccceehhhhhc--------CCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCce
Confidence 4443344567899999999 99999999999999999999999987 6677788899999999953 33
Q ss_pred -cceEeeeEEcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEc
Q psy3914 119 -ILTFLDSVESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN 196 (852)
Q Consensus 119 -Ilk~~d~~e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~ 196 (852)
++++.++|+-. +++|||+|.+. +++++|.. +....++...|..+.+|++++++||| +.+++|-||||+||++.
T Consensus 152 rcv~m~~wFdyr--ghiCivfellG~S~~dFlk~--N~y~~fpi~~ir~m~~QL~~sv~fLh-~~kl~HTDLKPENILfv 226 (415)
T KOG0671|consen 152 RCVQMRDWFDYR--GHICIVFELLGLSTFDFLKE--NNYIPFPIDHIRHMGYQLLESVAFLH-DLKLTHTDLKPENILFV 226 (415)
T ss_pred EEEeeehhhhcc--CceEEEEeccChhHHHHhcc--CCccccchHHHHHHHHHHHHHHHHHH-hcceeecCCChheEEEe
Confidence 77888889887 99999999999 89999943 23356888999999999999999999 99999999999999985
Q ss_pred c--------------------CCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHH
Q psy3914 197 S--------------------CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILI 256 (852)
Q Consensus 197 ~--------------------~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll 256 (852)
+ +-.+||+|||.++...+. .+..+.|..|+|||++.+-.++..+|+||+||||
T Consensus 227 ss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~-------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL 299 (415)
T KOG0671|consen 227 SSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH-------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCIL 299 (415)
T ss_pred ccceEEEeccCCccceeccCCCcceEEEecCCcceeccC-------cceeeeccccCCchheeccCcCCccCceeeeeEE
Confidence 2 234899999998743221 2356678899999999999999999999999999
Q ss_pred HHHHhCCCCCCCCccccCc-------CC--------------------------------------C------------C
Q psy3914 257 WEVFNGPLQSTNRKSLSNI-------DN--------------------------------------I------------P 279 (852)
Q Consensus 257 ~el~tG~~pf~~~~~l~~~-------~~--------------------------------------i------------p 279 (852)
+|+++|...|++.++.+++ +. - -
T Consensus 300 ~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~ 379 (415)
T KOG0671|consen 300 VELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEH 379 (415)
T ss_pred EEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHH
Confidence 9999998888655432210 00 0 1
Q ss_pred hhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 280 ENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 280 ~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
..|.+++++||..||.+|+|+.++|.| +||+-
T Consensus 380 ~~LfDLl~~mL~fDP~~RiTl~EAL~H-----pFF~~ 411 (415)
T KOG0671|consen 380 VQLFDLLRRMLEFDPARRITLREALSH-----PFFAR 411 (415)
T ss_pred hHHHHHHHHHHccCccccccHHHHhcC-----HHhhc
Confidence 247899999999999999999999998 89863
|
|
| >KOG0608|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-28 Score=268.93 Aligned_cols=241 Identities=12% Similarity=0.111 Sum_probs=197.6
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
|..++.|| -|.||.|.++++.+|...+|+|.+.+ .+.....+.|-.+|..-..+-|+++|-.|++.
T Consensus 631 Fvkik~iG--------vGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDk- 701 (1034)
T KOG0608|consen 631 FVKIKTIG--------VGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDK- 701 (1034)
T ss_pred eEEEeeec--------ccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccC-
Confidence 67789999 89999999999999999999999988 45666788899999999999999999999988
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
.++||||+|+. ++-.+|-+ -+-+.|..++.++..+.+|+.+.| ..|+|||||||+||||+.+|++||.|||+
T Consensus 702 -dnLYFVMdYIPGGDmMSLLIr----mgIFeE~LARFYIAEltcAiesVH-kmGFIHRDiKPDNILIDrdGHIKLTDFGL 775 (1034)
T KOG0608|consen 702 -DNLYFVMDYIPGGDMMSLLIR----MGIFEEDLARFYIAELTCAIESVH-KMGFIHRDIKPDNILIDRDGHIKLTDFGL 775 (1034)
T ss_pred -CceEEEEeccCCccHHHHHHH----hccCHHHHHHHHHHHHHHHHHHHH-hccceecccCccceEEccCCceeeeeccc
Confidence 99999999999 66666632 277889999999999999999999 99999999999999999999999999999
Q ss_pred hhcccccc---------------CCCC-----------------------cccccccCCCcccCCccccCCCCCcchhHH
Q psy3914 209 MEKISEAS---------------CIPM-----------------------KRYSRYEDQSTYQIPENSLSHVTKCSTDMY 250 (852)
Q Consensus 209 a~~~~~~~---------------~~~~-----------------------~~~~~~~gt~~Y~APE~~~~~~~~~~sDIw 250 (852)
|+.+.... ..+. .....++||+.|+|||++....|+..+|.|
T Consensus 776 CTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdww 855 (1034)
T KOG0608|consen 776 CTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWW 855 (1034)
T ss_pred cccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhh
Confidence 97543210 0000 011236799999999999888999999999
Q ss_pred hHHHHHHHHHhCCCCCCCCcccc---------------CcCCCChhHHHHHHHhccCCCCCCC---CHHHHHHhhcCCCC
Q psy3914 251 GLGILIWEVFNGPLQSTNRKSLS---------------NIDNIPENLKRVYLELISERPNQRP---NPADFIMRNRKPGG 312 (852)
Q Consensus 251 SLG~ll~el~tG~~pf~~~~~l~---------------~~~~ip~~L~~li~~lL~~nP~~Rp---s~~elL~~l~~~~~ 312 (852)
|.|+|||||+.|+.||....... ...+++++..++|.+|+. .++.|. -.+++..| +
T Consensus 856 s~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaH-----p 929 (1034)
T KOG0608|consen 856 SVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAH-----P 929 (1034)
T ss_pred HhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcC-----c
Confidence 99999999999999996442221 135788999999988653 455565 23445554 8
Q ss_pred CCcch
Q psy3914 313 YFKND 317 (852)
Q Consensus 313 fF~n~ 317 (852)
||+..
T Consensus 930 fFkgI 934 (1034)
T KOG0608|consen 930 FFKGI 934 (1034)
T ss_pred ccccc
Confidence 99764
|
|
| >KOG0614|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-29 Score=276.25 Aligned_cols=246 Identities=15% Similarity=0.206 Sum_probs=210.0
Q ss_pred cccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCc
Q psy3914 45 FFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSI 119 (852)
Q Consensus 45 ~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnI 119 (852)
+|+.-...+ .++...+| -|+||.|=.++.+.....+|+|++++ ..+.+.+..|-++|..++.|.|
T Consensus 413 e~a~v~l~d--l~~iaTLG--------vGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fI 482 (732)
T KOG0614|consen 413 EFAQVKLSD--LKRIATLG--------VGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFI 482 (732)
T ss_pred hhcccchhh--hhhhhhcc--------cCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHH
Confidence 454443333 56677777 89999999998876666688888877 4456788899999999999999
Q ss_pred ceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc
Q psy3914 120 LTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS 197 (852)
Q Consensus 120 lk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~ 197 (852)
+++|..|.++ .++|+.||.|- .|...|.+ .+.+++...+.++..+++|+.||| ..|||+|||||+|.+++.
T Consensus 483 vrLYrTfrd~--kyvYmLmEaClGGElWTiLrd----Rg~Fdd~tarF~~acv~EAfeYLH-~k~iIYRDLKPENllLd~ 555 (732)
T KOG0614|consen 483 VRLYRTFRDS--KYVYMLMEACLGGELWTILRD----RGSFDDYTARFYVACVLEAFEYLH-RKGIIYRDLKPENLLLDN 555 (732)
T ss_pred HHHHHHhccc--hhhhhhHHhhcCchhhhhhhh----cCCcccchhhhhHHHHHHHHHHHH-hcCceeccCChhheeecc
Confidence 9999999998 99999999998 69988853 378899999999999999999999 999999999999999999
Q ss_pred CCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc----
Q psy3914 198 CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---- 273 (852)
Q Consensus 198 ~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---- 273 (852)
+|-+||.||||+..+.... ..-+++||+.|.|||++.+...+.++|.|+||+++|||++|.+||.+.+.+.
T Consensus 556 ~Gy~KLVDFGFAKki~~g~-----KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ 630 (732)
T KOG0614|consen 556 RGYLKLVDFGFAKKIGSGR-----KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNL 630 (732)
T ss_pred CCceEEeehhhHHHhccCC-----ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHH
Confidence 9999999999999775432 2236899999999999998999999999999999999999999998765543
Q ss_pred ---------CcCCCChhHHHHHHHhccCCCCCCCC-----HHHHHHhhcCCCCCCcch
Q psy3914 274 ---------NIDNIPENLKRVYLELISERPNQRPN-----PADFIMRNRKPGGYFKND 317 (852)
Q Consensus 274 ---------~~~~ip~~L~~li~~lL~~nP~~Rps-----~~elL~~l~~~~~fF~n~ 317 (852)
.+..|++...+++++++..+|..|.. +.+|-+| .||.+-
T Consensus 631 ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH-----~Wf~gf 683 (732)
T KOG0614|consen 631 ILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH-----RWFEGF 683 (732)
T ss_pred HHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh-----hhhhcC
Confidence 45788999999999999999999975 5667666 677654
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=282.32 Aligned_cols=271 Identities=13% Similarity=0.109 Sum_probs=183.3
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCC----CeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS----NEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~----g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
...|++++.|| .|+||.||+|++..+ +..|+||.+......+...++ .++...+.++..++..+..
T Consensus 131 ~~~y~l~~~LG--------~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e--~l~~~~~~~~~~~~~~~~~ 200 (566)
T PLN03225 131 KDDFVLGKKLG--------EGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNE--RVRRACPNSCADFVYGFLE 200 (566)
T ss_pred cCCeEEeEEEe--------eCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHH--HHHhhchhhHHHHHHhhhc
Confidence 34699999999 999999999999988 899999988753322222222 2223333333333322111
Q ss_pred ----CCCCeEEEEEeecc--cHHHHHHhhhh----------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceec
Q psy3914 129 ----PSKSLVYLAVEYVE--PIFYHLDNTLK----------------ENNEKKQIYISWGIFQITRALSFLINDADLRHN 186 (852)
Q Consensus 129 ----~~~~~~yIVtE~v~--~L~~~L~~~~~----------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~ 186 (852)
.....+|+|+||+. +|.+++..... .........+..++.||+.||.||| +.+|+||
T Consensus 201 ~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH-~~gIiHR 279 (566)
T PLN03225 201 PVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH-STGIVHR 279 (566)
T ss_pred ccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH-HCCEEeC
Confidence 12267999999998 68888743110 0011223456789999999999999 8999999
Q ss_pred ccCCCCEEEcc-CCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccC----------------------CCC
Q psy3914 187 HVNHTSIFINS-CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS----------------------HVT 243 (852)
Q Consensus 187 DIkp~NIlV~~-~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~----------------------~~~ 243 (852)
||||+||+++. ++.+||+|||++..+..... .......+++.|+|||.+.. ..+
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~---~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~ 356 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLRVGIN---YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL 356 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCccccccccc---cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence 99999999986 68999999999875432111 12234567889999997521 123
Q ss_pred CcchhHHhHHHHHHHHHhCCCCCCCCc-----ccc--------------------------CcCCCChhHHHHHHHhccC
Q psy3914 244 KCSTDMYGLGILIWEVFNGPLQSTNRK-----SLS--------------------------NIDNIPENLKRVYLELISE 292 (852)
Q Consensus 244 ~~~sDIwSLG~ll~el~tG~~pf~~~~-----~l~--------------------------~~~~ip~~L~~li~~lL~~ 292 (852)
+.++|||||||++|||+++..++.... .+. .+........+++++||..
T Consensus 357 ~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 357 PDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred CCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccC
Confidence 345699999999999999876653210 000 0011122344899999999
Q ss_pred CCCCCCCHHHHHHhhcCCCCCCcchHHHHHHHHHHhhccCHHHHhHHHHh
Q psy3914 293 RPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKIDKNKFFNG 342 (852)
Q Consensus 293 nP~~Rps~~elL~~l~~~~~fF~n~lv~~l~~Leel~~k~~~eK~~Ff~~ 342 (852)
||++|||+.++++| +||.......+..++.+......+..+...+
T Consensus 437 dP~kR~ta~e~L~H-----pff~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (566)
T PLN03225 437 KGRQRISAKAALAH-----PYFDREGLLGLSVMQNLRLQLFRATQQDYGE 481 (566)
T ss_pred CcccCCCHHHHhCC-----cCcCCCCccccccccccccccchhhHHHHHH
Confidence 99999999999998 9998765555555555555444444444333
|
|
| >KOG4278|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=265.32 Aligned_cols=235 Identities=14% Similarity=0.205 Sum_probs=199.5
Q ss_pred eEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEE
Q psy3914 57 EVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVY 135 (852)
Q Consensus 57 ~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~y 135 (852)
+...++| .|.||.||.|..+.-.-.|+||.++- ....+.+..|..+|+.++|||+++++++|..+ ..+|
T Consensus 270 tMkhKLG--------GGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~E--pPFY 339 (1157)
T KOG4278|consen 270 TMKHKLG--------GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE--PPFY 339 (1157)
T ss_pred eeeeccC--------CCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccC--CCeE
Confidence 4467888 78999999999999999999999876 45677899999999999999999999999988 8899
Q ss_pred EEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccc
Q psy3914 136 LAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKIS 213 (852)
Q Consensus 136 IVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~ 213 (852)
|||||+. +|.+||+.+.. ..++...+.++..||..|+.||. ..++|||||-..|+||.++..+|++|||+++.+.
T Consensus 340 IiTEfM~yGNLLdYLRecnr--~ev~avvLlyMAtQIsSaMeYLE-kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMt 416 (1157)
T KOG4278|consen 340 IITEFMCYGNLLDYLRECNR--SEVPAVVLLYMATQISSAMEYLE-KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMT 416 (1157)
T ss_pred EEEecccCccHHHHHHHhch--hhcchhHHHHHHHHHHHHHHHHH-HhhhhhhhhhhhhccccccceEEeeccchhhhhc
Confidence 9999998 79999965432 45677788999999999999999 9999999999999999999999999999999765
Q ss_pred cccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCC------------ccccCcCCCCh
Q psy3914 214 EASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNR------------KSLSNIDNIPE 280 (852)
Q Consensus 214 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~------------~~l~~~~~ip~ 280 (852)
.+....... ..-...|.|||-+.-..++.++|+|+||++|||+.| |--||.|. -.++.+..+|+
T Consensus 417 gDTYTAHAG---AKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPp 493 (1157)
T KOG4278|consen 417 GDTYTAHAG---AKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPP 493 (1157)
T ss_pred CCceecccC---ccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCH
Confidence 432221111 112348999999977778899999999999999998 66666543 23456789999
Q ss_pred hHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 281 NLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 281 ~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.+..+++.||+.+|..||++.++-+.+
T Consensus 494 kVYeLMraCW~WsPsDRPsFaeiHqaf 520 (1157)
T KOG4278|consen 494 KVYELMRACWNWSPSDRPSFAEIHQAF 520 (1157)
T ss_pred HHHHHHHHHhcCCcccCccHHHHHHHH
Confidence 999999999999999999999997754
|
|
| >KOG0665|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-28 Score=256.34 Aligned_cols=236 Identities=17% Similarity=0.187 Sum_probs=194.5
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|.-..+++ .|.- .|..|.+.-.+++|+||.... ......+.+|++.++.+.|+||++++.+|.-.
T Consensus 17 ~Ry~nL~p~~--------~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~ 87 (369)
T KOG0665|consen 17 KRYVNLKPIG--------SGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQ 87 (369)
T ss_pred eeeeeecccC--------CCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCcc
Confidence 4577778887 5555 677888888899999998765 44556789999999999999999999998643
Q ss_pred C----CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 130 S----KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 130 ~----~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
. -...|+|||++. +|.+++. ..++-..+.++++|++.|+++|| +.+|+||||||+||+|+.++.+||.
T Consensus 88 ~~l~~~~e~y~v~e~m~~nl~~vi~------~elDH~tis~i~yq~~~~ik~lh-s~~IihRdLkPsnivv~~~~~lKi~ 160 (369)
T KOG0665|consen 88 KTLEEFQEVYLVMELMDANLCQVIL------MELDHETISYILYQMLCGIKHLH-SAGIIHRDLKPSNIVVNSDCTLKIL 160 (369)
T ss_pred ccHHHHHhHHHHHHhhhhHHHHHHH------HhcchHHHHHHHHHHHHHHHHHH-hcceeecccCcccceecchhheeec
Confidence 1 135899999999 8888874 35677899999999999999999 9999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccCc---------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI--------- 275 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~~--------- 275 (852)
|||+++..+. .......+.|..|.|||++.+..|...+||||+||++.||++|...|.|...+++.
T Consensus 161 dfg~ar~e~~-----~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgt 235 (369)
T KOG0665|consen 161 DFGLARTEDT-----DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGT 235 (369)
T ss_pred cchhhcccCc-----ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcC
Confidence 9999974322 13344567788999999998888999999999999999999998877655332210
Q ss_pred -----------------------------C---------------CCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCC
Q psy3914 276 -----------------------------D---------------NIPENLKRVYLELISERPNQRPNPADFIMRNRKPG 311 (852)
Q Consensus 276 -----------------------------~---------------~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~ 311 (852)
. .-...+++++.+||-.||++|.+++++|.|
T Consensus 236 pd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H----- 310 (369)
T KOG0665|consen 236 PDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH----- 310 (369)
T ss_pred CCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC-----
Confidence 0 112347889999999999999999999998
Q ss_pred CCCc
Q psy3914 312 GYFK 315 (852)
Q Consensus 312 ~fF~ 315 (852)
|||+
T Consensus 311 PY~~ 314 (369)
T KOG0665|consen 311 PYIK 314 (369)
T ss_pred Ceee
Confidence 8886
|
|
| >KOG0587|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-27 Score=272.14 Aligned_cols=246 Identities=17% Similarity=0.263 Sum_probs=208.5
Q ss_pred CCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCC-CCCcceEeeeEE
Q psy3914 50 ASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLR-HPSILTFLDSVE 127 (852)
Q Consensus 50 p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e 127 (852)
|...-.|+|.+.|| .|.++.||+++.+.+++.++||+.+. ....+.++.|+++|+.+. |||+..+++++.
T Consensus 15 pdp~d~~ei~evig--------~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~ 86 (953)
T KOG0587|consen 15 PDPADIFEIIEVIG--------NGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFI 86 (953)
T ss_pred CCCCCccEEEEEEe--------eccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEE
Confidence 33444589999999 99999999999999999999999988 556678889999999885 999999999876
Q ss_pred cC---CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 128 SP---SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 128 ~~---~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
-. ..+.++||||||. +.-+++++.. ...+.+..|.++++.++.||.+|| ...++|||||-.||+++.+|.+|
T Consensus 87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH-~nkviHRDikG~NiLLT~e~~VK 163 (953)
T KOG0587|consen 87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLH-NNKVIHRDIKGQNVLLTENAEVK 163 (953)
T ss_pred EecCCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHh-hcceeeecccCceEEEeccCcEE
Confidence 43 2468999999999 6778885544 678999999999999999999999 89999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccc-----cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENS-----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----- 272 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-----~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----- 272 (852)
|+|||.+...+. .........||+.|||||++ ....|+..+|+||||++..||--|.+|+.....+
T Consensus 164 LvDFGvSaQlds----T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~ 239 (953)
T KOG0587|consen 164 LVDFGVSAQLDS----TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFL 239 (953)
T ss_pred Eeeeeeeeeeec----ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhcc
Confidence 999999875432 23344467899999999997 3456788999999999999999999998544332
Q ss_pred ---------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 273 ---------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 273 ---------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
..+.+-.+.+.++|..||..|-.+||+..++++| +|..
T Consensus 240 IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h-----pFi~ 286 (953)
T KOG0587|consen 240 IPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH-----PFIT 286 (953)
T ss_pred CCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC-----Cccc
Confidence 2334556678899999999999999999999998 7765
|
|
| >KOG1006|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=251.60 Aligned_cols=232 Identities=16% Similarity=0.200 Sum_probs=185.9
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHH-HHhCCCCCcceEeeeEEcCCCCeEEEEEeecc-cHHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKK-LKTLRHPSILTFLDSVESPSKSLVYLAVEYVE-PIFY 146 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~-Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~-~L~~ 146 (852)
.|.||+|++-.++.+|+..|||.+.. +.....+..|+.. ++.-+.|||+++++.+..+ +..+|.||.+. +|..
T Consensus 74 ~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~E--GdcWiCMELMd~SlDk 151 (361)
T KOG1006|consen 74 NGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSE--GDCWICMELMDISLDK 151 (361)
T ss_pred CCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcC--CceeeeHHHHhhhHHH
Confidence 89999999999999999999999987 2334456666654 4444699999999998887 88999999999 5433
Q ss_pred HHHh-hhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccccc
Q psy3914 147 HLDN-TLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSR 225 (852)
Q Consensus 147 ~L~~-~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~ 225 (852)
+... +...+..++|..+-.+....+.||.||....+||||||||+||+++..|.+||||||++..+.+.... ..
T Consensus 152 lYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAk-----T~ 226 (361)
T KOG1006|consen 152 LYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAK-----TV 226 (361)
T ss_pred HHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHh-----hh
Confidence 3321 22334678899888888899999999999999999999999999999999999999998754432111 12
Q ss_pred ccCCCcccCCccc--cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc---------------ccCc---CCCChhHHHH
Q psy3914 226 YEDQSTYQIPENS--LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS---------------LSNI---DNIPENLKRV 285 (852)
Q Consensus 226 ~~gt~~Y~APE~~--~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~---------------l~~~---~~ip~~L~~l 285 (852)
..|-..|+|||.+ ....|+.++|+||||+.+||+.||.+|+.+-.+ +... -..+..+..+
T Consensus 227 daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~f 306 (361)
T KOG1006|consen 227 DAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRF 306 (361)
T ss_pred ccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHH
Confidence 3455689999998 455799999999999999999999999854321 1111 2367889999
Q ss_pred HHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 286 YLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 286 i~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
|.-||..|-..||...+++++ +|+.
T Consensus 307 intCl~Kd~~~Rpky~~Lk~~-----~fyr 331 (361)
T KOG1006|consen 307 INTCLIKDRSDRPKYDDLKKF-----PFYR 331 (361)
T ss_pred HHHHhhcccccCcchhhhhcC-----chhh
Confidence 999999999999999999986 6664
|
|
| >KOG1094|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=263.00 Aligned_cols=236 Identities=17% Similarity=0.178 Sum_probs=193.3
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
..++++|| +|-||.|+.+.-. .+..||||+++. ......+.+|+++|.+|+||||+.++++|..+ +
T Consensus 540 L~~~ekiG--------eGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~D--e 608 (807)
T KOG1094|consen 540 LRFKEKIG--------EGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQD--D 608 (807)
T ss_pred eehhhhhc--------CcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecC--C
Confidence 56799999 9999999999874 469999999987 33446789999999999999999999999988 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
.+|+||||++ +|.++|.+.... .........++.||+.|++||. ++++|||||.+.|++|+.++++||+|||.++
T Consensus 609 PicmI~EYmEnGDLnqFl~aheap--t~~t~~~vsi~tqiasgmaYLe-s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR 685 (807)
T KOG1094|consen 609 PLCMITEYMENGDLNQFLSAHELP--TAETAPGVSICTQIASGMAYLE-SLNFVHRDLATRNCLVDGEFTIKIADFGMSR 685 (807)
T ss_pred chHHHHHHHhcCcHHHHHHhccCc--ccccchhHHHHHHHHHHHHHHH-hhchhhccccccceeecCcccEEecCccccc
Confidence 9999999999 799999643222 1344455669999999999999 9999999999999999999999999999998
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh--CCCCCCCC-------------------
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN--GPLQSTNR------------------- 269 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t--G~~pf~~~------------------- 269 (852)
.+-. ...+......+-..+|||||.+.-..++.++|+|+||+.+||+|+ ...||..-
T Consensus 686 ~lys--g~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~ 763 (807)
T KOG1094|consen 686 NLYS--GDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQ 763 (807)
T ss_pred cccc--CCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcc
Confidence 5421 122222223344569999999977788999999999999999987 46676321
Q ss_pred ccccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 270 KSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 270 ~~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.-+..+.-+|..+.+++-+|++.+..+||+++++..++
T Consensus 764 ~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~l 801 (807)
T KOG1094|consen 764 VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFL 801 (807)
T ss_pred eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHH
Confidence 11234567899999999999999999999999997764
|
|
| >KOG0199|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=267.16 Aligned_cols=236 Identities=15% Similarity=0.199 Sum_probs=198.8
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCC---eEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN---EKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g---~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
..+.+.|| +|+||.|++|....-+ -.||||++.. ......+.+|+..|.+|+|||+|++|+++.+
T Consensus 112 i~l~e~LG--------~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~- 182 (1039)
T KOG0199|consen 112 IKLYELLG--------EGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD- 182 (1039)
T ss_pred HHHHHHhc--------CcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-
Confidence 34567888 9999999999886543 4789999977 3367789999999999999999999999986
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
..+.+|||.+. +|.+.|++ .....+-...++.++.||+.|+.||. ..++|||||-..||++-....+||+|||
T Consensus 183 --qp~mMV~ELaplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLe-skrlvHRDLAARNlllasprtVKI~DFG 257 (1039)
T KOG0199|consen 183 --QPAMMVFELAPLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLE-SKRLVHRDLAARNLLLASPRTVKICDFG 257 (1039)
T ss_pred --chhhHHhhhcccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHh-hhhhhhhhhhhhhheecccceeeeeccc
Confidence 46889999998 78777754 34567888889999999999999999 9999999999999999998899999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccC
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSN 274 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~ 274 (852)
+++.++.+.+. +...+.......|+|||.+....++.++|+|++||.|||||+ |..||.|... +..
T Consensus 258 LmRaLg~ned~-Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpR 336 (1039)
T KOG0199|consen 258 LMRALGENEDM-YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPR 336 (1039)
T ss_pred ceeccCCCCcc-eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCC
Confidence 99977654322 223334445568999999998999999999999999999999 5889976532 334
Q ss_pred cCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 275 IDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 275 ~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
+..+|..+.+++++||..+|..||++..|.+.
T Consensus 337 Pk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 337 PKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred CCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 56789999999999999999999999999753
|
|
| >KOG1290|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=253.08 Aligned_cols=147 Identities=14% Similarity=0.141 Sum_probs=127.9
Q ss_pred ccccccccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCC---
Q psy3914 40 PKMWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLR--- 115 (852)
Q Consensus 40 ~~m~~~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~Lr--- 115 (852)
+-++.+...|...+.+|-+.+++| .|-|.|||+|.+..+.+.||+|+.+. +...+.+..|+++|+.++
T Consensus 64 GGYHpV~IGD~F~~gRY~v~rKLG--------WGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~D 135 (590)
T KOG1290|consen 64 GGYHPVRIGDVFNGGRYHVQRKLG--------WGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGD 135 (590)
T ss_pred CCCceeeccccccCceEEEEEecc--------ccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcC
Confidence 346667777777778999999999 99999999999999999999999988 667788999999999996
Q ss_pred --CC---CcceEeeeEEcC--CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecc
Q psy3914 116 --HP---SILTFLDSVESP--SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNH 187 (852)
Q Consensus 116 --HP---nIlk~~d~~e~~--~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~D 187 (852)
|+ +||+++|.|... .+.++|+|+|++. .|..++.+. .-..++...++.|++||+.||.|||..|||||-|
T Consensus 136 p~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s--~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTD 213 (590)
T KOG1290|consen 136 PNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYS--NYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTD 213 (590)
T ss_pred CCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHh--CCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccC
Confidence 33 599999999875 2468999999999 677777543 2357889999999999999999999999999999
Q ss_pred cCCCCEEEc
Q psy3914 188 VNHTSIFIN 196 (852)
Q Consensus 188 Ikp~NIlV~ 196 (852)
|||+|||+.
T Consensus 214 lKPENvLl~ 222 (590)
T KOG1290|consen 214 LKPENVLLC 222 (590)
T ss_pred CCcceeeee
Confidence 999999984
|
|
| >KOG0196|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=271.08 Aligned_cols=237 Identities=18% Similarity=0.235 Sum_probs=203.0
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCC---eEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN---EKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g---~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
-.|.+.|| .|.||.||.|+.+..| ..||||.++. +.....+..|..+|-++.|||||++.+++...
T Consensus 631 i~Ie~VIG--------aGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks 702 (996)
T KOG0196|consen 631 VKIEKVIG--------AGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKS 702 (996)
T ss_pred eEEEEEEe--------cccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecC
Confidence 46678888 8999999999998776 6899999988 55666789999999999999999999999876
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
..+.||||||+ +|..+|++ .+++++..++.-+++.|+.|++||- +.++|||||-..||||+.+-..|++|||
T Consensus 703 --~PvMIiTEyMENGsLDsFLR~---~DGqftviQLVgMLrGIAsGMkYLs-dm~YVHRDLAARNILVNsnLvCKVsDFG 776 (996)
T KOG0196|consen 703 --KPVMIITEYMENGSLDSFLRQ---NDGQFTVIQLVGMLRGIASGMKYLS-DMNYVHRDLAARNILVNSNLVCKVSDFG 776 (996)
T ss_pred --ceeEEEhhhhhCCcHHHHHhh---cCCceEeehHHHHHHHHHHHhHHHh-hcCchhhhhhhhheeeccceEEEecccc
Confidence 88999999999 79999953 4588999999999999999999999 9999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccC
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSN 274 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~ 274 (852)
+++.+.++....+... .-.-..+|.|||.+....++.++|+||+|++|||+++ |..||-+.++ +..
T Consensus 777 LSRvledd~~~~ytt~-GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPp 855 (996)
T KOG0196|consen 777 LSRVLEDDPEAAYTTL-GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPP 855 (996)
T ss_pred ceeecccCCCcccccc-CCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCC
Confidence 9997766552222211 1112358999999988888999999999999999987 8888744322 234
Q ss_pred cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 275 IDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 275 ~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+..+|..|.+|+..||+.+-..||.+.+|+..+
T Consensus 856 PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~l 888 (996)
T KOG0196|consen 856 PMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTL 888 (996)
T ss_pred CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHH
Confidence 568899999999999999999999999999874
|
|
| >KOG1151|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-27 Score=256.62 Aligned_cols=255 Identities=16% Similarity=0.186 Sum_probs=208.7
Q ss_pred ccccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---------CCchHHHHHHHHHHHhC
Q psy3914 44 AFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---------ADTYEPALSYVKKLKTL 114 (852)
Q Consensus 44 ~~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---------~~~~~~~~~E~~~Lk~L 114 (852)
+-|..-|....+|-+...+| .|+|..||+|.+...++.||||+-.. ......+.+|.++.+.|
T Consensus 453 SQFkDHptLn~RYLlLhLLG--------rGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL 524 (775)
T KOG1151|consen 453 SQFKDHPTLNDRYLLLHLLG--------RGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL 524 (775)
T ss_pred hhhccCcchHHHHHHHHHhc--------cccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc
Confidence 45666677778899999999 99999999999999999999998655 34556788999999999
Q ss_pred CCCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceecccCCC
Q psy3914 115 RHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLIN-DADLRHNHVNHT 191 (852)
Q Consensus 115 rHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~-~~~ivH~DIkp~ 191 (852)
.||.|+++||+|.-+ ...+|-|.|||+ +|.-||+. ...+++.++..++.||+.||.||++ .-.|||-||||.
T Consensus 525 DHpRIVKlYDyfslD-tdsFCTVLEYceGNDLDFYLKQ----hklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPg 599 (775)
T KOG1151|consen 525 DHPRIVKLYDYFSLD-TDSFCTVLEYCEGNDLDFYLKQ----HKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPG 599 (775)
T ss_pred Ccceeeeeeeeeeec-cccceeeeeecCCCchhHHHHh----hhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCc
Confidence 999999999999765 367999999999 68888843 3678999999999999999999993 235999999999
Q ss_pred CEEEcc---CCcEEEcccchhhccccccCCC---CcccccccCCCcccCCccc--c--CCCCCcchhHHhHHHHHHHHHh
Q psy3914 192 SIFINS---CGEWKLGGLEYMEKISEASCIP---MKRYSRYEDQSTYQIPENS--L--SHVTKCSTDMYGLGILIWEVFN 261 (852)
Q Consensus 192 NIlV~~---~g~~KL~DFg~a~~~~~~~~~~---~~~~~~~~gt~~Y~APE~~--~--~~~~~~~sDIwSLG~ll~el~t 261 (852)
||++-. .|.+||.|||++..+++++... ....+...||.+|.|||.+ . ....++++|+||+|+|+|.++.
T Consensus 600 NILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClY 679 (775)
T KOG1151|consen 600 NILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLY 679 (775)
T ss_pred cEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhc
Confidence 999954 5889999999998776644332 2233446799999999997 2 3456789999999999999999
Q ss_pred CCCCCCCCcccc-----------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 262 GPLQSTNRKSLS-----------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 262 G~~pf~~~~~l~-----------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
|+.||....... .-.-++.+...+|++||..--+.|..+.++..+ +||..
T Consensus 680 GrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d-----pyllP 746 (775)
T KOG1151|consen 680 GRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD-----PYLLP 746 (775)
T ss_pred cCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC-----ccccc
Confidence 999995431110 113567889999999999999999999988775 77754
|
|
| >KOG0695|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.2e-27 Score=243.49 Aligned_cols=248 Identities=14% Similarity=0.214 Sum_probs=200.8
Q ss_pred CCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhC-CCCCcceEe
Q psy3914 50 ASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTL-RHPSILTFL 123 (852)
Q Consensus 50 p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~L-rHPnIlk~~ 123 (852)
...-..|.+...|| .|+|.+|..++.+.+.+.+|+|++++ +......+.|-.+...- +||.++-++
T Consensus 246 ~l~l~df~ll~vig--------rgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglh 317 (593)
T KOG0695|consen 246 GLGLQDFDLLRVIG--------RGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLH 317 (593)
T ss_pred ccccccceeeeeec--------CcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehh
Confidence 34556789999999 99999999999999999999999987 34455666666655554 699999999
Q ss_pred eeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcE
Q psy3914 124 DSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEW 201 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~ 201 (852)
..|+++ ..+++|.||+. +|--++++ ..+++++.+..+...|+-||.||| ..|||.||||.+||+++..|++
T Consensus 318 scfqte--srlffvieyv~ggdlmfhmqr----qrklpeeharfys~ei~lal~flh-~rgiiyrdlkldnvlldaeghi 390 (593)
T KOG0695|consen 318 SCFQTE--SRLFFVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEICLALNFLH-ERGIIYRDLKLDNVLLDAEGHI 390 (593)
T ss_pred hhhccc--ceEEEEEEEecCcceeeehhh----hhcCcHHHhhhhhHHHHHHHHHHh-hcCeeeeeccccceEEccCCce
Confidence 999998 89999999998 56655532 367999999999999999999999 9999999999999999999999
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCC--CCc---------
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQST--NRK--------- 270 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~--~~~--------- 270 (852)
||.|+|.+.. .-.+....+.++|||.|.|||++.+..|..++|.|+||++++||+.|+.||. |..
T Consensus 391 kltdygmcke----~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedy 466 (593)
T KOG0695|consen 391 KLTDYGMCKE----GLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDY 466 (593)
T ss_pred eecccchhhc----CCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHH
Confidence 9999999872 3334555668999999999999999999999999999999999999999994 111
Q ss_pred --------cccCcCCCChhHHHHHHHhccCCCCCCCC------HHHHHHhhcCCCCCCcchHHHH
Q psy3914 271 --------SLSNIDNIPENLKRVYLELISERPNQRPN------PADFIMRNRKPGGYFKNDLIDA 321 (852)
Q Consensus 271 --------~l~~~~~ip~~L~~li~~lL~~nP~~Rps------~~elL~~l~~~~~fF~n~lv~~ 321 (852)
++..+..++-....+++..|+.||+.|.. +.++..| +||.+.-.+.
T Consensus 467 lfqvilekqiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h-----~ffr~idwd~ 526 (593)
T KOG0695|consen 467 LFQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSH-----AFFRSIDWDL 526 (593)
T ss_pred HHHHHhhhcccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcc-----hhhhhCCHHH
Confidence 11223344445567888999999999853 3444443 6666544433
|
|
| >KOG0664|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-28 Score=249.11 Aligned_cols=241 Identities=14% Similarity=0.206 Sum_probs=188.1
Q ss_pred CCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 50 ASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 50 p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
|-...+.+-.+.|| -|.||.||..++..+|+.|++|++.. -.....+.+|+++|.-.+|.||+..+|+
T Consensus 49 Pqqq~Di~PDRPIG--------YGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDI 120 (449)
T KOG0664|consen 49 PQQQQDIQPDRPIG--------YGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDI 120 (449)
T ss_pred ccccccCCCCCccc--------ccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHh
Confidence 33444455578899 79999999999999999999998876 1234567899999999999999999998
Q ss_pred EEcCCC---CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcE
Q psy3914 126 VESPSK---SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEW 201 (852)
Q Consensus 126 ~e~~~~---~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~ 201 (852)
..-..- ..+|++||.+. +|...+ -....++...++-++|||++||+||| +++|.||||||.|++|+.+..+
T Consensus 121 LQPph~dfFqEiYV~TELmQSDLHKII----VSPQ~Ls~DHvKVFlYQILRGLKYLH-sA~ILHRDIKPGNLLVNSNCvL 195 (449)
T KOG0664|consen 121 LQPANPSFFQELYVLTELMQSDLHKII----VSPQALTPDHVKVFVYQILRGLKYLH-TANILHRDIKPGNLLVNSNCIL 195 (449)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhee----ccCCCCCcchhhhhHHHHHhhhHHHh-hcchhhccCCCccEEeccCceE
Confidence 865311 13788888887 455444 55678899999999999999999999 9999999999999999999999
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccCc-----
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI----- 275 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~~----- 275 (852)
||||||+++.-+.+. .......+.|..|+|||++ ....|+.++||||+|||+.|++..+..|.....++++
T Consensus 196 KICDFGLARvee~d~---~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItd 272 (449)
T KOG0664|consen 196 KICDFGLARTWDQRD---RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIID 272 (449)
T ss_pred Eecccccccccchhh---hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHH
Confidence 999999998422111 1122234557799999998 6677999999999999999999888777543322211
Q ss_pred ----------------------------------CCC------ChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 276 ----------------------------------DNI------PENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 276 ----------------------------------~~i------p~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
-.+ -.+...++..|+..+|.+|.+..+.+.|
T Consensus 273 LLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 273 LLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred HhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 011 1234567888999999999999988876
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-26 Score=286.79 Aligned_cols=225 Identities=18% Similarity=0.217 Sum_probs=178.3
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEE
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVY 135 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~y 135 (852)
|...+.|| .|++|.||+|+.+.++..|+||.+..... ...+|++.+++++||||+++++++.+. ...|
T Consensus 692 ~~~~~~ig--------~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~l~~l~HpnIv~~~~~~~~~--~~~~ 759 (968)
T PLN00113 692 LKEENVIS--------RGKKGASYKGKSIKNGMQFVVKEINDVNS--IPSSEIADMGKLQHPNIVKLIGLCRSE--KGAY 759 (968)
T ss_pred CCcccEEc--------cCCCeeEEEEEECCCCcEEEEEEccCCcc--ccHHHHHHHhhCCCCCcceEEEEEEcC--CCCE
Confidence 34456788 89999999999999999999999875222 234568899999999999999999987 8899
Q ss_pred EEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc--CCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 136 LAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLIND--ADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 136 IVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~--~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
+||||+. +|.++++ .+++..+..++.||+.||.|||.. .+++||||||+||+++.++..++. |+....
T Consensus 760 lv~Ey~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~ 831 (968)
T PLN00113 760 LIHEYIEGKNLSEVLR-------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGL 831 (968)
T ss_pred EEEeCCCCCcHHHHHh-------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccc
Confidence 9999998 7998883 367888999999999999999942 389999999999999998887765 444321
Q ss_pred cccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----------------c-
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-----------------S- 273 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-----------------~- 273 (852)
... .....+++.|+|||++.+..++.++|||||||++|||++|+.||...... .
T Consensus 832 ~~~--------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 903 (968)
T PLN00113 832 LCT--------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDM 903 (968)
T ss_pred ccc--------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhh
Confidence 110 01235678999999998888999999999999999999999997421100 0
Q ss_pred ----Cc-C--CC----ChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 274 ----NI-D--NI----PENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 274 ----~~-~--~i----p~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
.+ . .. ...+.+++.+|++.+|.+||++.++++.++
T Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~ 949 (968)
T PLN00113 904 WIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLE 949 (968)
T ss_pred eeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHH
Confidence 00 0 01 124667889999999999999999998754
|
|
| >KOG2052|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.8e-26 Score=245.69 Aligned_cols=235 Identities=18% Similarity=0.230 Sum_probs=183.4
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHh--CCCCCcceEeeeEEcC--CC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKT--LRHPSILTFLDSVESP--SK 131 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~--LrHPnIlk~~d~~e~~--~~ 131 (852)
.++.+.|| .|.||.||+|..+ |+.||||+|.. .......+|.++.++ |||+||+.|+..-..+ +-
T Consensus 213 I~L~e~IG--------kGRyGEVwrG~wr--Ge~VAVKiF~s-rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~ 281 (513)
T KOG2052|consen 213 IVLQEIIG--------KGRFGEVWRGRWR--GEDVAVKIFSS-RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW 281 (513)
T ss_pred eEEEEEec--------Cccccceeecccc--CCceEEEEecc-cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence 57789999 9999999999995 89999999997 334566777777665 5999999999875543 23
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CceecccCCCCEEEccCCcEE
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDA-------DLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~-------~ivH~DIkp~NIlV~~~g~~K 202 (852)
+.+++||+|-+ +|++||.. ..++.....++++.++.||++||..- .|.|||||..||+|.++|...
T Consensus 282 TQLwLvTdYHe~GSL~DyL~r-----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~ 356 (513)
T KOG2052|consen 282 TQLWLVTDYHEHGSLYDYLNR-----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 356 (513)
T ss_pred EEEEEeeecccCCcHHHHHhh-----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE
Confidence 57999999999 89999943 57889999999999999999999432 489999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccC------CCCCcchhHHhHHHHHHHHHhC----------CCCC
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS------HVTKCSTDMYGLGILIWEVFNG----------PLQS 266 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~------~~~~~~sDIwSLG~ll~el~tG----------~~pf 266 (852)
|+|||++..+..............+||.+|||||++.. ...-..+||||||.++||+.-. ++||
T Consensus 357 IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Py 436 (513)
T KOG2052|consen 357 IADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPY 436 (513)
T ss_pred EeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCc
Confidence 99999998766543333333446789999999999721 1122469999999999999742 4677
Q ss_pred CCC----cccc----------CcCCCCh---------hHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 267 TNR----KSLS----------NIDNIPE---------NLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 267 ~~~----~~l~----------~~~~ip~---------~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
++- .+.+ ....+|. .+..+++.||..||..|.|+-.+-+.
T Consensus 437 yd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKt 499 (513)
T KOG2052|consen 437 YDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKT 499 (513)
T ss_pred ccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHH
Confidence 532 1111 1233433 36788999999999999998777654
|
|
| >KOG1152|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-26 Score=256.19 Aligned_cols=193 Identities=20% Similarity=0.230 Sum_probs=169.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----------CCchHHHHHHHHHHHhCC---CCCcce
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----------ADTYEPALSYVKKLKTLR---HPSILT 121 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----------~~~~~~~~~E~~~Lk~Lr---HPnIlk 121 (852)
.|+..+++| .|.||.|+.|.+++++..|.||.+.+ +.....+-.|+++|.+|+ |+||++
T Consensus 562 ~yttlq~lG--------~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlK 633 (772)
T KOG1152|consen 562 DYTTLQPLG--------EGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILK 633 (772)
T ss_pred cceeeeecc--------ccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhh
Confidence 489999999 89999999999999999999998877 334445668999999998 999999
Q ss_pred EeeeEEcCCCCeEEEEEeecc---cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC
Q psy3914 122 FLDSVESPSKSLVYLAVEYVE---PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC 198 (852)
Q Consensus 122 ~~d~~e~~~~~~~yIVtE~v~---~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~ 198 (852)
++++||++ +++||+||.-. +|.++++ ....++|.+.+.+++||+.|+++|| +.+|||||||-+||.|+.+
T Consensus 634 lLdfFEdd--d~yyl~te~hg~gIDLFd~IE----~kp~m~E~eAk~IFkQV~agi~hlh-~~~ivhrdikdenvivd~~ 706 (772)
T KOG1152|consen 634 LLDFFEDD--DYYYLETEVHGEGIDLFDFIE----FKPRMDEPEAKLIFKQVVAGIKHLH-DQGIVHRDIKDENVIVDSN 706 (772)
T ss_pred hhheeecC--CeeEEEecCCCCCcchhhhhh----ccCccchHHHHHHHHHHHhcccccc-ccCceecccccccEEEecC
Confidence 99999999 99999999987 6999984 3478999999999999999999999 9999999999999999999
Q ss_pred CcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCC-CcchhHHhHHHHHHHHHhCCCCCCC
Q psy3914 199 GEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTN 268 (852)
Q Consensus 199 g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~-~~~sDIwSLG~ll~el~tG~~pf~~ 268 (852)
|-+||+|||.+.-... ..+..++||..|.|||++.+..| +..-|||+||+++|.+.....||++
T Consensus 707 g~~klidfgsaa~~ks------gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 707 GFVKLIDFGSAAYTKS------GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred CeEEEeeccchhhhcC------CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 9999999999764322 12335789999999999965554 5679999999999999999888854
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-25 Score=255.77 Aligned_cols=248 Identities=15% Similarity=0.132 Sum_probs=178.6
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEc----------------CCCeEEEEEEEeCCC----------------c
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK----------------GSNEKVTIFLNDSAD----------------T 100 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k----------------~~g~~VaVKv~~~~~----------------~ 100 (852)
..+|++.++|| +|+||+||+|... ..+..|+||.+.... .
T Consensus 144 ~d~F~i~~~LG--------~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~ 215 (507)
T PLN03224 144 SDDFQLRDKLG--------GGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGS 215 (507)
T ss_pred ccCceEeeEee--------cCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcc
Confidence 34799999999 9999999999752 245689999986511 1
Q ss_pred hHHHHHHHHHHHhCCCCCc-----ceEeeeEEcC------CCCeEEEEEeecc--cHHHHHHhhhh--------------
Q psy3914 101 YEPALSYVKKLKTLRHPSI-----LTFLDSVESP------SKSLVYLAVEYVE--PIFYHLDNTLK-------------- 153 (852)
Q Consensus 101 ~~~~~~E~~~Lk~LrHPnI-----lk~~d~~e~~------~~~~~yIVtE~v~--~L~~~L~~~~~-------------- 153 (852)
.+....|+.++.+++|.++ +++++++... .+...|+|+||+. +|.++|.....
T Consensus 216 ~e~~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~ 295 (507)
T PLN03224 216 AETGMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGK 295 (507)
T ss_pred cchhHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCC
Confidence 1223446677777776554 5666665431 1256899999998 68888853210
Q ss_pred ------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCccccccc
Q psy3914 154 ------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYE 227 (852)
Q Consensus 154 ------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~ 227 (852)
....++...+..++.||+.+|.||| +.+++||||||+||+++.++.+||+|||++........ .......
T Consensus 296 ~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH-~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~---~~~~~g~ 371 (507)
T PLN03224 296 KIPDNMPQDKRDINVIKGVMRQVLTGLRKLH-RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN---FNPLYGM 371 (507)
T ss_pred chhhhcccccCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc---cCccccC
Confidence 0123456778889999999999999 89999999999999999999999999999864322110 0111123
Q ss_pred CCCcccCCccccCCC----------------------CCcchhHHhHHHHHHHHHhCCC-CCCCC---------------
Q psy3914 228 DQSTYQIPENSLSHV----------------------TKCSTDMYGLGILIWEVFNGPL-QSTNR--------------- 269 (852)
Q Consensus 228 gt~~Y~APE~~~~~~----------------------~~~~sDIwSLG~ll~el~tG~~-pf~~~--------------- 269 (852)
+++.|+|||++.... .....|+||+||++|+|++|.+ |+.+.
T Consensus 372 ~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~ 451 (507)
T PLN03224 372 LDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLN 451 (507)
T ss_pred CCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHH
Confidence 467999999973211 1124799999999999999865 55311
Q ss_pred ---------ccccCcCCCChhHHHHHHHhccCCC---CCCCCHHHHHHhhcCCCCCCcch
Q psy3914 270 ---------KSLSNIDNIPENLKRVYLELISERP---NQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 270 ---------~~l~~~~~ip~~L~~li~~lL~~nP---~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....+..+++...+++++||..+| .+|+|+.++|+| +||.+.
T Consensus 452 ~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H-----p~f~~~ 506 (507)
T PLN03224 452 RWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH-----RFFLPE 506 (507)
T ss_pred HHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC-----CCcCCC
Confidence 0112235678889999999999766 689999999998 999764
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=219.12 Aligned_cols=205 Identities=22% Similarity=0.377 Sum_probs=177.8
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCCc---hHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cHHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSADT---YEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFY 146 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~---~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~ 146 (852)
.|+++.||.+....+++.++||++..... ...+.+|++.++.++|++|+++++++... ...++++|++. +|..
T Consensus 3 ~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 3 EGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE--NHLYLVMEYCEGGSLKD 80 (215)
T ss_pred cCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC--CeEEEEEecCCCCcHHH
Confidence 78999999999988899999999998443 47899999999999999999999999987 89999999999 7988
Q ss_pred HHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc-CCcEEEcccchhhccccccCCCCccccc
Q psy3914 147 HLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS-CGEWKLGGLEYMEKISEASCIPMKRYSR 225 (852)
Q Consensus 147 ~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~-~g~~KL~DFg~a~~~~~~~~~~~~~~~~ 225 (852)
++.... ..++...+..++.+++.+|.+|| ..+++|+||+|.||+++. ++.++|+|||.+........ ....
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh-~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~----~~~~ 152 (215)
T cd00180 81 LLKENE---GKLSEDEILRILLQILEGLEYLH-SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS----LLKT 152 (215)
T ss_pred HHHhcc---CCCCHHHHHHHHHHHHHHHHHHH-hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc----hhhc
Confidence 884321 36789999999999999999999 889999999999999999 89999999999874432111 1223
Q ss_pred ccCCCcccCCccccCC-CCCcchhHHhHHHHHHHHHhCCCCCCCCccccCcCCCChhHHHHHHHhccCCCCCCCCHHHHH
Q psy3914 226 YEDQSTYQIPENSLSH-VTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNIDNIPENLKRVYLELISERPNQRPNPADFI 304 (852)
Q Consensus 226 ~~gt~~Y~APE~~~~~-~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL 304 (852)
..+...|++||..... .++...|+|+||++++++ ..+.+++.+|+..+|..||++.+++
T Consensus 153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------~~~~~~l~~~l~~~p~~R~~~~~l~ 212 (215)
T cd00180 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------PELKDLIRKMLQKDPEKRPSAKEIL 212 (215)
T ss_pred ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------HHHHHHHHHHhhCCcccCcCHHHHh
Confidence 4456689999998655 778899999999999999 6899999999999999999999998
Q ss_pred Hh
Q psy3914 305 MR 306 (852)
Q Consensus 305 ~~ 306 (852)
++
T Consensus 213 ~~ 214 (215)
T cd00180 213 EH 214 (215)
T ss_pred hC
Confidence 75
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0984|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-25 Score=221.44 Aligned_cols=196 Identities=14% Similarity=0.131 Sum_probs=163.9
Q ss_pred eEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCCCC
Q psy3914 57 EVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSKS 132 (852)
Q Consensus 57 ~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~~~ 132 (852)
.-++.+| .|++|.|-.-++..+|...|+|.+.. .+......+|+.+..+. .+|.++.+++.+..+ .
T Consensus 49 ~~i~elG--------rGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re--g 118 (282)
T KOG0984|consen 49 VGIEELG--------RGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE--G 118 (282)
T ss_pred hhhhhhc--------CCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcc--c
Confidence 3467788 89999999999999999999998876 33344556666655443 599999999998887 8
Q ss_pred eEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 133 LVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 133 ~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
.++|.||.+. +|..+..+.....+.++|..+-.+...+++||.|||+...+||||+||+||+|+.+|.+|+||||++..
T Consensus 119 dvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~ 198 (282)
T KOG0984|consen 119 DVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGY 198 (282)
T ss_pred cEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccccccee
Confidence 8999999999 788877777788889999999999999999999999999999999999999999999999999999865
Q ss_pred cccccCCCCcccccccCCCcccCCccc----cCCCCCcchhHHhHHHHHHHHHhCCCCCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENS----LSHVTKCSTDMYGLGILIWEVFNGPLQST 267 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~----~~~~~~~~sDIwSLG~ll~el~tG~~pf~ 267 (852)
+.+..... ...|-..|+|||.+ ....|+.++||||||+.++||.++++||.
T Consensus 199 L~dSiAkt-----~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 199 LVDSIAKT-----MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred ehhhhHHH-----HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence 43321111 12345589999997 34579999999999999999999999984
|
|
| >KOG3653|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-25 Score=241.56 Aligned_cols=235 Identities=14% Similarity=0.149 Sum_probs=180.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHH--hCCCCCcceEeeeEEcCC-
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLK--TLRHPSILTFLDSVESPS- 130 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk--~LrHPnIlk~~d~~e~~~- 130 (852)
.+.++.+.+| +|.||.||+|.. +++.||||+|.. ...+.+.+|-.+.. .|+|+||++|+..-+..+
T Consensus 210 ~pl~l~eli~--------~Grfg~V~KaqL--~~~~VAVKifp~-~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~ 278 (534)
T KOG3653|consen 210 DPLQLLELIG--------RGRFGCVWKAQL--DNRLVAVKIFPE-QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTA 278 (534)
T ss_pred CchhhHHHhh--------cCccceeehhhc--cCceeEEEecCH-HHHHHHHhHHHHHhccCccchhHHHhhchhccCCc
Confidence 3467788898 999999999988 579999999996 44566677766655 568999999998876542
Q ss_pred -CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--------CceecccCCCCEEEccCC
Q psy3914 131 -KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDA--------DLRHNHVNHTSIFINSCG 199 (852)
Q Consensus 131 -~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~--------~ivH~DIkp~NIlV~~~g 199 (852)
+..++|||||.. +|.++|.. ..++......++..+++||+|||++. .|+|||||..||||.+++
T Consensus 279 ~~~eywLVt~fh~kGsL~dyL~~-----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~Dl 353 (534)
T KOG3653|consen 279 DRMEYWLVTEFHPKGSLCDYLKA-----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDL 353 (534)
T ss_pred cccceeEEeeeccCCcHHHHHHh-----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCC
Confidence 247999999998 89999953 57889999999999999999999654 489999999999999999
Q ss_pred cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCC------CCCcchhHHhHHHHHHHHHhCCC---------
Q psy3914 200 EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSH------VTKCSTDMYGLGILIWEVFNGPL--------- 264 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~------~~~~~sDIwSLG~ll~el~tG~~--------- 264 (852)
...|+|||++..+.. ..+.......+||.+|||||++.+. ..-.+.||||+|.++|||++...
T Consensus 354 TccIaDFGLAl~~~p--~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~ 431 (534)
T KOG3653|consen 354 TCCIADFGLALRLEP--GKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPE 431 (534)
T ss_pred cEEeeccceeEEecC--CCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCc
Confidence 999999999986642 2222223347899999999997322 12247999999999999998632
Q ss_pred ---CCC---C-Cccc----------cCcCCCC---------hhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 265 ---QST---N-RKSL----------SNIDNIP---------ENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 265 ---pf~---~-~~~l----------~~~~~ip---------~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
||. | ...+ +....+| ..+.+.+..||..||+.|.|+.-+.+.
T Consensus 432 Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR 499 (534)
T KOG3653|consen 432 YQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEER 499 (534)
T ss_pred ccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHH
Confidence 221 0 0111 1123343 346788999999999999998766554
|
|
| >KOG0200|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=258.27 Aligned_cols=238 Identities=17% Similarity=0.271 Sum_probs=192.8
Q ss_pred eEeccccCCCCCCcccCCceEEEEEEEcC-------CCeEEEEEEEeC---CCchHHHHHHHHHHHhCC-CCCcceEeee
Q psy3914 57 EVGEPAVSFSGCFTQKHTFWKFHGGKKKG-------SNEKVTIFLNDS---ADTYEPALSYVKKLKTLR-HPSILTFLDS 125 (852)
Q Consensus 57 ~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-------~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~ 125 (852)
.+++.+| .|.||.|++|.-+. ....|+||.+.. ....+.+..|+++|+.+. ||||+.+++.
T Consensus 299 ~~~~~lg--------~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 299 KLGKYLG--------EGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred cccceee--------cccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 4566787 89999999997431 146899998876 445678999999999995 9999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhh---hc-------C--CCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCC
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTL---KE-------N--NEKKQIYISWGIFQITRALSFLINDADLRHNHVNHT 191 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~---~~-------~--~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~ 191 (852)
+... +.+++|+||+. +|..+|+... .. . ..++...+..+.+||+.|+.||+ +.++|||||-..
T Consensus 371 ~t~~--~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~-~~~~vHRDLAaR 447 (609)
T KOG0200|consen 371 CTQD--GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA-SVPCVHRDLAAR 447 (609)
T ss_pred eccC--CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh-hCCccchhhhhh
Confidence 9876 89999999999 7999997544 11 1 13888999999999999999999 999999999999
Q ss_pred CEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCC-
Q psy3914 192 SIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNR- 269 (852)
Q Consensus 192 NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~- 269 (852)
||+|+.+..+||+|||+++................ -...|||||.+....++.++|+||+|+++||+|+ |..||.+-
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~-LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGT-LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCceEecCCCCc-cceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence 99999999999999999984332111110110000 1236999999988999999999999999999999 67777652
Q ss_pred ------------ccccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 270 ------------KSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 270 ------------~~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
..+..+..+++++.++++.||+.+|+.||++.++.+.
T Consensus 527 ~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~ 575 (609)
T KOG0200|consen 527 PTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEF 575 (609)
T ss_pred cHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 1345567889999999999999999999999999874
|
|
| >KOG0576|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.3e-26 Score=255.15 Aligned_cols=247 Identities=15% Similarity=0.237 Sum_probs=207.0
Q ss_pred cccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceE
Q psy3914 45 FFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTF 122 (852)
Q Consensus 45 ~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~ 122 (852)
++.|+|. -.|++..+|| .|+||.||+++++.+++..+||+++. ......+..|+-+++..+||||+.|
T Consensus 8 isrrnP~--ddyellqrvg--------sgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay 77 (829)
T KOG0576|consen 8 ISRRNPQ--DDYELLQRVG--------SGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAY 77 (829)
T ss_pred hhhcCCc--cchhheeeec--------CCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHH
Confidence 3445443 4599999999 89999999999999999999999988 5667788999999999999999999
Q ss_pred eeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc
Q psy3914 123 LDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE 200 (852)
Q Consensus 123 ~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~ 200 (852)
++.+... ..++|.||||. +|.+.. ...+.+++.+|.+.++..+.+|+||| ..|-+|||||-.||++++.|+
T Consensus 78 ~gsylr~--dklwicMEycgggslQdiy----~~TgplselqiayvcRetl~gl~ylh-s~gk~hRdiKGanilltd~gD 150 (829)
T KOG0576|consen 78 FGSYLRR--DKLWICMEYCGGGSLQDIY----HVTGPLSELQIAYVCRETLQGLKYLH-SQGKIHRDIKGANILLTDEGD 150 (829)
T ss_pred Hhhhhhh--cCcEEEEEecCCCccccee----eecccchhHHHHHHHhhhhccchhhh-cCCcccccccccceeecccCc
Confidence 9999877 88999999999 576654 34588999999999999999999999 899899999999999999999
Q ss_pred EEEcccchhhccccccCCCCcccccccCCCcccCCccc---cCCCCCcchhHHhHHHHHHHHHhCCCCCCCC--------
Q psy3914 201 WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENS---LSHVTKCSTDMYGLGILIWEVFNGPLQSTNR-------- 269 (852)
Q Consensus 201 ~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~---~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~-------- 269 (852)
+||.|||.+..++. .......+.||+.|||||+. .+..|...+|+|++|+...|+-.-++|...-
T Consensus 151 vklaDfgvsaqita----ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~L 226 (829)
T KOG0576|consen 151 VKLADFGVSAQITA----TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFL 226 (829)
T ss_pred eeecccCchhhhhh----hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHH
Confidence 99999999875432 23334468899999999995 6778899999999999999986654443111
Q ss_pred --------ccccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 270 --------KSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 270 --------~~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
..++...+-.+.+.+|++.+|..||++||++..+|.| +|....
T Consensus 227 mTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h-----~fvs~~ 277 (829)
T KOG0576|consen 227 MTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH-----PFVSQT 277 (829)
T ss_pred hhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheec-----eeeccc
Confidence 2223334567789999999999999999999999997 666544
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-23 Score=214.00 Aligned_cols=195 Identities=24% Similarity=0.351 Sum_probs=166.2
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
|.+++.|+ .|+++.||.|....+++.|+||.+.... ....+.+|++.++.++|+||+++++.+... .
T Consensus 1 ~~~~~~i~--------~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~--~ 70 (225)
T smart00221 1 YELGKKLG--------EGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDP--E 70 (225)
T ss_pred CceeeEee--------cCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecC--C
Confidence 56788888 8999999999999889999999998732 567899999999999999999999999887 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCC-CCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNE-KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~-l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..|+++|++. +|.+++... .. +++..+..++.|++.+|.||| +.+++|+||+|.||+++.++.++|+|||++
T Consensus 71 ~~~~v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh-~~~i~h~di~~~ni~v~~~~~~~l~d~g~~ 145 (225)
T smart00221 71 PLYLVMEYCEGGDLFDYLRKK----GGKLSEEEARFYLRQILEALEYLH-SLGIVHRDLKPENILLGMDGLVKLADFGLA 145 (225)
T ss_pred ceEEEEeccCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEEcCCCCEEEeeCcee
Confidence 8999999998 688887432 23 788999999999999999999 889999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCC
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTN 268 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~ 268 (852)
........ .......++..|++||.. ....++.++|+|+||+++|+|++|+.||.+
T Consensus 146 ~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 146 RFIHRDLA---ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eEecCccc---ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 75432210 011234566789999998 666777799999999999999999999944
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1025|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=240.35 Aligned_cols=233 Identities=13% Similarity=0.140 Sum_probs=190.6
Q ss_pred eEeccccCCCCCCcccCCceEEEEEEEcCCC----eEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 57 EVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN----EKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 57 ~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g----~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
...+.|| .|.||+||+|...-.| -+|+||++.. ......+..|+-+|.+|+|||++++++++...
T Consensus 699 kk~kvLG--------sgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s 770 (1177)
T KOG1025|consen 699 KKDKVLG--------SGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS 770 (1177)
T ss_pred hhhceec--------cccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc
Confidence 3467788 8999999999775444 5788998876 33456788889999999999999999999875
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
.+.|||+|++ .|.++++. ....+-......+++||++|+.||| +..+|||||-..||||.+-..+|+.|||
T Consensus 771 ---~~qlvtq~mP~G~LlDyvr~---hr~~igsq~lLnw~~QIAkgM~YLe-~qrlVHrdLaaRNVLVksP~hvkitdfg 843 (1177)
T KOG1025|consen 771 ---TLQLVTQLMPLGCLLDYVRE---HRDNIGSQDLLNWCYQIAKGMKYLE-EQRLVHRDLAARNVLVKSPNHVKITDFG 843 (1177)
T ss_pred ---hHHHHHHhcccchHHHHHHH---hhccccHHHHHHHHHHHHHHHHHHH-hcchhhhhhhhhheeecCCCeEEEEecc
Confidence 4899999998 79999854 3367778889999999999999999 9999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCC------------ccccC
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNR------------KSLSN 274 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~------------~~l~~ 274 (852)
++.....+... ...+...-.+.|+|=|.+....|+.++|+|||||.+||++| |..|+.+. ..+.+
T Consensus 844 la~ll~~d~~e--y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsq 921 (1177)
T KOG1025|consen 844 LAKLLAPDEKE--YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQ 921 (1177)
T ss_pred hhhccCccccc--ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCC
Confidence 99854322111 11112222347888888888899999999999999999998 78887543 23566
Q ss_pred cCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 275 IDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 275 ~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
+..++-++..++.+||..|+..||++.++...
T Consensus 922 PpiCtiDVy~~mvkCwmid~~~rp~fkel~~~ 953 (1177)
T KOG1025|consen 922 PPICTIDVYMVMVKCWMIDADSRPTFKELAEE 953 (1177)
T ss_pred CCCccHHHHHHHHHHhccCcccCccHHHHHHH
Confidence 77788899999999999999999999988764
|
|
| >KOG1167|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=227.54 Aligned_cols=241 Identities=15% Similarity=0.185 Sum_probs=196.3
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcC---CCeEEEEEEEeCCCchHHHHHHHHHHHhCC-CCCcceEeeeEEc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG---SNEKVTIFLNDSADTYEPALSYVKKLKTLR-HPSILTFLDSVES 128 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~---~g~~VaVKv~~~~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~ 128 (852)
...|.+.++|| .|+|++||+|+... .+..|++|.+........+.+|+++|..+. +-||+++.+.+..
T Consensus 35 ~~~~~~v~kig--------eGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 35 SNAYKVVNKIG--------EGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhcccc--------ccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 34589999999 99999999999887 789999999988677788999999999997 9999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc-CCcEEEcc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS-CGEWKLGG 205 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~-~g~~KL~D 205 (852)
. +...||+||++ ...+++ ..++..++.++++.++.||.++| ..|||||||||+|++.+. .+.-.|.|
T Consensus 107 n--d~v~ivlp~~~H~~f~~l~-------~~l~~~~i~~Yl~~ll~Al~~~h-~~GIvHRDiKpsNFL~n~~t~rg~LvD 176 (418)
T KOG1167|consen 107 N--DQVAIVLPYFEHDRFRDLY-------RSLSLAEIRWYLRNLLKALAHLH-KNGIVHRDIKPSNFLYNRRTQRGVLVD 176 (418)
T ss_pred C--CeeEEEecccCccCHHHHH-------hcCCHHHHHHHHHHHHHHhhhhh-ccCccccCCCccccccccccCCceEEe
Confidence 7 99999999999 455555 35668899999999999999999 999999999999999986 67889999
Q ss_pred cchhhccccc------------cCC-----------------CCcc-----------cccccCCCcccCCccc-cCCCCC
Q psy3914 206 LEYMEKISEA------------SCI-----------------PMKR-----------YSRYEDQSTYQIPENS-LSHVTK 244 (852)
Q Consensus 206 Fg~a~~~~~~------------~~~-----------------~~~~-----------~~~~~gt~~Y~APE~~-~~~~~~ 244 (852)
||++...+.. ... +... .-...||++|+|||++ .....+
T Consensus 177 FgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qt 256 (418)
T KOG1167|consen 177 FGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQT 256 (418)
T ss_pred chhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcC
Confidence 9998721110 000 0000 0124599999999998 556677
Q ss_pred cchhHHhHHHHHHHHHhCCCCCCCC--------------------------cc--c---cC-------------------
Q psy3914 245 CSTDMYGLGILIWEVFNGPLQSTNR--------------------------KS--L---SN------------------- 274 (852)
Q Consensus 245 ~~sDIwSLG~ll~el~tG~~pf~~~--------------------------~~--l---~~------------------- 274 (852)
.++||||.|+|+..++++.+||... .. + .+
T Consensus 257 taiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~ 336 (418)
T KOG1167|consen 257 TAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESI 336 (418)
T ss_pred CccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhc
Confidence 8999999999999999999998311 00 0 00
Q ss_pred -------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 275 -------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 275 -------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
..-+|..+.+++.+|+..||.+|.++++.|+| +||..
T Consensus 337 ~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH-----pFF~~ 386 (418)
T KOG1167|consen 337 YKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH-----PFFDE 386 (418)
T ss_pred ccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC-----cCCcc
Confidence 01235578899999999999999999999998 99983
|
|
| >KOG1345|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-23 Score=214.34 Aligned_cols=226 Identities=15% Similarity=0.189 Sum_probs=178.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCC-CCCcceEeee-EEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLR-HPSILTFLDS-VESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~-~e~~~~ 131 (852)
.|+|.+.+| .|.||.+-++.++.+++.+++|.+.. ......+.+|+..--.|. |.||+.-|++ |++.
T Consensus 25 ~y~I~k~lg--------eG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~-- 94 (378)
T KOG1345|consen 25 VYTINKQLG--------EGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTS-- 94 (378)
T ss_pred hhhHHHHhc--------ccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcC--
Confidence 499999999 99999999999999999999999987 445567788877655664 8999998886 6665
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc--CCcEEEcccc
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS--CGEWKLGGLE 207 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~--~g~~KL~DFg 207 (852)
+.+++++||++ +|...+. ...+-+...+.++.|++.||.||| +.++||||||.+||+|-. .-.+||||||
T Consensus 95 d~YvF~qE~aP~gdL~snv~-----~~GigE~~~K~v~~ql~SAi~fMH-sknlVHRdlK~eNiLif~~df~rvKlcDFG 168 (378)
T KOG1345|consen 95 DAYVFVQEFAPRGDLRSNVE-----AAGIGEANTKKVFAQLLSAIEFMH-SKNLVHRDLKAENILIFDADFYRVKLCDFG 168 (378)
T ss_pred ceEEEeeccCccchhhhhcC-----cccccHHHHHHHHHHHHHHHHHhh-ccchhhcccccceEEEecCCccEEEeeecc
Confidence 78999999998 6766552 256888999999999999999999 999999999999999965 3469999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccc-----cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENS-----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS----------- 271 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-----~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~----------- 271 (852)
..+..+... . ...-+..|.+||+. ......+.+|+|.||+++|.+++|.+||.....
T Consensus 169 ~t~k~g~tV----~---~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w 241 (378)
T KOG1345|consen 169 LTRKVGTTV----K---YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQW 241 (378)
T ss_pred cccccCcee----h---hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHH
Confidence 987543211 1 11223479999985 233456789999999999999999999953211
Q ss_pred --------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHH
Q psy3914 272 --------LSNIDNIPENLKRVYLELISERPNQRPNPADF 303 (852)
Q Consensus 272 --------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~el 303 (852)
.+.+..+++.+..++++-|.+.+++|-.+-+.
T Consensus 242 ~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~ 281 (378)
T KOG1345|consen 242 LKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTA 281 (378)
T ss_pred hcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHH
Confidence 12235566778889999999999988444333
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.5e-23 Score=255.32 Aligned_cols=197 Identities=17% Similarity=0.216 Sum_probs=143.6
Q ss_pred HHhCCC-CCcceEeeeEEcC-----CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCc
Q psy3914 111 LKTLRH-PSILTFLDSVESP-----SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADL 183 (852)
Q Consensus 111 Lk~LrH-PnIlk~~d~~e~~-----~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~i 183 (852)
++.++| +||+.+++++... ....+++++|++. +|.++|.. ....+++.++..+++||+.||.||| +.||
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH-~~gI 101 (793)
T PLN00181 26 SKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDN---PDRSVDAFECFHVFRQIVEIVNAAH-SQGI 101 (793)
T ss_pred cchhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhc---ccccccHHHHHHHHHHHHHHHHHHH-hCCe
Confidence 345666 5788888877221 0146888899988 89999842 2356899999999999999999999 9999
Q ss_pred eecccCCCCEEEccCCcEEEcccchhhccccccC------------------------------CCC-cccccccCCCcc
Q psy3914 184 RHNHVNHTSIFINSCGEWKLGGLEYMEKISEASC------------------------------IPM-KRYSRYEDQSTY 232 (852)
Q Consensus 184 vH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~------------------------------~~~-~~~~~~~gt~~Y 232 (852)
+||||||+||||+..|.+|++|||.+........ .+. .......||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 9999999999997766666665555432111000 000 000113578899
Q ss_pred cCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-c---------CcCCCChhHHHHHHHhccCCCCCCCCHHH
Q psy3914 233 QIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-S---------NIDNIPENLKRVYLELISERPNQRPNPAD 302 (852)
Q Consensus 233 ~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-~---------~~~~ip~~L~~li~~lL~~nP~~Rps~~e 302 (852)
+|||++.+..++.++|||||||++|||++|..|+...... . ....-......++.+||..+|.+||++.+
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~e 261 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSE 261 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhhCcChHH
Confidence 9999998888999999999999999999998887432110 0 00111334568888999999999999999
Q ss_pred HHHhhcCCCCCCcc
Q psy3914 303 FIMRNRKPGGYFKN 316 (852)
Q Consensus 303 lL~~l~~~~~fF~n 316 (852)
+++| +||..
T Consensus 262 il~h-----~~~~~ 270 (793)
T PLN00181 262 LLQS-----EFINE 270 (793)
T ss_pred Hhhc-----hhhhh
Confidence 9997 88865
|
|
| >KOG1024|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-21 Score=207.72 Aligned_cols=238 Identities=15% Similarity=0.140 Sum_probs=184.2
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCC-----eEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN-----EKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g-----~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
+++...+. +|.||.||.|..++.. +.|-+|.+.. +-+...+..|--+|..+.|||++.+.++..
T Consensus 286 v~l~~llq--------EGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 286 VRLSCLLQ--------EGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred eechhhhh--------cCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 45555555 8999999999765432 3444555443 334556778888888999999999999866
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhh----hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcE
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTL----KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEW 201 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~----~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~ 201 (852)
++ ....++++.+.. +|..+|.... +....++..++..+..|++.|+.||| ..++||.||-..|.+|++.-.+
T Consensus 358 e~-~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh-~~~ViHkDiAaRNCvIdd~LqV 435 (563)
T KOG1024|consen 358 ED-YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH-NHGVIHKDIAARNCVIDDQLQV 435 (563)
T ss_pred ec-cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH-hcCcccchhhhhcceehhheeE
Confidence 54 255666677766 7999986322 12235677888899999999999999 9999999999999999999999
Q ss_pred EEcccchhhccccccCCCCc-ccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCC----------
Q psy3914 202 KLGGLEYMEKISEASCIPMK-RYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNR---------- 269 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~-~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~---------- 269 (852)
||+|=.+++.+-. ..+. ..........||+||.+.+..|+.++|+||||+++|||++ |+.|+..-
T Consensus 436 kltDsaLSRDLFP---~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylk 512 (563)
T KOG1024|consen 436 KLTDSALSRDLFP---GDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLK 512 (563)
T ss_pred EeccchhccccCc---ccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHh
Confidence 9999988873210 1111 1112233458999999999999999999999999999998 78887432
Q ss_pred --ccccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 270 --KSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 270 --~~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
..+.++-++|++|..++..||...|+.||+++++..-
T Consensus 513 dGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~c 551 (563)
T KOG1024|consen 513 DGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVIC 551 (563)
T ss_pred ccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHH
Confidence 3456788999999999999999999999999998753
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-20 Score=188.74 Aligned_cols=144 Identities=17% Similarity=0.191 Sum_probs=116.5
Q ss_pred cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcc
Q psy3914 143 PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKR 222 (852)
Q Consensus 143 ~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~ 222 (852)
+|.+++... ...+++..+..+++||+.||.||| +.+ ||+||+++.++.+|+ ||++......
T Consensus 2 sL~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~lH-~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~------- 62 (176)
T smart00750 2 SLADILEVR---GRPLNEEEIWAVCLQCLRALRELH-RQA------KSGNILLTWDGLLKL--DGSVAFKTPE------- 62 (176)
T ss_pred cHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHH-hcC------CcccEeEcCccceee--ccceEeeccc-------
Confidence 467777422 356999999999999999999999 555 999999999999999 9987643221
Q ss_pred cccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC-------------------cCCCCh--h
Q psy3914 223 YSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN-------------------IDNIPE--N 281 (852)
Q Consensus 223 ~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~-------------------~~~ip~--~ 281 (852)
...|++.|+|||++.+..++.++|||||||++|||++|..||........ ...++. .
T Consensus 63 --~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (176)
T smart00750 63 --QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARS 140 (176)
T ss_pred --cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhh
Confidence 12577899999999888889999999999999999999999854322210 112223 5
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 282 LKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 282 L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+.+++.+||..+|..||++.++++|+
T Consensus 141 ~~~~i~~cl~~~p~~Rp~~~~ll~~~ 166 (176)
T smart00750 141 FADFMRVCASRLPQRREAANHYLAHC 166 (176)
T ss_pred HHHHHHHHHhcccccccCHHHHHHHH
Confidence 89999999999999999999999984
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1164|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-18 Score=192.00 Aligned_cols=238 Identities=13% Similarity=0.095 Sum_probs=184.5
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCC-eEEEEEEEeCC--CchHHHHHHHHHHHhCCC----CCcceEeeeE-
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN-EKVTIFLNDSA--DTYEPALSYVKKLKTLRH----PSILTFLDSV- 126 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g-~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrH----PnIlk~~d~~- 126 (852)
.|.+++.|| .|+||.||.+.+..++ ..+++|+.... .....+..|..+++.+.+ +++..+++..
T Consensus 19 ~~~i~~~iG--------~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~ 90 (322)
T KOG1164|consen 19 RYKLGKKIG--------EGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR 90 (322)
T ss_pred ceEEeeecc--------ccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc
Confidence 799999999 9999999999998775 67888877762 222278889999998873 6899999998
Q ss_pred EcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC-----Cc
Q psy3914 127 ESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC-----GE 200 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~-----g~ 200 (852)
..+ .+.||||+.+. +|.++.... . .+.++..++..+..|++.+|.+|| +.|++||||||+|+.+... ..
T Consensus 91 ~~~--~~~~iVM~l~G~sL~dl~~~~-~-~~~fs~~T~l~ia~q~l~~l~~lH-~~G~iHRDiKp~N~~~g~~~~~~~~~ 165 (322)
T KOG1164|consen 91 STE--DFNFIVMSLLGPSLEDLRKRN-P-PGRFSRKTVLRIAIQNLNALEDLH-SKGFIHRDIKPENFVVGQSSRSEVRT 165 (322)
T ss_pred CCC--ceeEEEEeccCccHHHHHHhC-C-CCCcCHhHHHHHHHHHHHHHHHHH-hcCcccCCcCHHHeeecCCCCcccce
Confidence 455 78999999999 799876332 2 578999999999999999999999 9999999999999999865 35
Q ss_pred EEEcccchhh--ccccccC---CCCcc-cccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC
Q psy3914 201 WKLGGLEYME--KISEASC---IPMKR-YSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN 274 (852)
Q Consensus 201 ~KL~DFg~a~--~~~~~~~---~~~~~-~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~ 274 (852)
+.|.|||+++ .+..... .+... .....||.+|+++.+..+...+...|+||++.++.+++.|.+||.+......
T Consensus 166 ~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~ 245 (322)
T KOG1164|consen 166 LYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL 245 (322)
T ss_pred EEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch
Confidence 9999999998 4322221 11212 2346699999999999888899999999999999999999999954322110
Q ss_pred ----------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHH
Q psy3914 275 ----------------IDNIPENLKRVYLELISERPNQRPNPADFIM 305 (852)
Q Consensus 275 ----------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~ 305 (852)
....|..+..+...+-..+...+|....+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~ 292 (322)
T KOG1164|consen 246 KSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE 292 (322)
T ss_pred HHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence 1123455555555555566666666665544
|
|
| >KOG1165|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=6e-19 Score=185.71 Aligned_cols=204 Identities=14% Similarity=0.135 Sum_probs=179.8
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCC-CCCcceEeeeEEcCC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLR-HPSILTFLDSVESPS 130 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~~ 130 (852)
-+..|.||++|| .|+||.+|.|++.-+|++||||.-........++.|++..+.|. .++|..++-+....
T Consensus 26 VG~hyrVGkKIG--------eGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG- 96 (449)
T KOG1165|consen 26 VGPHYRVGKKIG--------EGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEG- 96 (449)
T ss_pred ecccceeccccc--------cCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeecccc-
Confidence 456799999999 99999999999999999999998777777889999999999996 69999999888776
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC-----cEEEc
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG-----EWKLG 204 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g-----~~KL~ 204 (852)
.+-.+|+|.+. +|.+++.-+ ...++...++.+..|++.-+.++| ..++|.|||||+|+||..-| .+.|+
T Consensus 97 -~~NiLVidLLGPSLEDLFD~C---gR~FSvKTV~miA~Qmi~rie~vH-~k~LIYRDIKPdNFLIGrp~~k~~n~Ihii 171 (449)
T KOG1165|consen 97 -KYNILVIDLLGPSLEDLFDLC---GRRFSVKTVAMIAKQMITRIEYVH-EKDLIYRDIKPDNFLIGRPGTKDANVIHII 171 (449)
T ss_pred -chhhhhhhhhCcCHHHHHHHh---cCcccHHhHHHHHHHHHHHHHHHH-hcceeecccCccceeecCCCCCCCceEEEE
Confidence 78889999999 688887432 267899999999999999999999 99999999999999997543 48999
Q ss_pred ccchhhcccc---ccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCC
Q psy3914 205 GLEYMEKISE---ASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNR 269 (852)
Q Consensus 205 DFg~a~~~~~---~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~ 269 (852)
|||++..+.+ ...+|+....++.||.+||+-....+..-+...|+=+||-++++.+-|.+||.|-
T Consensus 172 DFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 172 DFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred eccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence 9999997665 3456777777899999999998888888899999999999999999999999763
|
|
| >KOG0590|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-20 Score=221.51 Aligned_cols=233 Identities=14% Similarity=0.154 Sum_probs=179.7
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEe----C-C---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc-
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLND----S-A---DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE- 142 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~----~-~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~- 142 (852)
.|.+|.|+........+.+..+.+. . . .....+..|+-+-.+|+||||+..++.+.+. ...+-+||||.
T Consensus 328 ~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~--~~~~~~mE~~~~ 405 (601)
T KOG0590|consen 328 SGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI--DGILQSMEYCPY 405 (601)
T ss_pred ecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc--ccchhhhhcccH
Confidence 7788888888888777766666553 2 1 1111255666677788999998888877765 44555599999
Q ss_pred cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcc
Q psy3914 143 PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKR 222 (852)
Q Consensus 143 ~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~ 222 (852)
+|+..+. ..+.+...++..++.|++.||+||| +.|+.|||||++|++++..|.+||+|||.+..+.-........
T Consensus 406 Dlf~~~~----~~~~~~~~e~~c~fKqL~~Gv~y~h-~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~ 480 (601)
T KOG0590|consen 406 DLFSLVM----SNGKLTPLEADCFFKQLLRGVKYLH-SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHE 480 (601)
T ss_pred HHHHHHh----cccccchhhhhHHHHHHHHHHHHHH-hcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhh
Confidence 5777773 2357889999999999999999999 9999999999999999999999999999987433222211223
Q ss_pred cccccCCCcccCCccccCCCC-CcchhHHhHHHHHHHHHhCCCCCCCCccc--------------------cCcCCCChh
Q psy3914 223 YSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------------SNIDNIPEN 281 (852)
Q Consensus 223 ~~~~~gt~~Y~APE~~~~~~~-~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------------~~~~~ip~~ 281 (852)
....+|+..|+|||++.+..| ....||||.|++++.|.+|++||.-...- ..+..+|..
T Consensus 481 ~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ 560 (601)
T KOG0590|consen 481 SSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRE 560 (601)
T ss_pred hcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhh
Confidence 345788999999999955444 45799999999999999999998422111 012467888
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 282 LKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 282 L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.+.+|.+||+.+|.+|.+++++++. +||+.
T Consensus 561 ~~~~~~~~l~~~P~~R~ti~~i~~d-----~W~~~ 590 (601)
T KOG0590|consen 561 TRIIIYRMLQLDPTKRITIEQILND-----EWIRS 590 (601)
T ss_pred HHHHHHHHccCChhheecHHHHhhC-----hHhhh
Confidence 9999999999999999999999985 78864
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.3e-19 Score=195.15 Aligned_cols=162 Identities=14% Similarity=0.107 Sum_probs=124.5
Q ss_pred CCCCCeeEeccccCCCCCCcccCCceEEEEEEEcC-CCeEEEEEEEeCC-------CchHHHHHHHHHHHhCCCCCcce-
Q psy3914 51 SKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-SNEKVTIFLNDSA-------DTYEPALSYVKKLKTLRHPSILT- 121 (852)
Q Consensus 51 ~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-~g~~VaVKv~~~~-------~~~~~~~~E~~~Lk~LrHPnIlk- 121 (852)
.....|++++.|| .|+||+||+|.++. +++.|+||++... .....+.+|+++|+.|+|+||+.
T Consensus 15 ~~~~~Y~~~~~IG--------~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~ 86 (365)
T PRK09188 15 ALSARFVETAVLK--------RDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQ 86 (365)
T ss_pred cccCCceEccEEe--------ecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcE
Confidence 3456799999999 99999999998876 6788899986532 12456899999999999999985
Q ss_pred EeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceeccc-CCCCEEEccC
Q psy3914 122 FLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHV-NHTSIFINSC 198 (852)
Q Consensus 122 ~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DI-kp~NIlV~~~ 198 (852)
+++ . ...||||||+. +|.. + . ... ...++.|++++|.||| +.||+|||| ||+||+++.+
T Consensus 87 l~~----~--~~~~LVmE~~~G~~L~~-~-~------~~~---~~~~~~~i~~aL~~lH-~~gIiHrDL~KP~NILv~~~ 148 (365)
T PRK09188 87 LLA----T--GKDGLVRGWTEGVPLHL-A-R------PHG---DPAWFRSAHRALRDLH-RAGITHNDLAKPQNWLMGPD 148 (365)
T ss_pred EEE----c--CCcEEEEEccCCCCHHH-h-C------ccc---hHHHHHHHHHHHHHHH-HCCCeeCCCCCcceEEEcCC
Confidence 443 1 34799999998 5652 2 1 111 1356789999999999 899999999 9999999999
Q ss_pred CcEEEcccchhhccccccCCCC----cccccccCCCcccCCccc
Q psy3914 199 GEWKLGGLEYMEKISEASCIPM----KRYSRYEDQSTYQIPENS 238 (852)
Q Consensus 199 g~~KL~DFg~a~~~~~~~~~~~----~~~~~~~gt~~Y~APE~~ 238 (852)
|.+||+|||+++.+........ .......+++.|++||.+
T Consensus 149 ~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~ 192 (365)
T PRK09188 149 GEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDAL 192 (365)
T ss_pred CCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccC
Confidence 9999999999986544221111 111245678899999997
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.1e-18 Score=179.48 Aligned_cols=236 Identities=19% Similarity=0.275 Sum_probs=186.2
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CC--chHHHHHHHHHHHhCCCC-CcceEeeeEEcC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---AD--TYEPALSYVKKLKTLRHP-SILTFLDSVESP 129 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~--~~~~~~~E~~~Lk~LrHP-nIlk~~d~~e~~ 129 (852)
|.+.+.+| .|+++.||.+.+. ..+++|.+.. .. ....+.+|+..+..+.|+ +|+++++.+...
T Consensus 2 ~~~~~~l~--------~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~ 70 (384)
T COG0515 2 YRILRKLG--------EGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDE 70 (384)
T ss_pred ceeEEeec--------CCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecC
Confidence 78888898 8889999999997 7889998887 22 366789999999999988 799999999766
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC-cEEEccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG-EWKLGGL 206 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g-~~KL~DF 206 (852)
...+++++++. .|..++...... ..+....+..++.|++.+|.|+| ..+++||||||+||+++..+ ..+++||
T Consensus 71 --~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H-~~~~~hrd~kp~nil~~~~~~~~~l~df 146 (384)
T COG0515 71 --GSLYLVMEYVDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLH-SKGIIHRDIKPENILLDRDGRVVKLIDF 146 (384)
T ss_pred --CEEEEEEecCCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHH-hCCeeccCCCHHHeeecCCCCeEEEecc
Confidence 67899999999 566555321111 36889999999999999999999 89999999999999999988 7999999
Q ss_pred chhhccccccCCCC--cccccccCCCcccCCccccC---CCCCcchhHHhHHHHHHHHHhCCCCCCCCcc---cc-----
Q psy3914 207 EYMEKISEASCIPM--KRYSRYEDQSTYQIPENSLS---HVTKCSTDMYGLGILIWEVFNGPLQSTNRKS---LS----- 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~--~~~~~~~gt~~Y~APE~~~~---~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~---l~----- 273 (852)
|.+........... .......++..|++||.+.+ ..+....|+|++|++++++++|..||..... ..
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 226 (384)
T COG0515 147 GLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKI 226 (384)
T ss_pred CcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHH
Confidence 99874432211111 12345778999999999965 6788899999999999999999988754432 00
Q ss_pred --------CcCCCC--------hhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 274 --------NIDNIP--------ENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 274 --------~~~~ip--------~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
....+. ..+.+++.+++..+|..|.+......+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 227 ILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 001111 367889999999999999988776653
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-18 Score=185.48 Aligned_cols=226 Identities=17% Similarity=0.168 Sum_probs=147.0
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCC----------CCCcc
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLR----------HPSIL 120 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~Lr----------HPnIl 120 (852)
+..++.|| .|+++.||.+++..+|+.++||++-. ....+.+++|.-....+. |-.++
T Consensus 14 l~~~~~i~--------~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l 85 (288)
T PF14531_consen 14 LVRGRIIG--------KGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFL 85 (288)
T ss_dssp EEEEEEEE--------EETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B-
T ss_pred EEEccccc--------cCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEE
Confidence 56688899 89999999999999999999999876 334455555554333322 22344
Q ss_pred eEeeeEEcC---------CC-C-----eEEEEEeecc-cHHHHHHhhhhcCCC---CCHHHHHHHHHHHHHHHHHHHhcC
Q psy3914 121 TFLDSVESP---------SK-S-----LVYLAVEYVE-PIFYHLDNTLKENNE---KKQIYISWGIFQITRALSFLINDA 181 (852)
Q Consensus 121 k~~d~~e~~---------~~-~-----~~yIVtE~v~-~L~~~L~~~~~~~~~---l~e~~i~~~l~QI~~aL~fLH~~~ 181 (852)
..+|..... .+ + +.+++|+.+. +|..++.-....... +.......+..|+++.+++|| ..
T Consensus 86 ~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh-~~ 164 (288)
T PF14531_consen 86 VPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH-SY 164 (288)
T ss_dssp --SEEEEETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH-HT
T ss_pred eeeEEEEEcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh-hc
Confidence 444433321 00 1 2367777777 787776422221111 122223445589999999999 99
Q ss_pred CceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCcccc--------CCCCCcchhHHhHH
Q psy3914 182 DLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL--------SHVTKCSTDMYGLG 253 (852)
Q Consensus 182 ~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~--------~~~~~~~sDIwSLG 253 (852)
|++|+||+|+|+|++.+|.+.|+||+.+...+..... ...+..|.|||... ...++.+.|.|+||
T Consensus 165 GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-------~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG 237 (288)
T PF14531_consen 165 GLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-------SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLG 237 (288)
T ss_dssp TEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-------GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHH
T ss_pred ceEecccceeeEEEcCCCCEEEcChHHHeecCceeec-------cCCCcccCChhhhhhhcccCcccceeeeccCHHHHH
Confidence 9999999999999999999999999988755432111 12235799999862 23578899999999
Q ss_pred HHHHHHHhCCCCCCCC-------ccccCcCCCChhHHHHHHHhccCCCCCC
Q psy3914 254 ILIWEVFNGPLQSTNR-------KSLSNIDNIPENLKRVYLELISERPNQR 297 (852)
Q Consensus 254 ~ll~el~tG~~pf~~~-------~~l~~~~~ip~~L~~li~~lL~~nP~~R 297 (852)
++||.|++|..||... .......++|..++.+|+.||+.||.+|
T Consensus 238 ~~ly~lWC~~lPf~~~~~~~~~~~~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 238 ITLYSLWCGRLPFGLSSPEADPEWDFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHHSS-STCCCGGGSTSGGGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHHHccCCCCCCCccccccccchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9999999999999532 1345556899999999999999999987
|
|
| >KOG1163|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-18 Score=174.38 Aligned_cols=203 Identities=13% Similarity=0.090 Sum_probs=173.5
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCC-CCcceEeeeEEcCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRH-PSILTFLDSVESPSK 131 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrH-PnIlk~~d~~e~~~~ 131 (852)
..+|.+.++|| +|+||.+|.|....+|+.||||+-........+..|.++.+.|+| ++|..+..+..+.
T Consensus 14 ~gky~lvrkiG--------sGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~-- 83 (341)
T KOG1163|consen 14 GGKYKLVRKIG--------SGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEK-- 83 (341)
T ss_pred ccceEEEEeec--------CCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhcccc--
Confidence 45799999999 999999999999999999999998876667788889999999985 7788888888766
Q ss_pred CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC---CcEEEcccc
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC---GEWKLGGLE 207 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~---g~~KL~DFg 207 (852)
.+-.+||+... +|.+++. .. ...++..++.-..-|++.-+.|+| ..++|||||||+|+++.-+ ..+.|+|||
T Consensus 84 ~ynvlVMdLLGPsLEdLfn-fC--~R~ftmkTvLMLaDQml~RiEyvH-~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFG 159 (341)
T KOG1163|consen 84 DYNVLVMDLLGPSLEDLFN-FC--SRRFTMKTVLMLADQMLSRIEYVH-LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFG 159 (341)
T ss_pred ccceeeeeccCccHHHHHH-HH--hhhhhHHhHHHHHHHHHHHHHHHH-hhccccccCCccceeeccccccceEEEEecc
Confidence 88999999999 5777773 22 256777888989999999999999 8999999999999998643 458999999
Q ss_pred hhhcccc---ccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCC
Q psy3914 208 YMEKISE---ASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNR 269 (852)
Q Consensus 208 ~a~~~~~---~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~ 269 (852)
++..+-+ ...+|+.....+.||.+|.+--...+...+...|+=|+|.++.++--|.+||.|-
T Consensus 160 LaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQgl 224 (341)
T KOG1163|consen 160 LAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGL 224 (341)
T ss_pred chhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccccc
Confidence 9987654 4456777777789999999988877777788999999999999999999999653
|
|
| >KOG4158|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.5e-18 Score=182.44 Aligned_cols=182 Identities=14% Similarity=0.224 Sum_probs=138.9
Q ss_pred CCCCcceEeeeEEcC-------------------------CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHH
Q psy3914 115 RHPSILTFLDSVESP-------------------------SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIF 168 (852)
Q Consensus 115 rHPnIlk~~d~~e~~-------------------------~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~ 168 (852)
+||||+.++..|.++ ....+|+||..+. +|..+|-. ...+.....-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~-----~~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWT-----RHRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhc-----CCCchHHHHHHHH
Confidence 699999999887654 1357999999999 89999832 3456667788999
Q ss_pred HHHHHHHHHHhcCCceecccCCCCEEEccC--C--cEEEcccchhhcccccc--CCCCc-ccccccCCCcccCCccccCC
Q psy3914 169 QITRALSFLINDADLRHNHVNHTSIFINSC--G--EWKLGGLEYMEKISEAS--CIPMK-RYSRYEDQSTYQIPENSLSH 241 (852)
Q Consensus 169 QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~--g--~~KL~DFg~a~~~~~~~--~~~~~-~~~~~~gt~~Y~APE~~~~~ 241 (852)
|+++|+.||| .+|+.|||+|.+||+|.-+ + .+.|+|||++-. ++.. ..|+. ......|....||||+....
T Consensus 349 QlLEav~hL~-~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLA-d~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 349 QLLEAVTHLH-KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLA-DDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHHH-HccchhhcccccceEEEecCCCCcEEEEcccceeee-ccccccccccccccccCCCcceecchhhhhcC
Confidence 9999999999 9999999999999999543 3 378999999742 2221 12221 22235577789999996211
Q ss_pred ------CCCcchhHHhHHHHHHHHHhCCCCCCCCccc-------------cCcCCCChhHHHHHHHhccCCCCCCCCHHH
Q psy3914 242 ------VTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------------SNIDNIPENLKRVYLELISERPNQRPNPAD 302 (852)
Q Consensus 242 ------~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~e 302 (852)
..-.++|.|+.|.+.||+|....||++.... ..+..+|+.+++++..+|+.||++|+++.-
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~i 506 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNI 506 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccH
Confidence 1124799999999999999999999763221 124688999999999999999999998754
Q ss_pred H
Q psy3914 303 F 303 (852)
Q Consensus 303 l 303 (852)
.
T Consensus 507 A 507 (598)
T KOG4158|consen 507 A 507 (598)
T ss_pred H
Confidence 3
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-16 Score=163.53 Aligned_cols=130 Identities=12% Similarity=0.032 Sum_probs=102.2
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCC----c------------------------hHHHHHHHHHHHhCCCCCcceEe
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSAD----T------------------------YEPALSYVKKLKTLRHPSILTFL 123 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~----~------------------------~~~~~~E~~~Lk~LrHPnIlk~~ 123 (852)
.|+++.||.|.+. +|+.|+||+++... . .....+|++.|..+.|++|....
T Consensus 7 ~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~~p~ 85 (190)
T cd05147 7 TGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIPCPE 85 (190)
T ss_pred cccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCc
Confidence 8999999999997 89999999997621 1 12334599999999988875443
Q ss_pred eeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHH-HhcCCceecccCCCCEEEccCCc
Q psy3914 124 DSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFL-INDADLRHNHVNHTSIFINSCGE 200 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fL-H~~~~ivH~DIkp~NIlV~~~g~ 200 (852)
..... . .||||||+. .|...+ .....++...+..++.||+.+|.+| | ..|++||||||+||+++ ++.
T Consensus 86 ~~~~~---~-~~iVmE~i~g~~l~~~~----~~~~~~~~~~~~~i~~qi~~~L~~l~H-~~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 86 PILLK---S-HVLVMEFIGDDGWAAPR----LKDAPLSESKARELYLQVIQIMRILYQ-DCRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred EEEec---C-CEEEEEEeCCCCCcchh----hhcCCCCHHHHHHHHHHHHHHHHHHHH-hCCcccCCCCHHHEEEE-CCc
Confidence 33222 2 489999998 333322 1235788899999999999999999 7 88999999999999998 588
Q ss_pred EEEcccchhhcc
Q psy3914 201 WKLGGLEYMEKI 212 (852)
Q Consensus 201 ~KL~DFg~a~~~ 212 (852)
++|+|||++...
T Consensus 156 v~LiDFG~a~~~ 167 (190)
T cd05147 156 LYIIDVSQSVEH 167 (190)
T ss_pred EEEEEccccccC
Confidence 999999998743
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.9e-17 Score=167.77 Aligned_cols=168 Identities=9% Similarity=0.012 Sum_probs=126.5
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----Cch------HHHHHHHHHHHhCCCCCcce
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTY------EPALSYVKKLKTLRHPSILT 121 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~------~~~~~E~~~Lk~LrHPnIlk 121 (852)
+.+|.+.+.++ .|+++.||.+.. ++..|+||++... ... +.+.+|++.+.+++||+|..
T Consensus 30 ~~~y~~~~~l~--------~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~ 99 (232)
T PRK10359 30 SYNIKTIKVFR--------NIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLAS 99 (232)
T ss_pred hCceEEEEEec--------CCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCc
Confidence 35699999999 899999999655 4678999999751 111 12689999999999999999
Q ss_pred EeeeEEcCC------CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCE
Q psy3914 122 FLDSVESPS------KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSI 193 (852)
Q Consensus 122 ~~d~~e~~~------~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NI 193 (852)
+.+++.... .+..||||||++ +|.++. .+++. .+.+|+.+|..|| ..|++||||+|+||
T Consensus 100 ~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~--------~~~~~----~~~~i~~~l~~lH-~~gi~H~Dikp~Ni 166 (232)
T PRK10359 100 LNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP--------EISED----VKAKIKASIESLH-QHGMVSGDPHKGNF 166 (232)
T ss_pred ceEeeeecccccccccCCeEEEEEEECCccHHHhh--------hccHH----HHHHHHHHHHHHH-HcCCccCCCChHHE
Confidence 999866431 135899999999 676653 12222 3569999999999 99999999999999
Q ss_pred EEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHH
Q psy3914 194 FINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVF 260 (852)
Q Consensus 194 lV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~ 260 (852)
+++++| ++|+|||......+.... ...+....+..++|+|+||+.+..+.
T Consensus 167 li~~~g-i~liDfg~~~~~~e~~a~----------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 167 IVSKNG-LRIIDLSGKRCTAQRKAK----------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEeCCC-EEEEECCCcccccchhhH----------------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999 999999997643221110 01223344557899999999876553
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.67 E-value=6e-16 Score=158.26 Aligned_cols=129 Identities=12% Similarity=0.055 Sum_probs=104.0
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCCc----------------------------hHHHHHHHHHHHhCCCCCcceEe
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSADT----------------------------YEPALSYVKKLKTLRHPSILTFL 123 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~----------------------------~~~~~~E~~~Lk~LrHPnIlk~~ 123 (852)
.|+++.||+|++. +|+.|+||+++.... ....++|++.+.+++|++|....
T Consensus 7 ~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~ 85 (190)
T cd05145 7 TGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPVPE 85 (190)
T ss_pred cCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCCCce
Confidence 8999999999987 899999999986210 12346889999999999986554
Q ss_pred eeEEcCCCCeEEEEEeecc-c-HH-HHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-CCceecccCCCCEEEccCC
Q psy3914 124 DSVESPSKSLVYLAVEYVE-P-IF-YHLDNTLKENNEKKQIYISWGIFQITRALSFLIND-ADLRHNHVNHTSIFINSCG 199 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~-~-L~-~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~-~~ivH~DIkp~NIlV~~~g 199 (852)
.+.... .||||||+. . +. ..+. ...++...+..++.|++.+|.+|| . .|++||||||+||+++ +|
T Consensus 86 ~~~~~~----~~lVmE~~~g~~~~~~~l~-----~~~~~~~~~~~i~~~l~~~l~~lH-~~~givHrDlkP~NIll~-~~ 154 (190)
T cd05145 86 PILLKK----NVLVMEFIGDDGSPAPRLK-----DVPLEEEEAEELYEQVVEQMRRLY-QEAGLVHGDLSEYNILYH-DG 154 (190)
T ss_pred EEEecC----CEEEEEEecCCCchhhhhh-----hccCCHHHHHHHHHHHHHHHHHHH-HhCCEecCCCChhhEEEE-CC
Confidence 444332 489999998 2 32 2231 246778889999999999999999 6 9999999999999998 89
Q ss_pred cEEEcccchhhcc
Q psy3914 200 EWKLGGLEYMEKI 212 (852)
Q Consensus 200 ~~KL~DFg~a~~~ 212 (852)
.++|+|||++...
T Consensus 155 ~~~liDFG~a~~~ 167 (190)
T cd05145 155 KPYIIDVSQAVEL 167 (190)
T ss_pred CEEEEEcccceec
Confidence 9999999998754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG0603|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.7e-17 Score=183.70 Aligned_cols=233 Identities=12% Similarity=0.189 Sum_probs=180.2
Q ss_pred cCCceEEEEEEE---cCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCC-CCCcceEeeeEEcCCCCeEEEEEeecc-
Q psy3914 72 KHTFWKFHGGKK---KGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLR-HPSILTFLDSVESPSKSLVYLAVEYVE- 142 (852)
Q Consensus 72 ~Gs~~~Vy~a~~---k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~~~~~~yIVtE~v~- 142 (852)
.|+++.|+.++. ...|..+++|+..+ .......+.|-.++...+ ||.++++.-.++.+ +.+|++.+++.
T Consensus 4 ~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~--~kl~l~ld~~rg 81 (612)
T KOG0603|consen 4 QGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTD--GKLYLILDFLRG 81 (612)
T ss_pred cCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccc--cchhHhhhhccc
Confidence 778888877644 34567888888776 122225566777888887 99999999999988 89999999998
Q ss_pred -cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCc
Q psy3914 143 -PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMK 221 (852)
Q Consensus 143 -~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~ 221 (852)
.|...+ .....+++...+.+...++-++.++| +.+++|+|+|++||+++.+|++++.|||..+..-+...
T Consensus 82 g~lft~l----~~~~~f~~~~~~~~~aelaLald~lh-~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~---- 152 (612)
T KOG0603|consen 82 GDLFTRL----SKEVMFDELDVAFYLAELALALDHLH-KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI---- 152 (612)
T ss_pred chhhhcc----ccCCchHHHHHHHHHHHHHHHHhhcc-hhHHHHhcccccceeecccCccccCCchhhhHhHhhhh----
Confidence 344444 34467788899999999999999999 99999999999999999999999999999875432111
Q ss_pred ccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCC-------ccccCcCCCChhHHHHHHHhccCCC
Q psy3914 222 RYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNR-------KSLSNIDNIPENLKRVYLELISERP 294 (852)
Q Consensus 222 ~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~-------~~l~~~~~ip~~L~~li~~lL~~nP 294 (852)
.+||..|||||++. ....++|.||||+++|+|++|..||.+. ..+..+..+....+.++..|+..+|
T Consensus 153 ----~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p 226 (612)
T KOG0603|consen 153 ----ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTMKRILKAELEMPRELSAEARSLFRQLFKRNP 226 (612)
T ss_pred ----cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHHHHHhhhccCCchhhhHHHHHHHHHHHhhCH
Confidence 17888999999997 4567899999999999999999999652 1223345566678899999999999
Q ss_pred CCCCCH--HHHHHhhcCCCCCCcchHHHHHH
Q psy3914 295 NQRPNP--ADFIMRNRKPGGYFKNDLIDALL 323 (852)
Q Consensus 295 ~~Rps~--~elL~~l~~~~~fF~n~lv~~l~ 323 (852)
..|.-. ..+.++. .++||.......+.
T Consensus 227 ~nrLg~~~~~~~eik--~h~f~~~i~~~~l~ 255 (612)
T KOG0603|consen 227 ENRLGAGPDGVDEIK--QHEFFQSIDWNELE 255 (612)
T ss_pred HHHhccCcchhHHHh--ccchheeeeHhhHh
Confidence 999744 2333322 24888876655443
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.8e-15 Score=152.73 Aligned_cols=184 Identities=13% Similarity=0.026 Sum_probs=133.3
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-Cc-----hHHHHHHHHHHHhCC-CCCcceEeeeEEc
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-DT-----YEPALSYVKKLKTLR-HPSILTFLDSVES 128 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-~~-----~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~ 128 (852)
+.+...++ .|+|++||.+.. .+.+|+.+.+... .. ...+++|+++|++|. |++|.+++++
T Consensus 4 ~~~~~~l~--------~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~--- 70 (218)
T PRK12274 4 PAVNEPLK--------SDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW--- 70 (218)
T ss_pred cccceeec--------CCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---
Confidence 44567777 899999997766 6788887777762 11 226889999999996 5889999885
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceeccc-CCCCEEEccCCcEEEcc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHV-NHTSIFINSCGEWKLGG 205 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DI-kp~NIlV~~~g~~KL~D 205 (852)
...|++|||+. +|...+. . ....++.|++.+|.++| ..|++|||| ||+||+++.+|.++|+|
T Consensus 71 ---~~~~lvmeyI~G~~L~~~~~----------~-~~~~~~~qi~~~L~~lH-~~GIvHrDL~kp~NILv~~~g~i~LID 135 (218)
T PRK12274 71 ---DGRHLDRSYLAGAAMYQRPP----------R-GDLAYFRAARRLLQQLH-RCGVAHNDLAKEANWLVQEDGSPAVID 135 (218)
T ss_pred ---cCEEEEEeeecCccHHhhhh----------h-hhHHHHHHHHHHHHHHH-HCcCccCCCCCcceEEEcCCCCEEEEE
Confidence 23799999988 5654331 0 11346789999999999 999999999 79999999999999999
Q ss_pred cchhhccccccCC----CCcc-----cccccCCCcccCCccc--cCCCCCcchhHHhHHHHHHHHHhCCCCCC
Q psy3914 206 LEYMEKISEASCI----PMKR-----YSRYEDQSTYQIPENS--LSHVTKCSTDMYGLGILIWEVFNGPLQST 267 (852)
Q Consensus 206 Fg~a~~~~~~~~~----~~~~-----~~~~~gt~~Y~APE~~--~~~~~~~~sDIwSLG~ll~el~tG~~pf~ 267 (852)
||++......... .... -.....++.|..|+.. .....-...+.++.|+-+|.++|+..++.
T Consensus 136 FG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 136 FQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred CCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 9998743321110 0000 0012246677888764 32333356889999999999999988874
|
|
| >KOG0195|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.6e-16 Score=157.84 Aligned_cols=219 Identities=14% Similarity=0.210 Sum_probs=164.6
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIF 145 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~ 145 (852)
....|.+|+|+.. |..+.+|++.. ......+..|+-.|+.+.||||+.+++.+... .++.+++.|++ +|+
T Consensus 200 e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp--pnlv~isq~mp~gsly 275 (448)
T KOG0195|consen 200 ESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP--PNLVIISQYMPFGSLY 275 (448)
T ss_pred cCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC--CCceEeeeeccchHHH
Confidence 4566788999885 44566777766 33445678888999999999999999999987 88999999999 799
Q ss_pred HHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceec-ccCCCCEEEccCCcEEE--cccchhhccccccCCCCcc
Q psy3914 146 YHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHN-HVNHTSIFINSCGEWKL--GGLEYMEKISEASCIPMKR 222 (852)
Q Consensus 146 ~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~-DIkp~NIlV~~~g~~KL--~DFg~a~~~~~~~~~~~~~ 222 (852)
++|... ..-..+..++..+...|++|++|||+--.++-+ -|+...|+|+++-..+| +|--|+. .
T Consensus 276 nvlhe~--t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsf--q--------- 342 (448)
T KOG0195|consen 276 NVLHEQ--TSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSF--Q--------- 342 (448)
T ss_pred HHHhcC--ccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeee--e---------
Confidence 999532 223456678889999999999999943444433 57888999998766544 3433321 0
Q ss_pred cccccCCCcccCCccccCCC---CCcchhHHhHHHHHHHHHhCCCCCCCCccc-------------cCcCCCChhHHHHH
Q psy3914 223 YSRYEDQSTYQIPENSLSHV---TKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------------SNIDNIPENLKRVY 286 (852)
Q Consensus 223 ~~~~~gt~~Y~APE~~~~~~---~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------------~~~~~ip~~L~~li 286 (852)
.....-.+.|++||.+.... .-.++|+|||++++||+-|...||..-+.+ ..+..|+..+..++
T Consensus 343 e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm 422 (448)
T KOG0195|consen 343 EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLM 422 (448)
T ss_pred ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHH
Confidence 01122345899999984333 235799999999999999999999654332 23567778899999
Q ss_pred HHhccCCCCCCCCHHHHHHhh
Q psy3914 287 LELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 287 ~~lL~~nP~~Rps~~elL~~l 307 (852)
.-|++.||.+||.++.++-.+
T Consensus 423 ~icmnedpgkrpkfdmivpil 443 (448)
T KOG0195|consen 423 NICMNEDPGKRPKFDMIVPIL 443 (448)
T ss_pred HHHhcCCCCcCCCcceehhhH
Confidence 999999999999999887543
|
|
| >KOG0606|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.6e-15 Score=179.89 Aligned_cols=217 Identities=14% Similarity=0.165 Sum_probs=153.1
Q ss_pred CCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 49 DASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 49 ~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.......|+.++.|. .|.|+.||..+++.+.+++++ .++++. -.++| +|..-..|.++
T Consensus 78 ~~p~e~df~~Iklis--------ngAygavylvrh~~trqrfa~-kiNkq~--lilRn---ilt~a~npfvv-------- 135 (1205)
T KOG0606|consen 78 RAPSESDFNTIKLIS--------NGAYGAVYLVRHKETRQRFAM-KINKQN--LILRN---ILTFAGNPFVV-------- 135 (1205)
T ss_pred cCCCccccceeEeec--------cCCCCceeeeeccccccchhh-cccccc--hhhhc---cccccCCccee--------
Confidence 334456789999998 899999999999999999999 455422 12222 22222233322
Q ss_pred CCCCeEEEEEeecccHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 129 PSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 129 ~~~~~~yIVtE~v~~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
.+-...+ +.-+.++.. ++.+++||| ..+|+|||+||+|++|+.-|.+||.|||+
T Consensus 136 -------------gDc~tll----k~~g~lPvd--------mvla~Eylh-~ygivhrdlkpdnllIT~mGhiKlTDfgL 189 (1205)
T KOG0606|consen 136 -------------GDCATLL----KNIGPLPVD--------MVLAVEYLH-SYGIVHRDLKPDNLLITSMGHIKLTDFGL 189 (1205)
T ss_pred -------------chhhhhc----ccCCCCcch--------hhHHhHhhc-cCCeecCCCCCCcceeeecccccccchhh
Confidence 1112222 111344432 278999999 99999999999999999999999999999
Q ss_pred hhccccccCC-----------CCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----
Q psy3914 209 MEKISEASCI-----------PMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----- 272 (852)
Q Consensus 209 a~~~~~~~~~-----------~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----- 272 (852)
+......... ........+||+.|+|||++....|+..+|.|++|+|+||.+.|..||.+...-
T Consensus 190 sk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~ 269 (1205)
T KOG0606|consen 190 SKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQ 269 (1205)
T ss_pred hhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhh
Confidence 7632111000 001112357999999999998889999999999999999999999999765221
Q ss_pred ---------cCcCCCChhHHHHHHHhccCCCCCCC-CHHHHHHhhcCCCCCCcc
Q psy3914 273 ---------SNIDNIPENLKRVYLELISERPNQRP-NPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 ---------~~~~~ip~~L~~li~~lL~~nP~~Rp-s~~elL~~l~~~~~fF~n 316 (852)
+.-..+|++.++++.+||..||..|. +..++.-.+ ++||..
T Consensus 270 visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~---h~ff~~ 320 (1205)
T KOG0606|consen 270 VISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQ---HGFFQL 320 (1205)
T ss_pred hhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhh---ccceee
Confidence 12357899999999999999999996 333333222 378864
|
|
| >KOG1166|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.4e-14 Score=175.32 Aligned_cols=236 Identities=11% Similarity=0.136 Sum_probs=170.1
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCC---CCCcceEeeeEEc
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLR---HPSILTFLDSVES 128 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~Lr---HPnIlk~~d~~e~ 128 (852)
.+..|.|.+.+| .|+|++||.|+... |+.||||+-.....-+.. =-.+++.+|+ -|.|..+...+.-
T Consensus 696 ~~~~~~I~~e~G--------~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfY-I~~q~~~RLk~~~~~~~~~~~~a~~~ 765 (974)
T KOG1166|consen 696 GGEKFCISKEIG--------EGSYGSVYVATHSN-GKLVALKVEKPPNPWEFY-ICLQVMERLKPQMLPSIMHISSAHVF 765 (974)
T ss_pred cceeEEEEeeec--------cccceEEEEeecCC-CcEEEEEeecCCCceeee-ehHHHHHhhchhhhcchHHHHHHHcc
Confidence 345688889999 99999999999976 999999987762211111 1123344444 4566666666555
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC-------C
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC-------G 199 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~-------g 199 (852)
. +.-++|+||.. +|.+++. ..+.+++..++.+..|++..+..|| .++||||||||+|.++... -
T Consensus 766 ~--~~S~lv~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~lH-~~~IIHgDiKPDNfll~~~~~~~~~~~ 838 (974)
T KOG1166|consen 766 Q--NASVLVSEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHLH-AMGIIHGDIKPDNFLLRREICADSDSK 838 (974)
T ss_pred C--CcceeeeeccccccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHHH-hcceecccCCcceeEeecccCCCCccc
Confidence 5 66889999998 7888883 5578999999999999999999999 9999999999999999642 2
Q ss_pred cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCC-CCCccccCcCCC
Q psy3914 200 EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQS-TNRKSLSNIDNI 278 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf-~~~~~l~~~~~i 278 (852)
-++|+|||.+--+.- -.....+....+|-.+-.+|+..+..++..+|.|+|+.++|-|+.|++-- .+........++
T Consensus 839 ~l~lIDfG~siDm~l--fp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q~~~g~~~~~~~~~ 916 (974)
T KOG1166|consen 839 GLYLIDFGRSIDMKL--FPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYMEVKNGSSWMVKTNF 916 (974)
T ss_pred ceEEEecccceeeeE--cCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHHhcCCcceeccccc
Confidence 389999999763321 11123444567788999999999999999999999999999999996432 112222222223
Q ss_pred Ch-----hHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 279 PE-----NLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 279 p~-----~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
+. .+..++..||+.+-..=|...++...
T Consensus 917 ~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~ 949 (974)
T KOG1166|consen 917 PRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTE 949 (974)
T ss_pred hhhhhHHHHHHHHHHHhCcCcccchhHHHHHHH
Confidence 33 35678888998444444555555443
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.57 E-value=1e-14 Score=154.48 Aligned_cols=139 Identities=11% Similarity=0.002 Sum_probs=107.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEE-EcCCCeEEEEEEEeCCCc--------------------------hHHHHHH
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGK-KKGSNEKVTIFLNDSADT--------------------------YEPALSY 107 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~-~k~~g~~VaVKv~~~~~~--------------------------~~~~~~E 107 (852)
-|.+.+.|| .|+++.||.|+ +..+|+.|+||++..... ...+.+|
T Consensus 29 ~~~i~~~Lg--------~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 100 (237)
T smart00090 29 LSAIGGCIS--------TGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKE 100 (237)
T ss_pred hHHhCCeec--------cCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHH
Confidence 489999999 99999999999 667899999999975210 1235789
Q ss_pred HHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC-ce
Q psy3914 108 VKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDAD-LR 184 (852)
Q Consensus 108 ~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~-iv 184 (852)
+..++.+.+. ++.+..++... ..||||||+. +|...+ .....+....+..++.||+.+|.+|| +.| ++
T Consensus 101 ~~~L~~L~~~-~i~~p~~~~~~---~~~lV~E~~~g~~L~~~~----~~~~~~~~~~~~~i~~qi~~~l~~LH-~~g~ii 171 (237)
T smart00090 101 FRNLQRLYEA-GVPVPKPIAWR---RNVLVMEFIGGDGLPAPR----LKDVEPEEEEEFELYDDILEEMRKLY-KEGELV 171 (237)
T ss_pred HHHHHHHHhc-CCCCCeeeEec---CceEEEEEecCCcccccc----cccCCcchHHHHHHHHHHHHHHHHHH-hcCCEE
Confidence 9999999763 23333333322 3589999999 354432 11234566677889999999999999 888 99
Q ss_pred ecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 185 HNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 185 H~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
||||||+||+++ ++.++|+|||.+..
T Consensus 172 H~Dikp~NIli~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 172 HGDLSEYNILVH-DGKVVIIDVSQSVE 197 (237)
T ss_pred eCCCChhhEEEE-CCCEEEEEChhhhc
Confidence 999999999999 88999999999874
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.1e-14 Score=147.70 Aligned_cols=132 Identities=11% Similarity=0.070 Sum_probs=102.5
Q ss_pred eccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhC-----CCCCcceEeeeEEcCCC
Q psy3914 59 GEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTL-----RHPSILTFLDSVESPSK 131 (852)
Q Consensus 59 ~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~L-----rHPnIlk~~d~~e~~~~ 131 (852)
.+.|| +|+++.||. ++.++.. +||++.. ......+.+|++.++.| .||||++++++++++.+
T Consensus 7 ~~~LG--------~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g 75 (210)
T PRK10345 7 QSPLG--------TGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCG 75 (210)
T ss_pred cceec--------CCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCC
Confidence 46788 899999995 7767766 5998876 23456799999999999 57999999999998621
Q ss_pred -CeEE-EEEeecc----cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHH-HHHHhcCCceecccCCCCEEEccC----Cc
Q psy3914 132 -SLVY-LAVEYVE----PIFYHLDNTLKENNEKKQIYISWGIFQITRAL-SFLINDADLRHNHVNHTSIFINSC----GE 200 (852)
Q Consensus 132 -~~~y-IVtE~v~----~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL-~fLH~~~~ivH~DIkp~NIlV~~~----g~ 200 (852)
+.+| +|+||.. +|.+++.+ +.+++. ...+.|++.++ .||| +.+|+||||||+||+++.. +.
T Consensus 76 ~g~v~~~I~e~~G~~~~tL~~~l~~-----~~~~e~--~~~~~~~L~~l~~yLh-~~~IvhrDlKp~NILl~~~~~~~~~ 147 (210)
T PRK10345 76 TGYVYDVIADFDGKPSITLTEFAEQ-----CRYEED--VAQLRQLLKKLKRYLL-DNRIVTMELKPQNILCQRISESEVI 147 (210)
T ss_pred CeEEEEEEecCCCCcchhHHHHHHc-----ccccHh--HHHHHHHHHHHHHHHH-HCCEeecCCCHHHEEEeccCCCCCc
Confidence 2434 7899943 69888842 235544 34578888888 8999 9999999999999999853 37
Q ss_pred EEEcccchh
Q psy3914 201 WKLGGLEYM 209 (852)
Q Consensus 201 ~KL~DFg~a 209 (852)
++|+||+.+
T Consensus 148 ~~LiDg~G~ 156 (210)
T PRK10345 148 PVVCDNIGE 156 (210)
T ss_pred EEEEECCCC
Confidence 999995443
|
|
| >KOG1023|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.8e-14 Score=162.48 Aligned_cols=192 Identities=18% Similarity=0.238 Sum_probs=149.5
Q ss_pred HHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceeccc
Q psy3914 111 LKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHV 188 (852)
Q Consensus 111 Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DI 188 (852)
|+.+.|.|+.++++.+.+. ..+++|.+||. +|.+.+.. ....++......+++.|+.||.|||++.-..||.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~--~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG--PEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecC--CceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeee
Confidence 4678999999999999988 89999999999 79999853 34678888999999999999999996555599999
Q ss_pred CCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCC-------CCCcchhHHhHHHHHHHHHh
Q psy3914 189 NHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSH-------VTKCSTDMYGLGILIWEVFN 261 (852)
Q Consensus 189 kp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-------~~~~~sDIwSLG~ll~el~t 261 (852)
+..|.+++..-.+||.|||+.....+. ..........-...|.|||.+... ..+.+.|+||+|+++||+++
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~--~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~ 153 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEET--AEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF 153 (484)
T ss_pred ccccceeeeeEEEEechhhhccccccc--ccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh
Confidence 999999999999999999997644320 000111111123379999997332 14667999999999999999
Q ss_pred CCCCCCCCccc----------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcC
Q psy3914 262 GPLQSTNRKSL----------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRK 309 (852)
Q Consensus 262 G~~pf~~~~~l----------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~ 309 (852)
...||...... .....+++.+..++++||..+|..||++.++-..++.
T Consensus 154 r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~ 223 (484)
T KOG1023|consen 154 RSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLT 223 (484)
T ss_pred ccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhh
Confidence 98888431110 0112566789999999999999999999999877653
|
|
| >KOG1033|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.7e-15 Score=164.71 Aligned_cols=167 Identities=18% Similarity=0.280 Sum_probs=125.4
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
.++||.|++|. .|.++|.. .......+......++.|++.|+.| .+.+|+|+||.|||...++.+||+|||+.
T Consensus 329 ~~lyI~Mn~c~~~tledWl~r-r~~~e~~s~s~~~~~~~q~~~~~~y----k~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRR-RRTGEERSLSLMLDIFKQIAPAVEY----KGLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhC-CCcccccchhHHHHHHHhhccchhh----ccchhhhccccccccccchhhhhhhhhhe
Confidence 46999999999 69999842 2233445667788999999999999 79999999999999999999999999998
Q ss_pred hcccccc--CCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhC-CCCCCCCccccC--cCCCChh---
Q psy3914 210 EKISEAS--CIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG-PLQSTNRKSLSN--IDNIPEN--- 281 (852)
Q Consensus 210 ~~~~~~~--~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG-~~pf~~~~~l~~--~~~ip~~--- 281 (852)
....... ...........||..||+||.+.+..|+.++|||+||+|++|++.- ...+.....+.. -+.||+.
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip~~~~~ 483 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIPPEFLQ 483 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCChHHhh
Confidence 8654432 1122333446799999999999999999999999999999999872 222211111111 1234422
Q ss_pred ----HHHHHHHhccCCCCCCCCHHHH
Q psy3914 282 ----LKRVYLELISERPNQRPNPADF 303 (852)
Q Consensus 282 ----L~~li~~lL~~nP~~Rps~~el 303 (852)
-..++..|+.+.|..||++...
T Consensus 484 d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 484 DYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred cCcHHHHHHHHhcCCCcccCchHHHH
Confidence 3479999999999999954443
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.3e-13 Score=139.56 Aligned_cols=125 Identities=14% Similarity=0.084 Sum_probs=103.5
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCC----------chHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeec
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSAD----------TYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYV 141 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~----------~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v 141 (852)
.|+++.||.|.. +|..|+||+..... ....+.+|+..+..++|++|.....++... ...++||||+
T Consensus 6 ~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~~~~lv~e~~ 81 (211)
T PRK14879 6 RGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP--ENFIIVMEYI 81 (211)
T ss_pred cCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC--CCCEEEEEEe
Confidence 899999999987 67889999865411 123577899999999999987776666655 6789999999
Q ss_pred c--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 142 E--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 142 ~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
. +|.+++... .. ....++.+|+.+|.+|| ..+++|||++|.||+++ ++.++|+|||++.
T Consensus 82 ~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH-~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~ 142 (211)
T PRK14879 82 EGEPLKDLINSN-------GM-EELELSREIGRLVGKLH-SAGIIHGDLTTSNMILS-GGKIYLIDFGLAE 142 (211)
T ss_pred CCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHH-hCCcccCCCCcccEEEE-CCCEEEEECCccc
Confidence 7 788887321 12 77888999999999999 99999999999999999 7889999999975
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.2e-13 Score=137.95 Aligned_cols=131 Identities=10% Similarity=0.013 Sum_probs=103.5
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC------------------------chHHHHHHHHHH
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD------------------------TYEPALSYVKKL 111 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~------------------------~~~~~~~E~~~L 111 (852)
|.+.+.|| .|+++.||.|... +|+.|+||++.... ....+.+|+..+
T Consensus 17 ~~~~~~i~--------~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 17 ESLGNQIG--------VGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred hhcCCccc--------cCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 78889999 9999999999885 79999999877511 112367888899
Q ss_pred HhCCCCC--cceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecc
Q psy3914 112 KTLRHPS--ILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNH 187 (852)
Q Consensus 112 k~LrHPn--Ilk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~D 187 (852)
..+.|++ ++.+++ . ...|+||||+. +|..... ......++.+|+.++.++| ..+++|||
T Consensus 88 ~~l~~~~i~v~~~~~---~---~~~~lv~e~~~g~~L~~~~~----------~~~~~~~~~~i~~~l~~lh-~~gi~H~D 150 (198)
T cd05144 88 KALYEEGFPVPKPID---W---NRHAVVMEYIDGVELYRVRV----------LEDPEEVLDEILEEIVKAY-KHGIIHGD 150 (198)
T ss_pred HHHHHcCCCCCceee---c---CCceEEEEEeCCcchhhccc----------cccHHHHHHHHHHHHHHHH-HCCCCcCC
Confidence 9998874 444443 2 34689999998 5654431 0234567889999999999 89999999
Q ss_pred cCCCCEEEccCCcEEEcccchhhcc
Q psy3914 188 VNHTSIFINSCGEWKLGGLEYMEKI 212 (852)
Q Consensus 188 Ikp~NIlV~~~g~~KL~DFg~a~~~ 212 (852)
|+|+||+++.++.++|+|||.+...
T Consensus 151 l~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 151 LSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred CCcccEEEcCCCcEEEEECCccccC
Confidence 9999999999999999999998643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.1e-12 Score=134.48 Aligned_cols=122 Identities=17% Similarity=0.091 Sum_probs=96.6
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCC----------chHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeec
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSAD----------TYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYV 141 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~----------~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v 141 (852)
.|+++.||+|.. +|..|+||++.... ....+.+|+++++.++|+++....-+.... ...++||||+
T Consensus 4 ~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~~~~lv~e~~ 79 (199)
T TIGR03724 4 KGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP--DNKTIVMEYI 79 (199)
T ss_pred CCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC--CCCEEEEEEE
Confidence 899999999985 67889999865411 124567899999999988755444333344 5579999999
Q ss_pred c--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 142 E--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 142 ~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
. +|.+.+... . . .++.||+.+|.+|| ..+++|||++|.||+++ ++.++|+|||++.
T Consensus 80 ~g~~l~~~~~~~----~----~---~~~~~i~~~l~~lH-~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~ 137 (199)
T TIGR03724 80 EGKPLKDVIEEG----N----D---ELLREIGRLVGKLH-KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGK 137 (199)
T ss_pred CCccHHHHHhhc----H----H---HHHHHHHHHHHHHH-HCCeecCCCCcceEEEE-CCcEEEEECCCCc
Confidence 7 687776321 0 0 67889999999999 99999999999999999 8999999999975
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.7e-12 Score=153.57 Aligned_cols=133 Identities=12% Similarity=0.007 Sum_probs=105.4
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----C-----CchHHHHHHHHHHHhCCCCCcceE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----A-----DTYEPALSYVKKLKTLRHPSILTF 122 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~-----~~~~~~~~E~~~Lk~LrHPnIlk~ 122 (852)
...|...+.|| .|++++||+|.... ..+++|+... . ...+.+.+|+++++.++|++|+..
T Consensus 332 ~~~~~~~~~iG--------~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p 401 (535)
T PRK09605 332 KRRKIPDHLIG--------KGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTP 401 (535)
T ss_pred ccccCccceec--------cCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCee
Confidence 34456678888 99999999998743 3444443322 0 112457899999999999999887
Q ss_pred eeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc
Q psy3914 123 LDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE 200 (852)
Q Consensus 123 ~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~ 200 (852)
+.+..+. ...|+||||+. +|.+++. ....++.||+.+|.+|| +.+++||||||+||++ .++.
T Consensus 402 ~~~~~~~--~~~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH-~~giiHrDlkp~NILl-~~~~ 465 (535)
T PRK09605 402 VIYDVDP--EEKTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLH-KAGIVHGDLTTSNFIV-RDDR 465 (535)
T ss_pred EEEEEeC--CCCEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHH-hCCCccCCCChHHEEE-ECCc
Confidence 7666655 66899999998 7888773 24668899999999999 8999999999999999 6788
Q ss_pred EEEcccchhhc
Q psy3914 201 WKLGGLEYMEK 211 (852)
Q Consensus 201 ~KL~DFg~a~~ 211 (852)
++|+|||+++.
T Consensus 466 ~~liDFGla~~ 476 (535)
T PRK09605 466 LYLIDFGLGKY 476 (535)
T ss_pred EEEEeCccccc
Confidence 99999999863
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.1e-12 Score=132.57 Aligned_cols=124 Identities=14% Similarity=0.114 Sum_probs=92.4
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCC---------------CchHHHHHHHHHHHhCCCCCc--ceEeeeEEcCCCC--
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSA---------------DTYEPALSYVKKLKTLRHPSI--LTFLDSVESPSKS-- 132 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---------------~~~~~~~~E~~~Lk~LrHPnI--lk~~d~~e~~~~~-- 132 (852)
.|+.|.|+.. +..++||.+... .....+.+|+..+..|+|++| +..+.........
T Consensus 45 ~gtv~~v~~~-----~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~ 119 (239)
T PRK01723 45 RGTTWFVQTP-----GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFY 119 (239)
T ss_pred CccEEEEEeC-----CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcce
Confidence 5555555443 678899988541 122467889999999998885 6677765443111
Q ss_pred eEEEEEeecc---cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 133 LVYLAVEYVE---PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 133 ~~yIVtE~v~---~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+||||++. +|.+++.. ..+++.. +.||+.+|.+|| +.||+|+||||.||+++.++.++|+|||.+
T Consensus 120 ~~~lV~e~l~G~~~L~~~l~~-----~~l~~~~----~~~i~~~l~~lH-~~GI~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 120 RADILIERIEGARDLVALLQE-----APLSEEQ----WQAIGQLIARFH-DAGVYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred eeeEEEEecCCCCCHHHHHhc-----CCCCHHH----HHHHHHHHHHHH-HCCCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 2359999998 57777632 3445433 579999999999 999999999999999999999999999997
Q ss_pred h
Q psy3914 210 E 210 (852)
Q Consensus 210 ~ 210 (852)
+
T Consensus 190 ~ 190 (239)
T PRK01723 190 E 190 (239)
T ss_pred c
Confidence 6
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.7e-12 Score=127.79 Aligned_cols=126 Identities=15% Similarity=0.041 Sum_probs=91.7
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCC-----chH---------------------HHHHHHHHHHhCCCCC--cceEe
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSAD-----TYE---------------------PALSYVKKLKTLRHPS--ILTFL 123 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~-----~~~---------------------~~~~E~~~Lk~LrHPn--Ilk~~ 123 (852)
.|++++||.|.+. +|+.|+||++.... ... ....|+..+..+.+.+ +.+++
T Consensus 7 ~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~ 85 (187)
T cd05119 7 TGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVPKPI 85 (187)
T ss_pred cccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCCceE
Confidence 8999999999987 89999999987611 111 1145666666665443 44444
Q ss_pred eeEEcCCCCeEEEEEeeccc---HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-CCceecccCCCCEEEccCC
Q psy3914 124 DSVESPSKSLVYLAVEYVEP---IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLIND-ADLRHNHVNHTSIFINSCG 199 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~~---L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~-~~ivH~DIkp~NIlV~~~g 199 (852)
.. ...++||||+.. +...+.... . ...+..++.+++.++.++| . .+++|+||+|+||+++ ++
T Consensus 86 ~~------~~~~lv~e~~~g~~~~~~~l~~~~-----~-~~~~~~~~~~~~~~l~~lh-~~~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 86 DL------NRHVLVMEFIGGDGIPAPRLKDVR-----L-LEDPEELYDQILELMRKLY-REAGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred ec------CCCEEEEEEeCCCCccChhhhhhh-----h-cccHHHHHHHHHHHHHHHh-hccCcCcCCCChhhEEEE-CC
Confidence 32 236899999982 112332111 1 1567888999999999999 6 9999999999999999 89
Q ss_pred cEEEcccchhhcc
Q psy3914 200 EWKLGGLEYMEKI 212 (852)
Q Consensus 200 ~~KL~DFg~a~~~ 212 (852)
.++|+|||.+...
T Consensus 152 ~~~liDfg~a~~~ 164 (187)
T cd05119 152 KVYIIDVPQAVEI 164 (187)
T ss_pred cEEEEECcccccc
Confidence 9999999998743
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG1266|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.5e-12 Score=134.24 Aligned_cols=231 Identities=19% Similarity=0.196 Sum_probs=156.3
Q ss_pred ceEEEEEEEcCCCeEEEEEEEeC------CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC---CCCeEEEEEeecc--c
Q psy3914 75 FWKFHGGKKKGSNEKVTIFLNDS------ADTYEPALSYVKKLKTLRHPSILTFLDSVESP---SKSLVYLAVEYVE--P 143 (852)
Q Consensus 75 ~~~Vy~a~~k~~g~~VaVKv~~~------~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~---~~~~~yIVtE~v~--~ 143 (852)
+-.||.+-+...|-+|.--.+.. ..+.+..+.-+..|-.+-|-||++++.++.+. .+....|++||+. +
T Consensus 79 id~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs 158 (458)
T KOG1266|consen 79 IDDVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGS 158 (458)
T ss_pred hHHHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchh
Confidence 34466666655555543211111 12223333445567778899999999988764 1245889999999 6
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC--ceecccCCCCEEEccCCcEEEcccchhhccccccCCCCc
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDAD--LRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMK 221 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~--ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~ 221 (852)
|..+|++.......+......+++-||+.||.||| .+. ++|+++..+.||+..+|-+|++--...............
T Consensus 159 ~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLh-s~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~ 237 (458)
T KOG1266|consen 159 LKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLH-SCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREA 237 (458)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh-ccCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHh
Confidence 99999776666677888899999999999999999 664 899999999999999999998743322111000000000
Q ss_pred ccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCC-CCCccccC-------cCCCChh-HHHHHHHhccC
Q psy3914 222 RYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQS-TNRKSLSN-------IDNIPEN-LKRVYLELISE 292 (852)
Q Consensus 222 ~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf-~~~~~l~~-------~~~ip~~-L~~li~~lL~~ 292 (852)
......+-++|.+||.-...+.+.++|||+||+...+|.-+..-. .+.+.... +-.+... -+.++.+|++.
T Consensus 238 Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~len~lqr~~i~kcl~~ 317 (458)
T KOG1266|consen 238 EKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLENGLQRGSITKCLEG 317 (458)
T ss_pred hhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeeccCccccCcCcccccC
Confidence 011122345899999976666677899999999999998875442 22222111 1112222 34678999999
Q ss_pred CCCCCCCHHHHHHh
Q psy3914 293 RPNQRPNPADFIMR 306 (852)
Q Consensus 293 nP~~Rps~~elL~~ 306 (852)
.|..||++..++-|
T Consensus 318 eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 318 EPNGRPDARLLLFH 331 (458)
T ss_pred CCCCCcchhhhhcC
Confidence 99999999999887
|
|
| >KOG0590|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.2e-13 Score=159.29 Aligned_cols=245 Identities=14% Similarity=0.242 Sum_probs=188.6
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCC-CeEEEEEEEeC----CCchHHHHHHHHHHHhCC-CCCcceEeeeE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS-NEKVTIFLNDS----ADTYEPALSYVKKLKTLR-HPSILTFLDSV 126 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~-g~~VaVKv~~~----~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~ 126 (852)
...|.+.+.|| .|+++.+-......+ ...++++.+.. ......+..|..+-+.+. |+|++.+++..
T Consensus 19 ~~~~~~~~~ig--------~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~ 90 (601)
T KOG0590|consen 19 NSQYKLSRSIG--------KGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPS 90 (601)
T ss_pred ccccccccccc--------ccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCcc
Confidence 56799999999 888998887766443 34555665544 234445566787778887 99999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCC-CCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC-cEE
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENN-EKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG-EWK 202 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~-~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g-~~K 202 (852)
... ...++++++.. ++...+. ..+. ..+......++.|+..+|.|+|...++.|+||+|+|.+++..| ..+
T Consensus 91 ~~~--~~~~~~~~~s~g~~~f~~i~---~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~ 165 (601)
T KOG0590|consen 91 SSP--RSYLLSLSYSDGGSLFSKIS---HPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALK 165 (601)
T ss_pred CCC--cccccccCcccccccccccc---cCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCccc
Confidence 887 88999999966 3444331 2222 5667778889999999999999778999999999999999999 999
Q ss_pred EcccchhhccccccCCCCcccccccC-CCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCc----------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYED-QSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRK---------- 270 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~g-t~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~---------- 270 (852)
+.|||++..+..... ........+| ++.|.|||...+ .......|+||+|+++..+++|..|+....
T Consensus 166 ~~df~~At~~~~~~g-~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~ 244 (601)
T KOG0590|consen 166 IADFGLATAYRNKNG-AERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWK 244 (601)
T ss_pred CCCchhhccccccCC-cceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeec
Confidence 999999986543111 1222334566 899999999855 566778999999999999999998874211
Q ss_pred ------cccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 271 ------SLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 271 ------~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
......++......++.+++..+|..|.+..++-.+ +|+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d-----~~~~~ 291 (601)
T KOG0590|consen 245 SNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD-----NWLSS 291 (601)
T ss_pred ccccccccCccccCChhhhhcccccccCCchhcccccccccc-----ccccc
Confidence 122356788899999999999999999999988765 56544
|
|
| >KOG0601|consensus | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.1e-12 Score=145.08 Aligned_cols=240 Identities=15% Similarity=0.147 Sum_probs=181.2
Q ss_pred CCCCeeEeccccCCCCCCccc--CCceEEEEEEE--cCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCC-CCCcceE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQK--HTFWKFHGGKK--KGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLR-HPSILTF 122 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~--Gs~~~Vy~a~~--k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~Lr-HPnIlk~ 122 (852)
+...+.+...+| . |.+|.+|.+.. +.++..+++|.-+. ......-.+++...++++ |+|.++.
T Consensus 112 ~~~~~~~~~~~g--------~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~ 183 (524)
T KOG0601|consen 112 FDQRFPISSRTG--------SLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRD 183 (524)
T ss_pred hhhhcccccccc--------cCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCcccccccc
Confidence 344566677777 5 89999999998 88999999997544 122223345666666665 9999999
Q ss_pred eeeEEcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHH----HHHHHHhcCCceecccCCCCEEEcc
Q psy3914 123 LDSVESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITR----ALSFLINDADLRHNHVNHTSIFINS 197 (852)
Q Consensus 123 ~d~~e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~----aL~fLH~~~~ivH~DIkp~NIlV~~ 197 (852)
+..++.. +..|+-||++. .|..+... ....+++..++..+.+... ||..+| ..+++|.|++|.||+...
T Consensus 184 ~~~~e~~--~~lfiqtE~~~~sl~~~~~~---~~~~~p~~~l~~~~~~~~~~~~~al~~~h-s~~~~~~~~kp~~i~~~~ 257 (524)
T KOG0601|consen 184 SPAWEGS--GILFIQTELCGESLQSYCHT---PCNFLPDNLLWNSLRDWLSRDVTALSHLH-SNNIVHDDLKPANIFTTS 257 (524)
T ss_pred CcccccC--CcceeeeccccchhHHhhhc---ccccCCchhhhhHHhhhhhcccccccccC-CCcccccccchhheeccc
Confidence 9999977 99999999999 56666532 2234778888899999999 999999 999999999999999999
Q ss_pred C-CcEEEcccchhhccccccCCCCcc-cccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCC--ccc-
Q psy3914 198 C-GEWKLGGLEYMEKISEASCIPMKR-YSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNR--KSL- 272 (852)
Q Consensus 198 ~-g~~KL~DFg~a~~~~~~~~~~~~~-~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~--~~l- 272 (852)
+ ...+++|||++..+.+........ .....|...|++||...+ .++...|+|+||.++.+...+....... ...
T Consensus 258 ~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~ 336 (524)
T KOG0601|consen 258 DWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSWS 336 (524)
T ss_pred ccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCcc
Confidence 9 889999999998776543221111 112256668999999854 3567899999999999998875443211 111
Q ss_pred ---------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 273 ---------SNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 273 ---------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
+........+...+..|+..+|..|++...+..+
T Consensus 337 ~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 337 QLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred ccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 2233445567778999999999999999888775
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.3e-11 Score=115.75 Aligned_cols=123 Identities=19% Similarity=0.087 Sum_probs=101.9
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCC--CCcceEeeeEEcCCCCeEEEEEeecc--cHHHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRH--PSILTFLDSVESPSKSLVYLAVEYVE--PIFYH 147 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrH--PnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~ 147 (852)
.|.++.||.++.. +..++||.+........+.+|+..++.++| +++.+++...+.. +..|+++||+. ++..+
T Consensus 8 ~g~~~~v~~~~~~--~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~--~~~~~v~e~~~g~~~~~~ 83 (155)
T cd05120 8 GGLTNRVYLLGTK--DEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESD--GWSYLLMEWIEGETLDEV 83 (155)
T ss_pred cccccceEEEEec--CCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC--CccEEEEEecCCeecccC
Confidence 8899999999984 378999998763334578899999999987 5899999988876 78999999997 23211
Q ss_pred HHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC---CceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 148 LDNTLKENNEKKQIYISWGIFQITRALSFLINDA---DLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 148 L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~---~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
+......++.+++.+|.+|| .. +++|||++|.||++++.+.++|.|||.+.
T Consensus 84 -----------~~~~~~~~~~~~~~~l~~lh-~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~ 137 (155)
T cd05120 84 -----------SEEEKEDIAEQLAELLAKLH-QLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAG 137 (155)
T ss_pred -----------CHHHHHHHHHHHHHHHHHHh-CCCceEEEecCCCcceEEEECCcEEEEEeccccc
Confidence 34456677899999999999 54 69999999999999998999999999975
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.9e-09 Score=124.17 Aligned_cols=135 Identities=10% Similarity=0.102 Sum_probs=89.8
Q ss_pred ccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchH-------------------------------------
Q psy3914 60 EPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYE------------------------------------- 102 (852)
Q Consensus 60 e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~------------------------------------- 102 (852)
+++| .|+++.||+|+.+ +|+.|+||+.... ..+
T Consensus 123 ~pla--------saSigQVh~A~l~-~G~~VaVKv~rp~-i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 192 (437)
T TIGR01982 123 KPLA--------AASIAQVHRARLV-DGKEVAVKVLRPG-IEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEK 192 (437)
T ss_pred ccee--------eeehhheEEEEec-CCCEEEEEeeCCC-cHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHH
Confidence 5687 8999999999986 7899999998751 111
Q ss_pred ------HHHHHHHHHHhC----CCCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHH
Q psy3914 103 ------PALSYVKKLKTL----RHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQI 170 (852)
Q Consensus 103 ------~~~~E~~~Lk~L----rHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI 170 (852)
.+.+|.+.+.++ +|.+-+.+-.++.+.+ +..+|||||+. +|.+++... . ...+. ..+..++
T Consensus 193 ~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~-~~~vLvmE~i~G~~L~~~~~~~-~--~~~~~---~~ia~~~ 265 (437)
T TIGR01982 193 TLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRT-SERVLTMEWIDGIPLSDIAALD-E--AGLDR---KALAENL 265 (437)
T ss_pred HHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhc-CCceEEEEeECCcccccHHHHH-h--cCCCH---HHHHHHH
Confidence 123344444444 2333333333332211 44799999998 677665321 1 11222 2334444
Q ss_pred HH-HHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhcc
Q psy3914 171 TR-ALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKI 212 (852)
Q Consensus 171 ~~-aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~ 212 (852)
+. .+..+| ..|++|+|+||.||+++.+|.++|+|||++..+
T Consensus 266 ~~~~l~ql~-~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 266 ARSFLNQVL-RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred HHHHHHHHH-hCCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 44 467889 899999999999999999999999999998643
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.2e-10 Score=132.47 Aligned_cols=137 Identities=9% Similarity=0.070 Sum_probs=90.6
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC------------------------------------
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD------------------------------------ 99 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~------------------------------------ 99 (852)
|+. +++| .|+++.||.|+.+.+|+.|+||+....-
T Consensus 122 fd~-~Pla--------saSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e 192 (537)
T PRK04750 122 FDI-KPLA--------SASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAE 192 (537)
T ss_pred cCh-hhhc--------CCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHH
Confidence 454 6888 8999999999999889999999997510
Q ss_pred chHH------HHHHHHHHHhC----CCCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCC----CCCHHHH
Q psy3914 100 TYEP------ALSYVKKLKTL----RHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENN----EKKQIYI 163 (852)
Q Consensus 100 ~~~~------~~~E~~~Lk~L----rHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~----~l~e~~i 163 (852)
.... +.+|+..+.++ .+.+.+.+-.++.+- .+..+|||||+. +|.++- .. ...+ .+.+..+
T Consensus 193 ~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~-st~~VLvmE~i~G~~l~d~~-~l-~~~g~d~~~la~~~v 269 (537)
T PRK04750 193 FEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDY-CSETVMVMERMYGIPVSDVA-AL-RAAGTDMKLLAERGV 269 (537)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeeccc-CCCceEEEeeecCccHHhHH-HH-HhcCCCHHHHHHHHH
Confidence 0111 22333333333 244444444444431 145789999998 676642 11 1111 2334444
Q ss_pred HHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC----cEEEcccchhhcc
Q psy3914 164 SWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG----EWKLGGLEYMEKI 212 (852)
Q Consensus 164 ~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g----~~KL~DFg~a~~~ 212 (852)
..++.||. ..|++|+|+||.||+|+.+| .+++.|||++..+
T Consensus 270 ~~~~~Qif--------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 270 EVFFTQVF--------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred HHHHHHHH--------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 45555553 57999999999999999988 9999999998643
|
|
| >KOG3741|consensus | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.8e-08 Score=111.63 Aligned_cols=210 Identities=16% Similarity=0.145 Sum_probs=155.5
Q ss_pred CceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC--CCeEEEEEeecc---cHHH
Q psy3914 74 TFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS--KSLVYLAVEYVE---PIFY 146 (852)
Q Consensus 74 s~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~--~~~~yIVtE~v~---~L~~ 146 (852)
...+.|+++...||..|++|.++. .......-.-+++++++.|+||+++.+++.+.. ...+++|+.|.+ +|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 346789999999999999999954 122223445578999999999999999987431 257999999998 4665
Q ss_pred HHHhh-----------hhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccc
Q psy3914 147 HLDNT-----------LKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEA 215 (852)
Q Consensus 147 ~L~~~-----------~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~ 215 (852)
+.-.. ...+...++..++.++.|++.||.+|| +.|+.-+-|.|.+|+|+.+-.++|++.|+...+..+
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH-ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH-SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH-hcCceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 53211 112345788999999999999999999 999999999999999998889999999886533222
Q ss_pred cCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----c-cCcCCCChhHHHHHHHh
Q psy3914 216 SCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----L-SNIDNIPENLKRVYLEL 289 (852)
Q Consensus 216 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----l-~~~~~ip~~L~~li~~l 289 (852)
.. +.+.. -.+-|.=.||.++..|.+|..-....+. + .....++.++++++.-+
T Consensus 447 ~~------------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~~~yS~D~rn~v~yl 505 (655)
T KOG3741|consen 447 PT------------------EPLES---QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRITTTYSTDLRNVVEYL 505 (655)
T ss_pred CC------------------cchhH---HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhhhhhhHHHHHHHHHH
Confidence 11 11111 1356888999999999999544211111 1 12346688899999999
Q ss_pred ccCCCCCCCCHHHHHHh
Q psy3914 290 ISERPNQRPNPADFIMR 306 (852)
Q Consensus 290 L~~nP~~Rps~~elL~~ 306 (852)
.+.+++. -++.+++.+
T Consensus 506 ~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 506 ESLNFRE-KSIQDLLPM 521 (655)
T ss_pred HhcCccc-ccHHHHHHH
Confidence 9999987 688888876
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.3e-09 Score=107.18 Aligned_cols=127 Identities=8% Similarity=0.028 Sum_probs=94.0
Q ss_pred cCCceEEEEEEEcC------CCeEEEEEEEeC--------------CC----------chHHH----HHHHHHHHhCCC-
Q psy3914 72 KHTFWKFHGGKKKG------SNEKVTIFLNDS--------------AD----------TYEPA----LSYVKKLKTLRH- 116 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~------~g~~VaVKv~~~--------------~~----------~~~~~----~~E~~~Lk~LrH- 116 (852)
.|-=+.||.|.... .+..||||++.. +. ....+ ++|++.|++++.
T Consensus 7 ~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~rl~~~ 86 (197)
T cd05146 7 TGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKRMQKA 86 (197)
T ss_pred cCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 77888999998653 357999999876 10 02233 489999999963
Q ss_pred -CCcceEeeeEEcCCCCeEEEEEeecc-c-HH-HHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHH-HhcCCceecccCCC
Q psy3914 117 -PSILTFLDSVESPSKSLVYLAVEYVE-P-IF-YHLDNTLKENNEKKQIYISWGIFQITRALSFL-INDADLRHNHVNHT 191 (852)
Q Consensus 117 -PnIlk~~d~~e~~~~~~~yIVtE~v~-~-L~-~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fL-H~~~~ivH~DIkp~ 191 (852)
-++.+++++ ...+|||||+. + +. ..|. +..+++..+..++.|++.+|..| | .+|+|||||++.
T Consensus 87 Gv~vP~pi~~------~~~~lvME~Ig~~~~~~~~Lk-----d~~~~~~~~~~i~~~i~~~l~~l~H-~~glVHGDLs~~ 154 (197)
T cd05146 87 GIPCPEVVVL------KKHVLVMSFIGDDQVPAPKLK-----DAKLNDEEMKNAYYQVLSMMKQLYK-ECNLVHADLSEY 154 (197)
T ss_pred CCCCCeEEEe------cCCEEEEEEcCCCCccchhhh-----ccccCHHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHH
Confidence 566777764 23688999997 2 21 1221 12345556777889999999999 7 899999999999
Q ss_pred CEEEccCCcEEEcccchhhc
Q psy3914 192 SIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 192 NIlV~~~g~~KL~DFg~a~~ 211 (852)
||++. +|.+.|+|||.+..
T Consensus 155 NIL~~-~~~v~iIDF~qav~ 173 (197)
T cd05146 155 NMLWH-DGKVWFIDVSQSVE 173 (197)
T ss_pred HEEEE-CCcEEEEECCCcee
Confidence 99996 57899999999864
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=98.87 E-value=7.4e-09 Score=102.96 Aligned_cols=119 Identities=15% Similarity=0.075 Sum_probs=87.6
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCC-chHHHHHHHHHHHhCCCCCc-ceEeeeEEcCCCCeEEEEEeecc--cHHHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSAD-TYEPALSYVKKLKTLRHPSI-LTFLDSVESPSKSLVYLAVEYVE--PIFYH 147 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~-~~~~~~~E~~~Lk~LrHPnI-lk~~d~~e~~~~~~~yIVtE~v~--~L~~~ 147 (852)
.|..+.||+++. .+..|+||+..... ......+|+..++.+.+.++ .+++.... ...++|||++. ++...
T Consensus 8 ~G~~~~vy~~~~--~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~----~~~~lv~e~i~G~~l~~~ 81 (170)
T cd05151 8 GGMTNKNYRVEV--ANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDP----ETGVLITEFIEGSELLTE 81 (170)
T ss_pred CcccCceEEEEE--CCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeC----CCCeEEEEecCCCccccc
Confidence 677889999887 47889999987632 23346889999998875544 45555433 23579999998 33221
Q ss_pred HHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCc-----eecccCCCCEEEccCCcEEEcccchhh
Q psy3914 148 LDNTLKENNEKKQIYISWGIFQITRALSFLINDADL-----RHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 148 L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~i-----vH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
.......+.+++.+|..|| ..++ +|||++|.||+++ ++.++|+|||.+.
T Consensus 82 ------------~~~~~~~~~~l~~~l~~LH-~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 82 ------------DFSDPENLEKIAKLLKKLH-SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ------------cccCHHHHHHHHHHHHHHh-CCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 0111234679999999999 7774 9999999999998 6789999999975
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0211|consensus | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.4e-08 Score=116.59 Aligned_cols=231 Identities=19% Similarity=0.232 Sum_probs=187.3
Q ss_pred hhhhhccCCcccccccchhhhHhhhhcCCCcccchhhhh-------hhcccCChhhhhcchhhhhhhccccCCHHHHHHH
Q psy3914 343 LASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLF-------KIGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRL 415 (852)
Q Consensus 343 L~~~l~~fP~~~~~~kiLP~Ll~~~e~~~~~~~vL~~ll-------ki~~~l~~~ef~~~i~P~i~~LF~~~dr~iR~~L 415 (852)
.....+.+|..-...-++|.++..+.... +.|...+. ..-....-+.+.+..+|.|..+-....-.+|..+
T Consensus 422 ~~~~~p~~~k~~ti~~llp~~~~~l~de~--~~V~lnli~~ls~~~~v~~v~g~~~~s~slLp~i~el~~d~~wRvr~ai 499 (759)
T KOG0211|consen 422 ITGLSPILPKERTISELLPLLIGNLKDED--PIVRLNLIDKLSLLEEVNDVIGISTVSNSLLPAIVELAEDLLWRVRLAI 499 (759)
T ss_pred ccccCccCCcCcCccccChhhhhhcchhh--HHHHHhhHHHHHHHHhccCcccchhhhhhhhhhhhhhccchhHHHHHHH
Confidence 33445666655555666777665544321 22222222 1112223355677889999998555545678999
Q ss_pred HHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehh
Q psy3914 416 LLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTT 495 (852)
Q Consensus 416 L~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~ 495 (852)
++.++..+..+....+.++.-+.+..++.|....||+++.+.+..++..++...-...+++.+..... ++.+.+|..++
T Consensus 500 l~~ip~la~q~~~~~~~~~~~~l~~~~l~d~v~~Ir~~aa~~l~~l~~~~G~~w~~~~~i~k~L~~~~-q~~y~~R~t~l 578 (759)
T KOG0211|consen 500 LEYIPQLALQLGVEFFDEKLAELLRTWLPDHVYSIREAAARNLPALVETFGSEWARLEEIPKLLAMDL-QDNYLVRMTTL 578 (759)
T ss_pred HHHHHHHHHhhhhHHhhHHHHHHHHhhhhhhHHHHHHHHHHHhHHHHHHhCcchhHHHhhHHHHHHhc-CcccchhhHHH
Confidence 99999999999999999999999999999999999999999999999999977767778888777764 55799999999
Q ss_pred hhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccCCChhhHHHHHHH
Q psy3914 496 VCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKT 575 (852)
Q Consensus 496 iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~ 575 (852)
.|+.-|++.++.+...+.|+|.|.++.+||.+.+|+.+++.+..+..+......-..|+|++..+..|++.+||-.|..+
T Consensus 579 ~si~~la~v~g~ei~~~~Llp~~~~l~~D~vanVR~nvak~L~~i~~~L~~~~~~~~v~pll~~L~~d~~~dvr~~a~~a 658 (759)
T KOG0211|consen 579 FSIHELAEVLGQEITCEDLLPVFLDLVKDPVANVRINVAKHLPKILKLLDESVRDEEVLPLLETLSSDQELDVRYRAILA 658 (759)
T ss_pred HHHHHHHHHhccHHHHHHHhHHHHHhccCCchhhhhhHHHHHHHHHhhcchHHHHHHHHHHHHHhccCcccchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999755443
Q ss_pred H
Q psy3914 576 I 576 (852)
Q Consensus 576 i 576 (852)
+
T Consensus 659 ~ 659 (759)
T KOG0211|consen 659 F 659 (759)
T ss_pred H
Confidence 3
|
|
| >KOG0601|consensus | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.1e-09 Score=121.69 Aligned_cols=235 Identities=14% Similarity=0.051 Sum_probs=167.0
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEc-CCCeEEEEEEEeC----CCchHHHHHHHHHHHhCC-CCCcceEeeeE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK-GSNEKVTIFLNDS----ADTYEPALSYVKKLKTLR-HPSILTFLDSV 126 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k-~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~ 126 (852)
..+|.....|+ .+.+..+|....+ .++..+++|.... .........|+.+...+. |.+++.++..+
T Consensus 264 ~~df~~v~~i~--------~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W 335 (524)
T KOG0601|consen 264 LTDFGLVSKIS--------DGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSW 335 (524)
T ss_pred cCCcceeEEcc--------CCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCc
Confidence 34567788888 7888888887766 6778888886655 122233455666666664 88888888888
Q ss_pred EcCCCCeEEEEEeecccHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC-CcEEEcc
Q psy3914 127 ESPSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC-GEWKLGG 205 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~-g~~KL~D 205 (852)
... ...||--|||.+...-+.. .....+++..++....|++.++.|+| ...++|+|++|+||++..+ +.-+++|
T Consensus 336 ~~~--r~~~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~-s~~~~~~d~~psni~i~~~~~~~~~~~ 410 (524)
T KOG0601|consen 336 SQL--RQGYIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIH-SKLFVHLDVKPSNILISNDGFFSKLGD 410 (524)
T ss_pred ccc--ccccCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhcccccc-chhhhcccccccceeeccchhhhhccc
Confidence 776 7788999999732222211 11245677888999999999999999 9999999999999999886 7788999
Q ss_pred cchhhccccccCCCCcccccccCCCcc-cCCccccCCCCCcchhHHhHHHHHHHHHhCCCC-CCCC-------ccccCcC
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTY-QIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQ-STNR-------KSLSNID 276 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y-~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~p-f~~~-------~~l~~~~ 276 (852)
|++...+. .........+..| .++.......+..+.|+|+||.-+++..+|... ..+. .......
T Consensus 411 ~~~~t~~~------~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~i~~~~~p~~~ 484 (524)
T KOG0601|consen 411 FGCWTRLA------FSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLTIRSGDTPNLP 484 (524)
T ss_pred cccccccc------eecccccccccccccchhhccccccccccccccccccccccccCcccCcccccceeeecccccCCC
Confidence 99976321 1111111222234 244444677788899999999999999998533 3221 1222334
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
..+..+..+.+.++.+++..|+.+.++..+
T Consensus 485 ~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~ 514 (524)
T KOG0601|consen 485 GLKLQLQVLLKVMINPDRKRRPSAVELSLH 514 (524)
T ss_pred chHHhhhhhhhhhcCCccccchhhhhhccc
Confidence 455678888999999999999998887765
|
|
| >KOG0606|consensus | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.2e-09 Score=130.90 Aligned_cols=250 Identities=18% Similarity=0.206 Sum_probs=175.8
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+.+.+.+. .++++.++.++...+|....+++... ....+.++.+-.++-.-+||-++...-.+.-
T Consensus 806 ~~i~~p~q--------S~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~-- 875 (1205)
T KOG0606|consen 806 FEITKPSQ--------SGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPC-- 875 (1205)
T ss_pred ceeccccc--------CCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCC--
Confidence 55666555 88999999999988886666665544 2223333333333333455666655554333
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
+...+++++|+. +|...|++. +..+.+-..-++..++.++.+|| ...+.|+|++|.|+++..+|..++.+|+.
T Consensus 876 rsP~~L~~~~~~~~~~~Skl~~~----~~~saepaRs~i~~~vqs~e~L~-s~~r~h~~~~p~~~l~~~~gh~~l~~~~t 950 (1205)
T KOG0606|consen 876 RSPLPLVGHYLNGGDLPSKLHNS----GCLSAEPARSPILERVQSLESLH-SSLRKHRDLKPDSLLIAYDGHRPLTDFGT 950 (1205)
T ss_pred CCCcchhhHHhccCCchhhhhcC----CCcccccccchhHHHHhhhhccc-cchhhcccccccchhhcccCCcccCcccc
Confidence 377999999995 677777432 45666677778889999999999 77799999999999999999999999985
Q ss_pred hhcccc------cc-----CCCC----------------cccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh
Q psy3914 209 MEKISE------AS-----CIPM----------------KRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN 261 (852)
Q Consensus 209 a~~~~~------~~-----~~~~----------------~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t 261 (852)
....+. .. ..+. ..-....+|+.|.+||...+......+|.|++|++++|.++
T Consensus 951 ~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~ 1030 (1205)
T KOG0606|consen 951 LSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLT 1030 (1205)
T ss_pred ccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhc
Confidence 443221 00 0000 01123468999999999988888889999999999999999
Q ss_pred CCCCCCCCccccC--------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHHHHH
Q psy3914 262 GPLQSTNRKSLSN--------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDAL 322 (852)
Q Consensus 262 G~~pf~~~~~l~~--------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv~~l 322 (852)
|..||......+. ....+...++++.+++..+|.+|..+..-.+ .+.++||+..-...+
T Consensus 1031 g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e--~k~~~~~~~~~~~~l 1103 (1205)
T KOG0606|consen 1031 GIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAE--VKGHPFFQDVDWENL 1103 (1205)
T ss_pred CCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccc--cccCCccCCCCcccc
Confidence 9999954322222 2355778999999999999999988762222 122489987654443
|
|
| >KOG1243|consensus | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.6e-08 Score=115.28 Aligned_cols=187 Identities=18% Similarity=0.168 Sum_probs=138.9
Q ss_pred hhcccCChhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHh
Q psy3914 382 KIGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHL 461 (852)
Q Consensus 382 ki~~~l~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l 461 (852)
+....++.+--..+|+|.+.-.+..-+ +.. ..|.-|=.+..-++.+.+..+|.|.|+..|...+-.||-.-|..+...
T Consensus 280 ~~l~~~pe~i~~~kvlp~Ll~~~~~g~-a~~-~~ltpl~k~~k~ld~~eyq~~i~p~l~kLF~~~Dr~iR~~LL~~i~~~ 357 (690)
T KOG1243|consen 280 DRLDNFPEEIIASKVLPILLAALEFGD-AAS-DFLTPLFKLGKDLDEEEYQVRIIPVLLKLFKSPDRQIRLLLLQYIEKY 357 (690)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHhhccc-cch-hhhhHHHHhhhhccccccccchhhhHHHHhcCcchHHHHHHHHhHHHH
Confidence 333445555556677777776655555 111 122222334555777779999999999999999999999999999999
Q ss_pred cccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHh
Q psy3914 462 APKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQ 541 (852)
Q Consensus 462 ~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~ 541 (852)
++.|+..+++..++||++.-+ .|.++.||--|+.|+.-|++.|++.+....|+-.|.|.--|-....|......+..+.
T Consensus 358 i~~Lt~~~~~d~I~phv~~G~-~DTn~~Lre~Tlksm~~La~kL~~~~Ln~Ellr~~ar~q~d~~~~irtntticlgki~ 436 (690)
T KOG1243|consen 358 IDHLTKQILNDQIFPHVALGF-LDTNATLREQTLKSMAVLAPKLSKRNLNGELLRYLARLQPDEHGGIRTNTTICLGKIA 436 (690)
T ss_pred hhhcCHHhhcchhHHHHHhhc-ccCCHHHHHHHHHHHHHHHhhhchhhhcHHHHHHHHhhCccccCcccccceeeecccc
Confidence 999999999999999999988 6999999999999999999999999888899999988766888888877766665555
Q ss_pred hccCHHHHHHhHhhh-hhhcccCCChhhHHHH
Q psy3914 542 QYFLLSEVAQRILPA-LCQLSTDPEKSVRDSA 572 (852)
Q Consensus 542 ~~~~~~~~a~~ILP~-L~~l~~D~~~~Vr~~a 572 (852)
.+..+.. -..||+. ....+-||-..-|-++
T Consensus 437 ~~l~~~~-R~~vL~~aftralkdpf~paR~a~ 467 (690)
T KOG1243|consen 437 PHLAASV-RKRVLASAFTRALKDPFVPARKAG 467 (690)
T ss_pred cccchhh-hccccchhhhhhhcCCCCCchhhh
Confidence 5554433 2233332 2234666666666543
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.67 E-value=6.3e-07 Score=98.63 Aligned_cols=232 Identities=13% Similarity=0.134 Sum_probs=151.4
Q ss_pred eEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEee----eEEcC-CC
Q psy3914 57 EVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLD----SVESP-SK 131 (852)
Q Consensus 57 ~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d----~~e~~-~~ 131 (852)
..+..+| +|+-+.+|..-.. ..++-|++....-....+.-..+.+.=.||-+-.=+- ..... ..
T Consensus 14 ~~gr~Lg--------qGgea~ly~l~e~---~d~VAKIYh~Pppa~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~ 82 (637)
T COG4248 14 PPGRPLG--------QGGEADLYTLGEV---RDQVAKIYHAPPPAAQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRG 82 (637)
T ss_pred CCCcccc--------CCccceeeecchh---hchhheeecCCCchHHHHHHHHhccCCCCcchhhhhcccHHHhhCCCcc
Confidence 3466666 7888888865332 2244588887332222222222333335665433111 11100 11
Q ss_pred CeEEEEEeecc---cHHHHHH--hhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 132 SLVYLAVEYVE---PIFYHLD--NTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 132 ~~~yIVtE~v~---~L~~~L~--~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
..+.|.|..+. ++..++. .+...-.......+.+....|+.+..-|| ..|.+-||++++|++|++++.+.|.|=
T Consensus 83 ~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH-~~Gh~vGDVn~~~~lVsd~~~V~LVds 161 (637)
T COG4248 83 KVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH-EHGHVVGDVNQNSFLVSDDSKVVLVDS 161 (637)
T ss_pred ceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH-hcCCcccccCccceeeecCceEEEEcc
Confidence 34888998887 5555553 11222345677888999999999999999 899999999999999999999999985
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccc-----cCCCCCcchhHHhHHHHHHHHHhC-CCCCCCCccc-------c
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENS-----LSHVTKCSTDMYGLGILIWEVFNG-PLQSTNRKSL-------S 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-----~~~~~~~~sDIwSLG~ll~el~tG-~~pf~~~~~l-------~ 273 (852)
+.-. +. .. ...+-.-+|.+.|.+||.. .+..-+...|.|+||++||+++.| ++||.|-... +
T Consensus 162 Dsfq-i~-~n---g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E 236 (637)
T COG4248 162 DSFQ-IN-AN---GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLE 236 (637)
T ss_pred ccee-ec-cC---CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcch
Confidence 4321 11 11 1122245678899999984 355566789999999999999886 8998643110 0
Q ss_pred -------------------------CcCCCChhHHHHHHHhccC--CCCCCCCHHHHHH
Q psy3914 274 -------------------------NIDNIPENLKRVYLELISE--RPNQRPNPADFIM 305 (852)
Q Consensus 274 -------------------------~~~~ip~~L~~li~~lL~~--nP~~Rps~~elL~ 305 (852)
.+.-+|++++.++.+|+.. ++.-|||++.-+.
T Consensus 237 ~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~a 295 (637)
T COG4248 237 TDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVA 295 (637)
T ss_pred hhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHH
Confidence 0245688999999999864 4678999876544
|
|
| >KOG0211|consensus | Back alignment and domain information |
|---|
Probab=98.61 E-value=8.7e-08 Score=114.86 Aligned_cols=255 Identities=16% Similarity=0.166 Sum_probs=204.6
Q ss_pred HhHHHHhhhhhhccCCcccccccchhhhHhhhhcCCCcc--cchhhhhh-hcccCChhhhhcchhhhhhhccccCCHHHH
Q psy3914 336 KNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGA--SVLSPLFK-IGQMLEHEDYQAKIVPCVVKLFGSNDRATR 412 (852)
Q Consensus 336 K~~Ff~~L~~~l~~fP~~~~~~kiLP~Ll~~~e~~~~~~--~vL~~llk-i~~~l~~~ef~~~i~P~i~~LF~~~dr~iR 412 (852)
+......|...+...|+.-....+.|.+-..... +-.. ...-.+|. ....++++.-...+.|....+...-.+.+|
T Consensus 176 r~k~ve~l~~v~~~~~~~~~~~~lv~l~~~l~~~-d~~~sr~sacglf~~~~~~~~~~~vk~elr~~~~~lc~d~~~~Vr 254 (759)
T KOG0211|consen 176 REKAVESLLKVAVGLPKEKLREHLVPLLKRLATG-DWFQSRLSACGLFGKLYVSLPDDAVKRELRPIVQSLCQDDTPMVR 254 (759)
T ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHccch-hhhhcchhhhhhhHHhccCCChHHHHHHHHHHHHhhccccchhhH
Confidence 5566667777777777776655556655433222 1111 11112332 223444455566777777777777888999
Q ss_pred HHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCcc-chhhhHHHHHHHHhccCCCccee
Q psy3914 413 SRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYN-NLNVETLRHFARLQAKDDQGGIR 491 (852)
Q Consensus 413 ~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~-~l~~~lL~~l~kl~~~D~~~~IR 491 (852)
.++-+++..+++.+..+.+.+.+.|.+.....|..+.||++++.++..+.+.++.. .+.+.+++.+.... +|..++||
T Consensus 255 ~~~a~~l~~~a~~~~~~~~~s~v~~~~~~L~~DdqdsVr~~a~~~~~~l~~l~~~~~d~~~~~~~~l~~~~-~d~~~~v~ 333 (759)
T KOG0211|consen 255 RAVASNLGNIAKVLESEIVKSEVLPTLIQLLRDDQDSVREAAVESLVSLLDLLDDDDDVVKSLTESLVQAV-EDGSWRVS 333 (759)
T ss_pred HHHHhhhHHHHHHHHHHHHHhhccHHHhhhhhcchhhHHHHHHHHHHHHHHhcCCchhhhhhhhHHHHHHh-cChhHHHH
Confidence 99999999999999999999999999999999999999999999999999999988 77777888888777 69999999
Q ss_pred eehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccC----HHHHHHhHhhhhhhcccCCChh
Q psy3914 492 TNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFL----LSEVAQRILPALCQLSTDPEKS 567 (852)
Q Consensus 492 ~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~----~~~~a~~ILP~L~~l~~D~~~~ 567 (852)
.++..-+..+...++++...-.+.++|...++|.....|.|.......++.+++ ++..-+.|||.+..+..|.+.+
T Consensus 334 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~~~~~e~r~a~a~~~~~l~~~l~~~~~~~i~~~~ilp~~~~lv~d~~~~ 413 (759)
T KOG0211|consen 334 YMVADKFSELSSAVGPSATRTQLVPPVSNLLKDEEWEVRYAIAKKVQKLACYLNASCYPNIPDSSILPEVQVLVLDNALH 413 (759)
T ss_pred HHHhhhhhhHHHHhccccCcccchhhHHHHhcchhhhhhHHhhcchHHHhhhcCcccccccchhhhhHHHHHHHhcccch
Confidence 999999999999999965555679999999999999999999999999999988 6778889999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhccCCCc
Q psy3914 568 VRDSAFKTIKGFLGKLEQVSENPSL 592 (852)
Q Consensus 568 Vr~~a~~~i~~~l~~le~~~~~~~~ 592 (852)
||......+......+.++....++
T Consensus 414 vr~a~a~~~~~~~p~~~k~~ti~~l 438 (759)
T KOG0211|consen 414 VRSALASVITGLSPILPKERTISEL 438 (759)
T ss_pred HHHHHhccccccCccCCcCcCcccc
Confidence 9998888888777777766544333
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.4e-07 Score=94.62 Aligned_cols=120 Identities=14% Similarity=0.091 Sum_probs=80.5
Q ss_pred EEEEEEEcCCCeEEEEEEEeC---------------CC-------------chHHHHHHHHHHHhCCCC--CcceEeeeE
Q psy3914 77 KFHGGKKKGSNEKVTIFLNDS---------------AD-------------TYEPALSYVKKLKTLRHP--SILTFLDSV 126 (852)
Q Consensus 77 ~Vy~a~~k~~g~~VaVKv~~~---------------~~-------------~~~~~~~E~~~Lk~LrHP--nIlk~~d~~ 126 (852)
.||.|... +|..|+||++.. .. ....+++|++.|..+..- ++.+++++.
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 48899884 678999999876 00 123678999999999865 467776553
Q ss_pred EcCCCCeEEEEEeecc----cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHH-HHhcCCceecccCCCCEEEccCCcE
Q psy3914 127 ESPSKSLVYLAVEYVE----PIFYHLDNTLKENNEKKQIYISWGIFQITRALSF-LINDADLRHNHVNHTSIFINSCGEW 201 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~----~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~f-LH~~~~ivH~DIkp~NIlV~~~g~~ 201 (852)
. .+|||||+. ++..+.. . .++......++.+++..+.. +| .+|++||||++.||+++.+ .+
T Consensus 80 --~----~~ivME~I~~~G~~~~~l~~-~-----~~~~~~~~~~~~~il~~~~~~~~-~~givHGDLs~~NIlv~~~-~~ 145 (188)
T PF01163_consen 80 --R----NVIVMEYIGEDGVPLPRLKD-V-----DLSPEEPKELLEEILEEIIKMLH-KAGIVHGDLSEYNILVDDG-KV 145 (188)
T ss_dssp --T----TEEEEE--EETTEEGGCHHH-C-----GGGGSTHHHHHHHHHHHHHHHHH-CTTEEESS-STTSEEEETT-CE
T ss_pred --C----CEEEEEecCCCccchhhHHh-c-----cccchhHHHHHHHHHHHHHHHHH-hcCceecCCChhhEEeecc-eE
Confidence 2 469999998 2444331 1 11133456677788885555 57 9999999999999999877 89
Q ss_pred EEcccchhhc
Q psy3914 202 KLGGLEYMEK 211 (852)
Q Consensus 202 KL~DFg~a~~ 211 (852)
.|+|||.+..
T Consensus 146 ~iIDf~qav~ 155 (188)
T PF01163_consen 146 YIIDFGQAVD 155 (188)
T ss_dssp EE--GTTEEE
T ss_pred EEEecCccee
Confidence 9999999763
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG3087|consensus | Back alignment and domain information |
|---|
Probab=98.55 E-value=5e-07 Score=90.02 Aligned_cols=132 Identities=15% Similarity=0.059 Sum_probs=96.0
Q ss_pred cCCceEEEEEEEcCCCeEEEEEE-EeC---------CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeec
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFL-NDS---------ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYV 141 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv-~~~---------~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v 141 (852)
+|.=+.|+++.. .|+.+.||. |.+ .-.....++|.+.|.+++--+|.--.=++.+. ..-+|+|||+
T Consensus 17 QGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~--~~~~i~ME~~ 92 (229)
T KOG3087|consen 17 QGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDT--YGGQIYMEFI 92 (229)
T ss_pred ccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEec--CCCeEEEEec
Confidence 777788998887 688888884 444 11234567888988888754554433334444 4567889999
Q ss_pred c---cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc-E--EEcccchhh
Q psy3914 142 E---PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE-W--KLGGLEYME 210 (852)
Q Consensus 142 ~---~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~-~--KL~DFg~a~ 210 (852)
. .+.+++..... ....+.-....+.+|-+.+.-|| ..++|||||..+||++.++|. | .|+|||++.
T Consensus 93 ~g~~~vk~~i~~~~~--~~~~d~~~~~~~~~iG~~igklH-~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 93 DGASTVKDFILSTME--DESEDEGLAELARRIGELIGKLH-DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred cchhHHHHHHHHHcc--CcccchhHHHHHHHHHHHHHHhh-hCCeecccccccceEEecCCCcCceEEEeecchh
Confidence 8 47777754332 23333444788899999999999 999999999999999987654 4 899999975
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.7e-07 Score=93.09 Aligned_cols=133 Identities=11% Similarity=-0.009 Sum_probs=91.5
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCC---chHHHHHHHHHHHhCCC--CCcceEeeeEEcCC-CCeEEEEEeecc--c
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSAD---TYEPALSYVKKLKTLRH--PSILTFLDSVESPS-KSLVYLAVEYVE--P 143 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrH--PnIlk~~d~~e~~~-~~~~yIVtE~v~--~ 143 (852)
.|....+|+++.. +|..+++|+..... ....+.+|++.++.+++ .++.+++.+..... .+..|+||||+. +
T Consensus 8 ~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~ 86 (223)
T cd05154 8 GGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRV 86 (223)
T ss_pred CCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEe
Confidence 6788899999874 36789999877622 35678999999999976 44677777765431 125789999998 3
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHh--------------------------------------------
Q psy3914 144 IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLIN-------------------------------------------- 179 (852)
Q Consensus 144 L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~-------------------------------------------- 179 (852)
|...+. ...++......++.+++.+|..||+
T Consensus 87 l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (223)
T cd05154 87 LRDRLL-----RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLL 161 (223)
T ss_pred cCCCCC-----CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence 433220 0123444444445555555555551
Q ss_pred -----------cCCceecccCCCCEEEcc--CCcEEEcccchhh
Q psy3914 180 -----------DADLRHNHVNHTSIFINS--CGEWKLGGLEYME 210 (852)
Q Consensus 180 -----------~~~ivH~DIkp~NIlV~~--~g~~KL~DFg~a~ 210 (852)
...++|||++|.||+++. ++.+.|+||+.+.
T Consensus 162 ~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 162 RWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 234699999999999998 6678999999975
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.9e-06 Score=92.92 Aligned_cols=129 Identities=9% Similarity=-0.030 Sum_probs=91.9
Q ss_pred EEEEEEEcCCCeEEEEEEEeCCCc-------------hHHHHHHHHHHHhCCCCCc--ceEeeeEEcCC---CCeEEEEE
Q psy3914 77 KFHGGKKKGSNEKVTIFLNDSADT-------------YEPALSYVKKLKTLRHPSI--LTFLDSVESPS---KSLVYLAV 138 (852)
Q Consensus 77 ~Vy~a~~k~~g~~VaVKv~~~~~~-------------~~~~~~E~~~Lk~LrHPnI--lk~~d~~e~~~---~~~~yIVt 138 (852)
.|+++.. .|+.|.||.+..... ...+.+|++.+..|..-+| +..+.+.+... ...-||||
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 3556544 677899997754211 1137788888888853333 33344444311 13578999
Q ss_pred eecc---cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc-------CCcEEEcccch
Q psy3914 139 EYVE---PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS-------CGEWKLGGLEY 208 (852)
Q Consensus 139 E~v~---~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~-------~g~~KL~DFg~ 208 (852)
|++. +|.+++.... ....+......++.+|+..+.-|| +.|++|+|+++.||+++. ++.+.|+||+.
T Consensus 115 e~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH-~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r 191 (268)
T PRK15123 115 EDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMH-AAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHR 191 (268)
T ss_pred eeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHH-HCcCccCCCChhhEEEeccccCCCCCceEEEEECCc
Confidence 9998 5888874322 134556677789999999999999 999999999999999975 46789999998
Q ss_pred hh
Q psy3914 209 ME 210 (852)
Q Consensus 209 a~ 210 (852)
+.
T Consensus 192 ~~ 193 (268)
T PRK15123 192 AQ 193 (268)
T ss_pred cc
Confidence 75
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.3e-06 Score=87.68 Aligned_cols=134 Identities=15% Similarity=0.032 Sum_probs=93.0
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC---------CCchHHHHHHHHHHHhCCC--CCcceEeeeEEcCC--CCeEEEEE
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS---------ADTYEPALSYVKKLKTLRH--PSILTFLDSVESPS--KSLVYLAV 138 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~---------~~~~~~~~~E~~~Lk~LrH--PnIlk~~d~~e~~~--~~~~yIVt 138 (852)
.|+.|.+........++.+-+|.+-. ......+.+|+..+..|+. =.+.+.+.+.+... ....||||
T Consensus 17 R~~~~~~~~~~~~~~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lit 96 (206)
T PF06293_consen 17 RRGGWFGVQRVVDLVGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLIT 96 (206)
T ss_pred CceEEEEEEccccccceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEE
Confidence 34444443333223455666664322 1234568888888877753 23555666665531 12468999
Q ss_pred eecc---cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC---cEEEcccchhh
Q psy3914 139 EYVE---PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG---EWKLGGLEYME 210 (852)
Q Consensus 139 E~v~---~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g---~~KL~DFg~a~ 210 (852)
|++. +|.+++... ...+......++.+++..+.-|| ..|++|+|+++.||||+.++ .+.|+||+-++
T Consensus 97 e~l~~~~~L~~~~~~~----~~~~~~~~~~ll~~l~~~i~~lH-~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~ 169 (206)
T PF06293_consen 97 EALPGAQDLRDLLQQW----EQLDPSQRRELLRALARLIAKLH-DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMR 169 (206)
T ss_pred EeCCCcccHHHHHHhh----cccchhhHHHHHHHHHHHHHHHH-HCcCCCCCCCcccEEEeCCCCceeEEEEcchhce
Confidence 9997 588888432 12566677889999999999999 99999999999999999987 79999999876
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.39 E-value=2e-06 Score=86.14 Aligned_cols=120 Identities=12% Similarity=0.009 Sum_probs=86.2
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEe-C---------CCchHHHHHHHHHHHhCCCCCc--ceEeeeEEcCCCCeEEEEEe
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLND-S---------ADTYEPALSYVKKLKTLRHPSI--LTFLDSVESPSKSLVYLAVE 139 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~-~---------~~~~~~~~~E~~~Lk~LrHPnI--lk~~d~~e~~~~~~~yIVtE 139 (852)
+|.=..+|.+.. -|.+|.+|.=- + .-.....++|+++|.+++--+| ..++++.. ....|+||
T Consensus 6 ~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~----~~~~I~me 79 (204)
T COG3642 6 QGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDP----DNGLIVME 79 (204)
T ss_pred CCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcC----CCCEEEEE
Confidence 677788888855 34456666432 2 1123456788999998875444 34444443 45789999
Q ss_pred ecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 140 YVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 140 ~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
|+. .|.++|... ...++..+-.-+.-|| .+||+||||.++||.+...+ +.++|||++.
T Consensus 80 ~I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH-~~givHGDLTtsNiIl~~~~-i~~IDfGLg~ 139 (204)
T COG3642 80 YIEGELLKDALEEA-----------RPDLLREVGRLVGKLH-KAGIVHGDLTTSNIILSGGR-IYFIDFGLGE 139 (204)
T ss_pred EeCChhHHHHHHhc-----------chHHHHHHHHHHHHHH-hcCeecCCCccceEEEeCCc-EEEEECCccc
Confidence 999 577777321 1456678888899999 99999999999999996655 9999999975
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.1e-06 Score=92.66 Aligned_cols=130 Identities=10% Similarity=0.004 Sum_probs=97.0
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC------------------------CCchHHHHHHHHHH
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS------------------------ADTYEPALSYVKKL 111 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~------------------------~~~~~~~~~E~~~L 111 (852)
+.+|.+|| .|-=+.||.|... .|.+++||.-.. .-....+++|++.|
T Consensus 93 e~iG~~IG--------vGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L 163 (304)
T COG0478 93 EAIGTKIG--------VGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEAL 163 (304)
T ss_pred Hhhccccc--------cCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHH
Confidence 44567777 7888999999987 678999996543 01224678999999
Q ss_pred HhCCCC--CcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecc
Q psy3914 112 KTLRHP--SILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNH 187 (852)
Q Consensus 112 k~LrHP--nIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~D 187 (852)
..|.-- .|.+.++. +...+|||++. +|... .++......++..|++-+.-+- .+|+||||
T Consensus 164 ~~L~~~G~~VP~P~~~------nRHaVvMe~ieG~eL~~~---------r~~~en~~~il~~il~~~~~~~-~~GiVHGD 227 (304)
T COG0478 164 QRLYPEGVKVPKPIAW------NRHAVVMEYIEGVELYRL---------RLDVENPDEILDKILEEVRKAY-RRGIVHGD 227 (304)
T ss_pred HHhhhcCCCCCCcccc------ccceeeeehcccceeecc---------cCcccCHHHHHHHHHHHHHHHH-HcCccccC
Confidence 998754 66666654 55789999998 44322 1134445555666666666666 79999999
Q ss_pred cCCCCEEEccCCcEEEcccchhh
Q psy3914 188 VNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 188 Ikp~NIlV~~~g~~KL~DFg~a~ 210 (852)
+++-||+|+++|.+.++||-.+.
T Consensus 228 lSefNIlV~~dg~~~vIDwPQ~v 250 (304)
T COG0478 228 LSEFNILVTEDGDIVVIDWPQAV 250 (304)
T ss_pred CchheEEEecCCCEEEEeCcccc
Confidence 99999999999999999998865
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.8e-06 Score=102.73 Aligned_cols=170 Identities=16% Similarity=0.205 Sum_probs=134.5
Q ss_pred CCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhc------ccCCccchhhhHHHHHHH
Q psy3914 407 NDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLA------PKLNYNNLNVETLRHFAR 480 (852)
Q Consensus 407 ~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~------~kl~~~~l~~~lL~~l~k 480 (852)
..+..++..|+-|-.+...++.+...|.|+|.+++.++|..+.||.+++..+..+. +..+....-..|+|+|..
T Consensus 435 k~~~tK~~ALeLl~~lS~~i~de~~LDRVlPY~v~l~~Ds~a~Vra~Al~Tlt~~L~~Vr~~~~~daniF~eYlfP~L~~ 514 (1431)
T KOG1240|consen 435 KTIQTKLAALELLQELSTYIDDEVKLDRVLPYFVHLLMDSEADVRATALETLTELLALVRDIPPSDANIFPEYLFPHLNH 514 (1431)
T ss_pred hcchhHHHHHHHHHHHhhhcchHHHHhhhHHHHHHHhcCchHHHHHHHHHHHHHHHhhccCCCcccchhhHhhhhhhhHh
Confidence 34455667777777788889999999999999999999999999999988877663 334455566779999999
Q ss_pred HhccC-CCcceeeehhhhhcccccccCh------h---------------------h-HH---HHHHHHHHhhccCCChH
Q psy3914 481 LQAKD-DQGGIRTNTTVCVGKIAHHLHP------Q---------------------I-RQ---KVLISAFSRAMRDPFPP 528 (852)
Q Consensus 481 l~~~D-~~~~IR~nt~iclgkia~~L~~------~---------------------~-~~---~vLi~af~r~lkDp~~~ 528 (852)
+.. | ..-.||..-+-||+++|..-.. + + .+ ..+-..+..+|-|+.+.
T Consensus 515 l~~-d~~~~~vRiayAsnla~LA~tA~rFle~~q~~~~~g~~n~~nset~~~~~~~~~~~~L~~~V~~~v~sLlsd~~~~ 593 (1431)
T KOG1240|consen 515 LLN-DSSAQIVRIAYASNLAQLAKTAYRFLELTQELRQAGMLNDPNSETAPEQNYNTELQALHHTVEQMVSSLLSDSPPI 593 (1431)
T ss_pred hhc-cCccceehhhHHhhHHHHHHHHHHHHHHHHHHHhcccccCcccccccccccchHHHHHHHHHHHHHHHHHcCCchH
Confidence 984 7 7778999999999999862110 0 0 01 11123455678999999
Q ss_pred HHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHH
Q psy3914 529 ARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIK 577 (852)
Q Consensus 529 ~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~ 577 (852)
+|.+-+..+.-++.+|+.+.--.-||+.|+..|.|+++.+|-+.|+.|-
T Consensus 594 Vkr~Lle~i~~LC~FFGk~ksND~iLshLiTfLNDkDw~LR~aFfdsI~ 642 (1431)
T KOG1240|consen 594 VKRALLESIIPLCVFFGKEKSNDVILSHLITFLNDKDWRLRGAFFDSIV 642 (1431)
T ss_pred HHHHHHHHHHHHHHHhhhcccccchHHHHHHHhcCccHHHHHHHHhhcc
Confidence 9999999999999999987766779999999999999999999888765
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.9e-05 Score=81.62 Aligned_cols=133 Identities=11% Similarity=0.027 Sum_probs=97.6
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC--------CCchHHHHHHHHHHHhCCC--CCcceEeeeEEc---CCCCeEEEEE
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS--------ADTYEPALSYVKKLKTLRH--PSILTFLDSVES---PSKSLVYLAV 138 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~--------~~~~~~~~~E~~~Lk~LrH--PnIlk~~d~~e~---~~~~~~yIVt 138 (852)
.|+.+.|++... .|..+-||.-.. ..-...+.+|+..|..|.. -.+.+++ ++.. ...-.-+|||
T Consensus 28 rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 28 RNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 577777888665 344677776552 2345688999999988863 2255555 3321 1123478999
Q ss_pred eecc---cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc--EEEcccchhh
Q psy3914 139 EYVE---PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE--WKLGGLEYME 210 (852)
Q Consensus 139 E~v~---~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~--~KL~DFg~a~ 210 (852)
|-+. +|.+++.+. .-...+......++.+|+.+|.-|| +.|+.|+|+.+.||+++.+|. ++++||+-++
T Consensus 105 e~L~g~~~L~~~l~~~--~~~~~~~~~k~~il~~va~~ia~LH-~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 105 EDMAGFISIADWYAQH--AVSPYSDEVRQAMLKAVALAFKKMH-SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EeCCCCccHHHHHhcC--CcCCcchHHHHHHHHHHHHHHHHHH-HCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 9887 788887431 1134567777889999999999999 999999999999999987777 9999999876
|
|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=3.6e-05 Score=83.69 Aligned_cols=164 Identities=15% Similarity=0.161 Sum_probs=119.0
Q ss_pred cchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhh-cCCCcHHHHHHHHHHHHHhcccCCccchhh
Q psy3914 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALG-FLDTNPTIREQTVKSIIHLAPKLNYNNLNV 472 (852)
Q Consensus 394 ~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g-~~D~~~~iRe~tlksi~~l~~kl~~~~l~~ 472 (852)
..+++.+.+|+.+.|+.+|.....-|..+-..-. ....++|.|... ..|.++.||..++.++=.+...-... ..
T Consensus 53 ~~~~~~l~~ll~~~d~~vR~~A~~aLg~lg~~~~---~~~~a~~~L~~l~~~D~d~~VR~~A~~aLG~~~~~~~~~--~~ 127 (280)
T PRK09687 53 QDVFRLAIELCSSKNPIERDIGADILSQLGMAKR---CQDNVFNILNNLALEDKSACVRASAINATGHRCKKNPLY--SP 127 (280)
T ss_pred chHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCcc---chHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccccccc--ch
Confidence 5577888899999999999888877776543111 145678888766 68889999999999887765332211 12
Q ss_pred hHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHh
Q psy3914 473 ETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQR 552 (852)
Q Consensus 473 ~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ 552 (852)
.++..+..+. .|+++.||..++..||++.. ..-++++...++|+.+.+|..|+.+|..+ .+. ...
T Consensus 128 ~a~~~l~~~~-~D~~~~VR~~a~~aLg~~~~--------~~ai~~L~~~L~d~~~~VR~~A~~aLg~~--~~~----~~~ 192 (280)
T PRK09687 128 KIVEQSQITA-FDKSTNVRFAVAFALSVIND--------EAAIPLLINLLKDPNGDVRNWAAFALNSN--KYD----NPD 192 (280)
T ss_pred HHHHHHHHHh-hCCCHHHHHHHHHHHhccCC--------HHHHHHHHHHhcCCCHHHHHHHHHHHhcC--CCC----CHH
Confidence 3444444444 58899999999999987642 33567888889999999999999988766 221 125
Q ss_pred HhhhhhhcccCCChhhHHHHHHHHH
Q psy3914 553 ILPALCQLSTDPEKSVRDSAFKTIK 577 (852)
Q Consensus 553 ILP~L~~l~~D~~~~Vr~~a~~~i~ 577 (852)
++|.|..++.|++..||..|...+.
T Consensus 193 ~~~~L~~~L~D~~~~VR~~A~~aLg 217 (280)
T PRK09687 193 IREAFVAMLQDKNEEIRIEAIIGLA 217 (280)
T ss_pred HHHHHHHHhcCCChHHHHHHHHHHH
Confidence 6788888889999999988877665
|
|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=4.3e-05 Score=83.11 Aligned_cols=168 Identities=15% Similarity=0.136 Sum_probs=128.6
Q ss_pred hhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccch
Q psy3914 391 DYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNL 470 (852)
Q Consensus 391 ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l 470 (852)
.|.+.-.+.+.+++...|..+|...+..|..+- ...+++.+...+.|.++.+|..++..+-.|-..= +.
T Consensus 19 ~~~~~~~~~L~~~L~d~d~~vR~~A~~aL~~~~--------~~~~~~~l~~ll~~~d~~vR~~A~~aLg~lg~~~--~~- 87 (280)
T PRK09687 19 QCKKLNDDELFRLLDDHNSLKRISSIRVLQLRG--------GQDVFRLAIELCSSKNPIERDIGADILSQLGMAK--RC- 87 (280)
T ss_pred HHhhccHHHHHHHHhCCCHHHHHHHHHHHHhcC--------cchHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCc--cc-
Confidence 455666777888889999999988887776552 3667888888899999999999999887654211 11
Q ss_pred hhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHH
Q psy3914 471 NVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVA 550 (852)
Q Consensus 471 ~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a 550 (852)
..+.++.|..+..+|+++.||..++..||.+...-... ..-++..+...+.|+...+|.+++.+|..+. .
T Consensus 88 ~~~a~~~L~~l~~~D~d~~VR~~A~~aLG~~~~~~~~~--~~~a~~~l~~~~~D~~~~VR~~a~~aLg~~~--------~ 157 (280)
T PRK09687 88 QDNVFNILNNLALEDKSACVRASAINATGHRCKKNPLY--SPKIVEQSQITAFDKSTNVRFAVAFALSVIN--------D 157 (280)
T ss_pred hHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccccccc--chHHHHHHHHHhhCCCHHHHHHHHHHHhccC--------C
Confidence 34677888777558999999999999999986543211 1224456677899999999999999995332 2
Q ss_pred HhHhhhhhhcccCCChhhHHHHHHHHHHH
Q psy3914 551 QRILPALCQLSTDPEKSVRDSAFKTIKGF 579 (852)
Q Consensus 551 ~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~ 579 (852)
...+|.|+.++.|++..||..|...+..+
T Consensus 158 ~~ai~~L~~~L~d~~~~VR~~A~~aLg~~ 186 (280)
T PRK09687 158 EAAIPLLINLLKDPNGDVRNWAAFALNSN 186 (280)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhcC
Confidence 45789999999999999999998887754
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.5e-05 Score=93.13 Aligned_cols=136 Identities=13% Similarity=0.088 Sum_probs=85.8
Q ss_pred ccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchH-------------------------------------
Q psy3914 60 EPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYE------------------------------------- 102 (852)
Q Consensus 60 e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~------------------------------------- 102 (852)
++++ .++++.||.|+.+ +|+.|+||+... ...+
T Consensus 131 ~PiA--------sASIaQVH~A~L~-sG~~VAVKVqrP-gi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~ 200 (517)
T COG0661 131 EPIA--------SASIAQVHRAVLK-SGEEVAVKVQRP-GIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEK 200 (517)
T ss_pred Cchh--------hhhHhhheeEEec-CCCEEEEEecCC-ChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHH
Confidence 5777 8999999999997 499999999987 1111
Q ss_pred ------HHHHHHHHHHhCC----CCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHH
Q psy3914 103 ------PALSYVKKLKTLR----HPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQI 170 (852)
Q Consensus 103 ------~~~~E~~~Lk~Lr----HPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI 170 (852)
.+.+|...+.+++ +..-+++=.++.+-+ +.-.++|||+. ++.+... . .. ...+...+..-+.++
T Consensus 201 ~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t-~~~VLtmE~i~Gi~i~d~~~-l-~~-~g~d~k~ia~~~~~~ 276 (517)
T COG0661 201 RLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYT-TRRVLTMEWIDGIKISDIAA-L-KS-AGIDRKELAELLVRA 276 (517)
T ss_pred HHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhcc-CCcEEEEEeeCCEecccHHH-H-Hh-cCCCHHHHHHHHHHH
Confidence 1223333333332 222223333332211 45789999999 6776631 1 11 344544444433333
Q ss_pred HHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhcc
Q psy3914 171 TRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKI 212 (852)
Q Consensus 171 ~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~ 212 (852)
.----| ..|+.|+|.+|.||+|+.+|.+.+.|||++..+
T Consensus 277 f~~q~~---~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l 315 (517)
T COG0661 277 FLRQLL---RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRL 315 (517)
T ss_pred HHHHHH---hcCccccCCCccceEEecCCcEEEEcCcceecC
Confidence 322222 359999999999999999999999999998643
|
|
| >KOG1235|consensus | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0001 Score=86.08 Aligned_cols=132 Identities=17% Similarity=0.141 Sum_probs=90.6
Q ss_pred ccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----------------------------------------
Q psy3914 60 EPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----------------------------------------- 98 (852)
Q Consensus 60 e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----------------------------------------- 98 (852)
++|+ ..+++.||+|+.+. |+.|+||+-+..
T Consensus 167 ~pia--------aASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ 237 (538)
T KOG1235|consen 167 EPIA--------AASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQ 237 (538)
T ss_pred chhh--------hcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHh
Confidence 5777 78999999999985 999999998770
Q ss_pred --CchHHHHHHHHHHHhCCCCC------cceEeeeEEcCCCCeEEEEEeecc--cHH--HHHHhhhhcCCCCCHHHHHHH
Q psy3914 99 --DTYEPALSYVKKLKTLRHPS------ILTFLDSVESPSKSLVYLAVEYVE--PIF--YHLDNTLKENNEKKQIYISWG 166 (852)
Q Consensus 99 --~~~~~~~~E~~~Lk~LrHPn------Ilk~~d~~e~~~~~~~yIVtE~v~--~L~--~~L~~~~~~~~~l~e~~i~~~ 166 (852)
+....++|.-+..+.++|-+ |.+++-.+. +.-.++||||. ++. +.|.+ ..++...+..-
T Consensus 238 ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~s----t~RVLtME~~~G~~i~Dl~~i~~-----~gi~~~~i~~~ 308 (538)
T KOG1235|consen 238 ELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLS----TKRVLTMEYVDGIKINDLDAIDK-----RGISPHDILNK 308 (538)
T ss_pred hcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcC----cceEEEEEecCCccCCCHHHHHH-----cCCCHHHHHHH
Confidence 11122333344455556666 555554443 34889999998 333 33322 45666666655
Q ss_pred HHHHHHHHHHHHhcCCceecccCCCCEEEcc----CCcEEEcccchhhcc
Q psy3914 167 IFQITRALSFLINDADLRHNHVNHTSIFINS----CGEWKLGGLEYMEKI 212 (852)
Q Consensus 167 l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~----~g~~KL~DFg~a~~~ 212 (852)
+.+...-.-|-| |++|+|-+|.||+|+. ++++.|-|||+...+
T Consensus 309 l~~~~~~qIf~~---GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i 355 (538)
T KOG1235|consen 309 LVEAYLEQIFKT---GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI 355 (538)
T ss_pred HHHHHHHHHHhc---CCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence 555554444444 7999999999999994 677999999997643
|
|
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.86 E-value=4.3e-05 Score=80.22 Aligned_cols=169 Identities=14% Similarity=0.095 Sum_probs=110.5
Q ss_pred CCCchhhhhhHhhhhhccCCccccccccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-
Q psy3914 20 NIDDDKALTSEVVDIRLSSSPKMWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA- 98 (852)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~m~~~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~- 98 (852)
.-.++.+....|.|....+. ...++++ +.|.+..| +. .+|--.+||.|.. .++..|+||+|...
T Consensus 20 Kd~~~~k~~~~v~D~~t~~~--l~~L~~r-------g~i~~~~g----~i-stGKEA~Vy~a~~-~~~~~~avKiyr~~t 84 (268)
T COG1718 20 KDKEDRKVVDEVFDKRTLET--LRRLLSR-------GVITELVG----CI-STGKEANVYLAET-GDGRYVAVKIYRTST 84 (268)
T ss_pred hcchHhhhhhhhhhhHHHHH--HHHHhcC-------CceeeeEe----ee-cCCcceEEEeecc-CCCceEEEEEEehhh
Confidence 44555666677777665533 3344454 23333333 11 2788899999987 46889999999770
Q ss_pred -------------------------CchHHHHHHHHHHHhCC--CCCcceEeeeEEcCCCCeEEEEEeecccHHHHHHhh
Q psy3914 99 -------------------------DTYEPALSYVKKLKTLR--HPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNT 151 (852)
Q Consensus 99 -------------------------~~~~~~~~E~~~Lk~Lr--HPnIlk~~d~~e~~~~~~~yIVtE~v~~L~~~L~~~ 151 (852)
.......+|++.|+++. +-.+.+-+.+.. -.+||||+..=. ...-
T Consensus 85 ~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~Pi~~~~------nVLvMEfIg~~g--~pAP 156 (268)
T COG1718 85 SEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPEPIAFRN------NVLVMEFIGDDG--LPAP 156 (268)
T ss_pred hhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCCceeecC------CeEEEEeccCCC--CCCC
Confidence 01224578888888885 444555555443 468999998100 0000
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhcc
Q psy3914 152 LKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKI 212 (852)
Q Consensus 152 ~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~ 212 (852)
.-.+..+...+...+..++++.+.-|-..+++||+||+.=||++. +|.+.++||+-+...
T Consensus 157 ~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 157 RLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred CcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeEEEEECcccccc
Confidence 001122333356666778889999888459999999999999998 889999999998643
|
|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00028 Score=74.11 Aligned_cols=180 Identities=17% Similarity=0.202 Sum_probs=126.1
Q ss_pred ccCCHHHHHHHHHHHHHHHccC----ChHHHhH---hHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccc--hhhhHH
Q psy3914 405 GSNDRATRSRLLLQLEHFIGHV----PDAIVNE---QIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNN--LNVETL 475 (852)
Q Consensus 405 ~~~dr~iR~~LL~~L~~~~~~l----~~~~v~~---~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~--l~~~lL 475 (852)
...|-..|...|+.|..++..- ....+.+ .+++.+...+.|....|-..++..+..++..+.... .-..++
T Consensus 17 ~~~~W~~r~~al~~L~~l~~~~~~~~~~~~~~~~l~~~~~~i~~~l~d~Rs~v~~~A~~~l~~l~~~l~~~~~~~~~~~l 96 (228)
T PF12348_consen 17 SESDWEERVEALQKLRSLIKGNAPEDFPPDFVECLRQLLDAIIKQLSDLRSKVSKTACQLLSDLARQLGSHFEPYADILL 96 (228)
T ss_dssp T-SSHHHHHHHHHHHHHHHHH-B-----HHHHHHHH---HHHHH-S-HH---HHHHHHHHHHHHHHHHGGGGHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHHHHcCCccccHHHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHH
Confidence 6678888999999999887776 1222222 344778888999988898899988888888887652 224578
Q ss_pred HHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccC-------HHH
Q psy3914 476 RHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFL-------LSE 548 (852)
Q Consensus 476 ~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~-------~~~ 548 (852)
|.|.+.. .|....||..+.-||..|..+.+ .-.+++.+.+...+++..+.+|..++..+..+.+.++ ...
T Consensus 97 ~~Ll~~~-~~~~~~i~~~a~~~L~~i~~~~~--~~~~~~~~~l~~~~~~Kn~~vR~~~~~~l~~~l~~~~~~~~~l~~~~ 173 (228)
T PF12348_consen 97 PPLLKKL-GDSKKFIREAANNALDAIIESCS--YSPKILLEILSQGLKSKNPQVREECAEWLAIILEKWGSDSSVLQKSA 173 (228)
T ss_dssp HHHHHGG-G---HHHHHHHHHHHHHHHTTS---H--HHHHHHHHHHTT-S-HHHHHHHHHHHHHHHTT-----GGG--HH
T ss_pred HHHHHHH-ccccHHHHHHHHHHHHHHHHHCC--cHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHccchHhhhcccc
Confidence 8887777 47778899999999999999987 2234556677778999999999999998888777766 223
Q ss_pred HHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhhhc
Q psy3914 549 VAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQVS 587 (852)
Q Consensus 549 ~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~~~ 587 (852)
....++|.|..++.|++..||+.|.+++..|......-+
T Consensus 174 ~~~~l~~~l~~~l~D~~~~VR~~Ar~~~~~l~~~~~~~a 212 (228)
T PF12348_consen 174 FLKQLVKALVKLLSDADPEVREAARECLWALYSHFPERA 212 (228)
T ss_dssp HHHHHHHHHHHHHTSS-HHHHHHHHHHHHHHHHHH-HHH
T ss_pred hHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHhh
Confidence 347899999999999999999999999999988877654
|
The domain is also found in other proteins involved in microtubule binding, including STU1, MOR1 and spindle pole body component Alp14.; PDB: 2QK2_A. |
| >KOG2137|consensus | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00027 Score=82.95 Aligned_cols=197 Identities=14% Similarity=0.209 Sum_probs=151.0
Q ss_pred hhhhhcchhhhhhhc--cccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCC
Q psy3914 389 HEDYQAKIVPCVVKL--FGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLN 466 (852)
Q Consensus 389 ~~ef~~~i~P~i~~L--F~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~ 466 (852)
..-|+.--++.|..| +.-.|..++..+++.|..+++.++..+...+|+|.|+.-+.+ ..+.--++--+..|+.-++
T Consensus 265 ~~ff~D~~~~aLrfLD~l~~kdn~qKs~Flk~Ls~~ip~fp~rv~~~kiLP~L~~el~n--~~~vp~~LP~v~~i~~~~s 342 (700)
T KOG2137|consen 265 IPFFSDPGLKALRFLDDLPQKDNSQKSSFLKGLSKLIPTFPARVLFQKILPTLVAELVN--TKMVPIVLPLVLLIAEGLS 342 (700)
T ss_pred ccccCCchhhhhhhcccccccCcHHHHHHHHHHHHhhccCCHHHHHHhhhhHHHHHhcc--ccccccccchhhhhhhccc
Confidence 344555556666655 333688899999999999999999999999999999998853 3333444555667777788
Q ss_pred ccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCH
Q psy3914 467 YNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLL 546 (852)
Q Consensus 467 ~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~ 546 (852)
.......++|+|...........++.-..-.+.-|...+.++-+...++|.+.++++|..+-+--.++..+..+.++.+.
T Consensus 343 ~~~~~~~~~p~l~pi~~~~~~~~~~l~i~e~mdlL~~Kt~~e~~~~~IlplL~~S~~~~~~~iQ~~~L~~lptv~e~iD~ 422 (700)
T KOG2137|consen 343 QNEFGPKMLPALKPIYSASDPKQALLFILENMDLLKEKTPPEEVKEKILPLLYRSLEDSDVQIQELALQILPTVAESIDV 422 (700)
T ss_pred hhhhhhhhhHHHHHHhccCCcccchhhHHhhHHHHHhhCChHHHHHHHHHHHHHHhcCcchhhHHHHHHhhhHHHHhccH
Confidence 77777888999888774322222222222223337788888888888889999999999888888888899999999999
Q ss_pred HHHHHhHhhhhhhcccCC-ChhhHHHHHHHHHHHHHHHhhhc
Q psy3914 547 SEVAQRILPALCQLSTDP-EKSVRDSAFKTIKGFLGKLEQVS 587 (852)
Q Consensus 547 ~~~a~~ILP~L~~l~~D~-~~~Vr~~a~~~i~~~l~~le~~~ 587 (852)
..+-+.|||.|..+..-. +..|+..+..+|..+++.+++.+
T Consensus 423 ~~vk~~ilP~l~~l~~~tt~~~vkvn~L~c~~~l~q~lD~~~ 464 (700)
T KOG2137|consen 423 PFVKQAILPRLKNLAFKTTNLYVKVNVLPCLAGLIQRLDKAA 464 (700)
T ss_pred HHHHHHHHHHhhcchhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999885543 45888899999999999888876
|
|
| >KOG2171|consensus | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0015 Score=80.10 Aligned_cols=192 Identities=16% Similarity=0.173 Sum_probs=127.3
Q ss_pred hhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCC--hHHHhH--hHHHHHHhhc------------------------
Q psy3914 392 YQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVP--DAIVNE--QIFQQVALGF------------------------ 443 (852)
Q Consensus 392 f~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~--~~~v~~--~I~P~l~~g~------------------------ 443 (852)
|-..+++.+.+-++.++..||+.-++-+-.|+..++ ...+.. .++|.++..+
T Consensus 156 ~~~~l~~lf~q~~~d~s~~vr~~a~rA~~a~~~~~~~~~~~~~~~~~llP~~l~vl~~~i~~~d~~~a~~~l~~l~El~e 235 (1075)
T KOG2171|consen 156 HLDDLLRLFSQTMTDPSSPVRVAAVRALGAFAEYLENNKSEVDKFRDLLPSLLNVLQEVIQDGDDDAAKSALEALIELLE 235 (1075)
T ss_pred hHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHhccchHHHHHHHHHhHHHHHHhHhhhhccchHHHHHHHHHHHHHHh
Confidence 444666777777777777799888887777777774 221111 2344333332
Q ss_pred -----------------------CCCcHHHHHHHHHHHHHhccc---C---CccchhhhHHHHHHHHhc---cCCCc---
Q psy3914 444 -----------------------LDTNPTIREQTVKSIIHLAPK---L---NYNNLNVETLRHFARLQA---KDDQG--- 488 (852)
Q Consensus 444 -----------------------~D~~~~iRe~tlksi~~l~~k---l---~~~~l~~~lL~~l~kl~~---~D~~~--- 488 (852)
++-+..+|-.++..|+.+++- . ... +-..|++.+.++.. .|++|
T Consensus 236 ~~pk~l~~~l~~ii~~~l~Ia~n~~l~~~~R~~ALe~ivs~~e~Ap~~~k~~~~-~~~~lv~~~l~~mte~~~D~ew~~~ 314 (1075)
T KOG2171|consen 236 SEPKLLRPHLSQIIQFSLEIAKNKELENSIRHLALEFLVSLSEYAPAMCKKLAL-LGHTLVPVLLAMMTEEEDDDEWSNE 314 (1075)
T ss_pred hchHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHhhHHHhhhchh-hhccHHHHHHHhcCCcccchhhccc
Confidence 122345566666555554321 1 111 22334444433321 22222
Q ss_pred ---------ceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccC--HHHHHHhHhhhh
Q psy3914 489 ---------GIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFL--LSEVAQRILPAL 557 (852)
Q Consensus 489 ---------~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~--~~~~a~~ILP~L 557 (852)
..-....-||.++|.+|+++..--++.+++...+.-+...-|-||++||....+=.. ....-.+|||.+
T Consensus 315 d~~ded~~~~~~~~A~~~lDrlA~~L~g~~v~p~~~~~l~~~l~S~~w~~R~AaL~Als~i~EGc~~~m~~~l~~Il~~V 394 (1075)
T KOG2171|consen 315 DDLDEDDEETPYRAAEQALDRLALHLGGKQVLPPLFEALEAMLQSTEWKERHAALLALSVIAEGCSDVMIGNLPKILPIV 394 (1075)
T ss_pred cccccccccCcHHHHHHHHHHHHhcCChhhehHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 223346678889999999998888888899999999999999999999988765433 344668999999
Q ss_pred hhcccCCChhhHHHHHHHHHHHHHHHh
Q psy3914 558 CQLSTDPEKSVRDSAFKTIKGFLGKLE 584 (852)
Q Consensus 558 ~~l~~D~~~~Vr~~a~~~i~~~l~~le 584 (852)
++.+.||++.||.+|..+|.+|-..+-
T Consensus 395 l~~l~DphprVr~AA~naigQ~stdl~ 421 (1075)
T KOG2171|consen 395 LNGLNDPHPRVRYAALNAIGQMSTDLQ 421 (1075)
T ss_pred HhhcCCCCHHHHHHHHHHHHhhhhhhc
Confidence 999999999999999999998765543
|
|
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0003 Score=74.21 Aligned_cols=132 Identities=11% Similarity=-0.050 Sum_probs=80.0
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCC--cceEeeeEEcCCCCeEEEEEeecc--c-HH-
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPS--ILTFLDSVESPSKSLVYLAVEYVE--P-IF- 145 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPn--Ilk~~d~~e~~~~~~~yIVtE~v~--~-L~- 145 (852)
.|....||+. .|..+.+|.+........+.+|+++++.+..-+ +.+++++.+.. +..++|||++. + +.
T Consensus 11 ~G~t~~~y~~----~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~--~~~glv~e~i~G~~~~~~ 84 (226)
T TIGR02172 11 EGGNGESYTH----KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDG--GRLGLIYELIVGKRSFSR 84 (226)
T ss_pred CCCCcceeEe----cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecC--CeeeeeeeecCCccchhh
Confidence 7788889973 244677888877555567899999999986433 57788888776 67889999987 2 11
Q ss_pred -------------HHHHhh---hhcC--CCCCHHH-HHHHHH----------HHHH-HHHHHH---hcCCceecccCCCC
Q psy3914 146 -------------YHLDNT---LKEN--NEKKQIY-ISWGIF----------QITR-ALSFLI---NDADLRHNHVNHTS 192 (852)
Q Consensus 146 -------------~~L~~~---~~~~--~~l~e~~-i~~~l~----------QI~~-aL~fLH---~~~~ivH~DIkp~N 192 (852)
..+.+. +..- ....... ...+.. .+.. ...+|. ....++|||++|.|
T Consensus 85 ~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~~N 164 (226)
T TIGR02172 85 IISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQIGN 164 (226)
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCCCc
Confidence 111110 0000 0001000 000000 0111 122222 12346899999999
Q ss_pred EEEccCCcEEEcccchhh
Q psy3914 193 IFINSCGEWKLGGLEYME 210 (852)
Q Consensus 193 IlV~~~g~~KL~DFg~a~ 210 (852)
|+++++| ..|+||+.+.
T Consensus 165 ii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 165 LITSGKG-TYWIDLGDFG 181 (226)
T ss_pred EEEcCCC-cEEEechhcC
Confidence 9999988 9999999975
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00028 Score=83.38 Aligned_cols=174 Identities=17% Similarity=0.259 Sum_probs=120.3
Q ss_pred chhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhH
Q psy3914 395 KIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVET 474 (852)
Q Consensus 395 ~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~l 474 (852)
...+.+++++.+.|...|-..--.+..|...=++ +---+...+..-+.+.++.+|-.|++.+..+. ...+-..+
T Consensus 42 ~~~~~vi~l~~s~~~~~Krl~yl~l~~~~~~~~~--~~~l~~n~l~kdl~~~n~~~~~lAL~~l~~i~----~~~~~~~l 115 (526)
T PF01602_consen 42 FLFMEVIKLISSKDLELKRLGYLYLSLYLHEDPE--LLILIINSLQKDLNSPNPYIRGLALRTLSNIR----TPEMAEPL 115 (526)
T ss_dssp STHHHHHCTCSSSSHHHHHHHHHHHHHHTTTSHH--HHHHHHHHHHHHHCSSSHHHHHHHHHHHHHH-----SHHHHHHH
T ss_pred hHHHHHHHHhCCCCHHHHHHHHHHHHHHhhcchh--HHHHHHHHHHHhhcCCCHHHHHHHHhhhhhhc----ccchhhHH
Confidence 4567777888888877764443344444333332 22235666777788889999999999888776 44556678
Q ss_pred HHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHH---HHHH
Q psy3914 475 LRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLS---EVAQ 551 (852)
Q Consensus 475 L~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~---~~a~ 551 (852)
++.+.++. .|+.+.||-++++|+.+|...-....... +++.+.++++|+.+.++.+|+.++..+ ..... .+..
T Consensus 116 ~~~v~~ll-~~~~~~VRk~A~~~l~~i~~~~p~~~~~~-~~~~l~~lL~d~~~~V~~~a~~~l~~i--~~~~~~~~~~~~ 191 (526)
T PF01602_consen 116 IPDVIKLL-SDPSPYVRKKAALALLKIYRKDPDLVEDE-LIPKLKQLLSDKDPSVVSAALSLLSEI--KCNDDSYKSLIP 191 (526)
T ss_dssp HHHHHHHH-HSSSHHHHHHHHHHHHHHHHHCHCCHHGG-HHHHHHHHTTHSSHHHHHHHHHHHHHH--HCTHHHHTTHHH
T ss_pred HHHHHHHh-cCCchHHHHHHHHHHHHHhccCHHHHHHH-HHHHHhhhccCCcchhHHHHHHHHHHH--ccCcchhhhhHH
Confidence 88888887 48889999999999998887733333444 788888888999888888888887766 22222 4566
Q ss_pred hHhhhhhhcccCCChhhHHHHHHHHHH
Q psy3914 552 RILPALCQLSTDPEKSVRDSAFKTIKG 578 (852)
Q Consensus 552 ~ILP~L~~l~~D~~~~Vr~~a~~~i~~ 578 (852)
.+...|+.++.+++..++..+++.+..
T Consensus 192 ~~~~~L~~~l~~~~~~~q~~il~~l~~ 218 (526)
T PF01602_consen 192 KLIRILCQLLSDPDPWLQIKILRLLRR 218 (526)
T ss_dssp HHHHHHHHHHTCCSHHHHHHHHHHHTT
T ss_pred HHHHHhhhcccccchHHHHHHHHHHHh
Confidence 666777777677777766666555543
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. Clathrin coats contain both clathrin and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors []. All AP complexes are heterotetramers composed of two large subunits (adaptins), a medium subunit (mu) and a small subunit (sigma). Each subunit has a specific function. Adaptin subunits recognise and bind to clathrin through their hinge region (clathrin box), and recruit accessory proteins that modulate AP function through their C-terminal appendage domains. By contrast, GGAs are monomers composed of four domains, which have functions similar to AP subunits: an N-terminal VHS (Vps27p/Hrs/Stam) domain, a GAT (GGA and Tom1) domain, a hinge region, and a C-terminal GAE (gamma-adaptin ear) domain. The GAE domain is similar to the AP gamma-adaptin ear domain, being responsible for the recruitment of accessory proteins that regulate clathrin-mediated endocytosis []. While clathrin mediates endocytic protein transport from ER to Golgi, coatomers (COPI, COPII) primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the N-terminal domain of various adaptins from different AP clathrin adaptor complexes (including AP1, AP2, AP3 and AP4), and from the beta and gamma subunits of various coatomer (COP) adaptors. This domain has a 2-layer alpha/alpha fold that forms a right-handed superhelix, and is a member of the ARM repeat superfamily []. The N-terminal region of the various AP adaptor proteins share strong sequence identity; by contrast, the C-terminal domains of different adaptins share similar structural folds, but have little sequence identity []. It has been proposed that the N-terminal domain interacts with another uniform component of the coated vesicles. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 1W63_C 2JKR_A 2JKT_A 2XA7_A 2VGL_B 3TJZ_E. |
| >KOG2171|consensus | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0029 Score=77.81 Aligned_cols=306 Identities=16% Similarity=0.191 Sum_probs=196.3
Q ss_pred hHHHHHHHHHhCCCCCCCCccccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHHH---HH--HHH
Q psy3914 251 GLGILIWEVFNGPLQSTNRKSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLID---AL--LFL 325 (852)
Q Consensus 251 SLG~ll~el~tG~~pf~~~~~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv~---~l--~~L 325 (852)
+++=++.++..+..|- .-|+-+.-++...-+.||..|-++--++..+. ..|.+.+.. .+ .|.
T Consensus 99 k~~dviAeia~~~l~e----------~WPell~~L~q~~~S~~~~~rE~al~il~s~~---~~~~~~~~~~~~~l~~lf~ 165 (1075)
T KOG2171|consen 99 KLADVIAEIARNDLPE----------KWPELLQFLFQSTKSPNPSLRESALLILSSLP---ETFGNTLQPHLDDLLRLFS 165 (1075)
T ss_pred HHHHHHHHHHHhcccc----------chHHHHHHHHHHhcCCCcchhHHHHHHHHhhh---hhhccccchhHHHHHHHHH
Confidence 4556677777665442 34555666666667899999988888887663 455554432 22 233
Q ss_pred HHhhccCHHHHhHHHHhhhhhhccCC---ccccc-ccchhhhHhhhhc----CCC--cccchhhhhhhcccCCh--hhhh
Q psy3914 326 EEIQMKDKIDKNKFFNGLASAIDKFP---KLISC-HKVLPQLINAFEY----GEA--GASVLSPLFKIGQMLEH--EDYQ 393 (852)
Q Consensus 326 eel~~k~~~eK~~Ff~~L~~~l~~fP---~~~~~-~kiLP~Ll~~~e~----~~~--~~~vL~~llki~~~l~~--~ef~ 393 (852)
..+.-.+..-|..-.+.+...+...+ ..+.+ .-+||.++..+.. ++. ...+|..+..+....+. ..+-
T Consensus 166 q~~~d~s~~vr~~a~rA~~a~~~~~~~~~~~~~~~~~llP~~l~vl~~~i~~~d~~~a~~~l~~l~El~e~~pk~l~~~l 245 (1075)
T KOG2171|consen 166 QTMTDPSSPVRVAAVRALGAFAEYLENNKSEVDKFRDLLPSLLNVLQEVIQDGDDDAAKSALEALIELLESEPKLLRPHL 245 (1075)
T ss_pred HhccCCcchHHHHHHHHHHHHHHHhccchHHHHHHHHHhHHHHHHhHhhhhccchHHHHHHHHHHHHHHhhchHHHHHHH
Confidence 33444444455555555555554443 22222 2357777665432 322 23344444444443332 2233
Q ss_pred cchhhhhhhccccC--CHHHHHHHHHHHHHHH-------ccCChHHHhHhHHHHHHhhcCCCcH----------------
Q psy3914 394 AKIVPCVVKLFGSN--DRATRSRLLLQLEHFI-------GHVPDAIVNEQIFQQVALGFLDTNP---------------- 448 (852)
Q Consensus 394 ~~i~P~i~~LF~~~--dr~iR~~LL~~L~~~~-------~~l~~~~v~~~I~P~l~~g~~D~~~---------------- 448 (852)
..|+-....++.+. +..+|...|+-|-.++ ++... .-+.|+|.++..+.|...
T Consensus 246 ~~ii~~~l~Ia~n~~l~~~~R~~ALe~ivs~~e~Ap~~~k~~~~--~~~~lv~~~l~~mte~~~D~ew~~~d~~ded~~~ 323 (1075)
T KOG2171|consen 246 SQIIQFSLEIAKNKELENSIRHLALEFLVSLSEYAPAMCKKLAL--LGHTLVPVLLAMMTEEEDDDEWSNEDDLDEDDEE 323 (1075)
T ss_pred HHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHhhHHHhhhchh--hhccHHHHHHHhcCCcccchhhcccccccccccc
Confidence 44555555556554 4577766665444443 33443 777888888887753211
Q ss_pred HHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHH--HHHHHHHhhccCCC
Q psy3914 449 TIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQK--VLISAFSRAMRDPF 526 (852)
Q Consensus 449 ~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~--vLi~af~r~lkDp~ 526 (852)
+---.+..++-.++-+|+-+++---+++++.++. ..++|.=|-..++-|+-|++--++..+.+ -+++..+..++||.
T Consensus 324 ~~~~~A~~~lDrlA~~L~g~~v~p~~~~~l~~~l-~S~~w~~R~AaL~Als~i~EGc~~~m~~~l~~Il~~Vl~~l~Dph 402 (1075)
T KOG2171|consen 324 TPYRAAEQALDRLALHLGGKQVLPPLFEALEAML-QSTEWKERHAALLALSVIAEGCSDVMIGNLPKILPIVLNGLNDPH 402 (1075)
T ss_pred CcHHHHHHHHHHHHhcCChhhehHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCC
Confidence 1233456777888899999988888899998887 48899999999999999999877765543 35677788999999
Q ss_pred hHHHHHHHHHHHHHhhccCHH---HHHHhHhhhhhhcccCCCh-hhHHHH
Q psy3914 527 PPARNAGVLALAATQQYFLLS---EVAQRILPALCQLSTDPEK-SVRDSA 572 (852)
Q Consensus 527 ~~~R~a~l~~l~~~~~~~~~~---~~a~~ILP~L~~l~~D~~~-~Vr~~a 572 (852)
+-+|.||+.++.-+..-|.++ ....+|+|+|...+.|+.- .|...|
T Consensus 403 prVr~AA~naigQ~stdl~p~iqk~~~e~l~~aL~~~ld~~~~~rV~ahA 452 (1075)
T KOG2171|consen 403 PRVRYAALNAIGQMSTDLQPEIQKKHHERLPPALIALLDSTQNVRVQAHA 452 (1075)
T ss_pred HHHHHHHHHHHHhhhhhhcHHHHHHHHHhccHHHHHHhcccCchHHHHHH
Confidence 999999999999888888765 4777888888887777653 444333
|
|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00067 Score=85.54 Aligned_cols=148 Identities=22% Similarity=0.241 Sum_probs=100.4
Q ss_pred hhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHH
Q psy3914 399 CVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHF 478 (852)
Q Consensus 399 ~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l 478 (852)
.+++++..+|+.+|...+..|..+ .. .+.|...+.|.++.||..+++++-.+... ....++.|
T Consensus 718 ~l~~~L~D~d~~VR~~Av~aL~~~----~~-------~~~l~~~l~D~~~~VR~~aa~aL~~~~~~------~~~~~~~L 780 (897)
T PRK13800 718 LFAAALGDPDHRVRIEAVRALVSV----DD-------VESVAGAATDENREVRIAVAKGLATLGAG------GAPAGDAV 780 (897)
T ss_pred HHHHHhcCCCHHHHHHHHHHHhcc----cC-------cHHHHHHhcCCCHHHHHHHHHHHHHhccc------cchhHHHH
Confidence 345666777777777766666643 11 13355677788888888887777665432 11124455
Q ss_pred HHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhh
Q psy3914 479 ARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALC 558 (852)
Q Consensus 479 ~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~ 558 (852)
.++. +|+++.||..++..|+++... ..+++.+...|+|+...+|.+|+.+|..+. ....+|.|.
T Consensus 781 ~~ll-~D~d~~VR~aA~~aLg~~g~~-------~~~~~~l~~aL~d~d~~VR~~Aa~aL~~l~--------~~~a~~~L~ 844 (897)
T PRK13800 781 RALT-GDPDPLVRAAALAALAELGCP-------PDDVAAATAALRASAWQVRQGAARALAGAA--------ADVAVPALV 844 (897)
T ss_pred HHHh-cCCCHHHHHHHHHHHHhcCCc-------chhHHHHHHHhcCCChHHHHHHHHHHHhcc--------ccchHHHHH
Confidence 5554 588888898888888877432 122334566788888889998888886432 234568899
Q ss_pred hcccCCChhhHHHHHHHHHHH
Q psy3914 559 QLSTDPEKSVRDSAFKTIKGF 579 (852)
Q Consensus 559 ~l~~D~~~~Vr~~a~~~i~~~ 579 (852)
+++-|++..||..|..++..+
T Consensus 845 ~~L~D~~~~VR~~A~~aL~~~ 865 (897)
T PRK13800 845 EALTDPHLDVRKAAVLALTRW 865 (897)
T ss_pred HHhcCCCHHHHHHHHHHHhcc
Confidence 999999999999888887664
|
|
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0011 Score=68.92 Aligned_cols=133 Identities=11% Similarity=0.033 Sum_probs=78.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCc-----------hHHHHHHHHHHHhCCCCCcceE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADT-----------YEPALSYVKKLKTLRHPSILTF 122 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~-----------~~~~~~E~~~Lk~LrHPnIlk~ 122 (852)
..|.+.+.+- ...-. |.+.-..+|..+.+|....... -..+.+.+..+..++..++..+
T Consensus 31 ~~~~~~kv~k--------~~~r~--~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~ 100 (229)
T PF06176_consen 31 NNYKIIKVFK--------NTKRN--YVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEP 100 (229)
T ss_pred CCceEEEeec--------CCCcc--EEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccc
Confidence 4466666665 22223 3333344778888888765110 0123444454555543333222
Q ss_pred ee---eEEcCC---CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEE
Q psy3914 123 LD---SVESPS---KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIF 194 (852)
Q Consensus 123 ~d---~~e~~~---~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIl 194 (852)
.+ +.+-.. ....+++|||++ +|.++. .+++. ..-.|.+++.-|| ..|++|||.+|.|++
T Consensus 101 ~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~--------~i~e~----~~~ki~~~ikqlH-~~G~~HGD~hpgNFl 167 (229)
T PF06176_consen 101 ADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIE--------DIDED----LAEKIVEAIKQLH-KHGFYHGDPHPGNFL 167 (229)
T ss_pred ccceeeeeeeeccceeEEEEEEEEecCeecccch--------hcCHH----HHHHHHHHHHHHH-HcCCccCCCCcCcEE
Confidence 22 221110 034568999999 455443 12221 2245778899999 999999999999999
Q ss_pred EccCCcEEEcccchhh
Q psy3914 195 INSCGEWKLGGLEYME 210 (852)
Q Consensus 195 V~~~g~~KL~DFg~a~ 210 (852)
++.++ ++++||+..+
T Consensus 168 v~~~~-i~iID~~~k~ 182 (229)
T PF06176_consen 168 VSNNG-IRIIDTQGKR 182 (229)
T ss_pred EECCc-EEEEECcccc
Confidence 98554 9999998754
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >KOG1242|consensus | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0044 Score=71.93 Aligned_cols=294 Identities=13% Similarity=0.173 Sum_probs=190.4
Q ss_pred HHHHHHHhccCCCCCCCC--HHHHHHhhcCCCCCCcchHHHHH-HHHHHhhccCHHHHhHHHHhhhhhhccCCccccccc
Q psy3914 282 LKRVYLELISERPNQRPN--PADFIMRNRKPGGYFKNDLIDAL-LFLEEIQMKDKIDKNKFFNGLASAIDKFPKLISCHK 358 (852)
Q Consensus 282 L~~li~~lL~~nP~~Rps--~~elL~~l~~~~~fF~n~lv~~l-~~Leel~~k~~~eK~~Ff~~L~~~l~~fP~~~~~~k 358 (852)
+..+.+..-..++..|.- .-.+...+...++.|.--++..+ ..+.++..+.+.-+..-......++..|+.. ....
T Consensus 176 l~~l~~ai~dk~~~~~re~~~~a~~~~~~~Lg~~~EPyiv~~lp~il~~~~d~~~~Vr~Aa~~a~kai~~~~~~~-aVK~ 254 (569)
T KOG1242|consen 176 LDNLSKAIIDKKSALNREAALLAFEAAQGNLGPPFEPYIVPILPSILTNFGDKINKVREAAVEAAKAIMRCLSAY-AVKL 254 (569)
T ss_pred HHHHHHHhcccchhhcHHHHHHHHHHHHHhcCCCCCchHHhhHHHHHHHhhccchhhhHHHHHHHHHHHHhcCcc-hhhH
Confidence 344445555566666552 22222333344667766666655 5567777888888888888888888888754 4456
Q ss_pred chhhhHhhhhcC--CCcccchhhhhhhcccCC--hhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHh
Q psy3914 359 VLPQLINAFEYG--EAGASVLSPLFKIGQMLE--HEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQ 434 (852)
Q Consensus 359 iLP~Ll~~~e~~--~~~~~vL~~llki~~~l~--~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~ 434 (852)
+||.|+..+... ..-..++..+=-++...+ -+.+...|+|.+......+.+.+|-.--+.|..|...++..+ -..
T Consensus 255 llpsll~~l~~~kWrtK~aslellg~m~~~ap~qLs~~lp~iiP~lsevl~DT~~evr~a~~~~l~~~~svidN~d-I~~ 333 (569)
T KOG1242|consen 255 LLPSLLGSLLEAKWRTKMASLELLGAMADCAPKQLSLCLPDLIPVLSEVLWDTKPEVRKAGIETLLKFGSVIDNPD-IQK 333 (569)
T ss_pred hhhhhHHHHHHHhhhhHHHHHHHHHHHHHhchHHHHHHHhHhhHHHHHHHccCCHHHHHHHHHHHHHHHHhhccHH-HHH
Confidence 788888877665 111112221111111111 245678899999999999999999888888888888888776 567
Q ss_pred HHHHHHhhcCCCcHHHHHHHHHHHH--HhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhccccccc-ChhhH-
Q psy3914 435 IFQQVALGFLDTNPTIREQTVKSII--HLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHL-HPQIR- 510 (852)
Q Consensus 435 I~P~l~~g~~D~~~~iRe~tlksi~--~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L-~~~~~- 510 (852)
+.|.++.++.|..-.+. +|++++. .++.-++...+ .-+.|-+.+-. .+.+-.++-.|++-++.++.-. ++...
T Consensus 334 ~ip~Lld~l~dp~~~~~-e~~~~L~~ttFV~~V~~psL-almvpiL~R~l-~eRst~~kr~t~~IidNm~~LveDp~~la 410 (569)
T KOG1242|consen 334 IIPTLLDALADPSCYTP-ECLDSLGATTFVAEVDAPSL-ALMVPILKRGL-AERSTSIKRKTAIIIDNMCKLVEDPKDLA 410 (569)
T ss_pred HHHHHHHHhcCcccchH-HHHHhhcceeeeeeecchhH-HHHHHHHHHHH-hhccchhhhhHHHHHHHHHHhhcCHHHHh
Confidence 88999999999874443 4455443 22333344332 22455555554 4677778888888899988888 44433
Q ss_pred --HHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccCCChhh-HHHHHHHHHHHHH
Q psy3914 511 --QKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSV-RDSAFKTIKGFLG 581 (852)
Q Consensus 511 --~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~V-r~~a~~~i~~~l~ 581 (852)
--.|+|.+-+.+.||-+++|-.+..++.++.+-.+.... -.++|.|.....+....+ |.-+.+.+...+.
T Consensus 411 pfl~~Llp~lk~~~~d~~PEvR~vaarAL~~l~e~~g~~~f-~d~~p~l~e~~~~~k~~~~~~g~aq~l~evl~ 483 (569)
T KOG1242|consen 411 PFLPSLLPGLKENLDDAVPEVRAVAARALGALLERLGEVSF-DDLIPELSETLTSEKSLVDRSGAAQDLSEVLA 483 (569)
T ss_pred hhHHHHhhHHHHHhcCCChhHHHHHHHHHHHHHHHHHhhcc-cccccHHHHhhccchhhhhhHHHhhhHHHHHh
Confidence 335678888889999999999999999888776654433 667788877776665543 3344444444333
|
|
| >PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0016 Score=66.07 Aligned_cols=110 Identities=15% Similarity=0.236 Sum_probs=92.4
Q ss_pred CHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCC
Q psy3914 408 DRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQ 487 (852)
Q Consensus 408 dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~ 487 (852)
++.+|..++--|..+.-+.+ .+-+...|.++.++.|.++.||.+|+..+.+|+-. +.--++..++..+.++. .|++
T Consensus 1 ~~~vR~n~i~~l~DL~~r~~--~~ve~~~~~l~~~L~D~~~~VR~~al~~Ls~Li~~-d~ik~k~~l~~~~l~~l-~D~~ 76 (178)
T PF12717_consen 1 DPSVRNNAIIALGDLCIRYP--NLVEPYLPNLYKCLRDEDPLVRKTALLVLSHLILE-DMIKVKGQLFSRILKLL-VDEN 76 (178)
T ss_pred CHHHHHHHHHHHHHHHHhCc--HHHHhHHHHHHHHHCCCCHHHHHHHHHHHHHHHHc-CceeehhhhhHHHHHHH-cCCC
Confidence 46789888888888877776 46678899999999999999999999999988754 44555778877877776 6999
Q ss_pred cceeeehhhhhcccccccChhhHHHHHHHHHHhh
Q psy3914 488 GGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRA 521 (852)
Q Consensus 488 ~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~ 521 (852)
+.||-++..||..+....+++...+.++..+...
T Consensus 77 ~~Ir~~A~~~~~e~~~~~~~~~i~~~~~e~i~~l 110 (178)
T PF12717_consen 77 PEIRSLARSFFSELLKKRNPNIIYNNFPELISSL 110 (178)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 9999999999999999999988888887766653
|
|
| >KOG1241|consensus | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0035 Score=73.85 Aligned_cols=345 Identities=16% Similarity=0.210 Sum_probs=214.1
Q ss_pred CCChhHHHH----HHHhcc-CCCCCCCCHHHHHHhhcCCCCCCcchHHHHHHH-HHHhhccC-HHHHhHHHHhhhhhhcc
Q psy3914 277 NIPENLKRV----YLELIS-ERPNQRPNPADFIMRNRKPGGYFKNDLIDALLF-LEEIQMKD-KIDKNKFFNGLASAIDK 349 (852)
Q Consensus 277 ~ip~~L~~l----i~~lL~-~nP~~Rps~~elL~~l~~~~~fF~n~lv~~l~~-Leel~~k~-~~eK~~Ff~~L~~~l~~ 349 (852)
.+|.+.++. +.+-|. +.|..+-++.+.+...-. ...=.|..-..+.. ..+..... ..-|..-+..|.=.-+.
T Consensus 82 ~l~~e~reqVK~~il~tL~~~ep~~~s~Aaq~va~IA~-~ElP~n~wp~li~~lv~nv~~~~~~~~k~~slealGyice~ 160 (859)
T KOG1241|consen 82 QLPAEIREQVKNNILRTLGSPEPRRPSSAAQCVAAIAC-IELPQNQWPELIVTLVSNVGEEQASMVKESSLEALGYICED 160 (859)
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCCccchHHHHHHHHHH-hhCchhhCHHHHHHHHHhcccccchHHHHHHHHHHHHHHcc
Confidence 555555544 444455 777777677777764210 01111211111111 12222211 13555555555433344
Q ss_pred CCcccc---cccchhhhHhhhhcCCCccc--------chhhhhhhcccCChhhhhcchhhhhhhccccCCHHHHHHHHH-
Q psy3914 350 FPKLIS---CHKVLPQLINAFEYGEAGAS--------VLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLL- 417 (852)
Q Consensus 350 fP~~~~---~~kiLP~Ll~~~e~~~~~~~--------vL~~llki~~~l~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~- 417 (852)
+.+++. .+.||-.++.-....+.... ++..+-....+++.+.=...|.-++...-.++|-.||.+.++
T Consensus 161 i~pevl~~~sN~iLtaIv~gmrk~e~s~~vRLaa~~aL~nsLef~~~nF~~E~ern~iMqvvcEatq~~d~~i~~aa~~C 240 (859)
T KOG1241|consen 161 IDPEVLEQQSNDILTAIVQGMRKEETSAAVRLAALNALYNSLEFTKANFNNEMERNYIMQVVCEATQSPDEEIQVAAFQC 240 (859)
T ss_pred CCHHHHHHHHhHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHHhhccHhhhceeeeeeeecccCCcHHHHHHHHHH
Confidence 444333 23344444433332222111 112222233366666666788888888899999999865555
Q ss_pred ---HHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhc-ccCC---------ccchh-----------hh
Q psy3914 418 ---QLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLA-PKLN---------YNNLN-----------VE 473 (852)
Q Consensus 418 ---~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~-~kl~---------~~~l~-----------~~ 473 (852)
-+.+|-+++.+. ..+-+|+.-..++..+++.|-.+++..=..++ ++++ +..+- ..
T Consensus 241 lvkIm~LyY~~m~~y-M~~alfaitl~amks~~deValQaiEFWsticeEEiD~~~e~~e~~d~~~~p~~~~fa~~a~~~ 319 (859)
T KOG1241|consen 241 LVKIMSLYYEFMEPY-MEQALFAITLAAMKSDNDEVALQAIEFWSTICEEEIDLAIEYGEAVDQGLPPSSKYFARQALQD 319 (859)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHhH
Confidence 455666666544 67789999999999999999999998776443 3333 11111 24
Q ss_pred HHHHHHHHhcc------CCCcceeeehhhhhcccccccChhhHHHHHHHHHHh-hccCCChHHHHHHHHHHHHHhhccCH
Q psy3914 474 TLRHFARLQAK------DDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSR-AMRDPFPPARNAGVLALAATQQYFLL 546 (852)
Q Consensus 474 lL~~l~kl~~~------D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r-~lkDp~~~~R~a~l~~l~~~~~~~~~ 546 (852)
++|.|..+..+ |++|.+-...-.||+-++...+..+..-|| .|+. .++-|...-|-||++++....+.-..
T Consensus 320 v~P~Ll~~L~kqde~~d~DdWnp~kAAg~CL~l~A~~~~D~Iv~~Vl--~Fiee~i~~pdwr~reaavmAFGSIl~gp~~ 397 (859)
T KOG1241|consen 320 VVPVLLELLTKQDEDDDDDDWNPAKAAGVCLMLFAQCVGDDIVPHVL--PFIEENIQNPDWRNREAAVMAFGSILEGPEP 397 (859)
T ss_pred hhHHHHHHHHhCCCCcccccCcHHHHHHHHHHHHHHHhcccchhhhH--HHHHHhcCCcchhhhhHHHHHHHhhhcCCch
Confidence 66666655443 467999999999999999999988877666 4765 89999999999999999988777664
Q ss_pred H---HHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhhhccCCCcccccccc---ccccCCCCCccccchhhhHHh
Q psy3914 547 S---EVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQVSENPSLRESMEAD---VHTATPSLSNAAATWADWAVT 620 (852)
Q Consensus 547 ~---~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~gwa~~ 620 (852)
. -+....||.+..++.|+...||+.+.-++..+.+.+-...-+..+..++-.- .-..-| ..++-..||+-
T Consensus 398 ~~Lt~iV~qalp~ii~lm~D~sl~VkdTaAwtlgrI~d~l~e~~~n~~~l~~~l~~l~~gL~DeP----rva~N~CWAf~ 473 (859)
T KOG1241|consen 398 DKLTPIVIQALPSIINLMSDPSLWVKDTAAWTLGRIADFLPEAIINQELLQSKLSALLEGLNDEP----RVASNVCWAFI 473 (859)
T ss_pred hhhhHHHhhhhHHHHHHhcCchhhhcchHHHHHHHHHhhchhhcccHhhhhHHHHHHHHHhhhCc----hHHHHHHHHHH
Confidence 4 4778889999999999999999988888888888777443322222211000 000112 23556789999
Q ss_pred hhccccccc
Q psy3914 621 AVTSKFYRS 629 (852)
Q Consensus 621 ~~~~k~~~~ 629 (852)
++..-.|.+
T Consensus 474 ~Laea~~eA 482 (859)
T KOG1241|consen 474 SLAEAAYEA 482 (859)
T ss_pred HHHHHHHHh
Confidence 987766554
|
|
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0016 Score=69.13 Aligned_cols=132 Identities=11% Similarity=-0.008 Sum_probs=78.6
Q ss_pred CceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCC-CCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHH--
Q psy3914 74 TFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLR-HPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHL-- 148 (852)
Q Consensus 74 s~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L-- 148 (852)
+-..||+.... +..+.||+..... ...+.+|+++++.+. +--+.++++..... +..++|||++. +|....
T Consensus 11 ~~~~v~~~~~~--~~~~~vk~~~~~~-~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~--~~~~lv~e~i~G~~l~~~~~~ 85 (244)
T cd05150 11 SGATVYRLDGK--NPGLYLKIAPSGP-TYELEREAERLRWLAGKLPVPEVIDYGSDD--GRAWLLTSAVPGVPAAALWEE 85 (244)
T ss_pred CcCeEEEEcCC--CCcEEEEecCCCc-ccchHHHHHHHHHHHhcCCCCeEEEEEecC--CccEEEEEeeCCccHhHhhcc
Confidence 34778888663 4678888776532 345678888888874 44577888877765 67889999997 444321
Q ss_pred --------------HhhhhcC---CCCCHH---HHHHH---H----------------HHHHHHHHHHH------hcCCc
Q psy3914 149 --------------DNTLKEN---NEKKQI---YISWG---I----------------FQITRALSFLI------NDADL 183 (852)
Q Consensus 149 --------------~~~~~~~---~~l~e~---~i~~~---l----------------~QI~~aL~fLH------~~~~i 183 (852)
.+..... ..+... .+... + ..+...+..|- ....+
T Consensus 86 ~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 165 (244)
T cd05150 86 LEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEEDLVV 165 (244)
T ss_pred cCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCceEE
Confidence 0000000 011100 00000 0 00111222221 12348
Q ss_pred eecccCCCCEEEccCCcEEEcccchhh
Q psy3914 184 RHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 184 vH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
+|||+.|.||+++.++...|+||+.+.
T Consensus 166 ~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 166 THGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred ECCCCCCccEEEeCCcEEEEEEccccc
Confidence 999999999999998778899999864
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00097 Score=84.07 Aligned_cols=147 Identities=15% Similarity=0.151 Sum_probs=99.3
Q ss_pred hhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHH
Q psy3914 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETL 475 (852)
Q Consensus 396 i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL 475 (852)
.++.|...+..+|+.+|...++.|..+. ...++|.|...+.|.++.||..++.++..+...+...
T Consensus 622 ~~~~L~~~L~D~d~~VR~~Av~~L~~~~--------~~~~~~~L~~aL~D~d~~VR~~Aa~aL~~l~~~~~~~------- 686 (897)
T PRK13800 622 SVAELAPYLADPDPGVRRTAVAVLTETT--------PPGFGPALVAALGDGAAAVRRAAAEGLRELVEVLPPA------- 686 (897)
T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHhhhc--------chhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCch-------
Confidence 4567777788899999988888887663 2457888999999999999999999988775544321
Q ss_pred HHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhh
Q psy3914 476 RHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILP 555 (852)
Q Consensus 476 ~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP 555 (852)
+.+.... .|+++.||..++-.|+.+... . ...|.+.|+|+.+.+|.+++.+|..+.. .+
T Consensus 687 ~~L~~~L-~~~d~~VR~~A~~aL~~~~~~---~------~~~l~~~L~D~d~~VR~~Av~aL~~~~~-----------~~ 745 (897)
T PRK13800 687 PALRDHL-GSPDPVVRAAALDVLRALRAG---D------AALFAAALGDPDHRVRIEAVRALVSVDD-----------VE 745 (897)
T ss_pred HHHHHHh-cCCCHHHHHHHHHHHHhhccC---C------HHHHHHHhcCCCHHHHHHHHHHHhcccC-----------cH
Confidence 1222222 467778888888888776421 0 1245667788888888888887765321 12
Q ss_pred hhhhcccCCChhhHHHHHHHHHH
Q psy3914 556 ALCQLSTDPEKSVRDSAFKTIKG 578 (852)
Q Consensus 556 ~L~~l~~D~~~~Vr~~a~~~i~~ 578 (852)
.|..++.|++..||..+...+..
T Consensus 746 ~l~~~l~D~~~~VR~~aa~aL~~ 768 (897)
T PRK13800 746 SVAGAATDENREVRIAVAKGLAT 768 (897)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHH
Confidence 34455666666666655555543
|
|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.001 Score=69.93 Aligned_cols=146 Identities=14% Similarity=0.153 Sum_probs=94.0
Q ss_pred hhhhhccccCCHHHHHHHHHHHHHHHccCChH--HHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhH-
Q psy3914 398 PCVVKLFGSNDRATRSRLLLQLEHFIGHVPDA--IVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVET- 474 (852)
Q Consensus 398 P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~--~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~l- 474 (852)
+.|.+...+.-..+-...+.-+..++.++... ..-+.++|.|+.-+.|++..||+.+...+..++...+. ...+
T Consensus 56 ~~i~~~l~d~Rs~v~~~A~~~l~~l~~~l~~~~~~~~~~~l~~Ll~~~~~~~~~i~~~a~~~L~~i~~~~~~---~~~~~ 132 (228)
T PF12348_consen 56 DAIIKQLSDLRSKVSKTACQLLSDLARQLGSHFEPYADILLPPLLKKLGDSKKFIREAANNALDAIIESCSY---SPKIL 132 (228)
T ss_dssp HHHHH-S-HH---HHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHGGG---HHHHHHHHHHHHHHHTTS-H-----HHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHCCc---HHHHH
Confidence 44444444333333333444455555555443 24577899999999999999999999999999887661 1234
Q ss_pred HHHHHHHhccCCCcceeeehhhhhcccccccC---hhhH----HHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHH
Q psy3914 475 LRHFARLQAKDDQGGIRTNTTVCVGKIAHHLH---PQIR----QKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLS 547 (852)
Q Consensus 475 L~~l~kl~~~D~~~~IR~nt~iclgkia~~L~---~~~~----~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~ 547 (852)
++.+.... ++.++.||.-++.||..+....+ .... .+.+++++.+.+.|+.+.+|.+|-.++..+++.|+..
T Consensus 133 ~~~l~~~~-~~Kn~~vR~~~~~~l~~~l~~~~~~~~~l~~~~~~~~l~~~l~~~l~D~~~~VR~~Ar~~~~~l~~~~~~~ 211 (228)
T PF12348_consen 133 LEILSQGL-KSKNPQVREECAEWLAIILEKWGSDSSVLQKSAFLKQLVKALVKLLSDADPEVREAARECLWALYSHFPER 211 (228)
T ss_dssp HHHHHHHT-T-S-HHHHHHHHHHHHHHHTT-----GGG--HHHHHHHHHHHHHHHTSS-HHHHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHH-hCCCHHHHHHHHHHHHHHHHHccchHhhhcccchHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHh
Confidence 45555554 68999999999999998888877 2222 2568899999999999999999999999998888643
|
The domain is also found in other proteins involved in microtubule binding, including STU1, MOR1 and spindle pole body component Alp14.; PDB: 2QK2_A. |
| >KOG1242|consensus | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0078 Score=69.95 Aligned_cols=222 Identities=14% Similarity=0.232 Sum_probs=143.0
Q ss_pred cchhhhHhhhhcC-C-CcccchhhhhhhcccCChhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChH--HHhH
Q psy3914 358 KVLPQLINAFEYG-E-AGASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDA--IVNE 433 (852)
Q Consensus 358 kiLP~Ll~~~e~~-~-~~~~vL~~llki~~~l~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~--~v~~ 433 (852)
.++|.++..+-.. . ....+.-.+-.|-..++..--...+.+.|..++.. .-..++..++-+..+...-+.. ....
T Consensus 216 ~~lp~il~~~~d~~~~Vr~Aa~~a~kai~~~~~~~aVK~llpsll~~l~~~-kWrtK~aslellg~m~~~ap~qLs~~lp 294 (569)
T KOG1242|consen 216 PILPSILTNFGDKINKVREAAVEAAKAIMRCLSAYAVKLLLPSLLGSLLEA-KWRTKMASLELLGAMADCAPKQLSLCLP 294 (569)
T ss_pred hhHHHHHHHhhccchhhhHHHHHHHHHHHHhcCcchhhHhhhhhHHHHHHH-hhhhHHHHHHHHHHHHHhchHHHHHHHh
Confidence 4677777666321 1 11222111222223333333233334444455555 3344555566666555554432 2445
Q ss_pred hHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhc--cCCCcceeeehhhhhc-----ccccccC
Q psy3914 434 QIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQA--KDDQGGIRTNTTVCVG-----KIAHHLH 506 (852)
Q Consensus 434 ~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~--~D~~~~IR~nt~iclg-----kia~~L~ 506 (852)
.|.|-+..-+.|+.+.||++..++|..+...++ |.+|.+++-++.. .|+.- .+--|+. .++.+++
T Consensus 295 ~iiP~lsevl~DT~~evr~a~~~~l~~~~svid----N~dI~~~ip~Lld~l~dp~~----~~~e~~~~L~~ttFV~~V~ 366 (569)
T KOG1242|consen 295 DLIPVLSEVLWDTKPEVRKAGIETLLKFGSVID----NPDIQKIIPTLLDALADPSC----YTPECLDSLGATTFVAEVD 366 (569)
T ss_pred HhhHHHHHHHccCCHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHhcCccc----chHHHHHhhcceeeeeeec
Confidence 789999999999999999999999999999988 6667666665531 35431 3334443 4455666
Q ss_pred hhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhcc-CHH---HHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHH
Q psy3914 507 PQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYF-LLS---EVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGK 582 (852)
Q Consensus 507 ~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~-~~~---~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~ 582 (852)
+. .-.+|+|.+.|.+.+-....+-.++..+.-.+... ++. ...-++||.|-.-+.|+-+.||.-+.+++..++++
T Consensus 367 ~p-sLalmvpiL~R~l~eRst~~kr~t~~IidNm~~LveDp~~lapfl~~Llp~lk~~~~d~~PEvR~vaarAL~~l~e~ 445 (569)
T KOG1242|consen 367 AP-SLALMVPILKRGLAERSTSIKRKTAIIIDNMCKLVEDPKDLAPFLPSLLPGLKENLDDAVPEVRAVAARALGALLER 445 (569)
T ss_pred ch-hHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhcCHHHHhhhHHHHhhHHHHHhcCCChhHHHHHHHHHHHHHHH
Confidence 64 34578899999998877777666655555444444 444 45688899999999999999999999999999999
Q ss_pred HhhhccC
Q psy3914 583 LEQVSEN 589 (852)
Q Consensus 583 le~~~~~ 589 (852)
++..+.+
T Consensus 446 ~g~~~f~ 452 (569)
T KOG1242|consen 446 LGEVSFD 452 (569)
T ss_pred HHhhccc
Confidence 9988764
|
|
| >KOG1035|consensus | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0017 Score=80.25 Aligned_cols=195 Identities=12% Similarity=0.113 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHhCCCCCcceEeeeEEcC-CCC-eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHH
Q psy3914 102 EPALSYVKKLKTLRHPSILTFLDSVESP-SKS-LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFL 177 (852)
Q Consensus 102 ~~~~~E~~~Lk~LrHPnIlk~~d~~e~~-~~~-~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fL 177 (852)
....-|+..+..++|+|+..++.+.... ..+ .+.+..|++. ++...+. .-+.++....+.+..++.+||.++
T Consensus 227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q----~v~~i~~~~~r~~~~~~~~GL~~~ 302 (1351)
T KOG1035|consen 227 QTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ----SVGSIPLETLRILHQKLLEGLAYL 302 (1351)
T ss_pred HHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHh----hccccCHHHHHHHHHHHhhhHHHH
Confidence 3455667778889999999999886654 112 2344566666 5666663 236778888888899999999999
Q ss_pred HhcCCceecccCCC---CEEEccCCcEEEc--ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCc--chhHH
Q psy3914 178 INDADLRHNHVNHT---SIFINSCGEWKLG--GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKC--STDMY 250 (852)
Q Consensus 178 H~~~~ivH~DIkp~---NIlV~~~g~~KL~--DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~--~sDIw 250 (852)
| ...+.|.-+..+ ..-++..+....+ +|+.+....+..... ....+..+.++|......... ..|+|
T Consensus 303 h-~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~-----~~~~~~~~~~~e~~~~~~~~~~r~~dL~ 376 (1351)
T KOG1035|consen 303 H-SLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF-----SDLLAEIRNADEDLKENTAKKSRLTDLW 376 (1351)
T ss_pred H-HhccceeEEecccccccccCccceeecchhhhcccccCCCcccch-----hhcCccccccccccccccchhhhhhHHH
Confidence 9 676666655555 3334445566666 888776543321111 122334677888874444444 47999
Q ss_pred hHHHHHHHHHhCCCCCCCCcc-ccCcCC-CChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 251 GLGILIWEVFNGPLQSTNRKS-LSNIDN-IPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 251 SLG~ll~el~tG~~pf~~~~~-l~~~~~-ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.+|.+...+..|..+-..... ...+.. ....+.+...+|+..++++|+++.+++.|
T Consensus 377 ~lgll~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~ 434 (1351)
T KOG1035|consen 377 CLGLLLLQLSQGEDISEKSAVPVSLLDVLSTSELLDALPKCLDEDSEERLSALELLTH 434 (1351)
T ss_pred HHHHHHhhhhhcCcccccccchhhhhccccchhhhhhhhhhcchhhhhccchhhhhhc
Confidence 999999999888654321111 111221 22267888899999999999999999997
|
|
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.004 Score=63.80 Aligned_cols=100 Identities=18% Similarity=0.081 Sum_probs=75.2
Q ss_pred HHHHHHHHhCCC-CCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-
Q psy3914 105 LSYVKKLKTLRH-PSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLIND- 180 (852)
Q Consensus 105 ~~E~~~Lk~LrH-PnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~- 180 (852)
.+|.-+|+.+.+ ++++++++++- .++|+||+. ++...- ..+..-...+......++.++++.+.+|++.
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG------~~~v~E~~~~~~~~~~~-~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~ 79 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG------RFYVVEYVGAGSLYGIY-RPLSQFLQSPWEQRAKIALQLLELLEELDHGP 79 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC------CEEEEEeecCccccccc-cccccccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 568888999986 69999999983 245889988 332100 0000112456788999999999999999931
Q ss_pred -CCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 181 -ADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 181 -~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
..+...|++++|+-|+++|.+|+.|++.+..
T Consensus 80 ~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~ 111 (188)
T PF12260_consen 80 LGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFV 111 (188)
T ss_pred CCcEEEeecchHHeEEeCCCcEEEEechhcch
Confidence 3478889999999999999999999998764
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0039 Score=76.16 Aligned_cols=179 Identities=17% Similarity=0.205 Sum_probs=117.8
Q ss_pred cchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhh
Q psy3914 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVE 473 (852)
Q Consensus 394 ~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~ 473 (852)
+.++|-+++++.++|-.+|-.+.-.+..|++.-++..+ -....|..-+.|.||.||-.+|+.|.. +....+-..
T Consensus 67 S~LF~dVvk~~~S~d~elKKLvYLYL~~ya~~~pelal--LaINtl~KDl~d~Np~IRaLALRtLs~----Ir~~~i~e~ 140 (746)
T PTZ00429 67 SYLFVDVVKLAPSTDLELKKLVYLYVLSTARLQPEKAL--LAVNTFLQDTTNSSPVVRALAVRTMMC----IRVSSVLEY 140 (746)
T ss_pred hHHHHHHHHHhCCCCHHHHHHHHHHHHHHcccChHHHH--HHHHHHHHHcCCCCHHHHHHHHHHHHc----CCcHHHHHH
Confidence 34677788888888888876655566666554433221 235667778888899999999888764 344555666
Q ss_pred HHHHHHHHhccCCCcceeeehhhhhcccccccChhh-HHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhcc--------
Q psy3914 474 TLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQI-RQKVLISAFSRAMRDPFPPARNAGVLALAATQQYF-------- 544 (852)
Q Consensus 474 lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~-~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~-------- 544 (852)
+++.+.+.. .|.++-||-++++|+.||-.. +++. ...-+++-+..++.|..+-+...|+.+|..+.+..
T Consensus 141 l~~~lkk~L-~D~~pYVRKtAalai~Kly~~-~pelv~~~~~~~~L~~LL~D~dp~Vv~nAl~aL~eI~~~~~~~l~l~~ 218 (746)
T PTZ00429 141 TLEPLRRAV-ADPDPYVRKTAAMGLGKLFHD-DMQLFYQQDFKKDLVELLNDNNPVVASNAAAIVCEVNDYGSEKIESSN 218 (746)
T ss_pred HHHHHHHHh-cCCCHHHHHHHHHHHHHHHhh-CcccccccchHHHHHHHhcCCCccHHHHHHHHHHHHHHhCchhhHHHH
Confidence 777777776 588899999999999988543 3333 22335555666778888888888877765554321
Q ss_pred ----------------------------CH--HHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHH
Q psy3914 545 ----------------------------LL--SEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFL 580 (852)
Q Consensus 545 ----------------------------~~--~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l 580 (852)
.+ +.-+..||-.+.+.+...+..|-=.|.++|-.+.
T Consensus 219 ~~~~~Ll~~L~e~~EW~Qi~IL~lL~~y~P~~~~e~~~il~~l~~~Lq~~N~AVVl~Aik~il~l~ 284 (746)
T PTZ00429 219 EWVNRLVYHLPECNEWGQLYILELLAAQRPSDKESAETLLTRVLPRMSHQNPAVVMGAIKVVANLA 284 (746)
T ss_pred HHHHHHHHHhhcCChHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhc
Confidence 00 1234456667777766666666556666666555
|
|
| >KOG2023|consensus | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0017 Score=75.27 Aligned_cols=215 Identities=17% Similarity=0.186 Sum_probs=146.4
Q ss_pred HHHhHHHHhhhhhhccCCcccc---cccchhhhHhhhhcCCCcccchhhhhhhcccCChhhhhcchhhhhhhcccc----
Q psy3914 334 IDKNKFFNGLASAIDKFPKLIS---CHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGS---- 406 (852)
Q Consensus 334 ~eK~~Ff~~L~~~l~~fP~~~~---~~kiLP~Ll~~~e~~~~~~~vL~~llki~~~l~~~ef~~~i~P~i~~LF~~---- 406 (852)
-|--+|.-.+.+.- +++.+. -.|++|.|+..+.+.+.-..+|. .....-+..+=.+.|.|.+.+-=..
T Consensus 274 LEACEFwla~aeqp--i~~~~L~p~l~kliPvLl~~M~Ysd~D~~LL~---~~eeD~~vpDreeDIkPRfhksk~~~~~~ 348 (885)
T KOG2023|consen 274 LEACEFWLALAEQP--ICKEVLQPYLDKLIPVLLSGMVYSDDDIILLK---NNEEDESVPDREEDIKPRFHKSKEHGNGE 348 (885)
T ss_pred HHHHHHHHHHhcCc--CcHHHHHHHHHHHHHHHHccCccccccHHHhc---CccccccCCchhhhccchhhhchhccCcc
Confidence 35566777766542 455444 24788999988888776443332 0111112223356777877664211
Q ss_pred ------------------CCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCC--
Q psy3914 407 ------------------NDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLN-- 466 (852)
Q Consensus 407 ------------------~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~-- 466 (852)
.|--.|-|=-..|+.++..+..+ +.+.+||+|...+......|||++|-++=.+|+-=-
T Consensus 349 ~~~~eDdddDe~DDdD~~~dWNLRkCSAAaLDVLanvf~~e-lL~~l~PlLk~~L~~~~W~vrEagvLAlGAIAEGcM~g 427 (885)
T KOG2023|consen 349 DADDEDDDDDEDDDDDAFSDWNLRKCSAAALDVLANVFGDE-LLPILLPLLKEHLSSEEWKVREAGVLALGAIAEGCMQG 427 (885)
T ss_pred ccccccccccccccccccccccHhhccHHHHHHHHHhhHHH-HHHHHHHHHHHHcCcchhhhhhhhHHHHHHHHHHHhhh
Confidence 11346766666777777767654 788999999999999999999999977666654211
Q ss_pred -ccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHH---HhhccCCChHHHHHHHHHHHHHhh
Q psy3914 467 -YNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAF---SRAMRDPFPPARNAGVLALAATQQ 542 (852)
Q Consensus 467 -~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af---~r~lkDp~~~~R~a~l~~l~~~~~ 542 (852)
...| .+|+|+|..+. .|+.+-||.-|+=-|++.++++-.+.+++.+.|.+ .|.+-|....+..||+.|++.+.+
T Consensus 428 ~~p~L-peLip~l~~~L-~DKkplVRsITCWTLsRys~wv~~~~~~~~f~pvL~~ll~~llD~NK~VQEAAcsAfAtleE 505 (885)
T KOG2023|consen 428 FVPHL-PELIPFLLSLL-DDKKPLVRSITCWTLSRYSKWVVQDSRDEYFKPVLEGLLRRLLDSNKKVQEAACSAFATLEE 505 (885)
T ss_pred cccch-HHHHHHHHHHh-ccCccceeeeeeeeHhhhhhhHhcCChHhhhHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 1111 37889998887 59999999999999999999988777777776655 455669989999999999887654
Q ss_pred ccCHHHHHHhHhhhhhhcc
Q psy3914 543 YFLLSEVAQRILPALCQLS 561 (852)
Q Consensus 543 ~~~~~~~a~~ILP~L~~l~ 561 (852)
+.++++.|+|.+.+
T Consensus 506 -----~A~~eLVp~l~~IL 519 (885)
T KOG2023|consen 506 -----EAGEELVPYLEYIL 519 (885)
T ss_pred -----hccchhHHHHHHHH
Confidence 34455556555443
|
|
| >KOG2023|consensus | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0014 Score=75.89 Aligned_cols=180 Identities=18% Similarity=0.185 Sum_probs=107.1
Q ss_pred hHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHHHH----------HHHHHHhhccC---------H-----HHH
Q psy3914 281 NLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDA----------LLFLEEIQMKD---------K-----IDK 336 (852)
Q Consensus 281 ~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv~~----------l~~Leel~~k~---------~-----~eK 336 (852)
++.++++.+.++|+.-|-++.+.++.... .|=|+|-++-. .+.+..+-+|. . .-|
T Consensus 14 ql~~lLk~s~Spn~~~~~~~~~~leq~~~-~pdfnnYL~~IL~~~~~~d~~~Rs~aGLlLKNnvr~~~~~~~~~~~~yiK 92 (885)
T KOG2023|consen 14 QLAQLLKNSQSPNSETRNNVQEKLEQFNL-FPDFNNYLIYILIRAKSEDVPTRSLAGLLLKNNVRGHYNSIPSEVLDYIK 92 (885)
T ss_pred HHHHHHHhccCCChHHHHHHHHHHHHHhc-ccchhceeeEEEecccccchhHHHHhhhhHhccccccccCCChHHHHHHH
Confidence 56788899999999998888888877654 34455433211 12222221111 1 223
Q ss_pred hHHHHhhhhhhc------------cCCcccc--cccchhhhHhhhhcCC--CcccchhhhhhhcccCC----h---hhhh
Q psy3914 337 NKFFNGLASAID------------KFPKLIS--CHKVLPQLINAFEYGE--AGASVLSPLFKIGQMLE----H---EDYQ 393 (852)
Q Consensus 337 ~~Ff~~L~~~l~------------~fP~~~~--~~kiLP~Ll~~~e~~~--~~~~vL~~llki~~~l~----~---~ef~ 393 (852)
...+++|.+.-. -+...-. ..-+||.|++.++..+ .-.-.+..+-||++... . +.+.
T Consensus 93 s~~l~~lgd~~~lIr~tvGivITTI~s~~~~~~wpelLp~L~~~L~s~d~n~~EgA~~AL~KIcEDsa~~lds~~~~rpl 172 (885)
T KOG2023|consen 93 SECLHGLGDASPLIRATVGIVITTIASTGGLQHWPELLPQLCELLDSPDYNTCEGAFGALQKICEDSAQFLDSDVLTRPL 172 (885)
T ss_pred HHHHhhccCchHHHHhhhhheeeeeecccccccchhHHHHHHHHhcCCcccccchhHHHHHHHHhhhHHHHhhhcccCch
Confidence 333333322100 0111111 2346788877776543 11123344445544321 1 3455
Q ss_pred cchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHH--hHhHHHHHHhhcCCCcHHHHHHHHHHHHHh
Q psy3914 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIV--NEQIFQQVALGFLDTNPTIREQTVKSIIHL 461 (852)
Q Consensus 394 ~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v--~~~I~P~l~~g~~D~~~~iRe~tlksi~~l 461 (852)
..++|.+..+|..+.+.||...+..+..|+-.-+.... .|+.+..++....|.++.||.+..++++.|
T Consensus 173 ~~mipkfl~f~~h~spkiRs~A~~cvNq~i~~~~qal~~~iD~Fle~lFalanD~~~eVRk~vC~alv~L 242 (885)
T KOG2023|consen 173 NIMIPKFLQFFKHPSPKIRSHAVGCVNQFIIIQTQALYVHIDKFLEILFALANDEDPEVRKNVCRALVFL 242 (885)
T ss_pred HHhHHHHHHHHhCCChhHHHHHHhhhhheeecCcHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHH
Confidence 67899999999999999998888877777766555433 456677788888899999998888776665
|
|
| >KOG0576|consensus | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.00013 Score=84.75 Aligned_cols=218 Identities=11% Similarity=0.054 Sum_probs=142.5
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCC-cceEeeeEEcCCCCeEEEEEeecccHHHHHHh
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPS-ILTFLDSVESPSKSLVYLAVEYVEPIFYHLDN 150 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPn-Ilk~~d~~e~~~~~~~yIVtE~v~~L~~~L~~ 150 (852)
.+++.++|+.+...+...+ .+.+... ....-++++|.+++||| .+.+++.++.+ .+..|+++++..-......
T Consensus 252 K~altknpKkRptaeklL~-h~fvs~~---l~~rl~~eLLdK~n~P~~~v~~~~d~~~E--~~~~i~~~i~s~~rs~~~~ 325 (829)
T KOG0576|consen 252 KGALTKNPKKRPTAEKLLQ-HPFVSQT---LSRRLAIELLDKVNNPNPVVRYLEDYDGE--DYLWIPMRICSTGRSSALE 325 (829)
T ss_pred HHHhcCCCccCCChhhhee-ceeeccc---hhhHHHHHHHHHccCCCCcccccccCCcc--cccchhhhhhcCCcccccc
Confidence 6788888887775555444 4544432 44566789999999999 77777777766 8899999998721111001
Q ss_pred hhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCC
Q psy3914 151 TLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQS 230 (852)
Q Consensus 151 ~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~ 230 (852)
....+..+.+.++.+++..-+++|+++| +--=+|+| ||+.++ +..|+++|+....+.... ......+++
T Consensus 326 ~~~se~~~~~~~~~~~~r~et~~l~~l~-~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-----~~~t~~~~~ 394 (829)
T KOG0576|consen 326 MTVSEIALEQYQFAYPLRKETRPLAELH-SSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-----KPRTAIGTP 394 (829)
T ss_pred CChhhHhhhhhhhhhhhhhhcccccccc-cccccCcc----cccccc-cccccccccCCcccCccc-----ccccCCCCC
Confidence 1111223445556677777788999999 44447887 666544 789999999876543321 234567888
Q ss_pred cccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccCc----CCC----------ChhHHHHHHHhccCCCCC
Q psy3914 231 TYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI----DNI----------PENLKRVYLELISERPNQ 296 (852)
Q Consensus 231 ~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~~----~~i----------p~~L~~li~~lL~~nP~~ 296 (852)
.++|||+.....+....|.|++|.-..++--|.+|.......... .+. |..-.++...|++.-|..
T Consensus 395 ~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~~~~~~~g~~p~s~~L~~~~aw~~~~~~~~~~~~~~g~P~~ 474 (829)
T KOG0576|consen 395 EPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPPAVLPMIGNGPNSPMLTDKSAWSPVFHRDFPAPCLNGLPPT 474 (829)
T ss_pred CCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCCccccCCCCCCCCccccchhhhcCcccccCCcccccCCCCCC
Confidence 999999998888888999999998777887776665321111000 000 111113556678888888
Q ss_pred CCCHHHHHHh
Q psy3914 297 RPNPADFIMR 306 (852)
Q Consensus 297 Rps~~elL~~ 306 (852)
|+.....+.+
T Consensus 475 pkv~mgacfs 484 (829)
T KOG0576|consen 475 PKVHMGACFS 484 (829)
T ss_pred CcchhhHHHH
Confidence 8777666554
|
|
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0042 Score=64.34 Aligned_cols=137 Identities=16% Similarity=0.119 Sum_probs=75.9
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCC--CcceEeeeEEcC-CCCeEEEEEeecc--cHHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHP--SILTFLDSVESP-SKSLVYLAVEYVE--PIFY 146 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHP--nIlk~~d~~e~~-~~~~~yIVtE~v~--~L~~ 146 (852)
.|....+|...... ..+++|..........+.+|+..++.|..- .+.+++...... .....|++|+++. ++..
T Consensus 7 ~G~~n~~~~v~~~~--~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 84 (239)
T PF01636_consen 7 GGFSNRVYRVTTDD--GRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDD 84 (239)
T ss_dssp ESSSSEEEEEEETT--SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHH
T ss_pred CCCeeeEEEEEECC--cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccc
Confidence 67788899998854 488899887643456778888888887532 355666543222 1145799999988 4555
Q ss_pred ----------------HHHhhhhc---CCCCCHHH----------HHH-----------HHHHHHH-HHHHHH------h
Q psy3914 147 ----------------HLDNTLKE---NNEKKQIY----------ISW-----------GIFQITR-ALSFLI------N 179 (852)
Q Consensus 147 ----------------~L~~~~~~---~~~l~e~~----------i~~-----------~l~QI~~-aL~fLH------~ 179 (852)
.|...... ........ ..+ .+..+.. .+..++ .
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (239)
T PF01636_consen 85 ELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALLPKPL 164 (239)
T ss_dssp TSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred cccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhhccCC
Confidence 11111011 00100000 000 0111222 333333 1
Q ss_pred cCCceecccCCCCEEEc-cCCcEEEcccchhh
Q psy3914 180 DADLRHNHVNHTSIFIN-SCGEWKLGGLEYME 210 (852)
Q Consensus 180 ~~~ivH~DIkp~NIlV~-~~g~~KL~DFg~a~ 210 (852)
...++|||++|.||+++ .+|.+-|+||+.+.
T Consensus 165 ~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 165 PPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp CEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred CcEEEEeccccccceeeeccceeEEEecccce
Confidence 34589999999999999 56667899999974
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0079 Score=62.14 Aligned_cols=122 Identities=15% Similarity=0.110 Sum_probs=85.6
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCC------------------chHHHHHHHHHHHhCC------CCCcceEeeeEE
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSAD------------------TYEPALSYVKKLKTLR------HPSILTFLDSVE 127 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~------------------~~~~~~~E~~~Lk~Lr------HPnIlk~~d~~e 127 (852)
.|+.-.||. +. .+...+||+..... ......+|+.....+. +.+|.+++++.+
T Consensus 11 ~G~~R~cy~--HP-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~ve 87 (199)
T PF10707_consen 11 QGGERDCYQ--HP-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYGFVE 87 (199)
T ss_pred cCCCceEEE--CC-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeEEEe
Confidence 777777873 33 34556789887622 2566778887777666 788999999999
Q ss_pred cCCCCeEEEEEeecc--------cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC
Q psy3914 128 SPSKSLVYLAVEYVE--------PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG 199 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--------~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g 199 (852)
++ .-..+|+|.+. +|.+++. .+.++. .+...+. +-..||- +.+|+.+||+|.||++...+
T Consensus 88 T~--~G~Glv~e~I~d~dG~~s~TL~~~l~-----~~~~~~-~~~~~L~---~f~~~l~-~~~Iv~~dl~~~NIv~~~~~ 155 (199)
T PF10707_consen 88 TN--LGLGLVVELIRDADGNISPTLEDYLK-----EGGLTE-ELRQALD---EFKRYLL-DHHIVIRDLNPHNIVVQRRD 155 (199)
T ss_pred cC--CceEEEEEEEECCCCCcCccHHHHHH-----cCCccH-HHHHHHH---HHHHHHH-HcCCeecCCCcccEEEEecC
Confidence 98 77899999986 3677662 244555 4444444 3445566 77899999999999997632
Q ss_pred ----cEEEcc-cch
Q psy3914 200 ----EWKLGG-LEY 208 (852)
Q Consensus 200 ----~~KL~D-Fg~ 208 (852)
.+.|+| ||.
T Consensus 156 ~~~~~lvlIDG~G~ 169 (199)
T PF10707_consen 156 SGEFRLVLIDGLGE 169 (199)
T ss_pred CCceEEEEEeCCCC
Confidence 355554 555
|
PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. |
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0015 Score=77.19 Aligned_cols=188 Identities=14% Similarity=0.225 Sum_probs=112.2
Q ss_pred ChhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc
Q psy3914 388 EHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNY 467 (852)
Q Consensus 388 ~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~ 467 (852)
...+....++|.|.++..++++-+|-..+-.+..+... .++.+.+.++|.+...+.|.++.|+.+++..+..+ +-+.
T Consensus 107 ~~~~~~~~l~~~v~~ll~~~~~~VRk~A~~~l~~i~~~-~p~~~~~~~~~~l~~lL~d~~~~V~~~a~~~l~~i--~~~~ 183 (526)
T PF01602_consen 107 RTPEMAEPLIPDVIKLLSDPSPYVRKKAALALLKIYRK-DPDLVEDELIPKLKQLLSDKDPSVVSAALSLLSEI--KCND 183 (526)
T ss_dssp -SHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHH-CHCCHHGGHHHHHHHHTTHSSHHHHHHHHHHHHHH--HCTH
T ss_pred cccchhhHHHHHHHHHhcCCchHHHHHHHHHHHHHhcc-CHHHHHHHHHHHHhhhccCCcchhHHHHHHHHHHH--ccCc
Confidence 35556677788888888888888876655555555555 33444333778888888888888888888777776 2222
Q ss_pred c---chhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhcc
Q psy3914 468 N---NLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYF 544 (852)
Q Consensus 468 ~---~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~ 544 (852)
+ .+-..+.+.+.++. .+.++-++++.+-+|.++++.-........+++.+...++.....++..++..+. ...
T Consensus 184 ~~~~~~~~~~~~~L~~~l-~~~~~~~q~~il~~l~~~~~~~~~~~~~~~~i~~l~~~l~s~~~~V~~e~~~~i~---~l~ 259 (526)
T PF01602_consen 184 DSYKSLIPKLIRILCQLL-SDPDPWLQIKILRLLRRYAPMEPEDADKNRIIEPLLNLLQSSSPSVVYEAIRLII---KLS 259 (526)
T ss_dssp HHHTTHHHHHHHHHHHHH-TCCSHHHHHHHHHHHTTSTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHS
T ss_pred chhhhhHHHHHHHhhhcc-cccchHHHHHHHHHHHhcccCChhhhhHHHHHHHHHHHhhccccHHHHHHHHHHH---Hhh
Confidence 2 22333344444443 4666667777777777766543322211345555555555444444444444333 323
Q ss_pred CHHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHH
Q psy3914 545 LLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGK 582 (852)
Q Consensus 545 ~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~ 582 (852)
....+...+++.|..++.+++.++|-.+++.|..+...
T Consensus 260 ~~~~~~~~~~~~L~~lL~s~~~nvr~~~L~~L~~l~~~ 297 (526)
T PF01602_consen 260 PSPELLQKAINPLIKLLSSSDPNVRYIALDSLSQLAQS 297 (526)
T ss_dssp SSHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHCCH
T ss_pred cchHHHHhhHHHHHHHhhcccchhehhHHHHHHHhhcc
Confidence 33336677777777777777777777776666665443
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. Clathrin coats contain both clathrin and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors []. All AP complexes are heterotetramers composed of two large subunits (adaptins), a medium subunit (mu) and a small subunit (sigma). Each subunit has a specific function. Adaptin subunits recognise and bind to clathrin through their hinge region (clathrin box), and recruit accessory proteins that modulate AP function through their C-terminal appendage domains. By contrast, GGAs are monomers composed of four domains, which have functions similar to AP subunits: an N-terminal VHS (Vps27p/Hrs/Stam) domain, a GAT (GGA and Tom1) domain, a hinge region, and a C-terminal GAE (gamma-adaptin ear) domain. The GAE domain is similar to the AP gamma-adaptin ear domain, being responsible for the recruitment of accessory proteins that regulate clathrin-mediated endocytosis []. While clathrin mediates endocytic protein transport from ER to Golgi, coatomers (COPI, COPII) primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the N-terminal domain of various adaptins from different AP clathrin adaptor complexes (including AP1, AP2, AP3 and AP4), and from the beta and gamma subunits of various coatomer (COP) adaptors. This domain has a 2-layer alpha/alpha fold that forms a right-handed superhelix, and is a member of the ARM repeat superfamily []. The N-terminal region of the various AP adaptor proteins share strong sequence identity; by contrast, the C-terminal domains of different adaptins share similar structural folds, but have little sequence identity []. It has been proposed that the N-terminal domain interacts with another uniform component of the coated vesicles. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 1W63_C 2JKR_A 2JKT_A 2XA7_A 2VGL_B 3TJZ_E. |
| >KOG2270|consensus | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0021 Score=70.81 Aligned_cols=128 Identities=12% Similarity=0.043 Sum_probs=93.4
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeC----------------------------CCchHHHHHHHHHHHhCCCCCcceEe
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDS----------------------------ADTYEPALSYVKKLKTLRHPSILTFL 123 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~----------------------------~~~~~~~~~E~~~Lk~LrHPnIlk~~ 123 (852)
.|-=..||.|+.. +|..+|||+|.. ....-.+..|++.|++|+.-+|.- -
T Consensus 154 TGKEANVYHat~~-dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP~-P 231 (520)
T KOG2270|consen 154 TGKEANVYHATEE-DGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIPC-P 231 (520)
T ss_pred cCccceeEeeecC-CCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCCC-C
Confidence 7788899999885 788899999876 011235678899999998777443 3
Q ss_pred eeEEcCCCCeEEEEEeecc-c--HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc
Q psy3914 124 DSVESPSKSLVYLAVEYVE-P--IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE 200 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~-~--L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~ 200 (852)
..+.- ....|||+++. + -.-.| .+..++...+..+-.|++.-+.-|-+.|++||.||.-=|+++ .+|.
T Consensus 232 ePIlL---k~hVLVM~FlGrdgw~aPkL-----Kd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly-hdG~ 302 (520)
T KOG2270|consen 232 EPILL---KNHVLVMEFLGRDGWAAPKL-----KDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLY-HDGK 302 (520)
T ss_pred Cceee---ecceEeeeeccCCCCcCccc-----ccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheE-ECCE
Confidence 33322 34689999998 1 11112 124566666777777888888888889999999999999999 5678
Q ss_pred EEEcccchhh
Q psy3914 201 WKLGGLEYME 210 (852)
Q Consensus 201 ~KL~DFg~a~ 210 (852)
+.++|.+-+.
T Consensus 303 lyiIDVSQSV 312 (520)
T KOG2270|consen 303 LYIIDVSQSV 312 (520)
T ss_pred EEEEEccccc
Confidence 8899988764
|
|
| >PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0018 Score=56.97 Aligned_cols=85 Identities=24% Similarity=0.370 Sum_probs=65.1
Q ss_pred HHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhh
Q psy3914 476 RHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILP 555 (852)
Q Consensus 476 ~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP 555 (852)
+.|.+...+|+++.||.+++-|||++. ....++.+...++|+.+.+|.+++.++..+. -.+.+|
T Consensus 2 ~~L~~~l~~~~~~~vr~~a~~~L~~~~--------~~~~~~~L~~~l~d~~~~vr~~a~~aL~~i~--------~~~~~~ 65 (88)
T PF13646_consen 2 PALLQLLQNDPDPQVRAEAARALGELG--------DPEAIPALIELLKDEDPMVRRAAARALGRIG--------DPEAIP 65 (88)
T ss_dssp HHHHHHHHTSSSHHHHHHHHHHHHCCT--------HHHHHHHHHHHHTSSSHHHHHHHHHHHHCCH--------HHHTHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHcC--------CHhHHHHHHHHHcCCCHHHHHHHHHHHHHhC--------CHHHHH
Confidence 444444446999999999999999553 2356788888899999999999999998653 256889
Q ss_pred hhhhcccCC-ChhhHHHHHHHH
Q psy3914 556 ALCQLSTDP-EKSVRDSAFKTI 576 (852)
Q Consensus 556 ~L~~l~~D~-~~~Vr~~a~~~i 576 (852)
.|..++.|. +..||..|..++
T Consensus 66 ~L~~~l~~~~~~~vr~~a~~aL 87 (88)
T PF13646_consen 66 ALIKLLQDDDDEVVREAAAEAL 87 (88)
T ss_dssp HHHHHHTC-SSHHHHHHHHHHH
T ss_pred HHHHHHcCCCcHHHHHHHHhhc
Confidence 999988775 457788888765
|
|
| >KOG0166|consensus | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.019 Score=66.32 Aligned_cols=238 Identities=15% Similarity=0.174 Sum_probs=173.6
Q ss_pred CCcccccccchhhhHhhhhcCCCccc---chhhhhhhcccC-Ch--hhhhcchhhhhhhccccCCHHHHHHHHHHHHHHH
Q psy3914 350 FPKLISCHKVLPQLINAFEYGEAGAS---VLSPLFKIGQML-EH--EDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFI 423 (852)
Q Consensus 350 fP~~~~~~kiLP~Ll~~~e~~~~~~~---vL~~llki~~~l-~~--~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~ 423 (852)
+..-+..+.+++.|+..+......+. +.=.+..++..- +. -+-.+.++|.|..|...+|..+..-.+--+..+.
T Consensus 186 ~Rd~vl~~g~l~pLl~~l~~~~~~~~lRn~tW~LsNlcrgk~P~P~~~~v~~iLp~L~~ll~~~D~~Vl~Da~WAlsyLs 265 (514)
T KOG0166|consen 186 CRDYVLSCGALDPLLRLLNKSDKLSMLRNATWTLSNLCRGKNPSPPFDVVAPILPALLRLLHSTDEEVLTDACWALSYLT 265 (514)
T ss_pred HHHHHHhhcchHHHHHHhccccchHHHHHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 44445567788888877766554222 222233444333 33 2446789999999999999999866666666666
Q ss_pred ccCC---hHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCcc---chhhhHHHHHHHHhccCCCcceeeehhhh
Q psy3914 424 GHVP---DAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYN---NLNVETLRHFARLQAKDDQGGIRTNTTVC 497 (852)
Q Consensus 424 ~~l~---~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~---~l~~~lL~~l~kl~~~D~~~~IR~nt~ic 497 (852)
+.-+ .-++.-.+.|.|+..+....+.|+--+|+++-.|+---++. .++..+||+|..+..+.+.-.||--++--
T Consensus 266 dg~ne~iq~vi~~gvv~~LV~lL~~~~~~v~~PaLRaiGNIvtG~d~QTq~vi~~~~L~~l~~ll~~s~~~~ikkEAcW~ 345 (514)
T KOG0166|consen 266 DGSNEKIQMVIDAGVVPRLVDLLGHSSPKVVTPALRAIGNIVTGSDEQTQVVINSGALPVLSNLLSSSPKESIKKEACWT 345 (514)
T ss_pred cCChHHHHHHHHccchHHHHHHHcCCCcccccHHHhhccceeeccHHHHHHHHhcChHHHHHHHhccCcchhHHHHHHHH
Confidence 6654 44577789999999999999999999999998887665543 36777899999998767777799888888
Q ss_pred hcccccccChhhHHHH----HHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHH----HHHhHhhhhhhcccCCChhhH
Q psy3914 498 VGKIAHHLHPQIRQKV----LISAFSRAMRDPFPPARNAGVLALAATQQYFLLSE----VAQRILPALCQLSTDPEKSVR 569 (852)
Q Consensus 498 lgkia~~L~~~~~~~v----Li~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~----~a~~ILP~L~~l~~D~~~~Vr 569 (852)
|+.|... .++..+.| |+|.+.+.|.......|..|.-++.-...--+.+. +-.-|||.+|-++.-+...+=
T Consensus 346 iSNItAG-~~~qiqaVida~l~p~Li~~l~~~ef~~rKEAawaIsN~ts~g~~~qi~yLv~~giI~plcdlL~~~D~~ii 424 (514)
T KOG0166|consen 346 ISNITAG-NQEQIQAVIDANLIPVLINLLQTAEFDIRKEAAWAISNLTSSGTPEQIKYLVEQGIIKPLCDLLTCPDVKII 424 (514)
T ss_pred HHHhhcC-CHHHHHHHHHcccHHHHHHHHhccchHHHHHHHHHHHhhcccCCHHHHHHHHHcCCchhhhhcccCCChHHH
Confidence 8888873 23344444 57888888888888999999999875554444443 456699999999987765555
Q ss_pred HHHHHHHHHHHHHHhhhcc
Q psy3914 570 DSAFKTIKGFLGKLEQVSE 588 (852)
Q Consensus 570 ~~a~~~i~~~l~~le~~~~ 588 (852)
..++..+..++..-|...+
T Consensus 425 ~v~Ld~l~nil~~~e~~~~ 443 (514)
T KOG0166|consen 425 LVALDGLENILKVGEAEKN 443 (514)
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 5788888888888887764
|
|
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.082 Score=64.88 Aligned_cols=260 Identities=11% Similarity=0.094 Sum_probs=147.3
Q ss_pred CCCCcchHH-HHHHHHHHhhccCHHHHhHHHHhhhhhhccCCcccccccchhhhHhhhhcCCCcccchhh--hhhhcccC
Q psy3914 311 GGYFKNDLI-DALLFLEEIQMKDKIDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSP--LFKIGQML 387 (852)
Q Consensus 311 ~~fF~n~lv-~~l~~Leel~~k~~~eK~~Ff~~L~~~l~~fP~~~~~~kiLP~Ll~~~e~~~~~~~vL~~--llki~~~l 387 (852)
..||...-- +....-..+...+..+|...++.+-.... -+.-...+.|..++.+...+.--+-|.. +...++.-
T Consensus 23 ~~~f~~~~kge~~ELr~~L~s~~~~~kk~alKkvIa~mt---~G~DvS~LF~dVvk~~~S~d~elKKLvYLYL~~ya~~~ 99 (746)
T PTZ00429 23 SKYFAQTRRGEGAELQNDLNGTDSYRKKAAVKRIIANMT---MGRDVSYLFVDVVKLAPSTDLELKKLVYLYVLSTARLQ 99 (746)
T ss_pred cccccccccchHHHHHHHHHCCCHHHHHHHHHHHHHHHH---CCCCchHHHHHHHHHhCCCCHHHHHHHHHHHHHHcccC
Confidence 457743211 22222344555566677666665543321 1122233445555544333211111111 11222211
Q ss_pred ChhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc
Q psy3914 388 EHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNY 467 (852)
Q Consensus 388 ~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~ 467 (852)
.|-.-.++..+.+-+.++++.+|-..|+.|.. +....+.+.+++.+.+++.|.+|-||..++-++..|...-.+
T Consensus 100 --pelalLaINtl~KDl~d~Np~IRaLALRtLs~----Ir~~~i~e~l~~~lkk~L~D~~pYVRKtAalai~Kly~~~pe 173 (746)
T PTZ00429 100 --PEKALLAVNTFLQDTTNSSPVVRALAVRTMMC----IRVSSVLEYTLEPLRRAVADPDPYVRKTAAMGLGKLFHDDMQ 173 (746)
T ss_pred --hHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHc----CCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhCcc
Confidence 22234567888888899999999888876654 444667888999999999999999999999999988765443
Q ss_pred cchhhhHHHHHHHHhccCCCcceeeehhhhhcccccc---------------------cChhhHH---------------
Q psy3914 468 NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHH---------------------LHPQIRQ--------------- 511 (852)
Q Consensus 468 ~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~---------------------L~~~~~~--------------- 511 (852)
......+++.+.++. .|.++.|..|++..|..|... ++.|..-
T Consensus 174 lv~~~~~~~~L~~LL-~D~dp~Vv~nAl~aL~eI~~~~~~~l~l~~~~~~~Ll~~L~e~~EW~Qi~IL~lL~~y~P~~~~ 252 (746)
T PTZ00429 174 LFYQQDFKKDLVELL-NDNNPVVASNAAAIVCEVNDYGSEKIESSNEWVNRLVYHLPECNEWGQLYILELLAAQRPSDKE 252 (746)
T ss_pred cccccchHHHHHHHh-cCCCccHHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHHhhcCChHHHHHHHHHHHhcCCCCcH
Confidence 332345677777775 699999999998888777543 1222111
Q ss_pred --HHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCH---HHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHH
Q psy3914 512 --KVLISAFSRAMRDPFPPARNAGVLALAATQQYFLL---SEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLG 581 (852)
Q Consensus 512 --~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~---~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~ 581 (852)
..++..+...|+-..+.+.++++..+.....+... ..+..++-+.|..|+ ....++|--+++.|..++.
T Consensus 253 e~~~il~~l~~~Lq~~N~AVVl~Aik~il~l~~~~~~~~~~~~~~rl~~pLv~L~-ss~~eiqyvaLr~I~~i~~ 326 (746)
T PTZ00429 253 SAETLLTRVLPRMSHQNPAVVMGAIKVVANLASRCSQELIERCTVRVNTALLTLS-RRDAETQYIVCKNIHALLV 326 (746)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhh-CCCccHHHHHHHHHHHHHH
Confidence 11122222223333345555666555544433332 345556656555553 3445677777766655544
|
|
| >KOG2259|consensus | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.048 Score=63.74 Aligned_cols=192 Identities=16% Similarity=0.176 Sum_probs=125.5
Q ss_pred hhhhcccCChhhhhc-chhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHH
Q psy3914 380 LFKIGQMLEHEDYQA-KIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSI 458 (852)
Q Consensus 380 llki~~~l~~~ef~~-~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi 458 (852)
.+-+|-.-+.-++.. ...-++..++...|..+|-..++-|=.+-+.+. +...++-..+..+.|....||-++|+.+
T Consensus 182 ~~~lg~~~ss~~~d~~~~~~~l~~~~~~~D~~Vrt~A~eglL~L~eg~k---L~~~~Y~~A~~~lsD~~e~VR~aAvqlv 258 (823)
T KOG2259|consen 182 HLPLGVSPSSLTHDREHAARGLIYLEHDQDFRVRTHAVEGLLALSEGFK---LSKACYSRAVKHLSDDYEDVRKAAVQLV 258 (823)
T ss_pred hhhcccCCCcccccHHHHHHHHHHHhcCCCcchHHHHHHHHHhhccccc---ccHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 344554444444433 344558999999999999777776555555333 4455677788999999999999999988
Q ss_pred HHhcccC--C------ccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccc---cChhhHHHHH-------------
Q psy3914 459 IHLAPKL--N------YNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHH---LHPQIRQKVL------------- 514 (852)
Q Consensus 459 ~~l~~kl--~------~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~---L~~~~~~~vL------------- 514 (852)
......- . +..+....+..++... .|-++.||+-++..||.+-.. +-.++-.|-|
T Consensus 259 ~v~gn~~p~~~e~e~~e~kl~D~aF~~vC~~v-~D~sl~VRV~AaK~lG~~~~vSee~i~QTLdKKlms~lRRkr~ahkr 337 (823)
T KOG2259|consen 259 SVWGNRCPAPLERESEEEKLKDAAFSSVCRAV-RDRSLSVRVEAAKALGEFEQVSEEIIQQTLDKKLMSRLRRKRTAHKR 337 (823)
T ss_pred HHHHhcCCCcccchhhhhhhHHHHHHHHHHHH-hcCceeeeehHHHHhchHHHhHHHHHHHHHHHHHhhhhhhhhhcccc
Confidence 7665443 1 2223344566666665 699999999999999976531 1112211111
Q ss_pred -------------------------------------HHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhh
Q psy3914 515 -------------------------------------ISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPAL 557 (852)
Q Consensus 515 -------------------------------------i~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L 557 (852)
+.||+..+-|-|.++|.||+.++......= -..|.+-|=.|
T Consensus 338 pk~l~s~GewSsGk~~~advpsee~d~~~~siI~sGACGA~VhGlEDEf~EVR~AAV~Sl~~La~ss--P~FA~~aldfL 415 (823)
T KOG2259|consen 338 PKALYSSGEWSSGKEWNADVPSEEDDEEEESIIPSGACGALVHGLEDEFYEVRRAAVASLCSLATSS--PGFAVRALDFL 415 (823)
T ss_pred hHHHHhcCCcccCccccccCchhhccccccccccccccceeeeechHHHHHHHHHHHHHHHHHHcCC--CCcHHHHHHHH
Confidence 247788889999999999999876543311 12345556666
Q ss_pred hhcccCCChhhHHHHHHHHH
Q psy3914 558 CQLSTDPEKSVRDSAFKTIK 577 (852)
Q Consensus 558 ~~l~~D~~~~Vr~~a~~~i~ 577 (852)
.-|+.|.--.||-+|..++.
T Consensus 416 vDMfNDE~~~VRL~ai~aL~ 435 (823)
T KOG2259|consen 416 VDMFNDEIEVVRLKAIFALT 435 (823)
T ss_pred HHHhccHHHHHHHHHHHHHH
Confidence 66666666666665554443
|
|
| >KOG0213|consensus | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.058 Score=63.65 Aligned_cols=278 Identities=15% Similarity=0.174 Sum_probs=0.0
Q ss_pred hHHHHHHHHHhCCCCCCCCccccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHHHHHHHHHHhhc
Q psy3914 251 GLGILIWEVFNGPLQSTNRKSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQM 330 (852)
Q Consensus 251 SLG~ll~el~tG~~pf~~~~~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv~~l~~Leel~~ 330 (852)
+||.+.-++.....|| +|.-...++.++-++.|.-|-.+.+++..+ ..-+..
T Consensus 781 gfg~V~~~lg~r~kpy-----------lpqi~stiL~rLnnksa~vRqqaadlis~l-----------------a~Vlkt 832 (1172)
T KOG0213|consen 781 GFGTVVNALGGRVKPY-----------LPQICSTILWRLNNKSAKVRQQAADLISSL-----------------AKVLKT 832 (1172)
T ss_pred hHHHHHHHHhhccccc-----------hHHHHHHHHHHhcCCChhHHHHHHHHHHHH-----------------HHHHHh
Q ss_pred cCHHHHhHHHHh-hhhhhccCCcccccccchhhhHhhhhcCCCcccchhhhhhhcccCChhhhhcchhhhhhhccccCCH
Q psy3914 331 KDKIDKNKFFNG-LASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDR 409 (852)
Q Consensus 331 k~~~eK~~Ff~~-L~~~l~~fP~~~~~~kiLP~Ll~~~e~~~~~~~vL~~llki~~~l~~~ef~~~i~P~i~~LF~~~dr 409 (852)
..+++-...+.. |.+.|..--++ +|+.+|.++. .+..+.-..+..++ .+.|+|.|.++..+...
T Consensus 833 c~ee~~m~~lGvvLyEylgeeypE-----vLgsILgAik-------aI~nvigm~km~pP---i~dllPrltPILknrhe 897 (1172)
T KOG0213|consen 833 CGEEKLMGHLGVVLYEYLGEEYPE-----VLGSILGAIK-------AIVNVIGMTKMTPP---IKDLLPRLTPILKNRHE 897 (1172)
T ss_pred ccHHHHHHHhhHHHHHhcCcccHH-----HHHHHHHHHH-------HHHHhccccccCCC---hhhhcccchHhhhhhHH
Q ss_pred HHHHHHHHHHHHHHccCChHHHhH---hHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCC
Q psy3914 410 ATRSRLLLQLEHFIGHVPDAIVNE---QIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDD 486 (852)
Q Consensus 410 ~iR~~LL~~L~~~~~~l~~~~v~~---~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~ 486 (852)
.|-..-+.-+..+.++-+..+--. .|-=-|+..+...+..||.+|+.++=.|+.-+. -.++|-.|.... +-+
T Consensus 898 KVqen~IdLvg~IadrgpE~v~aREWMRIcfeLlelLkahkK~iRRaa~nTfG~IakaIG----PqdVLatLlnnL-kvq 972 (1172)
T KOG0213|consen 898 KVQENCIDLVGTIADRGPEYVSAREWMRICFELLELLKAHKKEIRRAAVNTFGYIAKAIG----PQDVLATLLNNL-KVQ 972 (1172)
T ss_pred HHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhcC----HHHHHHHHHhcc-hHH
Q ss_pred CcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccC--HHHHHHhHhhhhhhcccCC
Q psy3914 487 QGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFL--LSEVAQRILPALCQLSTDP 564 (852)
Q Consensus 487 ~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~--~~~~a~~ILP~L~~l~~D~ 564 (852)
+-.-|+-|++-|+-++++-++-+ .+||+..--+-|+.-+-...+.++..+-+|-+ ..+..-.|+|.|.-.++|.
T Consensus 973 eRq~RvcTtvaIaIVaE~c~pFt----VLPalmneYrtPe~nVQnGVLkalsf~FeyigemskdYiyav~PlleDAlmDr 1048 (1172)
T KOG0213|consen 973 ERQNRVCTTVAIAIVAETCGPFT----VLPALMNEYRTPEANVQNGVLKALSFMFEYIGEMSKDYIYAVTPLLEDALMDR 1048 (1172)
T ss_pred HHHhchhhhhhhhhhhhhcCchh----hhHHHHhhccCchhHHHHhHHHHHHHHHHHHHHHhhhHHHHhhHHHHHhhccc
Q ss_pred ChhhHHHHHHHHHHHH
Q psy3914 565 EKSVRDSAFKTIKGFL 580 (852)
Q Consensus 565 ~~~Vr~~a~~~i~~~l 580 (852)
.+..|+.|..+|+.+.
T Consensus 1049 D~vhRqta~~~I~Hl~ 1064 (1172)
T KOG0213|consen 1049 DLVHRQTAMNVIKHLA 1064 (1172)
T ss_pred cHHHHHHHHHHHHHHh
|
|
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.013 Score=58.78 Aligned_cols=119 Identities=10% Similarity=0.069 Sum_probs=86.4
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcc-eEeeeEEcCCCCeEEEEEeecc--cHHHHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSIL-TFLDSVESPSKSLVYLAVEYVE--PIFYHL 148 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIl-k~~d~~e~~~~~~~yIVtE~v~--~L~~~L 148 (852)
.|..+.||.|.. .|..+++|+-..+.....+..|+++|..+.--++- +++.+.+ .+++|||+. +|...-
T Consensus 32 KG~~s~Vyl~~~--~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~------~~i~me~i~G~~L~~~~ 103 (201)
T COG2112 32 KGTTSVVYLGEW--RGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYGE------DFIRMEYIDGRPLGKLE 103 (201)
T ss_pred cccccEEEEeec--cCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEech------hhhhhhhhcCcchhhhh
Confidence 899999999998 46699999988878888999999999999866554 4444433 346699998 565543
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccC-CCCEEEccCCcEEEcccchhh
Q psy3914 149 DNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVN-HTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 149 ~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIk-p~NIlV~~~g~~KL~DFg~a~ 210 (852)
. ..+ ..-+..+++. .|.-+..||-|+.|+ |.-+++..++++.|+||+-++
T Consensus 104 ~-------~~~----rk~l~~vlE~-a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At 154 (201)
T COG2112 104 I-------GGD----RKHLLRVLEK-AYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSAT 154 (201)
T ss_pred h-------ccc----HHHHHHHHHH-HHHHHHhccchhhhcCCceeEEecCCcEEEEEccchh
Confidence 1 012 2234456666 444448899999997 555555566699999999987
|
|
| >cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0085 Score=63.28 Aligned_cols=65 Identities=12% Similarity=-0.005 Sum_probs=39.1
Q ss_pred CCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCC---CcceEeeeEEcCC-CCeEEEEEeecc
Q psy3914 73 HTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHP---SILTFLDSVESPS-KSLVYLAVEYVE 142 (852)
Q Consensus 73 Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHP---nIlk~~d~~e~~~-~~~~yIVtE~v~ 142 (852)
|....||.. +..+.+|+.........+.+|++.|..|... .+.+++...+... ....|++||++.
T Consensus 9 G~~n~vy~~-----~~~~VlR~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~ 77 (235)
T cd05155 9 GTDNATFRL-----GDDMSVRLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE 77 (235)
T ss_pred CcccceEEc-----CCceEEEcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence 444457765 2246677766544456789999999888632 3455555443321 124578899876
|
The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista |
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.027 Score=74.74 Aligned_cols=219 Identities=11% Similarity=0.134 Sum_probs=157.7
Q ss_pred cccchhhhHhhhhcCCCc--ccchhhhhhhcccCChhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHh-
Q psy3914 356 CHKVLPQLINAFEYGEAG--ASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVN- 432 (852)
Q Consensus 356 ~~kiLP~Ll~~~e~~~~~--~~vL~~llki~~~l~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~- 432 (852)
..-++|.|++.+..+... -.++..|+.+...-+ ..+++.++.|+...+..+....|+-+..+....+.+.+.
T Consensus 528 ~aGAIppLV~LL~sgd~~~q~~Aa~AL~nLi~~~d-----~~~I~~Lv~LLlsdd~~~~~~aL~vLgnIlsl~~~~d~~~ 602 (2102)
T PLN03200 528 SAGAVPALLWLLKNGGPKGQEIAAKTLTKLVRTAD-----AATISQLTALLLGDLPESKVHVLDVLGHVLSVASLEDLVR 602 (2102)
T ss_pred HCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhccc-----hhHHHHHHHHhcCCChhHHHHHHHHHHHHHhhcchhHHHH
Confidence 346788888888766421 123344444433322 235577889999999888877788777776666554422
Q ss_pred -----HhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc---cchhhhHHHHHHHHhccCCCcceeeehhhhhcccccc
Q psy3914 433 -----EQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNY---NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHH 504 (852)
Q Consensus 433 -----~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~---~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~ 504 (852)
...+|.|...+...++.+++.++..+..++.-=.+ ..+....++.+..+. ....-.||..++.+|+.+...
T Consensus 603 ~g~~~~ggL~~Lv~LL~sgs~~ikk~Aa~iLsnL~a~~~d~~~avv~agaIpPLV~LL-ss~~~~v~keAA~AL~nL~~~ 681 (2102)
T PLN03200 603 EGSAANDALRTLIQLLSSSKEETQEKAASVLADIFSSRQDLCESLATDEIINPCIKLL-TNNTEAVATQSARALAALSRS 681 (2102)
T ss_pred HhhhccccHHHHHHHHcCCCHHHHHHHHHHHHHHhcCChHHHHHHHHcCCHHHHHHHH-hcCChHHHHHHHHHHHHHHhC
Confidence 35789999999999999999999888877652111 122334566666665 367778999999999999976
Q ss_pred cChhhHHHH----HHHHHHhhccCCChHHHHHHHHHHHHHhhccCHH--HHHHhHhhhhhhcccCCChhhHHHHHHHHHH
Q psy3914 505 LHPQIRQKV----LISAFSRAMRDPFPPARNAGVLALAATQQYFLLS--EVAQRILPALCQLSTDPEKSVRDSAFKTIKG 578 (852)
Q Consensus 505 L~~~~~~~v----Li~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~--~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~ 578 (852)
.....+..+ .+|++..+|+++...++..++.+|+.+...-+.. .....++|.|..++-+.+..+|..|..++..
T Consensus 682 ~~~~q~~~~v~~GaV~pL~~LL~~~d~~v~e~Al~ALanLl~~~e~~~ei~~~~~I~~Lv~lLr~G~~~~k~~Aa~AL~~ 761 (2102)
T PLN03200 682 IKENRKVSYAAEDAIKPLIKLAKSSSIEVAEQAVCALANLLSDPEVAAEALAEDIILPLTRVLREGTLEGKRNAARALAQ 761 (2102)
T ss_pred CCHHHHHHHHHcCCHHHHHHHHhCCChHHHHHHHHHHHHHHcCchHHHHHHhcCcHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 555443332 4788999999999999999999998887776533 3667889999999999999999977776654
Q ss_pred HH
Q psy3914 579 FL 580 (852)
Q Consensus 579 ~l 580 (852)
+.
T Consensus 762 L~ 763 (2102)
T PLN03200 762 LL 763 (2102)
T ss_pred HH
Confidence 43
|
|
| >PLN02876 acyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.021 Score=71.57 Aligned_cols=71 Identities=10% Similarity=0.055 Sum_probs=47.8
Q ss_pred cCCceEEEEEEEcCCC--eEEEEEEEeCC---CchHHHHHHHHHHHhCC-CCCc--ceEeeeEEcCC-CCeEEEEEeecc
Q psy3914 72 KHTFWKFHGGKKKGSN--EKVTIFLNDSA---DTYEPALSYVKKLKTLR-HPSI--LTFLDSVESPS-KSLVYLAVEYVE 142 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g--~~VaVKv~~~~---~~~~~~~~E~~~Lk~Lr-HPnI--lk~~d~~e~~~-~~~~yIVtE~v~ 142 (852)
.|.+..+|.......+ ..+.+++.... .....+.+|+++|+.|. |++| .+++.++++.+ -+..|+||||+.
T Consensus 48 gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~ 127 (822)
T PLN02876 48 HGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLE 127 (822)
T ss_pred CCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecC
Confidence 5666777777654332 46667765441 23357889999999996 6665 77777776531 135789999987
|
|
| >cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.027 Score=59.24 Aligned_cols=30 Identities=23% Similarity=0.212 Sum_probs=26.8
Q ss_pred CCceecccCCCCEEEcc-CCcEEEcccchhh
Q psy3914 181 ADLRHNHVNHTSIFINS-CGEWKLGGLEYME 210 (852)
Q Consensus 181 ~~ivH~DIkp~NIlV~~-~g~~KL~DFg~a~ 210 (852)
..++|+|+++.||+++. ++.+.|+||+++.
T Consensus 170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~ 200 (235)
T cd05157 170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG 200 (235)
T ss_pred EEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence 35899999999999998 5789999999975
|
ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo |
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0085 Score=72.68 Aligned_cols=185 Identities=19% Similarity=0.223 Sum_probs=113.7
Q ss_pred chhhhhhhccccCCHHHHHHHH---HHHHHHHccCChHHHhHhHHHHHHhhcCCC---cHHHHHHHHHHHHHhcccC---
Q psy3914 395 KIVPCVVKLFGSNDRATRSRLL---LQLEHFIGHVPDAIVNEQIFQQVALGFLDT---NPTIREQTVKSIIHLAPKL--- 465 (852)
Q Consensus 395 ~i~P~i~~LF~~~dr~iR~~LL---~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~---~~~iRe~tlksi~~l~~kl--- 465 (852)
=|+|.++||..++-+..|-.|. .++-.+-+-+..+.|++...-.+++-+.+. .+.-|-.+.=-+..|+.-+
T Consensus 512 GIFPYVLKLLQS~a~ELrpiLVFIWAKILAvD~SCQ~dLvKe~g~~YF~~vL~~~~~~~~EqrtmaAFVLAviv~nf~lG 591 (1387)
T KOG1517|consen 512 GIFPYVLKLLQSSARELRPILVFIWAKILAVDPSCQADLVKENGYKYFLQVLDPSQAIPPEQRTMAAFVLAVIVRNFKLG 591 (1387)
T ss_pred chHHHHHHHhccchHhhhhhHHHHHHHHHhcCchhHHHHHhccCceeEEEEecCcCCCCHHHHHHHHHHHHHHHcccchh
Confidence 4789999999999888774332 333333344556667777666666666551 2233333322222232222
Q ss_pred CccchhhhHHHHHHHHhccC-CCcceeeehhhhhcccccccChhhHHHHHHHH---HHhhccCCChHHHHHHHHHHHHHh
Q psy3914 466 NYNNLNVETLRHFARLQAKD-DQGGIRTNTTVCVGKIAHHLHPQIRQKVLISA---FSRAMRDPFPPARNAGVLALAATQ 541 (852)
Q Consensus 466 ~~~~l~~~lL~~l~kl~~~D-~~~~IR~nt~iclgkia~~L~~~~~~~vLi~a---f~r~lkDp~~~~R~a~l~~l~~~~ 541 (852)
-+..++..|+-. +--+.+| +.+-.|..++||||+|=..++..--...=..| +...|+||-+++|.||+.||..+.
T Consensus 592 Q~acl~~~li~i-Cle~lnd~~~pLLrQW~~icLG~LW~d~~~Arw~G~r~~AhekL~~~LsD~vpEVRaAAVFALgtfl 670 (1387)
T KOG1517|consen 592 QKACLNGNLIGI-CLEHLNDDPEPLLRQWLCICLGRLWEDYDEARWSGRRDNAHEKLILLLSDPVPEVRAAAVFALGTFL 670 (1387)
T ss_pred HHHhccccHHHH-HHHHhcCCccHHHHHHHHHHHHHHhhhcchhhhccccccHHHHHHHHhcCccHHHHHHHHHHHHHHh
Confidence 134456666663 3333356 47889999999999998877653111111112 234689999999999999998877
Q ss_pred hc----cCHH--------------HHHHhHhh----hhhhcccCCChhhHHHHHHHHHHHH
Q psy3914 542 QY----FLLS--------------EVAQRILP----ALCQLSTDPEKSVRDSAFKTIKGFL 580 (852)
Q Consensus 542 ~~----~~~~--------------~~a~~ILP----~L~~l~~D~~~~Vr~~a~~~i~~~l 580 (852)
.. |+-. .....+++ .+..++.|-...||.+..-++..|+
T Consensus 671 ~~~~d~fde~~~~~~~~~~l~~~~~~~E~~i~~~~~~ll~~vsdgsplvr~ev~v~ls~~~ 731 (1387)
T KOG1517|consen 671 SNGSDNFDEQTLVVEEEIDLDDERTSIEDLIIKGLMSLLALVSDGSPLVRTEVVVALSHFV 731 (1387)
T ss_pred cccccccchhhhhhhhhhcchhhhhhHHHHHHhhHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 65 3311 11344445 6778888999999997666555443
|
|
| >COG5218 YCG1 Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.032 Score=64.23 Aligned_cols=167 Identities=16% Similarity=0.253 Sum_probs=109.8
Q ss_pred CChhhhhcchhhhhhhccccCC-HHHHHHHHHHHHHHHc----cCCh-HHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHH
Q psy3914 387 LEHEDYQAKIVPCVVKLFGSND-RATRSRLLLQLEHFIG----HVPD-AIVNEQIFQQVALGFLDTNPTIREQTVKSIIH 460 (852)
Q Consensus 387 l~~~ef~~~i~P~i~~LF~~~d-r~iR~~LL~~L~~~~~----~l~~-~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~ 460 (852)
+++++|...++-.+-.+.++.. +.+--.+|..+-.|+. ..+. ..+-+.+|-++++|....+..||-.++.-+..
T Consensus 38 ~t~~~f~~~flr~vn~IL~~Kk~~si~dRil~fl~~f~~Y~~~~dpeg~~~V~~~~~h~lRg~eskdk~VR~r~lqila~ 117 (885)
T COG5218 38 LTAHEFSEEFLRVVNTILACKKNPSIPDRILSFLKRFFEYDMPDDPEGEELVAGTFYHLLRGTESKDKKVRKRSLQILAL 117 (885)
T ss_pred HHHHhhHHHHHHHHHHhhccccCCCcHHHHHHHHHHHHHhcCCCChhhhHHHHHHHHHHHhcccCcchhHHHHHHHHHHH
Confidence 4777777766666555555533 2232223333334444 3344 57888999999999999999999888876665
Q ss_pred hcccC---CccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccc-cChhhHHHHHHHHHHhhccCCChHHHHHHHHH
Q psy3914 461 LAPKL---NYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHH-LHPQIRQKVLISAFSRAMRDPFPPARNAGVLA 536 (852)
Q Consensus 461 l~~kl---~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~-L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~ 536 (852)
+..-+ ++.-.|.-+.+...++. |.++.||.-+..||.+...- ++++++-.-++.+.++ .||..++|-+|++.
T Consensus 118 ~~d~v~eIDe~l~N~L~ekl~~R~~--DRE~~VR~eAv~~L~~~Qe~~~neen~~~n~l~~~vq--nDPS~EVRr~alln 193 (885)
T COG5218 118 LSDVVREIDEVLANGLLEKLSERLF--DREKAVRREAVKVLCYYQEMELNEENRIVNLLKDIVQ--NDPSDEVRRLALLN 193 (885)
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHh--cchHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHh--cCcHHHHHHHHHHH
Confidence 55444 44444444455556665 99999999999999998864 4445544444444443 79999999999998
Q ss_pred HHHHhhccC--------H-----HHHHHhHhhhh
Q psy3914 537 LAATQQYFL--------L-----SEVAQRILPAL 557 (852)
Q Consensus 537 l~~~~~~~~--------~-----~~~a~~ILP~L 557 (852)
+..--..++ + .-+-.++||-+
T Consensus 194 i~vdnsT~p~IlERarDv~~anRr~vY~r~Lp~i 227 (885)
T COG5218 194 ISVDNSTYPCILERARDVSGANRRMVYERCLPRI 227 (885)
T ss_pred eeeCCCcchhHHHHhhhhhHHHHHHHHHHHhhhh
Confidence 754333222 1 13567889887
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 852 | ||||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 1e-04 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 3e-04 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 3e-04 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 3e-04 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 4e-04 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 5e-04 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 6e-04 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 6e-04 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 6e-04 |
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 852 | |||
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 4e-26 | |
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 2e-18 | |
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 8e-17 | |
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 2e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-11 | |
| 2qk2_A | 242 | LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 | 1e-07 | |
| 2qk2_A | 242 | LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 | 2e-04 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 6e-07 | |
| 1u6g_C | 1230 | TIP120 protein, CAND1; cullin repeat, heat repeat, | 2e-06 | |
| 1u6g_C | 1230 | TIP120 protein, CAND1; cullin repeat, heat repeat, | 5e-04 | |
| 2db0_A | 253 | 253AA long hypothetical protein; heat repeats, hel | 3e-06 | |
| 2of3_A | 266 | ZYG-9; multifunctional macromolecule, kinetochore, | 3e-06 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 3e-06 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 1e-05 | |
| 4fdd_A | 852 | Transportin-1; heat repeats, karyopherin, nuclear | 4e-05 | |
| 4fdd_A | 852 | Transportin-1; heat repeats, karyopherin, nuclear | 8e-04 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 9e-05 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 1e-04 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 1e-04 | |
| 3oqs_A | 510 | Importin subunit alpha-2; importin alpha, karyophe | 2e-04 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 2e-04 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 3e-04 | |
| 1oyz_A | 280 | Hypothetical protein YIBA; structural genomics, PS | 4e-04 | |
| 1qgr_A | 876 | Protein (importin beta subunit); transport recepto | 7e-04 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 8e-04 | |
| 3lvg_D | 190 | LCB, clathrin light chain B; SELF assembly, coated | 8e-04 |
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
Score = 113 bits (283), Expect = 4e-26
Identities = 40/242 (16%), Positives = 84/242 (34%), Gaps = 7/242 (2%)
Query: 342 GLASAIDKFPKLI----SCHKVLPQLINAF--EYGEAGASVLSPLFKIGQMLEHEDYQAK 395
LAS I ++ + +LP + E E +++S L + +++
Sbjct: 343 ALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQS 402
Query: 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTV 455
++P +V+L R ++ + G + +E++ +D IRE
Sbjct: 403 LLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAAT 462
Query: 456 KSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLI 515
++ L K + + + + D R T C+ ++ I K ++
Sbjct: 463 SNLKKLVEKFGKEWAHATIIPKVLAM-SGDPNYLHRMTTLFCINVLSEVCGQDITTKHML 521
Query: 516 SAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKT 575
R DP R +L S + + P L +L+ D + V+ A +
Sbjct: 522 PTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEA 581
Query: 576 IK 577
+
Sbjct: 582 LT 583
|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
Score = 88.9 bits (220), Expect = 2e-18
Identities = 39/294 (13%), Positives = 98/294 (33%), Gaps = 15/294 (5%)
Query: 314 FKNDLIDALLFLEEIQMKDKIDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYG--- 370
K DL+ A L ++ + + + + + + ++ Q++ +
Sbjct: 278 TKTDLVPAFQNL--MKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSD 335
Query: 371 ------EAGASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIG 424
A ASV+ L I L ++ ++P + R ++ L+
Sbjct: 336 ANQHVKSALASVIMGLSPI---LGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNE 392
Query: 425 HVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAK 484
+ +++ + + D +R ++ + LA +L + +
Sbjct: 393 VIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAW-LV 451
Query: 485 DDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYF 544
D IR T + K+ + +I DP R + + +
Sbjct: 452 DHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVC 511
Query: 545 LLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQVSENPSLRESMEA 598
+ +LP + +++ DP +VR + K+++ L+ + ++ +E
Sbjct: 512 GQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEK 565
|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
Score = 83.9 bits (207), Expect = 8e-17
Identities = 56/276 (20%), Positives = 95/276 (34%), Gaps = 15/276 (5%)
Query: 314 FKNDLIDALLFLEEIQMKDKIDKNKFFNGLASAIDKFPKLIS----CHKVLPQLINAFEY 369
+++L+ L D+++ LA + F L+ H +LP L +
Sbjct: 46 TRSELLPFLTDTIY-------DEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATV 98
Query: 370 GEAG--ASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVP 427
E + L I D +A VP V +L G + +R+ V
Sbjct: 99 EETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVS 158
Query: 428 DAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQ 487
A+ ++ Q D P +R + A L +N+ E + F+ L A D+Q
Sbjct: 159 SAVK-AELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNL-ASDEQ 216
Query: 488 GGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLS 547
+R IA L + + +++ +A D R Q+
Sbjct: 217 DSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPE 276
Query: 548 EVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKL 583
++PA L D E VR +A +K F L
Sbjct: 277 ITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENL 312
|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
Score = 60.4 bits (146), Expect = 2e-09
Identities = 34/214 (15%), Positives = 60/214 (28%), Gaps = 30/214 (14%)
Query: 377 LSPLFKIGQMLEHEDYQ-----AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIV 431
L P+ + L +ED Q K + + G TRS LL L
Sbjct: 9 LYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVE--RTRSELLPFLTDT--------- 57
Query: 432 NEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIR 491
+ + + + + L L A ++ +R
Sbjct: 58 ------------IYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESL-ATVEETVVR 104
Query: 492 TNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQ 551
+ I+H P + + R + +R + L + + S V
Sbjct: 105 DKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTS-ACGLFSVCYPRVSSAVKA 163
Query: 552 RILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQ 585
+ L +D VR +A + F LE
Sbjct: 164 ELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLEL 197
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 78.0 bits (191), Expect = 8e-15
Identities = 92/566 (16%), Positives = 169/566 (29%), Gaps = 180/566 (31%)
Query: 2 SRLYRLPKQFT---VN--------KNKVKNIDDDK-------------ALTSEVV-DIRL 36
RLY + F V+ + + + K + +V ++
Sbjct: 117 DRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV 176
Query: 37 SSSPKM-----WAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVT 91
KM W S + V E + SN K+
Sbjct: 177 QC--KMDFKIFWLNLKNCNSPE---TVLEMLQKLLYQIDPN-----WTSRSDHSSNIKLR 226
Query: 92 IFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESP---------SKSLV-------- 134
I + + L + LK+ + + L L +V++ K L+
Sbjct: 227 I------HSIQAELRRL--LKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVT 278
Query: 135 -YL-AVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTS 192
+L A H TL +E K + + + DL +
Sbjct: 279 DFLSAATTTHISLDHHSMTLTP-DEVKSLLLKY----------LDCRPQDLPREVLTTNP 327
Query: 193 IFINSCGE-----------WKLGGLEYMEKISEASCI----PMKRYSRYEDQSTYQ---- 233
++ E WK + + I E S + P + ++ S +
Sbjct: 328 RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIE-SSLNVLEPAEYRKMFDRLSVFPPSAH 386
Query: 234 IPENSLSHVTKCSTDMYGLGILIWE--VFNGPLQSTN---RKSLSNIDNIPENLKRV--- 285
IP LS LIW + + + N + SL E+ +
Sbjct: 387 IPTILLS--------------LIWFDVIKSDVMVVVNKLHKYSLVEKQP-KESTISIPSI 431
Query: 286 YLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKDKIDKNKFFNGLAS 345
YLEL + N+ + P + +DLI +D F++ +
Sbjct: 432 YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLI-----------PPYLD-QYFYSHIGH 479
Query: 346 AIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDY---QAKIVPCVVK 402
H L N E+ E ++ +F L D+ + KI +
Sbjct: 480 -----------H-----LKNI-EHPER-MTLFRMVF-----L---DFRFLEQKI-----R 508
Query: 403 LFGSNDRATRSRL--LLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKS--- 457
+ A+ S L L QL+ + ++ D N+ ++++ LD P I E + S
Sbjct: 509 HDSTAWNASGSILNTLQQLKFYKPYICD---NDPKYERLVNAILDFLPKIEENLICSKYT 565
Query: 458 -IIHLAPKLNYNNLNV--ETLRHFAR 480
++ +A L + + E + R
Sbjct: 566 DLLRIA--LMAEDEAIFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 64.9 bits (157), Expect = 9e-11
Identities = 85/640 (13%), Positives = 168/640 (26%), Gaps = 178/640 (27%)
Query: 99 DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFY--HLDNTLKENN 156
+T E Y L + + D + + + I +D+ + +
Sbjct: 10 ETGEHQYQYKDILSVFE-DAFVDNFDCKDVQ---------DMPKSILSKEEIDHIIMSKD 59
Query: 157 EKKQIYISWGIF--QITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISE 214
+ + + + + LR N+ ++ M I
Sbjct: 60 AVSGTLRLFWTLLSKQEEMVQKFVEEV-LRINY------------KF------LMSPIKT 100
Query: 215 ASCIPMKRYSRYEDQ-----------STYQIP-ENSLSHVTKCSTD-----------MYG 251
P Y +Q + Y + + + + + G
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG 160
Query: 252 LG--ILIWEV---------FNGP---LQSTNRKSLSNIDNIPENLKRVYLEL---ISERP 294
G + +V + L N S + + E L+++ ++ + R
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNS---PETVLEMLQKLLYQIDPNWTSRS 217
Query: 295 NQRPNPADFI--MRNRKPGGYFKNDLIDALLFLEEIQMKDKIDKNKFFNG----L----- 343
+ N I ++ + LL L +Q + FN L
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA---FNLSCKILLTTRF 274
Query: 344 ASAIDKFPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIG-QMLEHEDYQAKIVPCVVK 402
D + H L E S+L Q L E P +
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPDEV-KSLLLKYLDCRPQDLPREV--LTTNPRRLS 331
Query: 403 LFGSNDRATRSRL-------LLQLEHFIGHVPDAIVN-------EQIFQQVALGF-LDTN 447
+ + R + +L I ++ +N ++F ++++ F +
Sbjct: 332 IIAESIRDGLATWDNWKHVNCDKLTTII----ESSLNVLEPAEYRKMFDRLSV-FPPSAH 386
Query: 448 -PT---------IREQTVKSI--------------------IH------LAPKLNYNNLN 471
PT + + V + I N L+
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH 446
Query: 472 VETLRHFARLQAKDDQGGIRTNTTVCVGK-----IAHHLHPQIRQKVLISAFSRAMRD-P 525
+ H+ + D + + + I HHL I ++ F D
Sbjct: 447 RSIVDHY-NIPKTFDSDDL---IPPYLDQYFYSHIGHHLK-NIEHPERMTLFRMVFLDFR 501
Query: 526 FPPA--RNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKL 583
F R+ A+ L ++ + P +C E+ V I FL K+
Sbjct: 502 FLEQKIRHDSTAWNASGSILNTLQQL-KFYKPYICDNDPKYERLVNA-----ILDFLPKI 555
Query: 584 EQVSENPSLRESMEAD-VHTATPSLSNAAATWADWAVTAV 622
E+ +L S D + A L + A V
Sbjct: 556 EE-----NLICSKYTDLLRIA---LMAEDEAIFEEAHKQV 587
|
| >2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Length = 242 | Back alignment and structure |
|---|
Score = 52.3 bits (125), Expect = 1e-07
Identities = 34/203 (16%), Positives = 70/203 (34%), Gaps = 20/203 (9%)
Query: 386 MLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNE--QIFQQVALGF 443
+L+ D +K+ R L LE + P E + +
Sbjct: 6 LLDPVDILSKMPKDFYDKLEEKKWTLRKESLEVLEKLLTDHPKLENGEYGALVSALKKVI 65
Query: 444 L-DTNPTIREQTVKSIIHLAPKLN-----YNNLNVETLRHFARLQAKDDQGGIRTNTTVC 497
D+N + K + LA L Y + V +L + K+ + + T
Sbjct: 66 TKDSNVVLVAMAGKCLALLAKGLAKRFSNYASACVPSLLE----KFKEKKPNVVTALREA 121
Query: 498 VGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVL----ALAATQQYFLLSEVAQRI 553
+ I + + ++ + P ++ L AL TQ L ++ + +
Sbjct: 122 IDAIYASTSLE----AQQESIVESLSNKNPSVKSETALFIARALTRTQPTALNKKLLKLL 177
Query: 554 LPALCQLSTDPEKSVRDSAFKTI 576
+L + +P+ +VRDS+ + +
Sbjct: 178 TTSLVKTLNEPDPTVRDSSAEAL 200
|
| >2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Length = 242 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 2e-04
Identities = 30/242 (12%), Positives = 73/242 (30%), Gaps = 63/242 (26%)
Query: 320 DALLFLEEIQMKDKIDKNKFFNGLAS--------AIDKFPKLISCH---------KVLPQ 362
+ L+ + + K+ K+ F++ L +++ KL++ H ++
Sbjct: 2 SHMDLLDPVDILSKMPKD-FYDKLEEKKWTLRKESLEVLEKLLTDHPKLENGEYGALVSA 60
Query: 363 LINAFEYGEAGASVLSPLFKIGQMLEH-----EDYQAKIVPCVVKLFGSNDRATRSRLLL 417
L V + + + +Y + VP +++ F + L
Sbjct: 61 LKKVITKDSNVVLVAMAGKCLALLAKGLAKRFSNYASACVPSLLEKFKEKKPNVVTALRE 120
Query: 418 QLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRH 477
++ E + + + NP+++ +T I + LN + L
Sbjct: 121 AIDAIYASTS----LEAQQESIVESLSNKNPSVKSETALFIARALTRTQPTALNKKLL-- 174
Query: 478 FARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLAL 537
K+L ++ + + +P P R++ AL
Sbjct: 175 ----------------------------------KLLTTSLVKTLNEPDPTVRDSSAEAL 200
Query: 538 AA 539
Sbjct: 201 GT 202
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 6e-07
Identities = 50/268 (18%), Positives = 90/268 (33%), Gaps = 54/268 (20%)
Query: 82 KKKGSNEKV---TIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDS----------VES 128
K K + I L + E + VK L L HP I+ + ++ S
Sbjct: 25 KNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84
Query: 129 PSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQI--YISWGIF-QITRALSFLINDADLRH 185
K +Y+ ++ +L + + ++ + IF QI A+ FL H
Sbjct: 85 SPKVYLYIQMQLCRKE--NLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFL-------H 135
Query: 186 -NHVNH----TS-IFINSCGEWKLG--GL-EYMEKISEASCIPMKRYSRYEDQST----- 231
+ H S IF K+G GL M++ E + +
Sbjct: 136 SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKL 195
Query: 232 YQIPE--NSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI----------DNIP 279
Y PE + S+ K D++ LG++++E+ R
Sbjct: 196 YMSPEQIHGNSYSHKV--DIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKY 253
Query: 280 ENLKRVYLELISERPNQRPNPADFIMRN 307
+ +++S P +RP + I+ N
Sbjct: 254 PCEYVMVQDMLSPSPMERPEAIN-IIEN 280
|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 | Back alignment and structure |
|---|
Score = 50.9 bits (120), Expect = 2e-06
Identities = 30/248 (12%), Positives = 78/248 (31%), Gaps = 21/248 (8%)
Query: 355 SCHKVLPQLINA-----FEYGEAGASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDR 409
S KV+ ++ E L PL + E IV + S+
Sbjct: 45 SERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVK----EYQVETIVDTLCTNMLSDKE 100
Query: 410 ATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFL---------DTNPTIREQTVKSIIH 460
R + L+ IG +P A + V + +++ + + +
Sbjct: 101 QLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMAD 160
Query: 461 LAPKL-NYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFS 519
+ + ++ Q + +R T + +G + + ++ S
Sbjct: 161 MLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHLLS 220
Query: 520 RAMRDPFPPARNAGVLALAATQQYF--LLSEVAQRILPALCQLSTDPEKSVRDSAFKTIK 577
++ + +AA + + E ++I+P + + + +R+ + +
Sbjct: 221 ELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFE 280
Query: 578 GFLGKLEQ 585
F+ + +
Sbjct: 281 SFVRRCPK 288
|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 | Back alignment and structure |
|---|
Score = 42.8 bits (99), Expect = 5e-04
Identities = 54/383 (14%), Positives = 106/383 (27%), Gaps = 59/383 (15%)
Query: 356 CHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEH-----EDYQAKIVPCVVKLFGSNDRA 410
C K+ +L +A E + L L + ML ++ I+ C++ S A
Sbjct: 131 CKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLA 190
Query: 411 TRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIRE---QTVKSIIHLAPKLNY 467
R R ++ L H + + + + I ++ + + + Q + +I A
Sbjct: 191 VRKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIG 250
Query: 468 NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV-------------- 513
L E + D +R ++ V
Sbjct: 251 EYL--EKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYD 308
Query: 514 -------------------------LISAFSRAMRDPFPPARNAGVLALAA--TQQYFLL 546
D R A L A + ++ +L
Sbjct: 309 PNYNYDDEDEDENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEML 368
Query: 547 SEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQVSENPSLRESME------ADV 600
E + + PAL + E++V+ F L + V ++ME +
Sbjct: 369 PEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTML 428
Query: 601 HTATPSLSNAAATWADWAVTAVTSKFYRSQSETLKTSRGPTRPSGRFLSKP--ASLEASS 658
+ P++ A + +E + G L SL S
Sbjct: 429 QSQVPNIVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKS 488
Query: 659 ASSMSTTTTASSVASLASSLEHE 681
+SS S + + + +
Sbjct: 489 SSSNLKIDALSCLYVILCNHSPQ 511
|
| >2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 | Back alignment and structure |
|---|
Score = 48.9 bits (116), Expect = 3e-06
Identities = 28/222 (12%), Positives = 74/222 (33%), Gaps = 14/222 (6%)
Query: 377 LSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIF 436
L+ + ++L Y ++ +++L + + + D +
Sbjct: 14 LANGEHLEKILIMAKYDESVLKKLIELLDDDLWTVVKNAISIIMVIAKTREDLYEPM-LK 72
Query: 437 QQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTV 496
+ +L + ++ K+ +A + V+++ + + N +
Sbjct: 73 KLFSLLKKSEAIPLTQEIAKAFGQMAKE---KPELVKSMIPVLFANYRIGDEKTKINVSY 129
Query: 497 CVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPA 556
+ +IA +P + + + F + + + + A + + LP
Sbjct: 130 ALEEIAKA-NPMLMASI-VRDFMSMLSSKNREDKLTALNFIEAMGENS--FKYVNPFLPR 185
Query: 557 LCQLSTDPEKSVRDSAFKTIKGFLGKLEQVSENPSLRESMEA 598
+ L D ++ VR SA + L L + N LR+ +
Sbjct: 186 IINLLHDGDEIVRASAVEA----LVHL--ATLNDKLRKVVIK 221
|
| >2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans} Length = 266 | Back alignment and structure |
|---|
Score = 49.0 bits (116), Expect = 3e-06
Identities = 22/196 (11%), Positives = 61/196 (31%), Gaps = 12/196 (6%)
Query: 389 HEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVN--EQIFQQVALGFLDT 446
+ ++ D L L P ++++ + + + L F +T
Sbjct: 40 QTLLGNQAKVSLMSQLFHKDFKQHLAALDSLVRLADTSPRSLLSNSDLLLKWCTLRFFET 99
Query: 447 NPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGG-----IRTNTTVCVGKI 501
NP + ++ + + + A + + G +RT+ V +
Sbjct: 100 NPAALIKVLELCKVIVELIRDTETPMSQEEVSAFVPYLLLKTGEAKDNMRTSVRDIVNVL 159
Query: 502 AHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAAT-QQYFLLSEVAQRILPALCQL 560
+ + P + A++ R+ +L + + + + +
Sbjct: 160 SDVVGPLK----MTPMLLDALKSKNARQRSECLLVIEYYITNAGISPLKSLSVEKTVAPF 215
Query: 561 STDPEKSVRDSAFKTI 576
D + +VR++A +
Sbjct: 216 VGDKDVNVRNAAINVL 231
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 46/251 (18%), Positives = 99/251 (39%), Gaps = 57/251 (22%)
Query: 97 SADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENN 156
+ + +S V L+ L+HP+I+ + D + + + +Y+ +EY E L + + +
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE--GGDLASVITKGT 102
Query: 157 EKKQIYIS----WGIF-QITRALSFLINDADLRHNHVNH-----TSIFINSCGEWKLG-- 204
+++Q Y+ + Q+T AL + + V H ++F++ KLG
Sbjct: 103 KERQ-YLDEEFVLRVMTQLTLALKEC-HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160
Query: 205 GLEYMEKISEASCIPMKRYSRYEDQST-------YQIPE--NSLSHVTKCSTDMYGLGIL 255
G ++ + + + Y PE N +S+ K D++ LG L
Sbjct: 161 G------LA-------RILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKS--DIWSLGCL 205
Query: 256 IWEVFNG--PLQSTNRKSL------SNIDNIPEN----LKRVYLELISERPNQRPNPAD- 302
++E+ P + ++K L IP L + +++ + RP+ +
Sbjct: 206 LYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
Query: 303 ----FIMRNRK 309
I+ +
Sbjct: 266 LENPLILEHHH 276
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 1e-05
Identities = 47/283 (16%), Positives = 97/283 (34%), Gaps = 47/283 (16%)
Query: 63 VSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTF 122
V + + + + ++ T + S + ++++ + +
Sbjct: 67 VRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQ 126
Query: 123 LDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQ--IYISWGIF-QITRALSFLIN 179
L S K +Y+ ++ +L + + + + IF QI A+ FL
Sbjct: 127 LQP--SSPKVYLYIQMQLCRK--ENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFL-- 180
Query: 180 DADLRHNH-VNH----TS-IFINSCGEWKLG--GLEYMEKISEASCIPMKRYSRYEDQST 231
H+ + H S IF K+G GL E + Y +
Sbjct: 181 -----HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTG 235
Query: 232 ------YQIPE--NSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-LSNIDN--IPE 280
Y PE + ++ K D++ LG++++E+ R ++++ N P
Sbjct: 236 QVGTKLYMSPEQIHGNNYSHKV--DIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPL 293
Query: 281 NLKRVYLE-------LISERPNQRPNPADFIMRNRKPGGYFKN 316
+ Y + ++S P +RP D I+ N F+N
Sbjct: 294 LFTQKYPQEHMMVQDMLSPSPTERPEATD-IIEN----AIFEN 331
|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 | Back alignment and structure |
|---|
Score = 46.3 bits (109), Expect = 4e-05
Identities = 39/209 (18%), Positives = 72/209 (34%), Gaps = 21/209 (10%)
Query: 385 QMLEHEDYQAKIVPCVVKLF---GSNDRATRSRLLLQLEHFIGHVPDAI---VNEQIFQQ 438
Q LE + ++ + S D TRS L L++ + V + I +
Sbjct: 35 QKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSE 94
Query: 439 VALGFLDTNPTIRE---QTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDD---QGGIRT 492
D++P IR + +I N+ +L + L + L ++D +G
Sbjct: 95 CLNNIGDSSPLIRATVGILITTIASKGELQNWPDL-LPKL--CSLLDSEDYNTCEGAFGA 151
Query: 493 NTTVCVGKIAHHLHPQIRQKVL---ISAFSRAMRDPFPPARNAGVLALAA--TQQYFLLS 547
+C A L + + L I F + + P R+ V + + L
Sbjct: 152 LQKIC-EDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALM 210
Query: 548 EVAQRILPALCQLSTDPEKSVRDSAFKTI 576
+ L L+ D E VR + + +
Sbjct: 211 LHIDSFIENLFALAGDEEPEVRKNVCRAL 239
|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 8e-04
Identities = 30/252 (11%), Positives = 76/252 (30%), Gaps = 34/252 (13%)
Query: 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVN--EQIFQQVALGFLDTNPTIREQ 453
+ + L G + R + L + D ++ I + + D + + +
Sbjct: 216 FIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALE 275
Query: 454 TVKSIIHLAPKLNYNNLNVETLRHFARLQAK-------------------------DDQG 488
+ + LA + ++ V L +
Sbjct: 276 ACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEGGSGGDDTISDW 335
Query: 489 GIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQY---FL 545
+R + + +A+ ++ ++ + + +G+L L A + +
Sbjct: 336 NLRKCSAAALDVLANVYRDELLP-HILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGM 394
Query: 546 LSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQVSENPSLRESMEADVHTATP 605
+ + + ++P L Q +D + VR T+ + + + L+ M +
Sbjct: 395 IPYLPE-LIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILD 453
Query: 606 SLSN--AAATWA 615
S AA A
Sbjct: 454 SNKRVQEAACSA 465
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 9e-05
Identities = 32/163 (19%), Positives = 57/163 (34%), Gaps = 39/163 (23%)
Query: 81 GKKKGSNEKVTI--FLNDSADTYEP--ALSYVKKLKTLRHPSILTFLDSVESPSKSLVYL 136
+ + + + V I FL D AL ++ LK L+HP+++ L+ + ++L
Sbjct: 22 CRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRR--LHL 79
Query: 137 AVEYVEPIFYHLDNTLKENNEKKQIYISWG-----IFQITRALSFLINDADLRHNH-VNH 190
EY D+T+ ++ Q + +Q +A++F H H H
Sbjct: 80 VFEY-------CDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFC-------HKHNCIH 125
Query: 191 -----TSIFINSCGEWKLG--GLEYMEKISEASCIPMKRYSRY 226
+I I KL G + P Y
Sbjct: 126 RDVKPENILITKHSVIKLCDFGF------ARLLTGPSDYYDDE 162
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 1e-04
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 47/206 (22%)
Query: 81 GKKKGSNEKVTI--FLNDSADTYEP--ALSYVKKLKTLRHPSILTFLDSVESPSKSLVYL 136
+ K + V I FL D A+ +K LK LRH +++ L+ K YL
Sbjct: 44 CRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVC--KKKKRWYL 101
Query: 137 AVEYVEPIFYHLDNTLKENNEKKQIYISWG-----IFQITRALSFLINDADLRHNH-VNH 190
E+ +D+T+ ++ E + + +FQI + F H+H + H
Sbjct: 102 VFEF-------VDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFC-------HSHNIIH 147
Query: 191 -----TSIFINSCGEWKLG--GLEYMEKISEASCIPMKRYSRYEDQST--YQIPENSLSH 241
+I ++ G KL G + P + Y +T Y+ PE L
Sbjct: 148 RDIKPENILVSQSGVVKLCDFGF------ARTLAAPGEVYDDE--VATRWYRAPE-LLVG 198
Query: 242 VTKCST--DMYGLGILIWEVFNG-PL 264
K D++ +G L+ E+F G PL
Sbjct: 199 DVKYGKAVDVWAIGCLVTEMFMGEPL 224
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 47/263 (17%), Positives = 96/263 (36%), Gaps = 53/263 (20%)
Query: 92 IFLNDSADTYEPALSYVKKLKTLRHPSILTFLDS--VESPSKSLVYLAVEYVE--PIFYH 147
I ++ D E A + HP+IL + E +K +L + + + ++
Sbjct: 62 ILCHEQQDR-EEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNE 120
Query: 148 LDNTLKENNEK---KQIYISWGIF-QITRALSFLINDADLRH-NHVNH-----TSIFINS 197
+ LK+ QI + I R L + H H T+I +
Sbjct: 121 I-ERLKDKGNFLTEDQI---LWLLLGICRGLEAI-------HAKGYAHRDLKPTNILLGD 169
Query: 198 CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQST-----YQIPE--NSLSHVTK-CSTDM 249
G+ L L M + + + + + Y+ PE + SH TD+
Sbjct: 170 EGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDV 229
Query: 250 YGLGILIWEV------FNGPLQSTNRKSL--SNIDNIPEN------LKRVYLELISERPN 295
+ LG +++ + ++ Q + +L N +IP++ L ++ +++ P+
Sbjct: 230 WSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPH 289
Query: 296 QRPNPAD-----FIMRNRKPGGY 313
QRP+ ++ PG +
Sbjct: 290 QRPHIPLLLSQLEALQPPAPGQH 312
|
| >3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510 | Back alignment and structure |
|---|
Score = 43.9 bits (103), Expect = 2e-04
Identities = 39/262 (14%), Positives = 79/262 (30%), Gaps = 18/262 (6%)
Query: 351 PKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDRA 410
L++ V A Y LS L + D +I+P +V+L ND
Sbjct: 188 DPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPE 247
Query: 411 TRSRLLLQLEHFIGHVPD---AIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLA---PK 464
+ + + + +V + + Q+ T I +++I ++ +
Sbjct: 248 VLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDE 307
Query: 465 LNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ---IRQKVLISAFSRA 521
++ L F L + + I+ T + I Q + L+
Sbjct: 308 QTQKVIDAGALAVFPSL-LTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGV 366
Query: 522 MRDPFPPARNAGVLALAA------TQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKT 575
+ + A+ +Q L V I+ L L + + +
Sbjct: 367 LSKADFKTQKEAAWAITNYTSGGTVEQIVYL--VHCGIIEPLMNLLSAKDTKIIQVILDA 424
Query: 576 IKGFLGKLEQVSENPSLRESME 597
I E++ E L +E
Sbjct: 425 ISNIFQAAEKLGETEKLSIMIE 446
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 52/294 (17%), Positives = 99/294 (33%), Gaps = 69/294 (23%)
Query: 81 GKKKGSNEKVTI-FLNDSADTYEPALSYVKKLKTLRHPSILTFLDS-----------VES 128
+ + I + + + LS V L +L H ++ + +
Sbjct: 25 ARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84
Query: 129 PSKSLVYLAVEYV---EPIFYHLDNTLKENNEKKQIYISWGIF-QITRALSFLINDADLR 184
KS +++ +EY L + + N +Q W +F QI ALS++
Sbjct: 85 KKKSTLFIQMEYCENGT-----LYDLIHSENLNQQRDEYWRLFRQILEALSYI------- 132
Query: 185 HNH---------VNHTSIFINSCGEWKLG--GL--EYMEKISEASCIPMKRYSRYEDQST 231
H+ +N IFI+ K+G GL + ++ ++
Sbjct: 133 HSQGIIHRDLKPMN---IFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 232 ------YQIPE---NSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI------- 275
Y E + + K DMY LGI+ +E+ R ++
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKI--DMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIE 247
Query: 276 ------DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALL 323
DN + K++ LI PN+RP ++ + ++++I L
Sbjct: 248 FPPDFDDNKMKVEKKIIRLLIDHDPNKRPGART-LLNSGWLPVKHQDEVIKEAL 300
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 48/273 (17%), Positives = 95/273 (34%), Gaps = 74/273 (27%)
Query: 81 GKKKGSNEKVTI----FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYL 136
K + I S+ E + V L ++HP+I+ + +S E +Y+
Sbjct: 43 VKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFE--ENGSLYI 100
Query: 137 AVEYVEPIFYHLDNTLKEN-NEKKQIYIS----WGIF-QITRALSFLINDADLRH-NHVN 189
++Y E L + N +K + F QI AL + H +
Sbjct: 101 VMDYCE------GGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV-------HDRKIL 147
Query: 190 H-----TSIFINSCGEWKLG--GLEYMEKISEASCIPMKRYSRYEDQST-------YQIP 235
H +IF+ G +LG G I+ + + + + Y P
Sbjct: 148 HRDIKSQNIFLTKDGTVQLGDFG------IA-------RVLNSTVELARACIGTPYYLSP 194
Query: 236 E--NSLSHVTKCSTDMYGLGILIWEVFNG--PLQSTNRKSL------SNIDNIPEN---- 281
E + + K D++ LG +++E+ ++ + K+L + + +
Sbjct: 195 EICENKPYNNKS--DIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYD 252
Query: 282 LKRVYLELISERPNQRPNPAD-----FIMRNRK 309
L+ + +L P RP+ FI + +
Sbjct: 253 LRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIE 285
|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 4e-04
Identities = 40/283 (14%), Positives = 78/283 (27%), Gaps = 60/283 (21%)
Query: 368 EYGEAGASVLSPLFKIGQMLEHEDYQ--------------AKIVPCVVKLFGSNDRATRS 413
Y + LF ++L+ + V ++ + R
Sbjct: 16 LYNQCKKLNDDELF---RLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRD 72
Query: 414 ---RLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNL 470
+L Q++ + I +AL D + +R ++S K N +
Sbjct: 73 IGAFILGQIKICKKCEDNVFN---ILNNMALN--DKSACVRATAIESTAQRCKK---NPI 124
Query: 471 NVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPAR 530
+ +++ A D +R T + I K I ++DP R
Sbjct: 125 YSPKIVEQSQITAFDKSTNVRRATAFAISVIND--------KATIPLLINLLKDPNGDVR 176
Query: 531 NAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQVSENP 590
N A+ + I ++ D + VR A L +
Sbjct: 177 NWAAFAIN------INKYDNSDIRDCFVEMLQDKNEEVRIEAIIG----LSYRKDKRVLS 226
Query: 591 SLRESME-ADVH-------------TATPSLSNAAATWADWAV 619
L + ++ V+ T P L + D +
Sbjct: 227 VLCDELKKNTVYDDIIEAAGELGDKTLLPVLDTMLYKFDDNEI 269
|
| >1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A Length = 876 | Back alignment and structure |
|---|
Score = 42.2 bits (98), Expect = 7e-04
Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Query: 485 DDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAA---TQ 541
DD VC+ +A I ++ +++P R+A V+A
Sbjct: 339 DDDWNPCKAAGVCLMLLATCCEDDIVP-HVLPFIKEHIKNPDWRYRDAAVMAFGCILEGP 397
Query: 542 QYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQVSENP 590
+ L + + +P L +L DP VRD+A T+ L + + N
Sbjct: 398 EPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAIND 446
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 8e-04
Identities = 37/245 (15%), Positives = 89/245 (36%), Gaps = 66/245 (26%)
Query: 108 VKKLKTLRHPSILTFLDSVE--------------SPSKSLVYLAVEYVE--PIFYHLDNT 151
VK L L H +I+ + + +++ +E+ + + ++
Sbjct: 55 VKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 114
Query: 152 LKENNEKKQIYISWGIF-QITRALSFLINDADLRH-NHVNH----TS-IFINSCGEWKLG 204
E +K +F QIT+ + ++ H + + S IF+ + K+G
Sbjct: 115 RGEKLDKVLA---LELFEQITKGVDYI-------HSKKLINRDLKPSNIFLVDTKQVKIG 164
Query: 205 --GL-EYMEKISEASCI---PMKRYSRYEDQSTYQIPE--NSLSHVTKCSTDMYGLGILI 256
GL ++ + + Y PE +S + + D+Y LG+++
Sbjct: 165 DFGLVTSLKNDGKRTRSKGTLR-----------YMSPEQISSQDYGKEV--DLYALGLIL 211
Query: 257 WEVFNGPLQSTNRKSL-SNIDNIP------ENLKRVYLELISERPNQRPNPAD-----FI 304
E+ + + +++ + + K + +L+S++P RPN ++ +
Sbjct: 212 AELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTV 271
Query: 305 MRNRK 309
+
Sbjct: 272 WKKSP 276
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 40.5 bits (94), Expect = 8e-04
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 808 TEPSIKMEES---RKRREEKKMARQKELEAKRAAKQSGGPLKLGAKK 851
+ +E RK REE++ R +EL+A + + AKK
Sbjct: 75 AQADRLTQEPESIRKWREEQR-KRLQELDAASKVMEQE--WREKAKK 118
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 852 | |||
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.98 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.98 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.97 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.97 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.92 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.81 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.74 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.65 | |
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 99.51 | |
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 99.46 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.4 | |
| 2qk2_A | 242 | LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 | 98.94 | |
| 1ibr_B | 462 | P95, importin beta-1 subunit, nuclear factor; smal | 98.92 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.92 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.76 | |
| 4fdd_A | 852 | Transportin-1; heat repeats, karyopherin, nuclear | 98.7 | |
| 1u6g_C | 1230 | TIP120 protein, CAND1; cullin repeat, heat repeat, | 98.68 | |
| 2qk2_A | 242 | LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 | 98.62 | |
| 3ltm_A | 211 | Alpha-REP4; protein engineering, heat-like repeat, | 98.62 | |
| 4fdd_A | 852 | Transportin-1; heat repeats, karyopherin, nuclear | 98.62 | |
| 2bpt_A | 861 | Importin beta-1 subunit; nuclear transport, nucleo | 98.58 | |
| 3ltm_A | 211 | Alpha-REP4; protein engineering, heat-like repeat, | 98.56 | |
| 2jdq_A | 450 | Importin alpha-1 subunit; transport, PB2 subunit, | 98.56 | |
| 1qgr_A | 876 | Protein (importin beta subunit); transport recepto | 98.55 | |
| 2bpt_A | 861 | Importin beta-1 subunit; nuclear transport, nucleo | 98.54 | |
| 3ltj_A | 201 | Alpharep-4; protein engineering, heat-like repeat, | 98.53 | |
| 1ibr_B | 462 | P95, importin beta-1 subunit, nuclear factor; smal | 98.52 | |
| 1u6g_C | 1230 | TIP120 protein, CAND1; cullin repeat, heat repeat, | 98.5 | |
| 4hxt_A | 252 | De novo protein OR329; structural genomics, PSI-bi | 98.49 | |
| 3ltj_A | 201 | Alpharep-4; protein engineering, heat-like repeat, | 98.49 | |
| 1qgr_A | 876 | Protein (importin beta subunit); transport recepto | 98.47 | |
| 2jdq_A | 450 | Importin alpha-1 subunit; transport, PB2 subunit, | 98.45 | |
| 4db6_A | 210 | Armadillo repeat protein; solenoid repeat, armadil | 98.44 | |
| 1wa5_B | 530 | Importin alpha subunit; nuclear transport/complex, | 98.43 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.43 | |
| 2qk1_A | 249 | Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h | 98.37 | |
| 1oyz_A | 280 | Hypothetical protein YIBA; structural genomics, PS | 98.33 | |
| 1wa5_B | 530 | Importin alpha subunit; nuclear transport/complex, | 98.31 | |
| 4hxt_A | 252 | De novo protein OR329; structural genomics, PSI-bi | 98.25 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.24 | |
| 4db8_A | 252 | Armadillo-repeat protein; solenoid repeat, de novo | 98.23 | |
| 4b8j_A | 528 | Importin subunit alpha-1A; transport protein, nucl | 98.22 | |
| 4b8j_A | 528 | Importin subunit alpha-1A; transport protein, nucl | 98.19 | |
| 1oyz_A | 280 | Hypothetical protein YIBA; structural genomics, PS | 98.12 | |
| 4db8_A | 252 | Armadillo-repeat protein; solenoid repeat, de novo | 98.12 | |
| 2vgl_B | 591 | AP-2 complex subunit beta-1; cytoplasmic vesicle, | 98.03 | |
| 3tpo_A | 529 | Importin subunit alpha-2; nuclear import, protein | 98.01 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 97.98 | |
| 2qk1_A | 249 | Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h | 97.94 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 97.91 | |
| 2vgl_B | 591 | AP-2 complex subunit beta-1; cytoplasmic vesicle, | 97.84 | |
| 3ul1_B | 510 | Importin subunit alpha-2; arm repeat, armadillo re | 97.83 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 97.79 | |
| 3l9t_A | 240 | Putative uncharacterized protein SMU.31; hypotheti | 97.73 | |
| 1xqr_A | 296 | HSPBP1 protein; armadillo repeat, superhelical twi | 97.68 | |
| 4ffb_C | 278 | Protein STU2; tubulin fold, heat repeats, cytoskel | 97.67 | |
| 2of3_A | 266 | ZYG-9; multifunctional macromolecule, kinetochore, | 97.66 | |
| 4db6_A | 210 | Armadillo repeat protein; solenoid repeat, armadil | 97.65 | |
| 3tpo_A | 529 | Importin subunit alpha-2; nuclear import, protein | 97.52 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.49 | |
| 1te4_A | 131 | Conserved protein MTH187; methanobacterium thermoa | 97.47 | |
| 3tjz_B | 355 | Coatomer subunit gamma; protein trafficking, golgi | 97.43 | |
| 2z6h_A | 644 | Catenin beta-1, beta-catenin; C-terminal domain, a | 97.38 | |
| 1w63_A | 618 | Adapter-related protein complex 1 gamma 1 subunit; | 97.33 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 97.3 | |
| 3ul1_B | 510 | Importin subunit alpha-2; arm repeat, armadillo re | 97.27 | |
| 1jdh_A | 529 | Beta-catenin; beta-catenin, protein-protein comple | 97.26 | |
| 1jdh_A | 529 | Beta-catenin; beta-catenin, protein-protein comple | 97.22 | |
| 2z6g_A | 780 | B-catenin; FULL-length, beta-catenin, cell adhesio | 97.18 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.17 | |
| 1xqr_A | 296 | HSPBP1 protein; armadillo repeat, superhelical twi | 97.14 | |
| 2z6g_A | 780 | B-catenin; FULL-length, beta-catenin, cell adhesio | 97.13 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.09 | |
| 2z6h_A | 644 | Catenin beta-1, beta-catenin; C-terminal domain, a | 96.98 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 96.95 | |
| 3nmw_A | 354 | APC variant protein; ARMADIILO repeats domain, cel | 96.94 | |
| 1te4_A | 131 | Conserved protein MTH187; methanobacterium thermoa | 96.94 | |
| 3nmz_A | 458 | APC variant protein; protein-protein complex, arma | 96.9 | |
| 3now_A | 810 | UNC-45 protein, SD10334P; armadillo repeat, HSP90, | 96.9 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 96.88 | |
| 2iw3_A | 986 | Elongation factor 3A; acetylation, ATP-binding, pr | 96.79 | |
| 1w63_A | 618 | Adapter-related protein complex 1 gamma 1 subunit; | 96.72 | |
| 2vgl_A | 621 | Adaptor protein complex AP-2, alpha 2 subunit; cyt | 96.71 | |
| 1wa5_C | 960 | Importin alpha RE-exporter; nuclear transport/comp | 96.66 | |
| 4ffb_C | 278 | Protein STU2; tubulin fold, heat repeats, cytoskel | 96.56 | |
| 3now_A | 810 | UNC-45 protein, SD10334P; armadillo repeat, HSP90, | 96.5 | |
| 2iw3_A | 986 | Elongation factor 3A; acetylation, ATP-binding, pr | 96.34 | |
| 1xm9_A | 457 | Plakophilin 1; armadillo repeat, cell adhesion; 2. | 96.08 | |
| 2of3_A | 266 | ZYG-9; multifunctional macromolecule, kinetochore, | 95.94 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 95.86 | |
| 1wa5_C | 960 | Importin alpha RE-exporter; nuclear transport/comp | 95.8 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 95.74 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 95.73 | |
| 2vgl_A | 621 | Adaptor protein complex AP-2, alpha 2 subunit; cyt | 95.62 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 95.58 | |
| 1lrv_A | 244 | LRV, leucine-rich repeat variant; leucine-rich rep | 95.55 | |
| 1lrv_A | 244 | LRV, leucine-rich repeat variant; leucine-rich rep | 95.34 | |
| 3b2a_A | 265 | TON_1937, putative uncharacterized protein; heat-r | 95.08 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 95.03 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 94.57 | |
| 3tjz_B | 355 | Coatomer subunit gamma; protein trafficking, golgi | 94.41 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 94.32 | |
| 3m1i_C | 1049 | Exportin-1; heat repeat, GTP-binding, nucleotide-b | 94.25 | |
| 3nmw_A | 354 | APC variant protein; ARMADIILO repeats domain, cel | 94.24 | |
| 3nmz_A | 458 | APC variant protein; protein-protein complex, arma | 93.93 | |
| 2x1g_F | 971 | Cadmus; transport protein, developmental protein, | 93.89 | |
| 1xm9_A | 457 | Plakophilin 1; armadillo repeat, cell adhesion; 2. | 93.85 | |
| 2x19_B | 963 | Importin-13; nuclear transport, protein transport; | 93.75 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 93.74 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 93.73 | |
| 4hat_C | 1023 | Exportin-1; heat repeat, nuclear export, RAN-ranbp | 93.71 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 93.69 | |
| 3opb_A | 778 | SWI5-dependent HO expression protein 4; heat and a | 92.37 | |
| 3opb_A | 778 | SWI5-dependent HO expression protein 4; heat and a | 92.31 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 91.94 | |
| 3l6x_A | 584 | Catenin delta-1; catenin, armadillo, ARM, JMD, CE | 91.32 | |
| 2x19_B | 963 | Importin-13; nuclear transport, protein transport; | 91.13 | |
| 3l6x_A | 584 | Catenin delta-1; catenin, armadillo, ARM, JMD, CE | 90.87 | |
| 3tt9_A | 233 | Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} | 90.6 | |
| 3b2a_A | 265 | TON_1937, putative uncharacterized protein; heat-r | 89.38 | |
| 3m1i_C | 1049 | Exportin-1; heat repeat, GTP-binding, nucleotide-b | 88.93 | |
| 4ady_A | 963 | RPN2, 26S proteasome regulatory subunit RPN2; prot | 88.87 | |
| 3ibv_A | 980 | Exportin-T; karyopherin, heat repeat, cytoplasm, n | 87.46 | |
| 3oc3_A | 800 | Helicase MOT1, MOT1; regulation of transcription, | 87.31 | |
| 3l9t_A | 240 | Putative uncharacterized protein SMU.31; hypotheti | 87.21 | |
| 2x1g_F | 971 | Cadmus; transport protein, developmental protein, | 86.67 | |
| 4ady_A | 963 | RPN2, 26S proteasome regulatory subunit RPN2; prot | 85.11 | |
| 3u0r_A | 507 | Apoptosis inhibitor 5; heat repeat, armadillo repe | 84.55 | |
| 1vsy_5 | 997 | Proteasome activator BLM10; 20S proteasome BLM10, | 84.52 | |
| 3gs3_A | 257 | Symplekin, LD45768P; helix-turn-helix heat repeat | 83.55 | |
| 4gmo_A | 684 | Putative uncharacterized protein; ARM, heat, solen | 83.41 | |
| 2db0_A | 253 | 253AA long hypothetical protein; heat repeats, hel | 82.59 | |
| 4gmo_A | 684 | Putative uncharacterized protein; ARM, heat, solen | 81.46 | |
| 3ibv_A | 980 | Exportin-T; karyopherin, heat repeat, cytoplasm, n | 80.35 |
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-47 Score=418.16 Aligned_cols=237 Identities=17% Similarity=0.230 Sum_probs=212.2
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
.|++.++|| .|+||+||+|+++.+|+.||||+++. ....+.+.+|+++|+.|+||||++++++++++ +
T Consensus 75 ~y~~~~~iG--------~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~--~ 144 (346)
T 4fih_A 75 YLDNFIKIG--------EGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG--D 144 (346)
T ss_dssp TEEEEEEEE--------ECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEET--T
T ss_pred hcEEeEEee--------cCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--C
Confidence 499999999 99999999999999999999999987 44556789999999999999999999999998 9
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
.+|||||||. +|.+++.+ +.+++..++.++.||+.||.||| +.|||||||||+|||++.+|.+||+|||+++
T Consensus 145 ~~~ivmEy~~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH-~~~IiHRDlKp~NILl~~~g~vKl~DFGla~ 218 (346)
T 4fih_A 145 ELWVVMEFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLH-AQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 218 (346)
T ss_dssp EEEEEECCCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH-HCCcccccCCHHHEEECCCCCEEEecCcCce
Confidence 9999999998 79998843 57999999999999999999999 8999999999999999999999999999998
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------ccCcC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------LSNID 276 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------l~~~~ 276 (852)
.+... .......+||+.|+|||++.+..|+.++|||||||++|||++|.+||.+... +....
T Consensus 219 ~~~~~----~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~ 294 (346)
T 4fih_A 219 QVSKE----VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH 294 (346)
T ss_dssp ECCSS----SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGG
T ss_pred ecCCC----CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccc
Confidence 55332 2223457899999999999888899999999999999999999999976432 22345
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.+++++.++|.+||..||++|||+.++++| +||.+
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~H-----p~~~~ 329 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRATAAELLKH-----PFLAK 329 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTTC-----GGGGG
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhcC-----HhhcC
Confidence 789999999999999999999999999998 89865
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-47 Score=413.07 Aligned_cols=245 Identities=13% Similarity=0.195 Sum_probs=213.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
+|++++.|| .|+||+||+|+++.+|+.||||++++ ....+.+.+|+++|++|+||||++++++++++
T Consensus 33 dy~i~~~lG--------~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 104 (311)
T 4aw0_A 33 DFKFGKILG--------EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD 104 (311)
T ss_dssp GEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred ccEEEEEEe--------cccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC
Confidence 499999999 99999999999999999999999986 45677899999999999999999999999988
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+++|||||||. +|.++|.+ .+.+++..++.++.||+.||.||| +.+|+||||||+|||++.+|.+||+|||
T Consensus 105 --~~~yivmEy~~gG~L~~~i~~----~~~l~e~~~~~~~~qi~~al~ylH-~~~IiHRDlKPeNILl~~~g~vKl~DFG 177 (311)
T 4aw0_A 105 --EKLYFGLSYAKNGELLKYIRK----IGSFDETCTRFYTAEIVSALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFG 177 (311)
T ss_dssp --SEEEEEECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred --CEEEEEEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCCccCCCCHHHeEEcCCCCEEEEEcC
Confidence 99999999998 79999953 267999999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcC
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNID 276 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~ 276 (852)
+++.+.... ........+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.+. ...+.
T Consensus 178 la~~~~~~~--~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~ 255 (311)
T 4aw0_A 178 TAKVLSPES--KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE 255 (311)
T ss_dssp TCEECCTTT--TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT
T ss_pred CceecCCCC--CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc
Confidence 998653221 12233467899999999999888899999999999999999999999975432 23456
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhhc-CCCCCCcc
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRNR-KPGGYFKN 316 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~-~~~~fF~n 316 (852)
.++++++++|++||..||++|||+.+++.+-. ..++||++
T Consensus 256 ~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~ 296 (311)
T 4aw0_A 256 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 296 (311)
T ss_dssp TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTT
T ss_pred ccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCC
Confidence 88999999999999999999999988533210 11377765
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=404.14 Aligned_cols=239 Identities=14% Similarity=0.223 Sum_probs=198.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.+|++++.|| +|+||+||+|+++.+|+.||||++++ ......+.+|+++|++|+||||+++++++++
T Consensus 13 g~Y~i~~~lG--------~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~ 84 (275)
T 3hyh_A 13 GNYQIVKTLG--------EGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS 84 (275)
T ss_dssp -CCEEEEEEE--------C---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred eCeEEEEEEe--------cCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE
Confidence 3699999999 99999999999999999999999986 3345678999999999999999999999998
Q ss_pred CCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 129 PSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 129 ~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+ +.+||||||+. +|.++|.+ .+.+++..++.++.||+.||.||| +.||+||||||+||+++.+|.+||+|||
T Consensus 85 ~--~~~~ivmEy~~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH-~~~IiHRDiKP~NILl~~~~~vkl~DFG 157 (275)
T 3hyh_A 85 K--DEIIMVIEYAGNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp S--SEEEEEEECCCEEHHHHHHH----SCSCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCTTTEEECTTCCEEECCSS
T ss_pred C--CEEEEEEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCcccccCChHHeEECCCCCEEEeecC
Confidence 8 99999999998 78888843 468999999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCC-CcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCc
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNI 275 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~-~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~ 275 (852)
+++...+. ......+||+.|+|||++.+..| +.++|||||||++|+|++|..||.+.+. ...+
T Consensus 158 la~~~~~~-----~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p 232 (275)
T 3hyh_A 158 LSNIMTDG-----NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 232 (275)
T ss_dssp CC--------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC
T ss_pred CCeecCCC-----CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 99754321 12235689999999999976655 6799999999999999999999965422 2234
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
..+++.+.+++.+||..||.+|||+.++++| +||+..
T Consensus 233 ~~~s~~~~~li~~~L~~dP~~R~s~~eil~h-----pw~k~~ 269 (275)
T 3hyh_A 233 KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD-----DWFKVD 269 (275)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC-----HHHHTT
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHcC-----cccccC
Confidence 6789999999999999999999999999998 888653
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-46 Score=421.03 Aligned_cols=238 Identities=17% Similarity=0.225 Sum_probs=213.0
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
..|++.++|| .|+||+||+|+++.+|+.||||+++. ....+.+.+|+.+|+.|+||||++++++++++
T Consensus 151 ~~y~~~~~iG--------~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~-- 220 (423)
T 4fie_A 151 SYLDNFIKIG--------EGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-- 220 (423)
T ss_dssp GTEEEEEEEE--------ECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEET--
T ss_pred HhcEeeeEec--------cCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEEC--
Confidence 3499999999 99999999999999999999999987 34556789999999999999999999999988
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+.+|||||||. +|.+++.. +.+++..++.++.||+.||.||| +.|||||||||+|||++.+|.+||+|||++
T Consensus 221 ~~~~iVmEy~~gG~L~~~i~~-----~~l~e~~~~~~~~qil~aL~ylH-~~~IiHRDiKp~NILl~~~g~vKl~DFGla 294 (423)
T 4fie_A 221 DELWVVMEFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLH-AQGVIHRDIKSDSILLTHDGRVKLSDFGFC 294 (423)
T ss_dssp TEEEEEEECCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSTTTEEECTTCCEEECCCTTC
T ss_pred CEEEEEEeCCCCCcHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHH-HCCeecccCCHHHEEEcCCCCEEEecCccc
Confidence 99999999998 79998842 56999999999999999999999 899999999999999999999999999999
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------ccCc
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------LSNI 275 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------l~~~ 275 (852)
+.+... .......+||+.|+|||++.+..|+.++|||||||++|||++|..||.+... +...
T Consensus 295 ~~~~~~----~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~ 370 (423)
T 4fie_A 295 AQVSKE----VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNL 370 (423)
T ss_dssp EECCSS----CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCT
T ss_pred eECCCC----CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCccc
Confidence 855332 2223457899999999999888999999999999999999999999976432 2344
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
..+++.+.+||.+||..||.+|||+.++|+| +||.+
T Consensus 371 ~~~s~~~~dli~~~L~~dP~~R~ta~ell~H-----p~~~~ 406 (423)
T 4fie_A 371 HKVSPSLKGFLDRLLVRDPAQRATAAELLKH-----PFLAK 406 (423)
T ss_dssp TSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC-----GGGGG
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC-----HHhcC
Confidence 6789999999999999999999999999998 89864
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=417.23 Aligned_cols=241 Identities=17% Similarity=0.239 Sum_probs=205.3
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|+||+||+|+++.+|+.||||++++. ...+.+.+|+++|++|+||||++++++++++
T Consensus 24 e~Y~~~~~lG--------~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~ 95 (350)
T 4b9d_A 24 EKYVRLQKIG--------EGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN 95 (350)
T ss_dssp CCEEEEEEC--------------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred cceEEeEEEe--------cCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEEC
Confidence 3699999999 999999999999999999999999872 2346789999999999999999999999988
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+.+|||||||. +|.++|... ....+++..++.++.||+.||.||| +.|||||||||+|||++.+|.+||+|||
T Consensus 96 --~~~yiVmEy~~gg~L~~~i~~~--~~~~~~e~~~~~~~~qi~~aL~ylH-~~~IiHRDlKp~NILl~~~g~vKl~DFG 170 (350)
T 4b9d_A 96 --GSLYIVMDYCEGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHVH-DRKILHRDIKSQNIFLTKDGTVQLGDFG 170 (350)
T ss_dssp --TEEEEEEECCTTCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHH-HTTCEETTCCGGGEEECTTCCEEECSTT
T ss_pred --CEEEEEEeCCCCCcHHHHHHHc--CCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeccCCHHHEEECCCCCEEEcccc
Confidence 99999999998 899999532 2356789999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------cCc
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------SNI 275 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------~~~ 275 (852)
+++.+.... ......+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.+.. ...
T Consensus 171 la~~~~~~~----~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~ 246 (350)
T 4b9d_A 171 IARVLNSTV----ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVS 246 (350)
T ss_dssp EESCCCHHH----HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCC
T ss_pred cceeecCCc----ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCC
Confidence 998543211 1223467999999999998889999999999999999999999999764321 223
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
..+|+++.++|.+||..||.+|||+.++++| +||..
T Consensus 247 ~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h-----p~~~~ 282 (350)
T 4b9d_A 247 LHYSYDLRSLVSQLFKRNPRDRPSVNSILEK-----GFIAK 282 (350)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS-----HHHHT
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhcC-----HHhhc
Confidence 5788999999999999999999999999997 77754
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-45 Score=394.28 Aligned_cols=236 Identities=19% Similarity=0.209 Sum_probs=201.7
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC--
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP-- 129 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~-- 129 (852)
|++.+.|| .|+||+||+|+++.++..||||++.. ....+.+.+|+++|++|+||||+++++++++.
T Consensus 28 ~~~~~~iG--------~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~ 99 (290)
T 3fpq_A 28 LKFDIEIG--------RGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK 99 (290)
T ss_dssp EEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEET
T ss_pred EEeeeEEe--------cCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccC
Confidence 47888999 99999999999999999999999976 22345789999999999999999999998752
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC--ceecccCCCCEEEcc-CCcEEEc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDAD--LRHNHVNHTSIFINS-CGEWKLG 204 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~--ivH~DIkp~NIlV~~-~g~~KL~ 204 (852)
...++|||||||. +|.++|.+ .+.+++..+..++.||+.||.||| +.+ ||||||||+|||++. +|.+||+
T Consensus 100 ~~~~~~lvmEy~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH-~~~~~IiHRDlKp~NILl~~~~g~vKl~ 174 (290)
T 3fpq_A 100 GKKCIVLVTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLH-TRTPPIIHRDLKCDNIFITGPTGSVKIG 174 (290)
T ss_dssp TEEEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH-TSSSCCCCCCCCGGGEEESSTTSCEEEC
T ss_pred CCcEEEEEEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCCCEEecccChhheeEECCCCCEEEE
Confidence 2267999999998 79999953 267999999999999999999999 777 999999999999985 8999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------ 272 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------ 272 (852)
|||+++.... ......+||+.|+|||++.+ .|+.++|||||||++|||++|..||.+....
T Consensus 175 DFGla~~~~~------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~ 247 (290)
T 3fpq_A 175 DLGLATLKRA------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK 247 (290)
T ss_dssp CTTGGGGCCT------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC
T ss_pred eCcCCEeCCC------CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC
Confidence 9999874221 12335689999999999865 5899999999999999999999999653221
Q ss_pred --cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 --SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 --~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....+++++.++|.+||..||.+|||+.++++| +||+.
T Consensus 248 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H-----p~~~~ 288 (290)
T 3fpq_A 248 PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH-----AFFQE 288 (290)
T ss_dssp CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS-----GGGC-
T ss_pred CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC-----ccccC
Confidence 1224567899999999999999999999999998 89975
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=400.18 Aligned_cols=239 Identities=15% Similarity=0.218 Sum_probs=202.7
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEc---CCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKK---GSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k---~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
.|++++.|| .|+||+||+|++. .+++.||||++++ ......+.+|+++|++|+||||++++++++
T Consensus 25 ~Y~i~~~lG--------~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 96 (304)
T 3ubd_A 25 QFELLKVLG--------QGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQ 96 (304)
T ss_dssp GEEEEEEEE--------CGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEE
T ss_pred ccEEEEEEe--------cCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEE
Confidence 599999999 9999999999984 4678999999986 222346788999999999999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
++ +.+|||||||. +|.++|.+ .+.+++..++.++.||+.||.||| +.||+||||||+|||++.+|.+||+|
T Consensus 97 ~~--~~~~ivmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH-~~~IiHRDlKp~NILl~~~g~vKl~D 169 (304)
T 3ubd_A 97 TE--GKLYLILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLH-SLGIIYRDLKPENILLDEEGHIKLTD 169 (304)
T ss_dssp ET--TEEEEEECCCTTCEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSSCCGGGEEECTTSCEEEES
T ss_pred EC--CEEEEEEEcCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCCcCCCCCHHHeEEcCCCCEEecc
Confidence 98 99999999998 79999853 267999999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccC
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSN 274 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~ 274 (852)
||+++...+. .......+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.+. ...
T Consensus 170 FGla~~~~~~----~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~ 245 (304)
T 3ubd_A 170 FGLSKESIDH----EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM 245 (304)
T ss_dssp SEEEEC---------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred cccceeccCC----CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCC
Confidence 9999744321 1223357899999999999888899999999999999999999999976432 234
Q ss_pred cCCCChhHHHHHHHhccCCCCCCCC-----HHHHHHhhcCCCCCCcch
Q psy3914 275 IDNIPENLKRVYLELISERPNQRPN-----PADFIMRNRKPGGYFKND 317 (852)
Q Consensus 275 ~~~ip~~L~~li~~lL~~nP~~Rps-----~~elL~~l~~~~~fF~n~ 317 (852)
+..+|+++.++|++||..||++||| ++++++| +||++.
T Consensus 246 p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H-----p~f~~i 288 (304)
T 3ubd_A 246 PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH-----SFFSTI 288 (304)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS-----GGGTTC
T ss_pred CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC-----ccccCC
Confidence 5678999999999999999999998 5789987 899864
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=399.18 Aligned_cols=235 Identities=12% Similarity=0.077 Sum_probs=202.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLV 134 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~ 134 (852)
.|++.++|| .|+||+||+|+++.+|+.||||+++.+.. ..+|+.+|+.|+||||++++++++++ +.+
T Consensus 59 ~~~~~~~lG--------~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---~~~E~~il~~l~HpnIV~l~~~~~~~--~~~ 125 (336)
T 4g3f_A 59 WMTHQPRVG--------RGSFGEVHRMKDKQTGFQCAVKKVRLEVF---RVEELVACAGLSSPRIVPLYGAVREG--PWV 125 (336)
T ss_dssp EEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEETTTC---CTHHHHTTTTCCCTTBCCEEEEEEET--TEE
T ss_pred heEeCcEec--------cCCCeEEEEEEECCCCCEEEEEEECHHHh---HHHHHHHHHhCCCCCCCcEEEEEEEC--CEE
Confidence 489999999 99999999999999999999999987432 25799999999999999999999988 999
Q ss_pred EEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC-cEEEcccchhhc
Q psy3914 135 YLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG-EWKLGGLEYMEK 211 (852)
Q Consensus 135 yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g-~~KL~DFg~a~~ 211 (852)
|||||||. +|.++|.+. +.+++..+..++.||+.||.||| +.+||||||||+|||++.+| .+||+|||+++.
T Consensus 126 ~ivmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH-~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~ 200 (336)
T 4g3f_A 126 NIFMELLEGGSLGQLIKQM----GCLPEDRALYYLGQALEGLEYLH-TRRILHGDVKADNVLLSSDGSRAALCDFGHALC 200 (336)
T ss_dssp EEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH-TTTEECSCCCGGGEEECTTSCCEEECCCTTCEE
T ss_pred EEEEeccCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH-HCCceecccCHHHEEEeCCCCEEEEeeCCCCeE
Confidence 99999998 799999532 67999999999999999999999 99999999999999999998 599999999986
Q ss_pred cccccC-CCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------cCcC
Q psy3914 212 ISEASC-IPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------SNID 276 (852)
Q Consensus 212 ~~~~~~-~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------~~~~ 276 (852)
+..... .........+||+.|+|||++.+..|+.++|||||||++|||++|.+||.+.... ....
T Consensus 201 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 280 (336)
T 4g3f_A 201 LQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPP 280 (336)
T ss_dssp C------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCT
T ss_pred ccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCc
Confidence 543221 1111223467999999999998889999999999999999999999999654321 2346
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.+|+.+.++|.+||..||.+|||+.++++++
T Consensus 281 ~~s~~~~~li~~~L~~dP~~R~sa~el~~~l 311 (336)
T 4g3f_A 281 SCAPLTAQAIQEGLRKEPVHRASAMELRRKV 311 (336)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cCCHHHHHHHHHHccCCHhHCcCHHHHHHHH
Confidence 7889999999999999999999999999875
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=406.49 Aligned_cols=245 Identities=16% Similarity=0.252 Sum_probs=206.5
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++++.|| .|+||+||+|+++.+|+.||||+++.. .....+.+|+++|+.|+||||+++++++...
T Consensus 54 ~~Y~~~~~lG--------~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 125 (398)
T 4b99_A 54 DEYEIIETIG--------NGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPT 125 (398)
T ss_dssp SSEEEEEEEE--------ECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCS
T ss_pred CCeEEEEEEe--------cccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecc
Confidence 3699999999 999999999999999999999999762 2335678999999999999999999998643
Q ss_pred ----CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 130 ----SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 130 ----~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
..+.+|||||||. +|.+++. ..+.+++..++.+++||+.||.||| +.|||||||||+|||++.+|.+||+
T Consensus 126 ~~~~~~~~~~ivmE~~~g~L~~~i~----~~~~l~~~~~~~~~~qil~al~ylH-~~~iiHRDlKP~NIl~~~~~~~Ki~ 200 (398)
T 4b99_A 126 VPYGEFKSVYVVLDLMESDLHQIIH----SSQPLTLEHVRYFLYQLLRGLKYMH-SAQVIHRDLKPSNLLVNENCELKIG 200 (398)
T ss_dssp SCTTTCCCEEEEEECCSEEHHHHHT----SSSCCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTCCEEEC
T ss_pred cccccCCEEEEEEeCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH-HCcCcCCCcCccccccCCCCCEEEe
Confidence 2267999999999 7888883 3468999999999999999999999 9999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC---------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN--------- 274 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~--------- 274 (852)
|||+++.+..............+||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+...+
T Consensus 201 DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g 280 (398)
T 4b99_A 201 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLG 280 (398)
T ss_dssp CCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHC
T ss_pred ecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcC
Confidence 999998654332222333446789999999999855 4678999999999999999999999976432110
Q ss_pred ---------------------------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 275 ---------------------------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 275 ---------------------------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
...+++.+.+||++||..||.+|||+.++|+| +||+.
T Consensus 281 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H-----p~f~~ 350 (398)
T 4b99_A 281 TPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH-----PFLAK 350 (398)
T ss_dssp CCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS-----GGGTT
T ss_pred CCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC-----HhhCc
Confidence 13567889999999999999999999999998 88864
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-43 Score=385.31 Aligned_cols=241 Identities=15% Similarity=0.144 Sum_probs=198.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEc-----CCCeEEEEEEEeCC--CchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK-----GSNEKVTIFLNDSA--DTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k-----~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
..|.+.++|| +|+||+||+|+.+ .++..||||+++.. ...+.+.+|+++|++|+||||+++++++
T Consensus 41 ~d~~l~~~LG--------~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~ 112 (329)
T 4aoj_A 41 RDIVLKWELG--------EGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVC 112 (329)
T ss_dssp GGEEEEEEEE--------ECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred HHeEEEEEEc--------cCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 4588999999 9999999999865 36899999999862 2346789999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhh-----------hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCE
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTL-----------KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSI 193 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~-----------~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NI 193 (852)
.+. ..+|||||||. +|.++|.+.. ...+.+++.++..++.||+.||.||| +.+||||||||+||
T Consensus 113 ~~~--~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH-~~~iiHRDLKp~NI 189 (329)
T 4aoj_A 113 TEG--RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA-GLHFVHRDLATRNC 189 (329)
T ss_dssp CSS--SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGE
T ss_pred EEC--CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh-cCCeecccccHhhE
Confidence 987 88999999999 8999996432 12356899999999999999999999 89999999999999
Q ss_pred EEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCc--
Q psy3914 194 FINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRK-- 270 (852)
Q Consensus 194 lV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~-- 270 (852)
|++.++.+||+|||+++...... .........||+.|+|||++.+..|+.++|||||||++|||++ |..||.+..
T Consensus 190 Ll~~~~~~Ki~DFGla~~~~~~~--~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~ 267 (329)
T 4aoj_A 190 LVGQGLVVKIGDFGMSRDIYSTD--YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 267 (329)
T ss_dssp EEETTTEEEECCCC------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH
T ss_pred EECCCCcEEEcccccceeccCCC--cceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH
Confidence 99999999999999998543221 1112234678999999999988899999999999999999999 899996542
Q ss_pred ----------cccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 271 ----------SLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 271 ----------~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.+..+..+|+.+.+++.+||+.||++|||+.++++++
T Consensus 268 ~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L 314 (329)
T 4aoj_A 268 EAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 314 (329)
T ss_dssp HHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHH
Confidence 2334578999999999999999999999999999875
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=384.19 Aligned_cols=240 Identities=15% Similarity=0.173 Sum_probs=202.2
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEc-----CCCeEEEEEEEeCC--CchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK-----GSNEKVTIFLNDSA--DTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k-----~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
..|.+++.|| .|+||+||+|+.+ .++..||||+++.. ...+.+.+|+++|++|+||||+++++++
T Consensus 13 ~~~~l~~~lG--------~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~ 84 (299)
T 4asz_A 13 HNIVLKRELG--------EGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVC 84 (299)
T ss_dssp GGEEEEEEEE--------C--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred HHeEEeeEEe--------eCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEE
Confidence 4599999999 9999999999875 36889999999862 2345789999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhh---------hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTL---------KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI 195 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~---------~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV 195 (852)
.+. +.+|||||||. +|.++|.+.. .....+++..+..++.||+.||.||| +.+||||||||+|||+
T Consensus 85 ~~~--~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH-~~~iiHRDlKp~NILl 161 (299)
T 4asz_A 85 VEG--DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA-SQHFVHRDLATRNCLV 161 (299)
T ss_dssp CSS--SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEE
T ss_pred eeC--CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCccCHhhEEE
Confidence 987 88999999998 8999996432 22357999999999999999999999 8999999999999999
Q ss_pred ccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc---
Q psy3914 196 NSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS--- 271 (852)
Q Consensus 196 ~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~--- 271 (852)
+.++.+||+|||+++....... ........||+.|+|||++.+..|+.++|||||||++|||++ |..||.+...
T Consensus 162 ~~~~~~Ki~DFGla~~~~~~~~--~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~ 239 (299)
T 4asz_A 162 GENLLVKIGDFGMSRDVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 239 (299)
T ss_dssp CGGGCEEECCCSCHHHHTGGGC--EEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred CCCCcEEECCcccceecCCCCc--eeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 9999999999999985432211 112223468899999999988889999999999999999998 8999965422
Q ss_pred ---------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 272 ---------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 272 ---------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
...+..+|+.+.+++.+||+.||++|||+.++++.
T Consensus 240 ~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~ 283 (299)
T 4asz_A 240 IECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTL 283 (299)
T ss_dssp HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 23456889999999999999999999999999764
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-43 Score=381.07 Aligned_cols=241 Identities=18% Similarity=0.214 Sum_probs=205.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEc-----CCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKK-----GSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k-----~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
.+++.++|| .|+||+||+|+.. .+++.||||+++. ....+.+.+|+.+|++|+||||+++++++
T Consensus 27 ~~~~~~~lG--------~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~ 98 (308)
T 4gt4_A 27 AVRFMEELG--------EDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVV 98 (308)
T ss_dssp GEEEEEEEE--------ECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred HCeEeeEec--------cCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEE
Confidence 478899999 9999999999863 4678999999976 33457899999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhh------------hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCC
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTL------------KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTS 192 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~------------~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~N 192 (852)
.++ ..+|||||||. +|.++|.... .....+++..+..++.||+.||.||| +.+||||||||+|
T Consensus 99 ~~~--~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH-~~~iiHRDLK~~N 175 (308)
T 4gt4_A 99 TKD--QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS-SHHVVHKDLATRN 175 (308)
T ss_dssp CSS--SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGG
T ss_pred EEC--CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH-hCCCCCCCccccc
Confidence 987 88999999998 8999995321 12356899999999999999999999 8999999999999
Q ss_pred EEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc
Q psy3914 193 IFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS 271 (852)
Q Consensus 193 IlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~ 271 (852)
|||+.++.+||+|||+++....... ........||+.|+|||++.+..|+.++|||||||++|||++ |..||.+...
T Consensus 176 ILl~~~~~~Ki~DFGlar~~~~~~~--~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~ 253 (308)
T 4gt4_A 176 VLVYDKLNVKISDLGLFREVYAADY--YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 253 (308)
T ss_dssp EEECGGGCEEECCSCCBCGGGGGGC--BCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH
T ss_pred eEECCCCCEEECCcccceeccCCCc--eeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999885533211 122334678999999999988889999999999999999998 8999965422
Q ss_pred ------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 272 ------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 272 ------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
...+..+|+.+.+++.+||+.||.+|||+.+++++++
T Consensus 254 ~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~ 302 (308)
T 4gt4_A 254 QDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302 (308)
T ss_dssp HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 2345688999999999999999999999999999876
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-43 Score=383.19 Aligned_cols=245 Identities=17% Similarity=0.245 Sum_probs=189.8
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeEEcCC-
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSVESPS- 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~- 130 (852)
.|++.+.|| .|+||+||+|+++.+|+.||||+++... ..+.+.+|+++|++|+||||+++++++.+..
T Consensus 6 dy~~~~~lG--------~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~ 77 (299)
T 4g31_A 6 DFEPIQCLG--------RGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNT 77 (299)
T ss_dssp HEEEEEEEE--------ECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-
T ss_pred hCEEeeEEe--------cCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCc
Confidence 499999999 9999999999999999999999997622 3356889999999999999999999987541
Q ss_pred ---------CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC
Q psy3914 131 ---------KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG 199 (852)
Q Consensus 131 ---------~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g 199 (852)
..++|||||||. +|.+++.... .........+..++.||+.||.||| +.||+||||||+|||++.+|
T Consensus 78 ~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH-~~~IiHRDlKp~NILl~~~~ 155 (299)
T 4g31_A 78 TEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLH-SKGLMHRDLKPSNIFFTMDD 155 (299)
T ss_dssp ---------CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTC
T ss_pred cccccccCCCcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHH-HCcCccccCcHHHeEECCCC
Confidence 125899999998 7999995321 1123455678899999999999999 89999999999999999999
Q ss_pred cEEEcccchhhccccccCC--------CCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc
Q psy3914 200 EWKLGGLEYMEKISEASCI--------PMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS 271 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~--------~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~ 271 (852)
.+||+|||+++.+...... ........+||+.|+|||++.+..|+.++|||||||++|||++ ||.+...
T Consensus 156 ~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~ 232 (299)
T 4g31_A 156 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME 232 (299)
T ss_dssp CEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH
T ss_pred cEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH
Confidence 9999999999865432211 1112234679999999999988899999999999999999996 6643211
Q ss_pred -cc------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 272 -LS------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 272 -l~------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.. .+...++.+.+++++||..||.+|||+.++++| +||++.
T Consensus 233 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h-----~~~~~~ 286 (299)
T 4g31_A 233 RVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN-----AVFEDL 286 (299)
T ss_dssp HHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS-----GGGCCC
T ss_pred HHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC-----HhhCCC
Confidence 00 011234557789999999999999999999997 888763
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=388.22 Aligned_cols=242 Identities=13% Similarity=0.196 Sum_probs=203.3
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEc---CCCeEEEEEEEeCCCchHHHHHHHHHHHhC-CCCCcceEeeeEEc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK---GSNEKVTIFLNDSADTYEPALSYVKKLKTL-RHPSILTFLDSVES 128 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k---~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~ 128 (852)
...|++++.|| .|+||+||+|+++ .+++.||||++........+.+|+++|+.+ +||||+++++++++
T Consensus 20 ~~~Y~i~~~lG--------~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 20 SNVFKIEDKIG--------EGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp GGTCEEEEEEE--------ECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred cCcEEEEEEEe--------cccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 34699999999 9999999999876 457899999998766677889999999998 59999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC-CcEEEcc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC-GEWKLGG 205 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~-g~~KL~D 205 (852)
. +++||||||+. +|.+++ ..+++.+++.+++||+.||.||| +.||+||||||+|||++.+ |.+||+|
T Consensus 92 ~--~~~~lvmE~~~g~~L~~~~-------~~l~~~~~~~~~~qll~al~ylH-~~gIiHRDiKPeNiLl~~~~~~~kl~D 161 (361)
T 4f9c_A 92 N--DHVVIAMPYLEHESFLDIL-------NSLSFQEVREYMLNLFKALKRIH-QFGIVHRDVKPSNFLYNRRLKKYALVD 161 (361)
T ss_dssp T--TEEEEEEECCCCCCHHHHH-------TTCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEETTTTEEEECC
T ss_pred C--CEEEEEEeCCCcccHHHHH-------cCCCHHHHHHHHHHHHHHHHHHH-HCCeEeCcCCHHHeEEeCCCCeEEECc
Confidence 8 99999999998 798888 45899999999999999999999 9999999999999999876 8999999
Q ss_pred cchhhccccccCC------------------------CCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHH
Q psy3914 206 LEYMEKISEASCI------------------------PMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVF 260 (852)
Q Consensus 206 Fg~a~~~~~~~~~------------------------~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~ 260 (852)
||+++...+.... ........+||+.|+|||++.+ ..|+.++||||+||++|||+
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell 241 (361)
T 4f9c_A 162 FGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241 (361)
T ss_dssp CTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHH
Confidence 9999754321100 0111234579999999999854 46899999999999999999
Q ss_pred hCCCCCCCCcc-c-----------------------------------------------------------------cC
Q psy3914 261 NGPLQSTNRKS-L-----------------------------------------------------------------SN 274 (852)
Q Consensus 261 tG~~pf~~~~~-l-----------------------------------------------------------------~~ 274 (852)
+|..||.+..+ . ..
T Consensus 242 ~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 321 (361)
T 4f9c_A 242 SGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEG 321 (361)
T ss_dssp HTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------
T ss_pred HCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccc
Confidence 99999843211 0 11
Q ss_pred cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 275 IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 275 ~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
...+++++.+|+++||..||++|+|+.++|+| +||++.
T Consensus 322 ~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~H-----p~f~~i 359 (361)
T 4f9c_A 322 WNEVPDEAYDLLDKLLDLNPASRITAEEALLH-----PFFKDM 359 (361)
T ss_dssp CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTS-----GGGTTC
T ss_pred cccCCHHHHHHHHHHCcCChhHCcCHHHHhcC-----cccCCC
Confidence 24578899999999999999999999999998 999863
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-42 Score=375.54 Aligned_cols=234 Identities=17% Similarity=0.260 Sum_probs=193.2
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
..|+++++|| .|+||+||+|+.+. .||||+++. ....+.+.+|+++|++|+||||+++++++..
T Consensus 36 ~~l~l~~~iG--------~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~- 103 (307)
T 3omv_A 36 SEVMLSTRIG--------SGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK- 103 (307)
T ss_dssp TSCCEEEECC--------CCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-
T ss_pred HHeEEeeEEe--------eCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-
Confidence 3578999999 99999999998643 599999876 2234678999999999999999999998754
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+.+|||||||. +|.++|.. ....+++..+..++.||+.||.||| +.+||||||||+|||++.++.+||+|||
T Consensus 104 --~~~~iVmEy~~gGsL~~~l~~---~~~~l~~~~~~~i~~qia~gL~yLH-~~~IiHRDlKp~NILl~~~~~~Ki~DFG 177 (307)
T 3omv_A 104 --DNLAIVTQWCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLH-AKNIIHRDMKSNNIFLHEGLTVKIGDFG 177 (307)
T ss_dssp --SSCEEEEECCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHH-HTTCBCSCCCSSSEEEETTEEEEECCCS
T ss_pred --CeEEEEEEcCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHH-HCCccCCccCHHHEEECCCCcEEEeecc
Confidence 56899999998 79999843 2367999999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCcccc---CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSL---SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------ 272 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------ 272 (852)
+++....... ........||+.|+|||++. ...|+.++|||||||++|||++|..||.+....
T Consensus 178 la~~~~~~~~--~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~ 255 (307)
T 3omv_A 178 LATVKSRWSG--SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA 255 (307)
T ss_dssp SCBC--------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCC
T ss_pred CceecccCCc--ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCC
Confidence 9875432111 12223467999999999984 345889999999999999999999999653221
Q ss_pred -----cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 273 -----SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 273 -----~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.....+|+.+.+++.+||+.||.+|||+.++++++
T Consensus 256 ~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L 295 (307)
T 3omv_A 256 SPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSI 295 (307)
T ss_dssp CCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHH
T ss_pred CCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 12356889999999999999999999999998864
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-41 Score=398.97 Aligned_cols=244 Identities=14% Similarity=0.194 Sum_probs=210.5
Q ss_pred CCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHH---HHHHHhCCCCCcce
Q psy3914 50 ASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSY---VKKLKTLRHPSILT 121 (852)
Q Consensus 50 p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E---~~~Lk~LrHPnIlk 121 (852)
+..-..|++++.|| .|+||+||+|+++.+|+.||||++++ ......+.+| +.+++.++||||++
T Consensus 185 ~~slddf~i~k~LG--------~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~ 256 (689)
T 3v5w_A 185 HLTMNDFSVHRIIG--------RGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256 (689)
T ss_dssp CCCGGGEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCC
T ss_pred CCchHHeEEEEEEe--------cccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeE
Confidence 45556799999999 99999999999999999999999986 3334444444 56677789999999
Q ss_pred EeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC
Q psy3914 122 FLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG 199 (852)
Q Consensus 122 ~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g 199 (852)
+++++++. +++|||||||. +|..+|.+ .+.+++..++.++.||+.||.||| +.|||||||||+|||++.+|
T Consensus 257 l~~~f~~~--~~lylVmEy~~GGdL~~~l~~----~~~l~E~~a~~y~~qIl~aL~yLH-~~gIiHRDLKPeNILld~~G 329 (689)
T 3v5w_A 257 MSYAFHTP--DKLSFILDLMNGGDLHYHLSQ----HGVFSEADMRFYAAEIILGLEHMH-NRFVVYRDLKPANILLDEHG 329 (689)
T ss_dssp EEEEEECS--SEEEEEECCCCSCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHH-TTTEECCCCSGGGEEECTTS
T ss_pred EEEEEEEC--CEEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCchHHeEEeCCC
Confidence 99999988 99999999998 79999953 267999999999999999999999 99999999999999999999
Q ss_pred cEEEcccchhhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-------
Q psy3914 200 EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS------- 271 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------- 271 (852)
.+||+|||+++.+... .....+||+.|+|||++. +..|+.++|+|||||++|||++|.+||.+...
T Consensus 330 ~vKL~DFGlA~~~~~~------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~ 403 (689)
T 3v5w_A 330 HVRISDLGLACDFSKK------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID 403 (689)
T ss_dssp CEEECCCTTCEECSSC------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHH
T ss_pred CEEecccceeeecCCC------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 9999999999754321 223568999999999994 56899999999999999999999999965321
Q ss_pred -------ccCcCCCChhHHHHHHHhccCCCCCCCC-----HHHHHHhhcCCCCCCcchHH
Q psy3914 272 -------LSNIDNIPENLKRVYLELISERPNQRPN-----PADFIMRNRKPGGYFKNDLI 319 (852)
Q Consensus 272 -------l~~~~~ip~~L~~li~~lL~~nP~~Rps-----~~elL~~l~~~~~fF~n~lv 319 (852)
...+..++++++++|.+||..||.+|++ +.++++| +||++.-.
T Consensus 404 ~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H-----pfF~~idW 458 (689)
T 3v5w_A 404 RMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES-----PFFRSLDW 458 (689)
T ss_dssp HHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS-----GGGTTCCH
T ss_pred HhhcCCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC-----ccccCCCH
Confidence 2235678999999999999999999998 6899987 99987543
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=376.05 Aligned_cols=242 Identities=17% Similarity=0.271 Sum_probs=203.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCC-----eEEEEEEEeCC---CchHHHHHHHHHHHhCCC-CCcceEee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN-----EKVTIFLNDSA---DTYEPALSYVKKLKTLRH-PSILTFLD 124 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g-----~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrH-PnIlk~~d 124 (852)
.+|++++.|| .|+||+||+|+.+.++ +.||||++... .....+.+|+++|++++| |||+++++
T Consensus 64 ~~~~l~~~LG--------~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 64 DRLKLGKPLG--------RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp GGEEEEEEEE--------ECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred HHeEEeeEEe--------cCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 4699999999 9999999999987543 68999999762 234568899999999976 99999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCC
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLK------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNH 190 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp 190 (852)
++.+. ...+|||||||. +|.++|++... ....+++..+..++.||+.||.||| +.+||||||||
T Consensus 136 ~~~~~-~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH-~~~iiHRDLK~ 213 (353)
T 4ase_A 136 ACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAA 213 (353)
T ss_dssp EECCT-TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSG
T ss_pred EEEec-CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh-hCCeecCccCc
Confidence 98653 257999999998 89999964322 1345889999999999999999999 89999999999
Q ss_pred CCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCC
Q psy3914 191 TSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNR 269 (852)
Q Consensus 191 ~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~ 269 (852)
+|||++.++.+||+|||+++.+.... .........||+.|+|||++.+..|+.++|||||||++|||++ |..||.+.
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~--~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDP--DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCT--TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred cceeeCCCCCEEECcchhhhhcccCC--CceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999998543221 1222334678899999999988889999999999999999998 89999654
Q ss_pred cc-------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 270 KS-------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 270 ~~-------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.. +..+..+|+.+.+++.+||+.||.+|||+.++++|+
T Consensus 292 ~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L 342 (353)
T 4ase_A 292 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342 (353)
T ss_dssp CCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHH
Confidence 22 233567899999999999999999999999999985
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-41 Score=395.59 Aligned_cols=238 Identities=16% Similarity=0.247 Sum_probs=210.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC--CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA--DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
+|++++.|| .|+||.||+|+++.+|+.||||++... ...+.+.+|+++|+.|+||||+++++++++. .
T Consensus 158 ~Y~i~~~lG--------~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~ 227 (573)
T 3uto_A 158 HYDIHEELG--------TGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD--N 227 (573)
T ss_dssp TEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECS--S
T ss_pred ccEEEEEEe--------eccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEEC--C
Confidence 699999999 999999999999999999999999873 2346788999999999999999999999988 9
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC--CcEEEcccch
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC--GEWKLGGLEY 208 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~--g~~KL~DFg~ 208 (852)
.+|||||||. +|.++|.+ ..+.+++.+++.++.||+.||.||| +.+|+||||||+||+++.+ |.+||+|||+
T Consensus 228 ~~~iv~E~~~gg~L~~~i~~---~~~~l~e~~~~~~~~qi~~al~ylH-~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~ 303 (573)
T 3uto_A 228 EMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMH-ENNYVHLDLKPENIMFTTKRSNELKLIDFGL 303 (573)
T ss_dssp EEEEEEECCCCCBHHHHHTC---TTSCEEHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEESSSSCCCEEECCCSS
T ss_pred EEEEEEeecCCCcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeccCChhhccccCCCCCCEEEeeccc
Confidence 9999999998 79888832 2357999999999999999999999 9999999999999999864 8999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------------c
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------S 273 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------~ 273 (852)
++.+.. .......+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.... .
T Consensus 304 a~~~~~-----~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~ 378 (573)
T 3uto_A 304 TAHLDP-----KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDS 378 (573)
T ss_dssp CEECCT-----TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSG
T ss_pred eeEccC-----CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcc
Confidence 986532 12233568999999999998889999999999999999999999999754321 1
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+++||++||..||.+||++.++|+| +||+.
T Consensus 379 ~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H-----pw~~~ 416 (573)
T 3uto_A 379 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEH-----PWLTP 416 (573)
T ss_dssp GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS-----TTTSC
T ss_pred cccCCCHHHHHHHHHHccCChhHCcCHHHHhcC-----cCcCC
Confidence 235789999999999999999999999999998 89964
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=362.22 Aligned_cols=237 Identities=16% Similarity=0.170 Sum_probs=185.5
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCch-HHHHHHHHHHHhCCCCCcceEeeeEEcCCC--
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTY-EPALSYVKKLKTLRHPSILTFLDSVESPSK-- 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~-~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~-- 131 (852)
.|.++++|| .|+||+||+|+. +|+.||||+++..... ...++|+..+..|+||||+++++++.++..
T Consensus 4 ~i~L~~~iG--------~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~ 73 (303)
T 3hmm_A 4 TIVLQESIG--------KGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73 (303)
T ss_dssp GEEEEEEEE--------ECSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSS
T ss_pred EEEEEEEEe--------eCCCeEEEEEEE--CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCc
Confidence 489999999 999999999988 6899999999873222 233456777778999999999999886521
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--------CceecccCCCCEEEccCCcE
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDA--------DLRHNHVNHTSIFINSCGEW 201 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~--------~ivH~DIkp~NIlV~~~g~~ 201 (852)
..+||||||+. +|.++|.+ ..+++..+..++.||+.||.||| .. +||||||||+|||++.+|.+
T Consensus 74 ~~~~lV~Ey~~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH-~~~~~~~~~~~IiHRDlKp~NILl~~~~~~ 147 (303)
T 3hmm_A 74 TQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLH-MEIVGTQGKPAIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEEEEEEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHH-CCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred eEEEEEecCCCCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH-HhhhhccCCCCEeeccCCcccEEECCCCCE
Confidence 36899999998 79999943 46889999999999999999999 55 89999999999999999999
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccccCC------CCCcchhHHhHHHHHHHHHhCCCCCCCCcccc--
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSH------VTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS-- 273 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~------~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~-- 273 (852)
||+|||+++.................||+.|+|||++.+. .++.++|||||||++|||++|..||.......
T Consensus 148 Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p 227 (303)
T 3hmm_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp EECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCT
T ss_pred EEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccccc
Confidence 9999999875543222212222346799999999998543 35678999999999999999976653211100
Q ss_pred ----------------------CcCCCC---------hhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 274 ----------------------NIDNIP---------ENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 274 ----------------------~~~~ip---------~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
....+| +.+.+++.+||+.||++|||+.++++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L 292 (303)
T 3hmm_A 228 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 292 (303)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHH
T ss_pred chhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHH
Confidence 001233 3578999999999999999999998864
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-39 Score=346.40 Aligned_cols=238 Identities=16% Similarity=0.211 Sum_probs=209.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.+|++.+.|| .|++|+||+|.++.+|+.|+||++.. ....+.+.+|+.+++.++||||+++++++...
T Consensus 20 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 89 (297)
T 3fxz_A 20 KKYTRFEKIG--------QGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-- 89 (297)
T ss_dssp GTBCCCEEEE--------EETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEET--
T ss_pred hceeeeeeec--------cCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEEC--
Confidence 4699999999 99999999999999999999999976 44567889999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+.+|+||||+. +|.+++.+ ..+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|||++
T Consensus 90 ~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 163 (297)
T 3fxz_A 90 DELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLH-SNQVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (297)
T ss_dssp TEEEEEEECCTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred CEEEEEEECCCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHH-hCCceeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 89999999997 79998843 46899999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------ccCc
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------LSNI 275 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------l~~~ 275 (852)
...... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+... ....
T Consensus 164 ~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (297)
T 3fxz_A 164 AQITPE----QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP 239 (297)
T ss_dssp EECCST----TCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCG
T ss_pred eecCCc----ccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCc
Confidence 754322 1223346789999999999888899999999999999999999999965432 2335
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
..+++.+.+++.+||..||.+|||+.++++| +||+.
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h-----~~~~~ 275 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH-----QFLKI 275 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC-----GGGGG
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhhC-----hhhcc
Confidence 6788999999999999999999999999997 88864
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=349.72 Aligned_cols=238 Identities=15% Similarity=0.264 Sum_probs=207.4
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|++|.||.|+++.+|+.|+||++... .....+.+|+++|+.++||||+++++++++.
T Consensus 15 ~~y~~~~~lG--------~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 86 (328)
T 3fe3_A 15 GNYRLLKTIG--------KGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE 86 (328)
T ss_dssp TTEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred CCEEEEEEEe--------eCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence 4699999999 999999999999999999999999862 2345678999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+.+|+||||+. +|.+++... +.+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||
T Consensus 87 --~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~al~~lH-~~~ivHrDlkp~NIll~~~~~~kl~DFG 159 (328)
T 3fe3_A 87 --KTLYLIMEYASGGEVFDYLVAH----GRMKEKEARSKFRQIVSAVQYCH-QKRIVHRDLKAENLLLDADMNIKIADFG 159 (328)
T ss_dssp --SEEEEEECCCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTSCEEECSTT
T ss_pred --CEEEEEEECCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH-HCCEeccCCCHHHEEEcCCCCEEEeecc
Confidence 89999999997 798888432 67999999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCC-CcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCc
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNI 275 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~-~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~ 275 (852)
++...... .......||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+... ...+
T Consensus 160 ~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p 234 (328)
T 3fe3_A 160 FSNEFTVG-----GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234 (328)
T ss_dssp CCGGGSSS-----CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred CceecCCC-----CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 98754321 22335678999999999966555 4789999999999999999999965432 2334
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
..+++.+.+++++||..||.+|||+.++++| +||+.
T Consensus 235 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~h-----~~~~~ 270 (328)
T 3fe3_A 235 FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD-----RWINA 270 (328)
T ss_dssp TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC-----TTTTT
T ss_pred CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC-----HhhcC
Confidence 5678999999999999999999999999997 88864
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-38 Score=347.90 Aligned_cols=240 Identities=16% Similarity=0.251 Sum_probs=210.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.+|++.+.|| .|++|+||.|+++.+|+.||||++.+ ......+.+|+++|+.++||||+++++++++
T Consensus 5 ~~y~~~~~lG--------~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~ 76 (337)
T 1o6l_A 5 NDFDYLKLLG--------KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT 76 (337)
T ss_dssp GGEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC
T ss_pred HHeEEEEEEe--------cCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe
Confidence 3599999999 99999999999999999999999976 4556788999999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. ..+||||||+. +|..++.+ .+.+++..++.++.||+.||.||| +.||+||||||+||+++.+|.+||+||
T Consensus 77 ~--~~~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~g~vkL~DF 149 (337)
T 1o6l_A 77 H--DRLCFVMEYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLH-SRDVVYRDIKLENLMLDKDGHIKITDF 149 (337)
T ss_dssp S--SEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTSCEEECCC
T ss_pred C--CEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCcCCHHHEEECCCCCEEEeec
Confidence 8 89999999998 79888843 257899999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNI 275 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~ 275 (852)
|++...... ........||+.|+|||++.+..++.++|+|||||++|||++|..||.+... ...+
T Consensus 150 G~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p 225 (337)
T 1o6l_A 150 GLCKEGISD----GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 225 (337)
T ss_dssp TTCBCSCCT----TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred cchhhcccC----CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 998742211 1223356789999999999888899999999999999999999999965422 2234
Q ss_pred CCCChhHHHHHHHhccCCCCCCC-----CHHHHHHhhcCCCCCCcch
Q psy3914 276 DNIPENLKRVYLELISERPNQRP-----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n~ 317 (852)
..+++.+.++|.+||..||.+|| ++.++++| +||.+.
T Consensus 226 ~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h-----~~f~~~ 267 (337)
T 1o6l_A 226 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH-----RFFLSI 267 (337)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS-----GGGTTC
T ss_pred CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC-----CCcCCC
Confidence 67899999999999999999999 89999998 899764
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-38 Score=339.29 Aligned_cols=240 Identities=20% Similarity=0.271 Sum_probs=204.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|++|+||+|+++.+|+.|+||++.. ......+.+|+.+++.++||||+++++++.++
T Consensus 3 ~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 73 (292)
T 3o0g_A 3 KYEKLEKIG--------EGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD- 73 (292)
T ss_dssp SEEEEEEEE--------ECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-
T ss_pred CceeeeEec--------CCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeC-
Confidence 599999999 99999999999999999999999986 23346788999999999999999999999988
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+.+||||||+. +|..++.. ..+.+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|||++
T Consensus 74 -~~~~lv~e~~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH-~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 148 (292)
T 3o0g_A 74 -KKLTLVFEFCDQDLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCH-SRNVLHRDLKPQNLLINRNGELKLANFGLA 148 (292)
T ss_dssp -TEEEEEEECCSEEHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred -CEEEEEEecCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 89999999999 67766632 2467999999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCC-CCCcchhHHhHHHHHHHHHhCCCCC-CCCcc----------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSH-VTKCSTDMYGLGILIWEVFNGPLQS-TNRKS---------------- 271 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~~~~sDIwSLG~ll~el~tG~~pf-~~~~~---------------- 271 (852)
..... +........+|+.|+|||++.+. .++.++|||||||++|+|++|..|+ .+...
T Consensus 149 ~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~ 224 (292)
T 3o0g_A 149 RAFGI----PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE 224 (292)
T ss_dssp EECCS----CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eecCC----ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCCh
Confidence 75432 22223345678899999998554 4799999999999999999987774 22110
Q ss_pred ------------------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 272 ------------------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 272 ------------------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
......+++.+.+++++||..||.+|||+.++++| +||++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h-----p~f~~~ 289 (292)
T 3o0g_A 225 EQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH-----PYFSDF 289 (292)
T ss_dssp TTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS-----GGGTTC
T ss_pred hhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC-----cccccC
Confidence 00123578899999999999999999999999998 899763
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=352.74 Aligned_cols=245 Identities=18% Similarity=0.259 Sum_probs=210.9
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-------CCchHHHHHHHHHHHhCCCCCcceEee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-------ADTYEPALSYVKKLKTLRHPSILTFLD 124 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-------~~~~~~~~~E~~~Lk~LrHPnIlk~~d 124 (852)
+...|++.+.|| .|++|+||+|+++.+|+.|+||+++. ....+.+.+|+.+++.++||||+++++
T Consensus 22 ~~~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~ 93 (351)
T 3c0i_A 22 FEDVYELCEVIG--------KGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLE 93 (351)
T ss_dssp HHHHEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccceEEeeEEe--------eCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEE
Confidence 344699999999 99999999999999999999999975 124678999999999999999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc--
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE-- 200 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~-- 200 (852)
++++. +.+||||||+. +|.+++.+.......+++..+..++.||+.||.||| +.+++||||||+||+++.++.
T Consensus 94 ~~~~~--~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH-~~~ivHrDlkp~NIl~~~~~~~~ 170 (351)
T 3c0i_A 94 TYSSD--GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH-DNNIIHRDVKPHCVLLASKENSA 170 (351)
T ss_dssp EEEET--TEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECSSSTTC
T ss_pred EEEeC--CEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCChHHeEEecCCCCC
Confidence 99988 89999999998 798888655444556899999999999999999999 899999999999999987665
Q ss_pred -EEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-------
Q psy3914 201 -WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------- 272 (852)
Q Consensus 201 -~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------- 272 (852)
+||+|||++....... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 171 ~vkl~Dfg~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~ 246 (351)
T 3c0i_A 171 PVKLGGFGVAIQLGESG----LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK 246 (351)
T ss_dssp CEEECCCTTCEECCTTS----CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHH
T ss_pred cEEEecCcceeEecCCC----eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHc
Confidence 9999999987553321 1123457899999999998888899999999999999999999999654210
Q ss_pred -------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 -------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 -------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....+++.+.+++++||..||.+||++.++++| +||++
T Consensus 247 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h-----p~~~~ 292 (351)
T 3c0i_A 247 GKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH-----PWLKE 292 (351)
T ss_dssp TCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS-----HHHHT
T ss_pred CCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC-----hhhcC
Confidence 1125789999999999999999999999999997 77754
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=344.61 Aligned_cols=246 Identities=16% Similarity=0.244 Sum_probs=196.4
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
.+|++.+.|| .|++|+||+|.++.+|+.|+||++.. ......+.+|+++|+.++||||++++++++++
T Consensus 5 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~- 75 (317)
T 2pmi_A 5 SQFKQLEKLG--------NGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTE- 75 (317)
T ss_dssp ----------------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCT-
T ss_pred cceeEeeEEC--------CCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEEC-
Confidence 4699999999 99999999999999999999999976 33456788999999999999999999999987
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhh--cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLK--ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~--~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+.+||||||+. +|.+++..... ....+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|||
T Consensus 76 -~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH-~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 153 (317)
T 2pmi_A 76 -NKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH-ENKILHRDLKPQNLLINKRGQLKLGDFG 153 (317)
T ss_dssp -TEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEECCCS
T ss_pred -CeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH-HCCeeeCCCChHHeEEcCCCCEEECcCc
Confidence 89999999999 89988854321 2245899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------- 273 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------- 273 (852)
++..... +........+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.....
T Consensus 154 ~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~ 229 (317)
T 2pmi_A 154 LARAFGI----PVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPN 229 (317)
T ss_dssp SCEETTS----CCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCC
T ss_pred cceecCC----CcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 9875432 1222334568899999999854 568899999999999999999999996432110
Q ss_pred --------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHH
Q psy3914 274 --------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLI 319 (852)
Q Consensus 274 --------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv 319 (852)
....++..+.+++.+||..||.+|||+.++++| +||++...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h-----p~f~~~~~ 302 (317)
T 2pmi_A 230 ESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH-----PWFAEYYH 302 (317)
T ss_dssp TTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS-----GGGGGGCC
T ss_pred hhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC-----hhhhcccc
Confidence 012578899999999999999999999999997 89976543
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=340.42 Aligned_cols=238 Identities=16% Similarity=0.238 Sum_probs=201.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|++|+||+|++ .+|+.|+||++.. ......+.+|+++++.++||||+++++++.+.
T Consensus 3 ~y~~~~~lg--------~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 72 (288)
T 1ob3_A 3 KYHGLEKIG--------EGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK- 72 (288)
T ss_dssp SEEEEEEEE--------EETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS-
T ss_pred cchhhhhcc--------cCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccC-
Confidence 599999999 999999999998 5789999999976 23346788999999999999999999999987
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+.+|+||||+. +|.+++.. ..+.+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|||++
T Consensus 73 -~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (288)
T 1ob3_A 73 -KRLVLVFEHLDQDLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCH-DRRVLHRDLKPQNLLINREGELKIADFGLA 147 (288)
T ss_dssp -SCEEEEEECCSEEHHHHHHT---STTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTSCEEECCTTHH
T ss_pred -CeEEEEEEecCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHEEEcCCCCEEEeECccc
Confidence 89999999999 78888843 2367899999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------- 272 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------- 272 (852)
...... ........+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+....
T Consensus 148 ~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 223 (288)
T 1ob3_A 148 RAFGIP----VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSK 223 (288)
T ss_dssp HHHCC-------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred cccCcc----ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChh
Confidence 754321 122234567889999999854 56889999999999999999999998643211
Q ss_pred ------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 ------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 ------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....+++.+.+++++||..||.+|||+.++++| +||++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h-----p~f~~ 286 (288)
T 1ob3_A 224 NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH-----AYFKE 286 (288)
T ss_dssp TSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS-----GGGGC
T ss_pred hchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC-----cchhh
Confidence 0123578899999999999999999999999998 89875
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-38 Score=343.19 Aligned_cols=239 Identities=19% Similarity=0.270 Sum_probs=202.2
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|++|+||+|+++ +|+.|+||++.. ......+.+|+++++.++||||+++++++.+.
T Consensus 21 ~~y~~~~~lG--------~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 91 (311)
T 3niz_A 21 EKYQKLEKVG--------EGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSE 91 (311)
T ss_dssp CEEEEEEEEE--------ECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS
T ss_pred hhhHhhhhcc--------CCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccC
Confidence 4599999999 9999999999996 589999999976 23346788999999999999999999999987
Q ss_pred CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 130 SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 130 ~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+||||||+. +|.+++.. ....+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|||+
T Consensus 92 --~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 165 (311)
T 3niz_A 92 --RCLTLVFEFMEKDLKKVLDE---NKTGLQDSQIKIYLYQLLRGVAHCH-QHRILHRDLKPQNLLINSDGALKLADFGL 165 (311)
T ss_dssp --SCEEEEEECCSEEHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred --CEEEEEEcCCCCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCchHhEEECCCCCEEEccCcC
Confidence 89999999999 78887743 2356899999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc--------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS-------------- 273 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~-------------- 273 (852)
+..... +........+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.....
T Consensus 166 a~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~ 241 (311)
T 3niz_A 166 ARAFGI----PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNP 241 (311)
T ss_dssp CEETTS----CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCT
T ss_pred ceecCC----CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCCh
Confidence 875432 1222334567889999999854 668999999999999999999999996432211
Q ss_pred ---------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 ---------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ---------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++++||..||.+|||+.++++| +||++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h-----p~f~~ 306 (311)
T 3niz_A 242 REWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH-----PYFKD 306 (311)
T ss_dssp TTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS-----GGGTT
T ss_pred HHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC-----ccccc
Confidence 013467889999999999999999999999998 89975
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-38 Score=349.41 Aligned_cols=239 Identities=16% Similarity=0.198 Sum_probs=209.5
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC--------chHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD--------TYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~--------~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
..|++++.|| .|+||.||+|+++.+|+.|+||++.+.. ..+.+.+|+.+|+.++||||++++++
T Consensus 12 ~~y~~~~~LG--------~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~ 83 (361)
T 2yab_A 12 DFYDIGEELG--------SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDV 83 (361)
T ss_dssp GTEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred hceEEeeEEe--------eCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEE
Confidence 4599999999 9999999999999999999999998721 34788999999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC----
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG---- 199 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g---- 199 (852)
+++. ..+||||||+. +|.+++. ..+.+++..+..++.||+.||.||| +.|++||||||+||+++.++
T Consensus 84 ~~~~--~~~~lv~e~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH-~~givHrDlkp~NIll~~~~~~~~ 156 (361)
T 2yab_A 84 YENR--TDVVLILELVSGGELFDFLA----QKESLSEEEATSFIKQILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIP 156 (361)
T ss_dssp EECS--SEEEEEEECCCSCBHHHHHT----TCSCCBHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEESCTTSSSC
T ss_pred EEeC--CEEEEEEEcCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEEeCCCCCcc
Confidence 9987 89999999996 7998883 2367999999999999999999999 89999999999999998877
Q ss_pred cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc------
Q psy3914 200 EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------ 273 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------ 273 (852)
.+||+|||++..+... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus 157 ~vkl~DFG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~ 231 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDG-----VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231 (361)
T ss_dssp CEEECCCSSCEECCTT-----CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH
T ss_pred CEEEEecCCceEcCCC-----CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 7999999998754331 12234678999999999988889999999999999999999999996543211
Q ss_pred ---------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 274 ---------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 274 ---------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
....+++.+.++|++||..||.+|||+.++++| +||.+.
T Consensus 232 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h-----p~~~~~ 279 (361)
T 2yab_A 232 AVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH-----PWITPV 279 (361)
T ss_dssp TTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS-----TTTSCS
T ss_pred hcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC-----cCcCCC
Confidence 125788999999999999999999999999998 999754
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-38 Score=347.80 Aligned_cols=238 Identities=16% Similarity=0.214 Sum_probs=206.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.+|++.+.|| .|++|+||.|+++.+|+.|+||++.. ......+.+|+.+++.++||||+++++++++
T Consensus 9 ~~Y~i~~~lG--------~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 80 (336)
T 3h4j_B 9 GPYIIRETLG--------EGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT 80 (336)
T ss_dssp TTEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred CCEEEEEEEe--------cCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe
Confidence 4699999999 99999999999999999999999976 3445678999999999999999999999998
Q ss_pred CCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 129 PSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 129 ~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
. +.+|+||||+. +|.+++.. .+.+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|||
T Consensus 81 ~--~~~~lv~E~~~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH-~~givH~Dlkp~NIll~~~~~~kl~DFG 153 (336)
T 3h4j_B 81 P--TDIVMVIEYAGGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCH-RHKIVHRDLKPENLLLDDNLNVKIADFG 153 (336)
T ss_dssp S--SEEEEEECCCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH-HHTCCCCCCSTTTEEECTTCCEEECCSS
T ss_pred C--CEEEEEEECCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCchhhEEEcCCCCEEEEEec
Confidence 8 89999999998 78888743 257999999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCC-CcchhHHhHHHHHHHHHhCCCCCCCCccc-----------cCc
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRKSL-----------SNI 275 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~-~~~sDIwSLG~ll~el~tG~~pf~~~~~l-----------~~~ 275 (852)
++...... .......||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.... ..+
T Consensus 154 ~s~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p 228 (336)
T 3h4j_B 154 LSNIMTDG-----NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP 228 (336)
T ss_dssp CTBTTTTS-----BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCC
T ss_pred cceeccCC-----cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCc
Confidence 98754321 22234578999999999966554 68999999999999999999999653221 123
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
..+++.+.+++++||..||.+|||+.++++| +||+.
T Consensus 229 ~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h-----p~~~~ 264 (336)
T 3h4j_B 229 DFLSPGAQSLIRRMIVADPMQRITIQEIRRD-----PWFNV 264 (336)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC-----HHHHT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHHhC-----hhhcc
Confidence 5678999999999999999999999999997 77754
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=340.27 Aligned_cols=241 Identities=16% Similarity=0.246 Sum_probs=212.2
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.+|++.+.|| .|++|.||.|+++.+|+.|+||++.+ ....+.+.+|+.+++.++||||+++++++++
T Consensus 6 ~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~ 77 (318)
T 1fot_A 6 QDFQILRTLG--------TGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD 77 (318)
T ss_dssp GGEEEEEEEE--------ECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC
T ss_pred HHcEEEEEEe--------eCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe
Confidence 3599999999 99999999999999999999999986 3456788899999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. ..+|+||||+. +|.+++.+ ...+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+||
T Consensus 78 ~--~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~g~~kL~Df 150 (318)
T 1fot_A 78 A--QQIFMIMDYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLH-SKDIIYRDLKPENILLDKNGHIKITDF 150 (318)
T ss_dssp S--SEEEEEECCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHH-TTTEECCCCCGGGEEECTTSCEEECCC
T ss_pred C--CEEEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCChheEEEcCCCCEEEeec
Confidence 7 89999999997 79998843 357899999999999999999999 999999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNI 275 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~ 275 (852)
|++..... ......||+.|+|||++.+..++.++|+|||||++|||++|..||.+... ...+
T Consensus 151 g~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p 223 (318)
T 1fot_A 151 GFAKYVPD-------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP 223 (318)
T ss_dssp SSCEECSS-------CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC
T ss_pred CcceecCC-------ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 99875432 12245789999999999888899999999999999999999999965432 2234
Q ss_pred CCCChhHHHHHHHhccCCCCCCC-----CHHHHHHhhcCCCCCCcchHHHH
Q psy3914 276 DNIPENLKRVYLELISERPNQRP-----NPADFIMRNRKPGGYFKNDLIDA 321 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n~lv~~ 321 (852)
..+++.+.+++++||..||.+|| ++.++++| +||++...+.
T Consensus 224 ~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h-----p~f~~~~~~~ 269 (318)
T 1fot_A 224 PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH-----PWFKEVVWEK 269 (318)
T ss_dssp TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS-----GGGSSCCHHH
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC-----ccccCCCHHH
Confidence 67889999999999999999999 89999997 8998754443
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=344.58 Aligned_cols=243 Identities=15% Similarity=0.217 Sum_probs=208.2
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhC-CCCCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTL-RHPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~L-rHPnIlk~~d~ 125 (852)
...+|++.+.|| .|++|.||.|+++.+|+.|+||++.+. .....+.+|..+++.+ +||||++++++
T Consensus 7 ~~~~y~~~~~lG--------~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~ 78 (345)
T 3a8x_A 7 GLQDFDLLRVIG--------RGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC 78 (345)
T ss_dssp CGGGEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred chhheEEEEEEE--------ecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEE
Confidence 345699999999 999999999999999999999999862 2345678899999988 89999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+++. ..+||||||+. +|..++.+. +.+++..++.++.||+.||.||| +.+|+||||||+||+++.+|.+||
T Consensus 79 ~~~~--~~~~lv~e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~g~~kL 151 (345)
T 3a8x_A 79 FQTE--SRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLH-ERGIIYRDLKLDNVLLDSEGHIKL 151 (345)
T ss_dssp EECS--SEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTSCEEE
T ss_pred EEeC--CEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH-HCCceecCCCHHHEEECCCCCEEE
Confidence 9988 89999999997 798888432 57899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-------------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK------------- 270 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~------------- 270 (852)
+|||+++.... .........||+.|+|||++.+..++.++|+|||||++|||++|..||....
T Consensus 152 ~DFG~a~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 227 (345)
T 3a8x_A 152 TDYGMCKEGLR----PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 227 (345)
T ss_dssp CCGGGCBCSCC----TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHH
T ss_pred EeccccccccC----CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHH
Confidence 99999874221 1122335678999999999988889999999999999999999999995311
Q ss_pred -------cccCcCCCChhHHHHHHHhccCCCCCCCCH------HHHHHhhcCCCCCCcchH
Q psy3914 271 -------SLSNIDNIPENLKRVYLELISERPNQRPNP------ADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 271 -------~l~~~~~ip~~L~~li~~lL~~nP~~Rps~------~elL~~l~~~~~fF~n~l 318 (852)
....+..++..+.+++++||..||.+||++ .++++| +||++.-
T Consensus 228 ~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h-----p~f~~~~ 283 (345)
T 3a8x_A 228 FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH-----PFFRNVD 283 (345)
T ss_dssp HHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS-----GGGTTCC
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC-----CccCCCC
Confidence 112245688999999999999999999995 788887 8997753
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-38 Score=348.54 Aligned_cols=243 Identities=15% Similarity=0.231 Sum_probs=206.9
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhC-CCCCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTL-RHPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~ 125 (852)
...+|++.+.|| .|++|+||+|+++.+|+.||||++.+ ......+.+|..+|+.+ +||||++++++
T Consensus 21 ~~~~y~~~~~lG--------~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~ 92 (353)
T 3txo_A 21 GIDNFEFIRVLG--------KGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCC 92 (353)
T ss_dssp --CCEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred chhheEEEEEEe--------eCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEE
Confidence 345699999999 99999999999999999999999986 34566788999999988 69999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+++. ..+||||||+. +|..++.+. ..+++..++.++.||+.||.||| +.+|+||||||+||+++.+|.+||
T Consensus 93 ~~~~--~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH-~~givHrDlkp~NILl~~~g~ikL 165 (353)
T 3txo_A 93 FQTP--DRLFFVMEFVNGGDLMFHIQKS----RRFDEARARFYAAEIISALMFLH-DKGIIYRDLKLDNVLLDHEGHCKL 165 (353)
T ss_dssp EECS--SEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTSCEEE
T ss_pred EEeC--CEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCHHHEEECCCCCEEE
Confidence 9988 89999999998 798888432 57999999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------c
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------L 272 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l 272 (852)
+|||++..... ........+||+.|+|||++.+..++.++|+|||||++|||++|..||.+... .
T Consensus 166 ~DFG~a~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~ 241 (353)
T 3txo_A 166 ADFGMCKEGIC----NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV 241 (353)
T ss_dssp CCCTTCBCSCC-------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred ccccceeeccc----CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC
Confidence 99999873221 11223356799999999999777789999999999999999999999965432 2
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCH------HHHHHhhcCCCCCCcchH
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNP------ADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~------~elL~~l~~~~~fF~n~l 318 (852)
..+..+++.+.+++++||..||.+||++ .++++| +||++.-
T Consensus 242 ~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h-----p~f~~~~ 288 (353)
T 3txo_A 242 VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH-----PFFKEID 288 (353)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS-----GGGTTCC
T ss_pred CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC-----CcccCCC
Confidence 2345688999999999999999999998 889987 8998753
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=344.78 Aligned_cols=243 Identities=17% Similarity=0.211 Sum_probs=213.3
Q ss_pred CCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEe
Q psy3914 49 DASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFL 123 (852)
Q Consensus 49 ~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~ 123 (852)
......+|++.+.|| .|++|.||.|+++.+|+.|+||++.+ ......+.+|+++|+.++||||++++
T Consensus 36 ~~~~~~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~ 107 (350)
T 1rdq_E 36 NTAQLDQFDRIKTLG--------TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107 (350)
T ss_dssp CCCCGGGEEEEEEEE--------ECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred cCCCHHHCEEEEEee--------cCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 334445799999999 99999999999999999999999976 35567889999999999999999999
Q ss_pred eeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcE
Q psy3914 124 DSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEW 201 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~ 201 (852)
+++.+. ..+||||||+. +|.+++.+. +.+++..+..++.||+.||.||| +.||+||||||+||+++.+|.+
T Consensus 108 ~~~~~~--~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~g~~ 180 (350)
T 1rdq_E 108 FSFKDN--SNLYMVMEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGYI 180 (350)
T ss_dssp EEEECS--SEEEEEEECCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCE
T ss_pred EEEEcC--CEEEEEEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH-HCCcccccCccceEEECCCCCE
Confidence 999987 89999999997 799988532 57899999999999999999999 8999999999999999999999
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc----------
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS---------- 271 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~---------- 271 (852)
||+|||++...... .....||+.|+|||++.+..++.++|+|||||++|+|++|..||.+...
T Consensus 181 kL~DFg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~ 253 (350)
T 1rdq_E 181 QVTDFGFAKRVKGR-------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253 (350)
T ss_dssp EECCCTTCEECSSC-------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred EEcccccceeccCC-------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC
Confidence 99999998754321 1245789999999999888899999999999999999999999965432
Q ss_pred -ccCcCCCChhHHHHHHHhccCCCCCCCC-----HHHHHHhhcCCCCCCcchH
Q psy3914 272 -LSNIDNIPENLKRVYLELISERPNQRPN-----PADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 272 -l~~~~~ip~~L~~li~~lL~~nP~~Rps-----~~elL~~l~~~~~fF~n~l 318 (852)
...+..+++.+.++|++||..||.+||+ +.++++| +||.+.-
T Consensus 254 ~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h-----~~f~~~~ 301 (350)
T 1rdq_E 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH-----KWFATTD 301 (350)
T ss_dssp CCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS-----GGGTTCC
T ss_pred CCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC-----cCcCCCC
Confidence 2234678999999999999999999998 9999997 8997643
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-38 Score=353.50 Aligned_cols=244 Identities=16% Similarity=0.239 Sum_probs=197.0
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCC-CCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLR-HPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~ 128 (852)
.+|++.+.|| .|++|.||.|.++.+|+.||||++.. ......+.+|+.+|+.++ ||||+++++++..
T Consensus 9 ~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~ 80 (388)
T 3oz6_A 9 RKYELVKKLG--------KGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA 80 (388)
T ss_dssp TTEEEEEC---------------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred CceEEEEEee--------eCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec
Confidence 3599999999 99999999999999999999999865 223456779999999998 9999999999986
Q ss_pred CCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 129 PSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 129 ~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+....+||||||+. +|..++.. ..+++..+..+++||+.||.||| +.||+||||||+||+++.+|.+||+|||
T Consensus 81 ~~~~~~~lv~e~~~~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH-~~~ivHrDlkp~NIll~~~~~~kl~DFG 154 (388)
T 3oz6_A 81 DNDRDVYLVFDYMETDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLH-SGGLLHRDMKPSNILLNAECHVKVADFG 154 (388)
T ss_dssp TTSSCEEEEEECCSEEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCCCEEEEEecccCcCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH-hCCEEeCCCCHHHeEEcCCCCEEecCCc
Confidence 54458999999999 78888843 47899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccC-----------------CCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCC
Q psy3914 208 YMEKISEASC-----------------IPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNR 269 (852)
Q Consensus 208 ~a~~~~~~~~-----------------~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~ 269 (852)
+++.+..... ..........||+.|+|||++.+ ..++.++|||||||++|||++|..||.+.
T Consensus 155 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 155 LSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp TCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9875432110 01112234678999999999854 67899999999999999999999999664
Q ss_pred ccccC----------------------------------------------------------cCCCChhHHHHHHHhcc
Q psy3914 270 KSLSN----------------------------------------------------------IDNIPENLKRVYLELIS 291 (852)
Q Consensus 270 ~~l~~----------------------------------------------------------~~~ip~~L~~li~~lL~ 291 (852)
+...+ ...+++.+.+++++||.
T Consensus 235 ~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~ 314 (388)
T 3oz6_A 235 STMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQ 314 (388)
T ss_dssp SHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhc
Confidence 32111 11678899999999999
Q ss_pred CCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 292 ERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 292 ~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.||.+|||+.++++| +||+.
T Consensus 315 ~dP~~R~t~~e~l~H-----p~~~~ 334 (388)
T 3oz6_A 315 FNPNKRISANDALKH-----PFVSI 334 (388)
T ss_dssp SSGGGSCCHHHHTTS-----TTTTT
T ss_pred cCcccCCCHHHHhCC-----HHHHH
Confidence 999999999999998 88753
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-38 Score=369.58 Aligned_cols=307 Identities=13% Similarity=0.173 Sum_probs=241.1
Q ss_pred cccccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCC
Q psy3914 43 WAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHP 117 (852)
Q Consensus 43 ~~~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHP 117 (852)
|..+.+.+.....|++.+.|| .|+||.||.|+++.+|+.||||++.+ ......+.+|+++|+.++||
T Consensus 173 ~~~l~~~~~~~~~f~~~~~LG--------~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp 244 (576)
T 2acx_A 173 WKWLERQPVTKNTFRQYRVLG--------KGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR 244 (576)
T ss_dssp HHHHHTSCCCGGGEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCT
T ss_pred hhhhhhcCccccceEEEEEEe--------eCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 445566677777899999999 99999999999999999999999976 44566789999999999999
Q ss_pred CcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE
Q psy3914 118 SILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI 195 (852)
Q Consensus 118 nIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV 195 (852)
||+++++++++. ..+||||||+. +|..++... ....+++..+..++.||+.||.||| +.||+||||||+||++
T Consensus 245 ~Iv~l~~~~~~~--~~l~lVmEy~~gg~L~~~l~~~--~~~~l~e~~~~~i~~qIl~aL~yLH-~~gIvHrDLKPeNILl 319 (576)
T 2acx_A 245 FVVSLAYAYETK--DALCLVLTLMNGGDLKFHIYHM--GQAGFPEARAVFYAAEICCGLEDLH-RERIVYRDLKPENILL 319 (576)
T ss_dssp TBCCEEEEEECS--SEEEEEECCCCSCBHHHHHHSS--SSCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEE
T ss_pred CEeeEEEEEeeC--CEEEEEEEcCCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH-HCCEeccCCchheEEE
Confidence 999999999987 89999999997 799888432 2245899999999999999999999 8999999999999999
Q ss_pred ccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc----
Q psy3914 196 NSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS---- 271 (852)
Q Consensus 196 ~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~---- 271 (852)
+.+|.+||+|||++...... .......||+.|+|||++.+..++.++|+|||||++|||++|..||.+...
T Consensus 320 d~~g~vKL~DFGla~~~~~~-----~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~ 394 (576)
T 2acx_A 320 DDHGHIRISDLGLAVHVPEG-----QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR 394 (576)
T ss_dssp CTTSCEEECCCTTCEECCTT-----CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH
T ss_pred eCCCCeEEEecccceecccC-----ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH
Confidence 99999999999998754321 112345789999999999888899999999999999999999999965422
Q ss_pred -----------ccCcCCCChhHHHHHHHhccCCCCCCC-----CHHHHHHhhcCCCCCCcchHHHHH-------------
Q psy3914 272 -----------LSNIDNIPENLKRVYLELISERPNQRP-----NPADFIMRNRKPGGYFKNDLIDAL------------- 322 (852)
Q Consensus 272 -----------l~~~~~ip~~L~~li~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n~lv~~l------------- 322 (852)
......+++.+.++|++||..||.+|| ++.++++| +||++.-.+.+
T Consensus 395 ~~i~~~i~~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H-----pfF~~i~w~~l~~~~~~pp~~p~~ 469 (576)
T 2acx_A 395 EEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH-----PLFKKLNFKRLGAGMLEPPFKPDP 469 (576)
T ss_dssp HHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS-----GGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred HHHHHHhhcccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC-----hhhccCCHHHHhcCCCCCCCCCCc
Confidence 122356889999999999999999999 78999998 88876332222
Q ss_pred ------------HHHHHhhccCHHHHhHHHHhhhhhhccCC--cccccccchhhhHhhhhcCCC
Q psy3914 323 ------------LFLEEIQMKDKIDKNKFFNGLASAIDKFP--KLISCHKVLPQLINAFEYGEA 372 (852)
Q Consensus 323 ------------~~Leel~~k~~~eK~~Ff~~L~~~l~~fP--~~~~~~kiLP~Ll~~~e~~~~ 372 (852)
.|..............||+++......+| +.++...+.+.|.....+|..
T Consensus 470 ~~~~~~~~~d~~~f~~~~~~~~~~~~~~~f~~f~~~~~~~~~~~e~~~~~~~~~l~~~~~~g~~ 533 (576)
T 2acx_A 470 QAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVFGLDGSV 533 (576)
T ss_dssp CCCCC-----------------CHHHHHHHHHHCCEECHHHHHHHHHHTTHHHHHHCBSSSCC-
T ss_pred cccccCCcccHhhccccCCCCCCccHHHHHhhhccCCCCcccchhhhhcchhhhhcccCCCCCC
Confidence 12222223334555677777655433344 455566666666655555543
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=339.35 Aligned_cols=240 Identities=17% Similarity=0.209 Sum_probs=209.3
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC--------chHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD--------TYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~--------~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
..|++++.|| .|++|.||+|+++.+|..|+||++.... ..+.+.+|+.+|+.++||||++++++
T Consensus 11 ~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~ 82 (326)
T 2y0a_A 11 DYYDTGEELG--------SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEV 82 (326)
T ss_dssp HHEEEEEEEE--------CCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cceEeceEEe--------eCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 3599999999 9999999999999999999999998721 35779999999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC----
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG---- 199 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g---- 199 (852)
+++. ..+|+||||+. +|.+++. ....+++..+..++.||+.||.||| +.+++||||||+||+++.++
T Consensus 83 ~~~~--~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~al~~lH-~~~ivH~Dlkp~NIll~~~~~~~~ 155 (326)
T 2y0a_A 83 YENK--TDVILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKP 155 (326)
T ss_dssp EECS--SEEEEEEECCCSCBHHHHHT----TSSCCBHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEESCSSSSSC
T ss_pred EEeC--CEEEEEEEcCCCCCHHHHHH----hcCCcCHHHHHHHHHHHHHHHHHHH-HCCeEcCCCCHHHEEEecCCCCCC
Confidence 9987 89999999997 7998883 2367999999999999999999999 89999999999999999887
Q ss_pred cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc------
Q psy3914 200 EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------ 273 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------ 273 (852)
.+||+|||++...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus 156 ~~kl~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~ 230 (326)
T 2y0a_A 156 RIKIIDFGLAHKIDFG-----NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230 (326)
T ss_dssp CEEECCCTTCEECCTT-----SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH
T ss_pred CEEEEECCCCeECCCC-----CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH
Confidence 7999999998754321 11234568999999999988889999999999999999999999996543211
Q ss_pred ---------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchH
Q psy3914 274 ---------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 274 ---------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~l 318 (852)
....++..+.+++++||..||.+|||+.++++| +||....
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h-----p~~~~~~ 279 (326)
T 2y0a_A 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH-----PWIKPKD 279 (326)
T ss_dssp HTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS-----TTTSCCS
T ss_pred hcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC-----CCccCCc
Confidence 125788999999999999999999999999998 9997643
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=349.41 Aligned_cols=248 Identities=15% Similarity=0.189 Sum_probs=207.2
Q ss_pred CCCCeeEeccccCCCCCCcccC--CceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKH--TFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~G--s~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
...+|++++.|| .| ++++||+|+++.+|+.|+||++... .....+.+|+.+++.++||||++++++
T Consensus 23 ~~~~y~~~~~lG--------~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 94 (389)
T 3gni_B 23 EGGCYELLTVIG--------KGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRAT 94 (389)
T ss_dssp CGGGEEEEEEEE--------EETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred CCCcEEEEeccc--------CCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEE
Confidence 445699999999 88 9999999999999999999999872 234678889999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+.+. +.+||||||+. +|.+++... ....+++..+..++.||+.||.||| +.+|+||||||+||+++.+|.+||
T Consensus 95 ~~~~--~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivHrDlkp~NIll~~~~~~kl 169 (389)
T 3gni_B 95 FIAD--NELWVVTSFMAYGSAKDLICTH--FMDGMNELAIAYILQGVLKALDYIH-HMGYVHRSVKASHILISVDGKVYL 169 (389)
T ss_dssp EEET--TEEEEEEECCTTCBHHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTCCEEE
T ss_pred EEEC--CEEEEEEEccCCCCHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEEcCCCCEEE
Confidence 9988 89999999998 799988532 2356899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccC---CCCcccccccCCCcccCCccccC--CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-----
Q psy3914 204 GGLEYMEKISEASC---IPMKRYSRYEDQSTYQIPENSLS--HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS----- 273 (852)
Q Consensus 204 ~DFg~a~~~~~~~~---~~~~~~~~~~gt~~Y~APE~~~~--~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~----- 273 (852)
+|||++........ ..........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.....
T Consensus 170 ~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~ 249 (389)
T 3gni_B 170 SGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK 249 (389)
T ss_dssp CCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC
T ss_pred cccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 99999864432111 11112223478889999999865 678999999999999999999999996532211
Q ss_pred ----------------------------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHH
Q psy3914 274 ----------------------------------------------------NIDNIPENLKRVYLELISERPNQRPNPA 301 (852)
Q Consensus 274 ----------------------------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~ 301 (852)
....+++.+.+++++||..||.+|||+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ 329 (389)
T 3gni_B 250 LNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSAS 329 (389)
T ss_dssp --------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred hcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHH
Confidence 1234678899999999999999999999
Q ss_pred HHHHhhcCCCCCCcch
Q psy3914 302 DFIMRNRKPGGYFKND 317 (852)
Q Consensus 302 elL~~l~~~~~fF~n~ 317 (852)
++++| +||+..
T Consensus 330 ell~h-----p~f~~~ 340 (389)
T 3gni_B 330 TLLNH-----SFFKQI 340 (389)
T ss_dssp HHTTS-----GGGGGC
T ss_pred HHhcC-----HHHHHH
Confidence 99997 888653
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=348.91 Aligned_cols=244 Identities=15% Similarity=0.223 Sum_probs=208.5
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhC-CCCCcceEeeeE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTL-RHPSILTFLDSV 126 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~ 126 (852)
..+|++.+.|| .|++|+||+|+++.+++.||||++.+ ......+.+|..+|+++ +||||+++++++
T Consensus 51 ~~~y~~~~~LG--------~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~ 122 (396)
T 4dc2_A 51 LQDFDLLRVIG--------RGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 122 (396)
T ss_dssp GGGEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhHcEEEEEEe--------eCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEE
Confidence 34699999999 99999999999999999999999986 23344678899999887 899999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
++. ..+||||||+. +|..++.+ .+.+++..++.++.||+.||.||| +.+|+||||||+||+++.+|.+||+
T Consensus 123 ~~~--~~~~lV~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH-~~givHrDLKp~NILl~~~g~ikL~ 195 (396)
T 4dc2_A 123 QTE--SRLFFVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLH-ERGIIYRDLKLDNVLLDSEGHIKLT 195 (396)
T ss_dssp ECS--SEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred EEC--CEEEEEEEcCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCEEeccCCHHHEEECCCCCEEEe
Confidence 988 89999999998 79888843 257999999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc--------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK-------------- 270 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~-------------- 270 (852)
|||+++.... ........+||+.|+|||++.+..++.++|+|||||++|||++|..||.+..
T Consensus 196 DFGla~~~~~----~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~ 271 (396)
T 4dc2_A 196 DYGMCKEGLR----PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 271 (396)
T ss_dssp CCTTCBCCCC----TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHH
T ss_pred ecceeeeccc----CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHH
Confidence 9999873211 1222345679999999999988889999999999999999999999995321
Q ss_pred ------cccCcCCCChhHHHHHHHhccCCCCCCCCH------HHHHHhhcCCCCCCcchHHH
Q psy3914 271 ------SLSNIDNIPENLKRVYLELISERPNQRPNP------ADFIMRNRKPGGYFKNDLID 320 (852)
Q Consensus 271 ------~l~~~~~ip~~L~~li~~lL~~nP~~Rps~------~elL~~l~~~~~fF~n~lv~ 320 (852)
....+..+++.+.++|++||..||.+||++ .++++| +||++.-.+
T Consensus 272 ~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H-----pff~~i~w~ 328 (396)
T 4dc2_A 272 QVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH-----PFFRNVDWD 328 (396)
T ss_dssp HHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS-----TTTTTCCHH
T ss_pred HHHhccccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC-----ccccCCCHH
Confidence 112346788999999999999999999985 789987 999875433
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-38 Score=343.88 Aligned_cols=243 Identities=13% Similarity=0.192 Sum_probs=205.5
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
..+|++.+.|| .|++|+||+|+++.+++.|+||++... ...+.+.+|+.+++.++||||+++++++.+.
T Consensus 6 ~~~y~i~~~lG--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 77 (323)
T 3tki_A 6 VEDWDLVQTLG--------EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 77 (323)
T ss_dssp TTCEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhceeeeEEe--------cCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 45699999999 999999999999999999999999762 2345688999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+..|+||||+. +|.+++. ....+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|||
T Consensus 78 --~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH-~~givH~Dlkp~NIll~~~~~~kl~Dfg 150 (323)
T 3tki_A 78 --NIQYLFLEYCSGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLH-GIGITHRDIKPENLLLDERDNLKISDFG 150 (323)
T ss_dssp --SEEEEEEECCTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred --CeEEEEEEcCCCCcHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHH-HCCccccccchHHEEEeCCCCEEEEEee
Confidence 89999999997 6877763 3356899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCC-CCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHV-TKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------------- 272 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------------- 272 (852)
++..+..... ........||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+....
T Consensus 151 ~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~ 228 (323)
T 3tki_A 151 LATVFRYNNR--ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228 (323)
T ss_dssp TCEECEETTE--ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTS
T ss_pred ccceeccCCc--ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccC
Confidence 9875432211 12223467899999999995544 477899999999999999999999643321
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....+++.+.+++++||..||.+|||+.++++| +||++.
T Consensus 229 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h-----~~~~~~ 268 (323)
T 3tki_A 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKKD-----RWYNKP 268 (323)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC-----TTTTCC
T ss_pred CccccCCHHHHHHHHHHccCChhhCcCHHHHhhC-----hhhccc
Confidence 1235688999999999999999999999999997 898754
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=344.23 Aligned_cols=244 Identities=16% Similarity=0.220 Sum_probs=211.0
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhC-CCCCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTL-RHPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~ 125 (852)
...+|++.+.|| .|++|+||+|+++.+|+.||||++.+ ......+.+|..+|+.+ +||||++++++
T Consensus 15 ~~~~y~~~~~lG--------~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~ 86 (345)
T 1xjd_A 15 KIEDFILHKMLG--------KGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCT 86 (345)
T ss_dssp -CTTEEEEEEEE--------ECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred ChHHeEEEEEEe--------eCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEE
Confidence 445699999999 99999999999999999999999986 45567788999999877 89999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+++. ..+||||||+. +|..++.+. +.+++..+..++.||+.||.||| +.||+||||||+||+++.+|.+||
T Consensus 87 ~~~~--~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~g~vkL 159 (345)
T 1xjd_A 87 FQTK--ENLFFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILGLQFLH-SKGIVYRDLKLDNILLDKDGHIKI 159 (345)
T ss_dssp EECS--SEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTSCEEE
T ss_pred EEeC--CEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH-HCCeEeCCCChhhEEECCCCCEEE
Confidence 9988 89999999997 799988532 57899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------c
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------L 272 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l 272 (852)
+|||++...... ........||+.|+|||++.+..++.++|+|||||++|||++|..||.+... .
T Consensus 160 ~DFG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~ 235 (345)
T 1xjd_A 160 ADFGMCKENMLG----DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP 235 (345)
T ss_dssp CCCTTCBCCCCT----TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred eEChhhhhcccC----CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCC
Confidence 999998743211 1123356789999999999888899999999999999999999999965432 2
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHH-HHHHhhcCCCCCCcchHH
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPA-DFIMRNRKPGGYFKNDLI 319 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~-elL~~l~~~~~fF~n~lv 319 (852)
.....+++.+.+++++||..||.+||++. ++++| +||++.-.
T Consensus 236 ~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h-----p~f~~~~w 278 (345)
T 1xjd_A 236 FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH-----PLFREINW 278 (345)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS-----GGGTTCCH
T ss_pred CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC-----ccccCCCH
Confidence 23456889999999999999999999998 88887 89976543
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=357.32 Aligned_cols=247 Identities=13% Similarity=0.140 Sum_probs=191.5
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
..+|++++.|| .|+||+||+|+++.+|+.||||++... .....+.+|+++|+.|+||||+++++++..
T Consensus 52 ~~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 123 (458)
T 3rp9_A 52 PDRYEIRHLIG--------TGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIP 123 (458)
T ss_dssp CTTEEECCC---------------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCC
T ss_pred CCCeEEeeEee--------ecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEec
Confidence 35699999999 999999999999999999999999761 234568899999999999999999999854
Q ss_pred C---CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 129 P---SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 129 ~---~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
. ....+||||||+. +|..++. ....+++..++.+++||+.||.||| +.+|+||||||+||||+.+|.+||+
T Consensus 124 ~~~~~~~~~~lv~e~~~~~L~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH-~~~iiHrDlKp~NILl~~~~~~kl~ 198 (458)
T 3rp9_A 124 KDVEKFDELYVVLEIADSDFKKLFR----TPVYLTELHIKTLLYNLLVGVKYVH-SAGILHRDLKPANCLVNQDCSVKVC 198 (458)
T ss_dssp SCTTTCCCEEEEECCCSEEHHHHHH----SSCCCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTCCEEEC
T ss_pred CCcccCceEEEEEeccccchhhhcc----cCCCCCHHHHHHHHHHHHHHHHHHH-hCCcCCCCCChhhEEECCCCCEeec
Confidence 3 1257999999998 7888883 3367999999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCC-----------------------CcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHH
Q psy3914 205 GLEYMEKISEASCIP-----------------------MKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVF 260 (852)
Q Consensus 205 DFg~a~~~~~~~~~~-----------------------~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~ 260 (852)
|||+++......... .......+||+.|+|||++ ....++.++|||||||++|||+
T Consensus 199 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ell 278 (458)
T 3rp9_A 199 DFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278 (458)
T ss_dssp CCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred ccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHH
Confidence 999998553211100 0123345789999999986 6677999999999999999999
Q ss_pred h-----------CCCCCCCCccc---------------------------------------------------------
Q psy3914 261 N-----------GPLQSTNRKSL--------------------------------------------------------- 272 (852)
Q Consensus 261 t-----------G~~pf~~~~~l--------------------------------------------------------- 272 (852)
+ |.++|.+....
T Consensus 279 tg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~ 358 (458)
T 3rp9_A 279 NMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKRE 358 (458)
T ss_dssp TTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCC
T ss_pred HhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCC
Confidence 8 56666443210
Q ss_pred -----cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 -----SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 -----~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....+++.+.++|++||..||.+|||+.++|+| +||++.
T Consensus 359 ~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H-----p~f~~~ 403 (458)
T 3rp9_A 359 GTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAH-----PFFKEV 403 (458)
T ss_dssp CCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS-----GGGTTT
T ss_pred CCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcC-----Hhhhhc
Confidence 0124568899999999999999999999999998 898763
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=335.28 Aligned_cols=240 Identities=13% Similarity=0.254 Sum_probs=199.3
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC----------------------------chHHH
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD----------------------------TYEPA 104 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~----------------------------~~~~~ 104 (852)
..+|++.+.|| .|++|.||+|+++.+|+.|+||++.... ..+.+
T Consensus 12 ~~~y~~~~~lG--------~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (298)
T 2zv2_A 12 LNQYTLKDEIG--------KGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQV 83 (298)
T ss_dssp ETTEEEEEEEE--------C--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHH
T ss_pred ecceEEEeEEe--------ecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHH
Confidence 34699999999 9999999999999999999999997621 12468
Q ss_pred HHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q psy3914 105 LSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDAD 182 (852)
Q Consensus 105 ~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ 182 (852)
.+|+++|+.++||||+++++++.+.....+|+||||+. +|.+++ ....+++..+..++.||+.||.||| +.+
T Consensus 84 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ 157 (298)
T 2zv2_A 84 YQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-----TLKPLSEDQARFYFQDLIKGIEYLH-YQK 157 (298)
T ss_dssp HHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-----CSSCCCHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred HHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHH-HCC
Confidence 89999999999999999999998743478999999997 565543 2357899999999999999999999 899
Q ss_pred ceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCC---CCcchhHHhHHHHHHHH
Q psy3914 183 LRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHV---TKCSTDMYGLGILIWEV 259 (852)
Q Consensus 183 ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~---~~~~sDIwSLG~ll~el 259 (852)
++||||||+||+++.+|.+||+|||++...... ........||+.|+|||++.+.. ++.++|||||||++|+|
T Consensus 158 ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l 233 (298)
T 2zv2_A 158 IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS----DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCF 233 (298)
T ss_dssp EECCCCCGGGEEECTTSCEEECCCTTCEECSSS----SCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHH
T ss_pred eeccCCCHHHEEECCCCCEEEecCCCccccccc----cccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHH
Confidence 999999999999999999999999998754321 11223457899999999985443 36789999999999999
Q ss_pred HhCCCCCCCCcc-------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 260 FNGPLQSTNRKS-------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 260 ~tG~~pf~~~~~-------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
++|..||.+... ......+++.+.+++.+||..||.+||++.++++| +||.
T Consensus 234 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h-----p~~~ 297 (298)
T 2zv2_A 234 VFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH-----PWVT 297 (298)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC-----HHHH
T ss_pred HHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC-----cccc
Confidence 999999965321 11235789999999999999999999999999997 6763
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-37 Score=328.18 Aligned_cols=241 Identities=16% Similarity=0.219 Sum_probs=188.4
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.+|++++.|| .|+++.||+|++..+|+.|+||++.. ....+.+.+|+++++.++||||+++++++.+
T Consensus 11 ~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 82 (278)
T 3cok_A 11 EDFKVGNLLG--------KGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED 82 (278)
T ss_dssp GGEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC
T ss_pred ccceeeeeec--------CCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc
Confidence 3599999999 99999999999999999999999976 3445788999999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. +.+|+||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+||
T Consensus 83 ~--~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p~Nili~~~~~~kl~df 156 (278)
T 3cok_A 83 S--NYVYLVLEMCHNGEMNRYLKN---RVKPFSENEARHFMHQIITGMLYLH-SHGILHRDLTLSNLLLTRNMNIKIADF 156 (278)
T ss_dssp S--SEEEEEEECCTTEEHHHHHHT---CSSCCCHHHHHHHHHHHHHHHHHHH-HTTEECSSCCGGGEEECTTCCEEECCC
T ss_pred C--CeEEEEEecCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHEEEcCCCCEEEEee
Confidence 7 89999999997 79888843 2357899999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----------cCc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-----------SNI 275 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-----------~~~ 275 (852)
|++....... .......+|+.|+|||++.+..++.++|+|||||++|+|++|..||...... ...
T Consensus 157 g~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 232 (278)
T 3cok_A 157 GLATQLKMPH----EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP 232 (278)
T ss_dssp TTCEECC--------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCC
T ss_pred cceeeccCCC----CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCc
Confidence 9987543211 1122356788999999998778889999999999999999999999643221 223
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
..++..+.+++.+||..||.+||++.++++| +||...
T Consensus 233 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h-----~~~~~~ 269 (278)
T 3cok_A 233 SFLSIEAKDLIHQLLRRNPADRLSLSSVLDH-----PFMSRN 269 (278)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS-----TTTC--
T ss_pred cccCHHHHHHHHHHcccCHhhCCCHHHHhcC-----ccccCC
Confidence 5678899999999999999999999999997 899754
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-37 Score=341.70 Aligned_cols=244 Identities=16% Similarity=0.229 Sum_probs=211.1
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhC-CCCCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTL-RHPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~ 125 (852)
...+|++.+.|| .|++|+||+|+++.+|+.||||++.+ ....+.+.+|.++|..+ +||+|++++++
T Consensus 18 ~~~~y~~~~~lG--------~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~ 89 (353)
T 2i0e_A 18 KLTDFNFLMVLG--------KGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC 89 (353)
T ss_dssp -CTTEEEEEEEE--------EETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEE
T ss_pred chHHcEEEEEEe--------eCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEE
Confidence 445699999999 99999999999999999999999986 35567788999999988 79999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+++. ..+||||||+. +|..++.+. +.+++..++.++.||+.||.||| +.||+||||||+||+++.+|.+||
T Consensus 90 ~~~~--~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH-~~givHrDlkp~NIll~~~g~vkL 162 (353)
T 2i0e_A 90 FQTM--DRLYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQ-SKGIIYRDLKLDNVMLDSEGHIKI 162 (353)
T ss_dssp EECS--SEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTSCEEE
T ss_pred EEcC--CEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH-HCCEEeccCCHHHEEEcCCCcEEE
Confidence 9988 89999999997 799988532 57899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------c
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------L 272 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l 272 (852)
+|||++...... ........||+.|+|||++.+..++.++|+|||||++|||++|..||.+... .
T Consensus 163 ~DFG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~ 238 (353)
T 2i0e_A 163 ADFGMCKENIWD----GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV 238 (353)
T ss_dssp CCCTTCBCCCCT----TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred EeCCcccccccC----CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Confidence 999998742211 1123356789999999999888899999999999999999999999965432 2
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCC-----HHHHHHhhcCCCCCCcchHH
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPN-----PADFIMRNRKPGGYFKNDLI 319 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps-----~~elL~~l~~~~~fF~n~lv 319 (852)
..+..+++.+.++|++||..||.+||+ +.++++| +||++.-.
T Consensus 239 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h-----~~f~~~~w 285 (353)
T 2i0e_A 239 AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH-----AFFRYIDW 285 (353)
T ss_dssp CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS-----GGGTTCCH
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC-----ccccCCCH
Confidence 334678999999999999999999995 5889887 89986433
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-37 Score=344.61 Aligned_cols=243 Identities=16% Similarity=0.237 Sum_probs=210.5
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
....|++.+.|| .|++|.||.|.++.+++.||||++.+ ......+.+|+++|+.++||||+++++++
T Consensus 13 ~~~~y~i~~~LG--------~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~ 84 (384)
T 4fr4_A 13 NFDHFEILRAIG--------KGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSF 84 (384)
T ss_dssp CGGGEEEEEEEE--------CCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred ChHHeEEEEEEe--------eCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 334699999999 99999999999999999999999976 45567889999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
.+. ..+|+||||+. +|..++.. ...+++..+..++.||+.||.||| +.||+||||||+||+++.+|.+||+
T Consensus 85 ~~~--~~~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH-~~givHrDlkp~NIll~~~g~vkL~ 157 (384)
T 4fr4_A 85 QDE--EDMFMVVDLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQ-NQRIIHRDMKPDNILLDEHGHVHIT 157 (384)
T ss_dssp ECS--SEEEEEECCCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEEC
T ss_pred EeC--CEEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCcHHHeEECCCCCEEEe
Confidence 988 89999999997 79888842 367999999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCcccc---CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc----------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL---SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS---------- 271 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~---------- 271 (852)
|||++..+... .......||+.|+|||++. +..++.++|||||||++|+|++|..||.+...
T Consensus 158 DFG~a~~~~~~-----~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~ 232 (384)
T 4fr4_A 158 DFNIAAMLPRE-----TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF 232 (384)
T ss_dssp CCTTCEECCTT-----CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH
T ss_pred ccceeeeccCC-----CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHH
Confidence 99998754321 2233567999999999984 45688999999999999999999999964321
Q ss_pred ----ccCcCCCChhHHHHHHHhccCCCCCCCC-HHHHHHhhcCCCCCCcchHH
Q psy3914 272 ----LSNIDNIPENLKRVYLELISERPNQRPN-PADFIMRNRKPGGYFKNDLI 319 (852)
Q Consensus 272 ----l~~~~~ip~~L~~li~~lL~~nP~~Rps-~~elL~~l~~~~~fF~n~lv 319 (852)
......+++.+.++|++||..||.+||+ +.++++| +||++.-.
T Consensus 233 ~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h-----p~f~~~~w 280 (384)
T 4fr4_A 233 ETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF-----PYMNDINW 280 (384)
T ss_dssp HHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS-----GGGTTCCH
T ss_pred hhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC-----hhhhcCCH
Confidence 2234678899999999999999999998 8888876 89987543
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=342.28 Aligned_cols=240 Identities=17% Similarity=0.227 Sum_probs=208.3
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
.+|++++.|| .|++|+||+|+++.+++.|++|++.. ......+.+|+.+|+.++||||+++++++++. .
T Consensus 5 ~~y~~~~~lG--------~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--~ 74 (321)
T 1tki_A 5 EKYMIAEDLG--------RGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESM--E 74 (321)
T ss_dssp TTEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEET--T
T ss_pred hceEeeeEEe--------cCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecC--C
Confidence 4699999999 99999999999999999999999986 33445688999999999999999999999988 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc--CCcEEEcccch
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS--CGEWKLGGLEY 208 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~--~g~~KL~DFg~ 208 (852)
.+|+||||+. +|.+++.. ....+++..+..++.||+.||.||| +.|++||||||+||+++. ++.+||+|||+
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH-~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~ 150 (321)
T 1tki_A 75 ELVMIFEFISGLDIFERINT---SAFELNEREIVSYVHQVCEALQFLH-SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQ 150 (321)
T ss_dssp EEEEEECCCCCCBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEESSSSCCCEEECCCTT
T ss_pred EEEEEEEeCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH-HCCCCcCCCCHHHEEEccCCCCCEEEEECCC
Confidence 9999999997 79888832 2346899999999999999999999 899999999999999997 78999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc---------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--------------- 273 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--------------- 273 (852)
+..+... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus 151 a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 225 (321)
T 1tki_A 151 ARQLKPG-----DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEE 225 (321)
T ss_dssp CEECCTT-----CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHH
T ss_pred CeECCCC-----CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChh
Confidence 8754321 12234568899999999987778999999999999999999999996543211
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
....+|..+.+++.+||..||.+|||+.++++| +||.+.
T Consensus 226 ~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h-----p~~~~~ 264 (321)
T 1tki_A 226 AFKEISIEAMDFVDRLLVKERKSRMTASEALQH-----PWLKQK 264 (321)
T ss_dssp HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS-----HHHHSC
T ss_pred hhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC-----hhhccC
Confidence 125789999999999999999999999999998 787653
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-38 Score=343.46 Aligned_cols=241 Identities=15% Similarity=0.173 Sum_probs=196.9
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
-.+|++.+.|| .|++++||+|+++.+|+.|+||++.. ......+.+|+++|+.++||||+++++++++
T Consensus 33 ~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 104 (329)
T 3gbz_A 33 IDRYRRITKLG--------EGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH 104 (329)
T ss_dssp GGGEEEEEEEE--------ECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE
T ss_pred hhhEEEEEEEE--------ecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec
Confidence 34699999999 99999999999999999999999976 2234467799999999999999999999998
Q ss_pred CCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEc-----cCCcEE
Q psy3914 129 PSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN-----SCGEWK 202 (852)
Q Consensus 129 ~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~-----~~g~~K 202 (852)
. ..+||||||+. +|.+++.. ...+++..+..++.||+.||.||| +.+|+||||||+||+++ ..+.+|
T Consensus 105 ~--~~~~lv~e~~~~~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH-~~~ivH~Dlkp~NIll~~~~~~~~~~~k 177 (329)
T 3gbz_A 105 N--HRLHLIFEYAENDLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCH-SRRCLHRDLKPQNLLLSVSDASETPVLK 177 (329)
T ss_dssp T--TEEEEEEECCSEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEEEC-----CCEEE
T ss_pred C--CEEEEEEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH-hCCEECCCCCHHHEEEecCCCCccceEE
Confidence 8 89999999999 78888843 356899999999999999999999 89999999999999995 445599
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC-------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN------- 274 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~------- 274 (852)
|+|||++...... ........+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+......
T Consensus 178 l~Dfg~a~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~ 253 (329)
T 3gbz_A 178 IGDFGLARAFGIP----IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEV 253 (329)
T ss_dssp ECCTTHHHHHC---------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred ECcCCCccccCCc----ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHH
Confidence 9999999855321 122234567889999999855 5589999999999999999999999965432110
Q ss_pred ----------------------------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 275 ----------------------------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 275 ----------------------------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
...+++.+.+++.+||..||.+|||+.++++| +||++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h-----p~f~~~ 325 (329)
T 3gbz_A 254 LGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH-----PYFSHN 325 (329)
T ss_dssp HCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS-----GGGSSS
T ss_pred hCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC-----cccCCC
Confidence 01167899999999999999999999999998 899753
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-37 Score=351.31 Aligned_cols=239 Identities=14% Similarity=0.206 Sum_probs=206.2
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC----chHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD----TYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~----~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
..|++++.|| .|+||+||+|.++.+|+.|++|++.... ..+.+.+|+++|+.|+||||+++++++++.
T Consensus 11 ~~Y~i~~~LG--------~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 82 (444)
T 3soa_A 11 EEYQLFEELG--------KGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEE 82 (444)
T ss_dssp HHEEEEEEEE--------EC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECS
T ss_pred CCeEEEEEec--------cCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEEC
Confidence 3599999999 9999999999999999999999998732 345688999999999999999999999988
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEc---cCCcEEEc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN---SCGEWKLG 204 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~---~~g~~KL~ 204 (852)
+.+|+||||+. +|.+.+.. .+.+++..+..++.||+.||.||| +.||+||||||+||+++ .++.+||+
T Consensus 83 --~~~~lv~E~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH-~~givHrDlKp~NIll~~~~~~~~vkL~ 155 (444)
T 3soa_A 83 --GHHYLIFDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCH-QMGVVHRNLKPENLLLASKLKGAAVKLA 155 (444)
T ss_dssp --SEEEEEECCCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCSSTTEEESBSSTTCCEEEC
T ss_pred --CEEEEEEEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCHHHEEEeccCCCCcEEEc
Confidence 99999999997 78888743 367999999999999999999999 89999999999999998 46789999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------ 272 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------ 272 (852)
|||++...... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 156 DFG~a~~~~~~----~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~ 231 (444)
T 3soa_A 156 DFGLAIEVEGE----QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 231 (444)
T ss_dssp CCSSCBCCCTT----CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC
T ss_pred cCceeEEecCC----CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCC
Confidence 99998754322 12223467899999999998888999999999999999999999999654321
Q ss_pred ---cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 ---SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 ---~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....+++.+.+++.+||..||.+|||+.++++| +||.+
T Consensus 232 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h-----p~~~~ 273 (444)
T 3soa_A 232 FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH-----PWISH 273 (444)
T ss_dssp CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS-----CTTHH
T ss_pred CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC-----ccccC
Confidence 1235789999999999999999999999999998 89965
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=343.39 Aligned_cols=247 Identities=18% Similarity=0.198 Sum_probs=205.7
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
..+|++.+.|| .|++|+||+|+++.+|+.|+||++.. ......+.+|+++|+.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 87 (351)
T 3mi9_A 16 VSKYEKLAKIG--------QGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 87 (351)
T ss_dssp GGGEEEEEECS--------SCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred ccceeEEEEEe--------cCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeec
Confidence 34699999999 99999999999999999999999866 3345578899999999999999999999987
Q ss_pred CC------CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcE
Q psy3914 129 PS------KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEW 201 (852)
Q Consensus 129 ~~------~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~ 201 (852)
.. .+.+||||||+. +|...+.. ....+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+
T Consensus 88 ~~~~~~~~~~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH-~~~ivH~Dlkp~NIl~~~~~~~ 163 (351)
T 3mi9_A 88 KASPYNRCKGSIYLVFDFCEHDLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYYIH-RNKILHRDMKAANVLITRDGVL 163 (351)
T ss_dssp C--------CEEEEEEECCSEEHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCE
T ss_pred cccccccCCceEEEEEeccCCCHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHH-HCCeeCCCCCHHHEEEcCCCCE
Confidence 41 257999999999 77777743 2356899999999999999999999 8999999999999999999999
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC------
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN------ 274 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~------ 274 (852)
||+|||++..+...............||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+......
T Consensus 164 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~ 243 (351)
T 3mi9_A 164 KLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 243 (351)
T ss_dssp EECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred EEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 999999998654332223333445678999999999854 5678999999999999999999999965422100
Q ss_pred ---------cCC----------------------------CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 275 ---------IDN----------------------------IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 275 ---------~~~----------------------------ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
... .++.+.+++.+||..||.+|||+.++++| +||.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h-----p~f~~ 317 (351)
T 3mi9_A 244 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH-----DFFWS 317 (351)
T ss_dssp HHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS-----GGGGS
T ss_pred HhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC-----CCcCC
Confidence 000 26678999999999999999999999998 88865
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-37 Score=334.94 Aligned_cols=236 Identities=14% Similarity=0.218 Sum_probs=206.6
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
|+..+.|| .|++|.||.|+++.+|+.|+||++.. ....+.+.+|+.+++.++||||+++++++... +.
T Consensus 47 ~~~~~~lg--------~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~ 116 (321)
T 2c30_A 47 LDSYVKIG--------EGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVG--EE 116 (321)
T ss_dssp EEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEET--TE
T ss_pred hhccEEec--------cCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEEC--CE
Confidence 78888999 99999999999999999999999987 44567889999999999999999999999987 89
Q ss_pred EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 134 VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 134 ~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
+|+||||+. +|.+++.+ ..+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++..
T Consensus 117 ~~lv~e~~~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 190 (321)
T 2c30_A 117 LWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLH-AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQ 190 (321)
T ss_dssp EEEEECCCCSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHEEECCCCcEEEeeeeeeee
Confidence 999999997 79888732 46899999999999999999999 89999999999999999999999999999875
Q ss_pred cccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------ccCcCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------LSNIDN 277 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------l~~~~~ 277 (852)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+... ......
T Consensus 191 ~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (321)
T 2c30_A 191 ISKDV----PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHK 266 (321)
T ss_dssp CCSSS----CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGG
T ss_pred cccCc----cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCcccc
Confidence 43221 122345789999999999888889999999999999999999999965422 122346
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
+++.+.+++.+||..||.+||++.++++| +||..
T Consensus 267 ~~~~l~~li~~~l~~dp~~Rps~~ell~h-----p~~~~ 300 (321)
T 2c30_A 267 VSPVLRDFLERMLVRDPQERATAQELLDH-----PFLLQ 300 (321)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHTS-----GGGGG
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhcC-----hhhcc
Confidence 78899999999999999999999999997 78853
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-37 Score=336.95 Aligned_cols=242 Identities=15% Similarity=0.242 Sum_probs=200.6
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEc---CCCeEEEEEEEeCC------CchHHHHHHHHHHHhCCCCCcceE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK---GSNEKVTIFLNDSA------DTYEPALSYVKKLKTLRHPSILTF 122 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k---~~g~~VaVKv~~~~------~~~~~~~~E~~~Lk~LrHPnIlk~ 122 (852)
....|++.+.|| .|++|.||+|++. .+|+.|+||++... .....+.+|+.+|+.++||||+++
T Consensus 15 ~~~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~ 86 (327)
T 3a62_A 15 RPECFELLRVLG--------KGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDL 86 (327)
T ss_dssp CGGGEEEEEEEE--------EETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCE
T ss_pred CHHHeEEEEEEE--------eCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccce
Confidence 345699999999 9999999999985 68999999999862 234567889999999999999999
Q ss_pred eeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc
Q psy3914 123 LDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE 200 (852)
Q Consensus 123 ~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~ 200 (852)
++++.+. +.+||||||+. +|.+++.. .+.+++..+..++.||+.||.||| +.|++||||||+||+++.+|.
T Consensus 87 ~~~~~~~--~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH-~~~ivH~Dlkp~Nill~~~~~ 159 (327)
T 3a62_A 87 IYAFQTG--GKLYLILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMALGHLH-QKGIIYRDLKPENIMLNHQGH 159 (327)
T ss_dssp EEEEECS--SCEEEEEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCTTTEEECTTSC
T ss_pred eEEEEcC--CEEEEEEeCCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHH-hCCEEcccCCHHHeEECCCCc
Confidence 9999987 89999999997 79888843 257899999999999999999999 899999999999999999999
Q ss_pred EEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc---------
Q psy3914 201 WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------- 271 (852)
Q Consensus 201 ~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------- 271 (852)
+||+|||++....... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus 160 ~kl~Dfg~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~ 235 (327)
T 3a62_A 160 VKLTDFGLCKESIHDG----TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235 (327)
T ss_dssp EEECCCSCC--------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred EEEEeCCcccccccCC----ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 9999999987432211 122345789999999999888889999999999999999999999965432
Q ss_pred --ccCcCCCChhHHHHHHHhccCCCCCCC-----CHHHHHHhhcCCCCCCcch
Q psy3914 272 --LSNIDNIPENLKRVYLELISERPNQRP-----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 272 --l~~~~~ip~~L~~li~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n~ 317 (852)
......+++.+.+++.+||..||.+|| ++.++++| +||++.
T Consensus 236 ~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h-----p~f~~~ 283 (327)
T 3a62_A 236 CKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH-----PFFRHI 283 (327)
T ss_dssp TCCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS-----GGGSSC
T ss_pred CCCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC-----CcccCC
Confidence 223467889999999999999999999 88899998 899764
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=334.53 Aligned_cols=239 Identities=16% Similarity=0.213 Sum_probs=199.5
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC----chHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD----TYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~----~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|++|+||+|+++.+|+.|+||++.... ....+.+|+++++.++||||+++++++.+.
T Consensus 3 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 74 (311)
T 4agu_A 3 EKYEKIGKIG--------EGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRK 74 (311)
T ss_dssp CCEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred ccceEeeEEe--------ecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecC
Confidence 3599999999 9999999999999999999999987622 245677899999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+.+|+||||+. +|..++. ....+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|||
T Consensus 75 --~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~i~~~l~~~l~~lH-~~~ivH~dlkp~Nil~~~~~~~kl~Dfg 147 (311)
T 4agu_A 75 --RRLHLVFEYCDHTVLHELDR----YQRGVPEHLVKSITWQTLQAVNFCH-KHNCIHRDVKPENILITKHSVIKLCDFG 147 (311)
T ss_dssp --TEEEEEEECCSEEHHHHHHH----TSSCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred --CeEEEEEEeCCCchHHHHHh----hhcCCCHHHHHHHHHHHHHHHHHHH-HCCCcCCCCChhhEEEcCCCCEEEeeCC
Confidence 89999999999 4666652 2367899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------- 273 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------- 273 (852)
++...... ........+|+.|+|||++. ...++.++|||||||++|+|++|..||.+.....
T Consensus 148 ~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 223 (311)
T 4agu_A 148 FARLLTGP----SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLI 223 (311)
T ss_dssp TCEECC----------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCC
T ss_pred CchhccCc----ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccc
Confidence 98754321 11223456788999999984 4678899999999999999999999996542110
Q ss_pred -----------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 -----------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 -----------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++++||..||.+|||+.++++| +||++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h-----p~f~~ 290 (311)
T 4agu_A 224 PRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH-----PYFEN 290 (311)
T ss_dssp HHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS-----GGGTT
T ss_pred cccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC-----hHHHh
Confidence 014678889999999999999999999999998 89976
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=332.97 Aligned_cols=240 Identities=15% Similarity=0.182 Sum_probs=208.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC--------chHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD--------TYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~--------~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
..|++++.|| .|++|.||.|+++.+|+.|+||++.... ..+.+.+|+.+++.++||||++++++
T Consensus 12 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 83 (321)
T 2a2a_A 12 DFYDIGEELG--------SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDV 83 (321)
T ss_dssp HHEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccEEEeeEee--------ecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 3599999999 9999999999999999999999998711 35779999999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC----
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG---- 199 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g---- 199 (852)
+.+. ..+|+||||+. +|.+++.. ...+++..+..++.||+.||.||| +.+++||||||+||+++.++
T Consensus 84 ~~~~--~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH-~~~ivH~dikp~NIl~~~~~~~~~ 156 (321)
T 2a2a_A 84 YENR--TDVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIP 156 (321)
T ss_dssp EECS--SEEEEEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEESCTTSSSC
T ss_pred EecC--CEEEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCChHHEEEecCCCCcC
Confidence 9987 89999999996 79998842 357899999999999999999999 89999999999999999988
Q ss_pred cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc------
Q psy3914 200 EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------ 273 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------ 273 (852)
.+||+|||++....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus 157 ~~kl~Dfg~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~ 231 (321)
T 2a2a_A 157 HIKLIDFGLAHEIEDGV-----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231 (321)
T ss_dssp CEEECCCTTCEECCTTC-----CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH
T ss_pred CEEEccCccceecCccc-----cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 79999999987543321 1234568899999999988888999999999999999999999996542211
Q ss_pred ---------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchH
Q psy3914 274 ---------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 274 ---------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~l 318 (852)
....+|..+.+++.+||..||.+|||+.++++| +||.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h-----p~~~~~~ 280 (321)
T 2a2a_A 232 SVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH-----PWITPVD 280 (321)
T ss_dssp TTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS-----TTTSCSS
T ss_pred hcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC-----ccccCCC
Confidence 125688899999999999999999999999998 9997643
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=359.35 Aligned_cols=238 Identities=15% Similarity=0.188 Sum_probs=198.0
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++++.|| .|+||+||.|.++.+|+.||||++.. ......+.+|+++|+.++||||+++++++...
T Consensus 62 ~~y~~~~~lG--------~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 133 (464)
T 3ttj_A 62 KRYQNLKPIG--------SGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ 133 (464)
T ss_dssp TTEEEEEEEE--------ECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred CCeEEEEEee--------cCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccC
Confidence 4599999999 99999999999999999999999986 22345788999999999999999999999654
Q ss_pred C----CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 130 S----KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 130 ~----~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
. ...+||||||+. +|...+. ..+++..+..+++||+.||.||| +.||+||||||+||+++.+|.+||+
T Consensus 134 ~~~~~~~~~~lv~E~~~~~l~~~~~------~~l~~~~~~~~~~qil~aL~~lH-~~~iiHrDlkp~NIll~~~~~~kl~ 206 (464)
T 3ttj_A 134 KTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSDCTLKIL 206 (464)
T ss_dssp CSTTTCCEEEEEEECCSEEHHHHHT------SCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTSCEEEC
T ss_pred CccccCCeEEEEEeCCCCCHHHHHh------hcCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCChHhEEEeCCCCEEEE
Confidence 1 146899999999 7777762 35899999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccCc---------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI--------- 275 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~~--------- 275 (852)
|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|..||.+.+...++
T Consensus 207 DFG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~ 281 (464)
T 3ttj_A 207 DFGLARTAGTS-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 281 (464)
T ss_dssp CCCCC-----C-----CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCS
T ss_pred EEEeeeecCCC-----cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99998754321 1223467899999999998888999999999999999999999999765321110
Q ss_pred -----------------------CC---------------------CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCC
Q psy3914 276 -----------------------DN---------------------IPENLKRVYLELISERPNQRPNPADFIMRNRKPG 311 (852)
Q Consensus 276 -----------------------~~---------------------ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~ 311 (852)
.. .++.+.+++++||..||.+|||+.++++|
T Consensus 282 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H----- 356 (464)
T 3ttj_A 282 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH----- 356 (464)
T ss_dssp CCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS-----
T ss_pred CCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC-----
Confidence 00 04568999999999999999999999998
Q ss_pred CCCcc
Q psy3914 312 GYFKN 316 (852)
Q Consensus 312 ~fF~n 316 (852)
+||+.
T Consensus 357 p~~~~ 361 (464)
T 3ttj_A 357 PYINV 361 (464)
T ss_dssp TTTGG
T ss_pred hhhhh
Confidence 99974
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-37 Score=334.34 Aligned_cols=244 Identities=18% Similarity=0.200 Sum_probs=201.1
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-------CCchHHHHHHHHHHHhCC---CCCcceE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-------ADTYEPALSYVKKLKTLR---HPSILTF 122 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-------~~~~~~~~~E~~~Lk~Lr---HPnIlk~ 122 (852)
..+|++.+.|| .|++|+||+|+++.+|+.|+||++.. ........+|+.+++.++ ||||+++
T Consensus 8 ~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~ 79 (308)
T 3g33_A 8 TSRYEPVAEIG--------VGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRL 79 (308)
T ss_dssp --CCEEEEEEC--------CSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCE
T ss_pred ccceEEEEEEe--------cCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEe
Confidence 45799999999 99999999999999999999999875 122346677877777665 9999999
Q ss_pred eeeEEcCCC---CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC
Q psy3914 123 LDSVESPSK---SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC 198 (852)
Q Consensus 123 ~d~~e~~~~---~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~ 198 (852)
++++..... ..+|+||||+. +|.+++... ....+++..+..++.||+.||.||| +.+++||||||+||+++.+
T Consensus 80 ~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH-~~~ivH~Dlkp~Nil~~~~ 156 (308)
T 3g33_A 80 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA--PPPGLPAETIKDLMRQFLRGLDFLH-ANCIVHRDLKPENILVTSG 156 (308)
T ss_dssp EEEEEECCSSSEEEEEEEEECCCCBHHHHHHTC--CTTCSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCTTTEEECTT
T ss_pred eeeeeccCCCCceeEEEEehhhhcCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEEcCC
Confidence 999987521 16899999999 899888432 2234899999999999999999999 8999999999999999999
Q ss_pred CcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-----
Q psy3914 199 GEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS----- 273 (852)
Q Consensus 199 g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~----- 273 (852)
|.+||+|||++...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus 157 ~~~kl~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i 231 (308)
T 3g33_A 157 GTVKLADFGLARIYSYQ-----MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 231 (308)
T ss_dssp SCEEECSCSCTTTSTTC-----CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHH
T ss_pred CCEEEeeCccccccCCC-----cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999999998754321 12234578999999999977889999999999999999999999996542211
Q ss_pred ---------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 274 ---------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 274 ---------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
....+++.+.+++.+||..||.+|||+.++++| +||++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h-----~~~~~~ 303 (308)
T 3g33_A 232 FDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH-----SYLHKD 303 (308)
T ss_dssp HHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS-----TTC---
T ss_pred HHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC-----ccccCC
Confidence 013578899999999999999999999999998 999753
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=344.58 Aligned_cols=237 Identities=15% Similarity=0.254 Sum_probs=205.3
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
.|++++.|| .|++|.||+|.++.+|..|+||++... ...+.+.+|+.+++.|+||||+++++++++.
T Consensus 30 ~y~~~~~lG--------~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~- 100 (362)
T 2bdw_A 30 NYDVKEELG--------KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE- 100 (362)
T ss_dssp HEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-
T ss_pred CeEEeeEEe--------cCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-
Confidence 599999999 999999999999999999999999872 2345788999999999999999999999988
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC---cEEEcc
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG---EWKLGG 205 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g---~~KL~D 205 (852)
+.+|+||||+. +|.+++. ....+++..+..++.||+.||.||| +.+|+||||||+||+++.++ .+||+|
T Consensus 101 -~~~~lv~e~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH-~~~ivH~Dlkp~NIll~~~~~~~~~kl~D 174 (362)
T 2bdw_A 101 -SFHYLVFDLVTGGELFEDIV----AREFYSEADASHCIQQILESIAYCH-SNGIVHRNLKPENLLLASKAKGAAVKLAD 174 (362)
T ss_dssp -SEEEEEECCCCSCBHHHHHT----TCSCCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCSGGGEEESCSSTTCCEEECC
T ss_pred -CEEEEEEecCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeccCchHHEEEecCCCCCCEEEee
Confidence 89999999998 7888873 2357899999999999999999999 89999999999999998754 599999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-------------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------- 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------- 272 (852)
||++...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 175 fG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~ 249 (362)
T 2bdw_A 175 FGLAIEVNDS-----EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 249 (362)
T ss_dssp CTTCBCCTTC-----CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC
T ss_pred cCcceEecCC-----cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 9998754321 1223467899999999998888999999999999999999999999654321
Q ss_pred --cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 --SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 --~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....+|+.+.+++.+||..||.+||++.++++| +||.+
T Consensus 250 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h-----p~~~~ 290 (362)
T 2bdw_A 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV-----PWICN 290 (362)
T ss_dssp CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS-----HHHHT
T ss_pred CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC-----cccCC
Confidence 1124679999999999999999999999999997 77754
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=341.89 Aligned_cols=239 Identities=21% Similarity=0.263 Sum_probs=198.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
+|++.+.|| .|++|+||+|+++.+++.|+||++.... ....+.+|+++|+.++||||+++++++.+.
T Consensus 3 ~y~~~~~lG--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 72 (324)
T 3mtl_A 3 TYIKLDKLG--------EGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE-- 72 (324)
T ss_dssp SEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECS--
T ss_pred ceEEEEEEc--------CCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeC--
Confidence 599999999 9999999999999999999999997621 111345799999999999999999999987
Q ss_pred CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
..+||||||+. +|.+++... ...+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|||++.
T Consensus 73 ~~~~lv~e~~~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 148 (324)
T 3mtl_A 73 KSLTLVFEYLDKDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCH-RQKVLHRDLKPQNLLINERGELKLADFGLAR 148 (324)
T ss_dssp SCEEEEEECCSEEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHH-HTTEEESSCCGGGEEECTTCCEEECSSSEEE
T ss_pred CEEEEEecccccCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH-HCCccCCCcCHHHEEECCCCCEEEccCcccc
Confidence 89999999999 788888532 356899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc----------------
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---------------- 273 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---------------- 273 (852)
.... +........+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.....
T Consensus 149 ~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 224 (324)
T 3mtl_A 149 AKSI----PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEET 224 (324)
T ss_dssp CC----------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred cccC----CccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHh
Confidence 4322 1222234567889999999854 678999999999999999999999996542110
Q ss_pred -------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 -------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 -------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++++||..||.+|||+.++++| +||.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h-----p~f~~ 287 (324)
T 3mtl_A 225 WPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH-----PFFLS 287 (324)
T ss_dssp STTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS-----GGGGG
T ss_pred chhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC-----hhhhh
Confidence 123578899999999999999999999999998 88865
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-37 Score=326.89 Aligned_cols=237 Identities=20% Similarity=0.299 Sum_probs=204.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.+|++++.|| .|++|+||.|.++.++..|+||++.. ......+.+|+.+++.++||||+++++++.+
T Consensus 9 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 80 (279)
T 3fdn_A 9 EDFEIGRPLG--------KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD 80 (279)
T ss_dssp GGEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccEEEeeEEe--------cCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec
Confidence 4699999999 99999999999999999999999976 3345678999999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. ...|+||||+. +|.+++.+. ..+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+||
T Consensus 81 ~--~~~~lv~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH-~~~i~H~dlkp~Nili~~~~~~~l~Df 153 (279)
T 3fdn_A 81 A--TRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCH-SKRVIHRDIKPENLLLGSAGELKIADF 153 (279)
T ss_dssp S--SEEEEEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH-TTTCEECCCCGGGEEECTTSCEEECSC
T ss_pred C--CEEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH-hCCEecccCChHhEEEcCCCCEEEEec
Confidence 7 89999999998 788888432 56899999999999999999999 999999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNI 275 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~ 275 (852)
|++...... ......|++.|+|||++.+..++.++|||||||++|+|++|..||.+... ....
T Consensus 154 g~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 227 (279)
T 3fdn_A 154 GWSVHAPSS------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 227 (279)
T ss_dssp CEESCC--------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC
T ss_pred cccccCCcc------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCC
Confidence 997643221 12245678899999999888888999999999999999999999965432 1234
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
..+++.+.+++.+||..||.+||++.++++| +||.+
T Consensus 228 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h-----~~~~~ 263 (279)
T 3fdn_A 228 DFVTEGARDLISRLLKHNPSQRPMLREVLEH-----PWITA 263 (279)
T ss_dssp TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC-----HHHHH
T ss_pred CcCCHHHHHHHHHHhccChhhCCCHHHHhhC-----ccccC
Confidence 5688999999999999999999999999998 67654
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=326.63 Aligned_cols=243 Identities=16% Similarity=0.244 Sum_probs=205.4
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
....|.+.+.|| .|++|+||+|.++.++..|+||++.. ....+.+.+|+++|+.++||||+++++++.+
T Consensus 20 i~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 91 (285)
T 3is5_A 20 IDDLFIFKRKLG--------SGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED 91 (285)
T ss_dssp HHHHEEEEEEEE--------ECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred hhhheeecceec--------cCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec
Confidence 334699999999 99999999999999999999999987 3456789999999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE---ccCCcEEE
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI---NSCGEWKL 203 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV---~~~g~~KL 203 (852)
. ..+|+||||+. +|.+++.........+++..+..++.||+.||.||| +.+++||||||+||++ +.++.+||
T Consensus 92 ~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH-~~~ivH~dikp~NIl~~~~~~~~~~kl 168 (285)
T 3is5_A 92 Y--HNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH-SQHVVHKDLKPENILFQDTSPHSPIKI 168 (285)
T ss_dssp S--SEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCSGGGEEESSSSTTCCEEE
T ss_pred C--CeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH-hCCEEECCCCHHHEEEecCCCCCCEEE
Confidence 7 89999999997 798888665555678999999999999999999999 8999999999999999 45688999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----------- 272 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----------- 272 (852)
+|||++...... .......+|+.|+|||++. ..++.++|||||||++|+|++|..||.+....
T Consensus 169 ~Dfg~a~~~~~~-----~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~ 242 (285)
T 3is5_A 169 IDFGLAELFKSD-----EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP 242 (285)
T ss_dssp CCCCCCCC---------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred EeeecceecCCc-----ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCc
Confidence 999998754321 1122456888999999985 45788999999999999999999999654211
Q ss_pred ---cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 ---SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 ---~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....+++.+.+++++||..||.+||++.++++| +||++
T Consensus 243 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h-----p~f~~ 284 (285)
T 3is5_A 243 NYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH-----EWFKQ 284 (285)
T ss_dssp CCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS-----GGGGC
T ss_pred ccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC-----HHhhc
Confidence 1124578999999999999999999999999997 89874
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-37 Score=349.79 Aligned_cols=246 Identities=13% Similarity=0.143 Sum_probs=201.0
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
..+|++++.|| .|++|.||+|+++.+|+.||||++... .....+.+|+++|+.++||||+++++++..
T Consensus 25 ~~~y~~~~~lG--------~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 96 (432)
T 3n9x_A 25 PDNYIIKHLIG--------RGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIP 96 (432)
T ss_dssp CTTEEEEEEEE--------EETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCC
T ss_pred cCCEEEEEEEe--------ecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEec
Confidence 34699999999 999999999999999999999999761 234578899999999999999999999876
Q ss_pred CCC---CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 129 PSK---SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 129 ~~~---~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
... ..+||||||+. +|.+++. ....+++..++.+++||+.||.||| +.||+||||||+||+|+.+|.+||+
T Consensus 97 ~~~~~~~~~~lv~e~~~~~L~~~~~----~~~~l~~~~~~~i~~qil~aL~~LH-~~givHrDlkp~NILl~~~~~~kL~ 171 (432)
T 3n9x_A 97 DDLLKFDELYIVLEIADSDLKKLFK----TPIFLTEEHIKTILYNLLLGENFIH-ESGIIHRDLKPANCLLNQDCSVKVC 171 (432)
T ss_dssp SCTTTCCCEEEEEECCSEEHHHHHH----SSCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEEC
T ss_pred CCCCcCCeEEEEEecCCcCHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHH-HCCCCCCCCCHHHeEECCCCCEEEc
Confidence 521 46999999999 7988883 3367999999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCC------------------CcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCC
Q psy3914 205 GLEYMEKISEASCIP------------------MKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQ 265 (852)
Q Consensus 205 DFg~a~~~~~~~~~~------------------~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~p 265 (852)
|||+++......... ........||+.|+|||++ ....++.++|||||||++|||++|..|
T Consensus 172 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p 251 (432)
T 3n9x_A 172 DFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251 (432)
T ss_dssp CCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTT
T ss_pred cCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccc
Confidence 999998654321110 0123456789999999996 667799999999999999999985443
Q ss_pred -----------CCCCccc-----------------------------------------------------------cCc
Q psy3914 266 -----------STNRKSL-----------------------------------------------------------SNI 275 (852)
Q Consensus 266 -----------f~~~~~l-----------------------------------------------------------~~~ 275 (852)
|.+.... ...
T Consensus 252 ~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (432)
T 3n9x_A 252 HINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKY 331 (432)
T ss_dssp TCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHS
T ss_pred cccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHC
Confidence 3332110 001
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
..+++.+.+++++||..||.+|||+.++++| +||++
T Consensus 332 ~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H-----p~f~~ 367 (432)
T 3n9x_A 332 PSISDDGINLLESMLKFNPNKRITIDQALDH-----PYLKD 367 (432)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTC-----GGGTT
T ss_pred CCCCHHHHHHHHHHhcCCcccCCCHHHHhcC-----hhhhh
Confidence 4578999999999999999999999999998 88865
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=331.11 Aligned_cols=240 Identities=14% Similarity=0.151 Sum_probs=203.5
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.+|++++.|| .|++|+||+|+++.+++.|+||++.. ......+.+|+++++.++||||+++++++.++
T Consensus 10 ~~~~~~~~lG--------~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 79 (310)
T 3s95_A 10 SDLIHGEVLG--------KGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD-- 79 (310)
T ss_dssp GGEEEEEEEE--------CCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET--
T ss_pred hHeeccceec--------CCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecC--
Confidence 4699999999 99999999999999999999998865 23456788999999999999999999999988
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+|+||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH-~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 155 (310)
T 3s95_A 80 KRLNFITEYIKGGTLRGIIKS---MDSQYPWSQRVSFAKDIASGMAYLH-SMNIIHRDLNSHNCLVRENKNVVVADFGLA 155 (310)
T ss_dssp TEEEEEEECCTTCBHHHHHHH---CCTTSCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSTTSEEECTTSCEEECCCTTC
T ss_pred CeeEEEEEecCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHH-hCCccCCCCCcCeEEECCCCCEEEeecccc
Confidence 89999999998 79999853 2367899999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCC----------cccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-------
Q psy3914 210 EKISEASCIPM----------KRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------- 272 (852)
Q Consensus 210 ~~~~~~~~~~~----------~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------- 272 (852)
........... .......||+.|+|||++.+..++.++|||||||++|+|++|..|+......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~ 235 (310)
T 3s95_A 156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN 235 (310)
T ss_dssp EECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC
T ss_pred eecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh
Confidence 75543221111 1111457899999999998888999999999999999999998887542211
Q ss_pred -------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 273 -------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 273 -------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.....+|+.+.+++.+||+.||.+||++.++++.+
T Consensus 236 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L 277 (310)
T 3s95_A 236 VRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWL 277 (310)
T ss_dssp HHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hhccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 11467899999999999999999999999998753
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=336.97 Aligned_cols=247 Identities=17% Similarity=0.233 Sum_probs=200.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC-
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS- 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~- 130 (852)
+|++.+.|| .|++|.||+|+++.+|+.||||++.. ....+.+.+|+++|+.|+||||+++++++.+..
T Consensus 7 ~y~~~~~lG--------~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 78 (332)
T 3qd2_B 7 DFEPIQCMG--------RGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPP 78 (332)
T ss_dssp HEEEEEEEE--------CC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCS
T ss_pred cCceeeEec--------CCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEecc
Confidence 499999999 99999999999999999999999986 335577899999999999999999999886531
Q ss_pred ------------------------------------------------------CCeEEEEEeecc--cHHHHHHhhhhc
Q psy3914 131 ------------------------------------------------------KSLVYLAVEYVE--PIFYHLDNTLKE 154 (852)
Q Consensus 131 ------------------------------------------------------~~~~yIVtE~v~--~L~~~L~~~~~~ 154 (852)
..++|+||||+. +|.+++... ..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~ 157 (332)
T 3qd2_B 79 EKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR-CS 157 (332)
T ss_dssp CHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTC-CS
T ss_pred chhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcc-cC
Confidence 124899999998 799998532 22
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCC--------Ccccccc
Q psy3914 155 NNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIP--------MKRYSRY 226 (852)
Q Consensus 155 ~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~--------~~~~~~~ 226 (852)
........+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++.......... .......
T Consensus 158 ~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T 3qd2_B 158 LEDREHGVCLHIFIQIAEAVEFLH-SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQ 236 (332)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSC
T ss_pred ccchhhHHHHHHHHHHHHHHHHHH-hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcccccccccccccccc
Confidence 234566678999999999999999 8999999999999999999999999999988654321110 1122345
Q ss_pred cCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc----------ccCcCCCChhHHHHHHHhccCCCCC
Q psy3914 227 EDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS----------LSNIDNIPENLKRVYLELISERPNQ 296 (852)
Q Consensus 227 ~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~----------l~~~~~ip~~L~~li~~lL~~nP~~ 296 (852)
.||+.|+|||++.+..++.++|||||||++|+|++|..|+..... .......++.+.+++.+||..||.+
T Consensus 237 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 316 (332)
T 3qd2_B 237 VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTE 316 (332)
T ss_dssp C-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGG
T ss_pred CCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCc
Confidence 789999999999888899999999999999999999777622110 0112345677899999999999999
Q ss_pred CCCHHHHHHhhcCCCCCCcc
Q psy3914 297 RPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 297 Rps~~elL~~l~~~~~fF~n 316 (852)
||++.++++| +||++
T Consensus 317 Rps~~~~l~~-----~~f~~ 331 (332)
T 3qd2_B 317 RPEATDIIEN-----AIFEN 331 (332)
T ss_dssp SCCHHHHHHS-----TTCCC
T ss_pred CCCHHHHhhc-----hhhhc
Confidence 9999999998 99976
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-37 Score=342.15 Aligned_cols=240 Identities=14% Similarity=0.198 Sum_probs=196.9
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
...+|++.+.|| .|++|+||.|+++.+++.||||++.. ......+.+|+.+++.++||||+++++++.+.
T Consensus 18 ~~~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~- 88 (361)
T 3uc3_A 18 DSDRYDFVKDIG--------SGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTP- 88 (361)
T ss_dssp CTTTEEEEEEES--------SSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECS-
T ss_pred CCCcEEEEEEec--------cCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeC-
Confidence 345799999999 99999999999999999999999987 34457789999999999999999999999987
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc--EEEccc
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE--WKLGGL 206 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~--~KL~DF 206 (852)
..+||||||+. +|.+++.. .+.+++..+..++.||+.||.||| +.|++||||||+||+++.++. +||+||
T Consensus 89 -~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~ql~~~L~~LH-~~~ivH~Dlkp~Nill~~~~~~~~kl~Df 162 (361)
T 3uc3_A 89 -THLAIIMEYASGGELYERICN----AGRFSEDEARFFFQQLLSGVSYCH-SMQICHRDLKLENTLLDGSPAPRLKICDF 162 (361)
T ss_dssp -SEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH-HTTCCSCCCCGGGEEECSSSSCCEEECCC
T ss_pred -CEEEEEEEeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEEcCCCCceEEEeec
Confidence 89999999997 79888843 257999999999999999999999 899999999999999988765 999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcc-hhHHhHHHHHHHHHhCCCCCCCCcccc------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCS-TDMYGLGILIWEVFNGPLQSTNRKSLS------------ 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~-sDIwSLG~ll~el~tG~~pf~~~~~l~------------ 273 (852)
|+++.... ........||+.|+|||++.+..+... +|||||||++|+|++|..||.+.....
T Consensus 163 g~a~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 237 (361)
T 3uc3_A 163 GYSKSSVL-----HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSV 237 (361)
T ss_dssp CCC--------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTT
T ss_pred Cccccccc-----cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcC
Confidence 99863221 111224568999999999966565544 899999999999999999996532211
Q ss_pred -----CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 -----NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 -----~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.++|++||..||.+|||+.++++| +||..
T Consensus 238 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h-----p~f~~ 280 (361)
T 3uc3_A 238 KYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH-----SWFLK 280 (361)
T ss_dssp CCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS-----HHHHT
T ss_pred CCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC-----cchhc
Confidence 123578999999999999999999999999998 77743
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-37 Score=325.69 Aligned_cols=242 Identities=13% Similarity=0.208 Sum_probs=206.7
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
+|++++.|| .|++|.||.|+++.+++.|+||+++. ....+.+.+|+.+++.++||||+++++++.+.
T Consensus 8 ~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 77 (276)
T 2yex_A 8 DWDLVQTLG--------EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG-- 77 (276)
T ss_dssp HEEEEEEEE--------ECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--
T ss_pred ceEEEEEee--------cCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcC--
Confidence 499999999 99999999999999999999999976 33457889999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+..|+||||+. +|.+++. ....+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.+||+|||++
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 152 (276)
T 2yex_A 78 NIQYLFLEYCSGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLA 152 (276)
T ss_dssp TEEEEEEECCTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CEEEEEEEecCCCcHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHH-hCCeeccCCChHHEEEccCCCEEEeeCCCc
Confidence 89999999997 6877763 3357899999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCC-CCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------cC
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHV-TKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------SN 274 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------~~ 274 (852)
..+..... ........|++.|+|||++.+.. ++.++|||||||++|+|++|..||.+.... ..
T Consensus 153 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 230 (276)
T 2yex_A 153 TVFRYNNR--ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP 230 (276)
T ss_dssp EECEETTE--ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTT
T ss_pred cccCCCcc--hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCc
Confidence 75432211 11223456888999999986544 467899999999999999999999643221 12
Q ss_pred cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchH
Q psy3914 275 IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 275 ~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~l 318 (852)
...+++.+.+++.+||..||.+|||+.++++| +||++.+
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~-----~~~~~~~ 269 (276)
T 2yex_A 231 WKKIDSAPLALLHKILVENPSARITIPDIKKD-----RWYNKPL 269 (276)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC-----TTTTCCC
T ss_pred hhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC-----ccccChh
Confidence 34688999999999999999999999999997 8998764
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-37 Score=347.81 Aligned_cols=242 Identities=16% Similarity=0.242 Sum_probs=208.2
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
...+|++.+.|| .|+||+||+|+++.+++.||||++.+ ......+.+|+.+++.++||||+++++++
T Consensus 67 ~~~~y~~~~~LG--------~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~ 138 (410)
T 3v8s_A 67 KAEDYEVVKVIG--------RGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF 138 (410)
T ss_dssp CGGGEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CccccEEEEEEE--------cCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 345699999999 99999999999999999999999976 33445688999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
++. ..+||||||+. +|.+++.+ ..+++..++.++.||+.||.||| +.+|+||||||+||+++.+|.+||+
T Consensus 139 ~~~--~~~~lV~E~~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH-~~givHrDLKp~NILl~~~g~ikL~ 210 (410)
T 3v8s_A 139 QDD--RYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIH-SMGFIHRDVKPDNMLLDKSGHLKLA 210 (410)
T ss_dssp ECS--SEEEEEECCCTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEEC
T ss_pred EEC--CEEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH-HCCeEeccCCHHHeeECCCCCEEEe
Confidence 988 99999999997 79988843 46899999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCC----CCcchhHHhHHHHHHHHHhCCCCCCCCccc--------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHV----TKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------- 272 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~----~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------- 272 (852)
|||++....... ........||+.|+|||++.+.. ++.++|+|||||++|||++|..||.+....
T Consensus 211 DFG~a~~~~~~~---~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~ 287 (410)
T 3v8s_A 211 DFGTCMKMNKEG---MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 287 (410)
T ss_dssp CCTTCEECCTTS---EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred ccceeEeeccCC---cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHh
Confidence 999987543211 11223567999999999985443 778999999999999999999999754321
Q ss_pred -------cCcCCCChhHHHHHHHhccCCCCC--CCCHHHHHHhhcCCCCCCcch
Q psy3914 273 -------SNIDNIPENLKRVYLELISERPNQ--RPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 -------~~~~~ip~~L~~li~~lL~~nP~~--Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....+++.+.++|++||..+|.+ |+++.++++| +||++.
T Consensus 288 ~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H-----p~f~~~ 336 (410)
T 3v8s_A 288 HKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH-----LFFKND 336 (410)
T ss_dssp HHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS-----GGGCCS
T ss_pred ccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC-----ccccCC
Confidence 112368999999999999999988 9999999998 899763
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-37 Score=352.18 Aligned_cols=241 Identities=17% Similarity=0.255 Sum_probs=200.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.+|++.+.|| .|++|.||+|+++.+|+.||||++.. ......+.+|+++|+.++||||+++++++.+
T Consensus 148 ~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~ 219 (446)
T 4ejn_A 148 NEFEYLKLLG--------KGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT 219 (446)
T ss_dssp GGEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE
T ss_pred HHcEEeEEEe--------eCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee
Confidence 4699999999 99999999999999999999999976 2344567789999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. +.+||||||+. +|..++.+ ...+++..+..++.||+.||.|||+..||+||||||+||+++.+|.+||+||
T Consensus 220 ~--~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DF 293 (446)
T 4ejn_A 220 H--DRLCFVMEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF 293 (446)
T ss_dssp T--TEEEEEECCCSSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCC
T ss_pred C--CEEEEEEeeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccC
Confidence 8 89999999998 78888843 2578999999999999999999993399999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNI 275 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~ 275 (852)
|++...... ........||+.|+|||++.+..++.++|||||||++|||++|..||.+... ...+
T Consensus 294 G~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p 369 (446)
T 4ejn_A 294 GLCKEGIKD----GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 369 (446)
T ss_dssp CCCCTTCC---------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred CCceeccCC----CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 998743211 1223346789999999999888899999999999999999999999965432 2335
Q ss_pred CCCChhHHHHHHHhccCCCCCCC-----CHHHHHHhhcCCCCCCcch
Q psy3914 276 DNIPENLKRVYLELISERPNQRP-----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n~ 317 (852)
..+++.+.++|.+||..||.+|| ++.++++| +||.+.
T Consensus 370 ~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h-----p~f~~~ 411 (446)
T 4ejn_A 370 RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH-----RFFAGI 411 (446)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS-----GGGTTC
T ss_pred ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC-----ccccCC
Confidence 67899999999999999999999 99999998 899875
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=356.89 Aligned_cols=250 Identities=14% Similarity=0.180 Sum_probs=215.9
Q ss_pred CCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceE
Q psy3914 48 RDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTF 122 (852)
Q Consensus 48 r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~ 122 (852)
..+.....|++.+.|| .|+||.||.|+++.+|+.|+||++.+ ......+.+|+++|+.++||||+++
T Consensus 179 ~~~~~~~~f~~~~~LG--------~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l 250 (543)
T 3c4z_A 179 AQPMGEDWFLDFRVLG--------RGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250 (543)
T ss_dssp TSCCCGGGEEEEEEEE--------ECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred cccCChhheEEEEEEe--------eCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeE
Confidence 3445566799999999 99999999999999999999999976 3456778999999999999999999
Q ss_pred eeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc
Q psy3914 123 LDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE 200 (852)
Q Consensus 123 ~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~ 200 (852)
++++++. ..+||||||+. +|..++.........+++..+..++.||+.||.||| +.||+||||||+||+++.+|.
T Consensus 251 ~~~~~~~--~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH-~~gIvHrDLKP~NILl~~~g~ 327 (543)
T 3c4z_A 251 AYAFETK--TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH-QRNIIYRDLKPENVLLDDDGN 327 (543)
T ss_dssp EEEEECS--SEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTSC
T ss_pred EEEEeeC--CEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH-HcCCcccCCChHHEEEeCCCC
Confidence 9999987 89999999998 799998654334567999999999999999999999 899999999999999999999
Q ss_pred EEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc---------
Q psy3914 201 WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------- 271 (852)
Q Consensus 201 ~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------- 271 (852)
+||+|||++..+.... .......||+.|+|||++.+..++.++|+|||||++|||++|..||.+...
T Consensus 328 vkL~DFGla~~~~~~~----~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~ 403 (543)
T 3c4z_A 328 VRISDLGLAVELKAGQ----TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403 (543)
T ss_dssp EEECCCTTCEECCTTC----CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHH
T ss_pred EEEeecceeeeccCCC----cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHH
Confidence 9999999997543221 112245789999999999888899999999999999999999999965421
Q ss_pred ------ccCcCCCChhHHHHHHHhccCCCCCCCCH-----HHHHHhhcCCCCCCcch
Q psy3914 272 ------LSNIDNIPENLKRVYLELISERPNQRPNP-----ADFIMRNRKPGGYFKND 317 (852)
Q Consensus 272 ------l~~~~~ip~~L~~li~~lL~~nP~~Rps~-----~elL~~l~~~~~fF~n~ 317 (852)
...+..+++.+.++|++||..||.+||++ .++++| +||++.
T Consensus 404 ~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H-----pff~~i 455 (543)
T 3c4z_A 404 RVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH-----PLFRDI 455 (543)
T ss_dssp HHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS-----GGGTTC
T ss_pred HHhhcccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC-----ccccCC
Confidence 12346789999999999999999999964 788887 899764
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-37 Score=338.66 Aligned_cols=240 Identities=16% Similarity=0.191 Sum_probs=193.6
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
...|++.+.|| .|++|+||+|+++.+++.|+||++......+.+.+|+.+|+.++||||+++++++++. .
T Consensus 52 ~~~y~~~~~lG--------~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~ 121 (349)
T 2w4o_A 52 SDFFEVESELG--------RGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETP--T 121 (349)
T ss_dssp GGTEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECS--S
T ss_pred cCcEEEeeEEe--------eCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecC--C
Confidence 34599999999 9999999999999999999999998855566788999999999999999999999987 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc---CCcEEEcccc
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS---CGEWKLGGLE 207 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~---~g~~KL~DFg 207 (852)
.+|+||||+. +|.+++. ..+.+++..+..++.||+.||.||| +.+++||||||+||+++. ++.+||+|||
T Consensus 122 ~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg 196 (349)
T 2w4o_A 122 EISLVLELVTGGELFDRIV----EKGYYSERDAADAVKQILEAVAYLH-ENGIVHRDLKPENLLYATPAPDAPLKIADFG 196 (349)
T ss_dssp EEEEEECCCCSCBHHHHHT----TCSSCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEESSSSTTCCEEECCCC
T ss_pred eEEEEEEeCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCCcccEEEecCCCCCCEEEccCc
Confidence 9999999997 7988883 2356899999999999999999999 899999999999999976 8899999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------- 272 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------- 272 (852)
++...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 197 ~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~ 271 (349)
T 2w4o_A 197 LSKIVEHQ-----VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFI 271 (349)
T ss_dssp ---------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCC
T ss_pred cccccCcc-----cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccC
Confidence 98754321 1122456889999999998888999999999999999999999998543221
Q ss_pred -cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 -SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 -~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....++..+.+++++||..||.+||++.++++| +||...
T Consensus 272 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h-----p~~~~~ 312 (349)
T 2w4o_A 272 SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH-----PWVTGK 312 (349)
T ss_dssp TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS-----TTTTST
T ss_pred CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC-----cccCCC
Confidence 1125688999999999999999999999999998 898653
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-37 Score=343.60 Aligned_cols=244 Identities=17% Similarity=0.236 Sum_probs=204.4
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcC--
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESP-- 129 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~-- 129 (852)
...+|++++.|| .|++|+||+|+++.+|+.||||++.... ....+|+++|+.++||||+++++++...
T Consensus 5 ~~~~y~~~~~lG--------~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 74 (383)
T 3eb0_A 5 SSKKYSLGKTLG--------TGSFGIVCEVFDIESGKRFALKKVLQDP--RYKNRELDIMKVLDHVNIIKLVDYFYTTGD 74 (383)
T ss_dssp -CTTEEEEEEEE--------CC-CEEEEEEEETTTCCEEEEEEEECCT--TSCCHHHHHHTTCCCTTBCCEEEEEEEC--
T ss_pred ccceEEEEEEEE--------eccCEEEEEEEECCCCCEEEEEEEecCc--chHHHHHHHHHHcCCCCccchhheeeecCc
Confidence 345799999999 9999999999999999999999987622 2235799999999999999999998542
Q ss_pred ----------------------------------CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHH
Q psy3914 130 ----------------------------------SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRAL 174 (852)
Q Consensus 130 ----------------------------------~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL 174 (852)
...++|+||||+. +|.+.+.........+++..++.+++||+.||
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL 154 (383)
T 3eb0_A 75 EEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV 154 (383)
T ss_dssp -----------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 1246999999999 78888876666678899999999999999999
Q ss_pred HHHHhcCCceecccCCCCEEEc-cCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhH
Q psy3914 175 SFLINDADLRHNHVNHTSIFIN-SCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGL 252 (852)
Q Consensus 175 ~fLH~~~~ivH~DIkp~NIlV~-~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSL 252 (852)
.||| +.|++||||||+||+++ .+|.+||+|||++...... .......+|+.|+|||++.+ ..++.++|||||
T Consensus 155 ~~LH-~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 228 (383)
T 3eb0_A 155 GFIH-SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS-----EPSVAYICSRFYRAPELMLGATEYTPSIDLWSI 228 (383)
T ss_dssp HHHH-TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT-----SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHH
T ss_pred HHHH-HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC-----CCCcCcccCCCccCHHHhcCCCCCCcchhhhhH
Confidence 9999 99999999999999998 5899999999998754321 11224567889999999854 458999999999
Q ss_pred HHHHHHHHhCCCCCCCCcccc----------------------------------------CcCCCChhHHHHHHHhccC
Q psy3914 253 GILIWEVFNGPLQSTNRKSLS----------------------------------------NIDNIPENLKRVYLELISE 292 (852)
Q Consensus 253 G~ll~el~tG~~pf~~~~~l~----------------------------------------~~~~ip~~L~~li~~lL~~ 292 (852)
||++|+|++|..||.+..... ....+|+.+.+++.+||..
T Consensus 229 G~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 308 (383)
T 3eb0_A 229 GCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRY 308 (383)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccC
Confidence 999999999999997543211 1235788899999999999
Q ss_pred CCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 293 RPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 293 nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
||.+|||+.++++| +||++
T Consensus 309 dP~~R~t~~e~l~h-----p~f~~ 327 (383)
T 3eb0_A 309 EPDLRINPYEAMAH-----PFFDH 327 (383)
T ss_dssp SGGGSCCHHHHHTS-----GGGHH
T ss_pred ChhhCCCHHHHhcC-----HHHHH
Confidence 99999999999998 88864
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=330.44 Aligned_cols=246 Identities=14% Similarity=0.205 Sum_probs=200.8
Q ss_pred CCCCeeEe-ccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhC-CCCCcceEeeeEE
Q psy3914 52 KDFAYEVG-EPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTL-RHPSILTFLDSVE 127 (852)
Q Consensus 52 ~~~~Y~i~-e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e 127 (852)
+...|++. +.|| .|++|+||+|+++.+++.|+||++.. ......+.+|+.+|+++ +||||++++++++
T Consensus 10 ~~~~y~i~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~ 81 (316)
T 2ac3_A 10 FEDVYQLQEDVLG--------EGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFE 81 (316)
T ss_dssp TTTSCEECCCCCC--------CCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred cceeEEecCceec--------CCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 45679995 7899 99999999999999999999999987 34567889999999985 7999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc---EE
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE---WK 202 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~---~K 202 (852)
+. +.+|+||||+. +|.+++... ..+++..+..++.||+.||.||| +.+++||||||+||+++.++. +|
T Consensus 82 ~~--~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~dlkp~Nil~~~~~~~~~~k 154 (316)
T 2ac3_A 82 EE--DRFYLVFEKMRGGSILSHIHKR----RHFNELEASVVVQDVASALDFLH-NKGIAHRDLKPENILCEHPNQVSPVK 154 (316)
T ss_dssp ET--TEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEESCSSSSCSEE
T ss_pred eC--CEEEEEEEcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH-hCCceeCCCCHHHEEEccCCCcCceE
Confidence 88 89999999997 799988532 57899999999999999999999 899999999999999998776 99
Q ss_pred EcccchhhccccccC---CCCcccccccCCCcccCCccccC-----CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-
Q psy3914 203 LGGLEYMEKISEASC---IPMKRYSRYEDQSTYQIPENSLS-----HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS- 273 (852)
Q Consensus 203 L~DFg~a~~~~~~~~---~~~~~~~~~~gt~~Y~APE~~~~-----~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~- 273 (852)
|+|||++........ ..........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.....
T Consensus 155 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~ 234 (316)
T 2ac3_A 155 ICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC 234 (316)
T ss_dssp ECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCS
T ss_pred EEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccc
Confidence 999999875432111 01111223468999999999843 457789999999999999999999996542110
Q ss_pred -----------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 274 -----------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 274 -----------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
....+++.+.+++++||..||.+||++.++++| +||++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h-----p~~~~~ 302 (316)
T 2ac3_A 235 GWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH-----PWVQGC 302 (316)
T ss_dssp CC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS-----TTCC--
T ss_pred cccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC-----hhhcCC
Confidence 014678899999999999999999999999998 999763
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=325.11 Aligned_cols=240 Identities=15% Similarity=0.242 Sum_probs=206.0
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
+..+|++.+.|| .|++|.||.|.++.+|+.|+||++... .....+.+|+.+++.++||||+++++++.
T Consensus 4 ~~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 75 (284)
T 3kk8_A 4 FSDNYDVKEELG--------KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 75 (284)
T ss_dssp TTTTEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhhhhhhhc--------CcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE
Confidence 456799999999 999999999999999999999999762 23456789999999999999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc---EE
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE---WK 202 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~---~K 202 (852)
+. ...|+||||+. +|.+.+... ..+++..+..++.||+.||.||| +.+++||||||+||+++.++. +|
T Consensus 76 ~~--~~~~~v~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dikp~Nil~~~~~~~~~~k 148 (284)
T 3kk8_A 76 EE--SFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCH-SNGIVHRNLKPENLLLASKAKGAAVK 148 (284)
T ss_dssp CS--SEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEESSSSTTCCEE
T ss_pred cC--CEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH-HCCcCcCCCCHHHEEEecCCCCCcEE
Confidence 87 89999999997 688777432 56899999999999999999999 899999999999999987665 99
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------- 272 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------- 272 (852)
|+|||++...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 149 l~Dfg~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~ 223 (284)
T 3kk8_A 149 LADFGLAIEVNDS-----EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 223 (284)
T ss_dssp ECCCTTCEECCSS-----CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred EeeceeeEEcccC-----ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcc
Confidence 9999998754321 1122456888999999998888899999999999999999999999544221
Q ss_pred -----cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 -----SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 -----~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....+++.+.+++.+||..||.+||++.++++| +||.+
T Consensus 224 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h-----~~~~~ 267 (284)
T 3kk8_A 224 YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV-----PWICN 267 (284)
T ss_dssp CCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS-----HHHHS
T ss_pred ccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC-----ccccC
Confidence 1225789999999999999999999999999997 67654
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-37 Score=338.20 Aligned_cols=240 Identities=15% Similarity=0.200 Sum_probs=206.7
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC----------chHHHHHHHHHHHhCCCCCcceE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD----------TYEPALSYVKKLKTLRHPSILTF 122 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~----------~~~~~~~E~~~Lk~LrHPnIlk~ 122 (852)
..+|++.+.|| .|++|+||+|+++.+|+.|+||++.... ....+.+|+.+|+.++||||+++
T Consensus 23 ~~~y~~~~~lG--------~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~ 94 (335)
T 3dls_A 23 SQKYSTMSPLG--------SGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKV 94 (335)
T ss_dssp HHHEEEEEECS--------SSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCE
T ss_pred ccceEEEeEEE--------ecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeE
Confidence 34699999999 9999999999999999999999998722 33457789999999999999999
Q ss_pred eeeEEcCCCCeEEEEEeecc---cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC
Q psy3914 123 LDSVESPSKSLVYLAVEYVE---PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG 199 (852)
Q Consensus 123 ~d~~e~~~~~~~yIVtE~v~---~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g 199 (852)
++++++. +.+|+||||+. +|..++. ....+++..+..++.||+.||.||| ..+++||||||+||+++.+|
T Consensus 95 ~~~~~~~--~~~~lv~e~~~~g~~l~~~~~----~~~~l~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dlkp~NIll~~~~ 167 (335)
T 3dls_A 95 LDIFENQ--GFFQLVMEKHGSGLDLFAFID----RHPRLDEPLASYIFRQLVSAVGYLR-LKDIIHRDIKDENIVIAEDF 167 (335)
T ss_dssp EEEEECS--SEEEEEEECCTTSCBHHHHHH----TCCCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTS
T ss_pred EEEEeeC--CEEEEEEEeCCCCccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH-hCCeEEeccCHHHEEEcCCC
Confidence 9999987 89999999986 6887773 3357999999999999999999999 89999999999999999999
Q ss_pred cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCC-CcchhHHhHHHHHHHHHhCCCCCCCCcc-----cc
Q psy3914 200 EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRKS-----LS 273 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~-~~~sDIwSLG~ll~el~tG~~pf~~~~~-----l~ 273 (852)
.+||+|||++...... .......||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+... ..
T Consensus 168 ~~kL~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~ 242 (335)
T 3dls_A 168 TIKLIDFGSAAYLERG-----KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIH 242 (335)
T ss_dssp CEEECCCTTCEECCTT-----CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTTCCC
T ss_pred cEEEeecccceECCCC-----CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhhccC
Confidence 9999999998754321 11224568999999999966655 7889999999999999999999964322 22
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
....+++.+.+++.+||..||.+||++.++++| +||.+.
T Consensus 243 ~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h-----p~~~~~ 281 (335)
T 3dls_A 243 PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD-----PWVTQP 281 (335)
T ss_dssp CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC-----TTTTCC
T ss_pred CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC-----ccccCC
Confidence 345689999999999999999999999999998 898764
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=345.17 Aligned_cols=237 Identities=16% Similarity=0.225 Sum_probs=197.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|++|.||.|+++.+|+.|+||++... .....+.+|+++|+.++||||+++++++...
T Consensus 25 ~~y~~~~~lG--------~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 96 (367)
T 1cm8_A 25 AVYRDLQPVG--------SGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPD 96 (367)
T ss_dssp SSEEEEEEC--------------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSC
T ss_pred ceEEEeEEee--------ecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecC
Confidence 4599999999 999999999999999999999999652 2245678999999999999999999999765
Q ss_pred C----CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 130 S----KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 130 ~----~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
. ...+|+||||+. +|.+++.. ..+++..+..+++||+.||.||| +.|++||||||+||+++.+|.+||+
T Consensus 97 ~~~~~~~~~~lv~e~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH-~~~ivH~Dlkp~NIll~~~~~~kl~ 170 (367)
T 1cm8_A 97 ETLDDFTDFYLVMPFMGTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIH-AAGIIHRDLKPGNLAVNEDCELKIL 170 (367)
T ss_dssp SSTTTCCCCEEEEECCSEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEEC
T ss_pred CccccCceEEEEEecCCCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH-HCCccccCcCHHHEEEcCCCCEEEE
Confidence 1 135799999998 79988843 56899999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc----------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---------- 273 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---------- 273 (852)
|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.....
T Consensus 171 Dfg~a~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g 243 (367)
T 1cm8_A 171 DFGLARQADS-------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTG 243 (367)
T ss_dssp CCTTCEECCS-------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred eeeccccccc-------ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 9999875432 1224567889999999854 678999999999999999999999996543211
Q ss_pred --------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 --------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 --------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++.+||..||.+|||+.++++| +||++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h-----p~f~~ 313 (367)
T 1cm8_A 244 TPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH-----PYFES 313 (367)
T ss_dssp CCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS-----GGGTT
T ss_pred CCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC-----hHHHh
Confidence 124568899999999999999999999999998 88865
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=328.59 Aligned_cols=238 Identities=19% Similarity=0.206 Sum_probs=199.7
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
..+|++.+.|| .|++|.||+|++..++..|+||++.. ......+.+|+.+++.++||||++++++++
T Consensus 10 ~~~y~i~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~ 81 (294)
T 4eqm_A 10 NERYKIVDKLG--------GGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE 81 (294)
T ss_dssp ETTEEEEEEEE--------EETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE
T ss_pred hccEEEEEEEc--------cCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeee
Confidence 45799999999 99999999999999999999999865 123457889999999999999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
+. +.+|+||||+. +|.+++... +.+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|
T Consensus 82 ~~--~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~Dlkp~Nil~~~~~~~kl~D 154 (294)
T 4eqm_A 82 ED--DCYYLVMEYIEGPTLSEYIESH----GPLSVDTAINFTNQILDGIKHAH-DMRIVHRDIKPQNILIDSNKTLKIFD 154 (294)
T ss_dssp CS--SEEEEEEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTSCEEECC
T ss_pred eC--CeEEEEEeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEECCCCCEEEEe
Confidence 87 89999999997 799988532 57899999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-------------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------- 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------- 272 (852)
||++....... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 155 fg~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~ 231 (294)
T 4eqm_A 155 FGIAKALSETS---LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN 231 (294)
T ss_dssp CSSSTTC----------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCC
T ss_pred CCCcccccccc---ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCC
Confidence 99987543321 11223456899999999998888899999999999999999999999654321
Q ss_pred ---cCcCCCChhHHHHHHHhccCCCCCCC-CHHHHHHhhc
Q psy3914 273 ---SNIDNIPENLKRVYLELISERPNQRP-NPADFIMRNR 308 (852)
Q Consensus 273 ---~~~~~ip~~L~~li~~lL~~nP~~Rp-s~~elL~~l~ 308 (852)
.....+|+.+.+++.+||..||.+|| ++.++.+.+.
T Consensus 232 ~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~ 271 (294)
T 4eqm_A 232 VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLS 271 (294)
T ss_dssp HHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred cchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence 12357899999999999999999999 7777766543
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-37 Score=338.82 Aligned_cols=247 Identities=13% Similarity=0.185 Sum_probs=201.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-------CCchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-------ADTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-------~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
.+|++++.|| .|++|.||.|+++.++..|+||++.. ....+.+.+|+++++.++||||+++++++
T Consensus 26 ~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 97 (345)
T 3hko_A 26 KKYHLKGAIG--------QGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVY 97 (345)
T ss_dssp HHEEEEEEEE--------ECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hheeecceee--------ecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhh
Confidence 3599999999 99999999999999999999999975 24457889999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhc------------------------------------CCCCCHHHHHHHHH
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKE------------------------------------NNEKKQIYISWGIF 168 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~------------------------------------~~~l~e~~i~~~l~ 168 (852)
++. ..+|+||||+. +|.+++...... ...+++..+..++.
T Consensus 98 ~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 175 (345)
T 3hko_A 98 EDE--QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR 175 (345)
T ss_dssp ECS--SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHH
T ss_pred ccC--CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHH
Confidence 987 89999999997 798887321100 11236778889999
Q ss_pred HHHHHHHHHHhcCCceecccCCCCEEEccCC--cEEEcccchhhccccccCCCCcccccccCCCcccCCccccC--CCCC
Q psy3914 169 QITRALSFLINDADLRHNHVNHTSIFINSCG--EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS--HVTK 244 (852)
Q Consensus 169 QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g--~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~--~~~~ 244 (852)
||+.||.||| +.+++||||||+||+++.++ .+||+|||++..+...............||+.|+|||++.+ ..++
T Consensus 176 qi~~~l~~LH-~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 254 (345)
T 3hko_A 176 QIFSALHYLH-NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYG 254 (345)
T ss_dssp HHHHHHHHHH-HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCC
T ss_pred HHHHHHHHHH-HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCC
Confidence 9999999999 89999999999999998776 89999999987554322222223345678999999999843 6788
Q ss_pred cchhHHhHHHHHHHHHhCCCCCCCCccc---------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcC
Q psy3914 245 CSTDMYGLGILIWEVFNGPLQSTNRKSL---------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRK 309 (852)
Q Consensus 245 ~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~ 309 (852)
.++|||||||++|+|++|..||.+.... .....+++.+.+++.+||..||.+||++.++++|
T Consensus 255 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h--- 331 (345)
T 3hko_A 255 PKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH--- 331 (345)
T ss_dssp THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS---
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC---
Confidence 9999999999999999999999654221 1123478999999999999999999999999997
Q ss_pred CCCCCcc
Q psy3914 310 PGGYFKN 316 (852)
Q Consensus 310 ~~~fF~n 316 (852)
+||++
T Consensus 332 --p~~~~ 336 (345)
T 3hko_A 332 --PWISQ 336 (345)
T ss_dssp --HHHHT
T ss_pred --hhhcc
Confidence 67654
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=323.61 Aligned_cols=236 Identities=16% Similarity=0.220 Sum_probs=206.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.+|++++.|| .|++|.||.|++..++..|+||++.. ......+.+|+.+++.++||||+++++++.+
T Consensus 14 ~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 85 (284)
T 2vgo_A 14 DDFDIGRPLG--------KGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD 85 (284)
T ss_dssp GGEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred hhceeeheec--------CCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc
Confidence 4699999999 99999999999999999999999975 3445678999999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. +.+|+||||+. +|.+++... +.+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.+||+||
T Consensus 86 ~--~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~kl~Df 158 (284)
T 2vgo_A 86 R--KRIYLMLEFAPRGELYKELQKH----GRFDEQRSATFMEELADALHYCH-ERKVIHRDIKPENLLMGYKGELKIADF 158 (284)
T ss_dssp S--SEEEEEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH-TTTEECCCCSGGGEEECTTCCEEECCC
T ss_pred C--CEEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH-HCCceecCCCHHHEEEcCCCCEEEecc
Confidence 7 89999999997 798888532 56899999999999999999999 999999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNI 275 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~ 275 (852)
|++...... ......|++.|+|||++.+..++.++|||||||++|+|++|..||.+... ....
T Consensus 159 g~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 232 (284)
T 2vgo_A 159 GWSVHAPSL------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP 232 (284)
T ss_dssp TTCEECSSS------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC
T ss_pred cccccCccc------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCC
Confidence 998643221 12245688899999999888889999999999999999999999965322 2234
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
..++..+.+++.+||..||.+||++.++++| +||+
T Consensus 233 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h-----~~~~ 267 (284)
T 2vgo_A 233 PFLSDGSKDLISKLLRYHPPQRLPLKGVMEH-----PWVK 267 (284)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC-----HHHH
T ss_pred CcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC-----HHHH
Confidence 6788999999999999999999999999997 6664
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=331.33 Aligned_cols=241 Identities=11% Similarity=0.177 Sum_probs=202.0
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
...+|++++.|| .|++|+||+|+++.+|+.|+||++.. ....+.+.+|+++|+.++||||+++++++..
T Consensus 7 ~~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 78 (319)
T 4euu_A 7 SNHLWLLSDILG--------QGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE 78 (319)
T ss_dssp SSEEEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CCCCEEEEEEec--------CCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeec
Confidence 456799999999 99999999999999999999999986 3456778899999999999999999999987
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE----ccCCcEE
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI----NSCGEWK 202 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV----~~~g~~K 202 (852)
.....+||||||+. +|.+++.. ......+++..+..++.||+.||.||| +.+++||||||+||++ +..+.+|
T Consensus 79 ~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dlkp~NIll~~~~~~~~~~k 156 (319)
T 4euu_A 79 TTTRHKVLIMEFCPCGSLYTVLEE-PSNAYGLPESEFLIVLRDVVGGMNHLR-ENGIVHRNIKPGNIMRVIGEDGQSVYK 156 (319)
T ss_dssp TTTCCEEEEEECCTTCBHHHHHHS-GGGTTCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEEECTTSCEEEE
T ss_pred CCCceEEEEEeCCCCCCHHHHHHH-hccccCCCHHHHHHHHHHHHHHHHHHH-HCCEecCCCCHHHEEEeccCCCCceEE
Confidence 64458999999997 79999953 233345899999999999999999999 8999999999999999 7788899
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCcccc--------CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL--------SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS- 273 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~--------~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~- 273 (852)
|+|||++....... ......||+.|+|||++. +..++.++|||||||++|||++|..||.......
T Consensus 157 L~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~ 231 (319)
T 4euu_A 157 LTDFGAARELEDDE-----QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR 231 (319)
T ss_dssp ECCCTTCEECCTTC-----CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG
T ss_pred EccCCCceecCCCC-----ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch
Confidence 99999987543321 122456889999999974 5778899999999999999999999984321100
Q ss_pred ---------------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 274 ---------------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 274 ---------------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
....+++.+.+++++||..||.+||++.++++|.
T Consensus 232 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 232 NKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp CHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred hHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 0012345788999999999999999999999984
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=322.32 Aligned_cols=240 Identities=15% Similarity=0.185 Sum_probs=201.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhC-CCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTL-RHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~ 128 (852)
.+|++.+.|| .|++++||.|+++.+++.|+||++.. ......+.+|+..+..+ +||||+++++++.+
T Consensus 11 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~ 82 (289)
T 1x8b_A 11 TEFHELEKIG--------SGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE 82 (289)
T ss_dssp HHEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE
T ss_pred chhhhhhhhc--------CCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec
Confidence 4599999999 99999999999999999999999986 22345678899999999 89999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC-------
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG------- 199 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g------- 199 (852)
. +.+|+||||+. +|.+++.........+++..+..++.||+.||.||| +.+++||||||+||+++.+|
T Consensus 83 ~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH-~~~ivH~Dikp~NIl~~~~~~~~~~~~ 159 (289)
T 1x8b_A 83 D--DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH-SMSLVHMDIKPSNIFISRTSIPNAASE 159 (289)
T ss_dssp T--TEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEC----------
T ss_pred C--CeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH-hCCEeecCCCHHHEEEcCCCCCccccc
Confidence 8 89999999997 899999765555577999999999999999999999 89999999999999998544
Q ss_pred ------------cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCC-CCCcchhHHhHHHHHHHHHhCCCCC
Q psy3914 200 ------------EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSH-VTKCSTDMYGLGILIWEVFNGPLQS 266 (852)
Q Consensus 200 ------------~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~~~~sDIwSLG~ll~el~tG~~pf 266 (852)
.+||+|||++...... ....||+.|+|||++.+. .++.++|||||||++|+|++|..++
T Consensus 160 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~ 231 (289)
T 1x8b_A 160 EGDEDDWASNKVMFKIGDLGHVTRISSP--------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLP 231 (289)
T ss_dssp ----------CCCEEECCCTTCEETTCS--------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred ccccccccCCceEEEEcccccccccCCc--------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCC
Confidence 7999999998754321 123478899999998544 5667999999999999999998776
Q ss_pred CCCcc---------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 267 TNRKS---------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 267 ~~~~~---------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
..... ......+++.+.+++.+||..||.+||++.++++| +||.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h-----~~~~~~ 286 (289)
T 1x8b_A 232 RNGDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH-----SVLLSA 286 (289)
T ss_dssp SSSHHHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC-----TTC---
T ss_pred cchhHHHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC-----hHhhhh
Confidence 43321 12345788999999999999999999999999998 899764
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-37 Score=340.20 Aligned_cols=241 Identities=18% Similarity=0.232 Sum_probs=199.7
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-------CchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-------DTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-------~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
..+|++++.|| .|++|.||.|+++.+|+.|+||++... .....+.+|+++++.++||||++++++
T Consensus 9 ~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 80 (346)
T 1ua2_A 9 AKRYEKLDFLG--------EGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDA 80 (346)
T ss_dssp ----CEEEEEE--------EETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred hcccEEEeEEe--------ecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEE
Confidence 34699999999 999999999999999999999998751 123467899999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 126 VESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
+.+. ..+|+||||+. +|..++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+
T Consensus 81 ~~~~--~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~Dlkp~Nil~~~~~~~kl~ 154 (346)
T 1ua2_A 81 FGHK--SNISLVFDFMETDLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLH-QHWILHRDLKPNNLLLDENGVLKLA 154 (346)
T ss_dssp ECCT--TCCEEEEECCSEEHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred EeeC--CceEEEEEcCCCCHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHH-HCCEECCCCCHHHEEEcCCCCEEEE
Confidence 9987 88999999999 78887732 2346888899999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc----------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---------- 273 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---------- 273 (852)
|||++..+... ........+|+.|+|||++. ...++.++|||||||++|+|++|..||.+.....
T Consensus 155 Dfg~a~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~ 230 (346)
T 1ua2_A 155 DFGLAKSFGSP----NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLG 230 (346)
T ss_dssp CCGGGSTTTSC----CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred ecccceeccCC----cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcC
Confidence 99998754322 12223456889999999984 4558899999999999999999999886532110
Q ss_pred -----------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 -----------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 -----------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.++|++||..||.+|||+.++++| +||.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h-----~~f~~ 297 (346)
T 1ua2_A 231 TPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM-----KYFSN 297 (346)
T ss_dssp CCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS-----GGGTS
T ss_pred CCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC-----hhhhc
Confidence 014557889999999999999999999999998 88865
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=327.92 Aligned_cols=241 Identities=13% Similarity=0.207 Sum_probs=205.7
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
...|++.+.|| .|++|.||.|.++.+|+.|+||++........+.+|+.+++.++||||+++++++... +
T Consensus 28 ~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~ 97 (314)
T 3com_A 28 EEVFDVLEKLG--------EGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN--T 97 (314)
T ss_dssp --CEEEEEECC------------CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEET--T
T ss_pred hhhhhhheeec--------cCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC--C
Confidence 45699999999 8999999999999999999999999866678899999999999999999999999987 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
.+|+||||+. +|.+++.. ....+++..+..++.||+.||.||| ..+++||||+|+||+++.+|.+||+|||++.
T Consensus 98 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 173 (314)
T 3com_A 98 DLWIVMEYCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLH-FMRKIHRDIKAGNILLNTEGHAKLADFGVAG 173 (314)
T ss_dssp EEEEEEECCTTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEeecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH-hCCCcCCCcCHHHEEECCCCCEEEeecccch
Confidence 9999999997 79988842 2367899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------ccCcC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------LSNID 276 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------l~~~~ 276 (852)
...... .......|++.|+|||++.+..++.++|||||||++|+|++|..||.+... .....
T Consensus 174 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
T 3com_A 174 QLTDTM----AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPE 249 (314)
T ss_dssp ECBTTB----SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGG
T ss_pred hhhhhc----cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcc
Confidence 543321 112245688899999999877889999999999999999999999964321 12234
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.+|..+.+++.+||..||..||++.++++| +||.+
T Consensus 250 ~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~-----~~~~~ 284 (314)
T 3com_A 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQH-----PFVRS 284 (314)
T ss_dssp GSCHHHHHHHHHHTCSCTTTSCCHHHHTTS-----HHHHT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHhC-----HHHhc
Confidence 578899999999999999999999999997 77754
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=340.77 Aligned_cols=242 Identities=17% Similarity=0.240 Sum_probs=199.8
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHH-HHhCCCCCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKK-LKTLRHPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~-Lk~LrHPnIlk~~d~ 125 (852)
...+|++.+.|| .|++|.||+|+++.+++.|+||++.+. .....+.+|..+ ++.++||||++++++
T Consensus 36 ~~~~y~~~~~lG--------~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~ 107 (373)
T 2r5t_A 36 KPSDFHFLKVIG--------KGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFS 107 (373)
T ss_dssp CGGGEEEEEEEE--------CCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEE
T ss_pred ChhheEEEEEEe--------eCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEE
Confidence 345699999999 999999999999999999999999872 233445566665 567899999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+++. +.+||||||+. +|..++.+ .+.+++..++.++.||+.||.||| +.||+||||||+||+++.+|.+||
T Consensus 108 ~~~~--~~~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH-~~givHrDlkp~NIll~~~g~ikL 180 (373)
T 2r5t_A 108 FQTA--DKLYFVLDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLH-SLNIVYRDLKPENILLDSQGHIVL 180 (373)
T ss_dssp EECS--SEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTSCEEE
T ss_pred EEeC--CEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCceecCCCHHHEEECCCCCEEE
Confidence 9988 89999999998 79888843 257899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------c
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------L 272 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l 272 (852)
+|||+++..... ........||+.|+|||++.+..++.++|+|||||++|||++|..||.+... .
T Consensus 181 ~DFG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~ 256 (373)
T 2r5t_A 181 TDFGLCKENIEH----NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL 256 (373)
T ss_dssp CCCCBCGGGBCC----CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCC
T ss_pred eeCccccccccC----CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc
Confidence 999998743221 1223356799999999999888899999999999999999999999965432 2
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCH----HHHHHhhcCCCCCCcch
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNP----ADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~----~elL~~l~~~~~fF~n~ 317 (852)
.....++..+.++|++||..||.+||++ .++++| +||++.
T Consensus 257 ~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h-----~~f~~~ 300 (373)
T 2r5t_A 257 QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH-----VFFSLI 300 (373)
T ss_dssp CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTS-----GGGTTC
T ss_pred CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCC-----ccccCC
Confidence 2346789999999999999999999987 466665 888764
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=351.45 Aligned_cols=239 Identities=17% Similarity=0.274 Sum_probs=207.9
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
..+|.+++.|| .|++|.||.|+++.+|+.|+||++.. ......+.+|+.+|+.++||||++++++++
T Consensus 15 ~~~Y~l~~~LG--------~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~ 86 (476)
T 2y94_A 15 IGHYILGDTLG--------VGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS 86 (476)
T ss_dssp ETTEEEEEEEE--------CCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred ecCEEEEEEEe--------eCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 35699999999 99999999999999999999999976 245568899999999999999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
+. +.+|+||||+. +|.+++. ..+.+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|
T Consensus 87 ~~--~~~~lv~E~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH-~~givHrDLkp~NIll~~~~~vkL~D 159 (476)
T 2y94_A 87 TP--SDIFMVMEYVSGGELFDYIC----KNGRLDEKESRRLFQQILSGVDYCH-RHMVVHRDLKPENVLLDAHMNAKIAD 159 (476)
T ss_dssp CS--SEEEEEEECCSSEEHHHHTT----SSSSCCHHHHHHHHHHHHHHHHHHH-TTTEECSCCSGGGEEECTTCCEEECC
T ss_pred EC--CEEEEEEeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH-HCCCCcccccHHHEEEecCCCeEEEe
Confidence 87 89999999996 7988883 3467999999999999999999999 99999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCC-CcchhHHhHHHHHHHHHhCCCCCCCCcc-----------cc
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LS 273 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~-~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~ 273 (852)
||++...... .......||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+... ..
T Consensus 160 FG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~ 234 (476)
T 2y94_A 160 FGLSNMMSDG-----EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFY 234 (476)
T ss_dssp CSSCEECCTT-----CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCC
T ss_pred ccchhhcccc-----ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcC
Confidence 9998754321 12234578999999999966554 6899999999999999999999965422 12
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.+..+++.+.+++++||..||.+|||+.++++| +||..
T Consensus 235 ~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h-----p~~~~ 272 (476)
T 2y94_A 235 TPQYLNPSVISLLKHMLQVDPMKRATIKDIREH-----EWFKQ 272 (476)
T ss_dssp CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC-----HHHHT
T ss_pred CCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC-----HHhhh
Confidence 345688999999999999999999999999997 67754
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=337.17 Aligned_cols=244 Identities=16% Similarity=0.216 Sum_probs=206.3
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
.+|++.+.|| .|++|.||.|++..++..|+||++... .....+.+|+++|+.++||||+++++++....
T Consensus 27 ~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 98 (364)
T 3qyz_A 27 PRYTNLSYIG--------EGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 98 (364)
T ss_dssp TTEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSS
T ss_pred ccEEEEEEee--------cCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCC
Confidence 4699999999 999999999999999999999999762 23356789999999999999999999987541
Q ss_pred ---CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 131 ---KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 131 ---~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
...+|+||||+. +|.+++.. ..+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+||
T Consensus 99 ~~~~~~~~iv~e~~~~~L~~~l~~-----~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dikp~NIl~~~~~~~kl~Df 172 (364)
T 3qyz_A 99 IEQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDF 172 (364)
T ss_dssp TTTCCCEEEEEECCSEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEECCC
T ss_pred ccccceEEEEEcccCcCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCChHhEEECCCCCEEEEeC
Confidence 146999999999 78888843 46899999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC-----------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN----------- 274 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~----------- 274 (852)
|++......... ........||+.|+|||++ ....++.++|||||||++|+|++|..||.+......
T Consensus 173 g~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 251 (364)
T 3qyz_A 173 GLARVADPDHDH-TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251 (364)
T ss_dssp TTCEECCGGGCB-CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSC
T ss_pred cceEecCCCCCc-cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCC
Confidence 998754432111 1122345789999999987 556688999999999999999999999965432211
Q ss_pred -------------------------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 275 -------------------------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 275 -------------------------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
...+++.+.+++.+||..||.+|||+.++++| +||++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h-----p~~~~~ 320 (364)
T 3qyz_A 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH-----PYLEQY 320 (364)
T ss_dssp CHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS-----GGGTTT
T ss_pred CHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC-----cchhhc
Confidence 14578899999999999999999999999998 888653
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=325.29 Aligned_cols=241 Identities=17% Similarity=0.232 Sum_probs=203.1
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
..+|++.+.|| .|++|.||+|+++.+|+.|+||++... ...+.+.+|+++++.++||||+++++++..
T Consensus 5 ~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 76 (279)
T 2w5a_A 5 AEDYEVLYTIG--------TGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID 76 (279)
T ss_dssp GGGEEEEEEEE--------ECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred hhheeeehhcc--------CCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEec
Confidence 34699999999 999999999999999999999999862 234568899999999999999999998754
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC-----ceecccCCCCEEEccCCcE
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDAD-----LRHNHVNHTSIFINSCGEW 201 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~-----ivH~DIkp~NIlV~~~g~~ 201 (852)
.....+|+||||+. +|.+++.........+++..+..++.||+.||.||| ..+ ++||||||+||+++.+|.+
T Consensus 77 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~~~~~~ivH~dl~p~NIl~~~~~~~ 155 (279)
T 2w5a_A 77 RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH-RRSDGGHTVLHRDLKPANVFLDGKQNV 155 (279)
T ss_dssp GGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-HHC------CCCCCSGGGEEECSSSCE
T ss_pred CCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh-cccCCCCeeEEeccchhhEEEcCCCCE
Confidence 33378999999997 799999655444566999999999999999999999 777 9999999999999999999
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------- 272 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------- 272 (852)
||+|||++....... .......+++.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 156 kl~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~ 231 (279)
T 2w5a_A 156 KLGDFGLARILNHDT----SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG 231 (279)
T ss_dssp EECCCCHHHHC---C----HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred EEecCchheeecccc----ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhc
Confidence 999999987543211 1122346788999999997778899999999999999999999999654221
Q ss_pred ---cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 273 ---SNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 273 ---~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.....+|..+.+++.+||+.||.+||++.+++++
T Consensus 232 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 268 (279)
T 2w5a_A 232 KFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 268 (279)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 2235678999999999999999999999999997
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=341.93 Aligned_cols=240 Identities=15% Similarity=0.225 Sum_probs=207.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC--chHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD--TYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~--~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
..|++.+.|| .|++|.||+|.++.+|+.|++|++.... ....+.+|+.+|+.|+||||+++++++++.
T Consensus 51 ~~y~i~~~LG--------~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-- 120 (387)
T 1kob_A 51 DYYDILEELG--------SGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK-- 120 (387)
T ss_dssp GTEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECS--
T ss_pred cceEEEEEEe--------cCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeC--
Confidence 3599999999 9999999999999999999999998732 345688999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc--CCcEEEcccc
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS--CGEWKLGGLE 207 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~--~g~~KL~DFg 207 (852)
..+|+||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++. .+.+||+|||
T Consensus 121 ~~~~lv~E~~~gg~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH-~~givHrDlkp~NIll~~~~~~~vkL~DFG 196 (387)
T 1kob_A 121 YEMVLILEFLSGGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMH-EHSIVHLDIKPENIMCETKKASSVKIIDFG 196 (387)
T ss_dssp SEEEEEEECCCCCBHHHHTTC---TTCCBCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred CEEEEEEEcCCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHH-hCCeeecccchHHeEEecCCCCceEEEecc
Confidence 89999999997 78888732 2346899999999999999999999 899999999999999974 5779999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------- 272 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------- 272 (852)
++...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 197 ~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 271 (387)
T 1kob_A 197 LATKLNPD-----EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE 271 (387)
T ss_dssp TCEECCTT-----SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCS
T ss_pred cceecCCC-----cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc
Confidence 98754321 1122356899999999998888999999999999999999999999654321
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....+++.+.++|++||..||.+||++.++++| +||++.
T Consensus 272 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h-----p~~~~~ 311 (387)
T 1kob_A 272 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH-----PWLKGD 311 (387)
T ss_dssp STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS-----TTTSSC
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC-----ccccCC
Confidence 1235789999999999999999999999999998 899754
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=334.72 Aligned_cols=237 Identities=15% Similarity=0.247 Sum_probs=185.6
Q ss_pred CeeEe---ccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCC-CCCcceEeeeEEcCC
Q psy3914 55 AYEVG---EPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLR-HPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~---e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~~ 130 (852)
+|++. +.|| .|++|+||+|.++.+|+.|+||++.. .......+|+.+++.++ ||||+++++++++.
T Consensus 9 ~y~~~~~~~~lG--------~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~- 78 (325)
T 3kn6_A 9 HYDLDLKDKPLG--------EGSFSICRKCVHKKSNQAFAVKIISK-RMEANTQKEITALKLCEGHPNIVKLHEVFHDQ- 78 (325)
T ss_dssp HEEECTTSCCSE--------EETTEEEEEEEETTTCCEEEEEEEEG-GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-
T ss_pred ccccccCCCccc--------cCCCeEEEEEEECCCCCEEEEEEECh-hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcC-
Confidence 47774 7899 99999999999999999999999986 34567889999999997 99999999999988
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC---cEEEcc
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG---EWKLGG 205 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g---~~KL~D 205 (852)
..+||||||+. +|.+++.. ...+++..+..++.||+.||.||| +.+++||||||+||+++.++ .+||+|
T Consensus 79 -~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH-~~~ivH~Dlkp~NIll~~~~~~~~~kl~D 152 (325)
T 3kn6_A 79 -LHTFLVMELLNGGELFERIKK----KKHFSETEASYIMRKLVSAVSHMH-DVGVVHRDLKPENLLFTDENDNLEIKIID 152 (325)
T ss_dssp -SEEEEEECCCCSCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEEEC----CEEEECC
T ss_pred -CEEEEEEEccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCHHHEEEecCCCcccEEEec
Confidence 89999999997 79888843 367999999999999999999999 89999999999999998766 799999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc------------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------ 273 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------ 273 (852)
||++...... ........+|+.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus 153 fg~a~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i 228 (325)
T 3kn6_A 153 FGFARLKPPD----NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI 228 (325)
T ss_dssp CTTCEECCC--------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHH
T ss_pred cccceecCCC----CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHH
Confidence 9998743321 112234567889999999988889999999999999999999999996432110
Q ss_pred ----------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 ----------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ----------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++++||..||.+||++.++++| +||++
T Consensus 229 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h-----~w~~~ 276 (325)
T 3kn6_A 229 KKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN-----EWLQD 276 (325)
T ss_dssp TTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC-----GGGCT
T ss_pred HcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC-----hhhcc
Confidence 013578999999999999999999999999997 78864
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-36 Score=322.33 Aligned_cols=242 Identities=12% Similarity=0.082 Sum_probs=207.9
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTL-RHPSILTFLDSVESPS 130 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~ 130 (852)
...+|++++.|| .|++|.||+|++..+|+.|+||++........+.+|++.++.+ +||||+++++++.+.
T Consensus 8 ~~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~- 78 (298)
T 1csn_A 8 VGVHYKVGRRIG--------EGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEG- 78 (298)
T ss_dssp ETTTEEEEEEEE--------ECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEET-
T ss_pred cccceEEEEEEe--------ecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCC-
Confidence 345699999999 9999999999999999999999998755556788999999999 799999999999987
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc-----EEEc
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE-----WKLG 204 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~-----~KL~ 204 (852)
...|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|. +||+
T Consensus 79 -~~~~lv~e~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~ 153 (298)
T 1csn_A 79 -LHNVLVIDLLGPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIH-EKSLVYRDIKPDNFLIGRPNSKNANMIYVV 153 (298)
T ss_dssp -TEEEEEEECCCCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHH-TTTEECCCCCGGGEEECCSSSTTTTCEEEC
T ss_pred -ceeEEEEEecCCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHH-hCCEecCCCCHHHEEeccCCCCCCCeEEEE
Confidence 89999999998 899998532 246899999999999999999999 999999999999999988776 9999
Q ss_pred ccchhhccccccCC---CCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc--------
Q psy3914 205 GLEYMEKISEASCI---PMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS-------- 273 (852)
Q Consensus 205 DFg~a~~~~~~~~~---~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~-------- 273 (852)
|||++......... +........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus 154 Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 233 (298)
T 1csn_A 154 DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI 233 (298)
T ss_dssp CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHH
T ss_pred ECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHH
Confidence 99999865432221 1122345678999999999988889999999999999999999999996532211
Q ss_pred -----------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 274 -----------NIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 274 -----------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
....+|+.+.+++.+||+.||.+||++.++++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l 278 (298)
T 1csn_A 234 GEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLF 278 (298)
T ss_dssp HHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHH
T ss_pred HhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHH
Confidence 1247899999999999999999999999998864
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=330.81 Aligned_cols=237 Identities=15% Similarity=0.245 Sum_probs=194.1
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC----chHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD----TYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~----~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
..+|++.+.|| .|++|+||+|+. +|..|+||++.... ....+.+|+++|++++||||+++++++.+
T Consensus 36 ~~~y~i~~~lG--------~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 105 (309)
T 3p86_A 36 WCDLNIKEKIG--------AGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ 105 (309)
T ss_dssp GGGEEEEEEEE--------ECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhHceeeeEee--------cCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE
Confidence 34699999999 999999999987 68899999997622 23467899999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC--ceecccCCCCEEEccCCcEEEc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDAD--LRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~--ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
. ..+|+||||+. +|.+++.+. .....+++..+..++.||+.||.||| +.+ ++||||||+||+++.+|.+||+
T Consensus 106 ~--~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~~~ivH~Dikp~NIll~~~~~~kL~ 181 (309)
T 3p86_A 106 P--PNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVC 181 (309)
T ss_dssp T--TCCEEEEECCTTCBHHHHHHST-THHHHSCHHHHHHHHHHHHHHHHHHH-TSSSCCCCTTCCGGGEEECTTCCEEEC
T ss_pred C--CceEEEEecCCCCcHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHH-cCCCCEECCCCChhhEEEeCCCcEEEC
Confidence 7 88999999997 799998532 11124889999999999999999999 889 9999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-------------c
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK-------------S 271 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~-------------~ 271 (852)
|||++...... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.. .
T Consensus 182 Dfg~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~ 257 (309)
T 3p86_A 182 DFGLSRLKAST----FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257 (309)
T ss_dssp CCC---------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCC
T ss_pred CCCCCcccccc----ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC
Confidence 99998743221 112234568899999999988888999999999999999999999996532 1
Q ss_pred ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+++.+.+++.+||..+|.+||++.++++.+
T Consensus 258 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L 293 (309)
T 3p86_A 258 LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293 (309)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 233467899999999999999999999999999864
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=330.33 Aligned_cols=239 Identities=16% Similarity=0.201 Sum_probs=196.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhC-CCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTL-RHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~ 128 (852)
.+|++.++|| .|++|+||+|+++.+|+.||||++... .......+|+..+..+ +||||+++++++++
T Consensus 57 ~~y~~~~~LG--------~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~ 128 (311)
T 3p1a_A 57 QSFQRLSRLG--------HGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE 128 (311)
T ss_dssp HHEEEEEEEE--------EETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred hheeeeheec--------cCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe
Confidence 3599999999 999999999999999999999998762 1122334444444444 89999999999998
Q ss_pred CCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 129 PSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 129 ~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
. +.+|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+|+||||||+||+++.+|.+||+|||
T Consensus 129 ~--~~~~lv~e~~~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dikp~NIll~~~~~~kl~DFG 202 (311)
T 3p1a_A 129 G--GILYLQTELCGPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLH-SQGLVHLDVKPANIFLGPRGRCKLGDFG 202 (311)
T ss_dssp T--TEEEEEEECCCCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECGGGCEEECCCT
T ss_pred C--CEEEEEEeccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH-HCCEecCCCCHHHEEECCCCCEEEccce
Confidence 7 99999999999 788887432 356999999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------cCcCC
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----------SNIDN 277 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----------~~~~~ 277 (852)
++....... ......||+.|+|||++.+ .++.++|||||||++|||++|..++.+.... .....
T Consensus 203 ~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (311)
T 3p1a_A 203 LLVELGTAG-----AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAG 276 (311)
T ss_dssp TCEECC-----------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTT
T ss_pred eeeecccCC-----CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccC
Confidence 987543211 1223468899999999865 6889999999999999999996555332211 12356
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
+++.+.+++.+||..||.+||++.++++| +||+++
T Consensus 277 ~~~~l~~li~~~L~~dP~~Rpt~~ell~h-----p~~~~p 311 (311)
T 3p1a_A 277 LSSELRSVLVMMLEPDPKLRATAEALLAL-----PVLRQP 311 (311)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHTS-----GGGSCC
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHhC-----ccccCC
Confidence 88999999999999999999999999997 898753
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-36 Score=321.06 Aligned_cols=238 Identities=12% Similarity=0.199 Sum_probs=205.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.+|++.+.|| .|++|.||.|+++.++..|++|++.. ....+.+.+|+++++.++||||+++++++.+.
T Consensus 9 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-- 78 (277)
T 3f3z_A 9 QYYTLENTIG--------RGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDN-- 78 (277)
T ss_dssp HHEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS--
T ss_pred hhEEeeeEEe--------ecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC--
Confidence 3599999999 99999999999999999999999987 45567899999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE---ccCCcEEEccc
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI---NSCGEWKLGGL 206 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV---~~~g~~KL~DF 206 (852)
..+|+||||+. +|.+++.. ...+++..+..++.||+.||.||| +.+++||||||+||++ +.++.+||+||
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~~~~~l~Df 153 (277)
T 3f3z_A 79 TDIYLVMELCTGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCH-KLNVAHRDLKPENFLFLTDSPDSPLKLIDF 153 (277)
T ss_dssp SEEEEEEECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred CeEEEEEeccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCccCCCCCHHHEEEecCCCCCcEEEEec
Confidence 89999999997 78888743 256899999999999999999999 8999999999999999 77899999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------- 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------- 273 (852)
|++...... .......+|+.|+|||++.+. ++.++|||||||++|+|++|..||.+.....
T Consensus 154 g~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 227 (277)
T 3f3z_A 154 GLAARFKPG-----KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFP 227 (277)
T ss_dssp TTCEECCTT-----SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred ccceeccCc-----cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 998754321 122345688999999998554 8889999999999999999999996543211
Q ss_pred --CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 274 --NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 274 --~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
....+++.+.+++++||..||.+||++.++++| +||++.
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h-----~~~~~~ 268 (277)
T 3f3z_A 228 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH-----EWFEKQ 268 (277)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS-----HHHHHH
T ss_pred chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC-----HHHhcc
Confidence 113689999999999999999999999999997 777553
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=336.25 Aligned_cols=239 Identities=17% Similarity=0.214 Sum_probs=202.6
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCC-----CCCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLR-----HPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~Lr-----HPnIlk~~d~ 125 (852)
...+|++.+.|| .|++|+||+|+++.+++.||||++.. ........+|+.+++.++ ||||++++++
T Consensus 33 ~~~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~ 104 (360)
T 3llt_A 33 LNNAFLVIRKMG--------DGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGK 104 (360)
T ss_dssp ETTTEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEE
T ss_pred ecCEEEEEEEEc--------ccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccce
Confidence 345799999999 99999999999999999999999976 334456788999999997 9999999999
Q ss_pred EEcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc-------
Q psy3914 126 VESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS------- 197 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~------- 197 (852)
+... ..+|+||||+. +|.+++... ....+++..+..++.||+.||.||| +.+|+||||||+||+++.
T Consensus 105 ~~~~--~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~~~~~~~ 179 (360)
T 3llt_A 105 FMYY--DHMCLIFEPLGPSLYEIITRN--NYNGFHIEDIKLYCIEILKALNYLR-KMSLTHTDLKPENILLDDPYFEKSL 179 (360)
T ss_dssp EEET--TEEEEEECCCCCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEESCTTCCEEE
T ss_pred eeEC--CeeEEEEcCCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeCCCCcccEEEccccccccc
Confidence 9988 89999999998 799998532 2245899999999999999999999 899999999999999975
Q ss_pred ------------------CCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHH
Q psy3914 198 ------------------CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEV 259 (852)
Q Consensus 198 ------------------~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el 259 (852)
++.+||+|||++..... ......||+.|+|||++.+..++.++|||||||++|+|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 252 (360)
T 3llt_A 180 ITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-------YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252 (360)
T ss_dssp EEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS-------CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred cchhcccccccccccccCCCCEEEEeccCceecCC-------CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHH
Confidence 78999999999874322 11245688999999999888899999999999999999
Q ss_pred HhCCCCCCCCccccC-------cC--------------------------------------------------CCChhH
Q psy3914 260 FNGPLQSTNRKSLSN-------ID--------------------------------------------------NIPENL 282 (852)
Q Consensus 260 ~tG~~pf~~~~~l~~-------~~--------------------------------------------------~ip~~L 282 (852)
++|..||.+...... .. ..++.+
T Consensus 253 l~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (360)
T 3llt_A 253 YTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELF 332 (360)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHH
T ss_pred HHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHH
Confidence 999999965322110 00 112667
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 283 KRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 283 ~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
.+++++||..||.+|||+.++++| +||+
T Consensus 333 ~~li~~~L~~dP~~Rpta~elL~h-----p~f~ 360 (360)
T 3llt_A 333 CDFLYSILQIDPTLRPSPAELLKH-----KFLE 360 (360)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTTS-----GGGC
T ss_pred HHHHHHHhcCChhhCCCHHHHhcC-----cccC
Confidence 799999999999999999999997 8885
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-36 Score=320.06 Aligned_cols=239 Identities=16% Similarity=0.293 Sum_probs=199.4
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.+|++++.|| .|+++.||.|+++.+|+.|+||++.. ......+.+|+..++.++||||+++++++.+
T Consensus 11 ~~y~i~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 82 (276)
T 2h6d_A 11 GHYVLGDTLG--------VGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST 82 (276)
T ss_dssp TTEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred ccEEEEeeec--------CCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec
Confidence 4699999999 99999999999999999999999976 3456688999999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. ..+|+||||+. +|.+++... ..+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.+||+||
T Consensus 83 ~--~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~~l~df 155 (276)
T 2h6d_A 83 P--TDFFMVMEYVSGGELFDYICKH----GRVEEMEARRLFQQILSAVDYCH-RHMVVHRDLKPENVLLDAHMNAKIADF 155 (276)
T ss_dssp S--SEEEEEEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH-HHCSSCCCCCGGGEEECTTSCEEECCC
T ss_pred C--CeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH-HCCCccCCCChhhEEECCCCCEEEeec
Confidence 7 89999999997 799988432 56899999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCC-CcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccC
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSN 274 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~-~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~ 274 (852)
|++...... .......+++.|+|||++.+..+ +.++|+|||||++|+|++|..||.+... ...
T Consensus 156 g~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 230 (276)
T 2h6d_A 156 GLSNMMSDG-----EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYI 230 (276)
T ss_dssp CGGGCCCC------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred ccccccCCC-----cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccC
Confidence 998754321 11223467889999999965554 6799999999999999999999965321 123
Q ss_pred cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 275 IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 275 ~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
...++..+.+++.+||+.||.+||++.++++| +||++.
T Consensus 231 ~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h-----~~~~~~ 268 (276)
T 2h6d_A 231 PEYLNRSVATLLMHMLQVDPLKRATIKDIREH-----EWFKQD 268 (276)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS-----HHHHTT
T ss_pred chhcCHHHHHHHHHHccCChhhCCCHHHHHhC-----hhhccC
Confidence 45678999999999999999999999999997 777553
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=326.04 Aligned_cols=242 Identities=15% Similarity=0.199 Sum_probs=208.5
Q ss_pred CCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 51 SKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 51 ~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
....+|++++.|| .|++|.||.|.++.+++.|++|++... ...+.+.+|+.+++.++||||++++++
T Consensus 12 ~~~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 83 (294)
T 2rku_A 12 RSRRRYVRGRFLG--------KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 83 (294)
T ss_dssp TTTEEEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred CcccceEEEEEEe--------ecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeee
Confidence 3556799999999 999999999999999999999999762 234578899999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+.+. +.+|+||||+. +|.+++.. ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||
T Consensus 84 ~~~~--~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~kl 156 (294)
T 2rku_A 84 FEDN--DFVFVVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLH-RNRVIHRDLKLGNLFLNEDLEVKI 156 (294)
T ss_dssp EECS--SEEEEEEECCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEE
T ss_pred eccC--CEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCChHhEEEcCCCCEEE
Confidence 9987 89999999998 68887743 257899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-----------cc
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK-----------SL 272 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~-----------~l 272 (852)
+|||++....... .......|++.|+|||++.+..++.++|+|||||++|+|++|..||.+.. ..
T Consensus 157 ~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~ 232 (294)
T 2rku_A 157 GDFGLATKVEYDG----ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 232 (294)
T ss_dssp CCCTTCEECCSTT----CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC
T ss_pred EeccCceecccCc----cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccC
Confidence 9999987543211 12234568889999999987888999999999999999999999996532 12
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....+++.+.+++.+||..||.+||++.++++| +||.+
T Consensus 233 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~-----~~~~~ 271 (294)
T 2rku_A 233 SIPKHINPVAASLIQKMLQTDPTARPTINELLND-----EFFTS 271 (294)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS-----HHHHT
T ss_pred CCccccCHHHHHHHHHHcccChhhCcCHHHHhhC-----hheec
Confidence 2346788999999999999999999999999997 66643
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=334.16 Aligned_cols=242 Identities=15% Similarity=0.199 Sum_probs=209.0
Q ss_pred CCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 51 SKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 51 ~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
....+|.+++.|| .|++|.||+|+++.+++.|++|++... ...+.+.+|+.+++.++||||++++++
T Consensus 38 ~~~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 109 (335)
T 2owb_A 38 RSRRRYVRGRFLG--------KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 109 (335)
T ss_dssp TTTEEEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccCCceEEEEEEe--------eCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 3456799999999 999999999999999999999999762 234678899999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+++. +.+|+||||+. +|.+++.. ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||
T Consensus 110 ~~~~--~~~~lv~e~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~dlkp~NIl~~~~~~~kl 182 (335)
T 2owb_A 110 FEDN--DFVFVVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLH-RNRVIHRDLKLGNLFLNEDLEVKI 182 (335)
T ss_dssp EECS--SEEEEEECCCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEECTTCCEEE
T ss_pred EecC--CeEEEEEecCCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH-HCCCEecCCCchhEEEcCCCCEEE
Confidence 9987 89999999998 78888743 257899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-----------cc
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK-----------SL 272 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~-----------~l 272 (852)
+|||++....... .......|++.|+|||++.+..++.++|||||||++|+|++|..||.+.. ..
T Consensus 183 ~Dfg~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 258 (335)
T 2owb_A 183 GDFGLATKVEYDG----ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 258 (335)
T ss_dssp CCCTTCEECCSTT----CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC
T ss_pred eeccCceecccCc----ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCC
Confidence 9999987543211 12234568889999999977788999999999999999999999996532 12
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....+++.+.+++++||..||.+||++.++++| +||.+
T Consensus 259 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~-----~~~~~ 297 (335)
T 2owb_A 259 SIPKHINPVAASLIQKMLQTDPTARPTINELLND-----EFFTS 297 (335)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS-----HHHHT
T ss_pred CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC-----ccccC
Confidence 2346788999999999999999999999999997 66644
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-37 Score=342.70 Aligned_cols=238 Identities=14% Similarity=0.170 Sum_probs=193.4
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|++|.||.|+++.+|+.|+||++... .....+.+|+.+++.++||||+++++++...
T Consensus 25 ~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 96 (371)
T 2xrw_A 25 KRYQNLKPIG--------SGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQ 96 (371)
T ss_dssp TTEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSC
T ss_pred hheeEeeeeE--------ecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccc
Confidence 4599999999 999999999999999999999999762 2335678999999999999999999999765
Q ss_pred C----CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 130 S----KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 130 ~----~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
. ...+||||||+. +|.+++. ..+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+
T Consensus 97 ~~~~~~~~~~lv~e~~~~~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH-~~~ivH~Dlkp~NIl~~~~~~~kl~ 169 (371)
T 2xrw_A 97 KSLEEFQDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSDCTLKIL 169 (371)
T ss_dssp CSTTTCCEEEEEEECCSEEHHHHHH------SCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTSCEEEC
T ss_pred cccccccceEEEEEcCCCCHHHHHh------hccCHHHHHHHHHHHHHHHHHHH-HCCeecccCCHHHEEEcCCCCEEEE
Confidence 1 137999999999 7888773 45889999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccCc---------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI--------- 275 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~~--------- 275 (852)
|||++...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+......+
T Consensus 170 Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~ 244 (371)
T 2xrw_A 170 DFGLARTAGTS-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 244 (371)
T ss_dssp CCCC---------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCC
T ss_pred Eeecccccccc-----cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 99998754321 1122456888999999998888999999999999999999999999654321100
Q ss_pred -----------------------C---------------------CCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCC
Q psy3914 276 -----------------------D---------------------NIPENLKRVYLELISERPNQRPNPADFIMRNRKPG 311 (852)
Q Consensus 276 -----------------------~---------------------~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~ 311 (852)
. .++..+.+++++||..||.+|||+.++++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h----- 319 (371)
T 2xrw_A 245 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH----- 319 (371)
T ss_dssp CCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS-----
T ss_pred CCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC-----
Confidence 0 014578999999999999999999999998
Q ss_pred CCCcc
Q psy3914 312 GYFKN 316 (852)
Q Consensus 312 ~fF~n 316 (852)
+||+.
T Consensus 320 p~~~~ 324 (371)
T 2xrw_A 320 PYINV 324 (371)
T ss_dssp HHHHT
T ss_pred cchhh
Confidence 77753
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-36 Score=329.97 Aligned_cols=240 Identities=14% Similarity=0.101 Sum_probs=205.5
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSK 131 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~~ 131 (852)
..+|++++.|| .|++|+||+|+++.+|+.|+||++........+.+|+++++.| +||||+++++++...
T Consensus 8 ~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~-- 77 (330)
T 2izr_A 8 GPNFRVGKKIG--------CGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCG-- 77 (330)
T ss_dssp TTTEEEEEECC--------C-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEET--
T ss_pred cCCeEEEEEee--------ccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecC--
Confidence 45699999999 9999999999999999999999998755556788999999999 899999999999987
Q ss_pred CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc-----EEEcc
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE-----WKLGG 205 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~-----~KL~D 205 (852)
...||||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|. +||+|
T Consensus 78 ~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH-~~~iiHrDlkp~Nill~~~~~~~~~~~kl~D 153 (330)
T 2izr_A 78 KYNAMVLELLGPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVH-SKNLIYRDVKPENFLIGRPGNKTQQVIHIID 153 (330)
T ss_dssp TEEEEEEECCCCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECCGGGTCTTSEEECC
T ss_pred CccEEEEEeCCCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccCCCHHHeeeccCCCCCCceEEEEE
Confidence 89999999998 799998532 367999999999999999999999 899999999999999999887 99999
Q ss_pred cchhhccccccC---CCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC--------
Q psy3914 206 LEYMEKISEASC---IPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN-------- 274 (852)
Q Consensus 206 Fg~a~~~~~~~~---~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~-------- 274 (852)
||++..+..... .+........||+.|+|||++.+..++.++|||||||++|||++|..||.+......
T Consensus 154 Fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~ 233 (330)
T 2izr_A 154 FALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIG 233 (330)
T ss_dssp CTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHH
T ss_pred cccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHH
Confidence 999986543221 112223457799999999999888899999999999999999999999965322110
Q ss_pred -----------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 275 -----------IDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 275 -----------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
...+| .+..++..||+.+|..||++.++++.+
T Consensus 234 ~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l 276 (330)
T 2izr_A 234 DTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLF 276 (330)
T ss_dssp HHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHH
T ss_pred hhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHH
Confidence 13456 999999999999999999999998753
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=325.83 Aligned_cols=244 Identities=12% Similarity=0.145 Sum_probs=195.2
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC----chHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD----TYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~----~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
..+|++.+.|| .|++|+||+|+++.+|+.|+||++.... ....+.++...++.++||||+++++++.+
T Consensus 6 ~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~ 77 (290)
T 3fme_A 6 ADDLEPIMELG--------RGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR 77 (290)
T ss_dssp GGGEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred HHhhhhHHhcC--------CCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec
Confidence 34699999999 9999999999999999999999997621 22334455556888899999999999998
Q ss_pred CCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 129 PSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 129 ~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
. +..|+||||+. +|.+++.........+++..+..++.||+.||.|||+.++++||||||+||+++.++.+||+|||
T Consensus 78 ~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T 3fme_A 78 E--GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG 155 (290)
T ss_dssp S--SSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-
T ss_pred c--CCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecC
Confidence 7 89999999999 78888866556667899999999999999999999933499999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccc----cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENS----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS------------ 271 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~----~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------------ 271 (852)
++....... ......||+.|+|||++ .+..++.++|||||||++|+|++|..||.+...
T Consensus 156 ~~~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 230 (290)
T 3fme_A 156 ISGYLVDDV-----AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP 230 (290)
T ss_dssp -------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSC
T ss_pred Ccccccccc-----cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccC
Confidence 987543321 11234688899999995 566788899999999999999999999954211
Q ss_pred --ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 272 --LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 272 --l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
......+++.+.+++.+||..||.+|||+.++++| +||+.
T Consensus 231 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h-----p~f~~ 272 (290)
T 3fme_A 231 SPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH-----PFFTL 272 (290)
T ss_dssp CCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS-----HHHHH
T ss_pred CCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC-----ccccc
Confidence 11124688999999999999999999999999997 78864
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-37 Score=347.31 Aligned_cols=244 Identities=15% Similarity=0.213 Sum_probs=202.3
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcC--
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESP-- 129 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~-- 129 (852)
....|++.+.|| .|+||.||+|+++.+|+.|+||++.... ....+|+++|+.|+||||+++++++...
T Consensus 52 ~~~~y~~~~~lG--------~G~fg~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~E~~il~~l~hpniv~l~~~~~~~~~ 121 (420)
T 1j1b_A 52 QEVSYTDTKVIG--------NGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQIMRKLDHCNIVRLRYFFYSSGE 121 (420)
T ss_dssp EEEEEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEECCT--TSCCHHHHHHHTCCCTTBCCEEEEEEEEET
T ss_pred ccceEEeeeEEe--------eCCCEEEEEEEECCCCcEEEEEEecccc--hhHHHHHHHHHHcCCCCccceeeEEeccCC
Confidence 345699999999 9999999999999999999999987622 2345799999999999999999988542
Q ss_pred --CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC-CcEEEcc
Q psy3914 130 --SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC-GEWKLGG 205 (852)
Q Consensus 130 --~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~-g~~KL~D 205 (852)
...++|+||||+. .|..++.........+++..++.+++||+.||.||| +.+|+||||||+||||+.+ +.+||+|
T Consensus 122 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp~NILl~~~~~~~kl~D 200 (420)
T 1j1b_A 122 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCD 200 (420)
T ss_dssp TTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-TTTEECSCCSGGGEEEETTTTEEEECC
T ss_pred CCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCChhhEEEeCCCCeEEecc
Confidence 1135789999999 787777555555678999999999999999999999 9999999999999999965 6789999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-----------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS----------- 273 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~----------- 273 (852)
||+++.+.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|..||.+.....
T Consensus 201 FG~a~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~ 275 (420)
T 1j1b_A 201 FGSAKQLVRGE-----PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 275 (420)
T ss_dssp CTTCEECCTTC-----CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCS
T ss_pred chhhhhcccCC-----CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 99997543211 1123568899999999854 478999999999999999999999996543210
Q ss_pred -----------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 -----------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 -----------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++.+||..||.+||++.++++| +||+.
T Consensus 276 p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h-----p~f~~ 342 (420)
T 1j1b_A 276 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH-----SFFDE 342 (420)
T ss_dssp CCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS-----GGGGG
T ss_pred CCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC-----Hhhcc
Confidence 013468899999999999999999999999997 78854
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-36 Score=324.50 Aligned_cols=243 Identities=14% Similarity=0.193 Sum_probs=204.2
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
....|++.+.|| .|++|.||.|+++.+|..|++|++.. ......+.+|+++++.++||||+++++++...
T Consensus 17 ~~~~y~i~~~lg--------~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (302)
T 2j7t_A 17 PNEVWEIVGELG--------DGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHD 88 (302)
T ss_dssp GGGTEEEEEEEE--------CSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC
T ss_pred Cccceeecceec--------cCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeC
Confidence 445699999999 89999999999999999999999976 44567889999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+.+|+||||+. +|..++.. ....+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|||
T Consensus 89 --~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 162 (302)
T 2j7t_A 89 --GKLWIMIEFCPGGAVDAIMLE---LDRGLTEPQIQVVCRQMLEALNFLH-SKRIIHRDLKAGNVLMTLEGDIRLADFG 162 (302)
T ss_dssp ---CEEEEEECCTTEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCSGGGEEECTTSCEEECCCH
T ss_pred --CeEEEEEEeCCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHh-cCCcccCCCCHHHEEECCCCCEEEEECC
Confidence 89999999997 68888743 2356899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccc-----cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENS-----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS----------- 271 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-----~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~----------- 271 (852)
++........ ......|++.|+|||++ .+..++.++|||||||++|+|++|..||.+...
T Consensus 163 ~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 238 (302)
T 2j7t_A 163 VSAKNLKTLQ----KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD 238 (302)
T ss_dssp HHHHHHHHHH----C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC
T ss_pred CCcccccccc----ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccC
Confidence 9764322111 11234678899999997 466788899999999999999999999964321
Q ss_pred ---ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 272 ---LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 272 ---l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
......+|..+.+++.+||..||.+||++.++++| +||.+.
T Consensus 239 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h-----~~~~~~ 282 (302)
T 2j7t_A 239 PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH-----PFVSSI 282 (302)
T ss_dssp CCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS-----TTTTTC
T ss_pred CcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC-----hHHhhh
Confidence 11235678899999999999999999999999997 899753
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-36 Score=324.41 Aligned_cols=245 Identities=13% Similarity=0.213 Sum_probs=204.1
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC------CCchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS------ADTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~------~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
.+|++++.|| .|++|.||.|.++.++..|+||++.. ......+.+|+++++.++||||+++++++.
T Consensus 5 ~~y~i~~~lg--------~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 76 (305)
T 2wtk_C 5 GKYLMGDLLG--------EGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLY 76 (305)
T ss_dssp CCBCCCCEEE--------ECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred cceeEeeEEe--------cCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEE
Confidence 4699999999 99999999999999999999999976 234567899999999999999999999985
Q ss_pred cCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 128 SPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
......+||||||+. +|.+++... ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+||
T Consensus 77 ~~~~~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH-~~~i~H~dlkp~NIl~~~~~~~kl~df 153 (305)
T 2wtk_C 77 NEEKQKMYMVMEYCVCGMQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLH-SQGIVHKDIKPGNLLLTTGGTLKISAL 153 (305)
T ss_dssp CC---CEEEEEECCSEEHHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred cCCCCeEEEEehhccCCHHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHH-HCCeeecCCCcccEEEcCCCcEEeecc
Confidence 443378999999999 787877432 2457899999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCC--CCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------cc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSH--VTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LS 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~--~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~ 273 (852)
|++........ ........|++.|+|||++.+. .++.++|||||||++|+|++|..||.+... ..
T Consensus 154 g~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~ 231 (305)
T 2wtk_C 154 GVAEALHPFAA--DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYA 231 (305)
T ss_dssp TTCEECCTTCS--SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC
T ss_pred ccccccCcccc--ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCC
Confidence 99875432111 1122345688999999998543 346799999999999999999999965422 22
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++.+||..||.+||++.++++| +||.+
T Consensus 232 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~-----~~~~~ 269 (305)
T 2wtk_C 232 IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH-----SWFRK 269 (305)
T ss_dssp CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS-----HHHHS
T ss_pred CCCccCHHHHHHHHHHccCChhhCCCHHHHhcC-----ccccc
Confidence 346789999999999999999999999999997 66643
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-36 Score=341.05 Aligned_cols=248 Identities=15% Similarity=0.222 Sum_probs=191.1
Q ss_pred CeeE-eccccCCCCCCcccCCceEEEEEEEc--CCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 55 AYEV-GEPAVSFSGCFTQKHTFWKFHGGKKK--GSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i-~e~Ig~~~g~~~~~Gs~~~Vy~a~~k--~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.|++ +++|| .|+||+||+|+++ .++..||||++........+.+|+.+|+.|+||||+++++++.....
T Consensus 21 ~y~~~g~~lG--------~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 92 (405)
T 3rgf_A 21 LFEYEGCKVG--------RGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHAD 92 (405)
T ss_dssp HEECSSCCCC-------------EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTT
T ss_pred hhhhcCcEee--------ecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCC
Confidence 3777 67899 9999999999977 46889999999886666788999999999999999999999965434
Q ss_pred CeEEEEEeecc-cHHHHHHhhhh-----cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE----ccCCcE
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLK-----ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI----NSCGEW 201 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~-----~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV----~~~g~~ 201 (852)
..+||||||+. +|.+++..... ....+++..++.++.||+.||.||| +.+|+||||||+||+| +.+|.+
T Consensus 93 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH-~~~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 93 RKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH-ANWVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp TEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECCSSTTTTCE
T ss_pred CeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH-hCCEeCCCcCHHHeEEecCCCCCCcE
Confidence 88999999999 78888753221 1235899999999999999999999 8999999999999999 677899
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------- 272 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------- 272 (852)
||+|||+++.+.... ..........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+....
T Consensus 172 kl~Dfg~a~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~ 250 (405)
T 3rgf_A 172 KIADMGFARLFNSPL-KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 250 (405)
T ss_dssp EECCTTCCC-----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCC
T ss_pred EEEECCCceecCCCC-cccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccch
Confidence 999999997553221 11223335678999999999855 55899999999999999999999999543210
Q ss_pred -------------------cC-------------------------------cCCCChhHHHHHHHhccCCCCCCCCHHH
Q psy3914 273 -------------------SN-------------------------------IDNIPENLKRVYLELISERPNQRPNPAD 302 (852)
Q Consensus 273 -------------------~~-------------------------------~~~ip~~L~~li~~lL~~nP~~Rps~~e 302 (852)
.. ....++.+.++|++||..||.+|||+.+
T Consensus 251 ~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e 330 (405)
T 3rgf_A 251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330 (405)
T ss_dssp HHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHH
T ss_pred HHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 00 0112678899999999999999999999
Q ss_pred HHHhhcCCCCCCcch
Q psy3914 303 FIMRNRKPGGYFKND 317 (852)
Q Consensus 303 lL~~l~~~~~fF~n~ 317 (852)
+++| +||.+.
T Consensus 331 ~L~h-----p~f~~~ 340 (405)
T 3rgf_A 331 AMQD-----PYFLED 340 (405)
T ss_dssp HHTS-----GGGTSS
T ss_pred HhcC-----hhhccC
Confidence 9998 898653
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=334.85 Aligned_cols=239 Identities=19% Similarity=0.265 Sum_probs=198.9
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC----chHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD----TYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~----~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|++|.||+|+++.+|+.|+||++.... ....+.+|+++++.++||||+++++++.+.
T Consensus 26 ~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 96 (331)
T 4aaa_A 26 KYENLGLVG--------EGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK- 96 (331)
T ss_dssp GEEEEEEGG--------GGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-
T ss_pred hheeeeEEe--------ecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecC-
Confidence 599999999 9999999999999999999999987622 234577999999999999999999999988
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+|+||||+. .|..++ .....+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|||+
T Consensus 97 -~~~~lv~e~~~~~~l~~~~----~~~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 170 (331)
T 4aaa_A 97 -KRWYLVFEFVDHTILDDLE----LFPNGLDYQVVQKYLFQIINGIGFCH-SHNIIHRDIKPENILVSQSGVVKLCDFGF 170 (331)
T ss_dssp -TEEEEEEECCSEEHHHHHH----HSTTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTSCEEECCCTT
T ss_pred -CEEEEEEecCCcchHHHHH----hhccCCCHHHHHHHHHHHHHHHHHHH-HCCEEccCcChheEEEcCCCcEEEEeCCC
Confidence 89999999999 455554 23357899999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc--------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS-------------- 273 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~-------------- 273 (852)
+....... .......+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.....
T Consensus 171 ~~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 246 (331)
T 4aaa_A 171 ARTLAAPG----EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIP 246 (331)
T ss_dssp C----------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCH
T ss_pred ceeecCCc----cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCh
Confidence 87543211 12234567889999999855 478899999999999999999999996543211
Q ss_pred ----------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 274 ----------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 274 ----------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
....+++.+.+++.+||..||.+|||+.++++| +||+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h-----p~f~~~ 313 (331)
T 4aaa_A 247 RHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH-----DFFQMD 313 (331)
T ss_dssp HHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS-----HHHHGG
T ss_pred hhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC-----chhccC
Confidence 013678999999999999999999999999997 888654
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=345.26 Aligned_cols=243 Identities=15% Similarity=0.167 Sum_probs=208.3
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
..+|++.+.|| .|+||+||+|+++.+++.||||++.+ ......+.+|..+++.++||||++++++++
T Consensus 73 ~~~y~~~~~LG--------~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 73 REDFEILKVIG--------RGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp GGGEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhheEEEEEEE--------eCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34699999999 99999999999999999999999986 333445889999999999999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
+. ..+||||||+. +|.++|.+ ..+.+++..++.++.||+.||.||| +.+|+||||||+||+++.+|.+||+|
T Consensus 145 ~~--~~~~lV~Ey~~gg~L~~~l~~---~~~~l~e~~~~~~~~qi~~aL~~LH-~~giiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 145 DD--NNLYLVMDYYVGGDLLTLLSK---FEDRLPEEMARFYLAEMVIAIDSVH-QLHYVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp CS--SEEEEEECCCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEECC
T ss_pred eC--CEEEEEEecCCCCcHHHHHHH---ccCCCCHHHHHHHHHHHHHHHHHHH-hCCeEecccCHHHeeEcCCCCEEEcc
Confidence 88 99999999997 79999853 2367999999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCcccc-----CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-----SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------- 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-----~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------- 272 (852)
||++....... ........||+.|+|||++. ...++.++|||||||++|||++|..||.+....
T Consensus 219 FGla~~~~~~~---~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~ 295 (437)
T 4aw2_A 219 FGSCLKLMEDG---TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295 (437)
T ss_dssp CTTCEECCTTS---CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred hhhhhhcccCC---CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhh
Confidence 99987543221 11122457999999999984 566889999999999999999999999654321
Q ss_pred -----c---CcCCCChhHHHHHHHhccCCCCC--CCCHHHHHHhhcCCCCCCcch
Q psy3914 273 -----S---NIDNIPENLKRVYLELISERPNQ--RPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 -----~---~~~~ip~~L~~li~~lL~~nP~~--Rps~~elL~~l~~~~~fF~n~ 317 (852)
. ....+++.+.++|++||..+|++ |+++.++++| +||++.
T Consensus 296 ~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H-----pff~~i 345 (437)
T 4aw2_A 296 HKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH-----PFFSGI 345 (437)
T ss_dssp HHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS-----GGGTTC
T ss_pred ccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC-----CccCCC
Confidence 1 12458999999999999888888 9999999998 899764
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-36 Score=340.04 Aligned_cols=238 Identities=17% Similarity=0.233 Sum_probs=194.3
Q ss_pred CeeEe-ccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHH-HhCCCCCcceEeeeEEc--CC
Q psy3914 55 AYEVG-EPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKL-KTLRHPSILTFLDSVES--PS 130 (852)
Q Consensus 55 ~Y~i~-e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~L-k~LrHPnIlk~~d~~e~--~~ 130 (852)
.|.+. +.|| .|++|+||.|+++.+|+.|+||++.. ...+.+|+.++ +.++||||++++++++. ..
T Consensus 62 ~y~~~~~~LG--------~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~ 130 (400)
T 1nxk_A 62 DYKVTSQVLG--------LGINGKVLQIFNKRTQEKFALKMLQD---CPKARREVELHWRASQCPHIVRIVDVYENLYAG 130 (400)
T ss_dssp TEEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEEC---SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cceeccceee--------eccCeEEEEEEECCCCCEEEEEEeCc---chhHHHHHHHHHHhcCCCCcceEeEEEeecccC
Confidence 57775 7899 99999999999999999999999975 34678888887 45589999999999875 11
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc---CCcEEEcc
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS---CGEWKLGG 205 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~---~g~~KL~D 205 (852)
..++||||||+. +|.+++... ....+++..+..++.||+.||.||| +.+|+||||||+|||++. +|.+||+|
T Consensus 131 ~~~~~lv~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 131 RKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEEEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred CcEEEEEEEeCCCCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCcCcceEEEecCCCCccEEEEe
Confidence 268999999997 799998532 2246899999999999999999999 899999999999999998 78899999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc------------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------ 273 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------ 273 (852)
||+++..... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus 208 FG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~ 282 (400)
T 1nxk_A 208 FGFAKETTSH-----NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 282 (400)
T ss_dssp CTTCEECC----------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHT
T ss_pred cccccccCCC-----CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcC
Confidence 9998754321 12234568899999999988889999999999999999999999996543221
Q ss_pred -------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 -------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 -------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.++|++||..||.+|||+.++++| +||.+
T Consensus 283 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h-----p~~~~ 327 (400)
T 1nxk_A 283 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH-----PWIMQ 327 (400)
T ss_dssp CCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS-----HHHHT
T ss_pred cccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC-----ccccC
Confidence 124688999999999999999999999999998 67643
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-36 Score=335.70 Aligned_cols=241 Identities=15% Similarity=0.262 Sum_probs=202.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEc-------CCCeEEEEEEEeCCC---chHHHHHHHHHHHhC-CCCCcceE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK-------GSNEKVTIFLNDSAD---TYEPALSYVKKLKTL-RHPSILTF 122 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k-------~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~L-rHPnIlk~ 122 (852)
.+|++++.|| .|+||.||+|++. .++..|+||++.... ....+.+|+.+|+.+ +||||+++
T Consensus 81 ~~~~~~~~LG--------~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~ 152 (370)
T 2psq_A 81 DKLTLGKPLG--------EGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL 152 (370)
T ss_dssp GGEEEEEEES--------CCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCE
T ss_pred HHCEeeeEEe--------eCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeE
Confidence 4699999999 9999999999875 345789999998632 345688999999999 89999999
Q ss_pred eeeEEcCCCCeEEEEEeecc--cHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceeccc
Q psy3914 123 LDSVESPSKSLVYLAVEYVE--PIFYHLDNTLK------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHV 188 (852)
Q Consensus 123 ~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DI 188 (852)
++++.+. +.+||||||+. +|.+++..... ....++...+..++.||+.||.||| +.+|+||||
T Consensus 153 ~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDl 229 (370)
T 2psq_A 153 LGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA-SQKCIHRDL 229 (370)
T ss_dssp EEEECSS--SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCC
T ss_pred EEEEccC--CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH-hCCeecccc
Confidence 9999987 88999999998 79999964321 1245889999999999999999999 899999999
Q ss_pred CCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCC
Q psy3914 189 NHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQST 267 (852)
Q Consensus 189 kp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~ 267 (852)
||+||+++.+|.+||+|||++........ ........+|+.|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 230 kp~NIll~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~ 307 (370)
T 2psq_A 230 AARNVLVTENNVMKIADFGLARDINNIDY--YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 307 (370)
T ss_dssp CGGGEEECTTCCEEECCCSSCEETTCCCT--TCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred chhhEEECCCCCEEEccccCCcccCcccc--eecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999999999875433211 112223456789999999988889999999999999999999 999986
Q ss_pred CCcc------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 268 NRKS------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 268 ~~~~------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+... ......++..+.+++.+||..+|.+||++.++++++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L 359 (370)
T 2psq_A 308 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 359 (370)
T ss_dssp TCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 5322 223457888999999999999999999999999875
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=322.57 Aligned_cols=237 Identities=15% Similarity=0.167 Sum_probs=203.1
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC--CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA--DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.+|.+.+.|| .|++|.||.|+++.+|+.|+||++... .....+.+|+.+++.++||||+++++++++.
T Consensus 9 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 78 (304)
T 2jam_A 9 KTFIFMEVLG--------SGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYEST-- 78 (304)
T ss_dssp HHEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECS--
T ss_pred ccceeeeecc--------CCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccC--
Confidence 3599999999 999999999999999999999999872 2345688999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE---ccCCcEEEccc
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI---NSCGEWKLGGL 206 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV---~~~g~~KL~DF 206 (852)
..+|+||||+. +|.+++.. .+.+++..+..++.||+.||.||| +.+++||||||+||++ +.++.+||+||
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dikp~NIl~~~~~~~~~~kl~Df 153 (304)
T 2jam_A 79 THYYLVMQLVSGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLH-ENGIVHRDLKPENLLYLTPEENSKIMITDF 153 (304)
T ss_dssp SEEEEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCSCCGGGCEESSSSTTCCEEBCSC
T ss_pred CEEEEEEEcCCCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCHHHEEEecCCCCCCEEEccC
Confidence 89999999997 79888843 257899999999999999999999 8999999999999999 77899999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------------- 272 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------------- 272 (852)
|++..... .......|++.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 154 g~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 227 (304)
T 2jam_A 154 GLSKMEQN------GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFE 227 (304)
T ss_dssp STTCCCCC------BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCC
T ss_pred CcceecCC------CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 99864321 1122356888999999998888999999999999999999999999653211
Q ss_pred -cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 -SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 -~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....+|+.+.+++.+||..||.+||++.++++| +||.+
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h-----~~~~~ 267 (304)
T 2jam_A 228 SPFWDDISESAKDFICHLLEKDPNERYTCEKALSH-----PWIDG 267 (304)
T ss_dssp TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS-----HHHHS
T ss_pred ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC-----ccccC
Confidence 1235789999999999999999999999999997 67643
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-36 Score=320.38 Aligned_cols=237 Identities=19% Similarity=0.257 Sum_probs=203.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC--------CchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA--------DTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~--------~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
+|++++.|| .|++|.||.|+++.+|+.|+||++... ...+.+.+|+.+++.++||||+++++++
T Consensus 6 ~y~~~~~lg--------~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 77 (283)
T 3bhy_A 6 HYEMGEELG--------SGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIF 77 (283)
T ss_dssp HEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hhhhHHhhc--------ccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhhee
Confidence 599999999 999999999999999999999999862 1367899999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC----c
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG----E 200 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g----~ 200 (852)
.+. ..+|+||||+. +|.+++.. ...+++..+..++.||+.||.||| +.+++||||||+||+++.++ .
T Consensus 78 ~~~--~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~~~~ 150 (283)
T 3bhy_A 78 ENK--TDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLH-SKRIAHFDLKPENIMLLDKNVPNPR 150 (283)
T ss_dssp ECS--SEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEESCSSSSSCC
T ss_pred cCC--CeEEEEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-hCCccCCCCChHHEEEecCCCCCCc
Confidence 987 89999999996 79998843 257899999999999999999999 89999999999999999877 7
Q ss_pred EEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------
Q psy3914 201 WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------- 272 (852)
Q Consensus 201 ~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------- 272 (852)
+||+|||++....... ......+++.|+|||++.+..++.++|+|||||++|+|++|..||.+....
T Consensus 151 ~kl~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 225 (283)
T 3bhy_A 151 IKLIDFGIAHKIEAGN-----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISA 225 (283)
T ss_dssp EEECCCTTCEECC-------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred eEEEecccceeccCCC-----cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHh
Confidence 9999999987543221 122346788999999998888899999999999999999999999654221
Q ss_pred -------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 -------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 -------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....+|..+.+++.+||..||.+||++.++++| +||+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h-----~~~~~ 271 (283)
T 3bhy_A 226 VNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH-----SWIKA 271 (283)
T ss_dssp TCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC-----HHHHH
T ss_pred cccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC-----HHHHH
Confidence 1125678899999999999999999999999997 66654
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=319.13 Aligned_cols=240 Identities=19% Similarity=0.203 Sum_probs=201.6
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
...|++.+.|| .|++|+||+|.+..++..|++|++.. ......+.+|+.+++.++||||++++++++.
T Consensus 25 ~~~~~~~~~lg--------~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 96 (290)
T 1t4h_A 25 GRFLKFDIEIG--------RGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWES 96 (290)
T ss_dssp SCEEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred ceeEEeeeecc--------CCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecc
Confidence 34589999999 99999999999999999999999976 2234568899999999999999999999875
Q ss_pred C--CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC--ceecccCCCCEEEc-cCCcE
Q psy3914 129 P--SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDAD--LRHNHVNHTSIFIN-SCGEW 201 (852)
Q Consensus 129 ~--~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~--ivH~DIkp~NIlV~-~~g~~ 201 (852)
. .+..+|+||||+. +|.+++... ..+++..+..++.||+.||.||| +.+ ++||||||+||+++ .+|.+
T Consensus 97 ~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH-~~~~~i~H~dikp~Nil~~~~~~~~ 171 (290)
T 1t4h_A 97 TVKGKKCIVLVTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLH-TRTPPIIHRDLKCDNIFITGPTGSV 171 (290)
T ss_dssp ESSSCEEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH-TSSSCCCCSCCCGGGEEESSTTSCE
T ss_pred ccCCCceEEEEEEecCCCCHHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHH-cCCCCEEECCCCHHHEEEECCCCCE
Confidence 2 2367999999997 799998432 56899999999999999999999 888 99999999999998 78999
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------- 272 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------- 272 (852)
||+|||++..... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....
T Consensus 172 kl~Dfg~~~~~~~------~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 244 (290)
T 1t4h_A 172 KIGDLGLATLKRA------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS 244 (290)
T ss_dssp EECCTTGGGGCCT------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT
T ss_pred EEeeCCCcccccc------cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhc
Confidence 9999999864322 11224568889999998864 4888999999999999999999999653221
Q ss_pred -----cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 -----SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 -----~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....+++.+.+++.+||..||.+||++.++++| +||++.
T Consensus 245 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h-----~~f~~~ 289 (290)
T 1t4h_A 245 GVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH-----AFFQEE 289 (290)
T ss_dssp TCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS-----GGGC--
T ss_pred cCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC-----cccccC
Confidence 1234567899999999999999999999999998 899763
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-36 Score=332.34 Aligned_cols=234 Identities=15% Similarity=0.202 Sum_probs=202.6
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.|| .|++|+||+|++..+|+.|+||++... ...+.+.+|+++|+.++||||+++++++.+.
T Consensus 55 ~y~~~~~lG--------~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 126 (348)
T 1u5q_A 55 LFSDLREIG--------HGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE 126 (348)
T ss_dssp HEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred heeeeeEEc--------cCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence 499999999 999999999999999999999999762 1235678999999999999999999999987
Q ss_pred CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 130 SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 130 ~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
+..||||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||+
T Consensus 127 --~~~~lv~e~~~g~l~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 200 (348)
T 1u5q_A 127 --HTAWLVMEYCLGSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLH-SHNMIHRDVKAGNILLSEPGLVKLGDFGS 200 (348)
T ss_dssp --TEEEEEEECCSEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCSGGGEEEETTTEEEECCCTT
T ss_pred --CeEEEEEecCCCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHH-hCCeeeCCCCHHHEEECCCCCEEEeeccC
Confidence 89999999998 78887743 2367899999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccc---cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENS---LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------- 272 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~---~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------- 272 (852)
+..... .....||+.|+|||++ ....++.++|||||||++|||++|..||.+....
T Consensus 201 a~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~ 272 (348)
T 1u5q_A 201 ASIMAP--------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA 272 (348)
T ss_dssp CBSSSS--------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC
T ss_pred ceecCC--------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC
Confidence 864321 1235688999999997 3567888999999999999999999998653221
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
.....+|+.+.+++.+||..||.+||++.++++| +||.
T Consensus 273 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h-----~~~~ 310 (348)
T 1u5q_A 273 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH-----RFVL 310 (348)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC-----HHHH
T ss_pred CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC-----hhhh
Confidence 1235678999999999999999999999999997 6664
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-36 Score=322.78 Aligned_cols=237 Identities=16% Similarity=0.250 Sum_probs=207.0
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
..|++.+.|| .|++|.||.|+++.+++.|+||+++. ......+.+|+.+++.++||||+++++++.+.
T Consensus 22 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 92 (303)
T 3a7i_A 22 ELFTKLEKIG--------KGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD- 92 (303)
T ss_dssp GTEEEEEEEE--------ECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEET-
T ss_pred HHHHHhhhhc--------ccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-
Confidence 4599999999 99999999999999999999999987 34567899999999999999999999999987
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+|+||||+. +|.+++. .+.+++..+..++.||+.||.||| ..|++||||+|+||+++.+|.+||+|||+
T Consensus 93 -~~~~lv~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~ 165 (303)
T 3a7i_A 93 -TKLWIIMEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYLH-SEKKIHRDIKAANVLLSEHGEVKLADFGV 165 (303)
T ss_dssp -TEEEEEEECCTTEEHHHHHT-----TSCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred -CeEEEEEEeCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH-HCCCccCCCChheEEECCCCCEEEeeccc
Confidence 89999999997 7888883 257899999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc------------ccCcC
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS------------LSNID 276 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------------l~~~~ 276 (852)
+....... .......|++.|+|||++.+..++.++|||||||++|+|++|..||.+... .....
T Consensus 166 ~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 241 (303)
T 3a7i_A 166 AGQLTDTQ----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG 241 (303)
T ss_dssp CEECBTTB----CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCS
T ss_pred ceecCccc----cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCcc
Confidence 87543321 112345688899999999888888999999999999999999999964321 12235
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
.+|..+.+++.+||..||.+||++.++++| +||.
T Consensus 242 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~-----~~~~ 275 (303)
T 3a7i_A 242 NYSKPLKEFVEACLNKEPSFRPTAKELLKH-----KFIL 275 (303)
T ss_dssp SCCHHHHHHHHHHCCSSGGGSCCHHHHTTC-----HHHH
T ss_pred ccCHHHHHHHHHHcCCChhhCcCHHHHhhC-----hhhh
Confidence 789999999999999999999999999997 6663
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=342.20 Aligned_cols=236 Identities=14% Similarity=0.222 Sum_probs=203.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|++|+||+|+++.+|+.||||++.. ......+.+|+++|+.++||||+++++++++.
T Consensus 22 ~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 93 (486)
T 3mwu_A 22 ERYNIVCMLG--------KGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS 93 (486)
T ss_dssp HHEEEEEEEE--------CCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred cceEEeEEEe--------ecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcC
Confidence 4599999999 99999999999999999999999976 44567899999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEc---cCCcEEEc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN---SCGEWKLG 204 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~---~~g~~KL~ 204 (852)
..+|+||||+. +|.+.+... ..+++..+..++.||+.||.||| +.||+||||||+||+++ .++.+||+
T Consensus 94 --~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~al~~lH-~~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 166 (486)
T 3mwu_A 94 --SSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMH-KHNIVHRDLKPENILLESKEKDCDIKII 166 (486)
T ss_dssp --SEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEESSSSTTCCEEEC
T ss_pred --CEEEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH-HCCeEeccCchHHEEEecCCCCCCEEEE
Confidence 99999999998 788877432 57899999999999999999999 89999999999999995 45679999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------ 272 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------ 272 (852)
|||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....
T Consensus 167 Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~ 240 (486)
T 3mwu_A 167 DFGLSTCFQQN-----TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA 240 (486)
T ss_dssp SCSCTTTBCCC---------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred ECCcCeECCCC-----CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence 99998754321 12234568999999999865 4889999999999999999999999654321
Q ss_pred ---cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 273 ---SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 273 ---~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
.....+++.+.++|++||..||.+|||+.++++| +||+
T Consensus 241 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h-----p~~~ 281 (486)
T 3mwu_A 241 FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH-----PWIQ 281 (486)
T ss_dssp SCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC-----HHHH
T ss_pred CCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC-----Hhhc
Confidence 2235688999999999999999999999999998 6764
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=327.04 Aligned_cols=250 Identities=14% Similarity=0.228 Sum_probs=187.8
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
...+|++++.|| .|+++.||.|++..+++.|+||++.. ......+.+|+.+++.++||||+++++++..
T Consensus 13 ~~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 84 (303)
T 2vwi_A 13 NRDDYELQEVIG--------SGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV 84 (303)
T ss_dssp CCCCCEEEEECC-----------CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES
T ss_pred chhhhhhhheec--------cccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee
Confidence 345799999999 89999999999999999999999876 2345567899999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhh----cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLK----ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~----~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
. +..|+||||+. +|.+++..... ....+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.+|
T Consensus 85 ~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~k 161 (303)
T 2vwi_A 85 K--DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH-KNGQIHRDVKAGNILLGEDGSVQ 161 (303)
T ss_dssp S--SCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCSGGGEEECTTCCEE
T ss_pred c--CCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCCCCChhhEEEcCCCCEE
Confidence 7 88999999997 79988854321 2356899999999999999999999 89999999999999999999999
Q ss_pred EcccchhhccccccCC-CCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------
Q psy3914 203 LGGLEYMEKISEASCI-PMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------- 272 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~-~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------- 272 (852)
|+|||++......... .........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+....
T Consensus 162 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 241 (303)
T 2vwi_A 162 IADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ 241 (303)
T ss_dssp ECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHT
T ss_pred EEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhc
Confidence 9999998754332111 1112234568899999999843 56788999999999999999999999643211
Q ss_pred -------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 -------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 -------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....+++.+.+++.+||..||.+||++.++++| +||++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h-----~~~~~~ 294 (303)
T 2vwi_A 242 NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH-----KFFQKA 294 (303)
T ss_dssp SSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS-----TTC---
T ss_pred cCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC-----hhhhcC
Confidence 1135678899999999999999999999999997 899753
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-37 Score=344.14 Aligned_cols=243 Identities=15% Similarity=0.189 Sum_probs=195.0
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHH---HHHHhCCCCCcceEe
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYV---KKLKTLRHPSILTFL 123 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~---~~Lk~LrHPnIlk~~ 123 (852)
....|++++.|| .|++|.||+|+++.+|+.||||++.. ....+.+.+|+ +.|+.++||||++++
T Consensus 71 ~~~~y~~~~~lG--------~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~ 142 (377)
T 3byv_A 71 RPRTLVRGTVLG--------QEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVH 142 (377)
T ss_dssp CCEEEEEEEEEE--------EETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHH
T ss_pred CCceEEEcceee--------cCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHH
Confidence 345699999999 99999999999999999999999974 33457788999 555566899999998
Q ss_pred -------eeEEcCCC----------C-----eEEEEEeecc-cHHHHHHhhhhcC---CCCCHHHHHHHHHHHHHHHHHH
Q psy3914 124 -------DSVESPSK----------S-----LVYLAVEYVE-PIFYHLDNTLKEN---NEKKQIYISWGIFQITRALSFL 177 (852)
Q Consensus 124 -------d~~e~~~~----------~-----~~yIVtE~v~-~L~~~L~~~~~~~---~~l~e~~i~~~l~QI~~aL~fL 177 (852)
+++++... + ..||||||+. +|.+++....... ..+++..+..++.||+.||.||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 222 (377)
T 3byv_A 143 LRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASL 222 (377)
T ss_dssp HCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 77765410 0 3899999998 8999996432111 1233477888999999999999
Q ss_pred HhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCC-----------CCCcc
Q psy3914 178 INDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSH-----------VTKCS 246 (852)
Q Consensus 178 H~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-----------~~~~~ 246 (852)
| +.+|+||||||+|||++.+|.+||+|||+++.... ......| +.|+|||++.+. .++.+
T Consensus 223 H-~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~ 293 (377)
T 3byv_A 223 H-HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFS 293 (377)
T ss_dssp H-HTTEECSCCCGGGEEECTTCCEEECCGGGCEETTC-------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHH
T ss_pred H-hCCeecCCCCHHHEEEcCCCCEEEEechhheecCC-------cccCCCC-cCccChhhhcccccccccccccccCChh
Confidence 9 89999999999999999999999999999874322 1223456 799999998655 78999
Q ss_pred hhHHhHHHHHHHHHhCCCCCCCCccc-------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 247 TDMYGLGILIWEVFNGPLQSTNRKSL-------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 247 sDIwSLG~ll~el~tG~~pf~~~~~l-------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
+|||||||++|||++|..||.+.... .....+|+.+.+++.+||..||.+||++.++++| +||+.
T Consensus 294 ~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h-----p~f~~ 365 (377)
T 3byv_A 294 FDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET-----PEYEQ 365 (377)
T ss_dssp HHHHHHHHHHHHHHHSSCCC------CCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS-----HHHHH
T ss_pred hhHHHHHHHHHHHHHCCCCCcccccccchhhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC-----hHHHH
Confidence 99999999999999999999654322 2236889999999999999999999999999997 77754
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-36 Score=316.77 Aligned_cols=236 Identities=16% Similarity=0.200 Sum_probs=202.3
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
.+|++.+.|| .|++|+||.|++. ++..|+||++.. ....+.+.+|++++++++||||+++++++.+. .
T Consensus 10 ~~y~~~~~lg--------~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~ 78 (269)
T 4hcu_A 10 SELTFVQEIG--------SGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ--A 78 (269)
T ss_dssp GGEEEEEEEE--------ECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSS--S
T ss_pred hhceeeheec--------CCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecC--C
Confidence 4699999999 9999999999987 577899999987 33457789999999999999999999999987 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
.+|+||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||++.
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH-~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 154 (269)
T 4hcu_A 79 PICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLE-EACVIHRDLAARNCLVGENQVIKVSDFGMTR 154 (269)
T ss_dssp SEEEEEECCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECGGGCEEECCTTGGG
T ss_pred ceEEEEEeCCCCcHHHHHHh---cCcccCHHHHHHHHHHHHHHHHHHH-hCCeecCCcchheEEEcCCCCEEeccccccc
Confidence 8999999997 79998843 2356899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDN 277 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~ 277 (852)
....... .......+++.|+|||++.+..++.++|+|||||++|+|++ |..||.+... ......
T Consensus 155 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 231 (269)
T 4hcu_A 155 FVLDDQY---TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRL 231 (269)
T ss_dssp GBCCHHH---HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTT
T ss_pred ccccccc---ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCc
Confidence 5433211 11123445678999999977788999999999999999999 8999965322 223456
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+++.+.+++.+||..||.+||++.++++++
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rps~~~ll~~l 261 (269)
T 4hcu_A 232 ASTHVYQIMNHCWRERPEDRPAFSRLLRQL 261 (269)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence 789999999999999999999999999985
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=335.19 Aligned_cols=242 Identities=14% Similarity=0.173 Sum_probs=205.8
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
...+|++.+.|| .|++|+||+|+++.++..|++|++... .....+.+|+++++.++||||+++++++.+
T Consensus 31 ~~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 102 (360)
T 3eqc_A 31 KDDDFEKISELG--------AGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 102 (360)
T ss_dssp CGGGEEEEEEEE--------ECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE
T ss_pred ccccceeeeeec--------CCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE
Confidence 445699999999 999999999999999999999999873 234568899999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. +.+||||||+. +|.+++... +.+++..+..++.||+.||.|||+.++++||||||+||+++.+|.+||+||
T Consensus 103 ~--~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Df 176 (360)
T 3eqc_A 103 D--GEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDF 176 (360)
T ss_dssp T--TEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCC
T ss_pred C--CEEEEEEECCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEEC
Confidence 8 89999999997 799988532 568999999999999999999994359999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------------- 272 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------------- 272 (852)
|++...... ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 177 g~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 250 (360)
T 3eqc_A 177 GVSGQLIDS------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDA 250 (360)
T ss_dssp CCCHHHHHH------C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------
T ss_pred CCCcccccc------cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccC
Confidence 998754322 112356888999999998888999999999999999999999998532110
Q ss_pred -----------------------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCC
Q psy3914 273 -----------------------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPG 311 (852)
Q Consensus 273 -----------------------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~ 311 (852)
.....++..+.+++++||..||.+|||+.++++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h----- 325 (360)
T 3eqc_A 251 AETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH----- 325 (360)
T ss_dssp -----------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS-----
T ss_pred CCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC-----
Confidence 0012468899999999999999999999999998
Q ss_pred CCCcchH
Q psy3914 312 GYFKNDL 318 (852)
Q Consensus 312 ~fF~n~l 318 (852)
+||+...
T Consensus 326 p~~~~~~ 332 (360)
T 3eqc_A 326 AFIKRSD 332 (360)
T ss_dssp HHHHHHH
T ss_pred hHhhcch
Confidence 7886543
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-36 Score=327.06 Aligned_cols=246 Identities=17% Similarity=0.260 Sum_probs=202.3
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhC-CCCCcceEeeeEEcC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTL-RHPSILTFLDSVESP 129 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~ 129 (852)
...+|++++.|| .|++|.||.|++..+|+.|+||++.. ......+.+|+.+++.+ +||||+++++++...
T Consensus 22 ~~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 22 PAGIFELVELVG--------NGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp CTTTEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred CCCcEEEEEEec--------cCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 455799999999 99999999999999999999999987 44567889999999999 799999999999863
Q ss_pred C----CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 130 S----KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 130 ~----~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
. ...+|+||||+. +|.+++... ....+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~dlkp~NIl~~~~~~~kl 170 (326)
T 2x7f_A 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLH-QHKVIHRDIKGQNVLLTENAEVKL 170 (326)
T ss_dssp C--CCCCEEEEEEECCTTEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCSGGGEEECTTCCEEE
T ss_pred cCccccceEEEEEEcCCCCcHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCcHHHEEEcCCCCEEE
Confidence 1 268999999997 799998542 2357899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCcccc-----CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-----SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------ 272 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-----~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------ 272 (852)
+|||++....... .......|++.|+|||++. +..++.++|||||||++|+|++|..||.+....
T Consensus 171 ~Dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~ 246 (326)
T 2x7f_A 171 VDFGVSAQLDRTV----GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 246 (326)
T ss_dssp CCCTTTC-----------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred eeCcCceecCcCc----cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh
Confidence 9999987543211 1122456888999999985 566888999999999999999999999653221
Q ss_pred -------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 -------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 -------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....+|+.+.+++.+||..||.+||++.++++| +||.+.
T Consensus 247 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h-----p~~~~~ 293 (326)
T 2x7f_A 247 PRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH-----PFIRDQ 293 (326)
T ss_dssp HHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS-----HHHHCC
T ss_pred hcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhC-----hHHhhC
Confidence 1135678999999999999999999999999997 788653
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-36 Score=326.53 Aligned_cols=237 Identities=17% Similarity=0.190 Sum_probs=202.4
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCC-CCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLR-HPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~~~~ 132 (852)
.+|++++.|| .|++|+||+|+++.+++.|+||++.. .....+.+|+++|+.++ ||||+++++++.+....
T Consensus 36 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~ 106 (330)
T 3nsz_A 36 DDYQLVRKLG--------RGKYSEVFEAINITNNEKVVVKILKP-VKKKKIKREIKILENLRGGPNIITLADIVKDPVSR 106 (330)
T ss_dssp GGEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEECS-CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTC
T ss_pred CceEEEEEec--------ccCCeEEEEEEECCCCcEEEEEEecc-cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCC
Confidence 4599999999 99999999999999999999999986 45678999999999998 99999999999974347
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC-cEEEcccchh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG-EWKLGGLEYM 209 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g-~~KL~DFg~a 209 (852)
..|+||||+. +|..++ ..+++..+..++.||+.||.||| +.|++||||||+||+++.++ .+||+|||++
T Consensus 107 ~~~lv~e~~~~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a 178 (330)
T 3nsz_A 107 TPALVFEHVNNTDFKQLY-------QTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178 (330)
T ss_dssp CEEEEEECCCCCCHHHHG-------GGCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred ceEEEEeccCchhHHHHH-------HhCCHHHHHHHHHHHHHHHHHHH-hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCc
Confidence 8999999998 687776 24789999999999999999999 89999999999999999777 8999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------- 272 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------- 272 (852)
...... .......++..|+|||++.+ ..++.++|||||||++|+|++|..||......
T Consensus 179 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~ 253 (330)
T 3nsz_A 179 EFYHPG-----QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 253 (330)
T ss_dssp EECCTT-----CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHH
T ss_pred eEcCCC-----CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchh
Confidence 754321 12234567889999999855 67899999999999999999999998321100
Q ss_pred ---------------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 ---------------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 ---------------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....+++.+.+++++||..||.+|||+.++++| +||++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h-----p~f~~~ 326 (330)
T 3nsz_A 254 YDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH-----PYFYTV 326 (330)
T ss_dssp HHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS-----GGGTTC
T ss_pred hhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC-----ccHhhh
Confidence 0011278999999999999999999999999998 899764
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=343.72 Aligned_cols=243 Identities=16% Similarity=0.190 Sum_probs=205.9
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
....|++.+.|| .|+||.||.|+++.+|+.||||++.+ ......+.+|..+|..++||||+++++++
T Consensus 59 ~~~~f~~~~~lG--------~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 59 QRDDFEILKVIG--------RGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp CGGGEEEEEEEE--------ECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred ChhhEEEEEEEe--------eCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 345699999999 99999999999999999999999986 22334578999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
++. +.+||||||+. +|.++|.+. ...+++..++.++.||+.||.||| +.+|+||||||+||+++.+|.+||+
T Consensus 131 ~~~--~~~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH-~~giiHrDLKp~NILld~~g~vkL~ 204 (412)
T 2vd5_A 131 QDE--NYLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVH-RLGYVHRDIKPDNILLDRCGHIRLA 204 (412)
T ss_dssp ECS--SEEEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEEC
T ss_pred eeC--CEEEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecccCHHHeeecCCCCEEEe
Confidence 988 99999999996 799998532 247899999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCcccc-------CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-------SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----- 272 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-------~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----- 272 (852)
|||++........ .......||+.|+|||++. ...++.++|+|||||++|||++|..||.+....
T Consensus 205 DFGla~~~~~~~~---~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~ 281 (412)
T 2vd5_A 205 DFGSCLKLRADGT---VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGK 281 (412)
T ss_dssp CCTTCEECCTTSC---EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred echhheeccCCCc---cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 9999875432211 1122457899999999984 456889999999999999999999999654321
Q ss_pred --------cC---cCCCChhHHHHHHHhccCCCCCC---CCHHHHHHhhcCCCCCCcch
Q psy3914 273 --------SN---IDNIPENLKRVYLELISERPNQR---PNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 --------~~---~~~ip~~L~~li~~lL~~nP~~R---ps~~elL~~l~~~~~fF~n~ 317 (852)
.. ...+|+.++++|++||. +|.+| +++.++++| +||++.
T Consensus 282 i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H-----pff~~i 334 (412)
T 2vd5_A 282 IVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH-----PFFFGL 334 (412)
T ss_dssp HHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS-----GGGTTC
T ss_pred HHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC-----CCcCCC
Confidence 11 14689999999999999 99998 589999997 899764
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=329.59 Aligned_cols=241 Identities=19% Similarity=0.276 Sum_probs=196.1
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
...+|++++.|| .|++|.||.|+++.+++.|+||++... .....+.+|+++++.++||||+++++++
T Consensus 10 ~~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 81 (311)
T 3ork_A 10 LSDRYELGEILG--------FGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTG 81 (311)
T ss_dssp ETTTEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEE
T ss_pred ecCcEEEEEEEc--------cCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEee
Confidence 345699999999 999999999999999999999999872 1234678999999999999999999998
Q ss_pred EcCCC--CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 127 ESPSK--SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 127 e~~~~--~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
+.... ...||||||+. +|.+++.. .+.+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+|
T Consensus 82 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~dlkp~Nil~~~~~~~k 156 (311)
T 3ork_A 82 EAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMISATNAVK 156 (311)
T ss_dssp EEEETTEEEEEEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEEETTSCEE
T ss_pred eccCCCCcccEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCCCcCCCCHHHEEEcCCCCEE
Confidence 76511 24599999997 79998843 257899999999999999999999 89999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc---------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--------- 273 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--------- 273 (852)
|+|||++..+..... .........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus 157 l~Dfg~a~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~ 235 (311)
T 3ork_A 157 VMDFGIARAIADSGN-SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED 235 (311)
T ss_dssp ECCCSCC-------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC
T ss_pred EeeccCccccccccc-ccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC
Confidence 999999875543211 1122234568999999999988889999999999999999999999996543211
Q ss_pred ------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 274 ------NIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 274 ------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
....+|+.+.+++.+||..||.+||+..+.+.+
T Consensus 236 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~ 274 (311)
T 3ork_A 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274 (311)
T ss_dssp CCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred CCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence 124689999999999999999999999888876
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=318.79 Aligned_cols=246 Identities=15% Similarity=0.240 Sum_probs=207.4
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC-----------chHHHHHHHHHHHhCC-CCCc
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD-----------TYEPALSYVKKLKTLR-HPSI 119 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~-----------~~~~~~~E~~~Lk~Lr-HPnI 119 (852)
+..+|++.+.|| .|++|.||.|+++.+|+.|+||+++... ..+.+.+|++++++++ ||||
T Consensus 15 ~~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i 86 (298)
T 1phk_A 15 FYENYEPKEILG--------RGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNI 86 (298)
T ss_dssp CTTTEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTB
T ss_pred hhhccceeeeec--------CCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 345699999999 9999999999999999999999998621 2356789999999996 9999
Q ss_pred ceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc
Q psy3914 120 LTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS 197 (852)
Q Consensus 120 lk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~ 197 (852)
++++++++.. ..+|+||||+. +|.+++.. ...+++..+..++.||+.||.||| +.+++||||+|+||+++.
T Consensus 87 ~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p~Nil~~~ 159 (298)
T 1phk_A 87 IQLKDTYETN--TFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALH-KLNIVHRDLKPENILLDD 159 (298)
T ss_dssp CCEEEEEECS--SEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECT
T ss_pred eeeeeeeccC--CeEEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCcceEEEcC
Confidence 9999999987 89999999997 79998853 257899999999999999999999 899999999999999999
Q ss_pred CCcEEEcccchhhccccccCCCCcccccccCCCcccCCcccc------CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc
Q psy3914 198 CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL------SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS 271 (852)
Q Consensus 198 ~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~------~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~ 271 (852)
+|.+||+|||++...... .......+++.|+|||++. ...++.++|||||||++|+|++|..||.+...
T Consensus 160 ~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 234 (298)
T 1phk_A 160 DMNIKLTDFGFSCQLDPG-----EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ 234 (298)
T ss_dssp TCCEEECCCTTCEECCTT-----CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred CCcEEEecccchhhcCCC-----cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH
Confidence 999999999998754321 1123456788999999973 45678899999999999999999999864322
Q ss_pred c---------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHHHHH
Q psy3914 272 L---------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDAL 322 (852)
Q Consensus 272 l---------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv~~l 322 (852)
. .....+|..+.+++.+||..||.+||++.++++| +||++..++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h-----~~~~~~~~~~~ 295 (298)
T 1phk_A 235 MLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH-----PFFQQYVVEEV 295 (298)
T ss_dssp HHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS-----GGGCTTC----
T ss_pred HHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC-----hHhhhccchhh
Confidence 1 1124678899999999999999999999999997 89988765544
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-36 Score=331.78 Aligned_cols=240 Identities=13% Similarity=0.130 Sum_probs=197.0
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCC--CCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRH--PSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrH--PnIlk~~d~ 125 (852)
.+..|++.+.|| .|++|.||+|.+. +++.|+||++... .....+.+|+.+|+.++| |||++++++
T Consensus 7 ~~~~y~i~~~lG--------~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~ 77 (343)
T 3dbq_A 7 KGRIYSILKQIG--------SGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 77 (343)
T ss_dssp SSCEEEEEEEES--------CCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred ecCEEEEEEEEe--------cCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeee
Confidence 455699999999 9999999999885 6889999999862 223567899999999987 999999999
Q ss_pred EEcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 126 VESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
+.+. ..+|||||+.. +|.+++.. ...+++..+..++.||+.||.||| +.+|+||||||+||+++ +|.+||+
T Consensus 78 ~~~~--~~~~lv~e~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH-~~~iiHrDikp~NIll~-~~~~kl~ 149 (343)
T 3dbq_A 78 EITD--QYIYMVMECGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIH-QHGIVHSDLKPANFLIV-DGMLKLI 149 (343)
T ss_dssp EECS--SEEEEEECCCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEEE-TTEEEEC
T ss_pred EeeC--CEEEEEEeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCcceEEEE-CCcEEEe
Confidence 9987 89999999777 89998843 367899999999999999999999 89999999999999996 6889999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccC-----------CCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-----------HVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-- 271 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-----------~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-- 271 (852)
|||++..+..... ........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+...
T Consensus 150 DFG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 227 (343)
T 3dbq_A 150 DFGIANQMQPDTT--SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 227 (343)
T ss_dssp CCSSSCCC--------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH
T ss_pred ecccccccCcccc--cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH
Confidence 9999875533211 112234578999999999743 6688899999999999999999999954211
Q ss_pred ------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 272 ------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 272 ------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
.......++.+.+++.+||..||.+|||+.++++| +||+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h-----p~~~ 278 (343)
T 3dbq_A 228 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH-----PYVQ 278 (343)
T ss_dssp HHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS-----HHHH
T ss_pred HHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC-----cccc
Confidence 12234567789999999999999999999999998 6775
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-36 Score=330.18 Aligned_cols=245 Identities=17% Similarity=0.204 Sum_probs=203.0
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
..+|++++.|| .|++|.||.|+++.+|+.|+||++.... ....+.+|+++++.++||||+++++++...
T Consensus 10 ~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 81 (353)
T 2b9h_A 10 SSDFQLKSLLG--------EGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPD 81 (353)
T ss_dssp CTTEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCS
T ss_pred ccceEEeeEEc--------CCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeeccc
Confidence 45699999999 9999999999999999999999997622 234677999999999999999999987653
Q ss_pred C---CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 130 S---KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 130 ~---~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
. ...+|+||||+. +|.+++.. ..+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|
T Consensus 82 ~~~~~~~~~lv~e~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH-~~~ivH~Dlkp~Nil~~~~~~~kl~D 155 (353)
T 2b9h_A 82 SFENFNEVYIIQELMQTDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLH-GSNVIHRDLKPSNLLINSNCDLKVCD 155 (353)
T ss_dssp CSTTCCCEEEEECCCSEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEECTTCCEEECC
T ss_pred ccCccceEEEEEeccCccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHeEEcCCCcEEEEe
Confidence 1 267999999999 78888843 57899999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCC------CcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------
Q psy3914 206 LEYMEKISEASCIP------MKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------ 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~~------~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------ 272 (852)
||++.......... ........||+.|+|||++ .+..++.++|||||||++|+|++|..||.+....
T Consensus 156 fg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 235 (353)
T 2b9h_A 156 FGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235 (353)
T ss_dssp CTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Confidence 99987554321110 0112235689999999997 4577899999999999999999999999654310
Q ss_pred -------------------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 273 -------------------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 273 -------------------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
.....+++.+.+++.+||..||.+|||+.++++| +||+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h-----p~~~ 310 (353)
T 2b9h_A 236 FGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH-----PYLQ 310 (353)
T ss_dssp HHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS-----GGGT
T ss_pred HHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC-----cccc
Confidence 0124688999999999999999999999999997 7886
Q ss_pred c
Q psy3914 316 N 316 (852)
Q Consensus 316 n 316 (852)
+
T Consensus 311 ~ 311 (353)
T 2b9h_A 311 T 311 (353)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=337.47 Aligned_cols=238 Identities=14% Similarity=0.230 Sum_probs=199.5
Q ss_pred eeE--eccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC--CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 56 YEV--GEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA--DTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 56 Y~i--~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
|.+ .+.|| .|++|.||+|+++.+|+.|+||++... ...+.+.+|+++|+.|+||||+++++++++.
T Consensus 89 ~~~~~~~~lG--------~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-- 158 (373)
T 2x4f_A 89 YTVSKTEILG--------GGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESK-- 158 (373)
T ss_dssp EEEEEEEECC-------------CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS--
T ss_pred eeeecceEEe--------cCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEEC--
Confidence 444 67899 999999999999999999999999873 2456788999999999999999999999987
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE--ccCCcEEEcccc
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI--NSCGEWKLGGLE 207 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV--~~~g~~KL~DFg 207 (852)
+.+||||||+. +|.+++... ...+++..+..++.||+.||.||| +.+|+||||||+||++ +.++.+||+|||
T Consensus 159 ~~~~lv~E~~~~~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG 234 (373)
T 2x4f_A 159 NDIVLVMEYVDGGELFDRIIDE---SYNLTELDTILFMKQICEGIRHMH-QMYILHLDLKPENILCVNRDAKQIKIIDFG 234 (373)
T ss_dssp SEEEEEEECCTTCEEHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEEEETTTTEEEECCCS
T ss_pred CEEEEEEeCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH-HCCcccccCCHHHEEEecCCCCcEEEEeCC
Confidence 89999999997 788887432 246899999999999999999999 8999999999999999 457889999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------------- 272 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------------- 272 (852)
++..+... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 235 ~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 309 (373)
T 2x4f_A 235 LARRYKPR-----EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309 (373)
T ss_dssp SCEECCTT-----CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCS
T ss_pred CceecCCc-----cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCh
Confidence 98754321 1222456899999999998888899999999999999999999999654321
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....+++.+.++|.+||..||.+||++.++++| +||.+.
T Consensus 310 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h-----p~~~~~ 349 (373)
T 2x4f_A 310 EEFQDISEEAKEFISKLLIKEKSWRISASEALKH-----PWLSDH 349 (373)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS-----HHHHCH
T ss_pred hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC-----cCcCCC
Confidence 1235789999999999999999999999999998 888764
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=338.69 Aligned_cols=237 Identities=15% Similarity=0.222 Sum_probs=186.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|++|.||.|.++.+|+.|+||++... .....+.+|+++|+.++||||+++++++...
T Consensus 29 ~~y~~~~~lG--------~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 100 (367)
T 2fst_X 29 ERYQNLSPVG--------SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 100 (367)
T ss_dssp TTEEEEEECC------------CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred CceEEeeEEe--------ecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecC
Confidence 3499999999 999999999999999999999999762 2345678999999999999999999998653
Q ss_pred ----CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 130 ----SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 130 ----~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
....+|+|||++. +|.+++.. ..+++..+..+++||+.||.||| +.|++||||||+||+++.+|.+||+
T Consensus 101 ~~~~~~~~~~lv~e~~~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH-~~givH~Dlkp~NIll~~~~~~kL~ 174 (367)
T 2fst_X 101 RSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKIL 174 (367)
T ss_dssp SSGGGCCCCEEEEECCCEECC----------CCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred CccccCCeEEEEecccCCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH-HCCeeeCCCCHhhEEECCCCCEEEe
Confidence 1256899999998 78888732 57899999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc----------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---------- 273 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---------- 273 (852)
|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.....
T Consensus 175 DFG~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g 247 (367)
T 2fst_X 175 DFGLARHTADE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247 (367)
T ss_dssp C----------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred ecccccccccc-------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 99998754321 224568889999999854 678899999999999999999999996543211
Q ss_pred --------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 --------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 --------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++.+||..||.+|||+.++++| +||+.
T Consensus 248 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h-----p~~~~ 317 (367)
T 2fst_X 248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH-----AYFAQ 317 (367)
T ss_dssp SCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS-----GGGTT
T ss_pred CCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC-----hhhhh
Confidence 013467889999999999999999999999998 88864
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-36 Score=329.51 Aligned_cols=241 Identities=15% Similarity=0.192 Sum_probs=201.2
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCe---EEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE---KVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~---~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
...+|++.+.|| .|++|+||.|..+.+++ .|+||++... .....+.+|+.+|+.++||||++++++
T Consensus 47 ~~~~y~i~~~lG--------~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 118 (325)
T 3kul_A 47 EASRIHIEKIIG--------SGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGV 118 (325)
T ss_dssp CGGGEEEEEEEE--------ETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred ChhHeEEeeEEE--------eCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 345699999999 99999999999986654 5999999862 234568899999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+.+. ..+||||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+|+||||||+||+++.+|.+||
T Consensus 119 ~~~~--~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dlkp~NIll~~~~~~kl 192 (325)
T 3kul_A 119 VTRG--RLAMIVTEYMENGSLDTFLRT---HDGQFTIMQLVGMLRGVGAGMRYLS-DLGYVHRDLAARNVLVDSNLVCKV 192 (325)
T ss_dssp ECGG--GCCEEEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTCCEEE
T ss_pred EEeC--CccEEEeeCCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH-HCCeeCCCCCcceEEECCCCCEEE
Confidence 9987 88999999997 79998842 2357899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-----------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS----------- 271 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~----------- 271 (852)
+|||++......... ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 193 ~Dfg~a~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~ 271 (325)
T 3kul_A 193 SDFGLSRVLEDDPDA-AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY 271 (325)
T ss_dssp CCCSSCEECC----C-CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTC
T ss_pred CCCCcccccccCccc-eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC
Confidence 999998865432211 111223345778999999977788999999999999999999 9999954321
Q ss_pred -ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|+.+.+++.+||..||.+||++.++++.+
T Consensus 272 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L 308 (325)
T 3kul_A 272 RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308 (325)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 223467899999999999999999999999999864
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-36 Score=325.88 Aligned_cols=242 Identities=18% Similarity=0.284 Sum_probs=202.4
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEE-----cCCCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEee
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKK-----KGSNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLD 124 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~-----k~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d 124 (852)
..+|++++.|| .|++|.||+|++ +.++..|+||++.... ....+.+|+++++.++||||+++++
T Consensus 22 ~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~ 93 (314)
T 2ivs_A 22 RKNLVLGKTLG--------EGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYG 93 (314)
T ss_dssp GGGEEEEEEEE--------ECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred hhheeeeeeec--------ccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEE
Confidence 34699999999 999999999998 3456899999998622 3456889999999999999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhh--------------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLK--------------------ENNEKKQIYISWGIFQITRALSFLINDAD 182 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~--------------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ 182 (852)
++.+. +.+|+||||+. +|.+++..... ....+++..+..++.||+.||.||| +.+
T Consensus 94 ~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ 170 (314)
T 2ivs_A 94 ACSQD--GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA-EMK 170 (314)
T ss_dssp EECSS--SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred EEecC--CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH-HCC
Confidence 99987 88999999997 79999964322 1234889999999999999999999 899
Q ss_pred ceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-
Q psy3914 183 LRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN- 261 (852)
Q Consensus 183 ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t- 261 (852)
++||||||+||+++.+|.+||+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|++
T Consensus 171 ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~ 248 (314)
T 2ivs_A 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS--YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248 (314)
T ss_dssp EECCCCSGGGEEEETTTEEEECCCTTCEECTTTSC--EECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred CcccccchheEEEcCCCCEEEcccccccccccccc--ceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhC
Confidence 99999999999999999999999999875432211 111223456778999999977778899999999999999999
Q ss_pred CCCCCCCCcc------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 262 GPLQSTNRKS------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 262 G~~pf~~~~~------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
|..||.+... ......+|+.+.+++.+||..||.+||++.++++++
T Consensus 249 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l 306 (314)
T 2ivs_A 249 GGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL 306 (314)
T ss_dssp SCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 9999965322 223467899999999999999999999999999875
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-36 Score=326.13 Aligned_cols=244 Identities=16% Similarity=0.192 Sum_probs=196.7
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC--CchHHHHHHHHHHHhCCCCCcceEeeeEEcC-
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA--DTYEPALSYVKKLKTLRHPSILTFLDSVESP- 129 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~- 129 (852)
..+|++.+.|| .|++|.||+|.++.+|+.|+||++... .....+.+|+++++.++||||+++++++...
T Consensus 10 ~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 81 (320)
T 2i6l_A 10 GSRYMDLKPLG--------CGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSG 81 (320)
T ss_dssp TTTEEEEEECC-------------CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTS
T ss_pred CCceeEEEEec--------cCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccc
Confidence 35699999999 999999999999999999999999863 2345788999999999999999999987432
Q ss_pred -----------CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEc-
Q psy3914 130 -----------SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN- 196 (852)
Q Consensus 130 -----------~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~- 196 (852)
....+|+||||+. +|.+++. .+.+++..+..++.||+.||.||| +.|++||||||+||+++
T Consensus 82 ~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~Nil~~~ 155 (320)
T 2i6l_A 82 SQLTDDVGSLTELNSVYIVQEYMETDLANVLE-----QGPLLEEHARLFMYQLLRGLKYIH-SANVLHRDLKPANLFINT 155 (320)
T ss_dssp CBCCC----CCSCSEEEEEEECCSEEHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCSGGGEEEET
T ss_pred cccccccccccccCceeEEeeccCCCHHHHhh-----cCCccHHHHHHHHHHHHHHHHHHH-hCCEecCCCCHHHEEEcC
Confidence 1268999999999 8888883 257899999999999999999999 89999999999999997
Q ss_pred cCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc--
Q psy3914 197 SCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS-- 273 (852)
Q Consensus 197 ~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~-- 273 (852)
.++.+||+|||++......... ........++..|+|||++ ....++.++|||||||++|+|++|..||.+.....
T Consensus 156 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 234 (320)
T 2i6l_A 156 EDLVLKIGDFGLARIMDPHYSH-KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQM 234 (320)
T ss_dssp TTTEEEECCCTTCBCC---------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred CCCeEEEccCccccccCCCccc-ccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 5679999999998754322111 1122334568899999998 44678899999999999999999999996543211
Q ss_pred ---------------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 274 ---------------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 274 ---------------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
....++..+.+++++||..||.+||++.++++| +||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h-----p~~ 309 (320)
T 2i6l_A 235 QLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH-----PYM 309 (320)
T ss_dssp HHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS-----HHH
T ss_pred HHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC-----ccc
Confidence 124689999999999999999999999999997 777
Q ss_pred cc
Q psy3914 315 KN 316 (852)
Q Consensus 315 ~n 316 (852)
+.
T Consensus 310 ~~ 311 (320)
T 2i6l_A 310 SI 311 (320)
T ss_dssp HT
T ss_pred cc
Confidence 53
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-36 Score=342.13 Aligned_cols=241 Identities=14% Similarity=0.167 Sum_probs=202.4
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-CchHHHHHHHHHHHhC------CCCCcceEeee
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-DTYEPALSYVKKLKTL------RHPSILTFLDS 125 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-~~~~~~~~E~~~Lk~L------rHPnIlk~~d~ 125 (852)
..+|++.+.|| .|+||+||+|.++.+++.||||++... .....+.+|+++++.+ .||||+++++.
T Consensus 96 ~~ry~~~~~LG--------~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~ 167 (429)
T 3kvw_A 96 AYRYEVLKVIG--------KGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLEN 167 (429)
T ss_dssp TTTEEEEEEEE--------ESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEE
T ss_pred cCcEEEEEEcc--------cCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEee
Confidence 45799999999 999999999999999999999999862 2345677888888877 57799999999
Q ss_pred EEcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc--EE
Q psy3914 126 VESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE--WK 202 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~--~K 202 (852)
+... ..+|+||||+. +|.+++... ....+++..+..++.||+.||.||| +.+|+||||||+||+++.+|. +|
T Consensus 168 ~~~~--~~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlKp~NILl~~~~~~~vk 242 (429)
T 3kvw_A 168 FTFR--NHICMTFELLSMNLYELIKKN--KFQGFSLPLVRKFAHSILQCLDALH-KNRIIHCDLKPENILLKQQGRSGIK 242 (429)
T ss_dssp EEET--TEEEEEECCCCCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHH-HHTEECSCCSGGGEEESSTTSCCEE
T ss_pred cccC--CeEEEEEeccCCCHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHeEEccCCCcceE
Confidence 9987 89999999999 898888532 2245899999999999999999999 889999999999999999987 99
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC--------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN-------- 274 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~-------- 274 (852)
|+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|..||.+......
T Consensus 243 L~DFG~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~ 315 (429)
T 3kvw_A 243 VIDFGSSCYEHQ-------RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELL 315 (429)
T ss_dssp ECCCTTCEETTC-------CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred EeecccceecCC-------cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence 999999864321 12245688899999999877899999999999999999999999865432100
Q ss_pred --------------------------------------------------------------cCCCChhHHHHHHHhccC
Q psy3914 275 --------------------------------------------------------------IDNIPENLKRVYLELISE 292 (852)
Q Consensus 275 --------------------------------------------------------------~~~ip~~L~~li~~lL~~ 292 (852)
....++.+.++|++||..
T Consensus 316 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~ 395 (429)
T 3kvw_A 316 GMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEW 395 (429)
T ss_dssp CCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCS
T ss_pred CCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCC
Confidence 012367789999999999
Q ss_pred CCCCCCCHHHHHHhhcCCCCCCcchH
Q psy3914 293 RPNQRPNPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 293 nP~~Rps~~elL~~l~~~~~fF~n~l 318 (852)
||.+|||+.++++| +||+..+
T Consensus 396 dP~~Rpta~e~L~H-----pw~~~~~ 416 (429)
T 3kvw_A 396 DPAVRMTPGQALRH-----PWLRRRL 416 (429)
T ss_dssp STTTSCCHHHHHTS-----TTTC---
T ss_pred ChhhCCCHHHHhCC-----hhhccCC
Confidence 99999999999998 9998754
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=314.56 Aligned_cols=239 Identities=14% Similarity=0.212 Sum_probs=203.0
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
...+|++.+.|| .|+++.||.|..+ ++..|+||++.. ......+.+|+++++.++||||+++++++.+.
T Consensus 6 ~~~~y~~~~~lg--------~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 75 (268)
T 3sxs_A 6 KREEITLLKELG--------SGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE- 75 (268)
T ss_dssp CGGGEEEEEEEE--------EETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred chhheeeeeeec--------cCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccC-
Confidence 445699999999 9999999999876 677899999987 33556789999999999999999999999887
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||+
T Consensus 76 -~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dikp~Nil~~~~~~~~l~Dfg~ 150 (268)
T 3sxs_A 76 -YPIYIVTEYISNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLE-SHQFIHRDLAARNCLVDRDLCVKVSDFGM 150 (268)
T ss_dssp -SSEEEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHH-HTTEEESSCSGGGEEECTTCCEEECCTTC
T ss_pred -CceEEEEEccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCcCcceEEECCCCCEEEccCcc
Confidence 88999999997 699998543 245899999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCc
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNI 275 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~ 275 (852)
+....... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+... ....
T Consensus 151 ~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 227 (268)
T 3sxs_A 151 TRYVLDDQ---YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP 227 (268)
T ss_dssp EEECCTTC---EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC
T ss_pred ceecchhh---hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCC
Confidence 87543221 111223445678999999977778889999999999999999 9999964321 1234
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
..+|+.+.+++.+||..+|.+|||+.+++++++
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (268)
T 3sxs_A 228 HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIE 260 (268)
T ss_dssp TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHG
T ss_pred CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 567899999999999999999999999999864
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-36 Score=333.86 Aligned_cols=236 Identities=16% Similarity=0.244 Sum_probs=199.1
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~~~ 132 (852)
..|++++.|| .|+||.||+|.++.+|+.|+||+++.... ...+|+.+|.++ +||||+++++++++. .
T Consensus 22 ~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~E~~~l~~~~~hp~iv~~~~~~~~~--~ 89 (342)
T 2qr7_A 22 DGYEVKEDIG--------VGSYSVCKRCIHKATNMEFAVKIIDKSKR--DPTEEIEILLRYGQHPNIITLKDVYDDG--K 89 (342)
T ss_dssp HHEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEEETTTC--CCHHHHHHHHHHTTSTTBCCEEEEEECS--S
T ss_pred ccEEEEEEEe--------eCCCEEEEEEEECCCCCEEEEEEEEcccC--ChHHHHHHHHHhcCCCCcCeEEEEEEcC--C
Confidence 3599999999 99999999999999999999999987322 245788888888 799999999999987 9
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC-C---cEEEccc
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC-G---EWKLGGL 206 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~-g---~~KL~DF 206 (852)
.+||||||+. +|.+++.+ .+.+++..+..++.||+.||.||| +.|++||||||+||++... + .+||+||
T Consensus 90 ~~~lv~E~~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH-~~givHrDlkp~NIl~~~~~~~~~~~kl~Df 164 (342)
T 2qr7_A 90 YVYVVTELMKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLH-AQGVVHRDLKPSNILYVDESGNPESIRICDF 164 (342)
T ss_dssp EEEEEECCCCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEESSSSCSGGGEEECCC
T ss_pred EEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCcEeccCCHHHEEEecCCCCcCeEEEEEC
Confidence 9999999997 78888742 357899999999999999999999 8999999999999998543 3 4999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------------- 272 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------------- 272 (852)
|++....... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 165 g~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~ 240 (342)
T 2qr7_A 165 GFAKQLRAEN----GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF 240 (342)
T ss_dssp TTCEECBCTT----CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCC
T ss_pred CCcccCcCCC----CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCc
Confidence 9987543221 1223456899999999997666888999999999999999999999642110
Q ss_pred ----cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 273 ----SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 273 ----~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
.....+++.+.+++++||..||.+||++.++++| +||.
T Consensus 241 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h-----p~~~ 282 (342)
T 2qr7_A 241 SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH-----PWIV 282 (342)
T ss_dssp CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS-----HHHH
T ss_pred ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC-----Ceec
Confidence 0125689999999999999999999999999997 6663
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-36 Score=346.60 Aligned_cols=239 Identities=14% Similarity=0.215 Sum_probs=206.9
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
...+|++.+.|| .|++|.||.|+++.+|+.||||++.. ......+.+|+.+|+.++||||+++++++
T Consensus 24 ~~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 95 (484)
T 3nyv_A 24 FSDRYKGQRVLG--------KGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF 95 (484)
T ss_dssp HHHHEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred ccCceEEeeEEe--------cCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 334699999999 99999999999999999999999976 34567899999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE---ccCCcE
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI---NSCGEW 201 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV---~~~g~~ 201 (852)
++. ..+|+||||+. +|.+++. ....+++..+..++.||+.||.||| +.+++||||||+||++ +.++.+
T Consensus 96 ~~~--~~~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~Dlkp~Nil~~~~~~~~~~ 168 (484)
T 3nyv_A 96 EDK--GYFYLVGEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGITYMH-KNKIVHRDLKPENLLLESKSKDANI 168 (484)
T ss_dssp ECS--SEEEEEECCCCSCBHHHHHH----TCSCCBHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEESSSSTTCCE
T ss_pred EeC--CEEEEEEecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeCCCCHHHEEEecCCCCCcE
Confidence 987 99999999997 7888874 2367999999999999999999999 8999999999999999 567899
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------- 272 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------- 272 (852)
||+|||++..+... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....
T Consensus 169 kl~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~ 242 (484)
T 3nyv_A 169 RIIDFGLSTHFEAS-----KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 242 (484)
T ss_dssp EECCTTHHHHBCCC-----CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred EEEeeeeeEEcccc-----cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC
Confidence 99999999755321 12234568999999999865 5889999999999999999999999654321
Q ss_pred ------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 ------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 ------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....+++.+.++|++||..+|.+|||+.++++| +||+.
T Consensus 243 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h-----~~~~~ 287 (484)
T 3nyv_A 243 KYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH-----EWIQT 287 (484)
T ss_dssp CCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS-----HHHHH
T ss_pred CCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC-----hhhcc
Confidence 2235788999999999999999999999999998 77753
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=337.74 Aligned_cols=241 Identities=15% Similarity=0.035 Sum_probs=184.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC-----chHHHHHHHHHHHhC--CCCCcceEe--
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD-----TYEPALSYVKKLKTL--RHPSILTFL-- 123 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~-----~~~~~~~E~~~Lk~L--rHPnIlk~~-- 123 (852)
...|++++.|| .|++|+||+|+++.+|+.||||++.... ....+++|+++++.| +||||++++
T Consensus 61 ~~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~ 132 (371)
T 3q60_A 61 ERKLKLVEPLR--------VGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRR 132 (371)
T ss_dssp EEEEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------C
T ss_pred ceeeeeeeecc--------CCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhcee
Confidence 34599999999 9999999999999999999999998832 244667775444444 699988755
Q ss_pred -----eeEEcCCC---------------CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHH------HHHHHHHHHHHHH
Q psy3914 124 -----DSVESPSK---------------SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYI------SWGIFQITRALSF 176 (852)
Q Consensus 124 -----d~~e~~~~---------------~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i------~~~l~QI~~aL~f 176 (852)
+++..... ..+||||||+. +|.+++.... ..+....+ .+++.||+.||.|
T Consensus 133 ~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~---~~~~~~~~~~~~vk~~i~~qi~~aL~~ 209 (371)
T 3q60_A 133 LLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD---FVYVFRGDEGILALHILTAQLIRLAAN 209 (371)
T ss_dssp BCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHH---HSCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhc---cccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 55544311 34899999999 8999996432 12333334 5666999999999
Q ss_pred HHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccC--CCCCcchhHHhHHH
Q psy3914 177 LINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS--HVTKCSTDMYGLGI 254 (852)
Q Consensus 177 LH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~--~~~~~~sDIwSLG~ 254 (852)
|| +.+|+||||||+|||++.+|.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||
T Consensus 210 LH-~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~ 281 (371)
T 3q60_A 210 LQ-SKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-------GPASSVPVTYAPREFLNASTATFTHALNAWQLGL 281 (371)
T ss_dssp HH-HTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE-------EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHH
T ss_pred HH-HCCCccCcCCHHHEEECCCCCEEEEecceeeecCCC-------ccCccCCcCCcChhhccCCCCCcCccccHHHHHH
Confidence 99 899999999999999999999999999998754321 113445689999999966 67899999999999
Q ss_pred HHHHHHhCCCCCCCCccc--------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCC
Q psy3914 255 LIWEVFNGPLQSTNRKSL--------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYF 314 (852)
Q Consensus 255 ll~el~tG~~pf~~~~~l--------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF 314 (852)
++|+|++|..||.+.... .....+|+.+.+++.+||..||.+||++.++++| +||
T Consensus 282 il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h-----p~f 356 (371)
T 3q60_A 282 SIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET-----PEF 356 (371)
T ss_dssp HHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS-----HHH
T ss_pred HHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC-----HHH
Confidence 999999999999654110 1124789999999999999999999999999997 788
Q ss_pred cch
Q psy3914 315 KND 317 (852)
Q Consensus 315 ~n~ 317 (852)
++.
T Consensus 357 ~~~ 359 (371)
T 3q60_A 357 LQL 359 (371)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-36 Score=329.05 Aligned_cols=244 Identities=14% Similarity=0.141 Sum_probs=203.9
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEc-----CCCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEe
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK-----GSNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFL 123 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k-----~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~ 123 (852)
...+|++++.|| .|++|.||+|+++ .++..|+||++.... ....+.+|+.+++.++||||++++
T Consensus 45 ~~~~~~~~~~lg--------~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~ 116 (343)
T 1luf_A 45 PRNNIEYVRDIG--------EGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLL 116 (343)
T ss_dssp CGGGCEEEEEEE--------ECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred cHHHCeeeeeee--------ecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 345699999999 9999999999997 355899999998632 345688999999999999999999
Q ss_pred eeEEcCCCCeEEEEEeecc--cHHHHHHhhhh--------------------cCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q psy3914 124 DSVESPSKSLVYLAVEYVE--PIFYHLDNTLK--------------------ENNEKKQIYISWGIFQITRALSFLINDA 181 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~--------------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~ 181 (852)
+++.+. +.+|+||||+. +|.+++..... ....+++..+..++.||+.||.||| +.
T Consensus 117 ~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH-~~ 193 (343)
T 1luf_A 117 GVCAVG--KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS-ER 193 (343)
T ss_dssp EEECSS--SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH-HT
T ss_pred EEEccC--CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH-hC
Confidence 999987 88999999997 79999964311 1257899999999999999999999 89
Q ss_pred CceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh
Q psy3914 182 DLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN 261 (852)
Q Consensus 182 ~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t 261 (852)
+++||||||+||+++.+|.+||+|||++........ ........+|+.|+|||++.+..++.++|||||||++|+|++
T Consensus 194 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t 271 (343)
T 1luf_A 194 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY--YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271 (343)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGC--BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred CeecCCCCcceEEECCCCeEEEeecCCCcccccCcc--ccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHh
Confidence 999999999999999999999999999875533211 112223457889999999977778999999999999999999
Q ss_pred -CCCCCCCCcc------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 262 -GPLQSTNRKS------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 262 -G~~pf~~~~~------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
|..||.+... ......+|+.+.+++++||..+|.+||++.+++++++
T Consensus 272 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~ 331 (343)
T 1luf_A 272 YGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 331 (343)
T ss_dssp TTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHH
Confidence 9999965422 1234678999999999999999999999999998764
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-36 Score=336.61 Aligned_cols=234 Identities=17% Similarity=0.231 Sum_probs=198.5
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|.+++.|| .|++|+||+|.++.+|+.|+||++... .....+.+|+.+++.++||||+++++++...
T Consensus 42 ~~y~~~~~lG--------~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 113 (371)
T 4exu_A 42 KTYVSPTHVG--------SGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPA 113 (371)
T ss_dssp TTEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred ccEEEEeEEe--------cCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheecc
Confidence 3599999999 999999999999999999999999862 1245678999999999999999999999876
Q ss_pred CCCe------EEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 130 SKSL------VYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 130 ~~~~------~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
.. +|+||||+. +|..++. ..+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+|
T Consensus 114 --~~~~~~~~~~lv~e~~~~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dikp~NIll~~~~~~k 184 (371)
T 4exu_A 114 --SSLRNFYDFYLVMPFMQTDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIH-SAGVVHRDLKPGNLAVNEDCELK 184 (371)
T ss_dssp --SSSTTCCCCEEEEECCCEEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTCCEE
T ss_pred --CCcccceeEEEEEccccccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH-HCCCcCCCcCHHHeEECCCCCEE
Confidence 43 399999999 7777662 45899999999999999999999 89999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc--------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS-------- 273 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~-------- 273 (852)
|+|||++...... .....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.....
T Consensus 185 L~Dfg~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 257 (371)
T 4exu_A 185 ILDFGLARHADAE-------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 257 (371)
T ss_dssp ECSTTCC---------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred EEecCcccccccC-------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 9999998754321 223567889999999855 778999999999999999999999996543110
Q ss_pred ----------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 ----------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ----------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++++||..||.+|||+.++++| +||+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h-----p~f~~ 329 (371)
T 4exu_A 258 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH-----PFFEP 329 (371)
T ss_dssp HCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS-----GGGTT
T ss_pred hCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC-----ccccc
Confidence 123568899999999999999999999999998 88864
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-36 Score=333.78 Aligned_cols=243 Identities=15% Similarity=0.206 Sum_probs=201.8
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEE-----EcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEe
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGK-----KKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFL 123 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~-----~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~ 123 (852)
...+|++++.|| .|+||+||+|+ +..++..|+||++... .....+.+|+.+++.++||||++++
T Consensus 69 ~~~~~~~~~~LG--------~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~ 140 (367)
T 3l9p_A 69 PRKNITLIRGLG--------HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI 140 (367)
T ss_dssp CGGGEEEEEECC--------CCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CHhHeEEeeEee--------eCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEE
Confidence 445699999999 99999999999 4557889999999762 2334678899999999999999999
Q ss_pred eeEEcCCCCeEEEEEeecc--cHHHHHHhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC
Q psy3914 124 DSVESPSKSLVYLAVEYVE--PIFYHLDNTLK---ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC 198 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~---~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~ 198 (852)
+++.+. ...||||||+. +|.+++..... ....++...+..++.||+.||.||| +.||+||||||+||+++.+
T Consensus 141 ~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~ 217 (367)
T 3l9p_A 141 GVSLQS--LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCP 217 (367)
T ss_dssp EEECSS--SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEESCS
T ss_pred EEEecC--CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH-hCCeeCCCCChhhEEEecC
Confidence 999987 88999999996 79999964321 2245899999999999999999999 8999999999999999966
Q ss_pred Cc---EEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc---
Q psy3914 199 GE---WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS--- 271 (852)
Q Consensus 199 g~---~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~--- 271 (852)
|. +||+|||+++.+..... ........+|+.|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 218 ~~~~~~kL~DFG~a~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~ 295 (367)
T 3l9p_A 218 GPGRVAKIGDFGMARDIYRAGY--YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 295 (367)
T ss_dssp STTCCEEECCCHHHHHHHHHSS--CTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred CCCceEEECCCccccccccccc--cccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 54 99999999985433221 122234567889999999977789999999999999999998 9999965422
Q ss_pred ---------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 ---------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 ---------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|..+.+++.+||+.+|.+||++.++++++
T Consensus 296 ~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l 340 (367)
T 3l9p_A 296 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 340 (367)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 233467899999999999999999999999999985
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=318.56 Aligned_cols=236 Identities=17% Similarity=0.233 Sum_probs=197.0
Q ss_pred cccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeEEEEE
Q psy3914 61 PAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAV 138 (852)
Q Consensus 61 ~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~yIVt 138 (852)
.|| .|++|.||+|++..++..|+||++.. ....+.+.+|+.+++.++||||+++++++... +.+|+||
T Consensus 29 ~lg--------~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~ 98 (295)
T 2clq_A 29 VLG--------KGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN--GFIKIFM 98 (295)
T ss_dssp EEE--------ECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEET--TEEEEEE
T ss_pred EEe--------ecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeC--CcEEEEE
Confidence 788 89999999999999999999999987 33457789999999999999999999999987 8999999
Q ss_pred eecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc-CCcEEEcccchhhccccc
Q psy3914 139 EYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS-CGEWKLGGLEYMEKISEA 215 (852)
Q Consensus 139 E~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~-~g~~KL~DFg~a~~~~~~ 215 (852)
||+. +|.+++... .....+++..+..++.||+.||.||| +.+++||||+|+||+++. +|.+||+|||++......
T Consensus 99 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~ 176 (295)
T 2clq_A 99 EQVPGGSLSALLRSK-WGPLKDNEQTIGFYTKQILEGLKYLH-DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI 176 (295)
T ss_dssp ECCSEEEHHHHHHHT-TCCCTTCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred EeCCCCCHHHHHHhh-ccCCCccHHHHHHHHHHHHHHHHHHH-hCCEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence 9996 799998532 22345678899999999999999999 899999999999999998 899999999998754321
Q ss_pred cCCCCcccccccCCCcccCCccccC--CCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------ccCcCCCC
Q psy3914 216 SCIPMKRYSRYEDQSTYQIPENSLS--HVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------LSNIDNIP 279 (852)
Q Consensus 216 ~~~~~~~~~~~~gt~~Y~APE~~~~--~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------l~~~~~ip 279 (852)
. .......|++.|+|||++.+ ..++.++|||||||++|+|++|..||.+... ......++
T Consensus 177 ~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (295)
T 2clq_A 177 N----PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMS 252 (295)
T ss_dssp --------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSC
T ss_pred C----CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCC
Confidence 1 11224567889999999843 3478899999999999999999999953211 12245788
Q ss_pred hhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 280 ENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 280 ~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
+.+.+++.+||..||.+||++.++++| +||+..
T Consensus 253 ~~~~~li~~~l~~dp~~Rps~~~ll~~-----~~~~~~ 285 (295)
T 2clq_A 253 AEAKAFILKCFEPDPDKRACANDLLVD-----EFLKVS 285 (295)
T ss_dssp HHHHHHHHHTTCSSTTTSCCHHHHHTS-----GGGCC-
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcC-----hhhhhc
Confidence 999999999999999999999999997 888653
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=324.00 Aligned_cols=241 Identities=19% Similarity=0.242 Sum_probs=200.6
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEc-CCCeEEEEEEEeC----CCchHHHHHHHHHHHhC---CCCCcceEee
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK-GSNEKVTIFLNDS----ADTYEPALSYVKKLKTL---RHPSILTFLD 124 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k-~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~L---rHPnIlk~~d 124 (852)
..+|++.+.|| .|++|.||+|++. .+|+.|+||++.. ......+.+|+.+++.+ +||||+++++
T Consensus 10 ~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~ 81 (326)
T 1blx_A 10 DQQYECVAEIG--------EGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFD 81 (326)
T ss_dssp GGTEEEEEEEE--------EETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEE
T ss_pred hhceeeeeeec--------ccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeee
Confidence 45699999999 9999999999995 6789999999875 12223456677666655 8999999999
Q ss_pred eEE-----cCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC
Q psy3914 125 SVE-----SPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC 198 (852)
Q Consensus 125 ~~e-----~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~ 198 (852)
++. .. ..+|+||||+. +|.+++... ....+++..+..++.||+.||.||| ..|++||||||+||+++.+
T Consensus 82 ~~~~~~~~~~--~~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH-~~gi~H~dlkp~Nili~~~ 156 (326)
T 1blx_A 82 VCTVSRTDRE--TKLTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLH-SHRVVHRDLKPQNILVTSS 156 (326)
T ss_dssp EEEEEECSSE--EEEEEEEECCSCBHHHHHHHS--CTTCSCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTT
T ss_pred eeeecccCCC--ceEEEEEecCCCCHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCHHHeEEcCC
Confidence 987 33 78999999999 899988532 2245899999999999999999999 8999999999999999999
Q ss_pred CcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------
Q psy3914 199 GEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------ 272 (852)
Q Consensus 199 g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------ 272 (852)
|.+||+|||++...... .......+++.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 157 ~~~kl~Dfg~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i 231 (326)
T 1blx_A 157 GQIKLADFGLARIYSFQ-----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 231 (326)
T ss_dssp CCEEECSCCSCCCCCGG-----GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred CCEEEecCcccccccCC-----CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 99999999998754321 1223456788999999998788999999999999999999999999653211
Q ss_pred --------------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 --------------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 --------------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....++..+.+++.+||..||.+||++.++++| +||++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h-----p~~~~ 302 (326)
T 1blx_A 232 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH-----PYFQD 302 (326)
T ss_dssp HHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS-----GGGTT
T ss_pred HHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC-----ccccc
Confidence 0124688899999999999999999999999997 78854
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=315.30 Aligned_cols=238 Identities=13% Similarity=0.191 Sum_probs=200.2
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
...+|++.+.|| .|++|.||.|..+ ++..|+||++.. ......+.+|+++++.++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lg--------~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 91 (283)
T 3gen_A 22 DPKDLTFLKELG--------TGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ- 91 (283)
T ss_dssp CGGGEEEEEECC-----------CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSS-
T ss_pred CHHHHHhHhhcC--------CCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecC-
Confidence 445699999999 9999999999886 678899999987 33557789999999999999999999999987
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
+.+|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||+
T Consensus 92 -~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dikp~Nili~~~~~~kl~Dfg~ 166 (283)
T 3gen_A 92 -RPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLE-SKQFLHRDLAARNCLVNDQGVVKVSDFGL 166 (283)
T ss_dssp -SSEEEEECCCTTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSSCSGGGEEECTTSCEEECSTTG
T ss_pred -CCeEEEEeccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHH-HCCccCCCCccceEEEcCCCCEEEccccc
Confidence 88999999997 799998532 256899999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCc
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNI 275 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~ 275 (852)
+........ .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+... ....
T Consensus 167 ~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~ 243 (283)
T 3gen_A 167 SRYVLDDEY---TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP 243 (283)
T ss_dssp GGGBCCHHH---HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC
T ss_pred ccccccccc---ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCC
Confidence 875433211 11123445678999999977778999999999999999998 9999964321 1234
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
..+++.+.+++.+||+.+|.+||++.++++++
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L 275 (283)
T 3gen_A 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNI 275 (283)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred CcCCHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence 56789999999999999999999999999985
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=323.27 Aligned_cols=238 Identities=16% Similarity=0.238 Sum_probs=200.2
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----------CchHHHHHHHHHHHhCCCCCcceEee
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----------DTYEPALSYVKKLKTLRHPSILTFLD 124 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----------~~~~~~~~E~~~Lk~LrHPnIlk~~d 124 (852)
+|++.+.|| .|++|.||+|+++.+++.|+||++... .....+.+|+++|+.++||||+++++
T Consensus 11 ~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 82 (322)
T 2ycf_A 11 EYIMSKTLG--------SGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKN 82 (322)
T ss_dssp HEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEE
T ss_pred ceeEeeEEe--------cCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEee
Confidence 599999999 999999999999999999999999752 12235789999999999999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc--
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE-- 200 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~-- 200 (852)
+++.. . +|+||||+. +|.+++. ....+++..+..++.||+.||.||| +.+++||||||+||+++.++.
T Consensus 83 ~~~~~--~-~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~dlkp~NIl~~~~~~~~ 154 (322)
T 2ycf_A 83 FFDAE--D-YYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLH-ENGIIHRDLKPENVLLSSQEEDC 154 (322)
T ss_dssp EEESS--S-EEEEEECCTTEETHHHHS----TTCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEESSSSSSC
T ss_pred EEcCC--c-eEEEEecCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCCHHHEEEecCCCCC
Confidence 99865 4 899999997 7888873 3467899999999999999999999 899999999999999988665
Q ss_pred -EEEcccchhhccccccCCCCcccccccCCCcccCCccc---cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc---
Q psy3914 201 -WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENS---LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--- 273 (852)
Q Consensus 201 -~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~---~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--- 273 (852)
+||+|||++...... .......||+.|+|||++ ....++.++|||||||++|+|++|..||.+.....
T Consensus 155 ~~kl~Dfg~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 229 (322)
T 2ycf_A 155 LIKITDFGHSKILGET-----SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 229 (322)
T ss_dssp CEEECCCTTCEECCCC-----HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHH
T ss_pred eEEEccCccceecccc-----cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHH
Confidence 999999998754321 112235688899999996 35678889999999999999999999996432211
Q ss_pred -------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchH
Q psy3914 274 -------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 274 -------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~l 318 (852)
....+++.+.+++.+||..||.+||++.++++| +||.+..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h-----~~~~~~~ 282 (322)
T 2ycf_A 230 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH-----PWLQDED 282 (322)
T ss_dssp HHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS-----GGGCCHH
T ss_pred HHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC-----cCcCCHH
Confidence 124678999999999999999999999999997 8997653
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=320.30 Aligned_cols=239 Identities=16% Similarity=0.192 Sum_probs=194.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.+|++.+.|| .|++|.||+|.+..+|..|+||++.. ......+.+|+.+++.++||||+++++++..
T Consensus 32 ~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 103 (310)
T 2wqm_A 32 ANFRIEKKIG--------RGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE 103 (310)
T ss_dssp GGEEEEEEEE--------CC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred cceEEEEeec--------CCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc
Confidence 3599999999 99999999999999999999999975 1234567899999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. +.+|+||||+. +|.+++.........+++..+..++.||+.||.||| +.+++||||+|+||+++.+|.+||+||
T Consensus 104 ~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH-~~~i~H~dl~p~NIl~~~~~~~kl~Df 180 (310)
T 2wqm_A 104 D--NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH-SRRVMHRDIKPANVFITATGVVKLGDL 180 (310)
T ss_dssp T--TEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred C--CcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh-hCCeeCCCCcHHHEEEcCCCCEEEEec
Confidence 7 89999999998 799998655555677999999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------------- 272 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------------- 272 (852)
|++....... .......+++.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 181 g~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 256 (310)
T 2wqm_A 181 GLGRFFSSKT----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP 256 (310)
T ss_dssp ----------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSC
T ss_pred cceeeecCCC----ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCC
Confidence 9987543221 1122346788999999998888899999999999999999999998543210
Q ss_pred -cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 273 -SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 273 -~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.....+|+.+.+++.+||..||.+||++.++++.+
T Consensus 257 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l 292 (310)
T 2wqm_A 257 PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVA 292 (310)
T ss_dssp CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 01256889999999999999999999999999874
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=318.21 Aligned_cols=240 Identities=14% Similarity=0.208 Sum_probs=206.4
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
...+|++.+.|| .|++++||.|.++.++..|+||++.. ....+.+.+|+++++.++||||+++++++.+.
T Consensus 11 ~~~~~~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 81 (288)
T 3kfa_A 11 ERTDITMKHKLG--------GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE- 81 (288)
T ss_dssp CGGGEEEEEESG--------GGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred cccceeEEeecC--------CCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC-
Confidence 445699999999 99999999999999999999999987 34557789999999999999999999999987
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+|+||||+. +|.+++... ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||+
T Consensus 82 -~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH-~~~i~H~dikp~Nil~~~~~~~~l~Dfg~ 157 (288)
T 3kfa_A 82 -PPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE-KKNFIHRDLAARNCLVGENHLVKVADFGL 157 (288)
T ss_dssp -SSEEEEEECCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHH-HHTCCCSCCSGGGEEECGGGCEEECCCCG
T ss_pred -CCEEEEEEcCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHH-HCCccCCCCCcceEEEcCCCCEEEccCcc
Confidence 88999999997 799998532 2356899999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCc
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNI 275 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~ 275 (852)
+....... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+... ....
T Consensus 158 ~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 3kfa_A 158 SRLMTGDT---YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 234 (288)
T ss_dssp GGTSCSSS---SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCC
T ss_pred ceeccCCc---cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCC
Confidence 87543221 112223456778999999977788999999999999999999 8999864322 2234
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
..+|+.+.+++++||..||.+||++.++++.+
T Consensus 235 ~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l 266 (288)
T 3kfa_A 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266 (288)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHH
Confidence 67899999999999999999999999999864
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-36 Score=331.72 Aligned_cols=243 Identities=17% Similarity=0.278 Sum_probs=201.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEE-----EcCCCeEEEEEEEeCCC---chHHHHHHHHHHHhC-CCCCcceEee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGK-----KKGSNEKVTIFLNDSAD---TYEPALSYVKKLKTL-RHPSILTFLD 124 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~-----~k~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~L-rHPnIlk~~d 124 (852)
.+|++++.|| .|++|.||+|+ +..+++.|+||++.... ....+.+|+++++.+ +||||+++++
T Consensus 22 ~~y~~~~~lG--------~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~ 93 (359)
T 3vhe_A 22 DRLKLGKPLG--------RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 93 (359)
T ss_dssp GGEEEEEEEE--------ECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cceeeceeec--------CCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeee
Confidence 4699999999 99999999999 55677999999998732 234688999999999 7999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhhc------------------------------------------------
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLKE------------------------------------------------ 154 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~------------------------------------------------ 154 (852)
++.+. ...+|+||||+. +|.+++......
T Consensus 94 ~~~~~-~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 94 ACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EECST-TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeecC-CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 98874 255999999998 799999643210
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCC
Q psy3914 155 --------------NNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPM 220 (852)
Q Consensus 155 --------------~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~ 220 (852)
...+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||++....... ..
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH-~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~--~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP--DY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT--TC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH-HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccc--cc
Confidence 122889999999999999999999 8999999999999999999999999999987543221 11
Q ss_pred cccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-------------ccCcCCCChhHHHHH
Q psy3914 221 KRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS-------------LSNIDNIPENLKRVY 286 (852)
Q Consensus 221 ~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~-------------l~~~~~ip~~L~~li 286 (852)
.......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+... ......+++.+.+++
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 329 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 329 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHH
T ss_pred hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 22234567889999999977888999999999999999998 9999965432 223457889999999
Q ss_pred HHhccCCCCCCCCHHHHHHhhc
Q psy3914 287 LELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 287 ~~lL~~nP~~Rps~~elL~~l~ 308 (852)
.+||..||.+||++.+++++++
T Consensus 330 ~~~l~~dP~~Rps~~ell~~L~ 351 (359)
T 3vhe_A 330 LDCWHGEPSQRPTFSELVEHLG 351 (359)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHccCChhhCCCHHHHHHHHH
Confidence 9999999999999999999853
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=338.47 Aligned_cols=240 Identities=15% Similarity=0.229 Sum_probs=196.0
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----------CchHHHHHHHHHHHhCCCCCcceEe
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----------DTYEPALSYVKKLKTLRHPSILTFL 123 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----------~~~~~~~~E~~~Lk~LrHPnIlk~~ 123 (852)
.+|.+.+.|| .|++|+||+|.++.+++.||||++... .....+.+|+++|++++||||++++
T Consensus 135 ~~y~~~~~LG--------~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 206 (419)
T 3i6u_A 135 DEYIMSKTLG--------SGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIK 206 (419)
T ss_dssp TTEEEEEEEE--------ECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCC
T ss_pred ccEEEEeEEe--------eCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEE
Confidence 4699999999 999999999999999999999999761 1122478999999999999999999
Q ss_pred eeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC--
Q psy3914 124 DSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG-- 199 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g-- 199 (852)
++++. ..+||||||+. +|.+++ .....+++..+..++.||+.||.||| +.+++||||||+||+++.++
T Consensus 207 ~~~~~---~~~~lv~e~~~~g~L~~~l----~~~~~~~~~~~~~i~~qi~~~l~~LH-~~~ivHrDlkp~NIll~~~~~~ 278 (419)
T 3i6u_A 207 NFFDA---EDYYIVLELMEGGELFDKV----VGNKRLKEATCKLYFYQMLLAVQYLH-ENGIIHRDLKPENVLLSSQEED 278 (419)
T ss_dssp EEEES---SEEEEEEECCTTCBGGGGT----SSSCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEESSSSSS
T ss_pred EEEec---CceEEEEEcCCCCcHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCChHhEEEecCCCc
Confidence 99875 46899999997 677666 33467999999999999999999999 89999999999999997655
Q ss_pred -cEEEcccchhhccccccCCCCcccccccCCCcccCCcccc---CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc--
Q psy3914 200 -EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL---SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS-- 273 (852)
Q Consensus 200 -~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~-- 273 (852)
.+||+|||++...... .......||+.|+|||++. ...++.++|||||||++|+|++|..||.+.....
T Consensus 279 ~~~kl~DFG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~ 353 (419)
T 3i6u_A 279 CLIKITDFGHSKILGET-----SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 353 (419)
T ss_dssp CCEEECCSSTTTSCC----------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCH
T ss_pred ceEEEeecccceecCCC-----ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHH
Confidence 4999999999754321 1223467899999999984 4567889999999999999999999996432211
Q ss_pred --------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchHH
Q psy3914 274 --------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLI 319 (852)
Q Consensus 274 --------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~lv 319 (852)
....+++.+.+++++||..||.+||++.++++| +||++.-.
T Consensus 354 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h-----p~~~~~~~ 408 (419)
T 3i6u_A 354 KDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH-----PWLQDEDM 408 (419)
T ss_dssp HHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS-----GGGCCHHH
T ss_pred HHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC-----cccCChhH
Confidence 124678999999999999999999999999998 99987543
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-36 Score=323.83 Aligned_cols=243 Identities=17% Similarity=0.237 Sum_probs=198.3
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEE----EcCCCeEEEEEEEeCC--CchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGK----KKGSNEKVTIFLNDSA--DTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~----~k~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
...+|++.+.|| .|++|+||.|+ +..+++.|+||++... .....+.+|+++|+.++||||++++++
T Consensus 8 ~~~~~~~~~~lg--------~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 79 (295)
T 3ugc_A 8 EERHLKFLQQLG--------KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 79 (295)
T ss_dssp CGGGEEEEEEEE--------ECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred CHHHhhhhheee--------ccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 345699999999 99999999998 5678999999999863 234578899999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+.......+|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||
T Consensus 80 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~Dikp~Nil~~~~~~~kl 155 (295)
T 3ugc_A 80 CYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKI 155 (295)
T ss_dssp ECHHHHTSCEEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEEEETTEEEE
T ss_pred EecCCCCceEEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHh-cCCcccCCCCHhhEEEcCCCeEEE
Confidence 86543356999999997 799998542 235899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-------------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK------------- 270 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~------------- 270 (852)
+|||++......... ........++..|+|||++.+..++.++|||||||++|+|++|..|+....
T Consensus 156 ~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~ 234 (295)
T 3ugc_A 156 GDFGLTKVLPQDKEF-FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 234 (295)
T ss_dssp CCCCSCC--------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCT
T ss_pred ccCcccccccCCcce-eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCcccc
Confidence 999998755332111 111223345667999999977788999999999999999999988874321
Q ss_pred ---------------cccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 271 ---------------SLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 271 ---------------~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.......+|+.+.+++.+||..||.+|||+.++++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L 286 (295)
T 3ugc_A 235 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286 (295)
T ss_dssp HHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred chhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 1123457899999999999999999999999999874
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-36 Score=339.11 Aligned_cols=242 Identities=15% Similarity=0.240 Sum_probs=199.2
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC--
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPS-- 130 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~-- 130 (852)
..+|++.+.|| .|+||+||.|+++.++. |+||++.... ....+|+++|+.++||||+++++++....
T Consensus 39 ~~~Y~~~~~lG--------~G~~g~V~~a~~~~~~~-~aikk~~~~~--~~~~~E~~il~~l~h~niv~l~~~~~~~~~~ 107 (394)
T 4e7w_A 39 EIAYTNCKVIG--------NGSFGVVFQAKLVESDE-VAIKKVLQDK--RFKNRELQIMRIVKHPNVVDLKAFFYSNGDK 107 (394)
T ss_dssp EEEEEEEEEEE--------EETTEEEEEEEETTTEE-EEEEEEECCT--TSCCHHHHHHHTCCCTTBCCEEEEEEEESSS
T ss_pred cceEEEeEEEe--------eCCCeEEEEEEECCCCe-EEEEEEecCc--chHHHHHHHHHhCCCCCcceEEEEEEecCCC
Confidence 34699999999 99999999999987766 8888776522 22347999999999999999999986531
Q ss_pred --CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEc-cCCcEEEccc
Q psy3914 131 --KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN-SCGEWKLGGL 206 (852)
Q Consensus 131 --~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~-~~g~~KL~DF 206 (852)
..++|+||||+. +|...+.........+++..++.+++||+.||.||| +.||+||||||+||+++ .+|.+||+||
T Consensus 108 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp~Nill~~~~~~~kL~DF 186 (394)
T 4e7w_A 108 KDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH-SIGICHRDIKPQNLLLDPPSGVLKLIDF 186 (394)
T ss_dssp SSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEETTTTEEEECCC
T ss_pred CCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH-HCCccCCCCCHHHEEEcCCCCcEEEeeC
Confidence 134899999999 676666555555678999999999999999999999 89999999999999999 7999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------ 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------ 273 (852)
|+++...... ......+|+.|+|||++.+ ..++.++|||||||++|||++|..||.+.....
T Consensus 187 G~a~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p 261 (394)
T 4e7w_A 187 GSAKILIAGE-----PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTP 261 (394)
T ss_dssp TTCEECCTTC-----CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred CCcccccCCC-----CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 9987542211 1224567889999999844 468999999999999999999999997543210
Q ss_pred ----------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 ----------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ----------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++.+||..||.+|||+.++++| +||+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h-----p~f~~ 327 (394)
T 4e7w_A 262 SREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH-----PFFDE 327 (394)
T ss_dssp CHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS-----GGGST
T ss_pred CHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC-----hhhhh
Confidence 012478899999999999999999999999997 88864
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=341.97 Aligned_cols=238 Identities=15% Similarity=0.199 Sum_probs=202.2
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
..|++++.|| .|++|+||+|+++.++..|+||++.. ......+.+|+.+|+.++||||+++++++++.
T Consensus 37 ~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 108 (494)
T 3lij_A 37 EMYQRVKKLG--------SGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDK 108 (494)
T ss_dssp HHEEEEEEEE--------CC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cCeEEeeEEe--------cCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC
Confidence 3599999999 99999999999999999999999986 33457789999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC---CcEEEc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC---GEWKLG 204 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~---g~~KL~ 204 (852)
..+||||||+. +|.+++... ..+++..+..++.||+.||.||| +.||+||||||+||+++.. +.+||+
T Consensus 109 --~~~~lv~e~~~~g~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 181 (494)
T 3lij_A 109 --RNYYLVMECYKGGELFDEIIHR----MKFNEVDAAVIIKQVLSGVTYLH-KHNIVHRDLKPENLLLESKEKDALIKIV 181 (494)
T ss_dssp --SEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred --CEEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCChhhEEEeCCCCCCcEEEE
Confidence 89999999998 788877432 57899999999999999999999 8999999999999999764 459999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------ 272 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------ 272 (852)
|||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....
T Consensus 182 DfG~a~~~~~~-----~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~ 255 (494)
T 3lij_A 182 DFGLSAVFENQ-----KKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT 255 (494)
T ss_dssp CCTTCEECBTT-----BCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred ECCCCeECCCC-----ccccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence 99998754321 12234578999999999853 5889999999999999999999999654321
Q ss_pred ---cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 ---SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 ---~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....+++.+.+++++||..+|.+|||+.++++| +||+..
T Consensus 256 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h-----p~~~~~ 298 (494)
T 3lij_A 256 FDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH-----PWIKEM 298 (494)
T ss_dssp CCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC-----HHHHHH
T ss_pred CCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC-----cccccC
Confidence 1235789999999999999999999999999997 787653
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-35 Score=341.00 Aligned_cols=238 Identities=16% Similarity=0.216 Sum_probs=204.0
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---------------CchHHHHHHHHHHHhCCC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---------------DTYEPALSYVKKLKTLRH 116 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---------------~~~~~~~~E~~~Lk~LrH 116 (852)
....|++++.|| .|++|+||.|+++.+++.||||++... ...+.+.+|+.+|+.|+|
T Consensus 34 i~~~Y~~~~~lG--------~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 105 (504)
T 3q5i_A 34 IGESYFKVRKLG--------SGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDH 105 (504)
T ss_dssp GGGTEEEEEEEE--------C--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCC
T ss_pred cccceEEEeEec--------ccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCC
Confidence 445699999999 999999999999999999999999861 345678999999999999
Q ss_pred CCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEE
Q psy3914 117 PSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIF 194 (852)
Q Consensus 117 PnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIl 194 (852)
|||+++++++++. ..+||||||+. +|.+++.. ...+++..+..++.||+.||.||| +.+++||||||+||+
T Consensus 106 pniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~Dlkp~Nil 178 (504)
T 3q5i_A 106 PNIIKLFDVFEDK--KYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGICYLH-KHNIVHRDIKPENIL 178 (504)
T ss_dssp TTBCCEEEEEECS--SEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEE
T ss_pred CCCCeEEEEEEcC--CEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeCCCcHHHEE
Confidence 9999999999987 99999999997 78888743 257999999999999999999999 899999999999999
Q ss_pred EccCC---cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc
Q psy3914 195 INSCG---EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS 271 (852)
Q Consensus 195 V~~~g---~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~ 271 (852)
++.+| .+||+|||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+...
T Consensus 179 ~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 252 (504)
T 3q5i_A 179 LENKNSLLNIKIVDFGLSSFFSKD-----YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQND 252 (504)
T ss_dssp ESSTTCCSSEEECCCTTCEECCTT-----SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred EecCCCCccEEEEECCCCEEcCCC-----CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99876 6999999998754321 12234568999999999864 588999999999999999999999965432
Q ss_pred c---------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 272 L---------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 272 l---------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
. .....+|+.+.+++++||..||.+|||+.++++| +||+
T Consensus 253 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h-----~~~~ 306 (504)
T 3q5i_A 253 QDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS-----RWIK 306 (504)
T ss_dssp HHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS-----HHHH
T ss_pred HHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC-----Hhhh
Confidence 1 1125789999999999999999999999999998 6764
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-35 Score=328.24 Aligned_cols=237 Identities=15% Similarity=0.260 Sum_probs=203.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC----------chHHHHHHHHHHHhC-CCCCcceE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD----------TYEPALSYVKKLKTL-RHPSILTF 122 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~----------~~~~~~~E~~~Lk~L-rHPnIlk~ 122 (852)
.+|++.+.|| .|++|.||+|+++.+|+.|+||++.... ..+.+.+|+.+++.+ +||||+++
T Consensus 94 ~~y~~~~~lg--------~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 94 QKYDPKDVIG--------RGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred hhcccceEEe--------cCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3599999999 9999999999999999999999998622 145678999999999 79999999
Q ss_pred eeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc
Q psy3914 123 LDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE 200 (852)
Q Consensus 123 ~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~ 200 (852)
+++++.. +..|+||||+. +|.+++.. ...+++..+..++.||+.||.||| +.|++||||||+||+++.+|.
T Consensus 166 ~~~~~~~--~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH-~~gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 166 IDSYESS--SFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLH-ANNIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp EEEEEBS--SEEEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTCC
T ss_pred EEEEeeC--CEEEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEECCCCC
Confidence 9999987 89999999997 79988843 257899999999999999999999 899999999999999999999
Q ss_pred EEEcccchhhccccccCCCCcccccccCCCcccCCcccc------CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-
Q psy3914 201 WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL------SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS- 273 (852)
Q Consensus 201 ~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~------~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~- 273 (852)
+||+|||++..+... .......||+.|+|||++. ...++.++|||||||++|+|++|..||.+.....
T Consensus 239 ikl~DfG~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 313 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPG-----EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILM 313 (365)
T ss_dssp EEECCCTTCEECCTT-----CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred EEEEecCcccccCCC-----cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHH
Confidence 999999998754321 1223467899999999973 3357889999999999999999999996542211
Q ss_pred --------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 274 --------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 274 --------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
....++..+.+++++||..||.+||++.++++| +||+
T Consensus 314 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h-----p~f~ 364 (365)
T 2y7j_A 314 LRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH-----PFFE 364 (365)
T ss_dssp HHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS-----GGGC
T ss_pred HHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC-----cccC
Confidence 124678889999999999999999999999998 8885
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=324.52 Aligned_cols=244 Identities=13% Similarity=0.178 Sum_probs=188.4
Q ss_pred CCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCe---EEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEe
Q psy3914 51 SKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE---KVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFL 123 (852)
Q Consensus 51 ~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~---~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~ 123 (852)
....+|++++.|| .|++|+||+|+++.++. .|+||++.. ....+.+.+|+++++.++||||++++
T Consensus 20 i~~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 91 (323)
T 3qup_A 20 IPEQQFTLGRMLG--------KGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLV 91 (323)
T ss_dssp CC---CEEEEEEE--------EETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCC
T ss_pred cChhHeEEeceec--------ccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhh
Confidence 4556799999999 99999999999887775 899999876 23456788999999999999999999
Q ss_pred eeEEcCCCCeE------EEEEeecc--cHHHHHHhhhh--cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCE
Q psy3914 124 DSVESPSKSLV------YLAVEYVE--PIFYHLDNTLK--ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSI 193 (852)
Q Consensus 124 d~~e~~~~~~~------yIVtE~v~--~L~~~L~~~~~--~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NI 193 (852)
+++... ... |+||||+. +|.+++..... ....+++..+..++.||+.||.||| +.+++||||||+||
T Consensus 92 ~~~~~~--~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH-~~~ivH~Dikp~NI 168 (323)
T 3qup_A 92 GVSLRS--RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS-SRNFIHRDLAARNC 168 (323)
T ss_dssp EEEECC---------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGE
T ss_pred ceeecc--ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH-cCCcccCCCCcceE
Confidence 999876 433 99999998 79998854321 2226899999999999999999999 89999999999999
Q ss_pred EEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-
Q psy3914 194 FINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS- 271 (852)
Q Consensus 194 lV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~- 271 (852)
+++.+|.+||+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 169 li~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~ 246 (323)
T 3qup_A 169 MLAEDMTVCVADFGLSRKIYSGDY--YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA 246 (323)
T ss_dssp EECTTSCEEECCCCC-------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG
T ss_pred EEcCCCCEEEeecccccccccccc--ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH
Confidence 999999999999999875433211 111223445778999999977788999999999999999999 8999965432
Q ss_pred -----------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -----------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -----------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|+.+.+++.+||..||.+||++.++++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l 293 (323)
T 3qup_A 247 EIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMEL 293 (323)
T ss_dssp GHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 234567899999999999999999999988877764
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=324.63 Aligned_cols=246 Identities=14% Similarity=0.171 Sum_probs=188.3
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC--CchHHHHHHHHHHHhCC-CCCcceEeeeEEc
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA--DTYEPALSYVKKLKTLR-HPSILTFLDSVES 128 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~ 128 (852)
...+|++.+.|| .|+++.||+|+++.+|+.|+||++... .....+.+|+.++++++ ||||+++++++..
T Consensus 26 ~~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~ 97 (337)
T 3ll6_A 26 GELRLRVRRVLA--------EGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASI 97 (337)
T ss_dssp TTEEEEEEEEEE--------CCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred cCceEEEEEEEc--------cCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccc
Confidence 345799999999 999999999999999999999988652 23456789999999996 9999999999842
Q ss_pred ------CCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC--ceecccCCCCEEEccCC
Q psy3914 129 ------PSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDAD--LRHNHVNHTSIFINSCG 199 (852)
Q Consensus 129 ------~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~--ivH~DIkp~NIlV~~~g 199 (852)
.....+|+||||+. +|.+++.. ....+.+++..+..++.||+.||.||| ..+ ++||||||+||+++.+|
T Consensus 98 ~~~~~~~~~~~~~lv~e~~~g~L~~~l~~-~~~~~~~~~~~~~~i~~qi~~~l~~LH-~~~~~ivH~Dikp~NIl~~~~~ 175 (337)
T 3ll6_A 98 GKEESDTGQAEFLLLTELCKGQLVEFLKK-MESRGPLSCDTVLKIFYQTCRAVQHMH-RQKPPIIHRDLKVENLLLSNQG 175 (337)
T ss_dssp CTTTSTTSSEEEEEEEECCSEEHHHHHHH-HHTTCSCCHHHHHHHHHHHHHHHHHHH-TSSSCCBCCCCCGGGCEECTTS
T ss_pred cccccccCCceEEEEEEecCCCHHHHHHH-hhccCCCCHHHHHHHHHHHHHHHHHHH-hCCCCEEEccCCcccEEECCCC
Confidence 12256999999999 89998843 334567999999999999999999999 888 99999999999999999
Q ss_pred cEEEcccchhhccccccCCCC--------cccccccCCCcccCCccc---cCCCCCcchhHHhHHHHHHHHHhCCCCCCC
Q psy3914 200 EWKLGGLEYMEKISEASCIPM--------KRYSRYEDQSTYQIPENS---LSHVTKCSTDMYGLGILIWEVFNGPLQSTN 268 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~--------~~~~~~~gt~~Y~APE~~---~~~~~~~~sDIwSLG~ll~el~tG~~pf~~ 268 (852)
.+||+|||++........... .......+|+.|+|||++ .+..++.++|||||||++|+|++|..||.+
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 255 (337)
T 3ll6_A 176 TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255 (337)
T ss_dssp CEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred CEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 999999999875543211110 111134588899999998 566788899999999999999999999964
Q ss_pred Cccc---------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 269 RKSL---------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 269 ~~~l---------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.... .....++..+.+++++||..||.+||++.++++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l 303 (337)
T 3ll6_A 256 GAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQL 303 (337)
T ss_dssp ----------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred hhHHHhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 3322 22356678899999999999999999999999874
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-36 Score=331.13 Aligned_cols=246 Identities=19% Similarity=0.251 Sum_probs=193.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC--
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS-- 130 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~-- 130 (852)
.+|++.+.|| .|++|+||+|+++.+|+.|+||++.. ........++++.++.++||||+++++++....
T Consensus 23 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 23 DRFQVERMAG--------QGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp TTEEEC------------------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred cceEEEEEEe--------cCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 3599999999 99999999999999999999999876 333456778888899999999999999986531
Q ss_pred ---CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceecccCCCCEEEcc-CCcEEEc
Q psy3914 131 ---KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLIN-DADLRHNHVNHTSIFINS-CGEWKLG 204 (852)
Q Consensus 131 ---~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~-~~~ivH~DIkp~NIlV~~-~g~~KL~ 204 (852)
..++|+||||+. +|...+.........+++..+..++.||+.||.|||. +.+++||||||+||+++. +|.+||+
T Consensus 95 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~ 174 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLC 174 (360)
T ss_dssp CTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEEC
T ss_pred cccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEe
Confidence 124899999999 6777776555666789999999999999999999994 578999999999999997 8999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC---------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN--------- 274 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~--------- 274 (852)
|||++....... ......||+.|+|||++. ...++.++|||||||++|+|++|..||.+......
T Consensus 175 Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 249 (360)
T 3e3p_A 175 DFGSAKKLSPSE-----PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG 249 (360)
T ss_dssp CCTTCBCCCTTS-----CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred eCCCceecCCCC-----CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcC
Confidence 999987543211 122456788999999984 44589999999999999999999999965432100
Q ss_pred ----------------------------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 275 ----------------------------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 275 ----------------------------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
...+++.+.+++.+||..||.+|||+.++++| +||++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h-----p~f~~~ 321 (360)
T 3e3p_A 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH-----PYFDEL 321 (360)
T ss_dssp CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS-----GGGGGG
T ss_pred CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC-----cccccc
Confidence 11256789999999999999999999999997 888653
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-36 Score=335.40 Aligned_cols=242 Identities=13% Similarity=0.166 Sum_probs=200.0
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-CchHHHHHHHHHHHhCC--------CCCcceE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-DTYEPALSYVKKLKTLR--------HPSILTF 122 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-~~~~~~~~E~~~Lk~Lr--------HPnIlk~ 122 (852)
...+|++.+.|| .|++|+||+|++..+++.||||++... ...+.+.+|+++|+.++ ||||+++
T Consensus 35 ~~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~ 106 (397)
T 1wak_A 35 FNGRYHVIRKLG--------WGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQL 106 (397)
T ss_dssp ETTTEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCE
T ss_pred cCCeEEEEEEee--------ecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeee
Confidence 345799999999 999999999999999999999999862 33567889999999996 7889999
Q ss_pred eeeEEcC--CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC-CceecccCCCCEEEccC
Q psy3914 123 LDSVESP--SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDA-DLRHNHVNHTSIFINSC 198 (852)
Q Consensus 123 ~d~~e~~--~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~-~ivH~DIkp~NIlV~~~ 198 (852)
++++... ....+||||||+. +|.+.+... ....+++..+..++.||+.||.||| +. ||+||||||+|||++.+
T Consensus 107 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH-~~~givHrDikp~NIll~~~ 183 (397)
T 1wak_A 107 LDDFKISGVNGTHICMVFEVLGHHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLH-TKCRIIHTDIKPENILLSVN 183 (397)
T ss_dssp EEEEEEEETTEEEEEEEECCCCCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHH-HTTCEECCCCSGGGEEECCC
T ss_pred ecceeecCCCCceEEEEEeccCccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHH-HhCCEecCCCCHHHeeEecc
Confidence 9998721 1268999999999 677766432 2256899999999999999999999 65 99999999999999977
Q ss_pred C-------------------------------------------------cEEEcccchhhccccccCCCCcccccccCC
Q psy3914 199 G-------------------------------------------------EWKLGGLEYMEKISEASCIPMKRYSRYEDQ 229 (852)
Q Consensus 199 g-------------------------------------------------~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt 229 (852)
| .+||+|||++...... .....||
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-------~~~~~gt 256 (397)
T 1wak_A 184 EQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-------FTEDIQT 256 (397)
T ss_dssp HHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-------SCSCCSC
T ss_pred chhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-------CccCCCC
Confidence 6 7999999998754321 2235688
Q ss_pred CcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC-----------------------------------
Q psy3914 230 STYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN----------------------------------- 274 (852)
Q Consensus 230 ~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~----------------------------------- 274 (852)
+.|+|||++.+..++.++|||||||++|+|++|..||.+......
T Consensus 257 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 336 (397)
T 1wak_A 257 RQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKK 336 (397)
T ss_dssp GGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTT
T ss_pred CcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCc
Confidence 999999999877899999999999999999999999964321110
Q ss_pred ------------------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 275 ------------------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 275 ------------------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
...+++.+.+++.+||..||.+|||+.++++| +||++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h-----p~~~~ 397 (397)
T 1wak_A 337 GDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH-----PWLNS 397 (397)
T ss_dssp SSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS-----GGGGC
T ss_pred cccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC-----ccccC
Confidence 01123467899999999999999999999998 88863
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=319.25 Aligned_cols=242 Identities=13% Similarity=0.143 Sum_probs=200.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEE----EcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGK----KKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~----~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
...|++.+.|| .|++|.||.|+ +..+++.|+||++.. ......+.+|+++++.++||||++++++
T Consensus 20 ~~~~~~~~~lg--------~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 91 (302)
T 4e5w_A 20 KRFLKRIRDLG--------EGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGI 91 (302)
T ss_dssp GGGEEEEEEEE--------ECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred hhhhhhhhccC--------CCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeE
Confidence 34599999999 99999999999 567899999999986 3456789999999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+.+.....+|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||
T Consensus 92 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dikp~Nil~~~~~~~kl 167 (302)
T 4e5w_A 92 CTEDGGNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLG-SRQYVHRDLAARNVLVESEHQVKI 167 (302)
T ss_dssp EEC---CCEEEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEEETTEEEE
T ss_pred EecCCCceEEEEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHhh-cCCcccCCCchheEEEcCCCCEEE
Confidence 98764467999999997 799998432 356899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCC--------------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNR-------------- 269 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~-------------- 269 (852)
+|||++........ .........+|..|+|||++.+..++.++|||||||++|+|++|..|+...
T Consensus 168 ~Dfg~~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 246 (302)
T 4e5w_A 168 GDFGLTKAIETDKE-YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQ 246 (302)
T ss_dssp CCCTTCEECCTTCC-EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGG
T ss_pred CcccccccccCCCc-ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccc
Confidence 99999875543211 112223456778899999997777888999999999999999998875211
Q ss_pred -------------ccccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 270 -------------KSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 270 -------------~~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
........+|+.+.+++.+||..||.+|||+.++++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L 297 (302)
T 4e5w_A 247 MTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGF 297 (302)
T ss_dssp GHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred cCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 11123457889999999999999999999999999864
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-36 Score=326.93 Aligned_cols=240 Identities=17% Similarity=0.189 Sum_probs=201.3
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEE-cCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCC------cceEe
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKK-KGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPS------ILTFL 123 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~-k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPn------Ilk~~ 123 (852)
...+|++.+.|| .|++|+||+|.+ +.+++.|+||++.. ....+.+.+|+++++.++|++ |++++
T Consensus 12 ~~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~ 83 (339)
T 1z57_A 12 LSARYEIVDTLG--------EGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQML 83 (339)
T ss_dssp ETTTEEEEEEEE--------EETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEE
T ss_pred ccCceEEEEEEe--------cCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeee
Confidence 445799999999 999999999998 56899999999986 233567889999999887654 99999
Q ss_pred eeEEcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc-----
Q psy3914 124 DSVESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS----- 197 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~----- 197 (852)
+++++. +.+|+||||+. +|.+++... ....+++..+..++.||+.||.||| +.+++||||||+||+++.
T Consensus 84 ~~~~~~--~~~~lv~e~~~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~Dlkp~Nil~~~~~~~~ 158 (339)
T 1z57_A 84 EWFEHH--GHICIVFELLGLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLH-SNKLTHTDLKPENILFVQSDYTE 158 (339)
T ss_dssp EEEEET--TEEEEEEECCCCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEESCCCEEE
T ss_pred cccccC--CcEEEEEcCCCCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHH-HCCCcCCCCCHHHEEEecccccc
Confidence 999988 89999999998 799888532 2246889999999999999999999 899999999999999987
Q ss_pred --------------CCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCC
Q psy3914 198 --------------CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGP 263 (852)
Q Consensus 198 --------------~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~ 263 (852)
++.+||+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 231 (339)
T 1z57_A 159 AYNPKIKRDERTLINPDIKVVDFGSATYDDE-------HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGF 231 (339)
T ss_dssp EEC----CEEEEESCCCEEECCCSSCEETTS-------CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred ccCCccccccccccCCCceEeeCcccccCcc-------ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCC
Confidence 66899999999874322 122456888999999998888999999999999999999999
Q ss_pred CCCCCCccccC-------------------------------------------------------cCCCChhHHHHHHH
Q psy3914 264 LQSTNRKSLSN-------------------------------------------------------IDNIPENLKRVYLE 288 (852)
Q Consensus 264 ~pf~~~~~l~~-------------------------------------------------------~~~ip~~L~~li~~ 288 (852)
.||.+...... ....++.+.+++.+
T Consensus 232 ~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 311 (339)
T 1z57_A 232 TVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQK 311 (339)
T ss_dssp CSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHH
Confidence 99965322110 01124568899999
Q ss_pred hccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 289 LISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 289 lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
||..||.+|||+.++++| +||+.
T Consensus 312 ~L~~dP~~Rpt~~ell~h-----p~f~~ 334 (339)
T 1z57_A 312 MLEYDPAKRITLREALKH-----PFFDL 334 (339)
T ss_dssp HTCSSTTTSCCHHHHTTS-----GGGGG
T ss_pred HhCcCcccccCHHHHhcC-----HHHHH
Confidence 999999999999999997 88864
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=353.68 Aligned_cols=245 Identities=16% Similarity=0.228 Sum_probs=213.0
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhC-CCCCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTL-RHPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~ 125 (852)
...+|++.+.|| .|+||.||+|+++.+++.||||++.+ ....+.+.+|..+|..+ +||+|++++++
T Consensus 339 ~~~~f~~~~~LG--------~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~ 410 (674)
T 3pfq_A 339 KLTDFNFLMVLG--------KGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC 410 (674)
T ss_dssp -CTTEEEEEESS--------BTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEE
T ss_pred cccceEEEEEEc--------cCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE
Confidence 445699999999 99999999999999999999999986 45567788999999988 69999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+++. ..+||||||+. +|..+|.+. +.+++..++.++.||+.||.||| +.+|+||||||+|||++.+|.+||
T Consensus 411 ~~~~--~~~~lV~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH-~~gIiHrDLKp~NILl~~~g~ikL 483 (674)
T 3pfq_A 411 FQTM--DRLYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQ-SKGIIYRDLKLDNVMLDSEGHIKI 483 (674)
T ss_dssp CBCS--SEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH-HTSEECCCCCSTTEEECSSSCEEE
T ss_pred EEeC--CEEEEEEeCcCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH-hCCeEeccCChhhEEEcCCCcEEE
Confidence 9987 89999999998 799888532 57999999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------c
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------L 272 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l 272 (852)
+|||++...... ........||+.|+|||++.+..++.++|+|||||++|||++|..||.+... .
T Consensus 484 ~DFGla~~~~~~----~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~ 559 (674)
T 3pfq_A 484 ADFGMCKENIWD----GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV 559 (674)
T ss_dssp CCCTTCEECCCT----TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCC
T ss_pred eecceeeccccC----CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Confidence 999998743211 1223356799999999999888899999999999999999999999976432 2
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCH-----HHHHHhhcCCCCCCcchHHH
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNP-----ADFIMRNRKPGGYFKNDLID 320 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~-----~elL~~l~~~~~fF~n~lv~ 320 (852)
..+..+++.+.++|++||..||.+||++ .++++| +||++.-.+
T Consensus 560 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h-----~ff~~i~w~ 607 (674)
T 3pfq_A 560 AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH-----AFFRYIDWE 607 (674)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS-----GGGSSCCHH
T ss_pred CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC-----ccccCCCHH
Confidence 3356789999999999999999999998 889887 899875443
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=325.86 Aligned_cols=243 Identities=16% Similarity=0.202 Sum_probs=201.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEc-----CCCeEEEEEEEeC---CCchHHHHHHHHHHHhC-CCCCcceEe
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK-----GSNEKVTIFLNDS---ADTYEPALSYVKKLKTL-RHPSILTFL 123 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k-----~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~L-rHPnIlk~~ 123 (852)
...|++++.|| .|++|.||.|++. .++..|+||++.. ......+.+|+.+|+++ +||||++++
T Consensus 44 ~~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 115 (344)
T 1rjb_A 44 RENLEFGKVLG--------SGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLL 115 (344)
T ss_dssp GGGEEEEEEEE--------ECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred HHHceeeeeec--------CCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence 34699999999 9999999999973 4567899999976 33456789999999999 899999999
Q ss_pred eeEEcCCCCeEEEEEeecc--cHHHHHHhhhhc-------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q psy3914 124 DSVESPSKSLVYLAVEYVE--PIFYHLDNTLKE-------------------NNEKKQIYISWGIFQITRALSFLINDAD 182 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~-------------------~~~l~e~~i~~~l~QI~~aL~fLH~~~~ 182 (852)
+++... +.+|+||||+. +|.+++...... ...+++..+..++.||+.||.||| +.|
T Consensus 116 ~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ 192 (344)
T 1rjb_A 116 GACTLS--GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE-FKS 192 (344)
T ss_dssp EEECSS--SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred EEEeeC--CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH-hCC
Confidence 999987 88999999997 899999543210 134789999999999999999999 899
Q ss_pred ceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-
Q psy3914 183 LRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN- 261 (852)
Q Consensus 183 ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t- 261 (852)
++||||||+||+++.+|.+||+|||++........ ........+|+.|+|||++.+..++.++|||||||++|+|++
T Consensus 193 ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~ 270 (344)
T 1rjb_A 193 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN--YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSL 270 (344)
T ss_dssp EEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT--SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred cccCCCChhhEEEcCCCcEEeCCCccCcccccCcc--ceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcC
Confidence 99999999999999999999999999975543211 122233456778999999977788999999999999999998
Q ss_pred CCCCCCCCcc-------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 262 GPLQSTNRKS-------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 262 G~~pf~~~~~-------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
|..||.+... ......+|+.+.+++.+||..||.+||++.++++++.
T Consensus 271 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 271 GVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp SCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 9999965422 1234567999999999999999999999999999853
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-35 Score=312.92 Aligned_cols=242 Identities=12% Similarity=0.087 Sum_probs=203.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
..+|++++.|| .|++|.||+|+++.+|+.|+||++........+.+|+.+++.++|++++..+..+... ..
T Consensus 8 ~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-~~ 78 (296)
T 3uzp_A 8 GNRYRLGRKIG--------SGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAE-GD 78 (296)
T ss_dssp TTTEEEEEEEE--------EETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEE-TT
T ss_pred ccEEEEEEEEc--------cCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCC-CC
Confidence 35699999999 9999999999999999999999998755556789999999999998877776665432 27
Q ss_pred eEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEc---cCCcEEEcccch
Q psy3914 133 LVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN---SCGEWKLGGLEY 208 (852)
Q Consensus 133 ~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~---~~g~~KL~DFg~ 208 (852)
..|+||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++ .++.+||+|||+
T Consensus 79 ~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 154 (296)
T 3uzp_A 79 YNVMVMELLGPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIH-SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEEEEEECCCCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred ceEEEEEecCCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHH-hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCC
Confidence 8999999998 79999842 2357999999999999999999999 89999999999999994 789999999999
Q ss_pred hhccccccC---CCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc------------
Q psy3914 209 MEKISEASC---IPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------ 273 (852)
Q Consensus 209 a~~~~~~~~---~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------ 273 (852)
+........ .+........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 234 (296)
T 3uzp_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK 234 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccc
Confidence 886543221 11122345678999999999988889999999999999999999999996532211
Q ss_pred --C-----cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 274 --N-----IDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 274 --~-----~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
. ...+|+.+.+++.+||+.||.+||++.++++.+
T Consensus 235 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l 275 (296)
T 3uzp_A 235 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF 275 (296)
T ss_dssp HHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHH
T ss_pred cCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHH
Confidence 1 257899999999999999999999999998864
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-35 Score=313.91 Aligned_cols=241 Identities=12% Similarity=0.092 Sum_probs=200.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeE-EcCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSV-ESPSK 131 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~-e~~~~ 131 (852)
..+|++++.|| .|++++||.|+++.+++.|+||++........+.+|+++++.++|++++..+..+ ...
T Consensus 8 ~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~-- 77 (296)
T 4hgt_A 8 GNRYRLGRKIG--------SGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEG-- 77 (296)
T ss_dssp ---CEEEEEEE--------ECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEET--
T ss_pred CCceEEeeeec--------CCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCC--
Confidence 45699999999 9999999999999999999999987744455688999999999998887777666 444
Q ss_pred CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE---ccCCcEEEcccc
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI---NSCGEWKLGGLE 207 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV---~~~g~~KL~DFg 207 (852)
...|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++||||||+||++ +.++.+||+|||
T Consensus 78 ~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH-~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg 153 (296)
T 4hgt_A 78 DYNVMVMELLGPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIH-SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153 (296)
T ss_dssp TEEEEEEECCCCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECCGGGTTCEEECCCT
T ss_pred CceEEEEEccCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHeeeeccCCCCeEEEecCc
Confidence 78999999998 799988432 356899999999999999999999 8999999999999999 789999999999
Q ss_pred hhhccccccC---CCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC----------
Q psy3914 208 YMEKISEASC---IPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN---------- 274 (852)
Q Consensus 208 ~a~~~~~~~~---~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~---------- 274 (852)
++........ .+........||+.|+|||++.+..++.++|||||||++|+|++|..||.+......
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 233 (296)
T 4hgt_A 154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK 233 (296)
T ss_dssp TCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH
T ss_pred cceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcc
Confidence 9986543221 122233456789999999999888899999999999999999999999965322210
Q ss_pred ---------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 275 ---------IDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 275 ---------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
...+|+.+.+++.+||+.+|.+||++.++++.+
T Consensus 234 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l 275 (296)
T 4hgt_A 234 KMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF 275 (296)
T ss_dssp HHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHH
T ss_pred cccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHH
Confidence 157799999999999999999999999998864
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-35 Score=312.08 Aligned_cols=235 Identities=16% Similarity=0.224 Sum_probs=199.4
Q ss_pred CCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---------CchHHHHHHHHHHHhCCCCCcce
Q psy3914 51 SKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---------DTYEPALSYVKKLKTLRHPSILT 121 (852)
Q Consensus 51 ~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---------~~~~~~~~E~~~Lk~LrHPnIlk 121 (852)
....+|++.+.|| .|++++||+|+++.+++.|+||++... ...+.+.+|+++++.++||||++
T Consensus 16 ~~~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 87 (287)
T 4f0f_A 16 LADNEIEYEKQIG--------KGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87 (287)
T ss_dssp CCSTTEEEEEECC--------CCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCC
T ss_pred hhhccceehhccc--------cCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchh
Confidence 3456799999999 999999999999999999999998761 11267899999999999999999
Q ss_pred EeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC--ceecccCCCCEEEcc
Q psy3914 122 FLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDAD--LRHNHVNHTSIFINS 197 (852)
Q Consensus 122 ~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~--ivH~DIkp~NIlV~~ 197 (852)
+++++.+. . |+||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+ ++||||||+||+++.
T Consensus 88 ~~~~~~~~--~--~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH-~~~~~ivH~dikp~Nil~~~ 159 (287)
T 4f0f_A 88 LYGLMHNP--P--RMVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQS 159 (287)
T ss_dssp EEEEETTT--T--EEEEECCTTCBHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHH-TSSSCCBCSCCSGGGEEESC
T ss_pred hheeecCC--C--eEEEEecCCCCHHHHHhc---ccCCccHHHHHHHHHHHHHHHHHHH-hCCCCeecCCCCcceEEEec
Confidence 99999765 3 79999997 78887743 3357899999999999999999999 889 999999999999998
Q ss_pred CCc-----EEEcccchhhccccccCCCCcccccccCCCcccCCccc--cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc
Q psy3914 198 CGE-----WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENS--LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK 270 (852)
Q Consensus 198 ~g~-----~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~--~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~ 270 (852)
++. +||+|||++..... ......||+.|+|||++ ....++.++|||||||++|+|++|..||.+..
T Consensus 160 ~~~~~~~~~kl~Dfg~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 232 (287)
T 4f0f_A 160 LDENAPVCAKVADFGLSQQSVH-------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232 (287)
T ss_dssp CCTTCSCCEEECCCTTCBCCSS-------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred cCCCCceeEEeCCCCccccccc-------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence 887 99999999863321 12345688999999998 45567889999999999999999999996432
Q ss_pred c---------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 271 S---------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 271 ~---------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
. ......+|+.+.+++.+||..||.+||++.++++.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 285 (287)
T 4f0f_A 233 YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285 (287)
T ss_dssp CCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 1 1234678899999999999999999999999998753
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=328.62 Aligned_cols=235 Identities=16% Similarity=0.223 Sum_probs=197.2
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC----chHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD----TYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~----~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|.+.+.|| .|++|.||.|+++.+|+.|+||++.... ....+.+|+.+++.++||||+++++++....
T Consensus 25 ~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 96 (353)
T 3coi_A 25 TYVSPTHVG--------SGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPAS 96 (353)
T ss_dssp TEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS
T ss_pred eEEEeeeEe--------cCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccc
Confidence 599999999 9999999999999999999999997622 2456789999999999999999999998751
Q ss_pred C----CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 131 K----SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 131 ~----~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
. ..+|+||||+. +|..++. ..+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+|
T Consensus 97 ~~~~~~~~~lv~e~~~~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH-~~~ivH~dlkp~NIl~~~~~~~kl~D 169 (353)
T 3coi_A 97 SLRNFYDFYLVMPFMQTDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIH-SAGVVHRDLKPGNLAVNEDCELKILD 169 (353)
T ss_dssp SGGGCCCCEEEEECCSEEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSSCCGGGEEECTTCCEEECS
T ss_pred ccccceeEEEEeccccCCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEeECCCCcEEEee
Confidence 1 13599999999 6766552 35899999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------ 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------ 272 (852)
||++...... .....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+....
T Consensus 170 fg~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~ 242 (353)
T 3coi_A 170 FGLARHADAE-------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV 242 (353)
T ss_dssp TTCTTC---------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCB
T ss_pred cccccCCCCC-------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 9998754321 123467889999999854 67889999999999999999999999653211
Q ss_pred ------------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 ------------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 ------------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....+++.+.+++.+||..||.+||++.++++| +||+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h-----p~f~~ 311 (353)
T 3coi_A 243 PGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH-----PFFEP 311 (353)
T ss_dssp CCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS-----GGGTT
T ss_pred CCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC-----cchhh
Confidence 1124678899999999999999999999999997 88864
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=333.25 Aligned_cols=240 Identities=13% Similarity=0.118 Sum_probs=196.9
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCC--CCCcceEeeeE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLR--HPSILTFLDSV 126 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~Lr--HPnIlk~~d~~ 126 (852)
...|++++.|| .|+||+||+|.+.. ++.|+||++... .....+.+|+.+|+.|+ ||||+++++++
T Consensus 55 ~~~y~~~~~LG--------~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~ 125 (390)
T 2zmd_A 55 GRIYSILKQIG--------SGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 125 (390)
T ss_dssp TEEEEEEEEEE--------CCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred CCceEEEEEEc--------cCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEE
Confidence 34599999999 99999999999875 899999999862 23467889999999997 59999999999
Q ss_pred EcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 127 ESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
..+ ..+|||||+.. +|.+++.. ...+++..+..++.||+.||.||| +.+|+||||||+|||++ +|.+||+|
T Consensus 126 ~~~--~~~~lv~E~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH-~~~ivHrDlkp~NIll~-~~~~kl~D 197 (390)
T 2zmd_A 126 ITD--QYIYMVMECGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIH-QHGIVHSDLKPANFLIV-DGMLKLID 197 (390)
T ss_dssp ECS--SEEEEEEECCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHH-TTTCCCCCCCGGGEEES-SSCEEECC
T ss_pred ecC--CEEEEEEecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecCCCHHHEEEE-CCeEEEEe
Confidence 987 89999999766 79998843 257889999999999999999999 89999999999999995 68999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccC-----------CCCCcchhHHhHHHHHHHHHhCCCCCCCCcc---
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-----------HVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--- 271 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-----------~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--- 271 (852)
||++..+..... ........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+...
T Consensus 198 FG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 275 (390)
T 2zmd_A 198 FGIANQMQPDTT--SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS 275 (390)
T ss_dssp CSSSCCC-----------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH
T ss_pred cCccccccCCCc--cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH
Confidence 999875532211 111234578999999999843 4688899999999999999999999964311
Q ss_pred -----------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 272 -----------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 272 -----------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.......+..+.+++.+||..||.+||++.++++| +||..
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h-----p~~~~ 326 (390)
T 2zmd_A 276 KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH-----PYVQI 326 (390)
T ss_dssp HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS-----HHHHS
T ss_pred HHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC-----cCccc
Confidence 11234457889999999999999999999999997 67753
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-35 Score=311.89 Aligned_cols=231 Identities=16% Similarity=0.236 Sum_probs=190.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC------CCchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS------ADTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~------~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
.+|++.+.|| .|++++||+|.+ +|..|+||++.. ....+.+.+|+++++.++||||+++++++.
T Consensus 7 ~~~~~~~~lg--------~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 76 (271)
T 3dtc_A 7 AELTLEEIIG--------IGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCL 76 (271)
T ss_dssp TSEEEEEEEE--------EETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hheeeeeeec--------cCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 4699999999 999999999998 488999999876 234567899999999999999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC---ceecccCCCCEEEcc-----
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDAD---LRHNHVNHTSIFINS----- 197 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~---ivH~DIkp~NIlV~~----- 197 (852)
+. +.+|+||||+. +|.+++. ...+++..+..++.||+.||.||| +.+ ++||||||+||+++.
T Consensus 77 ~~--~~~~lv~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH-~~~~~~i~H~dikp~Nil~~~~~~~~ 148 (271)
T 3dtc_A 77 KE--PNLCLVMEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLH-DEAIVPIIHRDLKSSNILILQKVENG 148 (271)
T ss_dssp CC----CEEEEECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHH-HSSSSCCCCSCCSGGGEEESSCCSSS
T ss_pred cC--CceEEEEEcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHH-hCCCCceeecCCchHHEEEecccccc
Confidence 87 88999999997 7888873 357899999999999999999999 777 899999999999986
Q ss_pred ---CCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc---
Q psy3914 198 ---CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--- 271 (852)
Q Consensus 198 ---~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--- 271 (852)
++.+||+|||++....... .....|++.|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus 149 ~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~ 222 (271)
T 3dtc_A 149 DLSNKILKITDFGLAREWHRTT------KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV 222 (271)
T ss_dssp CCSSCCEEECCCCC-------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH
T ss_pred cccCcceEEccCCccccccccc------ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 6789999999987543221 1134678899999999777889999999999999999999999965422
Q ss_pred ----------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 272 ----------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 272 ----------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
......+|+.+.+++.+||+.||.+||++.++++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~ 269 (271)
T 3dtc_A 223 AYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLT 269 (271)
T ss_dssp HHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHh
Confidence 2234678999999999999999999999999999864
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=320.20 Aligned_cols=242 Identities=15% Similarity=0.206 Sum_probs=203.1
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEE-----cCCCeEEEEEEEeCCC---chHHHHHHHHHHHhC-CCCCcceEe
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKK-----KGSNEKVTIFLNDSAD---TYEPALSYVKKLKTL-RHPSILTFL 123 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~-----k~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~L-rHPnIlk~~ 123 (852)
..+|++++.|| .|++|.||+|+. ..++..|+||++.... ..+.+.+|+++++.+ +||||++++
T Consensus 22 ~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~ 93 (313)
T 1t46_A 22 RNRLSFGKTLG--------AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLL 93 (313)
T ss_dssp GGGEEEEEEEE--------ECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hhhhhHHHhhC--------ccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEE
Confidence 34699999999 999999999985 4567899999998732 346788999999999 899999999
Q ss_pred eeEEcCCCCeEEEEEeecc--cHHHHHHhhhh--------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecc
Q psy3914 124 DSVESPSKSLVYLAVEYVE--PIFYHLDNTLK--------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNH 187 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~--------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~D 187 (852)
+++.+. +..|+||||+. +|.+++..... ....+++..+..++.||+.||.||| +.+++|||
T Consensus 94 ~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~d 170 (313)
T 1t46_A 94 GACTIG--GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA-SKNCIHRD 170 (313)
T ss_dssp EEECSS--SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSC
T ss_pred EEEecC--CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH-HCCeecCC
Confidence 999987 88999999997 79999854321 1235899999999999999999999 89999999
Q ss_pred cCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCC
Q psy3914 188 VNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQS 266 (852)
Q Consensus 188 Ikp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf 266 (852)
|||+||+++.+|.+||+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|++ |..||
T Consensus 171 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~ 248 (313)
T 1t46_A 171 LAARNILLTHGRITKICDFGLARDIKNDSN--YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 248 (313)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCTTSCTT--SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred CccceEEEcCCCCEEEcccccccccccccc--ceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999875543211 112223456778999999977788999999999999999998 99999
Q ss_pred CCCccc-------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 267 TNRKSL-------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 267 ~~~~~l-------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.+.... .....+|..+.+++.+||..||.+||++.++++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 302 (313)
T 1t46_A 249 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302 (313)
T ss_dssp TTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 654221 12457899999999999999999999999999875
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=316.64 Aligned_cols=238 Identities=17% Similarity=0.246 Sum_probs=190.3
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCC---CeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS---NEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~---g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
...+|++++.|| .|++|.||+|++..+ +..|+||++... ...+.+.+|+..++.++||||++++++
T Consensus 13 ~~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 84 (281)
T 1mp8_A 13 QRERIELGRCIG--------EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 84 (281)
T ss_dssp CGGGEEEEEEEE--------ECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ehHHeEEEeEee--------ecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEE
Confidence 345799999999 999999999998764 457999998762 234568899999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+.+ +..|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||
T Consensus 85 ~~~---~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~kl 157 (281)
T 1mp8_A 85 ITE---NPVWIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLE-SKRFVHRDIAARNVLVSSNDCVKL 157 (281)
T ss_dssp ECS---SSCEEEEECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEEEETTEEEE
T ss_pred Ecc---CccEEEEecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH-hCCeecccccHHHEEECCCCCEEE
Confidence 853 56899999998 799988532 346899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-----------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS----------- 271 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~----------- 271 (852)
+|||++........ .......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 158 ~Dfg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~ 234 (281)
T 1mp8_A 158 GDFGLSRYMEDSTY---YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 234 (281)
T ss_dssp CC----------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC
T ss_pred CccccccccCcccc---cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCC
Confidence 99999875533211 11123345678999999977788999999999999999996 8999965322
Q ss_pred -ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|+.+.+++.+||..||.+||++.++++++
T Consensus 235 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l 271 (281)
T 1mp8_A 235 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 271 (281)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 223467899999999999999999999999999874
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=323.93 Aligned_cols=239 Identities=14% Similarity=0.186 Sum_probs=198.0
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeE----EEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEK----VTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLD 124 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~----VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d 124 (852)
...+|++.+.|| .|++|+||+|+++.+++. |++|++.. ......+.+|+.+++.++||||+++++
T Consensus 11 ~~~~y~~~~~lG--------~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 82 (325)
T 3kex_A 11 KETELRKLKVLG--------SGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG 82 (325)
T ss_dssp CTTTEEEEEEEE--------CCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEE
T ss_pred CHhHceeeeeee--------ecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEE
Confidence 345799999999 999999999999888875 77777754 233456778999999999999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
+++. ...|+||||+. +|.+++... .+.+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+|
T Consensus 83 ~~~~---~~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~Dikp~Nil~~~~~~~k 155 (325)
T 3kex_A 83 LCPG---SSLQLVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLE-EHGMVHRNLAARNVLLKSPSQVQ 155 (325)
T ss_dssp EECB---SSEEEEEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHH-HTTCCCSCCSSTTEEESSSSCEE
T ss_pred EEcC---CccEEEEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHH-hCCCCCCccchheEEECCCCeEE
Confidence 9864 56999999998 798888432 246888899999999999999999 89999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc----------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS---------- 271 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~---------- 271 (852)
|+|||+++....... ........++..|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 156 l~Dfg~a~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~ 233 (325)
T 3kex_A 156 VADFGVADLLPPDDK--QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKG 233 (325)
T ss_dssp ECSCSGGGGSCCCTT--CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTT
T ss_pred ECCCCcccccCcccc--cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcC
Confidence 999999986543221 112234567779999999977789999999999999999999 9999965421
Q ss_pred --ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 --LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 --l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......++..+.+++.+||..||.+||++.++++++
T Consensus 234 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l 271 (325)
T 3kex_A 234 ERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEF 271 (325)
T ss_dssp CBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHH
T ss_pred CCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 223456788999999999999999999999999975
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=321.85 Aligned_cols=247 Identities=15% Similarity=0.166 Sum_probs=201.7
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC-
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESP- 129 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~- 129 (852)
..+|++.+.|| .|+++.||+|+++.+|+.|+||++.. ....+.+.+|+.+++.++||||+++++++...
T Consensus 28 ~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 99 (317)
T 2buj_A 28 NKHYLFIQKLG--------EGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER 99 (317)
T ss_dssp TEEEEEEEEEE--------C--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE
T ss_pred CeEEEEEEEec--------CCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc
Confidence 35699999999 99999999999999999999999865 23456788999999999999999999998732
Q ss_pred -CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 130 -SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 130 -~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
....+|+||||+. +|.+++.........+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+||
T Consensus 100 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH-~~~ivH~dlkp~NIl~~~~~~~kl~df 178 (317)
T 2buj_A 100 GAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH-AKGYAHRDLKPTNILLGDEGQPVLMDL 178 (317)
T ss_dssp TTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTSCEEECCC
T ss_pred CCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCHHHEEEcCCCCEEEEec
Confidence 1257999999998 799999665555678999999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCC-----CcccccccCCCcccCCccccCCC---CCcchhHHhHHHHHHHHHhCCCCCCCC---------
Q psy3914 207 EYMEKISEASCIP-----MKRYSRYEDQSTYQIPENSLSHV---TKCSTDMYGLGILIWEVFNGPLQSTNR--------- 269 (852)
Q Consensus 207 g~a~~~~~~~~~~-----~~~~~~~~gt~~Y~APE~~~~~~---~~~~sDIwSLG~ll~el~tG~~pf~~~--------- 269 (852)
|++.......... ........||+.|+|||++.+.. ++.++|||||||++|+|++|..||...
T Consensus 179 g~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~ 258 (317)
T 2buj_A 179 GSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL 258 (317)
T ss_dssp SSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHH
T ss_pred CcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhH
Confidence 9876432211000 01112345688999999985433 678999999999999999999998421
Q ss_pred -----ccccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 270 -----KSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 270 -----~~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
........+|..+.+++.+||..||.+||++.++++++.
T Consensus 259 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 259 AVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp HHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 011223578899999999999999999999999999864
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-36 Score=325.65 Aligned_cols=242 Identities=14% Similarity=0.146 Sum_probs=199.9
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
...+|++.+.|| .|++|+||+|+.+ +|+.|+||++.. ....+.+.+|+++++.++||||+++++++.+.
T Consensus 37 ~~~~y~~~~~lg--------~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 37 ATNNFDHKFLIG--------HGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp CCCCCSCCCCSC--------BCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred HHhccCccceee--------cCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 345799999999 9999999999964 789999999876 34457789999999999999999999999887
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+.+|+||||+. +|.+++.........+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||
T Consensus 108 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 --NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH-TRAIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp --TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCSTTEEECTTCCEEECCCT
T ss_pred --CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc-CCCeecCCCCHHHEEECCCCCEEEeecc
Confidence 88999999997 788887433223346899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc--------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS-------------- 273 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~-------------- 273 (852)
++........ ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus 185 ~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 262 (321)
T 2qkw_B 185 ISKKGTELDQ--THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262 (321)
T ss_dssp TCEECSSSSC--CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT
T ss_pred cccccccccc--cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc
Confidence 9875332111 111223457889999999977778999999999999999999999985432110
Q ss_pred ----C------c----CCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 274 ----N------I----DNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 274 ----~------~----~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
. . ..++..+.+++.+||..||.+||++.++++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 310 (321)
T 2qkw_B 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310 (321)
T ss_dssp TCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 0 0 12345688999999999999999999999985
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=322.60 Aligned_cols=242 Identities=16% Similarity=0.218 Sum_probs=203.7
Q ss_pred CCCCeeEe-ccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCC-CCCcceEeee
Q psy3914 52 KDFAYEVG-EPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLR-HPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~-e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~ 125 (852)
+...|.+. +.|| .|++|+||+|.++.+|+.|+||++.. ......+.+|+.+++.++ ||||++++++
T Consensus 26 ~~~~y~~~~~~lG--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 26 FNNFYILTSKELG--------RGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp HHHHEEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hhhEEeeccceeC--------CCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 34458886 8899 99999999999999999999999987 234567899999999995 6999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc---CCc
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS---CGE 200 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~---~g~ 200 (852)
+++. ..+|+||||+. +|.+++.. .....+++..+..++.||+.||.||| +.|++||||||+||+++. +|.
T Consensus 98 ~~~~--~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~i~~ql~~~L~~LH-~~givH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 98 YENT--SEIILILEYAAGGEIFSLCLP--ELAEMVSENDVIRLIKQILEGVYYLH-QNNIVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp EECS--SEEEEEEECCTTEEGGGGGSS--CC-CCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEESCBTTBCC
T ss_pred EEeC--CeEEEEEEecCCCcHHHHHHH--hcccCCCHHHHHHHHHHHHHHHHHHH-HCCeecCcCChHHEEEecCCCCCc
Confidence 9987 89999999998 68777632 22357899999999999999999999 899999999999999998 789
Q ss_pred EEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc---------
Q psy3914 201 WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------- 271 (852)
Q Consensus 201 ~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------- 271 (852)
+||+|||++....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus 173 ~kL~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~ 247 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHAC-----ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ 247 (327)
T ss_dssp EEECCGGGCEEC--------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred EEEeeCccccccCCcc-----ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHh
Confidence 9999999987543221 12245688999999999888899999999999999999999999965422
Q ss_pred ------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 272 ------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 272 ------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
......+++.+.+++++||..||.+||++.++++| +||++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h-----~~~~~ 293 (327)
T 3lm5_A 248 VNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH-----SWLQQ 293 (327)
T ss_dssp TCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC-----GGGCC
T ss_pred cccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC-----Hhhcc
Confidence 12235788999999999999999999999999997 78865
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-35 Score=309.52 Aligned_cols=236 Identities=16% Similarity=0.198 Sum_probs=201.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
.+|++.+.|| .|+++.||.|++. ++..|+||++.. ....+.+.+|+++++.++||||+++++++.+. +
T Consensus 8 ~~y~~~~~lg--------~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~ 76 (267)
T 3t9t_A 8 SELTFVQEIG--------SGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ--A 76 (267)
T ss_dssp GGEEEEEEEE--------EETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSS--S
T ss_pred hheeeeeEec--------CCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccC--C
Confidence 4699999999 9999999999986 678999999987 33457889999999999999999999999987 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
.+|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||++.
T Consensus 77 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~ 152 (267)
T 3t9t_A 77 PICLVTEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLE-EACVIHRDLAARNCLVGENQVIKVSDFGMTR 152 (267)
T ss_dssp SCEEEECCCTTCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSSCCGGGEEECGGGCEEECCTTGGG
T ss_pred CeEEEEeCCCCCcHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCchheEEECCCCCEEEccccccc
Confidence 8999999997 799988532 356899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDN 277 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~ 277 (852)
....... .......++..|+|||++.+..++.++|+|||||++|+|++ |..||.+... ......
T Consensus 153 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~ 229 (267)
T 3t9t_A 153 FVLDDQY---TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRL 229 (267)
T ss_dssp GBCCHHH---HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTT
T ss_pred ccccccc---cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCcc
Confidence 5432111 11123446678999999977778899999999999999999 8999964321 122456
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
++..+.+++.+||+.||.+||++.++++++
T Consensus 230 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~L 259 (267)
T 3t9t_A 230 ASTHVYQIMNHCWRERPEDRPAFSRLLRQL 259 (267)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CcHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 789999999999999999999999999875
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-35 Score=317.35 Aligned_cols=239 Identities=13% Similarity=0.119 Sum_probs=195.0
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
.-.+|++.+.|| .|++|.||.|+++.+++.|+||++... .....+.+|+.+++.++||||+++++++
T Consensus 32 ~~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~ 103 (309)
T 2h34_A 32 QFGPYRLRRLVG--------RGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFG 103 (309)
T ss_dssp --CCEEEEEEEE--------ECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred EeccEEEEEEEc--------CCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEE
Confidence 345699999999 899999999999999999999999762 1236788999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
..+ +.+|+||||+. +|.+++... ..+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+
T Consensus 104 ~~~--~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dlkp~NIl~~~~~~~kl~ 176 (309)
T 2h34_A 104 EID--GQLYVDMRLINGVDLAAMLRRQ----GPLAPPRAVAIVRQIGSALDAAH-AAGATHRDVKPENILVSADDFAYLV 176 (309)
T ss_dssp EET--TEEEEEEECCCCEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTSCEEEC
T ss_pred eeC--CeEEEEEEecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH-HCcCCcCCCChHHEEEcCCCCEEEe
Confidence 987 89999999997 799988532 57899999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS------------- 271 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------------- 271 (852)
|||++....... ........+++.|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus 177 Dfg~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (309)
T 2h34_A 177 DFGIASATTDEK---LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPR 253 (309)
T ss_dssp SCCC-------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCC
T ss_pred cCccCccccccc---cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCC
Confidence 999987543221 1122245688899999999888889999999999999999999999965321
Q ss_pred -ccCcCCCChhHHHHHHHhccCCCCCCC-CHHHHHHhhc
Q psy3914 272 -LSNIDNIPENLKRVYLELISERPNQRP-NPADFIMRNR 308 (852)
Q Consensus 272 -l~~~~~ip~~L~~li~~lL~~nP~~Rp-s~~elL~~l~ 308 (852)
......+|+.+.+++.+||+.||.+|| ++.++++.+.
T Consensus 254 ~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 254 PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence 122457899999999999999999999 8999988654
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-35 Score=321.68 Aligned_cols=243 Identities=18% Similarity=0.247 Sum_probs=203.4
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCe-----EEEEEEEeCCC---chHHHHHHHHHHHhC-CCCCcceE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE-----KVTIFLNDSAD---TYEPALSYVKKLKTL-RHPSILTF 122 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~-----~VaVKv~~~~~---~~~~~~~E~~~Lk~L-rHPnIlk~ 122 (852)
....|++++.|| .|++|.||.|++..++. .|+||++.... ....+.+|+++++.+ +||||+++
T Consensus 44 ~~~~~~~~~~lG--------~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~ 115 (333)
T 2i1m_A 44 PRNNLQFGKTLG--------AGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 115 (333)
T ss_dssp CTTSEEEEEEEE--------ECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CHHHceeeeEec--------cCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeE
Confidence 345699999999 99999999999987664 79999998732 345788999999999 89999999
Q ss_pred eeeEEcCCCCeEEEEEeecc--cHHHHHHhhhh----------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCC
Q psy3914 123 LDSVESPSKSLVYLAVEYVE--PIFYHLDNTLK----------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNH 190 (852)
Q Consensus 123 ~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~----------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp 190 (852)
++++.+. +.+|+||||+. +|.+++..... ....+++..+..++.||+.||.||| +.+++||||||
T Consensus 116 ~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~Dlkp 192 (333)
T 2i1m_A 116 LGACTHG--GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA-SKNCIHRDVAA 192 (333)
T ss_dssp EEEECSS--SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSG
T ss_pred EEEEecC--CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh-cCCcccCCccc
Confidence 9999987 88999999997 79999864322 1346899999999999999999999 89999999999
Q ss_pred CCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCC
Q psy3914 191 TSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNR 269 (852)
Q Consensus 191 ~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~ 269 (852)
+||+++.+|.+||+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 193 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 270 (333)
T 2i1m_A 193 RNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270 (333)
T ss_dssp GGCEEEGGGEEEBCCCGGGCCGGGCTT--SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ceEEECCCCeEEECccccccccccccc--eeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCccc
Confidence 999999999999999999875533211 112223456778999999977788999999999999999998 88898653
Q ss_pred cc-------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 270 KS-------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 270 ~~-------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.. ......+|+.+.+++.+||+.||.+||++.++++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L 321 (333)
T 2i1m_A 271 LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 321 (333)
T ss_dssp CSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred chhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHH
Confidence 22 122456789999999999999999999999999874
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=321.61 Aligned_cols=239 Identities=13% Similarity=0.170 Sum_probs=194.2
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEE----EEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKV----TIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLD 124 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~V----aVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d 124 (852)
...+|++.+.|| .|++|+||+|++..+++.| ++|.+.. ......+.+|+.+++.++||||+++++
T Consensus 13 ~~~~y~~~~~lG--------~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 84 (327)
T 3poz_A 13 KETEFKKIKVLG--------SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 84 (327)
T ss_dssp CGGGEEEEEEEE--------EETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEE
T ss_pred CHHHcccceEEe--------eCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEE
Confidence 345699999999 9999999999998887654 7776654 345678899999999999999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
++.+. ..++|+||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+|
T Consensus 85 ~~~~~---~~~~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivH~Dikp~NIll~~~~~~k 157 (327)
T 3poz_A 85 ICLTS---TVQLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLE-DRRLVHRDLAARNVLVKTPQHVK 157 (327)
T ss_dssp EEESS---SEEEEEECCTTCBHHHHHHH---STTSCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEEEETTEEE
T ss_pred EEecC---CeEEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHh-hCCeeCCCCChheEEECCCCCEE
Confidence 99875 4788899988 79888843 2357899999999999999999999 89999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc----------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS---------- 271 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~---------- 271 (852)
|+|||+++....... ........+|..|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 158 l~Dfg~a~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~ 235 (327)
T 3poz_A 158 ITDFGLAKLLGAEEK--EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 235 (327)
T ss_dssp ECCTTHHHHHTTTCC---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT
T ss_pred EccCcceeEccCCcc--cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcC
Confidence 999999986543221 111223456779999999988889999999999999999999 9999965322
Q ss_pred --ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 --LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 --l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......++..+..++.+||..+|.+||++.++++++
T Consensus 236 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l 273 (327)
T 3poz_A 236 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEF 273 (327)
T ss_dssp CCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred CCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 223456788999999999999999999999999874
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=329.56 Aligned_cols=242 Identities=15% Similarity=0.193 Sum_probs=195.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC-------------chHHHHHHHHHHHhCCCCCc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD-------------TYEPALSYVKKLKTLRHPSI 119 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~-------------~~~~~~~E~~~Lk~LrHPnI 119 (852)
..+|++++.|| .|++|.||.|.+.. |..|+||++.... ....+.+|+++|++++||||
T Consensus 21 ~~~y~~~~~lg--------~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 21 QSPYTVQRFIS--------SGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp TCSCEEEEEEE--------EETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred ccceEEeEEec--------cCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 45699999999 99999999999864 8999999986511 12678999999999999999
Q ss_pred ceEeeeEEcC---CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE
Q psy3914 120 LTFLDSVESP---SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI 195 (852)
Q Consensus 120 lk~~d~~e~~---~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV 195 (852)
+++++++... ....+|+||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||++
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD---QRIVISPQHIQYFMYHILLGLHVLH-EAGVVHRDLHPGNILL 167 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEE
T ss_pred cceeeeEEeccCCCcceEEEEEccCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH-HCcCEecCCChHHEEE
Confidence 9999998542 2257999999999 78887742 3357899999999999999999999 8999999999999999
Q ss_pred ccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-
Q psy3914 196 NSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS- 273 (852)
Q Consensus 196 ~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~- 273 (852)
+.+|.+||+|||++...... .......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.....
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~ 242 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTAD-----ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ 242 (362)
T ss_dssp CTTCCEEECCTTC--------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cCCCCEEEEecCcccccccc-----cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99999999999998743221 11223567889999999854 678999999999999999999999996542110
Q ss_pred ------------------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCC
Q psy3914 274 ------------------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPG 311 (852)
Q Consensus 274 ------------------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~ 311 (852)
....+++.+.+++.+||..||.+|||+.++++|
T Consensus 243 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h----- 317 (362)
T 3pg1_A 243 LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH----- 317 (362)
T ss_dssp HHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS-----
T ss_pred HHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC-----
Confidence 123567889999999999999999999999998
Q ss_pred CCCcch
Q psy3914 312 GYFKND 317 (852)
Q Consensus 312 ~fF~n~ 317 (852)
+||++.
T Consensus 318 p~f~~~ 323 (362)
T 3pg1_A 318 PYFESL 323 (362)
T ss_dssp GGGTTT
T ss_pred chhhhc
Confidence 888753
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=326.93 Aligned_cols=241 Identities=15% Similarity=0.211 Sum_probs=202.5
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEc---CCCeEEEEEEEeC------CCchHHHHHHHHHHHhC-CCCCcceEe
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK---GSNEKVTIFLNDS------ADTYEPALSYVKKLKTL-RHPSILTFL 123 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k---~~g~~VaVKv~~~------~~~~~~~~~E~~~Lk~L-rHPnIlk~~ 123 (852)
.+|++.+.|| .|+||.||+|++. .+|+.|+||++.. ......+.+|+++|+.+ .||||++++
T Consensus 54 ~~y~~~~~lG--------~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~ 125 (355)
T 1vzo_A 54 ENFELLKVLG--------TGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLH 125 (355)
T ss_dssp GGEEEEEEEE--------ETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEE
T ss_pred cceEEEEEec--------cCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEE
Confidence 4699999999 9999999999985 5889999999875 23445677899999999 599999999
Q ss_pred eeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcE
Q psy3914 124 DSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEW 201 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~ 201 (852)
++++.. ..+||||||+. +|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+||+++.+|.+
T Consensus 126 ~~~~~~--~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~ 198 (355)
T 1vzo_A 126 YAFQTE--TKLHLILDYINGGELFTHLSQR----ERFTEHEVQIYVGEIVLALEHLH-KLGIIYRDIKLENILLDSNGHV 198 (355)
T ss_dssp EEEEET--TEEEEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTSCE
T ss_pred EEEeeC--ceEEEEeecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEECCCCcE
Confidence 999988 89999999998 799988532 57899999999999999999999 8999999999999999999999
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccccC--CCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS--HVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-------- 271 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~--~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-------- 271 (852)
||+|||+++.+..... .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.....
T Consensus 199 kl~DfG~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~ 275 (355)
T 1vzo_A 199 VLTDFGLSKEFVADET---ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS 275 (355)
T ss_dssp EESCSSEEEECCGGGG---GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHH
T ss_pred EEeeCCCCeecccCCC---CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHH
Confidence 9999999875432111 11224568999999999853 4578899999999999999999999953321
Q ss_pred -------ccCcCCCChhHHHHHHHhccCCCCCCC-----CHHHHHHhhcCCCCCCcch
Q psy3914 272 -------LSNIDNIPENLKRVYLELISERPNQRP-----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 272 -------l~~~~~ip~~L~~li~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n~ 317 (852)
......++..+.++|.+||..||.+|| ++.++++| +||...
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h-----~~f~~~ 328 (355)
T 1vzo_A 276 RRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH-----LFFQKI 328 (355)
T ss_dssp HHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS-----GGGTTC
T ss_pred HHHhccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC-----cchhcC
Confidence 122457788999999999999999999 99999997 788753
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-35 Score=314.19 Aligned_cols=236 Identities=14% Similarity=0.240 Sum_probs=201.8
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|+++.||.|+++.+++.|+||++.. ......+.+|+++++.++||||+++++++.+.
T Consensus 23 ~y~i~~~lg--------~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 93 (287)
T 2wei_A 23 RYNIVCMLG--------KGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS- 93 (287)
T ss_dssp HEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-
T ss_pred cceeeEEEc--------CCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCC-
Confidence 599999999 99999999999999999999999976 34567889999999999999999999999987
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC---CcEEEcc
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC---GEWKLGG 205 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~---g~~KL~D 205 (852)
..+|+||||+. +|.+++... ..+++..+..++.||+.||.||| ..+++||||+|+||+|+.+ +.+||+|
T Consensus 94 -~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH-~~~i~H~dl~p~NIlv~~~~~~~~~kL~D 167 (287)
T 2wei_A 94 -SSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMH-KHNIVHRDLKPENILLESKEKDCDIKIID 167 (287)
T ss_dssp -SEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEESCSSTTCCEEECS
T ss_pred -CeEEEEEEccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCChhhEEEecCCCcccEEEec
Confidence 89999999997 788877432 56899999999999999999999 8999999999999999764 4699999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-------------- 271 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-------------- 271 (852)
||++....... ......+++.|+|||++.+. ++.++|||||||++|+|++|..||.+...
T Consensus 168 fg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 241 (287)
T 2wei_A 168 FGLSTCFQQNT-----KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF 241 (287)
T ss_dssp TTGGGTBCCCS-----SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred cCcceeecCCC-----ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 99987543221 11233467799999998654 78899999999999999999999965321
Q ss_pred -ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 272 -LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 272 -l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
......+|+.+.+++++||..+|.+||++.++++| +||+.
T Consensus 242 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h-----p~~~~ 282 (287)
T 2wei_A 242 DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH-----PWIQK 282 (287)
T ss_dssp CSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS-----HHHHH
T ss_pred CchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC-----HHHhc
Confidence 12235789999999999999999999999999997 66643
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-36 Score=334.38 Aligned_cols=238 Identities=16% Similarity=0.220 Sum_probs=200.0
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
..|++++.|| .|++|.||.|+.+.+++.|+||++.... ....+.+|+++|+.++||||+++++++...
T Consensus 114 ~~~~~~~~lG--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~- 184 (377)
T 3cbl_A 114 EDLVLGEQIG--------RGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK- 184 (377)
T ss_dssp GGEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSS-
T ss_pred HHeEEeeEec--------cCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecC-
Confidence 4699999999 9999999999999999999999987632 223567899999999999999999999887
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+||||||+. +|.+++... ...++...+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||+
T Consensus 185 -~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivHrDlkp~Nil~~~~~~~kl~DfG~ 259 (377)
T 3cbl_A 185 -QPIYIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLE-SKCCIHRDLAARNCLVTEKNVLKISDFGM 259 (377)
T ss_dssp -SSCEEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred -CCcEEEEEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH-HCCcCCcccCHHHEEEcCCCcEEECcCCC
Confidence 88999999997 799998532 245889999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCc
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNI 275 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~ 275 (852)
++...+.... .......++..|+|||++....++.++|||||||++|||++ |..||.+... ...+
T Consensus 260 s~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~ 337 (377)
T 3cbl_A 260 SREEADGVYA--ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCP 337 (377)
T ss_dssp CEECTTSEEE--CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCC
T ss_pred ceecCCCcee--ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 8743321110 01111234567999999977778899999999999999998 8999865321 2234
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
..+|+.+.+++.+||..||.+|||+.++++.+
T Consensus 338 ~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L 369 (377)
T 3cbl_A 338 ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQEL 369 (377)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 67899999999999999999999999998864
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=330.20 Aligned_cols=250 Identities=17% Similarity=0.219 Sum_probs=203.7
Q ss_pred cccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-CchHHHHHHHHHHHhCC--------
Q psy3914 45 FFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-DTYEPALSYVKKLKTLR-------- 115 (852)
Q Consensus 45 ~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-~~~~~~~~E~~~Lk~Lr-------- 115 (852)
.+..++....+|++.+.|| .|++|+||+|+++.+++.|+||++... .....+.+|+++++.++
T Consensus 10 ~~~~~~~~~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~ 81 (373)
T 1q8y_A 10 AFKGEPYKDARYILVRKLG--------WGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKED 81 (373)
T ss_dssp CCTTCEETTTTEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHH
T ss_pred eecCCcccCCeEEEEEeee--------ecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchh
Confidence 4445566677899999999 999999999999999999999999862 23456788999998886
Q ss_pred ---CCCcceEeeeEEcCC--CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC-Cceeccc
Q psy3914 116 ---HPSILTFLDSVESPS--KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDA-DLRHNHV 188 (852)
Q Consensus 116 ---HPnIlk~~d~~e~~~--~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~-~ivH~DI 188 (852)
||||+++++++.... ...+|+|||++. +|.+++... ....+++..+..++.||+.||.||| +. |++||||
T Consensus 82 ~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH-~~~~ivH~Di 158 (373)
T 1q8y_A 82 SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKY--EHRGIPLIYVKQISKQLLLGLDYMH-RRCGIIHTDI 158 (373)
T ss_dssp HHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHH-HTTCEECSCC
T ss_pred ccccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHh--hccCCcHHHHHHHHHHHHHHHHHHH-hcCCEEecCC
Confidence 899999999988641 137999999998 799988542 2346899999999999999999999 65 9999999
Q ss_pred CCCCEEEcc------CCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhC
Q psy3914 189 NHTSIFINS------CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG 262 (852)
Q Consensus 189 kp~NIlV~~------~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG 262 (852)
||+||+|+. .+.+||+|||++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|
T Consensus 159 kp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g 231 (373)
T 1q8y_A 159 KPENVLMEIVDSPENLIQIKIADLGNACWYDEH-------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231 (373)
T ss_dssp SGGGEEEEEEETTTTEEEEEECCCTTCEETTBC-------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred ChHHeEEeccCCCcCcceEEEcccccccccCCC-------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhC
Confidence 999999954 347999999998754321 2234678899999999888889999999999999999999
Q ss_pred CCCCCCCcccc-----------------------------------------------------------CcCCCChhHH
Q psy3914 263 PLQSTNRKSLS-----------------------------------------------------------NIDNIPENLK 283 (852)
Q Consensus 263 ~~pf~~~~~l~-----------------------------------------------------------~~~~ip~~L~ 283 (852)
..||.+..... ....+++.+.
T Consensus 232 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (373)
T 1q8y_A 232 DFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS 311 (373)
T ss_dssp SCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHH
T ss_pred CCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHH
Confidence 99996432100 0112346788
Q ss_pred HHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 284 RVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 284 ~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
++|.+||..||.+|||+.++++| +||++.
T Consensus 312 ~li~~~L~~dP~~Rpt~~ell~h-----p~f~~~ 340 (373)
T 1q8y_A 312 DFLSPMLQLDPRKRADAGGLVNH-----PWLKDT 340 (373)
T ss_dssp HHHGGGGCSSTTTCBCHHHHHTC-----GGGTTC
T ss_pred HHHHHHhccCccccCCHHHHhhC-----hhhhcc
Confidence 99999999999999999999997 888764
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-35 Score=323.99 Aligned_cols=244 Identities=15% Similarity=0.191 Sum_probs=204.5
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CC--ch--------------HHHHHHHHHHH
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---AD--TY--------------EPALSYVKKLK 112 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~--~~--------------~~~~~E~~~Lk 112 (852)
...+|++++.|| .|++|.||.|.+ +|+.|+||++.. .. .. ..+.+|+.+++
T Consensus 29 ~~~~y~~~~~lg--------~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 98 (348)
T 2pml_X 29 YINDYRIIRTLN--------QGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIIT 98 (348)
T ss_dssp EETTEEEEEEEE--------CCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHT
T ss_pred ccCceEEEEEEc--------CCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHH
Confidence 345799999999 999999999999 899999999987 11 11 78999999999
Q ss_pred hCCCCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhh--hhc--CCCCCHHHHHHHHHHHHHHHHHHHhc-CCcee
Q psy3914 113 TLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNT--LKE--NNEKKQIYISWGIFQITRALSFLIND-ADLRH 185 (852)
Q Consensus 113 ~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~--~~~--~~~l~e~~i~~~l~QI~~aL~fLH~~-~~ivH 185 (852)
.++||||+++++++.+. +.+|+||||+. +|.+++... ... ...+++..+..++.||+.||.||| + .|++|
T Consensus 99 ~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~~i~H 175 (348)
T 2pml_X 99 DIKNEYCLTCEGIITNY--DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH-NEKNICH 175 (348)
T ss_dssp TCCCTTBCCCSEEEESS--SEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH-HTSCEEC
T ss_pred hCCCCCcceEEEEEeeC--CeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh-ccCCEee
Confidence 99999999999999988 89999999997 677762100 112 467999999999999999999999 6 99999
Q ss_pred cccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCC-CCCc-chhHHhHHHHHHHHHhCC
Q psy3914 186 NHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSH-VTKC-STDMYGLGILIWEVFNGP 263 (852)
Q Consensus 186 ~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~~~-~sDIwSLG~ll~el~tG~ 263 (852)
|||+|+||+++.+|.+||+|||++...... ......+++.|+|||++.+. .++. ++|||||||++|+|++|.
T Consensus 176 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~ 249 (348)
T 2pml_X 176 RDVKPSNILMDKNGRVKLSDFGESEYMVDK------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249 (348)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCEECBTT------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSS
T ss_pred cCCChHhEEEcCCCcEEEeccccccccccc------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCC
Confidence 999999999999999999999998754322 22345688899999999655 5555 899999999999999999
Q ss_pred CCCCCCcc------------ccCc-------------------CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCC
Q psy3914 264 LQSTNRKS------------LSNI-------------------DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGG 312 (852)
Q Consensus 264 ~pf~~~~~------------l~~~-------------------~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~ 312 (852)
.||.+... .... ..+|..+.+++.+||..||.+||++.++++| +
T Consensus 250 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h-----p 324 (348)
T 2pml_X 250 VPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH-----E 324 (348)
T ss_dssp CSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS-----G
T ss_pred CCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC-----c
Confidence 99965432 1111 5688999999999999999999999999997 8
Q ss_pred CCcchHH
Q psy3914 313 YFKNDLI 319 (852)
Q Consensus 313 fF~n~lv 319 (852)
||.+...
T Consensus 325 ~f~~~~~ 331 (348)
T 2pml_X 325 WLADTNI 331 (348)
T ss_dssp GGTTCCH
T ss_pred cccCCCH
Confidence 9976543
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=320.56 Aligned_cols=245 Identities=14% Similarity=0.155 Sum_probs=204.2
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEc-----CCCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEe
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK-----GSNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFL 123 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k-----~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~ 123 (852)
...+|++++.|| .|++|.||+|+++ .++..|+||++.... ....+.+|+++++.++||||++++
T Consensus 23 ~~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 23 AREKITMSRELG--------QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CGGGEEEEEEEE--------ECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred hhhheeeeeEec--------cCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 345699999999 9999999999886 357899999998632 234578999999999999999999
Q ss_pred eeEEcCCCCeEEEEEeecc--cHHHHHHhhhhc------CCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE
Q psy3914 124 DSVESPSKSLVYLAVEYVE--PIFYHLDNTLKE------NNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI 195 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~------~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV 195 (852)
+++.+. ...|+||||+. +|.+++...... ...++...+..++.||+.||.||| +.|++||||||+||++
T Consensus 95 ~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQG--QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN-ANKFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSS--SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH-HTTCBCSCCSGGGEEE
T ss_pred EEEccC--CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH-HCCCccCCCccceEEE
Confidence 999887 88999999997 799998643211 245789999999999999999999 8999999999999999
Q ss_pred ccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc---
Q psy3914 196 NSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS--- 271 (852)
Q Consensus 196 ~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~--- 271 (852)
+.+|.+||+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 249 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDY--YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 249 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGC--EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH
T ss_pred cCCCeEEECcCccccccccccc--cccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH
Confidence 9999999999999875433211 111223456778999999977778999999999999999999 8899865321
Q ss_pred ---------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcC
Q psy3914 272 ---------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRK 309 (852)
Q Consensus 272 ---------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~ 309 (852)
......+|..+.+++.+||..||.+||++.+++++++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~ 296 (322)
T 1p4o_A 250 LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296 (322)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 22346789999999999999999999999999998753
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=323.69 Aligned_cols=237 Identities=14% Similarity=0.113 Sum_probs=192.7
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC-
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS- 130 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~- 130 (852)
..+|++++.|| .|++|+||+|+.. ++.||||++.. ........+|+.+|+.++||||+++++++....
T Consensus 23 ~~~y~~~~~lg--------~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 92 (322)
T 3soc_A 23 SMPLQLLEVKA--------RGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTS 92 (322)
T ss_dssp TEEEEEEEEEE--------CSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS
T ss_pred hhhchhhheec--------ccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCC
Confidence 35699999999 9999999999884 89999999976 223345667889999999999999999998742
Q ss_pred -CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC----------CceecccCCCCEEEcc
Q psy3914 131 -KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDA----------DLRHNHVNHTSIFINS 197 (852)
Q Consensus 131 -~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~----------~ivH~DIkp~NIlV~~ 197 (852)
...+|+||||+. +|.+++.. ..+++..+..++.||+.||.||| +. +++||||||+||+++.
T Consensus 93 ~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH-~~~~~l~~~~~~~ivH~Dlkp~Nill~~ 166 (322)
T 3soc_A 93 VDVDLWLITAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLH-EDIPGLKDGHKPAISHRDIKSKNVLLKN 166 (322)
T ss_dssp SSEEEEEEEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHT-CCEEEETTEEECEEECSCCSGGGEEECT
T ss_pred CCceEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-hhccccccccCCCEEeCCCChHhEEECC
Confidence 245899999997 79999843 45899999999999999999999 78 9999999999999999
Q ss_pred CCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccC-----CCCCcchhHHhHHHHHHHHHhCCCCCCCCccc
Q psy3914 198 CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-----HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL 272 (852)
Q Consensus 198 ~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-----~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l 272 (852)
++.+||+|||++........ ........||+.|+|||++.+ ..++.++|||||||++|||++|..||.+....
T Consensus 167 ~~~~kL~DFg~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~ 244 (322)
T 3soc_A 167 NLTACIADFGLALKFEAGKS--AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDE 244 (322)
T ss_dssp TCCEEECCCTTCEEECTTSC--CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCC
T ss_pred CCeEEEccCCcccccccccC--ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcch
Confidence 99999999999975543221 122233578999999999854 34456789999999999999999998643221
Q ss_pred cC-------------------------cCC---------CChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 273 SN-------------------------IDN---------IPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 273 ~~-------------------------~~~---------ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.. ... .++.+.+++.+||..||.+|||+.++++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 313 (322)
T 3soc_A 245 YMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERI 313 (322)
T ss_dssp CCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 10 011 123499999999999999999999999874
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-35 Score=320.77 Aligned_cols=238 Identities=16% Similarity=0.215 Sum_probs=199.2
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEE--EEEEEeC---CCchHHHHHHHHHHHhC-CCCCcceEeeeEE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKV--TIFLNDS---ADTYEPALSYVKKLKTL-RHPSILTFLDSVE 127 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~V--aVKv~~~---~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e 127 (852)
.+|++++.|| .|++|.||+|+++.+|..+ +||.+.. ......+.+|+.+++++ +||||++++++++
T Consensus 25 ~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 96 (327)
T 1fvr_A 25 NDIKFQDVIG--------EGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE 96 (327)
T ss_dssp GGCEEEEEEE--------CGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEE
T ss_pred HHccceeeee--------cCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeee
Confidence 4699999999 9999999999999899865 8998876 33455688999999999 8999999999999
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhh------------hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCE
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTL------------KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSI 193 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~------------~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NI 193 (852)
+. +.+|+||||+. +|.+++.... .....+++..+..++.||+.||.||| +.+++||||||+||
T Consensus 97 ~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~dlkp~NI 173 (327)
T 1fvr_A 97 HR--GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS-QKQFIHRDLAARNI 173 (327)
T ss_dssp ET--TEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGE
T ss_pred eC--CceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH-hCCccCCCCccceE
Confidence 88 89999999996 7999985432 22357899999999999999999999 89999999999999
Q ss_pred EEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-
Q psy3914 194 FINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS- 271 (852)
Q Consensus 194 lV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~- 271 (852)
+++.+|.+||+|||++...... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 174 l~~~~~~~kL~Dfg~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~ 248 (327)
T 1fvr_A 174 LVGENYVAKIADFGLSRGQEVY-----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA 248 (327)
T ss_dssp EECGGGCEEECCTTCEESSCEE-----CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred EEcCCCeEEEcccCcCcccccc-----ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH
Confidence 9999999999999998632211 11122345778999999977778899999999999999998 9999965421
Q ss_pred -----------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -----------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -----------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|+.+.+++.+||..+|.+||++.++++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 295 (327)
T 1fvr_A 249 ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 295 (327)
T ss_dssp HHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 223457889999999999999999999999999874
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-35 Score=320.04 Aligned_cols=241 Identities=18% Similarity=0.259 Sum_probs=205.6
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC--------CchHHHHHHHHHHHhCC--CCCcce
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA--------DTYEPALSYVKKLKTLR--HPSILT 121 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~--------~~~~~~~~E~~~Lk~Lr--HPnIlk 121 (852)
...+|++++.|| .|++|.||+|+++.+|+.|+||++... .....+.+|+.+++.++ ||||++
T Consensus 41 ~~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~ 112 (320)
T 3a99_A 41 LESQYQVGPLLG--------SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 112 (320)
T ss_dssp CTTTEEEEEECS--------SSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCC
T ss_pred ccCceEEEEEEe--------eCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceE
Confidence 455799999999 999999999999999999999999872 12245678999999997 599999
Q ss_pred EeeeEEcCCCCeEEEEEeecc---cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEc-c
Q psy3914 122 FLDSVESPSKSLVYLAVEYVE---PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN-S 197 (852)
Q Consensus 122 ~~d~~e~~~~~~~yIVtE~v~---~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~-~ 197 (852)
+++++... +.+|+|+|++. +|.+++.. .+.+++..+..++.||+.||.||| +.+++||||||+||+++ .
T Consensus 113 ~~~~~~~~--~~~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dlkp~NIll~~~ 185 (320)
T 3a99_A 113 LLDWFERP--DSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLN 185 (320)
T ss_dssp EEEEEECS--SEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEEETT
T ss_pred EEEEEecC--CcEEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH-HCCcEeCCCCHHHEEEeCC
Confidence 99999987 89999999986 68888843 267899999999999999999999 89999999999999999 7
Q ss_pred CCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCC-CCcchhHHhHHHHHHHHHhCCCCCCCCc-----c
Q psy3914 198 CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHV-TKCSTDMYGLGILIWEVFNGPLQSTNRK-----S 271 (852)
Q Consensus 198 ~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-~~~~sDIwSLG~ll~el~tG~~pf~~~~-----~ 271 (852)
+|.+||+|||++...... ......||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.. .
T Consensus 186 ~~~~kL~Dfg~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 259 (320)
T 3a99_A 186 RGELKLIDFGSGALLKDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 259 (320)
T ss_dssp TTEEEECCCTTCEECCSS------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCC
T ss_pred CCCEEEeeCccccccccc------cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhccc
Confidence 899999999998754321 122456888999999984444 4678999999999999999999996432 2
Q ss_pred ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchH
Q psy3914 272 LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 272 l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~l 318 (852)
......+|+.+.+++.+||..||.+||++.++++| +||++.+
T Consensus 260 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h-----p~~~~~~ 301 (320)
T 3a99_A 260 VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH-----PWMQDVL 301 (320)
T ss_dssp CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS-----GGGSSCC
T ss_pred ccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC-----HhhcCcc
Confidence 23346789999999999999999999999999997 8988754
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-35 Score=326.57 Aligned_cols=243 Identities=16% Similarity=0.276 Sum_probs=204.0
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcC-------CCeEEEEEEEeCCC---chHHHHHHHHHHHhC-CCCCcc
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-------SNEKVTIFLNDSAD---TYEPALSYVKKLKTL-RHPSIL 120 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-------~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~L-rHPnIl 120 (852)
...+|.+++.|| .|++|+||+|++.. ++..|+||++.... ....+.+|+++++.+ +||||+
T Consensus 67 ~~~~y~i~~~LG--------~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv 138 (382)
T 3tt0_A 67 PRDRLVLGKPLG--------EGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNII 138 (382)
T ss_dssp CGGGEEEEEEEE--------ECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred chhheEeeeEEe--------cCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhh
Confidence 345799999999 99999999999754 34689999998732 335688999999999 899999
Q ss_pred eEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceec
Q psy3914 121 TFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLK------------ENNEKKQIYISWGIFQITRALSFLINDADLRHN 186 (852)
Q Consensus 121 k~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~ 186 (852)
++++++.+. +.+||||||+. +|.+++..... ....+++..+..++.||+.||.||| +.+++||
T Consensus 139 ~~~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~ 215 (382)
T 3tt0_A 139 NLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA-SKKCIHR 215 (382)
T ss_dssp CEEEEECSS--SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCS
T ss_pred hheeeeccC--CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH-hCCEecC
Confidence 999999987 88999999997 79999964321 1245899999999999999999999 8999999
Q ss_pred ccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCC
Q psy3914 187 HVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQ 265 (852)
Q Consensus 187 DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~p 265 (852)
||||+||+++.+|.+||+|||++........ ........+|+.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 216 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p 293 (382)
T 3tt0_A 216 DLAARNVLVTEDNVMKIADFGLARDIHHIDY--YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293 (382)
T ss_dssp CCCGGGEEECTTCCEEECSCSCCCCSSCCCT--TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred CCCcceEEEcCCCcEEEcccCcccccccccc--cccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999875432211 122223456778999999988889999999999999999999 9999
Q ss_pred CCCCc------------cccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 266 STNRK------------SLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 266 f~~~~------------~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
|.+.. .......+++.+.+++.+||..+|.+||++.++++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 347 (382)
T 3tt0_A 294 YPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 347 (382)
T ss_dssp STTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 86532 1233567899999999999999999999999999985
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=324.84 Aligned_cols=243 Identities=15% Similarity=0.144 Sum_probs=200.7
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
...+|++.+.|| .|++|+||+|+.+ +|+.|+||++... .....+.+|+++++.++||||+++++++.+
T Consensus 28 ~~~~y~~~~~lg--------~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 98 (326)
T 3uim_A 28 ASDNFSNKNILG--------RGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT 98 (326)
T ss_dssp TTTSSCSTTEEE--------CCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECC
T ss_pred HhhccccceeEe--------cCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEec
Confidence 345699999999 9999999999854 6899999998762 223368999999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC---CceecccCCCCEEEccCCcEEE
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDA---DLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~---~ivH~DIkp~NIlV~~~g~~KL 203 (852)
. +..|+||||+. +|.+++.........+++..+..++.||+.||.||| +. +++||||||+||+++.++.+||
T Consensus 99 ~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 99 P--TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH-DHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp S--SCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH-HSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred C--CceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 7 88999999997 799999654444556999999999999999999999 77 9999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-------------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK------------- 270 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~------------- 270 (852)
+|||++....... ........||+.|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus 176 ~Dfg~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 252 (326)
T 3uim_A 176 GDFGLAKLMDYKD---THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252 (326)
T ss_dssp CCCSSCEECCSSS---SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH
T ss_pred ccCccccccCccc---ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHH
Confidence 9999987543211 112223558999999999977778999999999999999999999984110
Q ss_pred -------cccC----------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcC
Q psy3914 271 -------SLSN----------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRK 309 (852)
Q Consensus 271 -------~l~~----------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~ 309 (852)
.... ....+..+.+++.+||..||.+|||+.+++++++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 0000 01123678999999999999999999999999764
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=315.09 Aligned_cols=235 Identities=17% Similarity=0.178 Sum_probs=199.0
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCC-------eEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceE
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN-------EKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTF 122 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g-------~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~ 122 (852)
...+|++.+.|| .|++|+||+|+++.++ ..|++|++.. ....+.+.+|+++++.++||||+++
T Consensus 6 ~~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 77 (289)
T 4fvq_A 6 RNEDLIFNESLG--------QGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLN 77 (289)
T ss_dssp CGGGEEEEEEEE--------EETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCE
T ss_pred chhHeeeeeeec--------cCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEE
Confidence 345699999999 9999999999998877 5799999976 3456788999999999999999999
Q ss_pred eeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc
Q psy3914 123 LDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE 200 (852)
Q Consensus 123 ~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~ 200 (852)
++++.+. +..|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++||||||+||+++.++.
T Consensus 78 ~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dlkp~NIll~~~~~ 151 (289)
T 4fvq_A 78 YGVCVCG--DENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLE-ENTLIHGNVCAKNILLIREED 151 (289)
T ss_dssp EEEECCT--TCCEEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEEEECCB
T ss_pred EEEEEeC--CCCEEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHh-hCCeECCCcCcceEEEecCCc
Confidence 9999987 88999999997 799998542 234899999999999999999999 899999999999999999887
Q ss_pred --------EEEcccchhhccccccCCCCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhC-CCCCCCCc
Q psy3914 201 --------WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNG-PLQSTNRK 270 (852)
Q Consensus 201 --------~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG-~~pf~~~~ 270 (852)
+||+|||++..... .....+++.|+|||++.+ ..++.++|||||||++|+|++| .+|+....
T Consensus 152 ~~~~~~~~~kl~Dfg~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~ 223 (289)
T 4fvq_A 152 RKTGNPPFIKLSDPGISITVLP--------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD 223 (289)
T ss_dssp GGGTBCCEEEECCCCSCTTTSC--------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred ccccccceeeeccCcccccccC--------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc
Confidence 99999999864321 112346778999999855 6789999999999999999996 45553321
Q ss_pred c----------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 271 S----------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 271 ~----------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
. ......+++.+.+++.+||..||.+|||+.++++++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 271 (289)
T 4fvq_A 224 SQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLN 271 (289)
T ss_dssp HHHHHHHHHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred hHHHHHHhhccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1 1234567889999999999999999999999999975
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-35 Score=313.07 Aligned_cols=242 Identities=13% Similarity=0.192 Sum_probs=199.0
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCe---EEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE---KVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~---~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
...|.+++.|| .|++|+||+|++..++. .|+||++.... ..+.+.+|+.+++.++||||+++++++
T Consensus 20 ~~~~~~~~~lg--------~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 91 (298)
T 3pls_A 20 RVVTHSDRVIG--------KGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIM 91 (298)
T ss_dssp GEEEEEEEEEE--------EETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred ceEEccCceec--------cCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence 34588899999 99999999999766554 79999998622 345678999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
.+. ....|+||||+. +|.+++.. ....+++..+..++.||+.||.||| +.|++||||||+||+++.+|.+||+
T Consensus 92 ~~~-~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH-~~~i~H~dikp~Nili~~~~~~kl~ 166 (298)
T 3pls_A 92 LPP-EGLPHVLLPYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLA-EQKFVHRDLAARNCMLDESFTVKVA 166 (298)
T ss_dssp CCS-SSCCEEEECCCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECTTCCEEEC
T ss_pred ecC-CCCcEEEEecccCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCcceEEEcCCCcEEeC
Confidence 865 234599999997 79998843 2357899999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCC-CCCCcc------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQ-STNRKS------------ 271 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~p-f~~~~~------------ 271 (852)
|||++..................+++.|+|||.+.+..++.++|||||||++|+|++|..| |.+...
T Consensus 167 Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 246 (298)
T 3pls_A 167 DFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR 246 (298)
T ss_dssp CTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCC
T ss_pred cCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCC
Confidence 9999875543322222233345677899999999888899999999999999999996544 433221
Q ss_pred ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|+.+.+++.+||..||.+|||+.++++.+
T Consensus 247 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l 282 (298)
T 3pls_A 247 LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEV 282 (298)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 223456889999999999999999999999999864
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=319.15 Aligned_cols=239 Identities=13% Similarity=0.167 Sum_probs=195.2
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEE----EEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKV----TIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLD 124 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~V----aVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d 124 (852)
...+|++.+.|| .|++|+||+|.++.+++.| ++|.+.. ......+.+|+.+++.++||||+++++
T Consensus 13 ~~~~y~~~~~lG--------~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~ 84 (327)
T 3lzb_A 13 KETEFKKIKVLG--------SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 84 (327)
T ss_dssp CTTTEEEEEEEE--------ECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCE
T ss_pred CHhHceEEEEee--------eCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEE
Confidence 456799999999 9999999999998888765 6666644 346678999999999999999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
++... . .++|+|++. +|.+++... ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+|
T Consensus 85 ~~~~~--~-~~~v~~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dikp~NIl~~~~~~~k 157 (327)
T 3lzb_A 85 ICLTS--T-VQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLE-DRRLVHRDLAARNVLVKTPQHVK 157 (327)
T ss_dssp EEESS--S-EEEEECCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEEEETTEEE
T ss_pred EEecC--C-ceEEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHh-hCCCcCCCCCHHHEEEcCCCCEE
Confidence 99875 4 788899988 798888532 357899999999999999999999 89999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc----------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS---------- 271 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~---------- 271 (852)
|+|||++........ ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 158 L~DfG~a~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~ 235 (327)
T 3lzb_A 158 ITDFGLAKLLGAEEK--EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 235 (327)
T ss_dssp ECCTTC------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT
T ss_pred EccCcceeEccCccc--cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC
Confidence 999999975533211 111223456778999999988889999999999999999999 9999965422
Q ss_pred --ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 --LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 --l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......++..+.+++++||..||.+||++.++++.+
T Consensus 236 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 273 (327)
T 3lzb_A 236 ERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEF 273 (327)
T ss_dssp CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 223456889999999999999999999999999864
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=323.10 Aligned_cols=243 Identities=10% Similarity=0.074 Sum_probs=196.2
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCC-----CeEEEEEEEeCCCc-------------hHHHHHHHHHHHhC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS-----NEKVTIFLNDSADT-------------YEPALSYVKKLKTL 114 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~-----g~~VaVKv~~~~~~-------------~~~~~~E~~~Lk~L 114 (852)
...|++++.|| .|+||.||+|.++.+ ++.|+||++..... ......++..++.+
T Consensus 34 ~~~y~~~~~lG--------~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l 105 (364)
T 3op5_A 34 AAAWKVGLPIG--------QGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKL 105 (364)
T ss_dssp CCEEEEEEECC--------CC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CCeEEEEEEEe--------cCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhc
Confidence 44699999999 999999999999775 58999999886221 11233445566777
Q ss_pred CCCCcceEeeeEEcCC--CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCC
Q psy3914 115 RHPSILTFLDSVESPS--KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHT 191 (852)
Q Consensus 115 rHPnIlk~~d~~e~~~--~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~ 191 (852)
+||||+++++++.... ..++||||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+|+||||||+
T Consensus 106 ~h~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH-~~~iiHrDlkp~ 181 (364)
T 3op5_A 106 KYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEA---NAKRFSRKTVLQLSLRILDILEYIH-EHEYVHGDIKAS 181 (364)
T ss_dssp SCCCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGG
T ss_pred cCCCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHH-HCCeEEecCCHH
Confidence 8999999999987641 256899999998 79999853 2367999999999999999999999 899999999999
Q ss_pred CEEEc--cCCcEEEcccchhhccccccCCC---CcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCC
Q psy3914 192 SIFIN--SCGEWKLGGLEYMEKISEASCIP---MKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQS 266 (852)
Q Consensus 192 NIlV~--~~g~~KL~DFg~a~~~~~~~~~~---~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf 266 (852)
||+++ .++.+||+|||+++.+....... ........||+.|+|||++.+..++.++|||||||++|||++|..||
T Consensus 182 Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf 261 (364)
T 3op5_A 182 NLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPW 261 (364)
T ss_dssp GEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred HEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999 88999999999997654322111 11123456999999999998888999999999999999999999999
Q ss_pred CCCcccc----------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 267 TNRKSLS----------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 267 ~~~~~l~----------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.+..... ....+|+.+.+++..||..+|..||++.++++.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l 324 (364)
T 3op5_A 262 EDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDIL 324 (364)
T ss_dssp GGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred cccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 6421110 0157899999999999999999999999998763
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=321.86 Aligned_cols=242 Identities=13% Similarity=0.135 Sum_probs=202.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEE----EcCCCeEEEEEEEeCC--CchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGK----KKGSNEKVTIFLNDSA--DTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~----~k~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
.+|++.+.|| .|+++.||+|+ +..++..|+||++... ...+.+.+|+++++.++||||+++++++.
T Consensus 23 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 94 (327)
T 3lxl_A 23 RHLKYISQLG--------KGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSY 94 (327)
T ss_dssp GGEEEEEEEE--------EETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred hhhhhhhhcc--------CCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEe
Confidence 5699999999 99999999999 5678999999999873 23456899999999999999999999987
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
......+||||||+. +|.+++.... ..+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|
T Consensus 95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH-~~~ivH~Dikp~NIl~~~~~~~kl~D 170 (327)
T 3lxl_A 95 GPGRQSLRLVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLG-SRRCVHRDLAARNILVESEAHVKIAD 170 (327)
T ss_dssp CSSSCEEEEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEEETTEEEECC
T ss_pred cCCCceEEEEEeecCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH-hCCccCCCCChhhEEECCCCCEEEcc
Confidence 544478999999996 7999985422 45899999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-------------- 271 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-------------- 271 (852)
||++......... ........++..|+|||++.+..++.++|||||||++|+|++|..||.....
T Consensus 171 fg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~ 249 (327)
T 3lxl_A 171 FGLAKLLPLDKDY-YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPA 249 (327)
T ss_dssp GGGCEECCTTCSE-EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCH
T ss_pred cccceecccCCcc-ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhccccccccc
Confidence 9998754322111 1122234577789999999777788999999999999999999988743211
Q ss_pred -------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 272 -------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 272 -------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
......+|+.+.+++.+||..||.+||++.+++++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 299 (327)
T 3lxl_A 250 LSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLD 299 (327)
T ss_dssp HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1224578899999999999999999999999998864
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-35 Score=310.19 Aligned_cols=236 Identities=17% Similarity=0.246 Sum_probs=200.4
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcC----
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESP---- 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~---- 129 (852)
.+|++.+.|| .|+++.||+|+++.+|+.|+||++.... ..+.+|+++++.++||||++++++++..
T Consensus 11 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (284)
T 2a19_B 11 MDFKEIELIG--------SGGFGQVFKAKHRIDGKTYVIKRVKYNN--EKAEREVKALAKLDHVNIVHYNGCWDGFDYDP 80 (284)
T ss_dssp HHEEEEEEEE--------CSSSCCEEEEEETTTCCEEEEEEEECCS--GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred cccceeeeec--------cCCceEEEEEEEcCCCeEEEEEEecccc--HHHHHHHHHHHhCCCCCEEEEeeeEeccccCc
Confidence 3599999999 8999999999999999999999998632 4578999999999999999999988641
Q ss_pred ----------CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc
Q psy3914 130 ----------SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS 197 (852)
Q Consensus 130 ----------~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~ 197 (852)
....+|+||||+. +|.+++... ....+++..+..++.||+.||.||| +.+++||||||+||+++.
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 81 ETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIH-SKKLINRDLKPSNIFLVD 157 (284)
T ss_dssp --------CCEEEEEEEEECCCCSCBHHHHHHHG--GGSCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEEE
T ss_pred ccccccccccCcceEEEEEeccCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeeccCCHHHEEEcC
Confidence 1256899999998 799999543 2357899999999999999999999 899999999999999999
Q ss_pred CCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc------
Q psy3914 198 CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS------ 271 (852)
Q Consensus 198 ~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------ 271 (852)
++.+||+|||++....... ......+++.|+|||++.+..++.++|||||||++|+|++|..|+.....
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~ 232 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDG-----KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLR 232 (284)
T ss_dssp TTEEEECCCTTCEESSCCS-----CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHH
T ss_pred CCCEEECcchhheeccccc-----cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhh
Confidence 9999999999987543221 12234688899999999777889999999999999999999888732211
Q ss_pred -ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|..+.+++.+||..||.+||++.++++++
T Consensus 233 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l 269 (284)
T 2a19_B 233 DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 269 (284)
T ss_dssp TTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 112356889999999999999999999999999985
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=318.43 Aligned_cols=243 Identities=16% Similarity=0.274 Sum_probs=201.2
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEE-----cCCCeEEEEEEEeCCC---chHHHHHHHHHHHhC-CCCCcceEe
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKK-----KGSNEKVTIFLNDSAD---TYEPALSYVKKLKTL-RHPSILTFL 123 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~-----k~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~L-rHPnIlk~~ 123 (852)
..+|++++.|| .|++|+||+|++ ..+++.|+||++.... ....+.+|+++++.+ +||||++++
T Consensus 26 ~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 26 RDRLKLGKPLG--------RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp GGGEEEEEEEE--------ECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hhheeeeeEEc--------CCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 34699999999 999999999985 4567999999998732 334688999999999 699999999
Q ss_pred eeEEcCCCCeEEEEEeecc--cHHHHHHhhhhc------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccC
Q psy3914 124 DSVESPSKSLVYLAVEYVE--PIFYHLDNTLKE------------NNEKKQIYISWGIFQITRALSFLINDADLRHNHVN 189 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~------------~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIk 189 (852)
+++... ...+|+||||+. +|.+++...... ...+++..+..++.||+.||.||| +.+++|||||
T Consensus 98 ~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~i~H~dik 175 (316)
T 2xir_A 98 GACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLA 175 (316)
T ss_dssp EEECCT-TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH-HTTCCCSCCS
T ss_pred EEEecC-CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH-hCCcccccCc
Confidence 998764 256999999998 799999543211 123789999999999999999999 8999999999
Q ss_pred CCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCC
Q psy3914 190 HTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTN 268 (852)
Q Consensus 190 p~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~ 268 (852)
|+||+++.+|.+||+|||++....... .........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 176 ARNILLSEKNVVKICDFGLARDIYKDP--DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCT--TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cceEEECCCCCEEECCCccccccccCc--cceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999987543221 1122233456789999999977788999999999999999998 9999965
Q ss_pred Ccc-------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 269 RKS-------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 269 ~~~-------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
... ......+++.+.+++.+||..||.+||++.++++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 305 (316)
T 2xir_A 254 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305 (316)
T ss_dssp CCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 321 123456889999999999999999999999999985
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=321.04 Aligned_cols=244 Identities=9% Similarity=0.027 Sum_probs=196.1
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcC---CCeEEEEEEEeCCC-------------chHHHHHHHHHHHhCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG---SNEKVTIFLNDSAD-------------TYEPALSYVKKLKTLRH 116 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~---~g~~VaVKv~~~~~-------------~~~~~~~E~~~Lk~LrH 116 (852)
..+|++++.|| .|++|.||+|+++. ++..|+||++.... ....+.+|+..++.++|
T Consensus 36 ~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h 107 (345)
T 2v62_A 36 GNQWVLGKKIG--------SGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDY 107 (345)
T ss_dssp SCEEEEEEEC--------------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSC
T ss_pred CceEEEEeeEe--------ecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccc
Confidence 45799999999 99999999999987 78899999998622 12235677888999999
Q ss_pred CCcceEeeeEEcC--CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCE
Q psy3914 117 PSILTFLDSVESP--SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSI 193 (852)
Q Consensus 117 PnIlk~~d~~e~~--~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NI 193 (852)
|||+++++++... ....+||||||+. +|.+++.. .+.+++..+..++.||+.||.||| +.+++||||||+||
T Consensus 108 ~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dlkp~NI 182 (345)
T 2v62_A 108 LGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQ----NGTFKKSTVLQLGIRMLDVLEYIH-ENEYVHGDIKAANL 182 (345)
T ss_dssp CCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBG----GGBCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGE
T ss_pred cCcceeecccccccCCCcEEEEEEeccCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCcCHHHE
Confidence 9999999998871 1278999999998 79988843 237899999999999999999999 89999999999999
Q ss_pred EEccCC--cEEEcccchhhccccccCC---CCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCC
Q psy3914 194 FINSCG--EWKLGGLEYMEKISEASCI---PMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTN 268 (852)
Q Consensus 194 lV~~~g--~~KL~DFg~a~~~~~~~~~---~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~ 268 (852)
+++.++ .+||+|||+++.+...... .........||+.|+|||++.+..++.++|||||||++|||++|..||.+
T Consensus 183 ll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 262 (345)
T 2v62_A 183 LLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ 262 (345)
T ss_dssp EEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred EEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999887 9999999999765432211 11112345789999999999888899999999999999999999999943
Q ss_pred Ccccc-------------C---------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcC
Q psy3914 269 RKSLS-------------N---------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRK 309 (852)
Q Consensus 269 ~~~l~-------------~---------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~ 309 (852)
..... . ...+|+.+.+++.+||..||.+||++.++++.++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 325 (345)
T 2v62_A 263 NLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNP 325 (345)
T ss_dssp GTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCT
T ss_pred cccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 21100 0 11788999999999999999999999999998764
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-35 Score=314.96 Aligned_cols=242 Identities=12% Similarity=0.204 Sum_probs=196.2
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCC---eEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN---EKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g---~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
...|++++.|| .|++|+||+|+...++ ..|+||.+... ...+.+.+|+.++++++||||+++++++
T Consensus 24 ~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 95 (298)
T 3f66_A 24 SLIVHFNEVIG--------RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 95 (298)
T ss_dssp GEEEEEEEEEE--------EETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred ceehhhcceee--------ecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEE
Confidence 35699999999 9999999999976443 46899998762 2345688999999999999999999986
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
... .+..|+||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+
T Consensus 96 ~~~-~~~~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~ql~~~l~~lH-~~~i~H~dikp~Nil~~~~~~~kl~ 170 (298)
T 3f66_A 96 LRS-EGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLA-SKKFVHRDLAARNCMLDEKFTVKVA 170 (298)
T ss_dssp CCS-SSCCEEEEECCTTCBHHHHHHC---TTCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECTTCCEEEC
T ss_pred EcC-CCceEEEEeCCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH-hCCccCCCCchheEEECCCCCEEEC
Confidence 442 268899999998 79999843 2356889999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCccc-----------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKSL----------- 272 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~l----------- 272 (852)
|||++..................+|+.|+|||++.+..++.++|||||||++|+|++ |.+||.+....
T Consensus 171 Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
T 3f66_A 171 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 250 (298)
T ss_dssp SCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCC
T ss_pred cccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCC
Confidence 999998654332222222334567789999999977788999999999999999999 56666443221
Q ss_pred -cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 273 -SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 273 -~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.....+|+.+.+++.+||..||.+||++.++++.+
T Consensus 251 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L 286 (298)
T 3f66_A 251 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 286 (298)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 22456899999999999999999999999999864
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-35 Score=317.06 Aligned_cols=231 Identities=18% Similarity=0.267 Sum_probs=192.5
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
.+|++.+.|| .|++|+||+|+. .++.|+||++......+.+.+|+++|++++||||+++++++.+.
T Consensus 8 ~~~~~~~~lg--------~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---- 73 (307)
T 2eva_A 8 KEIEVEEVVG--------RGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP---- 73 (307)
T ss_dssp GGEEEEEEEE--------CCSSSEEEEEEE--TTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTTT----
T ss_pred hHeeeeeEee--------cCCCceEEEEEE--CCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC----
Confidence 4599999999 999999999988 47899999998766677899999999999999999999988643
Q ss_pred EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc---CCceecccCCCCEEEccCCc-EEEcccc
Q psy3914 134 VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLIND---ADLRHNHVNHTSIFINSCGE-WKLGGLE 207 (852)
Q Consensus 134 ~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~---~~ivH~DIkp~NIlV~~~g~-~KL~DFg 207 (852)
.|+||||+. +|.+++... .....++...+..++.||+.||.||| + .+++||||||+||+++.+|. +||+|||
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~~l~~LH-~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg 151 (307)
T 2eva_A 74 VCLVMEYAEGGSLYNVLHGA-EPLPYYTAAHAMSWCLQCSQGVAYLH-SMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 151 (307)
T ss_dssp TEEEEECCTTCBHHHHHHCS-SSEECCCHHHHHHHHHHHHHHHHHHH-TCSSSCCCCCCCSGGGEEEETTTTEEEECCCC
T ss_pred cEEEEEcCCCCCHHHHHhcc-CCCCccCHHHHHHHHHHHHHHHHHHH-hCCCCCeecCCCChhHEEEeCCCCEEEEcccc
Confidence 799999997 799998432 22234788899999999999999999 7 78999999999999999887 7999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------cc
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------LS 273 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------l~ 273 (852)
++...... .....||+.|+|||++.+..++.++|||||||++|+|++|..||..... ..
T Consensus 152 ~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (307)
T 2eva_A 152 TACDIQTH-------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 224 (307)
T ss_dssp C-------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCC
T ss_pred cccccccc-------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCC
Confidence 98744321 1234578899999999888899999999999999999999999953211 12
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
....+|+.+.+++.+||+.+|.+|||+.++++++
T Consensus 225 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 258 (307)
T 2eva_A 225 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 258 (307)
T ss_dssp CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 3467899999999999999999999999999874
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=312.66 Aligned_cols=238 Identities=16% Similarity=0.212 Sum_probs=196.7
Q ss_pred CCeeEec-cccCCCCCCcccCCceEEEEEE--EcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 54 FAYEVGE-PAVSFSGCFTQKHTFWKFHGGK--KKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 54 ~~Y~i~e-~Ig~~~g~~~~~Gs~~~Vy~a~--~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
.+|++.+ .|| .|++|+||+|. .+.++..|+||++... ...+.+.+|+++++.++||||+++++++
T Consensus 16 ~~y~~~~~~lg--------~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 87 (291)
T 1xbb_A 16 KLLTLEDKELG--------SGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC 87 (291)
T ss_dssp GGEEEEEEEEE--------ECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred hhhhhccCccc--------cccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 4699988 999 99999999995 4566899999999862 2256789999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
.. ..+|+||||+. +|.+++.. ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+
T Consensus 88 ~~---~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH-~~~i~H~dikp~Nil~~~~~~~kl~ 159 (291)
T 1xbb_A 88 EA---ESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLE-ESNFVHRDLAARNVLLVTQHYAKIS 159 (291)
T ss_dssp ES---SSEEEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEEETTEEEEC
T ss_pred CC---CCcEEEEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHH-hCCeEcCCCCcceEEEeCCCcEEEc
Confidence 54 57899999997 79998843 356899999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------ 271 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------ 271 (852)
|||++......... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 160 Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~ 238 (291)
T 1xbb_A 160 DFGLSKALRADENY-YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 238 (291)
T ss_dssp CCTTCEECCTTCSE-EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC
T ss_pred cCCcceeeccCCCc-ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC
Confidence 99998754322111 111112345678999999977778889999999999999999 9999965321
Q ss_pred ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 272 LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 272 l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
......+|+.+.+++.+||+.||.+||++.++++.++
T Consensus 239 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 239 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 2234678999999999999999999999999998753
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-35 Score=320.75 Aligned_cols=241 Identities=15% Similarity=0.259 Sum_probs=199.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEc-------CCCeEEEEEEEeCCC---chHHHHHHHHHHHhC-CCCCcceE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK-------GSNEKVTIFLNDSAD---TYEPALSYVKKLKTL-RHPSILTF 122 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k-------~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~L-rHPnIlk~ 122 (852)
.+|++++.|| .|++|.||.|++. .++..|+||++.... ....+.+|+++++.+ +||||+++
T Consensus 35 ~~y~~~~~lG--------~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 106 (334)
T 2pvf_A 35 DKLTLGKPLG--------EGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL 106 (334)
T ss_dssp GGEEEEEEEE--------ECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred hHeEEeeEEe--------ecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeE
Confidence 4699999999 9999999999976 457889999998632 345688999999999 89999999
Q ss_pred eeeEEcCCCCeEEEEEeecc--cHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceeccc
Q psy3914 123 LDSVESPSKSLVYLAVEYVE--PIFYHLDNTLK------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHV 188 (852)
Q Consensus 123 ~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DI 188 (852)
++++.+. +.+|+||||+. +|.+++..... ....++...+..++.||+.||.||| +.+++||||
T Consensus 107 ~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dl 183 (334)
T 2pvf_A 107 LGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA-SQKCIHRDL 183 (334)
T ss_dssp EEEECSS--SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH-HTTEECSCC
T ss_pred EEEEccC--CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCC
Confidence 9999987 88999999997 79999954321 1235889999999999999999999 899999999
Q ss_pred CCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCC
Q psy3914 189 NHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQST 267 (852)
Q Consensus 189 kp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~ 267 (852)
||+||+++.+|.+||+|||++....... .........+++.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 184 kp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 261 (334)
T 2pvf_A 184 AARNVLVTENNVMKIADFGLARDINNID--YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261 (334)
T ss_dssp SGGGEEECTTCCEEECCCTTCEECTTTS--SEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ccceEEEcCCCCEEEccccccccccccc--cccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcC
Confidence 9999999999999999999987543321 1112223456778999999977778899999999999999999 999996
Q ss_pred CCcc------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 268 NRKS------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 268 ~~~~------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+... ......++..+..++.+||..+|.+||++.++++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 313 (334)
T 2pvf_A 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313 (334)
T ss_dssp TCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 5321 223467899999999999999999999999999875
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=315.37 Aligned_cols=245 Identities=13% Similarity=0.158 Sum_probs=193.5
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcC---CCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG---SNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLD 124 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~---~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d 124 (852)
....|.+++.|| .|++|.||+|+... ++..|+||++... .....+.+|+.+++.++||||+++++
T Consensus 32 ~~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 103 (313)
T 3brb_A 32 DRNLLILGKILG--------EGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLG 103 (313)
T ss_dssp CGGGEEEEEEEE--------C-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCE
T ss_pred CHHHeeecccee--------ecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeE
Confidence 345699999999 99999999998875 4568999998762 22356889999999999999999999
Q ss_pred eEEcCCC---CeEEEEEeecc--cHHHHHHhhh--hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc
Q psy3914 125 SVESPSK---SLVYLAVEYVE--PIFYHLDNTL--KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS 197 (852)
Q Consensus 125 ~~e~~~~---~~~yIVtE~v~--~L~~~L~~~~--~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~ 197 (852)
++.+... ...|+||||+. +|.+++.... .....+++..+..++.||+.||.||| +.+++||||||+||+++.
T Consensus 104 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~dikp~NIli~~ 182 (313)
T 3brb_A 104 VCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS-NRNFLHRDLAARNCMLRD 182 (313)
T ss_dssp EEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH-TTTCCCCCCSGGGEEECT
T ss_pred EEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCcceEEEcC
Confidence 9987521 24699999998 7999884322 23456999999999999999999999 899999999999999999
Q ss_pred CCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-----
Q psy3914 198 CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS----- 271 (852)
Q Consensus 198 ~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~----- 271 (852)
+|.+||+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 183 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 260 (313)
T 3brb_A 183 DMTVCVADFGLSKKIYSGDY--YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYD 260 (313)
T ss_dssp TSCEEECSCSCC------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred CCcEEEeecCcceecccccc--cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHH
Confidence 99999999999875432211 111223456778999999988889999999999999999999 8888865322
Q ss_pred -------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|+.+.+++.+||..||.+||++.++++++
T Consensus 261 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 303 (313)
T 3brb_A 261 YLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQL 303 (313)
T ss_dssp HHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred HHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 223467889999999999999999999999999875
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-35 Score=331.05 Aligned_cols=241 Identities=11% Similarity=0.178 Sum_probs=200.1
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.+.+|++++.|| .|++|+||+|+++.+|+.|+||++.. ....+.+.+|+++|+.++||||+++++++..
T Consensus 7 ~~~~y~i~~~LG--------~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~ 78 (396)
T 4eut_A 7 SNHLWLLSDILG--------QGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE 78 (396)
T ss_dssp SSEEEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CCCceEEEEEEE--------cCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeecc
Confidence 456799999999 99999999999999999999999986 3456778899999999999999999999987
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE----ccCCcEE
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI----NSCGEWK 202 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV----~~~g~~K 202 (852)
......|+||||+. +|.+++.. ......+++..+..++.||+.||.||| +.+|+||||||+||++ +.++.+|
T Consensus 79 ~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~~~~~k 156 (396)
T 4eut_A 79 TTTRHKVLIMEFCPCGSLYTVLEE-PSNAYGLPESEFLIVLRDVVGGMNHLR-ENGIVHRNIKPGNIMRVIGEDGQSVYK 156 (396)
T ss_dssp TTTCCEEEEECCCTTEEHHHHTTS-GGGTTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEEEECTTSCEEEE
T ss_pred CCCCeeEEEEecCCCCCHHHHHHh-hhcccCCCHHHHHHHHHHHHHHHHHHH-HCCEEECCcCHHHEEEeecCCCceeEE
Confidence 64458999999997 79999843 233345999999999999999999999 8999999999999999 7778899
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccC--------CCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS--------HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS- 273 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~--------~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~- 273 (852)
|+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|..||.+.....
T Consensus 157 L~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~ 231 (396)
T 4eut_A 157 LTDFGAARELEDDE-----QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR 231 (396)
T ss_dssp ECCGGGCEECCCGG-----GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT
T ss_pred EecCCCceEccCCC-----ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc
Confidence 99999987543321 2224568999999999743 456779999999999999999999984321100
Q ss_pred -----------------------------------C----cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 274 -----------------------------------N----IDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 274 -----------------------------------~----~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
. ...+++.+.+++++||..||.+||++.++++.+
T Consensus 232 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l 304 (396)
T 4eut_A 232 NKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (396)
T ss_dssp CHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred hHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHH
Confidence 0 012345788999999999999999999998864
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-35 Score=318.04 Aligned_cols=240 Identities=16% Similarity=0.238 Sum_probs=196.1
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC--------chHHHHHHHHHHHhC----CCCCc
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD--------TYEPALSYVKKLKTL----RHPSI 119 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~--------~~~~~~~E~~~Lk~L----rHPnI 119 (852)
...+|++++.|| .|++|.||+|+++.+|+.|+||++.... ....+.+|+.+++++ +||||
T Consensus 29 ~~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i 100 (312)
T 2iwi_A 29 FEAEYRLGPLLG--------KGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGV 100 (312)
T ss_dssp ----CEEEEEEE--------EETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSB
T ss_pred hhhceEEeeEEE--------cCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCe
Confidence 345699999999 9999999999999999999999997621 223456789999998 89999
Q ss_pred ceEeeeEEcCCCCeEEEEEee-cc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEc
Q psy3914 120 LTFLDSVESPSKSLVYLAVEY-VE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN 196 (852)
Q Consensus 120 lk~~d~~e~~~~~~~yIVtE~-v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~ 196 (852)
+++++++.+. +..|+|+|+ +. +|.+++.. .+.+++..+..++.||+.||.||| +.+++||||||+||+++
T Consensus 101 ~~~~~~~~~~--~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~Nil~~ 173 (312)
T 2iwi_A 101 IRLLDWFETQ--EGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCH-SRGVVHRDIKDENILID 173 (312)
T ss_dssp CCEEEEC-------CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH-HHTEECCCCSGGGEEEE
T ss_pred eeEEEEEecC--CeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecCCChhhEEEe
Confidence 9999999887 889999999 44 79998853 256899999999999999999999 89999999999999999
Q ss_pred -cCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCC-CcchhHHhHHHHHHHHHhCCCCCCCCc----
Q psy3914 197 -SCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRK---- 270 (852)
Q Consensus 197 -~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~-~~~sDIwSLG~ll~el~tG~~pf~~~~---- 270 (852)
.+|.+||+|||++...... ......|+..|+|||++.+..+ +.++|||||||++|+|++|..||.+..
T Consensus 174 ~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 247 (312)
T 2iwi_A 174 LRRGCAKLIDFGSGALLHDE------PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILE 247 (312)
T ss_dssp TTTTEEEECCCSSCEECCSS------CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH
T ss_pred CCCCeEEEEEcchhhhcccC------cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhh
Confidence 7899999999998754321 1224568889999999854444 458999999999999999999996432
Q ss_pred -cccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 271 -SLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 271 -~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.......++..+.+++.+||..||.+||++.++++| +||+..
T Consensus 248 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~-----~~~~~~ 290 (312)
T 2iwi_A 248 AELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD-----PWMQTP 290 (312)
T ss_dssp TCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS-----TTTCC-
T ss_pred hccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC-----hhhcCc
Confidence 223346789999999999999999999999999998 899764
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=310.66 Aligned_cols=244 Identities=19% Similarity=0.247 Sum_probs=194.2
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC----
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESP---- 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~---- 129 (852)
+|++.+.|| .|++|.||.|+++.+|+.|+||++.. ......+.+|+.+++.++||||+++++++.+.
T Consensus 7 ~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (303)
T 1zy4_A 7 DFEEIAVLG--------QGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFV 78 (303)
T ss_dssp HEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCC
T ss_pred cchhhheec--------cCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchh
Confidence 599999999 99999999999999999999999976 33456788999999999999999999987642
Q ss_pred -------CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc
Q psy3914 130 -------SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE 200 (852)
Q Consensus 130 -------~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~ 200 (852)
....+|+||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH-~~~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWRLFRQILEALSYIH-SQGIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp C------CEEEEEEEEECCCSCBHHHHHHH---SCGGGCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTSC
T ss_pred hhhcccccCCceEEEEecCCCCCHHHhhhc---cccccchHHHHHHHHHHHHHHHHHH-hCCeecccCCHHhEEEcCCCC
Confidence 1267999999997 79999853 2245778899999999999999999 899999999999999999999
Q ss_pred EEEcccchhhccccccCC----------CCcccccccCCCcccCCccccC-CCCCcchhHHhHHHHHHHHHhCCCCCCCC
Q psy3914 201 WKLGGLEYMEKISEASCI----------PMKRYSRYEDQSTYQIPENSLS-HVTKCSTDMYGLGILIWEVFNGPLQSTNR 269 (852)
Q Consensus 201 ~KL~DFg~a~~~~~~~~~----------~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDIwSLG~ll~el~tG~~pf~~~ 269 (852)
+||+|||++......... .........|++.|+|||++.+ ..++.++|||||||++|+|++ ||...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~ 231 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence 999999998754321100 0112234568889999999854 468899999999999999998 33211
Q ss_pred -c---------------cccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchH
Q psy3914 270 -K---------------SLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 270 -~---------------~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~l 318 (852)
. .......+++.+.+++++||..||.+|||+.++++| +||....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h-----~~~~~~~ 291 (303)
T 1zy4_A 232 MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS-----GWLPVKH 291 (303)
T ss_dssp HHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS-----SCSCCCC
T ss_pred hhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC-----CCcCCCC
Confidence 0 011224567789999999999999999999999998 9997643
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=317.08 Aligned_cols=242 Identities=15% Similarity=0.175 Sum_probs=195.7
Q ss_pred CCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCC----eEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEe
Q psy3914 51 SKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN----EKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFL 123 (852)
Q Consensus 51 ~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g----~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~ 123 (852)
.....|++.+.|| .|++|+||+|+.+.++ ..|+||++.... ....+.+|+++++.++||||++++
T Consensus 41 i~~~~~~~~~~lG--------~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 112 (333)
T 1mqb_A 41 IHPSCVTRQKVIG--------AGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLE 112 (333)
T ss_dssp CCTTTEEEEEEEE--------ECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred CChHHhhcccEEe--------cCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEE
Confidence 3456799999999 9999999999987654 469999998622 334678999999999999999999
Q ss_pred eeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcE
Q psy3914 124 DSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEW 201 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~ 201 (852)
+++.+. +.+||||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+
T Consensus 113 ~~~~~~--~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dikp~NIl~~~~~~~ 186 (333)
T 1mqb_A 113 GVISKY--KPMMIITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLA-NMNYVHRDLAARNILVNSNLVC 186 (333)
T ss_dssp EEECSS--SSEEEEEECCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTCCE
T ss_pred EEEecC--CCcEEEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCCChheEEECCCCcE
Confidence 999987 88999999997 79998843 2357899999999999999999999 8999999999999999999999
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc---------
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS--------- 271 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~--------- 271 (852)
||+|||++.......... .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 187 kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~ 265 (333)
T 1mqb_A 187 KVSDFGLSRVLEDDPEAT-YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND 265 (333)
T ss_dssp EECCCCC------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT
T ss_pred EECCCCcchhhccccccc-cccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHC
Confidence 999999987654322111 11122345678999999987888999999999999999998 9999954321
Q ss_pred ---ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 ---LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 ---l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|..+.+++.+||..+|.+||++.++++++
T Consensus 266 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L 304 (333)
T 1mqb_A 266 GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 304 (333)
T ss_dssp TCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred CCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 223457899999999999999999999999999874
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-35 Score=319.01 Aligned_cols=243 Identities=16% Similarity=0.206 Sum_probs=196.4
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEE-----EcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEe
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGK-----KKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFL 123 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~-----~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~ 123 (852)
...+|++++.|| .|++|.||+|+ +..++..|+||++... .....+.+|+.+++.++||||++++
T Consensus 28 ~~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 99 (327)
T 2yfx_A 28 PRKNITLIRGLG--------HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI 99 (327)
T ss_dssp CGGGCEEEEECC----------CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ChhheEEEEEEc--------CCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEE
Confidence 445699999999 99999999999 5667889999999752 2345678899999999999999999
Q ss_pred eeEEcCCCCeEEEEEeecc--cHHHHHHhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC
Q psy3914 124 DSVESPSKSLVYLAVEYVE--PIFYHLDNTLK---ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC 198 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~---~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~ 198 (852)
+++.+. ...||||||+. +|.+++..... ....++...+..++.||+.||.||| +.+++||||||+||+++.+
T Consensus 100 ~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH-~~~i~H~dlkp~NIli~~~ 176 (327)
T 2yfx_A 100 GVSLQS--LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCP 176 (327)
T ss_dssp EEECSS--SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEESCS
T ss_pred EEEcCC--CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh-hCCeecCcCCHhHEEEecC
Confidence 999987 88999999996 79999964321 1245889999999999999999999 8999999999999999954
Q ss_pred C---cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc---
Q psy3914 199 G---EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS--- 271 (852)
Q Consensus 199 g---~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~--- 271 (852)
| .+||+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 177 ~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 254 (327)
T 2yfx_A 177 GPGRVAKIGDFGMARDIYRASY--YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 254 (327)
T ss_dssp STTCCEEECCCHHHHHHHC--------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred CCcceEEECccccccccccccc--cccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHH
Confidence 4 599999999875432211 112223557889999999977788999999999999999998 8899864321
Q ss_pred ---------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 ---------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 ---------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|..+.+++.+||+.||.+||++.++++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l 299 (327)
T 2yfx_A 255 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299 (327)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 223457899999999999999999999999999985
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=311.27 Aligned_cols=239 Identities=13% Similarity=0.181 Sum_probs=198.7
Q ss_pred CCeeEec-cccCCCCCCcccCCceEEEEEEEc--CCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 54 FAYEVGE-PAVSFSGCFTQKHTFWKFHGGKKK--GSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 54 ~~Y~i~e-~Ig~~~g~~~~~Gs~~~Vy~a~~k--~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
.+|.+.+ .|| .|++|.||+|+.+ .++..|+||++... ...+.+.+|+++++.++||||++++++++
T Consensus 9 ~~~~i~~~~lg--------~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 80 (287)
T 1u59_A 9 DNLLIADIELG--------CGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ 80 (287)
T ss_dssp GGEEEEEEEEE--------CCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred HHhhhhhcccc--------ccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec
Confidence 4577766 999 9999999999864 46789999999873 23456889999999999999999999995
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
. ..+|+||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|
T Consensus 81 ~---~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~Nili~~~~~~kl~D 153 (287)
T 1u59_A 81 A---EALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLE-EKNFVHRDLAARNVLLVNRHYAKISD 153 (287)
T ss_dssp S---SSEEEEEECCTTEEHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEEEETTEEEECC
T ss_pred C---CCcEEEEEeCCCCCHHHHHHh---CCccCCHHHHHHHHHHHHHHHHHHH-HCCEeeCCCchheEEEcCCCCEEECc
Confidence 4 56999999998 79988842 2356899999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------c
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------L 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l 272 (852)
||++......... ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+... .
T Consensus 154 fg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~ 232 (287)
T 1u59_A 154 FGLSKALGADDSY-YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM 232 (287)
T ss_dssp CTTCEECTTCSCE-ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC
T ss_pred ccceeeeccCcce-eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcC
Confidence 9998755322111 111223446789999999977778899999999999999998 9999964322 2
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
.....+|+.+.+++.+||..+|.+||++.+++++++
T Consensus 233 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 233 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 234678999999999999999999999999999753
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-35 Score=322.17 Aligned_cols=241 Identities=16% Similarity=0.179 Sum_probs=201.3
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCC-eEEEEEEEeC-CCchHHHHHHHHHHHhCCCCC------cceEe
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN-EKVTIFLNDS-ADTYEPALSYVKKLKTLRHPS------ILTFL 123 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g-~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPn------Ilk~~ 123 (852)
...+|++.+.|| .|++|+||+|.++.++ ..|+||++.. ....+.+.+|+.+++.++|++ |+.++
T Consensus 17 ~~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 88 (355)
T 2eu9_A 17 LQERYEIVGNLG--------EGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMS 88 (355)
T ss_dssp ETTTEEEEEEEE--------EETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEE
T ss_pred ecccEEEEEEee--------ccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEee
Confidence 345799999999 9999999999998777 7999999986 234567888999999998766 99999
Q ss_pred eeEEcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE-------
Q psy3914 124 DSVESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI------- 195 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV------- 195 (852)
+++... ..+||||||+. +|.+++... ....+++..+..++.||+.||.||| +.+|+||||||+||++
T Consensus 89 ~~~~~~--~~~~lv~e~~~~~l~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH-~~~ivH~Dlkp~NIll~~~~~~~ 163 (355)
T 2eu9_A 89 DWFNFH--GHMCIAFELLGKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALRFLH-ENQLTHTDLKPENILFVNSEFET 163 (355)
T ss_dssp EEEEET--TEEEEEEECCCCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHH-TTTEECCCCCGGGEEESCCCEEE
T ss_pred eeeeeC--CeEEEEEeccCCChHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEEecccccc
Confidence 999987 89999999999 777777432 2246899999999999999999999 8999999999999999
Q ss_pred ------------ccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCC
Q psy3914 196 ------------NSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGP 263 (852)
Q Consensus 196 ------------~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~ 263 (852)
+.++.+||+|||++..... ......||+.|+|||++.+..++.++|||||||++|+|++|.
T Consensus 164 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 236 (355)
T 2eu9_A 164 LYNEHKSCEEKSVKNTSIRVADFGSATFDHE-------HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGF 236 (355)
T ss_dssp EECCC-CCCEEEESCCCEEECCCTTCEETTS-------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cccccccccccccCCCcEEEeecCccccccc-------cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCC
Confidence 5678999999999874322 112456889999999998888999999999999999999999
Q ss_pred CCCCCCccccC-------cCC------------------------------------------------CChhHHHHHHH
Q psy3914 264 LQSTNRKSLSN-------IDN------------------------------------------------IPENLKRVYLE 288 (852)
Q Consensus 264 ~pf~~~~~l~~-------~~~------------------------------------------------ip~~L~~li~~ 288 (852)
.||.+...... ... .+..+.+++++
T Consensus 237 ~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 316 (355)
T 2eu9_A 237 TLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRR 316 (355)
T ss_dssp CSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHH
Confidence 99965432110 011 13468899999
Q ss_pred hccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 289 LISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 289 lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
||..||.+|||+.++++| +||.+.
T Consensus 317 ~L~~dP~~Rpt~~e~l~h-----p~f~~~ 340 (355)
T 2eu9_A 317 MLEFDPAQRITLAEALLH-----PFFAGL 340 (355)
T ss_dssp HTCSSTTTSCCHHHHTTS-----GGGGGC
T ss_pred HhcCChhhCcCHHHHhcC-----hhhcCC
Confidence 999999999999999997 899764
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-35 Score=318.26 Aligned_cols=243 Identities=12% Similarity=0.168 Sum_probs=182.9
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC---chHHHHHHHH-HHHhCCCCCcceEeeeEEc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD---TYEPALSYVK-KLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~---~~~~~~~E~~-~Lk~LrHPnIlk~~d~~e~ 128 (852)
..+|++.+.|| .|++|.||+|+++.+|+.|+||++.... ....+.+|+. +++.++||||+++++++.+
T Consensus 21 ~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~ 92 (327)
T 3aln_A 21 AEDLKDLGEIG--------RGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR 92 (327)
T ss_dssp SCSEEC-CEEE--------ECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC
T ss_pred HHHhhehheec--------cCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe
Confidence 35699999999 9999999999999999999999998732 2223444554 6778899999999999998
Q ss_pred CCCCeEEEEEeecc-cHHHHHHhhhh-cCCCCCHHHHHHHHHHHHHHHHHHHhcC-CceecccCCCCEEEccCCcEEEcc
Q psy3914 129 PSKSLVYLAVEYVE-PIFYHLDNTLK-ENNEKKQIYISWGIFQITRALSFLINDA-DLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 129 ~~~~~~yIVtE~v~-~L~~~L~~~~~-~~~~l~e~~i~~~l~QI~~aL~fLH~~~-~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
. +..||||||+. +|.+++..... ....+++..+..++.||+.||.||| .. +++||||||+||+++.+|.+||+|
T Consensus 93 ~--~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~~ivH~dlkp~NIll~~~~~~kl~D 169 (327)
T 3aln_A 93 E--GDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK-ENLKIIHRDIKPSNILLDRSGNIKLCD 169 (327)
T ss_dssp S--SEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH-HHHSCCCSCCCGGGEEEETTTEEEECC
T ss_pred C--CceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh-ccCCEeECCCCHHHEEEcCCCCEEEcc
Confidence 7 89999999999 78888753222 2467899999999999999999999 66 999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccc----cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----c----
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENS----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----S---- 273 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~----~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----~---- 273 (852)
||++....... ......||+.|+|||++ .+..++.++|||||||++|+|++|..||.+.... .
T Consensus 170 fg~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 244 (327)
T 3aln_A 170 FGISGQLVDSI-----AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK 244 (327)
T ss_dssp CSSSCC-----------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCC
T ss_pred CCCceeccccc-----ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhc
Confidence 99987543221 11223678899999998 4566889999999999999999999998542211 0
Q ss_pred ---------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 ---------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ---------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++.+||..||.+||++.++++| +||..
T Consensus 245 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h-----p~~~~ 291 (327)
T 3aln_A 245 GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH-----PFILM 291 (327)
T ss_dssp SCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS-----HHHHH
T ss_pred CCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC-----hHHHH
Confidence 013578999999999999999999999999997 66643
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=315.60 Aligned_cols=240 Identities=15% Similarity=0.180 Sum_probs=183.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCc----hHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADT----YEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~----~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|+++.||+|+++.+|+.|+||++..... ...+.++..+++.++||||+++++++.+.
T Consensus 25 ~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~ 96 (318)
T 2dyl_A 25 NDLENLGEMG--------SGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN 96 (318)
T ss_dssp GGEEEEEEC--------------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred ccccccceee--------ecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecC
Confidence 4599999999 99999999999999999999999987322 23344555678888999999999999987
Q ss_pred CCCeEEEEEeeccc-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 130 SKSLVYLAVEYVEP-IFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 130 ~~~~~yIVtE~v~~-L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+|+||||+.. +..++ .. ....+++..+..++.||+.||.|||+.++++||||||+||+++.+|.+||+|||+
T Consensus 97 --~~~~lv~e~~~~~~~~l~-~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 171 (318)
T 2dyl_A 97 --TDVFIAMELMGTCAEKLK-KR--MQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGI 171 (318)
T ss_dssp --SEEEEEECCCSEEHHHHH-HH--HTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTT
T ss_pred --CcEEEEEeccCCcHHHHH-HH--hccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCC
Confidence 899999999984 44443 22 2367899999999999999999999335999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccc-----cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENS-----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS------------ 271 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-----~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~------------ 271 (852)
+....... ......+++.|+|||++ ....++.++|||||||++|+|++|..||.+...
T Consensus 172 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 246 (318)
T 2dyl_A 172 SGRLVDDK-----AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE 246 (318)
T ss_dssp C-------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSC
T ss_pred chhccCCc-----cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccC
Confidence 87543211 11234578899999998 355678899999999999999999999964211
Q ss_pred ---ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 272 ---LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 272 ---l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
......+|+.+.+++.+||..||.+||++.++++| +||++
T Consensus 247 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h-----~~~~~ 289 (318)
T 2dyl_A 247 PPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH-----SFIKR 289 (318)
T ss_dssp CCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS-----HHHHH
T ss_pred CCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC-----HHHHh
Confidence 11124689999999999999999999999999997 66643
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=334.86 Aligned_cols=247 Identities=13% Similarity=0.148 Sum_probs=188.3
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSK 131 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~~ 131 (852)
...|.+.+.|| .|++|+||.+. ..+|+.||||++.. ...+.+.+|+++|+.+ +||||+++++++++.
T Consensus 14 ~~~~~~~~~LG--------~G~~g~V~~~~-~~~g~~vAvK~~~~-~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~-- 81 (434)
T 2rio_A 14 KNLVVSEKILG--------YGSSGTVVFQG-SFQGRPVAVKRMLI-DFCDIALMEIKLLTESDDHPNVIRYYCSETTD-- 81 (434)
T ss_dssp SSCEEEEEEEE--------ECSTTCEEEEE-ESSSSEEEEEEEEG-GGHHHHHHHHHHHHHHTTSTTBCCEEEEEECS--
T ss_pred hheeeccCeEe--------eCCCeEEEEEE-EECCeEEEEEEEcH-HHHHHHHHHHHHHHhccCCCCcCeEEEEEecC--
Confidence 34477889999 89999998654 45799999999986 3456788999999876 899999999999987
Q ss_pred CeEEEEEeecc-cHHHHHHhhhhcCCC---CCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC---------
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLKENNE---KKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC--------- 198 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~~~~~---l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~--------- 198 (852)
..+||||||+. +|.+++......... .++..+..++.||+.||.||| +.+|+||||||+||+++.+
T Consensus 82 ~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDLkp~NILl~~~~~~~~~~~~ 160 (434)
T 2rio_A 82 RFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQT 160 (434)
T ss_dssp SEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEEECCHHHHSCCTT
T ss_pred CeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH-HCCccccCCChHhEEEecCccccccccc
Confidence 89999999999 899998532211111 133345779999999999999 8999999999999999764
Q ss_pred ----CcEEEcccchhhccccccCCCCcccccccCCCcccCCccccC-------CCCCcchhHHhHHHHHHHHHh-CCCCC
Q psy3914 199 ----GEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-------HVTKCSTDMYGLGILIWEVFN-GPLQS 266 (852)
Q Consensus 199 ----g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-------~~~~~~sDIwSLG~ll~el~t-G~~pf 266 (852)
+.+||+|||++..................||+.|+|||++.+ ..++.++|||||||++|||++ |..||
T Consensus 161 ~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf 240 (434)
T 2rio_A 161 GAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240 (434)
T ss_dssp CCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTT
T ss_pred CCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCC
Confidence 479999999988654322211112234578999999999844 668899999999999999999 89999
Q ss_pred CCCccc-----------cCc-----CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 267 TNRKSL-----------SNI-----DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 267 ~~~~~l-----------~~~-----~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.+.... ... ..+++.+.+++.+||..||.+||++.++++| +||.+.
T Consensus 241 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h-----p~f~~~ 302 (434)
T 2rio_A 241 GDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH-----PLFWPK 302 (434)
T ss_dssp CSTTTHHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS-----GGGSCH
T ss_pred CCchhhHHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC-----CccCCc
Confidence 543111 111 1235789999999999999999999999997 899754
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=311.79 Aligned_cols=238 Identities=19% Similarity=0.295 Sum_probs=187.6
Q ss_pred CCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 51 SKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 51 ~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
+...+|++++.|| .|++|+||+|+.. ..|+||++... ...+.+.+|+++|+.++||||++++++.
T Consensus 21 i~~~~y~~~~~lG--------~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 89 (289)
T 3og7_A 21 IPDGQITVGQRIG--------SGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89 (289)
T ss_dssp CCTTSCEEEEEEE--------ECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred cCccceeeeeEec--------CCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec
Confidence 4556799999999 9999999999864 35999999762 2345688999999999999999999965
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
. . ..+|+||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+
T Consensus 90 ~-~--~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~lH-~~~i~H~Dlkp~Nil~~~~~~~kl~ 162 (289)
T 3og7_A 90 T-A--PQLAIVTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLH-AKSIIHRDLKSNNIFLHEDNTVKIG 162 (289)
T ss_dssp C-S--SSCEEEEECCCEEEHHHHHTT---C---CCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEEETTTEEEEC
T ss_pred c-C--CccEEEEEecCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHH-hCCcccccCccceEEECCCCCEEEc
Confidence 4 3 57899999998 79888842 2356899999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCcccc---CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL---SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL--------- 272 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l--------- 272 (852)
|||++........ ........||+.|+|||++. +..++.++|||||||++|+|++|..||.+....
T Consensus 163 Dfg~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 240 (289)
T 3og7_A 163 DFGLATEKSRWSG--SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240 (289)
T ss_dssp CCC--------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHH
T ss_pred cceeccccccccc--cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcc
Confidence 9999875432111 11223456889999999984 666788999999999999999999999653221
Q ss_pred --------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 273 --------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 273 --------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
.....+|+.+.+++.+||+.+|.+||++.++++.++
T Consensus 241 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 284 (289)
T 3og7_A 241 GSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284 (289)
T ss_dssp TSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 112478899999999999999999999999998753
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=310.70 Aligned_cols=238 Identities=17% Similarity=0.206 Sum_probs=196.9
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCC---CeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS---NEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~---g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
...+|++.+.|| .|++|+||+|+...+ +..|+||++... ...+.+.+|+.+++.++||||++++++
T Consensus 10 ~~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 81 (281)
T 3cc6_A 10 AREDVVLNRILG--------EGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI 81 (281)
T ss_dssp CGGGEEEEEEEE--------ECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEE
T ss_pred cccceEEEEEEE--------ecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 345699999999 999999999987543 456999999863 234678899999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+++ ...|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||
T Consensus 82 ~~~---~~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~kl 154 (281)
T 3cc6_A 82 IEE---EPTWIIMELYPYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYLE-SINCVHRDIAVRNILVASPECVKL 154 (281)
T ss_dssp ECS---SSCEEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCSGGGEEEEETTEEEE
T ss_pred EcC---CCCEEEEecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCccceEEECCCCcEEe
Confidence 875 45689999998 799998532 356899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-----------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS----------- 271 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~----------- 271 (852)
+|||++........ .......+++.|+|||++.+..++.++|||||||++|+|++ |..||.....
T Consensus 155 ~Dfg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~ 231 (281)
T 3cc6_A 155 GDFGLSRYIEDEDY---YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD 231 (281)
T ss_dssp CCCCGGGCC------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTC
T ss_pred CccCCCcccccccc---cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCC
Confidence 99999875433211 11223446778999999977788999999999999999998 9999854321
Q ss_pred -ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|+.+.+++.+||..+|.+||++.++++++
T Consensus 232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L 268 (281)
T 3cc6_A 232 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 268 (281)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHH
Confidence 223457889999999999999999999999999875
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-35 Score=337.74 Aligned_cols=239 Identities=14% Similarity=0.210 Sum_probs=205.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
..|++++.|| .|+||.||+|+++.++..|+||++.. ....+.+.+|+.+|++++||||+++++++.+. .
T Consensus 220 ~~~~~~~~lG--------~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~ 289 (495)
T 1opk_A 220 TDITMKHKLG--------GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--P 289 (495)
T ss_dssp GGEEEEEESG--------GGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS--S
T ss_pred HHceeeeEec--------CCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecC--C
Confidence 4589999999 99999999999999999999999987 34567899999999999999999999999987 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
.+||||||+. +|.++|... ....+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++
T Consensus 290 ~~~lv~E~~~~g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH-~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 366 (495)
T 1opk_A 290 PFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE-KKNFIHRNLAARNCLVGENHLVKVADFGLSR 366 (495)
T ss_dssp SCEEEEECCTTCBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECGGGCEEECCTTCEE
T ss_pred cEEEEEEccCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCChhhEEECCCCcEEEeecccce
Confidence 8999999998 799999532 2346889999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDN 277 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~ 277 (852)
...... ........++..|+|||++....++.++|||||||++|||++ |..||.+... ......
T Consensus 367 ~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 443 (495)
T 1opk_A 367 LMTGDT---YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 443 (495)
T ss_dssp CCTTCC---EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTT
T ss_pred eccCCc---eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence 543211 111223445678999999977778999999999999999999 8899865322 223567
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
+|+.+.+++.+||..||.+||++.++++.++
T Consensus 444 ~~~~l~~li~~cl~~dP~~RPs~~el~~~L~ 474 (495)
T 1opk_A 444 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 474 (495)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 8999999999999999999999999999875
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=312.92 Aligned_cols=236 Identities=14% Similarity=0.153 Sum_probs=195.7
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC------CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS------ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~------~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
|..++.|| .|++|+||+|+. ++..|+||++.. ....+.+.+|+++++.++||||+++++++.+.
T Consensus 33 ~~~~~~lg--------~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 102 (307)
T 2nru_A 33 SVGGNKMG--------EGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 102 (307)
T ss_dssp TTTCCEEE--------ECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cccCCccc--------cCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecC
Confidence 66678999 999999999986 688999999875 23456789999999999999999999999987
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+..|+||||+. +|.+++. .......+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||
T Consensus 103 --~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~i~H~dlkp~Nili~~~~~~kl~Dfg 178 (307)
T 2nru_A 103 --DDLCLVYVYMPNGSLLDRLS-CLDGTPPLSWHMRCKIAQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFG 178 (307)
T ss_dssp --SSCEEEEECCTTCBHHHHHH-TGGGCCCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEECTTCCEEECCCT
T ss_pred --CceEEEEEecCCCcHHHHHH-hccCCCCCCHHHHHHHHHHHHHHHHHHh-cCCeecCCCCHHHEEEcCCCcEEEeecc
Confidence 88999999996 7999984 3334467899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC-------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN------------- 274 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~------------- 274 (852)
++........ ........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......
T Consensus 179 ~~~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 255 (307)
T 2nru_A 179 LARASEKFAQ--TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEK 255 (307)
T ss_dssp TCEECCSCSS--CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSC
T ss_pred cccccccccc--cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhh
Confidence 9875432111 111223568899999999854 367899999999999999999999965332211
Q ss_pred ---------c----CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 275 ---------I----DNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 275 ---------~----~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
+ ..++..+.+++.+||+.+|.+||++.+++++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~ 302 (307)
T 2nru_A 256 TIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302 (307)
T ss_dssp CHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred hhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 0 122456889999999999999999999998753
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-35 Score=313.74 Aligned_cols=239 Identities=17% Similarity=0.179 Sum_probs=190.3
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHh--CCCCCcceEeeeEEcC-
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKT--LRHPSILTFLDSVESP- 129 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~--LrHPnIlk~~d~~e~~- 129 (852)
..+|++.+.|| .|++|+||+|+. +|+.|+||++... ......+|.+++.. ++||||+++++++...
T Consensus 7 ~~~y~~~~~lg--------~G~~g~V~~~~~--~~~~vavK~~~~~-~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~ 75 (301)
T 3q4u_A 7 ARDITLLECVG--------KGRYGEVWRGSW--QGENVAVKIFSSR-DEKSWFRETELYNTVMLRHENILGFIASDMTSR 75 (301)
T ss_dssp GGGCEEEEEEE--------ECSSEEEEEEEE--TTEEEEEEEECGG-GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE
T ss_pred cCcEEEEEeec--------cCCCcEEEEEEE--CCEEEEEEEeccc-cchhhHHHHHHHHHhhccCcCeeeEEEeecccc
Confidence 44699999999 999999999988 7999999999863 34455566666666 8999999999986542
Q ss_pred -CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-------cCCceecccCCCCEEEccCC
Q psy3914 130 -SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLIN-------DADLRHNHVNHTSIFINSCG 199 (852)
Q Consensus 130 -~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~-------~~~ivH~DIkp~NIlV~~~g 199 (852)
....+|+||||+. +|.+++. ...+++..+..++.||+.||.|||. +.+++||||||+||+++.++
T Consensus 76 ~~~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~ 150 (301)
T 3q4u_A 76 HSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG 150 (301)
T ss_dssp TTEEEEEEEECCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTS
T ss_pred CCCceeEEehhhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCC
Confidence 2256999999998 7999983 2578999999999999999999994 67999999999999999999
Q ss_pred cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCC------CCCcchhHHhHHHHHHHHHhC----------C
Q psy3914 200 EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSH------VTKCSTDMYGLGILIWEVFNG----------P 263 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~------~~~~~sDIwSLG~ll~el~tG----------~ 263 (852)
.+||+|||++..................||+.|+|||++.+. .++.++|||||||++|||++| .
T Consensus 151 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~ 230 (301)
T 3q4u_A 151 QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230 (301)
T ss_dssp CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccc
Confidence 999999999875433222111122345789999999998554 344689999999999999999 7
Q ss_pred CCCCCCccc--------------cCcCC---------CChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 264 LQSTNRKSL--------------SNIDN---------IPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 264 ~pf~~~~~l--------------~~~~~---------ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.||.+.... ..... +++.+.+++.+||+.||.+|||+.++++.+
T Consensus 231 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L 297 (301)
T 3q4u_A 231 PPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297 (301)
T ss_dssp CTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHH
T ss_pred ccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHH
Confidence 787432111 01112 346799999999999999999999999875
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-35 Score=328.25 Aligned_cols=240 Identities=17% Similarity=0.212 Sum_probs=190.6
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEc---CCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK---GSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k---~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
...|++.+.|| .|++|.||+|+.+ .++..|+||++... .....+.+|+.+|++++||||+++++++
T Consensus 44 ~~~~~~~~~lG--------~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 115 (373)
T 2qol_A 44 ATNISIDKVVG--------AGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV 115 (373)
T ss_dssp GGGCCCCEEEE--------ECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred HhhceeeeEEe--------eCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 34699999999 9999999999987 45778999999862 2345688999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
.+. ..+||||||+. +|.+++.+ ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+
T Consensus 116 ~~~--~~~~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~kl~ 189 (373)
T 2qol_A 116 TKS--KPVMIVTEYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASGMKYLS-DMGYVHRDLAARNILINSNLVCKVS 189 (373)
T ss_dssp CSS--SSCEEEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred eeC--CceEEEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeCCCCCcceEEEcCCCCEEEC
Confidence 987 88999999997 79999853 2356899999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------ 271 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------ 271 (852)
|||+++.......... ......++..|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 190 Dfg~a~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~ 268 (373)
T 2qol_A 190 DFGLGRVLEDDPEAAY-TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR 268 (373)
T ss_dssp CC-----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEE
T ss_pred cCccccccccCCccce-eccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence 9999876543221111 1112234668999999977788999999999999999998 9999954321
Q ss_pred ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|..+.+++.+||..+|.+||++.++++.+
T Consensus 269 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L 304 (373)
T 2qol_A 269 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304 (373)
T ss_dssp CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHH
Confidence 223457889999999999999999999999998864
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-35 Score=319.32 Aligned_cols=242 Identities=15% Similarity=0.145 Sum_probs=199.4
Q ss_pred CCCCCe-eEeccccCCCCCCcccCCceEEEEEEE----cCCCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceE
Q psy3914 51 SKDFAY-EVGEPAVSFSGCFTQKHTFWKFHGGKK----KGSNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTF 122 (852)
Q Consensus 51 ~~~~~Y-~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~----k~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~ 122 (852)
.+..+| ++++.|| .|++|+||.+.. ..+|+.|+||++.... ....+.+|+++|+.++||||+++
T Consensus 27 ~~~~r~~~~~~~lG--------~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 98 (318)
T 3lxp_A 27 VFHKRYLKKIRDLG--------EGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98 (318)
T ss_dssp BCCGGGEEEEEEEE--------ECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred eecHHHHhhhheec--------CCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhE
Confidence 345556 9999999 999999987754 4578999999998732 34568899999999999999999
Q ss_pred eeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc
Q psy3914 123 LDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE 200 (852)
Q Consensus 123 ~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~ 200 (852)
++++.+.....+|+||||+. +|.+++.. ..+++..+..++.||+.||.||| +.+++||||||+||+++.+|.
T Consensus 99 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH-~~~ivH~Dikp~Nil~~~~~~ 172 (318)
T 3lxp_A 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLH-AQHYIHRDLAARNVLLDNDRL 172 (318)
T ss_dssp EEEEEETTTTEEEEEECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTCC
T ss_pred EEEEecCCCceEEEEEecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHH-hCCccCCCCchheEEEcCCCC
Confidence 99998854478999999997 79988842 35899999999999999999999 899999999999999999999
Q ss_pred EEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc----------
Q psy3914 201 WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK---------- 270 (852)
Q Consensus 201 ~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~---------- 270 (852)
+||+|||++........ .........++..|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus 173 ~kl~Dfg~a~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~ 251 (318)
T 3lxp_A 173 VKIGDFGLAKAVPEGHE-YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA 251 (318)
T ss_dssp EEECCGGGCEECCTTCS-EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSC
T ss_pred EEECCcccccccccccc-ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhccc
Confidence 99999999875533211 1112223457778999999977778889999999999999999999884321
Q ss_pred -----------------cccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 271 -----------------SLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 271 -----------------~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.......+|+.+.+++++||..||.+||++.++++.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 305 (318)
T 3lxp_A 252 QGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPIL 305 (318)
T ss_dssp CHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 1123457899999999999999999999999999864
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=307.55 Aligned_cols=232 Identities=13% Similarity=0.189 Sum_probs=195.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|++|+||+|++. +..|+||++... .....+.+|+.+++.++||||+++++++.+.
T Consensus 10 ~~y~~~~~lg--------~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 79 (271)
T 3kmu_A 10 KQLNFLTKLN--------ENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP 79 (271)
T ss_dssp GGCEEEEEEE--------EETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT
T ss_pred HHhHHHHHhc--------CCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC
Confidence 4599999999 9999999999984 889999999872 2345688999999999999999999999875
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC--ceecccCCCCEEEccCCcEEEcc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDAD--LRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~--ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
....+|+||||+. +|.+++... ....+++..+..++.||+.||.||| +.+ ++||||||+||+++.+|.++|+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH-~~~~~i~H~dikp~Nil~~~~~~~~l~~ 156 (271)
T 3kmu_A 80 PAPHPTLITHWMPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISM 156 (271)
T ss_dssp TSSSCEEEEECCTTCBHHHHHHSC--SSCCCCHHHHHHHHHHHHHHHHHHT-TSSSCCTTCCCSGGGEEECTTSCEEEEG
T ss_pred CCCCeEeeecccCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHh-cCCCceecCCCccceEEEcCCcceeEEe
Confidence 4578999999997 899999531 2235899999999999999999999 888 99999999999999999999998
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCc---chhHHhHHHHHHHHHhCCCCCCCCcc-----------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKC---STDMYGLGILIWEVFNGPLQSTNRKS----------- 271 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~---~sDIwSLG~ll~el~tG~~pf~~~~~----------- 271 (852)
||+..... .....+|+.|+|||++.+..+.. ++|||||||++|+|++|..||.+...
T Consensus 157 ~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 227 (271)
T 3kmu_A 157 ADVKFSFQ---------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEG 227 (271)
T ss_dssp GGSCCTTS---------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSC
T ss_pred ccceeeec---------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcC
Confidence 88865321 12345788999999985544433 79999999999999999999964321
Q ss_pred --ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 --LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 --l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|+.+.+++.+||+.||.+|||+.++++.+
T Consensus 228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L 265 (271)
T 3kmu_A 228 LRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPIL 265 (271)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 223467899999999999999999999999999874
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-34 Score=327.90 Aligned_cols=235 Identities=15% Similarity=0.211 Sum_probs=200.1
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
....|++.+.|| .|+||.||+|..+ |+.|+||+++.....+.+.+|+++|++++||||+++++++... .
T Consensus 191 ~~~~~~~~~~lG--------~G~fg~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~ 259 (450)
T 1k9a_A 191 NMKELKLLQTIG--------KGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE-K 259 (450)
T ss_dssp CGGGEEEEEEEE--------ECSSEEEEEEEET--TEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECT-T
T ss_pred ChHHeEEEeeec--------CcCCeeEEEEEec--CCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcC-C
Confidence 334699999999 9999999999884 7899999998866778899999999999999999999998764 2
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+||||||+. +|.++|.+. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++
T Consensus 260 ~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivHrDlkp~Nill~~~~~~kl~DfG~a 336 (450)
T 1k9a_A 260 GGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLE-GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336 (450)
T ss_dssp SCEEEEEECCTTCBHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCCCHhhEEECCCCCEEEeeCCCc
Confidence 47999999997 799999543 2234789999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcC
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNID 276 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~ 276 (852)
+..... .....++..|+|||++.+..++.++|||||||++|||++ |..||.+... ...+.
T Consensus 337 ~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~ 409 (450)
T 1k9a_A 337 KEASST-------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD 409 (450)
T ss_dssp EECC-------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCT
T ss_pred cccccc-------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence 743211 112245678999999988889999999999999999998 9999964322 23356
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.+|+.+.+++.+||..||.+|||+.++++.+
T Consensus 410 ~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L 440 (450)
T 1k9a_A 410 GCPPAVYDVMKNCWHLDAATRPTFLQLREQL 440 (450)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 7899999999999999999999999998864
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=308.07 Aligned_cols=235 Identities=15% Similarity=0.202 Sum_probs=193.3
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
...+|++.+.|| .|++++||.|+. +|+.|+||++......+.+.+|+++++.++||||+++++++.+. .
T Consensus 19 ~~~~y~~~~~lg--------~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~ 87 (278)
T 1byg_A 19 NMKELKLLQTIG--------KGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE-K 87 (278)
T ss_dssp CGGGEEEEEEEE--------ECSSCEEEEEEE--TTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--
T ss_pred ChhhceEEeEEe--------cCCCceEEEEEE--cCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-C
Confidence 345699999999 999999999988 48899999998866778899999999999999999999987543 2
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+.+|+||||+. +|.+++.... ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 164 (278)
T 1byg_A 88 GGLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE-GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164 (278)
T ss_dssp -CCEEEECCCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred CceEEEEecCCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHH-hCCccccCCCcceEEEeCCCcEEEeecccc
Confidence 57999999997 7999985432 123788899999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcC
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNID 276 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~ 276 (852)
...... .....+++.|+|||++.+..++.++|||||||++|+|++ |..||.+... .....
T Consensus 165 ~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 237 (278)
T 1byg_A 165 KEASST-------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD 237 (278)
T ss_dssp ------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCT
T ss_pred cccccc-------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcc
Confidence 743321 112345778999999977788999999999999999998 9999854321 22346
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.+|+.+.+++.+||+.||.+||++.++++.+
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L 268 (278)
T 1byg_A 238 GCPPAVYEVMKNCWHLDAAMRPSFLQLREQL 268 (278)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cCCHHHHHHHHHHhcCChhhCCCHHHHHHHH
Confidence 7899999999999999999999999999864
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-35 Score=326.53 Aligned_cols=241 Identities=18% Similarity=0.229 Sum_probs=199.7
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-CchHHHHHHHHHHHhCC-CC-----CcceEeee
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-DTYEPALSYVKKLKTLR-HP-----SILTFLDS 125 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-~~~~~~~~E~~~Lk~Lr-HP-----nIlk~~d~ 125 (852)
..+|++.+.|| .|++|+||+|+++.+++.||||++... .....+.+|+++++.++ |+ +|++++++
T Consensus 53 ~~~y~~~~~lG--------~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~ 124 (382)
T 2vx3_A 53 MDRYEIDSLIG--------KGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRH 124 (382)
T ss_dssp TTTEEEEEEEE--------EETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEE
T ss_pred eeeEEEEEEEe--------ecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeee
Confidence 45799999999 999999999999999999999999862 23456778888888885 55 49999999
Q ss_pred EEcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceecccCCCCEEEcc--CCcE
Q psy3914 126 VESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLIN-DADLRHNHVNHTSIFINS--CGEW 201 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~-~~~ivH~DIkp~NIlV~~--~g~~ 201 (852)
+... +.+||||||+. +|.+++... ....+++..+..++.||+.||.|||. ..+|+||||||+||+++. ++.+
T Consensus 125 ~~~~--~~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~ 200 (382)
T 2vx3_A 125 FMFR--NHLCLVFEMLSYNLYDLLRNT--NFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAI 200 (382)
T ss_dssp EEET--TEEEEEEECCCCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCE
T ss_pred eccC--CceEEEEecCCCCHHHHHhhc--CcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcE
Confidence 9987 89999999999 899988532 22458999999999999999999994 478999999999999954 7889
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC-------
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN------- 274 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~------- 274 (852)
||+|||+++..... .....+|+.|+|||++.+..++.++|||||||++|||++|..||.+......
T Consensus 201 kL~DFG~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~ 273 (382)
T 2vx3_A 201 KIVDFGSSCQLGQR-------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEV 273 (382)
T ss_dssp EECCCTTCEETTCC-------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred EEEeccCceecccc-------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 99999998754321 2245688899999999888899999999999999999999999965422110
Q ss_pred ------------------cCCCC--------------------------------------------------hhHHHHH
Q psy3914 275 ------------------IDNIP--------------------------------------------------ENLKRVY 286 (852)
Q Consensus 275 ------------------~~~ip--------------------------------------------------~~L~~li 286 (852)
+..+| +.+.++|
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli 353 (382)
T 2vx3_A 274 LGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLI 353 (382)
T ss_dssp HCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHH
T ss_pred hCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHH
Confidence 00000 3688999
Q ss_pred HHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 287 LELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 287 ~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
++||..||.+|||+.++|+| +||+..
T Consensus 354 ~~mL~~dP~~Rpta~e~L~h-----p~f~~~ 379 (382)
T 2vx3_A 354 LRMLDYDPKTRIQPYYALQH-----SFFKKT 379 (382)
T ss_dssp HHHTCSCTTTSCCHHHHTTS-----GGGCC-
T ss_pred HHhcCCChhhCCCHHHHhcC-----cccccC
Confidence 99999999999999999998 899753
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-34 Score=306.41 Aligned_cols=237 Identities=17% Similarity=0.210 Sum_probs=199.7
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
...|++.+.|| .|++|.||.|+.. ++..|+||++.. ....+.+.+|+++++.++||||+++++++..
T Consensus 12 ~~~y~~~~~lg--------~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--- 79 (279)
T 1qpc_A 12 RETLKLVERLG--------AGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--- 79 (279)
T ss_dssp GGGEEEEEEEE--------EETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred HHhhhheeeec--------CCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC---
Confidence 34699999999 9999999999975 677899999987 3456788999999999999999999999864
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+..|+||||+. +|.+++.... ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||++
T Consensus 80 ~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 156 (279)
T 1qpc_A 80 EPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIE-ERNYIHRDLRAANILVSDTLSCKIADFGLA 156 (279)
T ss_dssp SSCEEEEECCTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCcEEEEecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCCHhhEEEcCCCCEEECCCccc
Confidence 46899999996 7999884321 136889999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcC
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNID 276 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~ 276 (852)
....... ........++..|+|||++.+..++.++|||||||++|+|++ |..||.+... .....
T Consensus 157 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 233 (279)
T 1qpc_A 157 RLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233 (279)
T ss_dssp EECSSSC---EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCT
T ss_pred ccccCcc---cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcc
Confidence 7543321 111223445778999999977778899999999999999999 8999865322 12346
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.+|+.+.+++.+||..+|.+||++.++++.+
T Consensus 234 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l 264 (279)
T 1qpc_A 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264 (279)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cccHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence 7899999999999999999999999998864
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=317.49 Aligned_cols=241 Identities=15% Similarity=0.196 Sum_probs=180.0
Q ss_pred CCCeeEec-cccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcC--
Q psy3914 53 DFAYEVGE-PAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESP-- 129 (852)
Q Consensus 53 ~~~Y~i~e-~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~-- 129 (852)
..+|.+.+ .|| .|++|+||.|+++.+|+.|+||++... ..........++.++||||++++++++..
T Consensus 27 ~~~y~i~~~~lG--------~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 96 (336)
T 3fhr_A 27 TDDYQLSKQVLG--------LGVNGKVLECFHRRTGQKCALKLLYDS--PKARQEVDHHWQASGGPHIVCILDVYENMHH 96 (336)
T ss_dssp GGTEEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEESS--HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred cceeEecceeee--------eCCCeEEEEEEECCCCCEEEEEEecCc--HHHHHHHHHHHHhcCCCChHHHHHHHhhccC
Confidence 34699955 589 999999999999999999999999762 22333344456778999999999998762
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC---CcEEEc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC---GEWKLG 204 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~---g~~KL~ 204 (852)
.+..+||||||+. +|.+++... ....+++..+..++.||+.||.||| +.+++||||||+||+++.+ +.+||+
T Consensus 97 ~~~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~ql~~~l~~LH-~~~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 97 GKRCLLIIMECMEGGELFSRIQER--GDQAFTEREAAEIMRDIGTAIQFLH-SHNIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp TEEEEEEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred CCceEEEEEeccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEEEecCCCceEEEe
Confidence 1266999999997 799998532 2246999999999999999999999 8999999999999999864 459999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------ 272 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------ 272 (852)
|||++...... ......+|+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 174 Dfg~~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 247 (336)
T 3fhr_A 174 DFGFAKETTQN------ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL 247 (336)
T ss_dssp CCTTCEEC----------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------
T ss_pred ccccceecccc------ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhc
Confidence 99998744321 122356788999999997778889999999999999999999999543211
Q ss_pred -------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 -------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 -------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....+++.+.+++++||..||.+|||+.++++| +||++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h-----p~~~~~ 294 (336)
T 3fhr_A 248 GQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH-----PWINQS 294 (336)
T ss_dssp ---CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS-----HHHHTG
T ss_pred cccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC-----cccccc
Confidence 1124689999999999999999999999999998 788653
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=314.89 Aligned_cols=242 Identities=13% Similarity=0.124 Sum_probs=196.7
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCC--CCCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLR--HPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~Lr--HPnIlk~~d~ 125 (852)
....|++.+.|| .|++|.||+|.+. +++.|+||++... .....+.+|+++++.++ ||||++++++
T Consensus 26 ~~~~y~~~~~lg--------~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~ 96 (313)
T 3cek_A 26 KGRIYSILKQIG--------SGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 96 (313)
T ss_dssp TTEEEEEEEEEE--------CCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred ccceEEEEEEec--------CCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence 455699999999 9999999999986 5889999999762 23467889999999998 5999999999
Q ss_pred EEcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 126 VESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
+.+. ..+|+|||+.. +|.+++.. ...+++..+..++.||+.||.||| +.+++||||||+||+++ +|.+||+
T Consensus 97 ~~~~--~~~~lv~e~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~dlkp~NIl~~-~~~~kL~ 168 (313)
T 3cek_A 97 EITD--QYIYMVMECGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIH-QHGIVHSDLKPANFLIV-DGMLKLI 168 (313)
T ss_dssp EECS--SEEEEEECCCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEEE-TTEEEEC
T ss_pred eecC--CEEEEEEecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCceecCCCcccEEEE-CCeEEEe
Confidence 9987 89999999776 89999843 357899999999999999999999 89999999999999996 5899999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccC-----------CCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-----------HVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-- 271 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-----------~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-- 271 (852)
|||++........ ........|++.|+|||++.+ ..++.++|||||||++|+|++|..||.+...
T Consensus 169 Dfg~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (313)
T 3cek_A 169 DFGIANQMQPDTT--SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246 (313)
T ss_dssp CCSSSCC----------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH
T ss_pred eccccccccCccc--cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH
Confidence 9999875433211 111224568899999999854 4678899999999999999999999954311
Q ss_pred ------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 272 ------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 272 ------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.......+..+.+++.+||..||.+||++.++++| +||+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h-----~~~~~~ 299 (313)
T 3cek_A 247 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH-----PYVQIQ 299 (313)
T ss_dssp HHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS-----HHHHCC
T ss_pred HHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC-----ccccCC
Confidence 12234568899999999999999999999999997 777543
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=325.10 Aligned_cols=243 Identities=13% Similarity=0.201 Sum_probs=190.1
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCC---eEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN---EKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g---~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
....|++++.|| .|+||+||+|+...++ ..|+||++.. ......+.+|+.+++.++||||++++++
T Consensus 87 ~~~~~~~~~~LG--------~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~ 158 (373)
T 3c1x_A 87 SSLIVHFNEVIG--------RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 158 (373)
T ss_dssp TTEEEEEEEEEE--------CCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEE
T ss_pred hhceeecCcEee--------eCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 345689999999 9999999999876443 4689998876 2345678899999999999999999998
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+... .+..|+||||+. +|.+++.. ....++...+..++.||+.||.||| +.+++||||||+||+++.+|.+||
T Consensus 159 ~~~~-~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~~~~kL 233 (373)
T 3c1x_A 159 CLRS-EGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLA-SKKFVHRDLAARNCMLDEKFTVKV 233 (373)
T ss_dssp ECCC-SSCCEEEEECCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTCCEEE
T ss_pred EEcC-CCCeEEEEECCCCCCHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHH-HCCEecCccchheEEECCCCCEEE
Confidence 6542 267899999998 79999843 2356889999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCccc----------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKSL---------- 272 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~l---------- 272 (852)
+|||+++.................+++.|+|||++.+..++.++|||||||++|||++ |.+||.+....
T Consensus 234 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~ 313 (373)
T 3c1x_A 234 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 313 (373)
T ss_dssp CCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTC
T ss_pred eeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCC
Confidence 9999997553322111112223456778999999977888999999999999999999 67777543221
Q ss_pred --cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 273 --SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 273 --~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.....+|+.+.+++.+||..+|.+||++.++++++
T Consensus 314 ~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L 350 (373)
T 3c1x_A 314 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 350 (373)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 23457899999999999999999999999999875
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=317.84 Aligned_cols=240 Identities=12% Similarity=0.099 Sum_probs=198.5
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCC--------CeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcce---
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS--------NEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILT--- 121 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~--------g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk--- 121 (852)
..+|++++.|| .|++|.||+|+++.+ ++.|+||++... ..+.+|+++++.++||||++
T Consensus 41 ~~~y~~~~~lg--------~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---~~~~~E~~~l~~l~h~niv~~~~ 109 (352)
T 2jii_A 41 GRQWKLKSFQT--------RDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---GRLFNEQNFFQRAAKPLQVNKWK 109 (352)
T ss_dssp SCEEEEEEEEE--------EETTEEEEEEEECC-----------CEEEEEEETT---STHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCeEEEEEEec--------CCCCeEEEEEeecCCccccccccCceEEEEEeccc---chHHHHHHHHHHhcccchhhhhh
Confidence 45799999999 999999999999884 889999999864 35789999999999999988
Q ss_pred ------------EeeeEEcCCCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceeccc
Q psy3914 122 ------------FLDSVESPSKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHV 188 (852)
Q Consensus 122 ------------~~d~~e~~~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DI 188 (852)
+++++.. ....+||||||+. +|.+++... ....+++..+..++.||+.||.||| +.+++||||
T Consensus 110 ~~~~~~~~~i~~~~~~~~~-~~~~~~lv~e~~~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH-~~~ivH~Di 185 (352)
T 2jii_A 110 KLYSTPLLAIPTCMGFGVH-QDKYRFLVLPSLGRSLQSALDVS--PKHVLSERSVLQVACRLLDALEFLH-ENEYVHGNV 185 (352)
T ss_dssp HHTTCTTCSCCCCCEEEEE-TTTEEEEEEECCCEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHH-HTTCBCSCC
T ss_pred hhccCCccCccchhhcccc-CCcEEEEEecCCCcCHHHHHHhC--CcCCCCHHHHHHHHHHHHHHHHHHH-hCCccCCCC
Confidence 5666665 1278999999998 899999532 1357999999999999999999999 899999999
Q ss_pred CCCCEEEccCC--cEEEcccchhhccccccCCC---CcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCC
Q psy3914 189 NHTSIFINSCG--EWKLGGLEYMEKISEASCIP---MKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGP 263 (852)
Q Consensus 189 kp~NIlV~~~g--~~KL~DFg~a~~~~~~~~~~---~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~ 263 (852)
||+||+++.++ .+||+|||++..+....... ........||+.|+|||++.+..++.++|||||||++|+|++|.
T Consensus 186 kp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 265 (352)
T 2jii_A 186 TAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGF 265 (352)
T ss_dssp CGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999998 89999999997654322111 11223457899999999998888999999999999999999999
Q ss_pred CCCCCCc-cc--------------c-------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 264 LQSTNRK-SL--------------S-------NIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 264 ~pf~~~~-~l--------------~-------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.||.+.. .. . ....+|+.+.+++.+||..||.+||++.++++.+
T Consensus 266 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 331 (352)
T 2jii_A 266 LPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNL 331 (352)
T ss_dssp CTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred CCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHH
Confidence 9996432 10 0 0125799999999999999999999999998864
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-34 Score=328.46 Aligned_cols=238 Identities=15% Similarity=0.216 Sum_probs=201.2
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
...|++.+.|| .|+||.||+|+.+ ++..|+||++.. ....+.+.+|+++|+.|+||||+++++++. .
T Consensus 187 ~~~~~~~~~lG--------~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~-- 254 (454)
T 1qcf_A 187 RESLKLEKKLG--------AGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-K-- 254 (454)
T ss_dssp GGGEEEEEEEE--------CCSSEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-S--
T ss_pred hHHeEEEEEcc--------cCCceEEEEEEEC-CccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-C--
Confidence 34599999999 9999999999986 578899999987 345678999999999999999999999986 3
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+||||||+. +|.++|.... ...++...+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||++
T Consensus 255 ~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivHrDlkp~Nill~~~~~~kl~DFG~a 331 (454)
T 1qcf_A 255 EPIYIITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIE-QRNYIHRDLRAANILVSASLVCKIADFGLA 331 (454)
T ss_dssp SSCEEEECCCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSSCSGGGEEECTTCCEEECSTTGG
T ss_pred CccEEEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHH-hCCccCCCCCHHHEEECCCCcEEEeeCCCc
Confidence 67999999997 7999995322 135788899999999999999999 899999999999999999999999999999
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcC
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNID 276 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~ 276 (852)
+....... .......++..|+|||++....++.++|||||||++|||++ |..||.+... .....
T Consensus 332 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~ 408 (454)
T 1qcf_A 332 RVIEDNEY---TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPE 408 (454)
T ss_dssp GGBCCHHH---HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCT
T ss_pred eEcCCCce---eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence 85533211 11122345678999999977778999999999999999999 9999965422 22356
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
.+|+.+.+++.+||..||.+|||+.++++.+.
T Consensus 409 ~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~ 440 (454)
T 1qcf_A 409 NCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 440 (454)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 78999999999999999999999999998764
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=309.95 Aligned_cols=238 Identities=16% Similarity=0.198 Sum_probs=186.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHh--CCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKT--LRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~--LrHPnIlk~~d~~e~~~~ 131 (852)
.+|++.+.|| .|++|.||+|+++ |+.|+||++... ......+|..++.. ++||||+++++++.....
T Consensus 37 ~~y~~~~~lg--------~G~~g~V~~~~~~--~~~vavK~~~~~-~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 37 KQIQMVKQIG--------KGRYGEVWMGKWR--GEKVAVKVFFTT-EEASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp HHCEEEEEEE--------EETTEEEEEEEET--TEEEEEEEEEGG-GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred cceEEEeEee--------cCCCeEEEEEEEC--CceEEEEEEecc-ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 4699999999 9999999999884 899999999763 23344555555554 489999999999886522
Q ss_pred --CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--------CceecccCCCCEEEccCC
Q psy3914 132 --SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDA--------DLRHNHVNHTSIFINSCG 199 (852)
Q Consensus 132 --~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~--------~ivH~DIkp~NIlV~~~g 199 (852)
..+|+||||+. +|.+++.. ..+++..+..++.||+.||.||| .. +++||||||+||+++.+|
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH-~~~~~~~~~~~ivH~Dikp~Nill~~~~ 179 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLH-TEIFSTQGKPAIAHRDLKSKNILVKKNG 179 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHH-SCBCSTTCBCCEECSCCCGGGEEECTTS
T ss_pred CCCceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHH-HhhhhhccCCCEEecccchHHEEECCCC
Confidence 57999999997 79999843 46899999999999999999999 77 999999999999999999
Q ss_pred cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcc------hhHHhHHHHHHHHHhC----------C
Q psy3914 200 EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCS------TDMYGLGILIWEVFNG----------P 263 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~------sDIwSLG~ll~el~tG----------~ 263 (852)
.+||+|||++..+...............||+.|+|||++.+..+... +|||||||++|||++| .
T Consensus 180 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~ 259 (337)
T 3mdy_A 180 TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ 259 (337)
T ss_dssp CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccc
Confidence 99999999987554322221112224578999999999866555554 9999999999999999 5
Q ss_pred CCCCCCcccc--------------C---------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 264 LQSTNRKSLS--------------N---------IDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 264 ~pf~~~~~l~--------------~---------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
.||....... . ...+++.+.+++.+||..||.+||++.+++++++
T Consensus 260 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 327 (337)
T 3mdy_A 260 LPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327 (337)
T ss_dssp CTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred ccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHH
Confidence 6663321100 0 1134566999999999999999999999999853
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=314.59 Aligned_cols=242 Identities=17% Similarity=0.231 Sum_probs=198.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEE----EcCCCeEEEEEEEeCC--CchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGK----KKGSNEKVTIFLNDSA--DTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~----~k~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
...|++++.|| .|++|.||.|+ +..+|+.|+||++... .....+.+|+++++.++||||+++++++
T Consensus 40 ~~~y~~~~~lg--------~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 111 (326)
T 2w1i_A 40 ERHLKFLQQLG--------KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 111 (326)
T ss_dssp GGGEEEEEEEE--------CCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred HHHceeeeeec--------cCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence 34599999999 99999999998 4668999999999872 3345788999999999999999999998
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
.......+|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+
T Consensus 112 ~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~dikp~NIli~~~~~~kL~ 187 (326)
T 2w1i_A 112 YSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKIG 187 (326)
T ss_dssp CC----CCEEEECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEEEETTEEEEC
T ss_pred EecCCCceEEEEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHH-hCCEeccCCCcceEEEcCCCcEEEe
Confidence 7653357899999997 899998532 246899999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCC---------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNR--------------- 269 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~--------------- 269 (852)
|||++......... ........++..|+|||++.+..++.++|||||||++|+|++|..|+...
T Consensus 188 Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~ 266 (326)
T 2w1i_A 188 DFGLTKVLPQDKEY-YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 266 (326)
T ss_dssp CCTTCEECCSSCSE-EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTH
T ss_pred cCcchhhccccccc-cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchh
Confidence 99998755332111 11112344667899999997777889999999999999999998877421
Q ss_pred -------------ccccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 270 -------------KSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 270 -------------~~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
........+|+.+.+++.+||..||.+||++.++++.+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L 317 (326)
T 2w1i_A 267 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 317 (326)
T ss_dssp HHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred hhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 01123457889999999999999999999999999864
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=314.12 Aligned_cols=240 Identities=8% Similarity=0.010 Sum_probs=195.1
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEE-----EEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCC---CCCcceEe
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGG-----KKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLR---HPSILTFL 123 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a-----~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~Lr---HPnIlk~~ 123 (852)
....|.+.+.|| .|+||+||+| .+..+++.|+||++.. .....+.+|++.++.++ ||||++++
T Consensus 63 ~~~~y~~~~~lG--------~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~e~~~~~~l~~~~~~~iv~~~ 133 (365)
T 3e7e_A 63 GSKLVYVHHLLG--------EGAFAQVYEATQGDLNDAKNKQKFVLKVQKP-ANPWEFYIGTQLMERLKPSMQHMFMKFY 133 (365)
T ss_dssp SSSEEEEEEEEE--------ECSSEEEEEEEC-------CCCCEEEEEESS-CCHHHHHHHHHHHHHSCGGGGGGBCCEE
T ss_pred CCEEEEEEEEee--------ccCCEEEEEEEecCCcccccCcEEEEEEeCC-CChhHHHHHHHHHHHhhhhhhhhhhhhh
Confidence 345699999999 9999999999 4677899999999986 44567888888888887 99999999
Q ss_pred eeEEcCCCCeEEEEEeecc--cHHHHHHhhhh-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc---
Q psy3914 124 DSVESPSKSLVYLAVEYVE--PIFYHLDNTLK-ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS--- 197 (852)
Q Consensus 124 d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~-~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~--- 197 (852)
+++... +..||||||+. +|.+++..... ....+++..+..++.||+.||.||| +.+|+||||||+||+++.
T Consensus 134 ~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH-~~~ivHrDiKp~NIll~~~~~ 210 (365)
T 3e7e_A 134 SAHLFQ--NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH-DCEIIHGDIKPDNFILGNGFL 210 (365)
T ss_dssp EEEECS--SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH-TTTEECCCCSGGGEEECGGGT
T ss_pred eeeecC--CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh-hCCeecCCCCHHHEEeccccc
Confidence 999987 88999999998 79999964332 3467999999999999999999999 899999999999999998
Q ss_pred --------CCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCC
Q psy3914 198 --------CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNR 269 (852)
Q Consensus 198 --------~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~ 269 (852)
++.+||+|||++..+... ..........||+.|+|||++.+..++.++|||||||++|||++|..||...
T Consensus 211 ~~~~~~~~~~~~kl~DFG~a~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 288 (365)
T 3e7e_A 211 EQDDEDDLSAGLALIDLGQSIDMKLF--PKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN 288 (365)
T ss_dssp CC------CTTEEECCCTTCEEGGGS--CTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEE
T ss_pred CccccccccCCEEEeeCchhhhhhcc--CCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccC
Confidence 899999999999644321 1122233567899999999998888999999999999999999999998432
Q ss_pred ccc-----cCc--CCCChhHHHHHHHhccCCCCCCCC-HHHHHH
Q psy3914 270 KSL-----SNI--DNIPENLKRVYLELISERPNQRPN-PADFIM 305 (852)
Q Consensus 270 ~~l-----~~~--~~ip~~L~~li~~lL~~nP~~Rps-~~elL~ 305 (852)
... ..+ ...++.+.+++..||+.+|..|++ +.++.+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~ 332 (365)
T 3e7e_A 289 EGGECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQ 332 (365)
T ss_dssp ETTEEEECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHH
T ss_pred CCCceeechhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHH
Confidence 111 111 134667999999999999999965 444444
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=326.69 Aligned_cols=241 Identities=13% Similarity=0.123 Sum_probs=203.1
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCC-cceEeeeEEcCC
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPS-ILTFLDSVESPS 130 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPn-Ilk~~d~~e~~~ 130 (852)
...+|++++.|| .|+||.||+|+++.+++.|+||++........+.+|+++++.|+|++ |..+..++...
T Consensus 5 i~~~y~i~~~LG--------~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~- 75 (483)
T 3sv0_A 5 VGNKFRLGRKIG--------SGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEG- 75 (483)
T ss_dssp ETTTEECCCCCE--------ECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEET-
T ss_pred cCCcEEEEEEEe--------eCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeC-
Confidence 345799999999 99999999999999999999999987555556889999999999754 55555555555
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEE---ccCCcEEEccc
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI---NSCGEWKLGGL 206 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV---~~~g~~KL~DF 206 (852)
...||||||+. +|.+++... ...+++..+..++.||+.||.||| +.+|+||||||+|||| +.++.+||+||
T Consensus 76 -~~~~lvme~~g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH-~~gIvHrDIKP~NILl~~~~~~~~vkL~DF 150 (483)
T 3sv0_A 76 -DYNVLVMDLLGPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVH-SKSFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (483)
T ss_dssp -TEEEEEEECCCCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred -CEEEEEEECCCCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHH-HCCEeecccCcceEEEecCCCCCeEEEEeC
Confidence 88999999998 799998532 357999999999999999999999 8999999999999999 68899999999
Q ss_pred chhhccccccC---CCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc----------
Q psy3914 207 EYMEKISEASC---IPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---------- 273 (852)
Q Consensus 207 g~a~~~~~~~~---~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---------- 273 (852)
|++..+..... .++.......||+.|+|||++.+..++.++|||||||++|||++|..||.+.....
T Consensus 151 Gla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~ 230 (483)
T 3sv0_A 151 GLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE 230 (483)
T ss_dssp TTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHH
T ss_pred CcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhh
Confidence 99986544222 12223335779999999999988889999999999999999999999996532211
Q ss_pred ---------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 274 ---------NIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 274 ---------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
....+|..+.+++.+||..+|.+||++.++++.
T Consensus 231 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~ 272 (483)
T 3sv0_A 231 KKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRL 272 (483)
T ss_dssp HHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred ccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 126789999999999999999999999999875
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=307.67 Aligned_cols=239 Identities=14% Similarity=0.228 Sum_probs=190.2
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcC-CC--eEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEee
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-SN--EKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLD 124 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-~g--~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d 124 (852)
..+|++.+.|| .|++++||+|++.. ++ ..|+||++.. ....+.+.+|+++++.++||||+++++
T Consensus 17 ~~~y~~~~~lg--------~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 88 (291)
T 1u46_A 17 EKDLRLLEKLG--------DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 88 (291)
T ss_dssp GGGEEEEEECC------------CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred hhHeeeeeeec--------CCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEE
Confidence 35699999999 99999999998653 33 3689998875 224567889999999999999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
++.+. . .|+||||+. +|.+++... ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+|
T Consensus 89 ~~~~~--~-~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dikp~Nili~~~~~~k 161 (291)
T 1u46_A 89 VVLTP--P-MKMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLE-SKRFIHRDLAARNLLLATRDLVK 161 (291)
T ss_dssp EECSS--S-CEEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEEEETTEEE
T ss_pred EEccC--C-ceeeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHH-hCCcccCCCchheEEEcCCCCEE
Confidence 99875 3 899999997 799888542 246889999999999999999999 89999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCc-----------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRK----------- 270 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~----------- 270 (852)
|+|||++......... ........++..|+|||++.+..++.++|||||||++|+|++ |..||.+..
T Consensus 162 l~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~ 240 (291)
T 1u46_A 162 IGDFGLMRALPQNDDH-YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE 240 (291)
T ss_dssp ECCCTTCEECCC-CCE-EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS
T ss_pred Eccccccccccccccc-hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHcc
Confidence 9999998754322111 111223456778999999977778889999999999999999 999996432
Q ss_pred --cccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 271 --SLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 271 --~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.......+|..+.+++.+||..||.+||++.++++++
T Consensus 241 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l 279 (291)
T 1u46_A 241 GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279 (291)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence 1223467899999999999999999999999999875
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-34 Score=312.67 Aligned_cols=239 Identities=15% Similarity=0.180 Sum_probs=183.6
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHH--HHHHHHHhCCCCCcceEeeeEEc-
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPAL--SYVKKLKTLRHPSILTFLDSVES- 128 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~--~E~~~Lk~LrHPnIlk~~d~~e~- 128 (852)
...+|++++.|| .|++|.||+|+. +++.|+||++.... ..... .++..++.++||||+++++.+..
T Consensus 11 ~~~~y~~~~~lg--------~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 79 (336)
T 3g2f_A 11 DLDNLKLLELIG--------RGRYGAVYKGSL--DERPVAVKVFSFAN-RQNFINEKNIYRVPLMEHDNIARFIVGDERV 79 (336)
T ss_dssp CTTSEEEEEEEE--------ECSSEEEEEEEE--TTEEEEEEEEEGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEE
T ss_pred ChHHhheeeecc--------cCCCeEEEEEEE--CCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCcchhhheeccccc
Confidence 345699999999 999999999977 78999999998622 23333 44444556899999999985542
Q ss_pred --CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC---------CceecccCCCCEEE
Q psy3914 129 --PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDA---------DLRHNHVNHTSIFI 195 (852)
Q Consensus 129 --~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~---------~ivH~DIkp~NIlV 195 (852)
.....+||||||+. +|.+++.. ...++..+..++.||+.||.||| +. +++||||||+||++
T Consensus 80 ~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH-~~~~~~~~~~~~ivH~Dikp~Nill 153 (336)
T 3g2f_A 80 TADGRMEYLLVMEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLH-TELPRGDHYKPAISHRDLNSRNVLV 153 (336)
T ss_dssp CTTSCEEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHH-CCBCCGGGCBCCEECSSCSGGGEEE
T ss_pred ccCCCceEEEEEecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHH-hhhccccccccceeecccccceEEE
Confidence 12347899999997 79999843 34588889999999999999999 78 99999999999999
Q ss_pred ccCCcEEEcccchhhccccccCC----CCcccccccCCCcccCCccccC-------CCCCcchhHHhHHHHHHHHHhCCC
Q psy3914 196 NSCGEWKLGGLEYMEKISEASCI----PMKRYSRYEDQSTYQIPENSLS-------HVTKCSTDMYGLGILIWEVFNGPL 264 (852)
Q Consensus 196 ~~~g~~KL~DFg~a~~~~~~~~~----~~~~~~~~~gt~~Y~APE~~~~-------~~~~~~sDIwSLG~ll~el~tG~~ 264 (852)
+.+|.+||+|||++..+...... .........||+.|+|||++.+ ..++.++|||||||++|||++|..
T Consensus 154 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~ 233 (336)
T 3g2f_A 154 KNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT 233 (336)
T ss_dssp CTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBG
T ss_pred cCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCC
Confidence 99999999999999755432111 1112224568999999999855 345578999999999999999966
Q ss_pred CCCCCcccc---------------------------CcCC----------CChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 265 QSTNRKSLS---------------------------NIDN----------IPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 265 pf~~~~~l~---------------------------~~~~----------ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
||....... .... +++.+.+++.+||..||.+|||+.++++.+
T Consensus 234 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L 313 (336)
T 3g2f_A 234 DLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERM 313 (336)
T ss_dssp GGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred cCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHH
Confidence 542211100 0112 233699999999999999999999998865
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=324.28 Aligned_cols=238 Identities=16% Similarity=0.205 Sum_probs=196.6
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
...|++.+.|| .|+||.||+|+.+. +..|+||++.. ....+.+.+|+++|+.|+||||+++++++.+
T Consensus 183 ~~~~~~~~~lG--------~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 250 (452)
T 1fmk_A 183 RESLRLEVKLG--------QGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--- 250 (452)
T ss_dssp GGGEEEEEEEE--------ECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred hhHceeeeeec--------CCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC---
Confidence 34599999999 99999999999974 56799999987 3345788999999999999999999999865
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+||||||+. +|.++|... ....+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||++
T Consensus 251 ~~~~iv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH-~~~ivHrDlkp~Nill~~~~~~kl~DfG~a 327 (452)
T 1fmk_A 251 EPIYIVTEYMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLA 327 (452)
T ss_dssp SSCEEEECCCTTCBHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECGGGCEEECCCCTT
T ss_pred CceEEEehhhcCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCCChhhEEECCCCCEEECCCccc
Confidence 56899999997 799999532 2246889999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcC
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNID 276 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~ 276 (852)
+...... ........++..|+|||++....++.++|||||||++|||++ |..||.+... .....
T Consensus 328 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~ 404 (452)
T 1fmk_A 328 RLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 404 (452)
T ss_dssp C-----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCT
T ss_pred eecCCCc---eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence 7553321 111123345678999999977788999999999999999999 8999965321 22346
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
.+|+.+.+++.+||..||.+|||+.++++.+.
T Consensus 405 ~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~ 436 (452)
T 1fmk_A 405 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436 (452)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 78999999999999999999999999998764
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=322.46 Aligned_cols=243 Identities=13% Similarity=0.164 Sum_probs=187.5
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhC-CCCCcceEeeeEEcCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSK 131 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~~ 131 (852)
...|.+.+.|| .|++|+||. ....+|+.||||++... ....+.+|+++|+.+ +||||+++++++.+.
T Consensus 23 ~~~y~~~~~LG--------~G~~G~V~~-~~~~~~~~vAvK~~~~~-~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~-- 90 (432)
T 3p23_A 23 KISFCPKDVLG--------HGAEGTIVY-RGMFDNRDVAVKRILPE-CFSFADREVQLLRESDEHPNVIRYFCTEKDR-- 90 (432)
T ss_dssp TEEEEEEEEEE--------ECGGGCEEE-EEESSSSEEEEEEECTT-TEEECHHHHHHHHHSCCCTTBCCEEEEEEET--
T ss_pred cEEEecCCeee--------cCcCEEEEE-EEEeCCeEEEEEEECHH-HHHHHHHHHHHHHhccCCCCcCeEEEEEecC--
Confidence 35699999999 899998663 33458899999999762 233467899999999 799999999999987
Q ss_pred CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc---CC--cEEEcc
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS---CG--EWKLGG 205 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~---~g--~~KL~D 205 (852)
..+||||||+. +|.+++... .....+..+..++.||+.||.||| +.+|+||||||+||+++. +| .+||+|
T Consensus 91 ~~~~lv~E~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlKp~NIll~~~~~~~~~~~kL~D 166 (432)
T 3p23_A 91 QFQYIAIELCAATLQEYVEQK---DFAHLGLEPITLLQQTTSGLAHLH-SLNIVHRDLKPHNILISMPNAHGKIKAMISD 166 (432)
T ss_dssp TEEEEEEECCSEEHHHHHHSS---SCCCCSSCHHHHHHHHHHHHHHHH-HTTCCCCCCSTTSEEECCCBTTTBCCEEECC
T ss_pred CEEEEEEECCCCCHHHHHHhc---CCCccchhHHHHHHHHHHHHHHHH-HCcCEeCCCCHHHEEEecCCCCCceeEEEec
Confidence 89999999999 899988532 233445567789999999999999 899999999999999953 33 477999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCcccc---CCCCCcchhHHhHHHHHHHHHh-CCCCCCCCccc---------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL---SHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKSL--------- 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~l--------- 272 (852)
||++........ .........||+.|+|||++. ...++.++|||||||++|||++ |..||......
T Consensus 167 FG~a~~~~~~~~-~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~ 245 (432)
T 3p23_A 167 FGLCKKLAVGRH-SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGAC 245 (432)
T ss_dssp TTEEECC-------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCC
T ss_pred ccceeeccCCCc-ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccC
Confidence 999875532211 112223467899999999985 4667789999999999999999 88998432111
Q ss_pred --c---CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 --S---NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 --~---~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
. .....+..+.+++.+||..||.+||++.++++| +||.+.
T Consensus 246 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h-----p~f~~~ 290 (432)
T 3p23_A 246 SLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH-----PFFWSL 290 (432)
T ss_dssp CCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS-----TTTCCH
T ss_pred CccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC-----ccccCh
Confidence 0 011224458899999999999999999999998 999764
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-33 Score=306.49 Aligned_cols=239 Identities=17% Similarity=0.180 Sum_probs=192.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHh--CCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKT--LRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~--LrHPnIlk~~d~~e~~~~ 131 (852)
.+|++.+.|| .|++|.||+|+. +|+.|+||++.. .....+.+|.++++. ++||||+++++++.....
T Consensus 42 ~~y~~~~~lg--------~G~~g~Vy~~~~--~~~~vavK~~~~-~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 42 RTIVLQESIG--------KGRFGEVWRGKW--RGEEVAVKIFSS-REERSWFREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHCEEEEEEE--------EETTEEEEEEEE--TTEEEEEEEECG-GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred ccEEEEeeec--------CCCCcEEEEEEE--cCccEEEEEeCc-hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 3599999999 999999999998 589999999986 345567788888887 789999999999987621
Q ss_pred --CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-------cCCceecccCCCCEEEccCCc
Q psy3914 132 --SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLIN-------DADLRHNHVNHTSIFINSCGE 200 (852)
Q Consensus 132 --~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~-------~~~ivH~DIkp~NIlV~~~g~ 200 (852)
..+|+||||+. +|.+++.+ ..+++..+..++.||+.||.|||. +.+++||||||+||+++.+|.
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~ 185 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 185 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSC
T ss_pred ccceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCC
Confidence 27999999998 79999843 468999999999999999999994 579999999999999999999
Q ss_pred EEEcccchhhccccccCCCCcccccccCCCcccCCccccCCC------CCcchhHHhHHHHHHHHHhC----------CC
Q psy3914 201 WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHV------TKCSTDMYGLGILIWEVFNG----------PL 264 (852)
Q Consensus 201 ~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~------~~~~sDIwSLG~ll~el~tG----------~~ 264 (852)
+||+|||++..................||+.|+|||++.+.. ++.++|||||||++|+|++| ..
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~ 265 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 265 (342)
T ss_dssp EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccccc
Confidence 999999998755432211111223456889999999985442 23689999999999999999 67
Q ss_pred CCCCCccc--------------cCcCCC---------ChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 265 QSTNRKSL--------------SNIDNI---------PENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 265 pf~~~~~l--------------~~~~~i---------p~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
||...... .....+ ++.+.+++.+||..||.+||++.+++++++
T Consensus 266 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 266 PYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred CccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 87543110 011222 347889999999999999999999999853
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=328.26 Aligned_cols=238 Identities=16% Similarity=0.205 Sum_probs=200.5
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
...|++.+.|| .|+||.||+|+.+. +..|+||++.. ....+.+.+|+++|+.|+||||+++++++.+
T Consensus 266 ~~~~~~~~~lG--------~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--- 333 (535)
T 2h8h_A 266 RESLRLEVKLG--------QGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--- 333 (535)
T ss_dssp GGGEEEEEEEE--------ECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred hhhhhhheecc--------cCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee---
Confidence 34599999999 99999999999974 56799999987 3445788999999999999999999999865
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
..+||||||+. +|.++|... ....+++..+..++.||+.||.||| +.+|+||||||+||||+.++.+||+|||++
T Consensus 334 ~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH-~~~ivHrDlkp~NIll~~~~~~kl~DFG~a 410 (535)
T 2h8h_A 334 EPIYIVTEYMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLA 410 (535)
T ss_dssp SSCEEEECCCTTEEHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECGGGCEEECCTTST
T ss_pred ccceEeeehhcCCcHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCCCHhhEEEcCCCcEEEcccccc
Confidence 56899999997 799999532 2245889999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcC
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNID 276 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~ 276 (852)
+.+.... ........++..|+|||++....++.++|||||||++|||++ |..||.+... +....
T Consensus 411 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~ 487 (535)
T 2h8h_A 411 RLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 487 (535)
T ss_dssp TTCCCHH---HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCT
T ss_pred eecCCCc---eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence 7543211 111112345678999999977788999999999999999999 8999965321 22346
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
.+|..+.++|.+||..||.+||++.++++.++
T Consensus 488 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 519 (535)
T 2h8h_A 488 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519 (535)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 78999999999999999999999999998765
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=306.50 Aligned_cols=240 Identities=13% Similarity=0.146 Sum_probs=193.0
Q ss_pred CCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 51 SKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 51 ~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
....+|++++.|| .|++|.||+|+.+. .|+||++.. ......+.+|+.+++.++||||+++++++
T Consensus 30 i~~~~~~~~~~lg--------~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 98 (319)
T 2y4i_B 30 IPFEQLEIGELIG--------KGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98 (319)
T ss_dssp SCCSCEECCCBCC--------CSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEE
T ss_pred CCHHHeEEeeEec--------cCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEE
Confidence 3456799999999 99999999999853 499999876 23345677899999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
.+. ..+|+||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++ +|.+||+
T Consensus 99 ~~~--~~~~iv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH-~~~i~H~dlkp~NIl~~-~~~~~l~ 171 (319)
T 2y4i_B 99 MSP--PHLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLH-AKGILHKDLKSKNVFYD-NGKVVIT 171 (319)
T ss_dssp ECS--SCEEEECBCCCSEEHHHHTTS---SCCCCCSHHHHHHHHHHHHHHHHHH-HTTCCCCCCCSTTEEEC---CCEEC
T ss_pred ecC--CceEEEeecccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH-hCCccccCCChhhEEEe-CCCEEEe
Confidence 987 88999999997 79988842 2246899999999999999999999 89999999999999998 7899999
Q ss_pred ccchhhccccccC-CCCcccccccCCCcccCCccccC---------CCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--
Q psy3914 205 GLEYMEKISEASC-IPMKRYSRYEDQSTYQIPENSLS---------HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-- 272 (852)
Q Consensus 205 DFg~a~~~~~~~~-~~~~~~~~~~gt~~Y~APE~~~~---------~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-- 272 (852)
|||++........ ..........|++.|+|||++.. ..++.++|||||||++|+|++|..||.+....
T Consensus 172 Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~ 251 (319)
T 2y4i_B 172 DFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI 251 (319)
T ss_dssp CCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH
T ss_pred ecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 9999764322111 11122233457889999999743 45788999999999999999999999643211
Q ss_pred -----------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 273 -----------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 273 -----------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
.....+|..+.+++.+||..||.+||++.++++.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 298 (319)
T 2y4i_B 252 IWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298 (319)
T ss_dssp HHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHT
T ss_pred HHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 112368899999999999999999999999999864
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-33 Score=329.77 Aligned_cols=237 Identities=13% Similarity=0.179 Sum_probs=194.5
Q ss_pred CeeEec-cccCCCCCCcccCCceEEEEEEEcC--CCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 55 AYEVGE-PAVSFSGCFTQKHTFWKFHGGKKKG--SNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 55 ~Y~i~e-~Ig~~~g~~~~~Gs~~~Vy~a~~k~--~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.|.+.+ .|| .|+||.||+|..+. ++..||||+++. ....+.+.+|+++|+.++||||+++++++..
T Consensus 336 ~~~~~~~~LG--------~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~ 407 (613)
T 2ozo_A 336 NLLIADIELG--------CGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA 407 (613)
T ss_dssp SEEEEEEEEE--------ECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES
T ss_pred ceeEcCcEEe--------cCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc
Confidence 455655 799 99999999998763 567899999986 3456789999999999999999999999976
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
..+||||||+. +|.++|.. ....+++..+..++.||+.||.||| +.+|+||||||+||||+.+|.+||+||
T Consensus 408 ---~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~LH-~~~iiHrDlkp~NILl~~~~~vkL~DF 480 (613)
T 2ozo_A 408 ---EALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLE-EKNFVHRNLAARNVLLVNRHYAKISDF 480 (613)
T ss_dssp ---SSEEEEEECCTTCBHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEEEETTEEEECCC
T ss_pred ---CCeEEEEEeCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHH-HCCEEcCcCCHHHEEEcCCCcEEEeec
Confidence 45999999998 79998842 2356899999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------cc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LS 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~ 273 (852)
|+++.+...... ........+++.|+|||++.+..++.++|||||||++|||++ |..||.+... +.
T Consensus 481 Gla~~~~~~~~~-~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~ 559 (613)
T 2ozo_A 481 GLSKALGADDSY-YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME 559 (613)
T ss_dssp STTTTCC---------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCC
T ss_pred cCcccccCCCce-eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 999855322111 111112335678999999977789999999999999999998 9999965322 22
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
....+|+.+.+++.+||..+|.+||++.++++.+
T Consensus 560 ~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L 593 (613)
T 2ozo_A 560 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM 593 (613)
T ss_dssp CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 3467899999999999999999999999998864
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-33 Score=331.17 Aligned_cols=233 Identities=16% Similarity=0.219 Sum_probs=192.5
Q ss_pred eccccCCCCCCcccCCceEEEEEEE--cCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 59 GEPAVSFSGCFTQKHTFWKFHGGKK--KGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 59 ~e~Ig~~~g~~~~~Gs~~~Vy~a~~--k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
.+.|| .|+||.||+|.. +.++..||||++.. ....+.+.+|+++|+.|+||||++++++++. .
T Consensus 374 ~~~LG--------~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---~ 442 (635)
T 4fl3_A 374 DKELG--------SGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA---E 442 (635)
T ss_dssp EEEEE--------ECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES---S
T ss_pred CCEec--------cCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---C
Confidence 34799 999999999954 45678999999986 2235789999999999999999999999975 4
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
.+||||||+. +|.++|.. ...+++..+..++.||+.||.||| +.+|+||||||+||+|+.++.+||+|||+++
T Consensus 443 ~~~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH-~~~iiHrDLkp~NILl~~~~~~kL~DFGla~ 517 (635)
T 4fl3_A 443 SWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLE-ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 517 (635)
T ss_dssp SEEEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEEEETTEEEECCTTHHH
T ss_pred CEEEEEEccCCCCHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHHH-HCCEeCCCCChHhEEEeCCCCEEEEEcCCcc
Confidence 5899999998 79999842 357899999999999999999999 8999999999999999999999999999998
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDN 277 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~ 277 (852)
.+...... ........+|+.|+|||++.+..++.++|||||||++|||++ |..||.+... ......
T Consensus 518 ~~~~~~~~-~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~ 596 (635)
T 4fl3_A 518 ALRADENY-YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 596 (635)
T ss_dssp HTTC--------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTT
T ss_pred ccccCccc-cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence 65432111 111223345678999999987789999999999999999998 9999965422 223567
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
+|+.+.+++.+||..||.+||++.++++.++
T Consensus 597 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 597 CPREMYDLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 8999999999999999999999999998753
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-32 Score=292.49 Aligned_cols=211 Identities=12% Similarity=0.092 Sum_probs=181.3
Q ss_pred CCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC-----chHHHHHHHHHHHhCCCCCcceE
Q psy3914 48 RDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD-----TYEPALSYVKKLKTLRHPSILTF 122 (852)
Q Consensus 48 r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~-----~~~~~~~E~~~Lk~LrHPnIlk~ 122 (852)
.++....+|++.+.|| .|+++.||+|++..+|+.|+||++.... ....+.+|+..++.++||||+++
T Consensus 25 g~~~~~~~y~i~~~lg--------~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~ 96 (286)
T 3uqc_A 25 GARIANGRYRLLIFHG--------GVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARV 96 (286)
T ss_dssp TCEETTTTEEEEEEEE--------BSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred CCEEecCcEEEEEEEc--------ccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCccee
Confidence 3434556799999999 9999999999999999999999998722 22678899999999999999999
Q ss_pred eeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc
Q psy3914 123 LDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE 200 (852)
Q Consensus 123 ~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~ 200 (852)
++++++. +.+||||||+. +|.+++.. .....++..++.||+.||.||| +.|++||||||+||+++.+|.
T Consensus 97 ~~~~~~~--~~~~lv~e~~~g~~L~~~l~~------~~~~~~~~~i~~ql~~aL~~lH-~~givH~Dikp~NIll~~~g~ 167 (286)
T 3uqc_A 97 LDVVHTR--AGGLVVAEWIRGGSLQEVADT------SPSPVGAIRAMQSLAAAADAAH-RAGVALSIDHPSRVRVSIDGD 167 (286)
T ss_dssp EEEEEET--TEEEEEEECCCEEEHHHHHTT------CCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCSGGGEEEETTSC
T ss_pred eEEEEEC--CcEEEEEEecCCCCHHHHHhc------CCChHHHHHHHHHHHHHHHHHH-HCCCccCCCCcccEEEcCCCC
Confidence 9999988 89999999997 79998832 2456678889999999999999 899999999999999999999
Q ss_pred EEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-------
Q psy3914 201 WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------- 273 (852)
Q Consensus 201 ~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------- 273 (852)
+||+++++ ++| ++.++|||||||++|+|++|..||.+.....
T Consensus 168 ~kl~~~~~------------------------~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~ 216 (286)
T 3uqc_A 168 VVLAYPAT------------------------MPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAER 216 (286)
T ss_dssp EEECSCCC------------------------CTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCB
T ss_pred EEEEeccc------------------------cCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHH
Confidence 99985443 332 5779999999999999999999997643321
Q ss_pred -----------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 274 -----------NIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 274 -----------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
....+|+.+.+++.+||+.||..| |+.++++.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L 260 (286)
T 3uqc_A 217 DTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLM 260 (286)
T ss_dssp CTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHH
T ss_pred HhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHH
Confidence 124689999999999999999999 999999864
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-32 Score=295.49 Aligned_cols=218 Identities=17% Similarity=0.243 Sum_probs=182.1
Q ss_pred CCeeEe-ccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHH-HhCCCCCcceEeeeEEc--C
Q psy3914 54 FAYEVG-EPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKL-KTLRHPSILTFLDSVES--P 129 (852)
Q Consensus 54 ~~Y~i~-e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~L-k~LrHPnIlk~~d~~e~--~ 129 (852)
.+|.+. +.|| .|++|.||.|.++.+++.|+||++.. ...+.+|+.++ +.++||||++++++++. .
T Consensus 17 ~~y~~~~~~lg--------~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 85 (299)
T 3m2w_A 17 DDYKVTSQVLG--------LGINGKVLQIFNKRTQEKFALKMLQD---CPKARREVELHWRASQCPHIVRIVDVYENLYA 85 (299)
T ss_dssp GTEEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEEC---SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred cchhhcCcccc--------cCCCeEEEEEEEcCCCcEEEEEEecc---cHHHHHHHHHHHHhccCCCchhHHhhhhhhcC
Confidence 348886 7799 99999999999999999999999975 35678888887 66689999999999876 1
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc---CCcEEEc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS---CGEWKLG 204 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~---~g~~KL~ 204 (852)
....+||||||+. +|.+++... ....+++..+..++.||+.||.||| +.+++||||||+||+++. ++.+||+
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 86 GRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp TEEEEEEEECCCCSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred CCceEEEEEeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCHHHEEEecCCCCCcEEEe
Confidence 1278999999997 799998542 2346999999999999999999999 899999999999999998 7889999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-----------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS----------- 273 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~----------- 273 (852)
|||++.... +..++.++|||||||++|+|++|..||.+.....
T Consensus 163 Dfg~a~~~~--------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 216 (299)
T 3m2w_A 163 DFGFAKETT--------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 216 (299)
T ss_dssp CCTTCEECT--------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCT
T ss_pred ccccccccc--------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhh
Confidence 999975321 1235678999999999999999999995432111
Q ss_pred ----C----cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 ----N----IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ----~----~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
. ...+++.+.+++.+||..||.+||++.++++| +||.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h-----p~~~~ 262 (299)
T 3m2w_A 217 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH-----PWIMQ 262 (299)
T ss_dssp TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS-----HHHHT
T ss_pred ccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC-----hhhcc
Confidence 0 14678999999999999999999999999997 77754
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-33 Score=313.59 Aligned_cols=243 Identities=13% Similarity=0.144 Sum_probs=189.7
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCC-CCc------
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRH-PSI------ 119 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrH-PnI------ 119 (852)
....|.+++.|| .|+||+||+|++..+|+.||||++.. ....+.+++|+.+++.++| +|+
T Consensus 76 ~~~~~~~~~~LG--------~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~ 147 (413)
T 3dzo_A 76 RPRTLVRGTVLG--------QEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVH 147 (413)
T ss_dssp CCEEEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHH
T ss_pred CceeEEEecccc--------cCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHh
Confidence 334588899999 99999999999999999999999985 2335678999999999987 221
Q ss_pred ---ce------------EeeeEEcCC---CCeEEEEEeecc-cHHHHHHhh---hhcCCCCCHHHHHHHHHHHHHHHHHH
Q psy3914 120 ---LT------------FLDSVESPS---KSLVYLAVEYVE-PIFYHLDNT---LKENNEKKQIYISWGIFQITRALSFL 177 (852)
Q Consensus 120 ---lk------------~~d~~e~~~---~~~~yIVtE~v~-~L~~~L~~~---~~~~~~l~e~~i~~~l~QI~~aL~fL 177 (852)
+. ++..+.... ...+|++|+++. +|.+++... ......+++..+..++.||+.||.||
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 227 (413)
T 3dzo_A 148 LRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASL 227 (413)
T ss_dssp TCBCCCCEEEECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhcccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 11 111112110 134788888887 788888422 12234567788889999999999999
Q ss_pred HhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccc----------cCCCCCcch
Q psy3914 178 INDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENS----------LSHVTKCST 247 (852)
Q Consensus 178 H~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~----------~~~~~~~~s 247 (852)
| +.+|+||||||+||||+.+|.+||+|||+++..... .....| +.|+|||++ .+..++.++
T Consensus 228 H-~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~ 298 (413)
T 3dzo_A 228 H-HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAF 298 (413)
T ss_dssp H-HTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHH
T ss_pred H-hCCcccCCcccceEEEecCCeEEEEeccceeecCCc-------cccCCC-CceeCchhhhccccccccccCcCCCchh
Confidence 9 899999999999999999999999999998754332 223455 799999998 555678899
Q ss_pred hHHhHHHHHHHHHhCCCCCCCCccc-------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 248 DMYGLGILIWEVFNGPLQSTNRKSL-------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 248 DIwSLG~ll~el~tG~~pf~~~~~l-------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
|||||||++|||++|..||.+.... .....+|+.+.+++.+||..||.+||++.++++| +||+.
T Consensus 299 DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~-----~~~~~ 369 (413)
T 3dzo_A 299 DTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET-----PEYEQ 369 (413)
T ss_dssp HHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS-----HHHHH
T ss_pred hHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhC-----HHHHH
Confidence 9999999999999999999654332 2235789999999999999999999999999986 66643
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.7e-33 Score=333.14 Aligned_cols=243 Identities=18% Similarity=0.196 Sum_probs=197.1
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcC-
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESP- 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~- 129 (852)
.+|++++.|| .|++|+||+|.++.+|+.|+||++... .....+.+|+++++.++||||+++++++...
T Consensus 14 grY~i~~~LG--------~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~ 85 (676)
T 3qa8_A 14 GPWEMKERLG--------TGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQ 85 (676)
T ss_dssp ---CCCCCCC--------BCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTC
T ss_pred CCeEEEEEEe--------eCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccc
Confidence 4699999999 999999999999999999999998762 2345688999999999999999999987651
Q ss_pred ---CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCc---E
Q psy3914 130 ---SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE---W 201 (852)
Q Consensus 130 ---~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~---~ 201 (852)
.....|+||||+. +|.+++.. ......+++..+..++.||+.||.||| +.|++||||||+||+++.+|. +
T Consensus 86 ~~~~~~~~~LVmEy~~ggsL~~~L~~-~~~~~~lse~~i~~I~~QLl~aL~yLH-s~gIVHrDLKP~NILl~~~g~~~~v 163 (676)
T 3qa8_A 86 KLAPNDLPLLAMEYCEGGDLRKYLNQ-FENCCGLKEGPIRTLLSDISSALRYLH-ENRIIHRDLKPENIVLQPGPQRLIH 163 (676)
T ss_dssp CCCTTSSCCCEEECCSSCBHHHHHHS-SSCTTCCCSSHHHHHHHHHHHHHHHHH-HTTBCCCCCCSTTEEEECCSSSCEE
T ss_pred cccCCCeEEEEEEeCCCCCHHHHHHh-cccCCCCCHHHHHHHHHHHHHHHHHHH-HCCCccCCCCHHHeEeecCCCceeE
Confidence 1377899999996 79999843 223346888999999999999999999 899999999999999998775 9
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc----------
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS---------- 271 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~---------- 271 (852)
||+|||++...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus 164 KL~DFG~a~~~~~~-----~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~ 238 (676)
T 3qa8_A 164 KIIDLGYAKELDQG-----ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE 238 (676)
T ss_dssp EECSCCCCCBTTSC-----CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC-
T ss_pred EEcccccccccccc-----cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhc
Confidence 99999998754322 122345788999999999888899999999999999999999999853200
Q ss_pred ---------------c------c----CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 272 ---------------L------S----NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 272 ---------------l------~----~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
. . ....+++.+.+++.+||..||.+||++.++++| +||+.
T Consensus 239 ~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~h-----p~F~~ 303 (676)
T 3qa8_A 239 KSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNV-----GCFQA 303 (676)
T ss_dssp -----CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCC-----TTHHH
T ss_pred ccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcC-----HHHHH
Confidence 0 0 012356789999999999999999999999886 78764
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4e-32 Score=326.08 Aligned_cols=238 Identities=17% Similarity=0.246 Sum_probs=196.6
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCC---CeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS---NEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~---g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
...+|++++.|| .|+||+||+|+++.+ +..|+||++.... ..+.+.+|+.+|+.++||||++++++
T Consensus 388 ~~~~y~i~~~LG--------~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~ 459 (656)
T 2j0j_A 388 QRERIELGRCIG--------EGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 459 (656)
T ss_dssp CGGGEEEEEEEE--------CCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccccEEEeeEEe--------eCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 345699999999 999999999998754 4679999887622 23678899999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+.+ +.+||||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||
T Consensus 460 ~~~---~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH-~~givHrDikp~NILl~~~~~vkL 532 (656)
T 2j0j_A 460 ITE---NPVWIIMELCTLGELRSFLQV---RKFSLDLASLILYAYQLSTALAYLE-SKRFVHRDIAARNVLVSSNDCVKL 532 (656)
T ss_dssp ECS---SSCEEEEECCTTCBHHHHHHH---TTTTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEEEETTEEEE
T ss_pred Eec---CceEEEEEcCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHH-hCCccccccchHhEEEeCCCCEEE
Confidence 854 56899999998 79999853 2346899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-----------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS----------- 271 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~----------- 271 (852)
+|||++....... ........+++.|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 533 ~DFG~a~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~ 609 (656)
T 2j0j_A 533 GDFGLSRYMEDST---YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 609 (656)
T ss_dssp CCCCCCCSCCC-------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTC
T ss_pred EecCCCeecCCCc---ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC
Confidence 9999987543321 111123445678999999977788999999999999999997 8999965421
Q ss_pred -ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|+.+.+++.+||..||.+||++.++++.+
T Consensus 610 ~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L 646 (656)
T 2j0j_A 610 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 646 (656)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 234567899999999999999999999999999874
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=322.28 Aligned_cols=227 Identities=19% Similarity=0.146 Sum_probs=186.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcC-CCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-SNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
..+|++.+.|| .|++|+||.|.++. +|+.|+||++.... ....+.+|+++|+.++||||++++++++.
T Consensus 79 ~~~y~i~~~lg--------~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 150 (681)
T 2pzi_A 79 AGQYEVKGCIA--------HGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEH 150 (681)
T ss_dssp TTTEEEEEEEE--------EETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE
T ss_pred CCceEEEEEEe--------eCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEee
Confidence 35799999999 99999999999986 78999999987522 33467899999999999999999999987
Q ss_pred CCCCe-----EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcE
Q psy3914 129 PSKSL-----VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEW 201 (852)
Q Consensus 129 ~~~~~-----~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~ 201 (852)
. +. .||||||+. +|.+++. ..+++..+..++.||+.||.||| +.||+||||||+||+++.+ .+
T Consensus 151 ~--~~~~~~~~~lv~E~~~g~~L~~~~~------~~l~~~~~~~~~~qi~~aL~~lH-~~giiHrDlkp~NIll~~~-~~ 220 (681)
T 2pzi_A 151 T--DRHGDPVGYIVMEYVGGQSLKRSKG------QKLPVAEAIAYLLEILPALSYLH-SIGLVYNDLKPENIMLTEE-QL 220 (681)
T ss_dssp E--CTTSCEEEEEEEECCCCEECC----------CCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECSS-CE
T ss_pred c--CCCCCceeEEEEEeCCCCcHHHHHh------CCCCHHHHHHHHHHHHHHHHHHH-HCCCeecccChHHeEEeCC-cE
Confidence 5 33 799999998 6877662 36899999999999999999999 8999999999999999875 89
Q ss_pred EEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccCc-----C
Q psy3914 202 KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI-----D 276 (852)
Q Consensus 202 KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~~-----~ 276 (852)
||+|||++...... ....||+.|+|||++.+. ++.++|||||||++|+|++|..||.+....... .
T Consensus 221 kl~DFG~a~~~~~~--------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~ 291 (681)
T 2pzi_A 221 KLIDLGAVSRINSF--------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVL 291 (681)
T ss_dssp EECCCTTCEETTCC--------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCCTTCHHH
T ss_pred EEEecccchhcccC--------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccccccccccc
Confidence 99999998754321 245689999999998543 378999999999999999998887543221111 1
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.+++.+.++|.+||..||.+||+..+.+.+
T Consensus 292 ~~~~~l~~li~~~l~~dP~~R~~~~~~l~~ 321 (681)
T 2pzi_A 292 KTYDSYGRLLRRAIDPDPRQRFTTAEEMSA 321 (681)
T ss_dssp HHCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred ccCHHHHHHHhhhccCChhhCCCHHHHHHH
Confidence 245789999999999999999987777665
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-32 Score=300.46 Aligned_cols=227 Identities=10% Similarity=0.065 Sum_probs=180.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC----------chHHHHHHHHHHHhCC--------
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD----------TYEPALSYVKKLKTLR-------- 115 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~----------~~~~~~~E~~~Lk~Lr-------- 115 (852)
.+|++++.|| .|++|+||+|++ +|+.||||++.... ....+.+|+.+|+.|+
T Consensus 20 ~~y~~~~~lG--------~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~ 89 (336)
T 2vuw_A 20 EKLQRCEKIG--------EGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCN 89 (336)
T ss_dssp HHHHTCEEEE--------EETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSS
T ss_pred ccchheeeec--------ccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccc
Confidence 4599999999 999999999998 78999999998632 2378899999999886
Q ss_pred -CCCcceEeeeE-----------------EcC-----------CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHH
Q psy3914 116 -HPSILTFLDSV-----------------ESP-----------SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYIS 164 (852)
Q Consensus 116 -HPnIlk~~d~~-----------------e~~-----------~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~ 164 (852)
||||+++++++ ++. ....+||||||+. +|.+.+.+ ..+++..++
T Consensus 90 ~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~ 164 (336)
T 2vuw_A 90 RTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAK 164 (336)
T ss_dssp BCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHH
T ss_pred cCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHH
Confidence 66666666553 320 1278999999986 34444411 568999999
Q ss_pred HHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC--------------------cEEEcccchhhccccccCCCCcccc
Q psy3914 165 WGIFQITRALSFLINDADLRHNHVNHTSIFINSCG--------------------EWKLGGLEYMEKISEASCIPMKRYS 224 (852)
Q Consensus 165 ~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g--------------------~~KL~DFg~a~~~~~~~~~~~~~~~ 224 (852)
.++.||+.||.|||.+.+|+||||||+|||++.+| .+||+|||+++.... .
T Consensus 165 ~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~---------~ 235 (336)
T 2vuw_A 165 SILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD---------G 235 (336)
T ss_dssp HHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET---------T
T ss_pred HHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC---------C
Confidence 99999999999999668999999999999999987 899999999985432 1
Q ss_pred cccCCCcccCCccccCCCCCcchhHHhHHHH-HHHHHhCCCCCCCCc-------------ccc------CcCCCChhHHH
Q psy3914 225 RYEDQSTYQIPENSLSHVTKCSTDMYGLGIL-IWEVFNGPLQSTNRK-------------SLS------NIDNIPENLKR 284 (852)
Q Consensus 225 ~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~l-l~el~tG~~pf~~~~-------------~l~------~~~~ip~~L~~ 284 (852)
...||+.|+|||++.+.. +.++||||||++ .++++.|..||.+.. ... ....+++.+.+
T Consensus 236 ~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d 314 (336)
T 2vuw_A 236 IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQE 314 (336)
T ss_dssp EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHH
T ss_pred cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHH
Confidence 346889999999997655 789999998777 788889999984310 000 12246788999
Q ss_pred HHHHhccCCCCCCCCHHHHH-HhhcCCCCCCc
Q psy3914 285 VYLELISERPNQRPNPADFI-MRNRKPGGYFK 315 (852)
Q Consensus 285 li~~lL~~nP~~Rps~~elL-~~l~~~~~fF~ 315 (852)
+|++||..| |+.+++ +| +||+
T Consensus 315 li~~~L~~d-----sa~e~l~~H-----p~f~ 336 (336)
T 2vuw_A 315 FHRTMLNFS-----SATDLLCQH-----SLFK 336 (336)
T ss_dssp HHHHGGGSS-----SHHHHHHHC-----GGGC
T ss_pred HHHHHhccC-----CHHHHHhcC-----CCcC
Confidence 999999976 999999 87 8884
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-26 Score=272.49 Aligned_cols=176 Identities=9% Similarity=-0.044 Sum_probs=125.6
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCC------------CchHHHHHHHHHHHhC-CCCCcceEeeeEEcCCCCeEEEEE
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSA------------DTYEPALSYVKKLKTL-RHPSILTFLDSVESPSKSLVYLAV 138 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~------------~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~~~~~~~yIVt 138 (852)
.|+.+.++.+++...|+.|+||++.+. ...+.+.+|+++|+++ .||||++++++++++ ..+||||
T Consensus 244 ~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~--~~~yLVM 321 (569)
T 4azs_A 244 AGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENA--QSGWLVM 321 (569)
T ss_dssp --------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECS--SEEEEEE
T ss_pred cCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEEC--CEEEEEE
Confidence 445555556666667999999999762 2335689999999999 699999999999998 9999999
Q ss_pred eecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhcccccc
Q psy3914 139 EYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEAS 216 (852)
Q Consensus 139 E~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~ 216 (852)
|||. +|.++|.+ .+.+++. .++.||+.||.||| +.|||||||||+|||++.+|.+||+|||+++......
T Consensus 322 Eyv~G~~L~d~i~~----~~~l~~~---~I~~QIl~AL~ylH-~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 322 EKLPGRLLSDMLAA----GEEIDRE---KILGSLLRSLAALE-KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp ECCCSEEHHHHHHT----TCCCCHH---HHHHHHHHHHHHHH-HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred ecCCCCcHHHHHHh----CCCCCHH---HHHHHHHHHHHHHH-HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 9999 79999943 3567665 46899999999999 9999999999999999999999999999987543322
Q ss_pred CCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhC
Q psy3914 217 CIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG 262 (852)
Q Consensus 217 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG 262 (852)
......+||+.|+|||++.+. +...+|+|++|+++|++..+
T Consensus 394 ----~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~ 434 (569)
T 4azs_A 394 ----SWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQP 434 (569)
T ss_dssp ----CCSHHHHHHHHHHHHHHC------------------CCCCTT
T ss_pred ----ccccCceechhhccHHHhCCC-CCCcccccccccchhhhccc
Confidence 223356799999999998654 55689999999998877554
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.3e-21 Score=226.15 Aligned_cols=181 Identities=8% Similarity=-0.073 Sum_probs=134.5
Q ss_pred eccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC----------chHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 59 GEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD----------TYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 59 ~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~----------~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.+.|| .|+|+.||+|.. .+..+++|+..... ..+.+.+|+++|++++||||+++..+...
T Consensus 341 ~~~LG--------~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~ 410 (540)
T 3en9_A 341 EHLIG--------KGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD 410 (540)
T ss_dssp ---------------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE
T ss_pred CCEEe--------eCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe
Confidence 56788 999999999943 67889999865411 13447899999999999999944333334
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. ...||||||+. +|.+++.. +..++.||+.||.||| +.+|+||||||+||+++. .+||+||
T Consensus 411 ~--~~~~lVmE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH-~~gIiHrDiKp~NILl~~--~~kL~DF 473 (540)
T 3en9_A 411 L--DNKRIMMSYINGKLAKDVIED------------NLDIAYKIGEIVGKLH-KNDVIHNDLTTSNFIFDK--DLYIIDF 473 (540)
T ss_dssp T--TTTEEEEECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHH-HTTEECTTCCTTSEEESS--SEEECCC
T ss_pred C--CccEEEEECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHH-HCcCccCCCCHHHEEECC--eEEEEEC
Confidence 4 55799999997 79998832 5678999999999999 899999999999999998 9999999
Q ss_pred chhhccccccCCC---CcccccccCCCcccCCccccC--CCCCcchhHHhHHHHHHHHHhCCCCC
Q psy3914 207 EYMEKISEASCIP---MKRYSRYEDQSTYQIPENSLS--HVTKCSTDMYGLGILIWEVFNGPLQS 266 (852)
Q Consensus 207 g~a~~~~~~~~~~---~~~~~~~~gt~~Y~APE~~~~--~~~~~~sDIwSLG~ll~el~tG~~pf 266 (852)
|+++......... ........||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.+|
T Consensus 474 Gla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 474 GLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp TTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 9998654321100 001224678999999999844 56777889999988877777766554
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-18 Score=186.86 Aligned_cols=127 Identities=6% Similarity=0.002 Sum_probs=104.5
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC--------------------chHHHHHHHHHHHhCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD--------------------TYEPALSYVKKLKTLR 115 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~--------------------~~~~~~~E~~~Lk~Lr 115 (852)
|.+++.|| .|++|.||.|.+ .+|+.|+||++.... ....+.+|+.+|+.++
T Consensus 92 ~~~~~~iG--------~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 92 DAIGKLMG--------EGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp SEEEEEEE--------ECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred EEecCEec--------cCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 55669999 999999999999 789999999997511 2456889999999999
Q ss_pred CCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCE
Q psy3914 116 HPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSI 193 (852)
Q Consensus 116 HPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NI 193 (852)
| +++++++.. +..|+||||+. +|.+ +. ......++.||+.||.||| +.|++||||||+||
T Consensus 163 ~---~~v~~~~~~---~~~~lvmE~~~g~~L~~-l~----------~~~~~~i~~qi~~~l~~lH-~~giiHrDlkp~NI 224 (282)
T 1zar_A 163 G---LAVPKVYAW---EGNAVLMELIDAKELYR-VR----------VENPDEVLDMILEEVAKFY-HRGIVHGDLSQYNV 224 (282)
T ss_dssp T---SSSCCEEEE---ETTEEEEECCCCEEGGG-CC----------CSCHHHHHHHHHHHHHHHH-HTTEECSCCSTTSE
T ss_pred C---CCcCeEEec---cceEEEEEecCCCcHHH-cc----------hhhHHHHHHHHHHHHHHHH-HCCCEeCCCCHHHE
Confidence 5 555555543 35699999997 6766 41 1234568999999999999 99999999999999
Q ss_pred EEccCCcEEEcccchhh
Q psy3914 194 FINSCGEWKLGGLEYME 210 (852)
Q Consensus 194 lV~~~g~~KL~DFg~a~ 210 (852)
+++ +|.+||+|||+++
T Consensus 225 Ll~-~~~vkl~DFG~a~ 240 (282)
T 1zar_A 225 LVS-EEGIWIIDFPQSV 240 (282)
T ss_dssp EEE-TTEEEECCCTTCE
T ss_pred EEE-CCcEEEEECCCCe
Confidence 999 9999999999986
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.4e-16 Score=167.27 Aligned_cols=134 Identities=7% Similarity=0.007 Sum_probs=106.7
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeE--EEEEEEeCCC-c-------------------------hHHHHH
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEK--VTIFLNDSAD-T-------------------------YEPALS 106 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~--VaVKv~~~~~-~-------------------------~~~~~~ 106 (852)
-|++++.|| .|+++.||.|.+..+|+. ||||++.... . ...+.+
T Consensus 48 ~~~i~~~ig--------~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (258)
T 1zth_A 48 ITAMGGVIS--------TGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEK 119 (258)
T ss_dssp EEEEEEEEE--------ECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHH
T ss_pred chhhCCEEe--------ecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHH
Confidence 489999999 999999999999778999 9999976511 0 136789
Q ss_pred HHHHHHhCCCCCc--ceEeeeEEcCCCCeEEEEEeecc-------cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHH
Q psy3914 107 YVKKLKTLRHPSI--LTFLDSVESPSKSLVYLAVEYVE-------PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFL 177 (852)
Q Consensus 107 E~~~Lk~LrHPnI--lk~~d~~e~~~~~~~yIVtE~v~-------~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fL 177 (852)
|+..|+.|+|++| ..+++. ...||||||+. .|.++... .++..+..++.||+.+|.||
T Consensus 120 E~~~l~~l~~~~i~~p~~~~~------~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~l 186 (258)
T 1zth_A 120 EFRNLERAKEAGVSVPQPYTY------MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRL 186 (258)
T ss_dssp HHHHHHHHHHTTCCCCCEEEE------ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEEEc------CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHH
Confidence 9999999998864 334432 23689999994 35554311 12445778899999999999
Q ss_pred HhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 178 INDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 178 H~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
|..+|++||||||+||+++. .++|+|||++..
T Consensus 187 H~~~givHrDlkp~NILl~~--~~~liDFG~a~~ 218 (258)
T 1zth_A 187 YQEAELVHADLSEYNIMYID--KVYFIDMGQAVT 218 (258)
T ss_dssp HHTSCEECSSCSTTSEEESS--SEEECCCTTCEE
T ss_pred HHHCCEEeCCCCHHHEEEcC--cEEEEECccccc
Confidence 97799999999999999988 899999999864
|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.5e-13 Score=160.67 Aligned_cols=256 Identities=14% Similarity=0.176 Sum_probs=219.9
Q ss_pred ccCHHHHhHHHHhhhhhhccCCcccccccchhhhHhhhhcCC--CcccchhhhhhhcccCChhhhhcchhhhhhhccccC
Q psy3914 330 MKDKIDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGE--AGASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSN 407 (852)
Q Consensus 330 ~k~~~eK~~Ff~~L~~~l~~fP~~~~~~kiLP~Ll~~~e~~~--~~~~vL~~llki~~~l~~~ef~~~i~P~i~~LF~~~ 407 (852)
-.+..-+..-.+.|......++.......++|.|+..+.... .....+..+-.++..++.+.+...++|.+..++..+
T Consensus 175 d~~~~VR~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~~~~d~ 254 (588)
T 1b3u_A 175 DDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDK 254 (588)
T ss_dssp CSCHHHHHHHHHHHHHHHHTSCHHHHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSCHHHHHHHTHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHHHHHHHHhcHHhHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHccCC
Confidence 455667777778888777777776666788998887776543 222345566777888888888899999999999999
Q ss_pred CHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCcc----chhhhHHHHHHHHhc
Q psy3914 408 DRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYN----NLNVETLRHFARLQA 483 (852)
Q Consensus 408 dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~----~l~~~lL~~l~kl~~ 483 (852)
+..+|...++.|..+...++++.+...++|.+...+.|.++.||..++.++..++..+... .....++|.+.++.
T Consensus 255 ~~~vR~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~l- 333 (588)
T 1b3u_A 255 SWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELV- 333 (588)
T ss_dssp SHHHHHHHHHTHHHHHHHHCHHHHHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhChhhhhhHHHHHHHHHHHHHh-
Confidence 9999999999999999988888888899999999999999999999999999999888765 34567899998887
Q ss_pred cCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccC
Q psy3914 484 KDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTD 563 (852)
Q Consensus 484 ~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D 563 (852)
+|+++.||..++.+|+.|++.++.......++|.|...++|+...+|.+++.++..+...++.+.....++|.|..++.|
T Consensus 334 ~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~l~p~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~lp~l~~~~~d 413 (588)
T 1b3u_A 334 SDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAED 413 (588)
T ss_dssp TCSCHHHHHHHHTTGGGGHHHHCHHHHHHHTHHHHHHHHTCSCHHHHHHHHTTCHHHHHHSCHHHHHHHHHHHHHHHHTC
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcC
Confidence 69999999999999999999999877677899999999999999999999999999999898888889999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHhhh
Q psy3914 564 PEKSVRDSAFKTIKGFLGKLEQV 586 (852)
Q Consensus 564 ~~~~Vr~~a~~~i~~~l~~le~~ 586 (852)
+++.||..++.+|..+...+...
T Consensus 414 ~~~~vr~~~~~~l~~l~~~~~~~ 436 (588)
T 1b3u_A 414 AKWRVRLAIIEYMPLLAGQLGVE 436 (588)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCGG
T ss_pred CCchHHHHHHHHHHHHHHHcCHH
Confidence 99999999999999888777653
|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.9e-13 Score=159.78 Aligned_cols=247 Identities=15% Similarity=0.179 Sum_probs=205.9
Q ss_pred cCHHHHhHHHHhhhhhhccCCcccccccchhhhHhhhhcCC--CcccchhhhhhhcccCChhhhhcchhhhhhhccccCC
Q psy3914 331 KDKIDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGE--AGASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSND 408 (852)
Q Consensus 331 k~~~eK~~Ff~~L~~~l~~fP~~~~~~kiLP~Ll~~~e~~~--~~~~vL~~llki~~~l~~~ef~~~i~P~i~~LF~~~d 408 (852)
.+..-+......|......+++......++|.|+..+.... ....++..+-.++..+..+.+...++|.|..++...+
T Consensus 336 ~~~~vR~~a~~~l~~l~~~~~~~~~~~~l~p~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~lp~l~~~~~d~~ 415 (588)
T 1b3u_A 336 ANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAK 415 (588)
T ss_dssp SCHHHHHHHHTTGGGGHHHHCHHHHHHHTHHHHHHHHTCSCHHHHHHHHTTCHHHHHHSCHHHHHHHHHHHHHHHHTCSS
T ss_pred CCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcCCC
Confidence 44556666666666665555555555578888888776542 1223344444555666666677889999999999999
Q ss_pred HHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCc
Q psy3914 409 RATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQG 488 (852)
Q Consensus 409 r~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~ 488 (852)
..+|..+++.+..++..+..+.+.+.|+|.+...+.|.++.||+.++.++..++..++.......++|.+..+. .|+.+
T Consensus 416 ~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~llp~l~~~~-~~~~~ 494 (588)
T 1b3u_A 416 WRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMS-GDPNY 494 (588)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCHHHHHHHTHHHHHHTT-TCSCH
T ss_pred chHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHh-hCCCH
Confidence 99999999999999999998888889999999999999999999999999999988877655678899998876 69999
Q ss_pred ceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccCCChhh
Q psy3914 489 GIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSV 568 (852)
Q Consensus 489 ~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~V 568 (852)
.+|..++.|++.|+..++.......++|.+.+.++|+.+.+|.+++.++..+...++.+.+...++|.|..++.|++..|
T Consensus 495 ~~R~~a~~~l~~l~~~~~~~~~~~~~~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~p~l~~l~~d~d~~v 574 (588)
T 1b3u_A 495 LHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDV 574 (588)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHGGGCSCHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCSSHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCchHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHcCCCchhH
Confidence 99999999999999999987767788899999999999999999999999999999988777899999999999999999
Q ss_pred HHHHHHHHHH
Q psy3914 569 RDSAFKTIKG 578 (852)
Q Consensus 569 r~~a~~~i~~ 578 (852)
|..|..++..
T Consensus 575 r~~a~~al~~ 584 (588)
T 1b3u_A 575 KYFAQEALTV 584 (588)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998888764
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.40 E-value=9e-14 Score=155.25 Aligned_cols=131 Identities=11% Similarity=0.027 Sum_probs=97.3
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----------------Cch--------HHHHHHHHHH
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----------------DTY--------EPALSYVKKL 111 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----------------~~~--------~~~~~E~~~L 111 (852)
|.|+.+|| .|+++.||.|.+. +|+.||||++... ... -.+.+|+..|
T Consensus 97 Y~I~~~IG--------~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL 167 (397)
T 4gyi_A 97 YSVGSRIG--------VGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFM 167 (397)
T ss_dssp SEEEEEEE--------ECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCEee--------eCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHH
Confidence 99999999 9999999999985 6899999998640 000 1234677778
Q ss_pred HhCCCCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccC
Q psy3914 112 KTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVN 189 (852)
Q Consensus 112 k~LrHPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIk 189 (852)
.+|.+.++.. ...+... ..+|||||+. +|..+. .. .....++.||+.+|.+|| .+||||||||
T Consensus 168 ~rL~~~gv~v-p~p~~~~---~~~LVME~i~G~~L~~l~--------~~--~~~~~l~~qll~~l~~lH-~~gIVHrDLK 232 (397)
T 4gyi_A 168 KALYEEGFPV-PEPIAQS---RHTIVMSLVDALPMRQVS--------SV--PDPASLYADLIALILRLA-KHGLIHGDFN 232 (397)
T ss_dssp HHHHHTTCSC-CCEEEEE---TTEEEEECCSCEEGGGCC--------CC--SCHHHHHHHHHHHHHHHH-HTTEECSCCS
T ss_pred HHHHhcCCCC-Ceeeecc---CceEEEEecCCccHhhhc--------cc--HHHHHHHHHHHHHHHHHH-HCCCcCCCCC
Confidence 8886555432 2222221 2479999998 564332 11 134567899999999999 8999999999
Q ss_pred CCCEEEccCCc----------EEEcccchhh
Q psy3914 190 HTSIFINSCGE----------WKLGGLEYME 210 (852)
Q Consensus 190 p~NIlV~~~g~----------~KL~DFg~a~ 210 (852)
|.|||++++|+ +.|+||+-+.
T Consensus 233 p~NILl~~dgd~~d~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 233 EFNILIREEKDAEDPSSITLTPIIIXFPQMV 263 (397)
T ss_dssp TTSEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred HHHEEEeCCCCcccccccccceEEEEeCCcc
Confidence 99999998874 8899999875
|
| >2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.94 E-value=5.5e-09 Score=108.93 Aligned_cols=194 Identities=14% Similarity=0.164 Sum_probs=157.9
Q ss_pred CChhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCC---hHHHhHhHHHHHHhhcC-CCcHHHHHHHHHHHHHhc
Q psy3914 387 LEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVP---DAIVNEQIFQQVALGFL-DTNPTIREQTVKSIIHLA 462 (852)
Q Consensus 387 l~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~---~~~v~~~I~P~l~~g~~-D~~~~iRe~tlksi~~l~ 462 (852)
++..+-..++-|.+...+.+.+...|...+..|..++...+ ... ...|++.|...+. |.+..||..+++.+-.|+
T Consensus 7 ~~~~di~~~l~~~l~~~l~s~~w~~R~~a~~~L~~l~~~~~~~~~~~-~~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la 85 (242)
T 2qk2_A 7 LDPVDILSKMPKDFYDKLEEKKWTLRKESLEVLEKLLTDHPKLENGE-YGALVSALKKVITKDSNVVLVAMAGKCLALLA 85 (242)
T ss_dssp TSCBCCGGGSCTTHHHHHTCSSHHHHHHHHHHHHHHHHHCSSBCCCC-CHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred CCcccccccCCHHHHhhhccCCHHHHHHHHHHHHHHHccCCCCCCCC-HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence 34444456677778888899999999998998888877532 222 3678999999995 999999999999999999
Q ss_pred ccCCcc--chhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHH
Q psy3914 463 PKLNYN--NLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAAT 540 (852)
Q Consensus 463 ~kl~~~--~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~ 540 (852)
..+... ..-..++|.+.... +|....||..+..+|..++..++. ..+++.+...++|..+.+|..++..+..+
T Consensus 86 ~~l~~~~~~~~~~ilp~ll~~l-~d~~~~vr~~a~~aL~~~~~~~~~----~~ll~~l~~~l~~~~~~vr~~~l~~l~~~ 160 (242)
T 2qk2_A 86 KGLAKRFSNYASACVPSLLEKF-KEKKPNVVTALREAIDAIYASTSL----EAQQESIVESLSNKNPSVKSETALFIARA 160 (242)
T ss_dssp HHHGGGGHHHHHHHHHHHHHGG-GCCCHHHHHHHHHHHHHHHTTSCH----HHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHcCCH----HHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 887653 22345788888776 699999999999999999987752 45778888999999999999999999887
Q ss_pred hhccCHH----HHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhhh
Q psy3914 541 QQYFLLS----EVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQV 586 (852)
Q Consensus 541 ~~~~~~~----~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~~ 586 (852)
...++++ .....++|.|..++.|++..||..|+.+|..+...+...
T Consensus 161 l~~~~~~~~~~~~l~~l~p~l~~~l~D~~~~VR~~A~~~l~~l~~~vg~~ 210 (242)
T 2qk2_A 161 LTRTQPTALNKKLLKLLTTSLVKTLNEPDPTVRDSSAEALGTLIKLMGDK 210 (242)
T ss_dssp HTTCCGGGCCHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHcCCCCccHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHcCHH
Confidence 6665422 344689999999999999999999999999999888754
|
| >1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A | Back alignment and structure |
|---|
Probab=98.92 E-value=5.8e-09 Score=117.79 Aligned_cols=194 Identities=15% Similarity=0.110 Sum_probs=153.8
Q ss_pred hhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChH--HHhH-hHHHHHHhhcCCCcHHHHHHHHHHHHHhcccC---
Q psy3914 392 YQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDA--IVNE-QIFQQVALGFLDTNPTIREQTVKSIIHLAPKL--- 465 (852)
Q Consensus 392 f~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~--~v~~-~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl--- 465 (852)
+...+++.+..+....+..+|...++.|..++...... ..-. .|+|.++.++.|.++.||.+++..+..++...
T Consensus 214 ~~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~ 293 (462)
T 1ibr_B 214 ERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDL 293 (462)
T ss_dssp HHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 44567888888888899999999999998888776542 1223 89999999999999999999999888877542
Q ss_pred -----------------Cccchh---hhHHHHHHHHhc------cCCCcceeeehhhhhcccccccChhhHHHHHHHHHH
Q psy3914 466 -----------------NYNNLN---VETLRHFARLQA------KDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFS 519 (852)
Q Consensus 466 -----------------~~~~l~---~~lL~~l~kl~~------~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~ 519 (852)
....++ ..++|.+.+... .|.++.+|..++.||+.++..++.. ....+++.+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~l~~~l~~~d~d~~~~~~~~r~~a~~~L~~l~~~~~~~-~~~~~~~~l~ 372 (462)
T 1ibr_B 294 AIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDD-IVPHVLPFIK 372 (462)
T ss_dssp HHHHCCTTCSSSCSSCCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTTT-HHHHHHHHHH
T ss_pred HHhcccccccCCCccchhHHHHHHHhhhccHHHHHHHHhcccccccccchHHHHHHHHHHHHHHhccHH-HHHHHHHHHH
Confidence 011111 456777655442 2357899999999999999999954 4457778888
Q ss_pred hhccCCChHHHHHHHHHHHHHhhccCHH---HHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhhh
Q psy3914 520 RAMRDPFPPARNAGVLALAATQQYFLLS---EVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQV 586 (852)
Q Consensus 520 r~lkDp~~~~R~a~l~~l~~~~~~~~~~---~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~~ 586 (852)
..++|+....|.+++.++..+.+....+ .....++|.|.+++.|++..||..|+.++..|...+...
T Consensus 373 ~~l~~~~~~~r~aal~~l~~l~~~~~~~~~~~~l~~~~~~l~~~l~d~~~~Vr~~a~~~l~~~~~~~~~~ 442 (462)
T 1ibr_B 373 EHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEA 442 (462)
T ss_dssp HHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTTTTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHGGGG
T ss_pred HHhcCCChHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccc
Confidence 8999999999999999999888755422 334679999999999999999999999999999988764
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=3.6e-09 Score=111.32 Aligned_cols=135 Identities=11% Similarity=-0.015 Sum_probs=103.8
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCC-CCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLR-HPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~~~ 131 (852)
.|++...++ .++...||++.. .+..+++|+... ......+.+|+.+|+.|. |..+.+++++..+.
T Consensus 15 ~~~~~~~~~--------g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~-- 82 (263)
T 3tm0_A 15 KYRCVKDTE--------GMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHD-- 82 (263)
T ss_dssp TSEEEECCS--------CCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEET--
T ss_pred cceeEeecc--------CCCCCeEEEEEC--CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecC--
Confidence 388877777 567788999875 367899999875 123346889999999985 67888999998877
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-----------------------------
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLIND----------------------------- 180 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~----------------------------- 180 (852)
+..|+|||++. +|...+. +......++.+++.+|..||.-
T Consensus 83 ~~~~lv~e~i~G~~l~~~~~---------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (263)
T 3tm0_A 83 GWSNLLMSEADGVLCSEEYE---------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADV 153 (263)
T ss_dssp TEEEEEEECCSSEEHHHHCC---------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCC
T ss_pred CceEEEEEecCCeehhhccC---------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccc
Confidence 88999999999 6765431 1112345678999999999940
Q ss_pred -----------------------------CCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 181 -----------------------------ADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 181 -----------------------------~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
..++|||++|.||+++.++.+.|+||+.+.
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 154 DCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 348999999999999876556799999864
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.76 E-value=3.3e-08 Score=103.00 Aligned_cols=122 Identities=11% Similarity=0.009 Sum_probs=89.9
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCC--cceEeeeEEcCCCCeEEEEEeecc--cHHHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPS--ILTFLDSVESPSKSLVYLAVEYVE--PIFYH 147 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPn--Ilk~~d~~e~~~~~~~yIVtE~v~--~L~~~ 147 (852)
.|....||++.. .+|..++||+.... ....+.+|+..++.+++.+ +.+++.+.... +..|+||||+. +|.
T Consensus 30 gg~~~~v~~~~~-~~g~~~vlK~~~~~-~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~--~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 30 GCSDAAVFRLSA-QGRPVLFVKTDLSG-ALNELQDEAARLSWLATTGVPCAAVLDVVTEA--GRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp TTSSCEEEEEEC-TTSCCEEEEEECSC-TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECS--SCEEEEEECCSSEETT--
T ss_pred CCCCceEEEEec-CCCCeEEEEeCCcc-cchhhhHHHHHHHHHHhCCCCCCeEEEeccCC--CCCEEEEEecCCcccC--
Confidence 466688999865 46778999998753 3346788999999886544 56788888876 77999999998 553
Q ss_pred HHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC---------------------------------------------
Q psy3914 148 LDNTLKENNEKKQIYISWGIFQITRALSFLINDAD--------------------------------------------- 182 (852)
Q Consensus 148 L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~--------------------------------------------- 182 (852)
. ..... ..++.+++..|..|| ...
T Consensus 104 ~-------~~~~~---~~~~~~l~~~l~~lh-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
T 1nd4_A 104 S-------SHLAP---AEKVSIMADAMRRLH-TLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFA 172 (264)
T ss_dssp T-------SCCCH---HHHHHHHHHHHHHHT-TSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHH
T ss_pred c-------CcCCH---hHHHHHHHHHHHHHh-CCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHH
Confidence 2 11111 244566777777777 332
Q ss_pred -------------ceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 183 -------------LRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 183 -------------ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
++|||++|.||+++.++.+.|+|||.+.
T Consensus 173 ~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 173 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 9999999999999877667799999974
|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* | Back alignment and structure |
|---|
Probab=98.70 E-value=6.1e-08 Score=119.32 Aligned_cols=256 Identities=11% Similarity=0.120 Sum_probs=180.7
Q ss_pred hccCHHHHhHHHHhhhhhhccCCccccc-------ccchhhhHhhhhcCCC--cccchhhhhhhcccCChh--hhhcchh
Q psy3914 329 QMKDKIDKNKFFNGLASAIDKFPKLISC-------HKVLPQLINAFEYGEA--GASVLSPLFKIGQMLEHE--DYQAKIV 397 (852)
Q Consensus 329 ~~k~~~eK~~Ff~~L~~~l~~fP~~~~~-------~kiLP~Ll~~~e~~~~--~~~vL~~llki~~~l~~~--ef~~~i~ 397 (852)
...+...+..-+..|......+|+.+.. ..++|.|+..+..... ...++..+-.+....+.. .+...++
T Consensus 138 ~~~~~~~r~~al~~L~~i~~~~~~~~~~~~~~~~~~~il~~l~~~l~~~~~~vR~~A~~aL~~~~~~~~~~~~~~~~~~l 217 (852)
T 4fdd_A 138 DSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFI 217 (852)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHTTHHHHCSSSSCHHHHHHHHTTTTTCSSHHHHHHHHHHHHTTTTTTCHHHHTSHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHhHHHhchhhhcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 3345566777777777777666665432 3467777766653321 111222222232222221 1233678
Q ss_pred hhhhhccccCCHHHHHHHHHHHHHHHccCChHH--HhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCcc----chh
Q psy3914 398 PCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAI--VNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYN----NLN 471 (852)
Q Consensus 398 P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~--v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~----~l~ 471 (852)
|.+.++....+..+|...++.|..++...+... ..+.|++.+..++.|.++.||.+++..+..++..-..+ ..-
T Consensus 218 ~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~~~~l~~l~~~l~~~~~~~~~~vr~~a~e~l~~l~~~~~~~~~~~~~~ 297 (852)
T 4fdd_A 218 ENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHL 297 (852)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHHHHHCHHHHGGGHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTSTTHHHHHTTTH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHhcchhHHHHHHHHH
Confidence 888888888999999988888888877655331 22468999999999999999999999999888642111 112
Q ss_pred hhHHHHHHHHh----------ccC-----------CCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHH
Q psy3914 472 VETLRHFARLQ----------AKD-----------DQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPAR 530 (852)
Q Consensus 472 ~~lL~~l~kl~----------~~D-----------~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R 530 (852)
..++|.+.... ..| ..+.||..++.||+.++..++.... ..+++.+...+.|+...+|
T Consensus 298 ~~l~p~ll~~l~~~e~d~~~~~~d~~ed~~~dd~~~~~~vr~~a~~~L~~la~~~~~~~~-~~l~~~l~~~l~~~~~~~R 376 (852)
T 4fdd_A 298 PKLIPVLVNGMKYSDIDIILLKGDVEGGSGGDDTISDWNLRKCSAAALDVLANVYRDELL-PHILPLLKELLFHHEWVVK 376 (852)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHHC------------CCCCHHHHHHHHHHHHHHHHGGGGH-HHHHHHHHHHHTCSSHHHH
T ss_pred HHHHHHHHHHcCCcHhHHHHhcCCcccccccccccccchHHHHHHHHHHHHHHhccHHHH-HHHHHHHHHHhcCCCHHHH
Confidence 35666665443 123 5789999999999999999986543 4677888888999999999
Q ss_pred HHHHHHHHHHhhccCH--HHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhh
Q psy3914 531 NAGVLALAATQQYFLL--SEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQ 585 (852)
Q Consensus 531 ~a~l~~l~~~~~~~~~--~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~ 585 (852)
.+|+.++..+.+..+. ......++|.|..++.|++..||..|..++..|...+..
T Consensus 377 ~aa~~alg~i~~~~~~~~~~~l~~~l~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~ 433 (852)
T 4fdd_A 377 ESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVS 433 (852)
T ss_dssp HHHHHHHHHTTTTTHHHHGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999999988775542 134578999999999999999999999999988877754
|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A | Back alignment and structure |
|---|
Probab=98.68 E-value=3.4e-07 Score=117.20 Aligned_cols=281 Identities=12% Similarity=0.099 Sum_probs=193.1
Q ss_pred CChhHHHHHHHhccCCCCCCCCHH-HHHHhhcCCCCCCcc--h-HHHHH-HHHHHhhccCHHHHhHHHHhhhhhhccCCc
Q psy3914 278 IPENLKRVYLELISERPNQRPNPA-DFIMRNRKPGGYFKN--D-LIDAL-LFLEEIQMKDKIDKNKFFNGLASAIDKFPK 352 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~-elL~~l~~~~~fF~n--~-lv~~l-~~Leel~~k~~~eK~~Ff~~L~~~l~~fP~ 352 (852)
.+..+..++.+|.++|+..|-.+. ++.+.+.. +++.. . .-..+ ..++.+.-.+...+..-...|......+++
T Consensus 4 ~~~~l~~lL~~l~s~d~~~R~~A~~~L~~~l~~--~~~~~~~~~~~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~~ 81 (1230)
T 1u6g_C 4 ASYHISNLLEKMTSSDKDFRFMATNDLMTELQK--DSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKE 81 (1230)
T ss_dssp CCHHHHHHHHHTTCSSHHHHHHHHHHHHHHTSS--SCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCH
T ss_pred hHhHHHHHHHhcCCCCHhHHHHHHHHHHHHHcc--cccCCChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCH
Confidence 356788899999999998887554 44444332 22211 1 11112 233445556667777777777777777766
Q ss_pred ccccccchhhhHhhhhcCCC--cccchhhhhhhcccCChh--------hhhcchhhhhhhccc-cCCHHHHHHHHHHHHH
Q psy3914 353 LISCHKVLPQLINAFEYGEA--GASVLSPLFKIGQMLEHE--------DYQAKIVPCVVKLFG-SNDRATRSRLLLQLEH 421 (852)
Q Consensus 353 ~~~~~kiLP~Ll~~~e~~~~--~~~vL~~llki~~~l~~~--------ef~~~i~P~i~~LF~-~~dr~iR~~LL~~L~~ 421 (852)
. ....|++.|+..+..... ...+...+-.|+..+... .|...++|.+...+. +.+..+|...++.|..
T Consensus 82 ~-~~~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~~l~~ 160 (1230)
T 1u6g_C 82 Y-QVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMAD 160 (1230)
T ss_dssp H-HHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Confidence 3 334678888887754332 112223344455555543 477899999999998 5888888888887777
Q ss_pred HHccCChH--HHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhc
Q psy3914 422 FIGHVPDA--IVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVG 499 (852)
Q Consensus 422 ~~~~l~~~--~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclg 499 (852)
++...... ...+.+++.|+.++.|.++.||+++++++..++..++...+ ..+++.+......+.+..+|..++.||+
T Consensus 161 ~~~~~~~~l~~~~~~ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~~~~~-~~~l~~l~~~L~~~~~~~~r~~a~~~l~ 239 (1230)
T 1u6g_C 161 MLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVF-VDLIEHLLSELSKNDSMSTTRTYIQCIA 239 (1230)
T ss_dssp HHHHTCSSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC----C-TTHHHHHHHHHHHTCSSCSCTTHHHHHH
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcCHHHH-HHHHHHHHHHhccCCchhHHHHHHHHHH
Confidence 77543321 13478999999999999999999999999999998886653 4567766554434555789999999999
Q ss_pred ccccccChhhH--HHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCH--HHHHHhHhhhhhhccc
Q psy3914 500 KIAHHLHPQIR--QKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLL--SEVAQRILPALCQLST 562 (852)
Q Consensus 500 kia~~L~~~~~--~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~--~~~a~~ILP~L~~l~~ 562 (852)
.|+..+++... -..++|.+.+.+.|+...+|.+++.++..+...+.. ......|+|.+...+.
T Consensus 240 ~l~~~~~~~~~~~l~~l~~~ll~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~l~~li~~ll~~l~ 306 (1230)
T 1u6g_C 240 AISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLT 306 (1230)
T ss_dssp HHHHHSSGGGTTSCTTHHHHHHHHHSSCCTTTHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTTCCC
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHChHHHHHhHHHHHHHHHHHhC
Confidence 99988776432 245789999999999999999999999988887763 2356778888877663
|
| >2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.62 E-value=3.9e-07 Score=94.82 Aligned_cols=179 Identities=13% Similarity=0.177 Sum_probs=141.7
Q ss_pred hhhhhcchhhhhhhccc-cCCHHHHHHHHHHHHHHHccCChH--HHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccC
Q psy3914 389 HEDYQAKIVPCVVKLFG-SNDRATRSRLLLQLEHFIGHVPDA--IVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKL 465 (852)
Q Consensus 389 ~~ef~~~i~P~i~~LF~-~~dr~iR~~LL~~L~~~~~~l~~~--~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl 465 (852)
...| ..+++.+.+++. ..+..+|...+.-+..++..+.+. .....|+|.++..+.|.++.||+++..++..++..+
T Consensus 51 ~~~~-~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~ 129 (242)
T 2qk2_A 51 NGEY-GALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRFSNYASACVPSLLEKFKEKKPNVVTALREAIDAIYAST 129 (242)
T ss_dssp CCCC-HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTS
T ss_pred CCCH-HHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcC
Confidence 3445 578899999995 899999988899999888887654 244569999999999999999999999999998876
Q ss_pred CccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChh----hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHh
Q psy3914 466 NYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ----IRQKVLISAFSRAMRDPFPPARNAGVLALAATQ 541 (852)
Q Consensus 466 ~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~----~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~ 541 (852)
+. ..+++.+.... ++..+.||.+++.+|+.++...++. .....++|.+...+.|+...+|.+|+.++..+.
T Consensus 130 ~~----~~ll~~l~~~l-~~~~~~vr~~~l~~l~~~l~~~~~~~~~~~~l~~l~p~l~~~l~D~~~~VR~~A~~~l~~l~ 204 (242)
T 2qk2_A 130 SL----EAQQESIVESL-SNKNPSVKSETALFIARALTRTQPTALNKKLLKLLTTSLVKTLNEPDPTVRDSSAEALGTLI 204 (242)
T ss_dssp CH----HHHHHHHHHHT-TCSCHHHHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred CH----HHHHHHHHHHH-cCCChHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Confidence 52 45788887776 5889999999999999988776543 233478899999999999999999999999988
Q ss_pred hccCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhh
Q psy3914 542 QYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQ 585 (852)
Q Consensus 542 ~~~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~ 585 (852)
..++.+.+ -|.+-.+ .....+.|..++++.+-
T Consensus 205 ~~vg~~~~----~~~l~~L--------~~~~~~~i~~~~~~a~v 236 (242)
T 2qk2_A 205 KLMGDKAV----TPLLADV--------DPLKMAKIKECQEKAEI 236 (242)
T ss_dssp HHHCHHHH----GGGGTTS--------CHHHHHHHHHHHHHCCC
T ss_pred HHcCHHHH----HHHHHhc--------CHHHHHHHHHHHHHHHH
Confidence 88885433 3333322 34456677778777763
|
| >3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} | Back alignment and structure |
|---|
Probab=98.62 E-value=2.7e-07 Score=93.47 Aligned_cols=157 Identities=15% Similarity=0.172 Sum_probs=120.5
Q ss_pred chhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhH
Q psy3914 395 KIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVET 474 (852)
Q Consensus 395 ~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~l 474 (852)
..+|.|+.++..+|..+|...+..|..+.. ...+|.|...+.|.++.||..++..+-.+.. .+.
T Consensus 50 ~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~--------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~--------~~~ 113 (211)
T 3ltm_A 50 RAVEPLIKALKDEDAWVRRAAADALGQIGD--------ERAVEPLIKALKDEDGWVRQSAAVALGQIGD--------ERA 113 (211)
T ss_dssp GGHHHHHHHTTCSCHHHHHHHHHHHHHHCC--------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGG
T ss_pred cHHHHHHHHHcCCCHHHHHHHHHHHHhhCC--------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--------HHH
Confidence 567888888888999999888877776642 3567888888999999999999988876642 346
Q ss_pred HHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHh
Q psy3914 475 LRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRIL 554 (852)
Q Consensus 475 L~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~IL 554 (852)
++.|.++. .|+++.||..++.+||++.. ...++.+...++|+...+|.+++.+|..+.. ..++
T Consensus 114 ~~~L~~~l-~d~~~~vr~~a~~aL~~~~~--------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~--------~~~~ 176 (211)
T 3ltm_A 114 VEPLIKAL-KDEDWFVRIAAAFALGEIGD--------ERAVEPLIKALKDEDGWVRQSAADALGEIGG--------ERVR 176 (211)
T ss_dssp HHHHHHHT-TCSSHHHHHHHHHHHHHHCC--------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCS--------HHHH
T ss_pred HHHHHHHH-hCCCHHHHHHHHHHHHHcCC--------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--------hhHH
Confidence 67777766 68899999999999998854 2346677888899999999999988877643 5678
Q ss_pred hhhhhcccCCChhhHHHHHHHHHHHHHHHh
Q psy3914 555 PALCQLSTDPEKSVRDSAFKTIKGFLGKLE 584 (852)
Q Consensus 555 P~L~~l~~D~~~~Vr~~a~~~i~~~l~~le 584 (852)
|.|..++-|++..||..|..++..+-.+-.
T Consensus 177 ~~L~~~l~d~~~~vr~~A~~aL~~~~~~~~ 206 (211)
T 3ltm_A 177 AAMEKLAETGTGFARKVAVNYLETHKSFNH 206 (211)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHC------
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHhcCCCCC
Confidence 888888889999999999888877655443
|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* | Back alignment and structure |
|---|
Probab=98.62 E-value=2e-07 Score=114.73 Aligned_cols=254 Identities=11% Similarity=0.054 Sum_probs=179.0
Q ss_pred cCHHHHhHHHHhhhhhhccCCccccc--ccchhhhHhhhhcCC--CcccchhhhhhhcccCCh--hhhhcchhhhhhhcc
Q psy3914 331 KDKIDKNKFFNGLASAIDKFPKLISC--HKVLPQLINAFEYGE--AGASVLSPLFKIGQMLEH--EDYQAKIVPCVVKLF 404 (852)
Q Consensus 331 k~~~eK~~Ff~~L~~~l~~fP~~~~~--~kiLP~Ll~~~e~~~--~~~~vL~~llki~~~l~~--~ef~~~i~P~i~~LF 404 (852)
.+..-|..-++.|...+...+..+.. ..++|.|+..+...+ ....++..+-.+++..+. ..|...+++.+..++
T Consensus 186 ~~~~vR~~A~~aL~~~~~~~~~~~~~~~~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~~~~l~~l~~~l~~~~ 265 (852)
T 4fdd_A 186 SSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRT 265 (852)
T ss_dssp SSHHHHHHHHHHHHTTTTTTCHHHHTSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCHHHHGGGHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHc
Confidence 34455555566665555444433221 245666666554332 112233333344333322 134456888888999
Q ss_pred ccCCHHHHHHHHHHHHHHHccCCh-H---HHhHhHHHHHHhhc-----------CC-----------CcHHHHHHHHHHH
Q psy3914 405 GSNDRATRSRLLLQLEHFIGHVPD-A---IVNEQIFQQVALGF-----------LD-----------TNPTIREQTVKSI 458 (852)
Q Consensus 405 ~~~dr~iR~~LL~~L~~~~~~l~~-~---~v~~~I~P~l~~g~-----------~D-----------~~~~iRe~tlksi 458 (852)
...|..+|...++.+..+.++-.- + .....++|.++..+ .| .+..||..+...+
T Consensus 266 ~~~~~~vr~~a~e~l~~l~~~~~~~~~~~~~~~~l~p~ll~~l~~~e~d~~~~~~d~~ed~~~dd~~~~~~vr~~a~~~L 345 (852)
T 4fdd_A 266 QDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEGGSGGDDTISDWNLRKCSAAAL 345 (852)
T ss_dssp TCSSHHHHHHHHHHHHHHTTSTTHHHHHTTTHHHHHHHHHHHTSCCHHHHHHHHC------------CCCCHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHcCCcHhHHHHhcCCcccccccccccccchHHHHHHHHH
Confidence 999999999888888877764321 1 13447889998887 34 4567899999999
Q ss_pred HHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhh--HHHHHHHHHHhhccCCChHHHHHHHHH
Q psy3914 459 IHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQI--RQKVLISAFSRAMRDPFPPARNAGVLA 536 (852)
Q Consensus 459 ~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~--~~~vLi~af~r~lkDp~~~~R~a~l~~ 536 (852)
-.++..+.+. +-..+++.+..+. .|++|.+|..++.+||.|+...+... ....+++.+.+.++|+.+.+|.+++.+
T Consensus 346 ~~la~~~~~~-~~~~l~~~l~~~l-~~~~~~~R~aa~~alg~i~~~~~~~~~~~l~~~l~~l~~~l~d~~~~Vr~~a~~~ 423 (852)
T 4fdd_A 346 DVLANVYRDE-LLPHILPLLKELL-FHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWT 423 (852)
T ss_dssp HHHHHHHGGG-GHHHHHHHHHHHH-TCSSHHHHHHHHHHHHHTTTTTHHHHGGGHHHHHHHHHHHTTCSSHHHHHHHHHH
T ss_pred HHHHHhccHH-HHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 9999888754 4557888888776 58899999999999999999876543 234578888999999999999999999
Q ss_pred HHHHhhccC---HHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhhh
Q psy3914 537 LAATQQYFL---LSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQV 586 (852)
Q Consensus 537 l~~~~~~~~---~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~~ 586 (852)
+..+...+. .......++|.|...+.|++..||..|..+|..+.+.....
T Consensus 424 l~~l~~~~~~~~~~~~~~~ll~~L~~~L~d~~~~vr~~a~~aL~~l~~~~~~~ 476 (852)
T 4fdd_A 424 LSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTE 476 (852)
T ss_dssp HHHTHHHHHHSCTTTTHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhHh
Confidence 887666543 23455689999999999999999999999999998877643
|
| >2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A | Back alignment and structure |
|---|
Probab=98.58 E-value=4.3e-07 Score=110.96 Aligned_cols=254 Identities=13% Similarity=0.116 Sum_probs=175.6
Q ss_pred CHHHHhHHHHhhhhhhccCCccc-----ccccchhhhHhhhhcCCCcc----cchhhhhhhcc----cCChhhhhcchhh
Q psy3914 332 DKIDKNKFFNGLASAIDKFPKLI-----SCHKVLPQLINAFEYGEAGA----SVLSPLFKIGQ----MLEHEDYQAKIVP 398 (852)
Q Consensus 332 ~~~eK~~Ff~~L~~~l~~fP~~~-----~~~kiLP~Ll~~~e~~~~~~----~vL~~llki~~----~l~~~ef~~~i~P 398 (852)
+...+...+.-|......+++.+ ....++|.|+..+...+.-+ .++..+..+.. .+....+...+++
T Consensus 148 ~~~~r~~al~~l~~l~~~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~al~~l~~~~~~~~~~~~~~~~~~~ll~ 227 (861)
T 2bpt_A 148 PENVKRASLLALGYMCESADPQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQ 227 (861)
T ss_dssp CHHHHHHHHHHHHHHHHTSSTTSSTTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCChhhhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHccChhHHHHHHH
Confidence 44555555555555554444332 23345666666555432111 12222222211 2222223456888
Q ss_pred hhhhccccCCHHHHHHHHHHHHHHHccCCh---HHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc--------
Q psy3914 399 CVVKLFGSNDRATRSRLLLQLEHFIGHVPD---AIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNY-------- 467 (852)
Q Consensus 399 ~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~---~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~-------- 467 (852)
.+..++...+..+|...++.|..++...+. ..+...|++.+..++.|.++.||.+++..+..++....+
T Consensus 228 ~l~~~~~~~~~~~r~~a~~~l~~l~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~ 307 (861)
T 2bpt_A 228 VVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQF 307 (861)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHHHHHHGGGCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence 888888888999998888888777766543 223338899999999999999999999988877765311
Q ss_pred --------cc---hhhhHHHHHHHHhcc------CCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHH
Q psy3914 468 --------NN---LNVETLRHFARLQAK------DDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPAR 530 (852)
Q Consensus 468 --------~~---l~~~lL~~l~kl~~~------D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R 530 (852)
.. .-..++|.+...... |+++.+|..+..||+.++..++... ...+++.+...+.|+....|
T Consensus 308 ~~~~~~~~~~~~~~~~~il~~ll~~l~~~~~d~~d~~~~~r~~a~~~L~~l~~~~~~~~-~~~l~~~l~~~l~~~~~~~r 386 (861)
T 2bpt_A 308 PQSPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHI-LEPVLEFVEQNITADNWRNR 386 (861)
T ss_dssp TTCSCCCCCHHHHHHHHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHGGGG-HHHHHHHHHHHTTCSSHHHH
T ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHHHHccHhH-HHHHHHHHHHHcCCCChhHH
Confidence 11 124567776554422 3468999999999999999998554 34677888888999999999
Q ss_pred HHHHHHHHHHhhccCHH---HHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhhh
Q psy3914 531 NAGVLALAATQQYFLLS---EVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQV 586 (852)
Q Consensus 531 ~a~l~~l~~~~~~~~~~---~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~~ 586 (852)
.+++.++..+.+....+ .....++|.|...+.|++..||..+..++..+...+..+
T Consensus 387 ~~a~~~l~~i~~~~~~~~~~~~l~~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~ 445 (861)
T 2bpt_A 387 EAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAES 445 (861)
T ss_dssp HHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999888776633 345678999999999999999999999999988887653
|
| >3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} | Back alignment and structure |
|---|
Probab=98.56 E-value=6.5e-07 Score=90.64 Aligned_cols=153 Identities=18% Similarity=0.247 Sum_probs=127.2
Q ss_pred cchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhh
Q psy3914 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVE 473 (852)
Q Consensus 394 ~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~ 473 (852)
...+|.++.++.++++.+|...+..|..+.. ...+|.|+..+.|.++.||..++..+-.+.. .+
T Consensus 18 ~~~~~~L~~~L~~~~~~vR~~A~~~L~~~~~--------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~--------~~ 81 (211)
T 3ltm_A 18 PEKVEMYIKNLQDDSYYVRRAAAYALGKIGD--------ERAVEPLIKALKDEDAWVRRAAADALGQIGD--------ER 81 (211)
T ss_dssp GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGGHHHHHHHTTCSCHHHHHHHHHHHHHHCC--------GG
T ss_pred HhHHHHHHHHHcCCCHHHHHHHHHHHHHhCC--------ccHHHHHHHHHcCCCHHHHHHHHHHHHhhCC--------HH
Confidence 4567889999999999999988888877643 4678999999999999999999999887652 34
Q ss_pred HHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhH
Q psy3914 474 TLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRI 553 (852)
Q Consensus 474 lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~I 553 (852)
.++.|.++. +|+++.||..++.+|+++.. ...++.+...++|+.+.+|.+++.+|..+.. ...
T Consensus 82 ~~~~L~~~l-~~~~~~vr~~a~~aL~~~~~--------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~--------~~~ 144 (211)
T 3ltm_A 82 AVEPLIKAL-KDEDGWVRQSAAVALGQIGD--------ERAVEPLIKALKDEDWFVRIAAAFALGEIGD--------ERA 144 (211)
T ss_dssp GHHHHHHHT-TCSSHHHHHHHHHHHHHHCC--------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGG
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHHHHhCc--------HHHHHHHHHHHhCCCHHHHHHHHHHHHHcCC--------HHH
Confidence 567777775 69999999999999998864 2345778888999999999999999987643 357
Q ss_pred hhhhhhcccCCChhhHHHHHHHHHHH
Q psy3914 554 LPALCQLSTDPEKSVRDSAFKTIKGF 579 (852)
Q Consensus 554 LP~L~~l~~D~~~~Vr~~a~~~i~~~ 579 (852)
+|.|..++-|++..||..|..++..+
T Consensus 145 ~~~L~~~l~d~~~~vr~~a~~aL~~~ 170 (211)
T 3ltm_A 145 VEPLIKALKDEDGWVRQSAADALGEI 170 (211)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 89999999999999999998887765
|
| >2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A | Back alignment and structure |
|---|
Probab=98.56 E-value=8.4e-07 Score=99.82 Aligned_cols=228 Identities=13% Similarity=0.149 Sum_probs=166.9
Q ss_pred ccchhhhHhhhhcCCC---cccchhhhhhhcccC---ChhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCCh--
Q psy3914 357 HKVLPQLINAFEYGEA---GASVLSPLFKIGQML---EHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPD-- 428 (852)
Q Consensus 357 ~kiLP~Ll~~~e~~~~---~~~vL~~llki~~~l---~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~-- 428 (852)
..++|.|+..+..... ...++..+..++... ....+...++|.+++++...|..+|...+.-|..+....+.
T Consensus 148 ~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~ 227 (450)
T 2jdq_A 148 CNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKI 227 (450)
T ss_dssp TTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCGGGTGGGHHHHHHHTTCCCHHHHHHHHHHHHHHTSSSHHHH
T ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHCCCcHHH
Confidence 4577777777763211 112223333444322 12344578899999999999999988777777777654322
Q ss_pred -HHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCcc---chhhhHHHHHHHHhccCCCcceeeehhhhhcccccc
Q psy3914 429 -AIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYN---NLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHH 504 (852)
Q Consensus 429 -~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~---~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~ 504 (852)
..+...++|.|+..+.+.++.+|+.++..+-.|+..-+.. .+...+++.|..+. .++++.||..++.+|+.|+..
T Consensus 228 ~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll-~~~~~~vr~~a~~~L~~l~~~ 306 (450)
T 2jdq_A 228 QAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLL-SSPKESIKKEACWTISNITAG 306 (450)
T ss_dssp HHHHHTTTHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHT-TCSSHHHHHHHHHHHHHHTTS
T ss_pred HHHHHcCcHHHHHHHHCCCchhHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHHHHH-cCCCHHHHHHHHHHHHHHHcC
Confidence 3344578999999999999999999999999888653321 23345888888887 478899999999999999974
Q ss_pred cChh---hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHH----HHHhHhhhhhhcccCCChhhHHHHHHHHH
Q psy3914 505 LHPQ---IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSE----VAQRILPALCQLSTDPEKSVRDSAFKTIK 577 (852)
Q Consensus 505 L~~~---~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~----~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~ 577 (852)
-... ....-++|.+...++|+...+|.+++.++..+....+.+. +...++|.|+.++-+++..||..++.+|.
T Consensus 307 ~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~aL~ 386 (450)
T 2jdq_A 307 NRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLE 386 (450)
T ss_dssp CHHHHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGGSSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 2221 1223467889999999999999999999987766555432 34579999999999999999999999999
Q ss_pred HHHHHHhh
Q psy3914 578 GFLGKLEQ 585 (852)
Q Consensus 578 ~~l~~le~ 585 (852)
.++..-+.
T Consensus 387 ~l~~~~~~ 394 (450)
T 2jdq_A 387 NILRLGEQ 394 (450)
T ss_dssp HHHHHHHH
T ss_pred HHHHhchh
Confidence 88876554
|
| >1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A | Back alignment and structure |
|---|
Probab=98.55 E-value=1.1e-06 Score=107.50 Aligned_cols=194 Identities=16% Similarity=0.134 Sum_probs=151.1
Q ss_pred hhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCCh---HHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCC--
Q psy3914 392 YQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPD---AIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLN-- 466 (852)
Q Consensus 392 f~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~---~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~-- 466 (852)
+...+++.+..+....|..+|...++.|..++..... ..+...|+|.++.++.|.++.||.+++..+..++....
T Consensus 214 ~~~~il~~l~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~al~~l~~l~~~~~~~ 293 (876)
T 1qgr_A 214 ERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDL 293 (876)
T ss_dssp HHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhH
Confidence 3445888888888888889998888888888876553 23444899999999999999999999988877764320
Q ss_pred ------------------ccchh---hhHHHHHHHHhcc------CCCcceeeehhhhhcccccccChhhHHHHHHHHHH
Q psy3914 467 ------------------YNNLN---VETLRHFARLQAK------DDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFS 519 (852)
Q Consensus 467 ------------------~~~l~---~~lL~~l~kl~~~------D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~ 519 (852)
...++ ..+++.+...... |.+|.+|..+..||+.++..++... ...+++.+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~l~~~~~d~~~~~~~~r~~a~~~l~~l~~~~~~~~-~~~~l~~l~ 372 (876)
T 1qgr_A 294 AIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDI-VPHVLPFIK 372 (876)
T ss_dssp HHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHGGGG-HHHHHHHHH
T ss_pred hhhhccccccCCCccchhHHHHHHHHHHHhHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHCcHhh-HHHHHHHHH
Confidence 01111 4556665544321 4579999999999999999988554 446677888
Q ss_pred hhccCCChHHHHHHHHHHHHHhhccCHH---HHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhhh
Q psy3914 520 RAMRDPFPPARNAGVLALAATQQYFLLS---EVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQV 586 (852)
Q Consensus 520 r~lkDp~~~~R~a~l~~l~~~~~~~~~~---~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~~ 586 (852)
..+.|+...+|.+++.++..+...+..+ .....++|.|..++.|++..||..|+.++..|...+...
T Consensus 373 ~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~~~~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~ 442 (876)
T 1qgr_A 373 EHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEA 442 (876)
T ss_dssp HHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHccCCChHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCchh
Confidence 8899999999999999999888877633 345679999999999999999999999999999887653
|
| >2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A | Back alignment and structure |
|---|
Probab=98.54 E-value=3.3e-07 Score=111.99 Aligned_cols=252 Identities=14% Similarity=0.147 Sum_probs=174.8
Q ss_pred ccCHHHHhHHHHhhhhhhccCCcccccc---cchhhhHhhhhcCCC--cccchhhhhhhcccCC----------------
Q psy3914 330 MKDKIDKNKFFNGLASAIDKFPKLISCH---KVLPQLINAFEYGEA--GASVLSPLFKIGQMLE---------------- 388 (852)
Q Consensus 330 ~k~~~eK~~Ff~~L~~~l~~fP~~~~~~---kiLP~Ll~~~e~~~~--~~~vL~~llki~~~l~---------------- 388 (852)
-.+...|...++.|......+|..+..+ .+++.++..+...+. ...++..+-.++....
T Consensus 235 ~~~~~~r~~a~~~l~~l~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 314 (861)
T 2bpt_A 235 AEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQS 314 (861)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHGGGCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhh
Confidence 3456677777777777776666554332 555555555443221 1111111222222110
Q ss_pred ---hhhhhcchhhhhhhccccC-------CHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHH
Q psy3914 389 ---HEDYQAKIVPCVVKLFGSN-------DRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSI 458 (852)
Q Consensus 389 ---~~ef~~~i~P~i~~LF~~~-------dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi 458 (852)
...+...++|.++..+... +..+|....+.|..++..+. +.+...++|.+...+.+.++.+|++++..+
T Consensus 315 ~~~~~~~~~~il~~ll~~l~~~~~d~~d~~~~~r~~a~~~L~~l~~~~~-~~~~~~l~~~l~~~l~~~~~~~r~~a~~~l 393 (861)
T 2bpt_A 315 YNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCG-NHILEPVLEFVEQNITADNWRNREAAVMAF 393 (861)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHG-GGGHHHHHHHHHHHTTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHHHHcc-HhHHHHHHHHHHHHcCCCChhHHHHHHHHH
Confidence 0223467888888877643 24688888888888888777 445678999999999999999999999999
Q ss_pred HHhcccCCccchh---hhHHHHHHHHhccCCCcceeeehhhhhcccccccChh----hHHHHHHHHHHhhccCCChHHHH
Q psy3914 459 IHLAPKLNYNNLN---VETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ----IRQKVLISAFSRAMRDPFPPARN 531 (852)
Q Consensus 459 ~~l~~kl~~~~l~---~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~----~~~~vLi~af~r~lkDp~~~~R~ 531 (852)
-.++.......+. ..+++.+.+.. +|+.+.||..++.|||+++..+.+. .....+++++.+.++|+ +.+|.
T Consensus 394 ~~i~~~~~~~~~~~~l~~il~~l~~~l-~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~~l~~~-~~v~~ 471 (861)
T 2bpt_A 394 GSIMDGPDKVQRTYYVHQALPSILNLM-NDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDH-PKVAT 471 (861)
T ss_dssp HHTSSSSCHHHHHHHHHHHHHHHHHGG-GCSCHHHHHHHHHHHHHHHHHHGGGSCTTTTHHHHHHHHHHHHTSC-HHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHc-CCCcHHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHhccC-hHHHH
Confidence 9998766522222 34677777776 6999999999999999999887653 23556778888899998 88999
Q ss_pred HHHHHHHHHhhccC------HHHHHHhHhhhhhhccc--CCChhhHHHHHHHHHHHHHHHh
Q psy3914 532 AGVLALAATQQYFL------LSEVAQRILPALCQLST--DPEKSVRDSAFKTIKGFLGKLE 584 (852)
Q Consensus 532 a~l~~l~~~~~~~~------~~~~a~~ILP~L~~l~~--D~~~~Vr~~a~~~i~~~l~~le 584 (852)
+++.++..+.+.+. .......|+|.|..++. |.+.+||..++++|..++....
T Consensus 472 ~a~~al~~l~~~~~~~~~~~l~~~~~~il~~L~~~l~~~d~~~~vr~~a~~al~~l~~~~~ 532 (861)
T 2bpt_A 472 NCSWTIINLVEQLAEATPSPIYNFYPALVDGLIGAANRIDNEFNARASAFSALTTMVEYAT 532 (861)
T ss_dssp HHHHHHHHHHHHHSSSSSCGGGGGHHHHHHHHHHHHTCSCCGGGHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHhCcCcchHHHHHHHHHHHHHHHHcc
Confidence 99999887766543 22344677888888886 5557899999998888776554
|
| >3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} | Back alignment and structure |
|---|
Probab=98.53 E-value=7e-07 Score=89.69 Aligned_cols=150 Identities=15% Similarity=0.199 Sum_probs=62.9
Q ss_pred chhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhH
Q psy3914 395 KIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVET 474 (852)
Q Consensus 395 ~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~l 474 (852)
..+|.|+.++..++..+|...+..|..+.. ...+|.|...+.|.++.||..++.++-.+.. .+.
T Consensus 45 ~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~--------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~--------~~~ 108 (201)
T 3ltj_A 45 RAVEPLIKALKDEDAWVRRAAADALGQIGD--------ERAVEPLIKALKDEDGWVRQSAAVALGQIGD--------ERA 108 (201)
T ss_dssp GGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGG
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHhhCC--------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--------HHH
Confidence 344444444444444444444444333311 1233444444444444444444444443321 123
Q ss_pred HHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHh
Q psy3914 475 LRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRIL 554 (852)
Q Consensus 475 L~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~IL 554 (852)
++.+.++. .|+++.||..++.+||++.. ...++.+...++|+...+|.+++.+|..+.. ...+
T Consensus 109 ~~~L~~~l-~d~~~~vr~~a~~aL~~~~~--------~~~~~~L~~~l~d~~~~vr~~A~~aL~~~~~--------~~~~ 171 (201)
T 3ltj_A 109 VEPLIKAL-KDEDWFVRIAAAFALGEIGD--------ERAVEPLIKALKDEDGWVRQSAADALGEIGG--------ERVR 171 (201)
T ss_dssp HHHHHHHT-TCSSHHHHHHHHHHHHHHTC--------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCS--------HHHH
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHHHHhCC--------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--------hhHH
Confidence 33333333 34444444444444444432 1223344444444444444444444443311 2234
Q ss_pred hhhhhcccCCChhhHHHHHHHHH
Q psy3914 555 PALCQLSTDPEKSVRDSAFKTIK 577 (852)
Q Consensus 555 P~L~~l~~D~~~~Vr~~a~~~i~ 577 (852)
|.|..++-|++..||..|..++.
T Consensus 172 ~~L~~~l~d~~~~vr~~A~~aL~ 194 (201)
T 3ltj_A 172 AAMEKLAETGTGFARKVAVNYLE 194 (201)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHH
Confidence 44444444444444444444433
|
| >1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A | Back alignment and structure |
|---|
Probab=98.52 E-value=4.9e-07 Score=101.86 Aligned_cols=190 Identities=11% Similarity=0.057 Sum_probs=141.0
Q ss_pred cchhhhhhhccccC--CHHHHHHHHHHHHHHHccCChH---HHhHhHHHHHHhhcCCC--cHHHHHHHHHHHHHhcccCC
Q psy3914 394 AKIVPCVVKLFGSN--DRATRSRLLLQLEHFIGHVPDA---IVNEQIFQQVALGFLDT--NPTIREQTVKSIIHLAPKLN 466 (852)
Q Consensus 394 ~~i~P~i~~LF~~~--dr~iR~~LL~~L~~~~~~l~~~---~v~~~I~P~l~~g~~D~--~~~iRe~tlksi~~l~~kl~ 466 (852)
..++|.|+..+.+. +..+|...|.-|..+.+.+..+ ...+.|+|.+..++.|. ++.||.++++++..+++.+.
T Consensus 127 ~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~ 206 (462)
T 1ibr_B 127 PELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTK 206 (462)
T ss_dssp TTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTH
T ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCchhhHhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 56889999999888 8999988888888887766432 23457999999999998 79999999999998876654
Q ss_pred ccc----hhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhH--HH-HHHHHHHhhccCCChHHHHHHHHHHHH
Q psy3914 467 YNN----LNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIR--QK-VLISAFSRAMRDPFPPARNAGVLALAA 539 (852)
Q Consensus 467 ~~~----l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~--~~-vLi~af~r~lkDp~~~~R~a~l~~l~~ 539 (852)
... ....+++.+..+. .|.+..||..++.||+.++........ -. .+++.+...++|....+|..++..+..
T Consensus 207 ~~~~~~~~~~~l~~~l~~~~-~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~a~~~l~~ 285 (462)
T 1ibr_B 207 ANFDKESERHFIMQVVCEAT-QCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSN 285 (462)
T ss_dssp HHHTSHHHHHHHHHHHHHHT-TCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred HhhhhhHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 221 2234677777665 588899999999999999876543211 12 567777788899999999999887765
Q ss_pred Hhhcc----------------------C-HHHHHHhHhhhhhhcccC-------CChhhHHHHHHHHHHHHHHHh
Q psy3914 540 TQQYF----------------------L-LSEVAQRILPALCQLSTD-------PEKSVRDSAFKTIKGFLGKLE 584 (852)
Q Consensus 540 ~~~~~----------------------~-~~~~a~~ILP~L~~l~~D-------~~~~Vr~~a~~~i~~~l~~le 584 (852)
+.+.- . .+.....++|.|..++.+ .+..+|..|..++..+...+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~l~~~l~~~d~d~~~~~~~~r~~a~~~L~~l~~~~~ 360 (462)
T 1ibr_B 286 VCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCE 360 (462)
T ss_dssp HHHHHHHHHHHHCCTTCSSSCSSCCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcccccccCCCccchhHHHHHHHhhhccHHHHHHHHhcccccccccchHHHHHHHHHHHHHHhcc
Confidence 54331 1 112346788888777753 356899999998888877665
|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A | Back alignment and structure |
|---|
Probab=98.50 E-value=1.9e-06 Score=110.16 Aligned_cols=196 Identities=10% Similarity=0.175 Sum_probs=153.7
Q ss_pred hhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCCh---------------------HHHhHhHHHHHHhhcCCCcH
Q psy3914 390 EDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPD---------------------AIVNEQIFQQVALGFLDTNP 448 (852)
Q Consensus 390 ~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~---------------------~~v~~~I~P~l~~g~~D~~~ 448 (852)
..|...++|.++..|..++..+|...++.|..++..+.. ..+...|+|.+...+.|.++
T Consensus 369 ~~~~~~l~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~l~~~~~ 448 (1230)
T 1u6g_C 369 PEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSV 448 (1230)
T ss_dssp HHHHTTTHHHHHSTTSCSSSHHHHHHHHHHHHHHHHHCCC------------CCCHHHHHHHHTTHHHHHHHHHTTCSCH
T ss_pred HHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhccccccccCccccccccchHHHHHHHhhHHHHHHHHHhccCCH
Confidence 567788899999999888999998888888877765432 23456678888888999999
Q ss_pred HHHHHHHHHHHHhcccCCcc--chhhhHHHHHHHHhccCCCc--ceeeehhhhhcccccccChhh---HHHHHHHHHHhh
Q psy3914 449 TIREQTVKSIIHLAPKLNYN--NLNVETLRHFARLQAKDDQG--GIRTNTTVCVGKIAHHLHPQI---RQKVLISAFSRA 521 (852)
Q Consensus 449 ~iRe~tlksi~~l~~kl~~~--~l~~~lL~~l~kl~~~D~~~--~IR~nt~iclgkia~~L~~~~---~~~vLi~af~r~ 521 (852)
.+|+.++..+-.++..+... ..-..+++.+..+. +|... .||..++-+++.+...++++. .-..++|.+...
T Consensus 449 ~vr~~~~~~L~~l~~~~~~~l~~~l~~ll~~l~~~L-~d~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~l~~llp~L~~~ 527 (1230)
T 1u6g_C 449 KTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSL-NDKSSSSNLKIDALSCLYVILCNHSPQVFHPHVQALVPPVVAC 527 (1230)
T ss_dssp HHHHHHHHHHHHHHHHSTTTTGGGHHHHHHHHHHHT-TCSSSCHHHHHHHHHHHHHHHHSSCGGGGHHHHTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHchhhhHHHHHHHHHHHHHHH-cCCCCcchHHHHHHHHHHHHHHhCCHHHHHhHHHHHHHHHHHH
Confidence 99999988888777664321 11256777777776 57765 899999999999988777763 234578888889
Q ss_pred ccCCChHHHHHHHHHHHHHhhccCH---------HHHHHhHhhhhhhcc--cCCChhhHHHHHHHHHHHHHHHhhh
Q psy3914 522 MRDPFPPARNAGVLALAATQQYFLL---------SEVAQRILPALCQLS--TDPEKSVRDSAFKTIKGFLGKLEQV 586 (852)
Q Consensus 522 lkDp~~~~R~a~l~~l~~~~~~~~~---------~~~a~~ILP~L~~l~--~D~~~~Vr~~a~~~i~~~l~~le~~ 586 (852)
+.|+...+|..++.++..+.+.++. ......|+|.|...+ .|.+..||+.|..++..++......
T Consensus 528 l~d~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~ll~~ll~~l~~~d~~~~vr~~a~~~lg~L~~~~g~~ 603 (1230)
T 1u6g_C 528 VGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICNLGDN 603 (1230)
T ss_dssp HTCSSHHHHHHHHHHHHHHHHHHCCSSSCCCCCCHHHHHHHHHHHHHHHSCSSSCHHHHHHHHHHHHHHHHHTGGG
T ss_pred HcccchHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhCch
Confidence 9999999998898888877766543 356788999999888 7888999999999999998887654
|
| >4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} | Back alignment and structure |
|---|
Probab=98.49 E-value=8.3e-07 Score=91.43 Aligned_cols=189 Identities=13% Similarity=0.118 Sum_probs=145.3
Q ss_pred cchhhhhhhccccCCHHHHHHHHHHHHHHHccC---ChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc---
Q psy3914 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHV---PDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNY--- 467 (852)
Q Consensus 394 ~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l---~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~--- 467 (852)
..++|.+++++.+.+..+|...+.-|..+...- ....+...++|.|+..+.+.++.+|+.++..+-.++..-..
T Consensus 43 ~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~ 122 (252)
T 4hxt_A 43 AGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIK 122 (252)
T ss_dssp TTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred CCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 457899999999999999887777777766442 22334456899999999999999999999999998853221
Q ss_pred cchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHH----HHHHHHHHhhccCCChHHHHHHHHHHHHHhhc
Q psy3914 468 NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQ----KVLISAFSRAMRDPFPPARNAGVLALAATQQY 543 (852)
Q Consensus 468 ~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~----~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~ 543 (852)
..+....++.+.++. .+.++.||.+++-||+.|+..- +..+. .-.++.+...++++...+|..++.+|..+...
T Consensus 123 ~~~~~~~i~~L~~~l-~~~~~~~~~~a~~~L~~l~~~~-~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~ 200 (252)
T 4hxt_A 123 AIVDAGGVEVLVKLL-TSTDSEVQKEAARALANIASGP-DEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASG 200 (252)
T ss_dssp HHHHTTHHHHHHHHT-TCSCHHHHHHHHHHHHHHTTSC-HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTS
T ss_pred HHHHCCCHHHHHHHH-cCCCHHHHHHHHHHHHHHHcCC-HHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcC
Confidence 223345688888887 5888999999999999998763 22222 33688999999999999999999998876652
Q ss_pred cC---HHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHh
Q psy3914 544 FL---LSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLE 584 (852)
Q Consensus 544 ~~---~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le 584 (852)
-. ...+...++|.|..++.+++..||..|..++..+...-.
T Consensus 201 ~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~ 244 (252)
T 4hxt_A 201 PTSAIKAIVDAGGVEVLQKLLTSTDSEVQKEAQRALENIKSGGW 244 (252)
T ss_dssp BHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHTCB
T ss_pred CHHHHHHHHHCCCHHHHHHHHCCCcHHHHHHHHHHHHHHHcCCC
Confidence 21 112345689999999999999999999999988876443
|
| >3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} | Back alignment and structure |
|---|
Probab=98.49 E-value=6.9e-07 Score=89.73 Aligned_cols=155 Identities=17% Similarity=0.241 Sum_probs=126.9
Q ss_pred hhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchh
Q psy3914 392 YQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLN 471 (852)
Q Consensus 392 f~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~ 471 (852)
|.....|.++.++.++|+.+|...+..|..+.. ...+|.|+..+.|.++.||..++..+-.+..
T Consensus 11 ~~~~~~~~~i~~L~~~~~~vr~~A~~~L~~~~~--------~~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~-------- 74 (201)
T 3ltj_A 11 TDPEKVEMYIKNLQDDSYYVRRAAAYALGKIGD--------ERAVEPLIKALKDEDAWVRRAAADALGQIGD-------- 74 (201)
T ss_dssp CCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHCC--------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------
T ss_pred cCCcchHHHHHHhcCCCHHHHHHHHHHHHhcCC--------hhHHHHHHHHHcCCCHHHHHHHHHHHHhhCC--------
Confidence 455677889999999999999988888876643 3568889999999999999999998877642
Q ss_pred hhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHH
Q psy3914 472 VETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQ 551 (852)
Q Consensus 472 ~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~ 551 (852)
.+.++.|.++. .|+++.||..++.+|+++.. ...++.+...++|+.+.+|.+++.++..+.. .
T Consensus 75 ~~~~~~L~~~l-~d~~~~vr~~a~~aL~~~~~--------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~--------~ 137 (201)
T 3ltj_A 75 ERAVEPLIKAL-KDEDGWVRQSAAVALGQIGD--------ERAVEPLIKALKDEDWFVRIAAAFALGEIGD--------E 137 (201)
T ss_dssp GGGHHHHHHHT-TCSSHHHHHHHHHHHHHHCC--------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHTC--------G
T ss_pred HHHHHHHHHHH-cCCCHHHHHHHHHHHHHhCc--------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCC--------H
Confidence 24567777766 58999999999999998764 2356677888999999999999999987653 4
Q ss_pred hHhhhhhhcccCCChhhHHHHHHHHHHH
Q psy3914 552 RILPALCQLSTDPEKSVRDSAFKTIKGF 579 (852)
Q Consensus 552 ~ILP~L~~l~~D~~~~Vr~~a~~~i~~~ 579 (852)
..+|.|..++-|++..||..|..++..+
T Consensus 138 ~~~~~L~~~l~d~~~~vr~~A~~aL~~~ 165 (201)
T 3ltj_A 138 RAVEPLIKALKDEDGWVRQSAADALGEI 165 (201)
T ss_dssp GGHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 6788999999999999999888877654
|
| >1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A | Back alignment and structure |
|---|
Probab=98.47 E-value=9.5e-07 Score=108.13 Aligned_cols=249 Identities=11% Similarity=0.061 Sum_probs=172.8
Q ss_pred HHHHhHHHHhhhhhhccCCcccc----cccchhhhHhhhhcCCC--cccchhhhhhhcccCCh--hhhhc-chhhhhhhc
Q psy3914 333 KIDKNKFFNGLASAIDKFPKLIS----CHKVLPQLINAFEYGEA--GASVLSPLFKIGQMLEH--EDYQA-KIVPCVVKL 403 (852)
Q Consensus 333 ~~eK~~Ff~~L~~~l~~fP~~~~----~~kiLP~Ll~~~e~~~~--~~~vL~~llki~~~l~~--~ef~~-~i~P~i~~L 403 (852)
...+..-++.|...+..++..+. ...+++.|...+...+. ...++..+-.+...... ..|.. .++|.+...
T Consensus 188 ~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~ 267 (876)
T 1qgr_A 188 NNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEA 267 (876)
T ss_dssp HHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 45566666766665554443322 12356666554432221 11222333333322221 22334 788888888
Q ss_pred cccCCHHHHHHHHHHHHHHHccC--------------------ChHH---HhHhHHHHHHhhcC-------CCcHHHHHH
Q psy3914 404 FGSNDRATRSRLLLQLEHFIGHV--------------------PDAI---VNEQIFQQVALGFL-------DTNPTIREQ 453 (852)
Q Consensus 404 F~~~dr~iR~~LL~~L~~~~~~l--------------------~~~~---v~~~I~P~l~~g~~-------D~~~~iRe~ 453 (852)
+...+..+|...++.+..+++.. .... ....|+|.++..+. |.++.+|..
T Consensus 268 ~~~~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~l~~~~~d~~~~~~~~r~~ 347 (876)
T 1qgr_A 268 MKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKA 347 (876)
T ss_dssp HTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCCHHHH
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHhHhhhhccccccCCCccchhHHHHHHHHHHHhHHHHHHhhcccccccccccHHHHH
Confidence 88888888877776665555431 0011 22678888887774 456799999
Q ss_pred HHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhh---HHHHHHHHHHhhccCCChHHH
Q psy3914 454 TVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQI---RQKVLISAFSRAMRDPFPPAR 530 (852)
Q Consensus 454 tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~---~~~vLi~af~r~lkDp~~~~R 530 (852)
++..+..++..+.+.. -..+++++.... .|++|.+|..++.+||.|+..+.++. ....++|.+.+.++|+.+.+|
T Consensus 348 a~~~l~~l~~~~~~~~-~~~~l~~l~~~l-~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~~~~~l~~l~~~l~d~~~~vr 425 (876)
T 1qgr_A 348 AGVCLMLLATCCEDDI-VPHVLPFIKEHI-KNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVR 425 (876)
T ss_dssp HHHHHHHHHHHHGGGG-HHHHHHHHHHHT-TCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHTCSSHHHH
T ss_pred HHHHHHHHHHHCcHhh-HHHHHHHHHHHc-cCCChHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999988887544 457888887776 58999999999999999999888542 234478888999999999999
Q ss_pred HHHHHHHHHHhhccCH----HHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHh
Q psy3914 531 NAGVLALAATQQYFLL----SEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLE 584 (852)
Q Consensus 531 ~a~l~~l~~~~~~~~~----~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le 584 (852)
.+++.++..+...+.. ......+||.|..++.|+ ..||..+..+|..++...+
T Consensus 426 ~~a~~~l~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~-~~v~~~a~~al~~l~~~~~ 482 (876)
T 1qgr_A 426 DTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAE-PRVASNVCWAFSSLAEAAY 482 (876)
T ss_dssp HHHHHHHHHHHHHCGGGTSSTTTHHHHHHHHHHHTTSC-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCchhcccHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHhh
Confidence 9999999887776543 345678999999999886 8899999999999988776
|
| >2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A | Back alignment and structure |
|---|
Probab=98.45 E-value=2.7e-06 Score=95.60 Aligned_cols=248 Identities=13% Similarity=0.103 Sum_probs=170.8
Q ss_pred cCHHHHhHHHHhhhhhhc--cCC--cccccc-cchhhhHhhhhcCCCc---ccchhhhhhhcccCCh---hhhhcchhhh
Q psy3914 331 KDKIDKNKFFNGLASAID--KFP--KLISCH-KVLPQLINAFEYGEAG---ASVLSPLFKIGQMLEH---EDYQAKIVPC 399 (852)
Q Consensus 331 k~~~eK~~Ff~~L~~~l~--~fP--~~~~~~-kiLP~Ll~~~e~~~~~---~~vL~~llki~~~l~~---~ef~~~i~P~ 399 (852)
.+...+..-+..|.+.+. .-| ..+... .++|.|+..+...... ..++..+-.++..-+. .-....++|.
T Consensus 32 ~~~~~r~~A~~~L~~l~~~~~~~~~~~~~~~~~~i~~L~~~L~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~ 111 (450)
T 2jdq_A 32 KSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPI 111 (450)
T ss_dssp SCHHHHHHHHHHHHHHHHSSSSCCHHHHHTSTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHH
T ss_pred CCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCcHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCHHH
Confidence 344445555555555432 111 112233 6888888877665211 1122222333321111 1123568999
Q ss_pred hhhccccCCHHHHHHHHHHHHHHHccCC---hHHHhHhHHHHHHhhcCC-CcHHHHHHHHHHHHHhcc----cCCccchh
Q psy3914 400 VVKLFGSNDRATRSRLLLQLEHFIGHVP---DAIVNEQIFQQVALGFLD-TNPTIREQTVKSIIHLAP----KLNYNNLN 471 (852)
Q Consensus 400 i~~LF~~~dr~iR~~LL~~L~~~~~~l~---~~~v~~~I~P~l~~g~~D-~~~~iRe~tlksi~~l~~----kl~~~~l~ 471 (852)
++.++.+.+..+|...+.-|..+...-+ ...+...++|.|+..+.+ .++.+|+.++..+-.|+. ...... .
T Consensus 112 L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~-~ 190 (450)
T 2jdq_A 112 FIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAK-V 190 (450)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCGGG-T
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCHHH-H
Confidence 9999999999999888887777776432 223455789999999995 789999999999999984 333333 3
Q ss_pred hhHHHHHHHHhccCCCcceeeehhhhhcccccccChh---hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHH-
Q psy3914 472 VETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ---IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLS- 547 (852)
Q Consensus 472 ~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~---~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~- 547 (852)
..+++.|.++. .+.+..||.+++.+|+.|+..-... ....-+++.+...++++...+|..++.+|..+....+..
T Consensus 191 ~~~l~~L~~~l-~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~ 269 (450)
T 2jdq_A 191 SPCLNVLSWLL-FVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQT 269 (450)
T ss_dssp GGGHHHHHHHT-TCCCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTTHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred HHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHCCCcHHHHHHHHcCcHHHHHHHHCCCchhHHHHHHHHHHHHhhCChHHH
Confidence 67889998887 4778899999999999998764321 222346888999999999999999999998776543321
Q ss_pred --HHHHhHhhhhhhcccCCChhhHHHHHHHHHHHH
Q psy3914 548 --EVAQRILPALCQLSTDPEKSVRDSAFKTIKGFL 580 (852)
Q Consensus 548 --~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l 580 (852)
.+...++|.|..++.+++..||..|..+|..+.
T Consensus 270 ~~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~l~ 304 (450)
T 2jdq_A 270 QVILNCSALQSLLHLLSSPKESIKKEACWTISNIT 304 (450)
T ss_dssp HHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHCccHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 123469999999999999999999998887775
|
| >4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A | Back alignment and structure |
|---|
Probab=98.44 E-value=1e-06 Score=88.76 Aligned_cols=188 Identities=14% Similarity=0.138 Sum_probs=143.0
Q ss_pred hhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCC---hHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc-
Q psy3914 392 YQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVP---DAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNY- 467 (852)
Q Consensus 392 f~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~---~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~- 467 (852)
+.....|.+.+|+.+.|..+|...+..|..+...-+ ...+...++|.|+..+.+.++.+|+.++..+-.|+..-..
T Consensus 9 ~~~~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~ 88 (210)
T 4db6_A 9 HHGSELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQ 88 (210)
T ss_dssp ----CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHH
T ss_pred cccchhHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHH
Confidence 345667899999999999999888888877764432 2345557899999999999999999999999988743221
Q ss_pred --cchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChh---hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhh
Q psy3914 468 --NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ---IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQ 542 (852)
Q Consensus 468 --~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~---~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~ 542 (852)
..++...++.|..+. .+.+..||.+++.+|+.|+..-... ....-+++.+.+.++++...+|..++.+|..+..
T Consensus 89 ~~~i~~~g~i~~L~~lL-~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~ 167 (210)
T 4db6_A 89 IQAVIDAGALPALVQLL-SSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIAS 167 (210)
T ss_dssp HHHHHHTTCHHHHHHHT-TCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCHHHHHHHH-cCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHc
Confidence 223345688888887 5788999999999999999743221 1233468899999999999999999999987765
Q ss_pred ccCH---HHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHH
Q psy3914 543 YFLL---SEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFL 580 (852)
Q Consensus 543 ~~~~---~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l 580 (852)
.... ..+...++|.|..++.+++..||..|..++..+.
T Consensus 168 ~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~aL~~l~ 208 (210)
T 4db6_A 168 GGNEQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALEKLQ 208 (210)
T ss_dssp SCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHC
T ss_pred CCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHh
Confidence 4321 1234468999999999999999999999887663
|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A | Back alignment and structure |
|---|
Probab=98.43 E-value=1.3e-06 Score=101.29 Aligned_cols=228 Identities=12% Similarity=0.127 Sum_probs=167.3
Q ss_pred cccchhhhHhhhhcCC--CcccchhhhhhhcccC---ChhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCC---
Q psy3914 356 CHKVLPQLINAFEYGE--AGASVLSPLFKIGQML---EHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVP--- 427 (852)
Q Consensus 356 ~~kiLP~Ll~~~e~~~--~~~~vL~~llki~~~l---~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~--- 427 (852)
...++|.|+..+.... ....++..+..++..- ....+...++|.|+.++...|..+|...+.-|..+...-+
T Consensus 213 ~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~~~~~ 292 (530)
T 1wa5_B 213 QCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAI 292 (530)
T ss_dssp HTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHH
T ss_pred HcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHH
Confidence 3457777777766522 1111222333343221 2234557889999999999999999888887777776533
Q ss_pred hHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc---cchhhhHHHHHHHHhccCCCcceeeehhhhhcccccc
Q psy3914 428 DAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNY---NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHH 504 (852)
Q Consensus 428 ~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~---~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~ 504 (852)
...+...++|.|+..+.+.++.||+.++..+-.|+..-+. ..++..+++.|..+. .+..+.||..++.+|+.|+..
T Consensus 293 ~~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~lL-~~~~~~vr~~A~~aL~~l~~~ 371 (530)
T 1wa5_B 293 QAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLL-SSPKENIKKEACWTISNITAG 371 (530)
T ss_dssp HHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHT-TCSCHHHHHHHHHHHHHHTTS
T ss_pred HHHHhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHHHHHHcchHHHHHHHH-cCCCHHHHHHHHHHHHHHHcC
Confidence 2234457899999999999999999999999988854322 223456788888887 477899999999999999974
Q ss_pred cChhhHH----HHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCH--H----HHHHhHhhhhhhcccCCChhhHHHHHH
Q psy3914 505 LHPQIRQ----KVLISAFSRAMRDPFPPARNAGVLALAATQQYFLL--S----EVAQRILPALCQLSTDPEKSVRDSAFK 574 (852)
Q Consensus 505 L~~~~~~----~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~--~----~~a~~ILP~L~~l~~D~~~~Vr~~a~~ 574 (852)
- +..++ .-+++.+...|+++...+|.+++.+|..+....+. + .+...++|.|+.++.+++..||..+..
T Consensus 372 ~-~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~l~~~~~l~~L~~ll~~~~~~v~~~al~ 450 (530)
T 1wa5_B 372 N-TEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLD 450 (530)
T ss_dssp C-HHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHHHHHHHH
T ss_pred C-HHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHH
Confidence 3 22222 33578889999999999999999999877665443 2 244569999999999999999999999
Q ss_pred HHHHHHHHHhh
Q psy3914 575 TIKGFLGKLEQ 585 (852)
Q Consensus 575 ~i~~~l~~le~ 585 (852)
+|..++..-+.
T Consensus 451 aL~~l~~~~~~ 461 (530)
T 1wa5_B 451 ALENILKMGEA 461 (530)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhhhh
Confidence 99999877665
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.43 E-value=3.3e-07 Score=101.15 Aligned_cols=131 Identities=6% Similarity=-0.005 Sum_probs=95.4
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEe--CC---CchHHHHHHHHHHHhCC--CCCcceEeeeEEcCCC-CeEEEEEeecc-
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLND--SA---DTYEPALSYVKKLKTLR--HPSILTFLDSVESPSK-SLVYLAVEYVE- 142 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~--~~---~~~~~~~~E~~~Lk~Lr--HPnIlk~~d~~e~~~~-~~~yIVtE~v~- 142 (852)
.|.+..+|..... +..+++|+.. .. .....+.+|+.+++.|+ +..+.+++..+.+... +..|+||||+.
T Consensus 48 ~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G 125 (359)
T 3dxp_A 48 GGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSG 125 (359)
T ss_dssp C-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCC
T ss_pred CcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCC
Confidence 6777889988763 4678888776 31 22346788999999997 4567888888765411 34889999998
Q ss_pred -cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHh------------------------------------------
Q psy3914 143 -PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLIN------------------------------------------ 179 (852)
Q Consensus 143 -~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~------------------------------------------ 179 (852)
++.+.. -..++......++.+++..|..||.
T Consensus 126 ~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (359)
T 3dxp_A 126 RVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDS 199 (359)
T ss_dssp BCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHH
T ss_pred eecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHH
Confidence 342211 1346777888889999999999994
Q ss_pred ---------------cCCceecccCCCCEEEccCCc--EEEcccchhh
Q psy3914 180 ---------------DADLRHNHVNHTSIFINSCGE--WKLGGLEYME 210 (852)
Q Consensus 180 ---------------~~~ivH~DIkp~NIlV~~~g~--~KL~DFg~a~ 210 (852)
...++|||+++.||+++.++. +.|+||+.+.
T Consensus 200 ~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~ 247 (359)
T 3dxp_A 200 LMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELST 247 (359)
T ss_dssp HHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCE
T ss_pred HHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccc
Confidence 146899999999999998764 6899999875
|
| >2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.9e-06 Score=90.53 Aligned_cols=185 Identities=11% Similarity=0.100 Sum_probs=145.0
Q ss_pred hhccccCCHHHHHHHHHHHHH-HHccCCh----HHHhHhHHHHHHhhc-CCCcHHHHHHHHHHHHHhcccCC-ccc---h
Q psy3914 401 VKLFGSNDRATRSRLLLQLEH-FIGHVPD----AIVNEQIFQQVALGF-LDTNPTIREQTVKSIIHLAPKLN-YNN---L 470 (852)
Q Consensus 401 ~~LF~~~dr~iR~~LL~~L~~-~~~~l~~----~~v~~~I~P~l~~g~-~D~~~~iRe~tlksi~~l~~kl~-~~~---l 470 (852)
...+.+.+...|...|+.|.. ++...+. ..--..++..|..++ .|.+..||..+++.+-.++..|. ... .
T Consensus 22 ~~~l~s~~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~f~~~y 101 (249)
T 2qk1_A 22 QERITSSKWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKTPGFSKDY 101 (249)
T ss_dssp HHHHTCSSHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTTSCHHH
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhcccccccHHH
Confidence 344578999999999999998 8754221 111147789999999 79999999999999999998776 332 2
Q ss_pred hhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhH---HHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCH-
Q psy3914 471 NVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIR---QKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLL- 546 (852)
Q Consensus 471 ~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~---~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~- 546 (852)
-..+||.+.... +|....||.....|+-.|+.++++... -..|++.+...++.+.+.+|.+++..|..+.+....
T Consensus 102 ~~~llp~ll~~l-~dkk~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~~~~ 180 (249)
T 2qk1_A 102 VSLVFTPLLDRT-KEKKPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDILEHMKHKTPQIRMECTQLFNASMKEEKDG 180 (249)
T ss_dssp HHHHHHHHHHGG-GCCCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHccccccCCcHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCc
Confidence 345677766555 698899999999999999999865321 235666677778888899999999999888776652
Q ss_pred -H---HHH-HhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhhh
Q psy3914 547 -S---EVA-QRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQV 586 (852)
Q Consensus 547 -~---~~a-~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~~ 586 (852)
. ... ..|+|.|..++.|.+..||.+|++++..+...+.+.
T Consensus 181 ~~~l~~~l~~~iip~l~~~l~D~~~~VR~aA~~~l~~i~~~vG~~ 225 (249)
T 2qk1_A 181 YSTLQRYLKDEVVPIVIQIVNDTQPAIRTIGFESFAILIKIFGMN 225 (249)
T ss_dssp SHHHHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCSG
T ss_pred chhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCHH
Confidence 2 244 689999999999999999999999999998888754
|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 | Back alignment and structure |
|---|
Probab=98.33 E-value=2.9e-06 Score=89.74 Aligned_cols=163 Identities=14% Similarity=0.176 Sum_probs=67.5
Q ss_pred hhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHH-hhcCCCcHHHHHHHHHHHHHhcccCCccchhhhH
Q psy3914 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVA-LGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVET 474 (852)
Q Consensus 396 i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~-~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~l 474 (852)
++|.++.++.+++..+|...+.-|..+.. ... ....+++.|. ..+.|.++.||..++.++-.+..... .....+
T Consensus 55 ~~~~L~~~l~d~~~~vR~~A~~aL~~l~~--~~~-~~~~l~~~L~~~~~~d~~~~vr~~a~~aL~~l~~~~~--~~~~~~ 129 (280)
T 1oyz_A 55 AVRLAIEFCSDKNYIRRDIGAFILGQIKI--CKK-CEDNVFNILNNMALNDKSACVRATAIESTAQRCKKNP--IYSPKI 129 (280)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHSCC--CTT-THHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCG--GGHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhcc--ccc-cchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhccCC--cccHHH
Confidence 44444444444444444444443333211 001 1112333333 23344444555554444444332211 112334
Q ss_pred HHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHh
Q psy3914 475 LRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRIL 554 (852)
Q Consensus 475 L~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~IL 554 (852)
++.+.++. +|+++.||..++.+||++... ..++.+...++|+...+|.+++.++..+... ...++
T Consensus 130 ~~~L~~~l-~d~~~~vR~~a~~aL~~~~~~--------~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~------~~~~~ 194 (280)
T 1oyz_A 130 VEQSQITA-FDKSTNVRRATAFAISVINDK--------ATIPLLINLLKDPNGDVRNWAAFAININKYD------NSDIR 194 (280)
T ss_dssp HHHHHHHT-TCSCHHHHHHHHHHHHTC-----------CCHHHHHHHHTCSSHHHHHHHHHHHHHHTCC------CHHHH
T ss_pred HHHHHHHh-hCCCHHHHHHHHHHHHhcCCH--------HHHHHHHHHHcCCCHHHHHHHHHHHHhhccC------cHHHH
Confidence 44444443 344455555555555544321 1334444445555555555555554333100 12344
Q ss_pred hhhhhcccCCChhhHHHHHHHHHH
Q psy3914 555 PALCQLSTDPEKSVRDSAFKTIKG 578 (852)
Q Consensus 555 P~L~~l~~D~~~~Vr~~a~~~i~~ 578 (852)
|.|..++-|++..||..|..++..
T Consensus 195 ~~L~~~l~d~~~~vR~~A~~aL~~ 218 (280)
T 1oyz_A 195 DCFVEMLQDKNEEVRIEAIIGLSY 218 (280)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHH
Confidence 555555555555555555544433
|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A | Back alignment and structure |
|---|
Probab=98.31 E-value=5e-06 Score=96.47 Aligned_cols=247 Identities=12% Similarity=0.143 Sum_probs=170.6
Q ss_pred CHHHHhHHHHhhhhhhccC--C--cccccccchhhhHhhhhcCCCc---ccchhhhhhhcccCCh---hhhhcchhhhhh
Q psy3914 332 DKIDKNKFFNGLASAIDKF--P--KLISCHKVLPQLINAFEYGEAG---ASVLSPLFKIGQMLEH---EDYQAKIVPCVV 401 (852)
Q Consensus 332 ~~~eK~~Ff~~L~~~l~~f--P--~~~~~~kiLP~Ll~~~e~~~~~---~~vL~~llki~~~l~~---~ef~~~i~P~i~ 401 (852)
+...+..-...|...+... | ..+....++|.|+..+...... ..++..+-.|+..-+. .-...-++|.++
T Consensus 100 ~~~~~~~A~~~L~~ll~~~~~~~~~~~~~~g~i~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv 179 (530)
T 1wa5_B 100 DMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFI 179 (530)
T ss_dssp SHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCCccHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHH
Confidence 3444444445555444332 1 1234456889998887665211 1122233333332111 112245789999
Q ss_pred hccccCCHHHHHHHHHHHHHHHccC---ChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhccc----CCccchhhhH
Q psy3914 402 KLFGSNDRATRSRLLLQLEHFIGHV---PDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPK----LNYNNLNVET 474 (852)
Q Consensus 402 ~LF~~~dr~iR~~LL~~L~~~~~~l---~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~k----l~~~~l~~~l 474 (852)
.++.+.+..+|...+.-|..+...- ....+...++|.|+..+.+.++.+|..++..+..|+.. .. ..+...+
T Consensus 180 ~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~-~~~~~~~ 258 (530)
T 1wa5_B 180 QLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPD-WSVVSQA 258 (530)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCC-HHHHGGG
T ss_pred HHHcCCCHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHhH
Confidence 9999999999988777777776542 22335567899999999999999999999999999843 32 2234568
Q ss_pred HHHHHHHhccCCCcceeeehhhhhcccccccChh---hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccC---HHH
Q psy3914 475 LRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ---IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFL---LSE 548 (852)
Q Consensus 475 L~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~---~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~---~~~ 548 (852)
++.|.++. .+.+..||.+++.||+.|+..-... ....-+++.+...++++...+|..++.+|..+....+ ...
T Consensus 259 l~~L~~lL-~~~d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 337 (530)
T 1wa5_B 259 LPTLAKLI-YSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVV 337 (530)
T ss_dssp HHHHHHHT-TCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHHHH
Confidence 89998887 5778999999999999999753321 2222457889999999999999999999877664332 122
Q ss_pred HHHhHhhhhhhcccCCChhhHHHHHHHHHHHH
Q psy3914 549 VAQRILPALCQLSTDPEKSVRDSAFKTIKGFL 580 (852)
Q Consensus 549 ~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l 580 (852)
+...++|.|..++.+++..||..|..+|..+.
T Consensus 338 ~~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l~ 369 (530)
T 1wa5_B 338 INAGVLPALRLLLSSPKENIKKEACWTISNIT 369 (530)
T ss_dssp HHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHT
T ss_pred HHcchHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 44579999999999999999999988887765
|
| >4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} | Back alignment and structure |
|---|
Probab=98.25 E-value=5.2e-06 Score=85.38 Aligned_cols=184 Identities=14% Similarity=0.141 Sum_probs=143.6
Q ss_pred hhhhhhhccccCCHHHHHHHHHHHHHHHccCC---hHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCC---ccc
Q psy3914 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVP---DAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLN---YNN 469 (852)
Q Consensus 396 i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~---~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~---~~~ 469 (852)
.+|.++.+..+.+..+|...+..|..+...-+ ...+...++|.|+..+.+.++.+|+.++..+-.|+..-. ...
T Consensus 3 ~i~~L~~~L~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 82 (252)
T 4hxt_A 3 DVEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAI 82 (252)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred cHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 46888999999999999888888887776543 233455789999999999999999999999998875421 122
Q ss_pred hhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhH----HHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccC
Q psy3914 470 LNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIR----QKVLISAFSRAMRDPFPPARNAGVLALAATQQYFL 545 (852)
Q Consensus 470 l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~----~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~ 545 (852)
+....++.+.++. .+++..||.+++.+|+.|+..- +..+ ..-.++.+.+.++++...+|..++.+|..+.....
T Consensus 83 ~~~~~i~~l~~ll-~~~~~~v~~~a~~~L~~l~~~~-~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~ 160 (252)
T 4hxt_A 83 VDAGGVEVLVKLL-TSTDSEVQKEAARALANIASGP-DEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPD 160 (252)
T ss_dssp HHTTHHHHHHHHT-TCSSHHHHHHHHHHHHHHTTSC-HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCH
T ss_pred HHCCCHHHHHHHH-cCCCHHHHHHHHHHHHHHHcCC-HHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCH
Confidence 2345688888887 5888999999999999999642 2222 22357889999999999999999999887765432
Q ss_pred H---HHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHH
Q psy3914 546 L---SEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLG 581 (852)
Q Consensus 546 ~---~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~ 581 (852)
. ..+...++|.|..++.+++..||..|..++..+..
T Consensus 161 ~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~ 199 (252)
T 4hxt_A 161 EAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIAS 199 (252)
T ss_dssp HHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHc
Confidence 1 23446799999999999999999999998888764
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.24 E-value=6.1e-07 Score=96.65 Aligned_cols=182 Identities=11% Similarity=0.028 Sum_probs=109.0
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCC-CCC--cceEeeeEEcCC-CCeEEEEEeecc--cHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLR-HPS--ILTFLDSVESPS-KSLVYLAVEYVE--PIF 145 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~Lr-HPn--Ilk~~d~~e~~~-~~~~yIVtE~v~--~L~ 145 (852)
.|....+|+.. ..+++|+.........+.+|+..|+.|. +.. +.+++....... ....|+|||++. +|.
T Consensus 30 ~G~~n~v~~v~-----~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~ 104 (304)
T 3sg8_A 30 EGNDCIAYEIN-----RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLT 104 (304)
T ss_dssp ECSSEEEEEST-----TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECC
T ss_pred CCCcceEEEEC-----CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECC
Confidence 67777888763 4688888664333567899999998884 332 445554443321 124589999998 554
Q ss_pred HHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHh----------------------------------------------
Q psy3914 146 YHLDNTLKENNEKKQIYISWGIFQITRALSFLIN---------------------------------------------- 179 (852)
Q Consensus 146 ~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~---------------------------------------------- 179 (852)
.... ..++..+...++.|++..|..||.
T Consensus 105 ~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (304)
T 3sg8_A 105 PLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYR 178 (304)
T ss_dssp HHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred cccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHH
Confidence 3221 235566666677777777777773
Q ss_pred -----------cCCceecccCCCCEEEcc--CCcEEEcccchhhccccccC--CCCcc---cc-c----ccCCCcccC-C
Q psy3914 180 -----------DADLRHNHVNHTSIFINS--CGEWKLGGLEYMEKISEASC--IPMKR---YS-R----YEDQSTYQI-P 235 (852)
Q Consensus 180 -----------~~~ivH~DIkp~NIlV~~--~g~~KL~DFg~a~~~~~~~~--~~~~~---~~-~----~~gt~~Y~A-P 235 (852)
...++|||++|.||+++. .+.+.|+||+.+..-....+ ..... .. . +.....+.. |
T Consensus 179 ~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~ 258 (304)
T 3sg8_A 179 DILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIP 258 (304)
T ss_dssp HHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHH
T ss_pred HHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcH
Confidence 023799999999999998 45688999999753211000 00000 00 0 000000011 1
Q ss_pred ccccCCCCCcchhHHhHHHHHHHHHhCCCCC
Q psy3914 236 ENSLSHVTKCSTDMYGLGILIWEVFNGPLQS 266 (852)
Q Consensus 236 E~~~~~~~~~~sDIwSLG~ll~el~tG~~pf 266 (852)
+.... .....+.|++|.++|.+.+|..+|
T Consensus 259 ~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 259 TVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 21100 012368999999999999998766
|
| >4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} | Back alignment and structure |
|---|
Probab=98.23 E-value=6.1e-06 Score=85.43 Aligned_cols=185 Identities=15% Similarity=0.161 Sum_probs=141.1
Q ss_pred cchhhhhhhccccCCHHHHHHHHHHHHHHHccCC---hHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCcc--
Q psy3914 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVP---DAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYN-- 468 (852)
Q Consensus 394 ~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~---~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~-- 468 (852)
..++|.+++++...+..+|...+.-|..+...-+ ...+...++|.|+..+.+.++.+|+.++..+-.|+..-..+
T Consensus 53 ~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 132 (252)
T 4db8_A 53 AGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ 132 (252)
T ss_dssp TTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred cCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHH
Confidence 4578889999988888888777777766665322 33344568999999999999999999999999887654332
Q ss_pred -chhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChh---hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhcc
Q psy3914 469 -NLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ---IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYF 544 (852)
Q Consensus 469 -~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~---~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~ 544 (852)
.+....++.|.++. .+.++.||.+++-+|+.|+..-... ....-+++.+.+.++++...+|..++.+|..+...-
T Consensus 133 ~~~~~~~i~~L~~lL-~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~ 211 (252)
T 4db8_A 133 AVIDAGALPALVQLL-SSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGG 211 (252)
T ss_dssp HHHHTTHHHHHHHGG-GCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSC
T ss_pred HHHHCCCHHHHHHHH-hCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCC
Confidence 33445788888887 5888999999999999999753221 122345789999999999999999999988766322
Q ss_pred C--H-HHHHHhHhhhhhhcccCCChhhHHHHHHHHHHH
Q psy3914 545 L--L-SEVAQRILPALCQLSTDPEKSVRDSAFKTIKGF 579 (852)
Q Consensus 545 ~--~-~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~ 579 (852)
. . ..+...++|.|..++.+.+..||..|..+|..+
T Consensus 212 ~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~A~~~L~~l 249 (252)
T 4db8_A 212 NEQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALEKL 249 (252)
T ss_dssp HHHHHHHHHTTHHHHHHTTTTCSSSHHHHTHHHHHHTT
T ss_pred HHHHHHHHHCCcHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 1 1 123456899999999999999999998888654
|
| >4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A | Back alignment and structure |
|---|
Probab=98.22 E-value=1.2e-05 Score=93.10 Aligned_cols=248 Identities=14% Similarity=0.157 Sum_probs=168.9
Q ss_pred cCHHHHhHHHHhhhhhhccCC----cccccccchhhhHhhhhcCCCcc---cchhhhhhhcccCChhhh-----hcchhh
Q psy3914 331 KDKIDKNKFFNGLASAIDKFP----KLISCHKVLPQLINAFEYGEAGA---SVLSPLFKIGQMLEHEDY-----QAKIVP 398 (852)
Q Consensus 331 k~~~eK~~Ff~~L~~~l~~fP----~~~~~~kiLP~Ll~~~e~~~~~~---~vL~~llki~~~l~~~ef-----~~~i~P 398 (852)
.+...+..-...|...+...+ ..+....++|.|+..+...+... .++-.+-.|+..- .++ ..-++|
T Consensus 86 ~~~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~--~~~~~~~~~~g~i~ 163 (528)
T 4b8j_A 86 DDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGT--SENTKVVIDHGAVP 163 (528)
T ss_dssp SCHHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSC--HHHHHHHHHTTHHH
T ss_pred CCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCC--HHHHHHHHhCCcHH
Confidence 344444444444544433222 23445678999988887654211 1222333343321 222 235789
Q ss_pred hhhhccccCCHHHHHHHHHHHHHHHccCC---hHHHhHhHHHHHHhhc-CCCcHHHHHHHHHHHHHhcccCCc--cchhh
Q psy3914 399 CVVKLFGSNDRATRSRLLLQLEHFIGHVP---DAIVNEQIFQQVALGF-LDTNPTIREQTVKSIIHLAPKLNY--NNLNV 472 (852)
Q Consensus 399 ~i~~LF~~~dr~iR~~LL~~L~~~~~~l~---~~~v~~~I~P~l~~g~-~D~~~~iRe~tlksi~~l~~kl~~--~~l~~ 472 (852)
.++.++.+++..+|...+.-|..+...-+ ...+...++|.|+..+ .+.++.+|..++..+..|+..-.. ..+..
T Consensus 164 ~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~ 243 (528)
T 4b8j_A 164 IFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTR 243 (528)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCCHHHHT
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCcHHHHH
Confidence 99999999999998776666666654322 2334446789999999 678999999999999998865322 22335
Q ss_pred hHHHHHHHHhccCCCcceeeehhhhhcccccccChh---hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccC---H
Q psy3914 473 ETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ---IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFL---L 546 (852)
Q Consensus 473 ~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~---~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~---~ 546 (852)
.+++.|.++. .+.++.||.+++.+|+.|+..-+.. ....-+++.+...|+++...+|..++.+|..+..... .
T Consensus 244 ~~l~~L~~lL-~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~ 322 (528)
T 4b8j_A 244 PALPALARLI-HSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQ 322 (528)
T ss_dssp THHHHHHHHT-TCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHH-CCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCCHHHHH
Confidence 6789998887 5888999999999999999764321 1222357899999999999999999999877654322 1
Q ss_pred HHHHHhHhhhhhhcccCC-ChhhHHHHHHHHHHHHH
Q psy3914 547 SEVAQRILPALCQLSTDP-EKSVRDSAFKTIKGFLG 581 (852)
Q Consensus 547 ~~~a~~ILP~L~~l~~D~-~~~Vr~~a~~~i~~~l~ 581 (852)
..+...++|.|..++.++ +..||..|..+|..+..
T Consensus 323 ~~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~ 358 (528)
T 4b8j_A 323 CIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITA 358 (528)
T ss_dssp HHHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHC
Confidence 123356899999999999 89999999888887763
|
| >4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A | Back alignment and structure |
|---|
Probab=98.19 E-value=1.8e-05 Score=91.61 Aligned_cols=227 Identities=12% Similarity=0.152 Sum_probs=165.9
Q ss_pred ccchhhhHhhhhcCCC---cccchhhhhhhccc--CChhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCCh---
Q psy3914 357 HKVLPQLINAFEYGEA---GASVLSPLFKIGQM--LEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPD--- 428 (852)
Q Consensus 357 ~kiLP~Ll~~~e~~~~---~~~vL~~llki~~~--l~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~--- 428 (852)
..++|.|+..+..... ...++..+..++.. .........++|.|++++...|..++...+.-|..+...-+.
T Consensus 201 ~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~ 280 (528)
T 4b8j_A 201 NGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQ 280 (528)
T ss_dssp TTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHTSSCHHHHH
T ss_pred CCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 3467777776632211 11122233334333 223345577899999999999999998888888877765442
Q ss_pred HHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc---cchhhhHHHHHHHHhccCC-Ccceeeehhhhhcccccc
Q psy3914 429 AIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNY---NNLNVETLRHFARLQAKDD-QGGIRTNTTVCVGKIAHH 504 (852)
Q Consensus 429 ~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~---~~l~~~lL~~l~kl~~~D~-~~~IR~nt~iclgkia~~ 504 (852)
..+...++|.|+..+.+.++.||+.++..+-.|+..-.. ..++..+++.|..+.. +. ...||..++.+|+.|+..
T Consensus 281 ~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l~~L~~lL~-~~~~~~v~~~A~~~L~nl~~~ 359 (528)
T 4b8j_A 281 AVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLT-QNLKKSIKKEACWTISNITAG 359 (528)
T ss_dssp HHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHTS
T ss_pred HHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCCHHHHHHHHHhhhHHHHHHHHc-CCCcHHHHHHHHHHHHHHHCC
Confidence 234557899999999999999999999999988763222 2334567888888874 66 899999999999999874
Q ss_pred cChhhHH----HHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHH----HHHhHhhhhhhcccCCChhhHHHHHHHH
Q psy3914 505 LHPQIRQ----KVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSE----VAQRILPALCQLSTDPEKSVRDSAFKTI 576 (852)
Q Consensus 505 L~~~~~~----~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~----~a~~ILP~L~~l~~D~~~~Vr~~a~~~i 576 (852)
+..... .-++|.+...|+++...+|..++.+|..+...-+.+. +...++|.|+.++.+++..|+..++.+|
T Consensus 360 -~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~~l~~~~~i~~L~~lL~~~d~~v~~~al~~L 438 (528)
T 4b8j_A 360 -NKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTVCLEGL 438 (528)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHH
Confidence 333222 2357888999998889999999999887666544433 2357899999999999999999999999
Q ss_pred HHHHHHHhh
Q psy3914 577 KGFLGKLEQ 585 (852)
Q Consensus 577 ~~~l~~le~ 585 (852)
..++..-+.
T Consensus 439 ~~l~~~~~~ 447 (528)
T 4b8j_A 439 ENILKVGET 447 (528)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999887765
|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 | Back alignment and structure |
|---|
Probab=98.12 E-value=9.2e-06 Score=85.85 Aligned_cols=195 Identities=15% Similarity=0.199 Sum_probs=133.2
Q ss_pred ccchhhhHhhhhcCCCcccchhhhhhhcccCChhhhhcchhhhhhh-ccccCCHHHHHHHHHHHHHHHccCChHHHhHhH
Q psy3914 357 HKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAKIVPCVVK-LFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQI 435 (852)
Q Consensus 357 ~kiLP~Ll~~~e~~~~~~~vL~~llki~~~l~~~ef~~~i~P~i~~-LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I 435 (852)
...+|.|+..+...+.. .-...+..++..-...+....+++.+.. +...++..+|...+.-|..+....+ .....+
T Consensus 53 ~~~~~~L~~~l~d~~~~-vR~~A~~aL~~l~~~~~~~~~l~~~L~~~~~~d~~~~vr~~a~~aL~~l~~~~~--~~~~~~ 129 (280)
T 1oyz_A 53 QDAVRLAIEFCSDKNYI-RRDIGAFILGQIKICKKCEDNVFNILNNMALNDKSACVRATAIESTAQRCKKNP--IYSPKI 129 (280)
T ss_dssp HHHHHHHHHHHTCSSHH-HHHHHHHHHHHSCCCTTTHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCG--GGHHHH
T ss_pred chHHHHHHHHHcCCCHH-HHHHHHHHHHHhccccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhccCC--cccHHH
Confidence 35788888877654321 1111223333333233333345555543 3467888899888888877754432 235678
Q ss_pred HHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHH
Q psy3914 436 FQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLI 515 (852)
Q Consensus 436 ~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi 515 (852)
+|.|...+.|.++.||..++.++-.+.. .+.++.|.++. +|+++.||..++..||++... ....+
T Consensus 130 ~~~L~~~l~d~~~~vR~~a~~aL~~~~~--------~~~~~~L~~~l-~d~~~~vr~~a~~aL~~~~~~------~~~~~ 194 (280)
T 1oyz_A 130 VEQSQITAFDKSTNVRRATAFAISVIND--------KATIPLLINLL-KDPNGDVRNWAAFAININKYD------NSDIR 194 (280)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHTC-----------CCHHHHHHHH-TCSSHHHHHHHHHHHHHHTCC------CHHHH
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHhcCC--------HHHHHHHHHHH-cCCCHHHHHHHHHHHHhhccC------cHHHH
Confidence 8999999999999999999988875542 23567777765 588899999999999887422 23456
Q ss_pred HHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHH
Q psy3914 516 SAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGF 579 (852)
Q Consensus 516 ~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~ 579 (852)
+.+...++|+...+|..++.+|.... ...++|.|..++.|++ ||..|..++..+
T Consensus 195 ~~L~~~l~d~~~~vR~~A~~aL~~~~--------~~~~~~~L~~~l~d~~--vr~~a~~aL~~i 248 (280)
T 1oyz_A 195 DCFVEMLQDKNEEVRIEAIIGLSYRK--------DKRVLSVLCDELKKNT--VYDDIIEAAGEL 248 (280)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHTT--------CGGGHHHHHHHHTSSS--CCHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHhC--------CHhhHHHHHHHhcCcc--HHHHHHHHHHhc
Confidence 77888899999999999999887665 2467888888888866 888887776554
|
| >4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} | Back alignment and structure |
|---|
Probab=98.12 E-value=8.1e-06 Score=84.49 Aligned_cols=185 Identities=14% Similarity=0.166 Sum_probs=141.6
Q ss_pred chhhhhhhccccCCHHHHHHHHHHHHHHHccC---ChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc---c
Q psy3914 395 KIVPCVVKLFGSNDRATRSRLLLQLEHFIGHV---PDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNY---N 468 (852)
Q Consensus 395 ~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l---~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~---~ 468 (852)
..+|.++++..+.|..+|...+..|..++..- -...+...++|.|+..+.+.++.+|+.++..+-.++..-.+ .
T Consensus 12 ~~~~~~~~~L~s~~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 91 (252)
T 4db8_A 12 SELPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA 91 (252)
T ss_dssp CSHHHHHHHHHSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred chHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 34678888888999988887777775554441 12345567889999999999999999999999988853222 2
Q ss_pred chhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChh---hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccC
Q psy3914 469 NLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ---IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFL 545 (852)
Q Consensus 469 ~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~---~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~ 545 (852)
.+....++.|.++. +++++.||.+++-+|+.|+..-... ....-.++.+.+.++++...+|..++.+|..+.....
T Consensus 92 i~~~g~i~~L~~lL-~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~ 170 (252)
T 4db8_A 92 VIDAGALPALVQLL-SSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN 170 (252)
T ss_dssp HHHTTHHHHHHHGG-GCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCH
T ss_pred HHHcCCHHHHHHHH-cCCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCh
Confidence 22344688888887 5788999999999999998754322 2233468899999999999999999999987765432
Q ss_pred HH---HHHHhHhhhhhhcccCCChhhHHHHHHHHHHHH
Q psy3914 546 LS---EVAQRILPALCQLSTDPEKSVRDSAFKTIKGFL 580 (852)
Q Consensus 546 ~~---~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l 580 (852)
.. .+...++|.|..++.+++..||..|..++..+.
T Consensus 171 ~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~ 208 (252)
T 4db8_A 171 EQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIA 208 (252)
T ss_dssp HHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHh
Confidence 21 234678999999999999999999999988876
|
| >2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B | Back alignment and structure |
|---|
Probab=98.03 E-value=4.5e-05 Score=90.02 Aligned_cols=181 Identities=15% Similarity=0.090 Sum_probs=121.4
Q ss_pred hhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccc
Q psy3914 390 EDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNN 469 (852)
Q Consensus 390 ~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~ 469 (852)
.|..-.+++.+.+.+.++++.+|...|..|..+ ....+...++|.+..++.|.++.||..++.++..++.+-. ..
T Consensus 81 ~e~~~l~~n~l~kdL~~~n~~ir~~AL~~L~~i----~~~~~~~~l~~~l~~~L~d~~~~VRk~A~~al~~i~~~~p-~~ 155 (591)
T 2vgl_B 81 PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCI----RVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINA-QM 155 (591)
T ss_dssp HHHHHTTHHHHGGGSSSSSHHHHHHHHHHHHTC----CSGGGHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSC-CC
T ss_pred chHHHHHHHHHHHHcCCCCHHHHHHHHHHHHcC----ChHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhhCh-hh
Confidence 455556677788888888888887776665544 2444666788888888888888888888888888887443 33
Q ss_pred hh-hhHHHHHHHHhccCCCcceeeehhhhhcccccccChh---hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccC
Q psy3914 470 LN-VETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ---IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFL 545 (852)
Q Consensus 470 l~-~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~---~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~ 545 (852)
+. ..+++.+..+. .|+++.||.+++.+|++|+..-... ......+..+.+.+.|+.+-.++..+..+ ..+..
T Consensus 156 ~~~~~~~~~l~~lL-~d~d~~V~~~A~~aL~~i~~~~~~~~~~~l~~~~~~~Ll~~l~~~~~~~q~~il~~l---~~l~~ 231 (591)
T 2vgl_B 156 VEDQGFLDSLRDLI-ADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCL---SNYNP 231 (591)
T ss_dssp HHHHHHHHHHHHTT-SCSCHHHHHHHHHHHHHHTTSCCSCCSCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH---HTSCC
T ss_pred cccccHHHHHHHHh-CCCChhHHHHHHHHHHHHHhhCCCccchhccHHHHHHHHHcCCCCCchHHHHHHHHH---HHhCC
Confidence 33 35778888877 5888888888888888888774321 00011122233334454444555444433 22222
Q ss_pred -HHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHH
Q psy3914 546 -LSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGF 579 (852)
Q Consensus 546 -~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~ 579 (852)
....+..+++.|.+++-+.+..|+-+|.++|..+
T Consensus 232 ~~~~~~~~~l~~l~~~l~~~~~~V~~ea~~~i~~l 266 (591)
T 2vgl_B 232 KDDREAQSICERVTPRLSHANSAVVLSAVKVLMKF 266 (591)
T ss_dssp CSHHHHHHHHHHHTTCSCSSTTHHHHHHHHHHHHS
T ss_pred CChHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 2345678999999999999999999888877664
|
| >3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B | Back alignment and structure |
|---|
Probab=98.01 E-value=2.6e-05 Score=90.68 Aligned_cols=195 Identities=14% Similarity=0.183 Sum_probs=151.4
Q ss_pred hhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCCh---HHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc
Q psy3914 391 DYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPD---AIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNY 467 (852)
Q Consensus 391 ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~---~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~ 467 (852)
.....++|.|++|..+.+..++...+.-|..+...-+. ..+...++|.|+..+.+.++.|+..+++.+-.|+..-+.
T Consensus 247 ~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~~ 326 (529)
T 3tpo_A 247 DAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDE 326 (529)
T ss_dssp HHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHhhHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhhhhhHHHHHhccchHHHHHHhcCCChhHHHHHHHHHHHHHccchH
Confidence 34467899999999999999987777777766665432 245567899999999999999999999999888743222
Q ss_pred ---cchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccCh---hhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHh
Q psy3914 468 ---NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHP---QIRQKVLISAFSRAMRDPFPPARNAGVLALAATQ 541 (852)
Q Consensus 468 ---~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~---~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~ 541 (852)
..++...++.|..+. .++...||..++-+|+.|+..-.. .....-++|.+...++++...+|..|+.+|..+.
T Consensus 327 ~~~~i~~~g~l~~L~~LL-~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~ 405 (529)
T 3tpo_A 327 QTQKVIDAGALAVFPSLL-TNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYT 405 (529)
T ss_dssp HHHHHHHTTGGGGHHHHT-TCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccHHHHHHHH-cCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 234455788888887 588899999999999999875222 1233346888999999999999999999988766
Q ss_pred hccCHHH----HHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhhh
Q psy3914 542 QYFLLSE----VAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQV 586 (852)
Q Consensus 542 ~~~~~~~----~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~~ 586 (852)
...+.+. +-.-+||.|+.|+-.++..++..+..+|..++..-++.
T Consensus 406 ~~~~~~~~~~l~~~g~i~~L~~LL~~~d~~i~~~~L~aL~nil~~~~~~ 454 (529)
T 3tpo_A 406 SGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKL 454 (529)
T ss_dssp HHSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCHHHHHHHHHCcCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhc
Confidence 6556553 34568999999999999999999988888888765543
|
| >2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.94 E-value=1.2e-05 Score=84.49 Aligned_cols=159 Identities=12% Similarity=0.133 Sum_probs=123.2
Q ss_pred cCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHH-hcc---cCC--ccchhhhHHHHHHHHhccCCCcceeeehhhhh
Q psy3914 425 HVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIH-LAP---KLN--YNNLNVETLRHFARLQAKDDQGGIRTNTTVCV 498 (852)
Q Consensus 425 ~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~-l~~---kl~--~~~l~~~lL~~l~kl~~~D~~~~IR~nt~icl 498 (852)
.+++.+|.++|=+.+...+.+.++.-|.+++..+.. ++. ++. ... -.+++..|.+...+|.+..||..++.||
T Consensus 7 ~~~~~~i~~kl~~~f~~~l~s~~w~eRk~al~~L~~~~~~~~~~i~~~~~~-~~~~~~~L~~~l~~D~n~~v~~~A~~al 85 (249)
T 2qk1_A 7 MLPEETILDKLPKDFQERITSSKWKDRVEALEEFWDSVLSQTKKLKSTSQN-YSNLLGIYGHIIQKDANIQAVALAAQSV 85 (249)
T ss_dssp CCCCBCCGGGSCTTHHHHHTCSSHHHHHHHHHHHHHHTGGGCCCBCCTTCC-CHHHHHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred hcChhhhhhhCChhHHHHhhcCCHHHHHHHHHHHHHHHHhcCCccccCccc-HHHHHHHHHHHhccCCCHHHHHHHHHHH
Confidence 345555666666667778899999999999999988 763 443 222 1567888888876799999999999999
Q ss_pred cccccccC-hh---hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHH---HHhHhhhhhhcccCCChhhHHH
Q psy3914 499 GKIAHHLH-PQ---IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEV---AQRILPALCQLSTDPEKSVRDS 571 (852)
Q Consensus 499 gkia~~L~-~~---~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~---a~~ILP~L~~l~~D~~~~Vr~~ 571 (852)
|.|+..|. +. .-...++|++...++|....+|.++..++.++.+..++..+ -..+|+.|...+-.+++.||.+
T Consensus 86 ~~la~~l~~~~f~~~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l~~~l~~k~~~vk~~ 165 (249)
T 2qk1_A 86 ELICDKLKTPGFSKDYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDILEHMKHKTPQIRME 165 (249)
T ss_dssp HHHHHHHCTTTSCHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHHHHTTCSSHHHHHH
T ss_pred HHHHHhcccccccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccccccCCcHHHHHHHHHHHHcCCChHHHHH
Confidence 99999998 54 23456788888889999999999999999888887742111 1246777777788889999999
Q ss_pred HHHHHHHHHHHHh
Q psy3914 572 AFKTIKGFLGKLE 584 (852)
Q Consensus 572 a~~~i~~~l~~le 584 (852)
++..|..++..-+
T Consensus 166 al~~l~~~~~~~~ 178 (249)
T 2qk1_A 166 CTQLFNASMKEEK 178 (249)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcC
Confidence 9999988887654
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=7.3e-05 Score=78.43 Aligned_cols=126 Identities=9% Similarity=-0.026 Sum_probs=87.2
Q ss_pred CceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCC-CCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHh
Q psy3914 74 TFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLR-HPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDN 150 (852)
Q Consensus 74 s~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~ 150 (852)
+...||+.....++..+.+|+... .....+.+|...|+.|. +--|.+++.++++. +..|+|||++. ++.+....
T Consensus 37 S~~~v~rl~~~~~~~~~~lk~~~~-~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~--~~~~lvme~l~G~~~~~~~~~ 113 (272)
T 4gkh_A 37 SGATIYRLYGKPNAPELFLKHGKG-SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTP--DDAWLLTTAIPGKTAFQVLEE 113 (272)
T ss_dssp SSCEEEEEECCTTCCCEEEEEEET-HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEET--TEEEEEEECCCSEEHHHHHHH
T ss_pred cCCeEEEEEecCCCeEEEEEECCC-CCHhHHHHHHHHHHHhccCCCcCeEEEEEEEC--CeEEEEEEeeCCccccccccC
Confidence 335789888777788899998775 33456788999998885 33477888888887 88999999998 55554321
Q ss_pred hhhcCCCCCHHHHHHHHHHHHHHHHHHHh--------------------------------------------------c
Q psy3914 151 TLKENNEKKQIYISWGIFQITRALSFLIN--------------------------------------------------D 180 (852)
Q Consensus 151 ~~~~~~~l~e~~i~~~l~QI~~aL~fLH~--------------------------------------------------~ 180 (852)
.. .....+..++...|.-||. .
T Consensus 114 ~~--------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 185 (272)
T 4gkh_A 114 YP--------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHK 185 (272)
T ss_dssp CG--------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHT
T ss_pred CH--------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHh
Confidence 10 0112233344444444441 1
Q ss_pred -------CCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 181 -------ADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 181 -------~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
..++|||+++.||+++..+..-|+||+.+.
T Consensus 186 ~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 186 LLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp TCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 027899999999999987777799999974
|
| >2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00033 Score=82.54 Aligned_cols=189 Identities=11% Similarity=0.139 Sum_probs=139.8
Q ss_pred hhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHh-HhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc
Q psy3914 389 HEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVN-EQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNY 467 (852)
Q Consensus 389 ~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~-~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~ 467 (852)
..+....++|.|.++...+++.+|-.....+..+...-+ +.+. ..++|.+...+.|.++.||.+++.++..+++.-..
T Consensus 115 ~~~~~~~l~~~l~~~L~d~~~~VRk~A~~al~~i~~~~p-~~~~~~~~~~~l~~lL~d~d~~V~~~A~~aL~~i~~~~~~ 193 (591)
T 2vgl_B 115 VDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINA-QMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPN 193 (591)
T ss_dssp SGGGHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSC-CCHHHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSCCS
T ss_pred hHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhhCh-hhcccccHHHHHHHHhCCCChhHHHHHHHHHHHHHhhCCC
Confidence 455677788999999999999999887777777777544 4444 47899999999999999999999999999876432
Q ss_pred c---chhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhcc
Q psy3914 468 N---NLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYF 544 (852)
Q Consensus 468 ~---~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~ 544 (852)
. .+....++++.+.. .|..+-.++.++-+|+++++.-. . ..+.+++.+...+++....+|..|+.++..+....
T Consensus 194 ~~~~~l~~~~~~~Ll~~l-~~~~~~~q~~il~~l~~l~~~~~-~-~~~~~l~~l~~~l~~~~~~V~~ea~~~i~~l~~~~ 270 (591)
T 2vgl_B 194 SNLLDLNPQNINKLLTAL-NECTEWGQIFILDCLSNYNPKDD-R-EAQSICERVTPRLSHANSAVVLSAVKVLMKFLELL 270 (591)
T ss_dssp CCSCCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHHTSCCCSH-H-HHHHHHHHHTTCSCSSTTHHHHHHHHHHHHSCCSC
T ss_pred ccchhccHHHHHHHHHcC-CCCCchHHHHHHHHHHHhCCCCh-H-HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHhhcc
Confidence 2 23345566665544 25555567777777877775422 2 23456777777889988899999999888766543
Q ss_pred -----CHHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHH
Q psy3914 545 -----LLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGK 582 (852)
Q Consensus 545 -----~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~ 582 (852)
....+..++.|.|..++ +++.+||-.|..+|..++.+
T Consensus 271 ~~~~~~~~~~~~~~~~~L~~L~-~~d~~vr~~aL~~l~~i~~~ 312 (591)
T 2vgl_B 271 PKDSDYYNMLLKKLAPPLVTLL-SGEPEVQYVALRNINLIVQK 312 (591)
T ss_dssp CBTTBSHHHHHHHTHHHHHHHT-TSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHh-cCCccHHHHHHHHHHHHHHh
Confidence 23456678888877654 57889999999998888765
|
| >3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00012 Score=84.69 Aligned_cols=195 Identities=14% Similarity=0.179 Sum_probs=148.7
Q ss_pred hhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCCh---HHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc
Q psy3914 391 DYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPD---AIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNY 467 (852)
Q Consensus 391 ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~---~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~ 467 (852)
.....++|.|+++..+.+..++...+.-|..+...-+. ..+...++|.|+..+.+.+..||..+++.+-.|+..-+.
T Consensus 228 ~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~~ 307 (510)
T 3ul1_B 228 DAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDE 307 (510)
T ss_dssp HHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhhchhhhHHHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcCCHH
Confidence 34467899999999999999987777777777655432 234556899999999999999999999999888754322
Q ss_pred ---cchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccCh---hhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHh
Q psy3914 468 ---NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHP---QIRQKVLISAFSRAMRDPFPPARNAGVLALAATQ 541 (852)
Q Consensus 468 ---~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~---~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~ 541 (852)
..++...++.|..+. .++...||..++-+|+.|+..-.. .....-++|.+...++++...+|..|+.+|..+.
T Consensus 308 ~~~~i~~~g~l~~L~~LL-~~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~ 386 (510)
T 3ul1_B 308 QTQKVIDAGALAVFPSLL-TNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYT 386 (510)
T ss_dssp HHHHHHHTTGGGGCC-CT-TCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccchHHHHHHh-cCCCHHHHHHHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 223445677777776 578889999999999999865322 1223346788999999999999999999998766
Q ss_pred hccCHHH----HHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhhh
Q psy3914 542 QYFLLSE----VAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQV 586 (852)
Q Consensus 542 ~~~~~~~----~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~~ 586 (852)
...+.+. +-.-++|.|+.++-.++..++..+..+|..++..-++.
T Consensus 387 ~~~~~~~~~~L~~~g~i~~L~~LL~~~d~~i~~~~L~aL~nil~~~~~~ 435 (510)
T 3ul1_B 387 SGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKL 435 (510)
T ss_dssp HHCCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhc
Confidence 6666554 33568999999999999999998988888887665543
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00014 Score=78.41 Aligned_cols=69 Identities=10% Similarity=-0.109 Sum_probs=48.5
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCC---CcceEeeeEEcCCCCeEEEEEeecc--cHHH
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHP---SILTFLDSVESPSKSLVYLAVEYVE--PIFY 146 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHP---nIlk~~d~~e~~~~~~~yIVtE~v~--~L~~ 146 (852)
.|....+|.. |..+.||+.........+.+|+..|+.|.+. .|.+++.+... ..+..|+|||++. +|..
T Consensus 29 ~G~~n~v~~v-----g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~-~~g~~~~v~e~i~G~~l~~ 102 (306)
T 3tdw_A 29 EGFRNYAILV-----NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR-SDGNPFVGYRKVQGQILGE 102 (306)
T ss_dssp ECSSEEEEEE-----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC-TTSCEEEEEECCCSEECHH
T ss_pred CCcceeEEEE-----CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc-CCCceEEEEeccCCeECch
Confidence 5666788877 4678888864333456789999999999752 36667766652 1266789999998 5554
|
| >3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=97.73 E-value=4.2e-05 Score=78.63 Aligned_cols=138 Identities=14% Similarity=0.113 Sum_probs=111.3
Q ss_pred hHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHH
Q psy3914 432 NEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQ 511 (852)
Q Consensus 432 ~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~ 511 (852)
.+.+++++.....+...+||-.++..+-.+ . . ..++|+.+......|+.|+||-.++..+++++...+++.
T Consensus 69 ~~~~~~la~~L~~~~~deVR~~Av~lLg~~-~-----~-~~~~L~~ir~~va~D~~WrVre~lA~a~~~~~~~~~pe~-- 139 (240)
T 3l9t_A 69 GEYIKKLAFLAYQSDVYQVRMYAVFLFGYL-S-----K-DKEILIFMRDEVSKDNNWRVQEVLAKAFDEFCKKIEYKK-- 139 (240)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHT-T-----T-SHHHHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHCTTT--
T ss_pred HHHHHHHHHHHHhCcchHHHHHHHHHHHhc-c-----C-cHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHHH--
Confidence 677889999999999999999999965554 2 2 367899998855689999999999999999997666652
Q ss_pred HHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHH
Q psy3914 512 KVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFL 580 (852)
Q Consensus 512 ~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l 580 (852)
+++.+...++|+...+|-+|+.++--.+.......--..++|.|.++..|++.-||......++.|.
T Consensus 140 --~l~~~~~W~~d~n~~VRR~Ase~~rpW~~~~~~k~dp~~ll~iL~~L~~D~s~yVrKSVan~LrD~S 206 (240)
T 3l9t_A 140 --ALPIIDEWLKSSNLHTRRAATEGLRIWTNRPYFKENPNEAIRRIADLKEDVSEYVRKSVGNALRDIS 206 (240)
T ss_dssp --THHHHHHHHHCSSHHHHHHHHHHTCSGGGSTTTTTCHHHHHHHHHTTTTCSCHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHhcCCCHHHHHHHHHhhHHHhccchhhcCHHHHHHHHHHhcCChHHHHHHHHHHHHHHHh
Confidence 5667888999999999999998864322222334455779999999999999999998888877764
|
| >1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00012 Score=78.80 Aligned_cols=173 Identities=12% Similarity=0.106 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHccCChH--HHhHhHHHHHHh-hcCCCcHHHHHHHHHHHHHhccc---CCccchhhhHHHHHHHHhc
Q psy3914 410 ATRSRLLLQLEHFIGHVPDA--IVNEQIFQQVAL-GFLDTNPTIREQTVKSIIHLAPK---LNYNNLNVETLRHFARLQA 483 (852)
Q Consensus 410 ~iR~~LL~~L~~~~~~l~~~--~v~~~I~P~l~~-g~~D~~~~iRe~tlksi~~l~~k---l~~~~l~~~lL~~l~kl~~ 483 (852)
..|...|+.|..+++.++.. .+.--.+|.|+. .+.+.++.||++++..+-.++.- .....++...++.|.++..
T Consensus 55 e~k~~Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~ 134 (296)
T 1xqr_A 55 QEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLD 134 (296)
T ss_dssp HHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhChhhHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHc
Confidence 45777888888888876532 233457899999 99999999999999999988753 2223344557888888875
Q ss_pred cCCCcceeeehhhhhcccccccChh---hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccC---HHHHHHhHhhhh
Q psy3914 484 KDDQGGIRTNTTVCVGKIAHHLHPQ---IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFL---LSEVAQRILPAL 557 (852)
Q Consensus 484 ~D~~~~IR~nt~iclgkia~~L~~~---~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~---~~~~a~~ILP~L 557 (852)
.++...||.+++-+|+.|+..-.+. ....-.+|.+.+.|+++...+|..++.+|..+..... ...+-.-++|.|
T Consensus 135 ~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~L 214 (296)
T 1xqr_A 135 RDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQL 214 (296)
T ss_dssp HCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHH
Confidence 5667899999999999998754432 2233467889999999999999999998876554422 223556799999
Q ss_pred hhcccCCChhhHHHHHHHHHHHHHH
Q psy3914 558 CQLSTDPEKSVRDSAFKTIKGFLGK 582 (852)
Q Consensus 558 ~~l~~D~~~~Vr~~a~~~i~~~l~~ 582 (852)
+.|+..++..||..|..+|..++..
T Consensus 215 v~LL~~~d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 215 VALVRTEHSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHHHTSCCSTHHHHHHHHHHHHHTT
T ss_pred HHHHcCCChhHHHHHHHHHHHHHhC
Confidence 9999999999999999999888755
|
| >4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00037 Score=73.86 Aligned_cols=184 Identities=12% Similarity=0.101 Sum_probs=130.9
Q ss_pred hhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhH-------hHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccc
Q psy3914 397 VPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNE-------QIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNN 469 (852)
Q Consensus 397 ~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~-------~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~ 469 (852)
+| +..-+.+..-..|..-++.|..++.........+ .+.+.+..++.|+|..|++.++..+..++..+....
T Consensus 12 lp-l~e~l~sk~WK~R~eale~l~~~~~~~~~~~~~~~~~~~~~~~~~~lkk~l~DsN~~v~~~al~~l~~~~~~~~~~~ 90 (278)
T 4ffb_C 12 LP-LEERLTYKLWKARLEAYKELNQLFRNSVGDISRDDNIQIYWRDPTLFAQYITDSNVVAQEQAIVALNSLIDAFASSS 90 (278)
T ss_dssp CC-HHHHTTCSSHHHHHHHHHHHHHHHHTC----------CCTTSCTHHHHHHTTCSSHHHHHHHHHHHHHHHTTCC---
T ss_pred CC-HHHhcccCcHHHHHHHHHHHHHHHhhCcccccchhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhh
Confidence 56 4445678888999999998888887765444332 345678888999999999999999999988765432
Q ss_pred h--------hhhHHHHHH-HHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHH
Q psy3914 470 L--------NVETLRHFA-RLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAAT 540 (852)
Q Consensus 470 l--------~~~lL~~l~-kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~ 540 (852)
. -..+++.|. |.. .|....+|..+.-|+-.++...... .+++..+...++...+.+|.+++..|..+
T Consensus 91 ~~~~~~~~~~~~~l~~lveK~l-~~~k~~~~~~a~~~l~~~~~~~~~~---~~~~e~l~~~l~~Knpkv~~~~l~~l~~~ 166 (278)
T 4ffb_C 91 LKNAHNITLISTWTPLLVEKGL-TSSRATTKTQSMSCILSLCGLDTSI---TQSVELVIPFFEKKLPKLIAAAANCVYEL 166 (278)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHTSSSS---HHHHHHHGGGGGCSCHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHh-cCccHHHHHHHHHHHHHHHHhcCcH---HHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 1 133566554 433 5888899999888888777654431 23445556677888899999999988877
Q ss_pred hhccC-----HHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhh
Q psy3914 541 QQYFL-----LSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQ 585 (852)
Q Consensus 541 ~~~~~-----~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~ 585 (852)
...|+ +......|++.|..++-|++..||+.|..++..+...+..
T Consensus 167 l~~fg~~~~~~k~~l~~i~~~l~k~l~d~~~~VR~aA~~l~~~ly~~~G~ 216 (278)
T 4ffb_C 167 MAAFGLTNVNVQTFLPELLKHVPQLAGHGDRNVRSQTMNLIVEIYKVTGN 216 (278)
T ss_dssp HHHHTTTTCCHHHHHHHHGGGHHHHHTCSSHHHHHHHHHHHHHHHTC---
T ss_pred HHHhCCCcCCchhHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhCc
Confidence 66665 3445667899999999999999999999988777766653
|
| >2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00034 Score=73.78 Aligned_cols=175 Identities=14% Similarity=0.160 Sum_probs=130.8
Q ss_pred hccccCCHHHHHHHHHHHHHHHccCChHHH--hHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCcc---ch---hhh
Q psy3914 402 KLFGSNDRATRSRLLLQLEHFIGHVPDAIV--NEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYN---NL---NVE 473 (852)
Q Consensus 402 ~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v--~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~---~l---~~~ 473 (852)
.||+ .|-..|+..++.|...+..-+.+.+ .|-||+.+...|-|+|+.|-..++..+..++..|... .. -..
T Consensus 54 ~lfs-~d~k~~~~ale~L~~~l~~~~~~~~~~lDll~kw~~lr~~d~N~~v~~~~L~~L~~l~~~l~~~~y~~~~~ea~~ 132 (266)
T 2of3_A 54 QLFH-KDFKQHLAALDSLVRLADTSPRSLLSNSDLLLKWCTLRFFETNPAALIKVLELCKVIVELIRDTETPMSQEEVSA 132 (266)
T ss_dssp HHTC-SCHHHHHHHHHHHHHHHHHCHHHHHHTHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HhcC-CCHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhccccchHHHHHH
Confidence 3444 5888888888888877766443333 2236888777788999999999999999887776543 22 145
Q ss_pred HHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhH
Q psy3914 474 TLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRI 553 (852)
Q Consensus 474 lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~I 553 (852)
+||+|..-. .|..-.||..+--++..|.....+...-. .+...++.-..-+|...+.-+..+++.|+.. -.+.
T Consensus 133 ~lP~LveKl-Gd~k~~vR~~~r~il~~l~~v~~~~~v~~----~l~~g~ksKN~R~R~e~l~~l~~li~~~G~~--~~~~ 205 (266)
T 2of3_A 133 FVPYLLLKT-GEAKDNMRTSVRDIVNVLSDVVGPLKMTP----MLLDALKSKNARQRSECLLVIEYYITNAGIS--PLKS 205 (266)
T ss_dssp HHHHHHHGG-GCSSHHHHHHHHHHHHHHHHHHCHHHHHH----HHHHGGGCSCHHHHHHHHHHHHHHHHHHCSG--GGGG
T ss_pred HHHHHHHHh-CCChHHHHHHHHHHHHHHHHHCCHHHHHH----HHHHHHccCCHHHHHHHHHHHHHHHHhcCCC--cccc
Confidence 789975444 59889999999888877776555553333 3344566677889999999999999988876 4678
Q ss_pred h---hhhhhcccCCChhhHHHHHHHHHHHHHHHh
Q psy3914 554 L---PALCQLSTDPEKSVRDSAFKTIKGFLGKLE 584 (852)
Q Consensus 554 L---P~L~~l~~D~~~~Vr~~a~~~i~~~l~~le 584 (852)
| |.|+.++.|++.+||++|..++...-..+.
T Consensus 206 l~~~~~ia~ll~D~d~~VR~aAl~~lve~y~~~G 239 (266)
T 2of3_A 206 LSVEKTVAPFVGDKDVNVRNAAINVLVACFKFEG 239 (266)
T ss_dssp GCHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHHT
T ss_pred ccchHHHHHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 9 999999999999999999998876655544
|
| >4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00012 Score=73.37 Aligned_cols=149 Identities=15% Similarity=0.151 Sum_probs=113.8
Q ss_pred HhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc---cchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccCh
Q psy3914 431 VNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNY---NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHP 507 (852)
Q Consensus 431 v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~---~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~ 507 (852)
..+..+|.|...+.+.++.+|+.++..+-.++..-.+ ..+....++.|.++. .++++.||..++.+|+.|+..- +
T Consensus 9 ~~~~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL-~~~~~~v~~~a~~~L~~l~~~~-~ 86 (210)
T 4db6_A 9 HHGSELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLL-SSPNEQILQEALWALSNIASGG-N 86 (210)
T ss_dssp ----CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHT-TCSCHHHHHHHHHHHHHHTTSC-H
T ss_pred cccchhHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHH-cCCCHHHHHHHHHHHHHHhcCC-c
Confidence 4556788899999999999999999999988743222 223345788888887 5778999999999999998542 2
Q ss_pred hhHHHH----HHHHHHhhccCCChHHHHHHHHHHHHHhhccCH---HHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHH
Q psy3914 508 QIRQKV----LISAFSRAMRDPFPPARNAGVLALAATQQYFLL---SEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFL 580 (852)
Q Consensus 508 ~~~~~v----Li~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~---~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l 580 (852)
..+..+ .++.+...|+++...+|..++.+|..+...... ..+...++|.|..++.+++..||..|..++..+.
T Consensus 87 ~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~ 166 (210)
T 4db6_A 87 EQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIA 166 (210)
T ss_dssp HHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 333333 578999999999999999999998877653221 1234668999999999999999999999888876
Q ss_pred H
Q psy3914 581 G 581 (852)
Q Consensus 581 ~ 581 (852)
.
T Consensus 167 ~ 167 (210)
T 4db6_A 167 S 167 (210)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00084 Score=77.87 Aligned_cols=254 Identities=10% Similarity=0.120 Sum_probs=163.6
Q ss_pred HhhccCHHHHhHHHHhhhhhhc--cCC--cccccccchhhhHhhhhcCCCccc---chhhhhhhcccCCh---hhhhcch
Q psy3914 327 EIQMKDKIDKNKFFNGLASAID--KFP--KLISCHKVLPQLINAFEYGEAGAS---VLSPLFKIGQMLEH---EDYQAKI 396 (852)
Q Consensus 327 el~~k~~~eK~~Ff~~L~~~l~--~fP--~~~~~~kiLP~Ll~~~e~~~~~~~---vL~~llki~~~l~~---~ef~~~i 396 (852)
.+...+...+..-+..+.+.+. .-| +.+...-++|.|+..+...+.... +.-.|..|+..-+. .-...-.
T Consensus 84 ~l~s~d~~~q~~a~~~~rklLs~~~~~~i~~ii~~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~~~~vv~~Ga 163 (529)
T 3tpo_A 84 GINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGA 163 (529)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHTSSSCCCHHHHHHTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTH
T ss_pred HhcCCCHHHHHHHHHHHHHHHcCCCCchHHHHHHCCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCC
Confidence 3444455555555555555442 223 245667789999988865543211 22223334332221 1223446
Q ss_pred hhhhhhccccCCHHHHHHHHHHHHHHHcc---CChHHHhHhHHHHHHhhcCCCcH-----HHHHHHHHHHHHhcccC-Cc
Q psy3914 397 VPCVVKLFGSNDRATRSRLLLQLEHFIGH---VPDAIVNEQIFQQVALGFLDTNP-----TIREQTVKSIIHLAPKL-NY 467 (852)
Q Consensus 397 ~P~i~~LF~~~dr~iR~~LL~~L~~~~~~---l~~~~v~~~I~P~l~~g~~D~~~-----~iRe~tlksi~~l~~kl-~~ 467 (852)
+|.++.|+.+++..+|...+.-|..++.. .-...+..-++|.|+..+.+... .+...++..+..++.-- ..
T Consensus 164 ip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~ 243 (529)
T 3tpo_A 164 IPAFISLLASPHAHISEQAVWALGNIAGAGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPA 243 (529)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHTTCSSCGGGSCHHHHHHHHHHHHHHHCCCTTC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhccCHHHHHHHHHcCCcHHHHHHHhccchhHhHHHHHHHHHHHHHHHHhcccch
Confidence 89999999999999987666666655533 22333455578888888876432 23444444555544321 11
Q ss_pred c--chhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChh---hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhh
Q psy3914 468 N--NLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ---IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQ 542 (852)
Q Consensus 468 ~--~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~---~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~ 542 (852)
. .....++|.|.++. .+....|+.+++.||+.++..-... ....-+++.+..+|+++...++..++.++..+..
T Consensus 244 ~~~~~~~~~lp~L~~LL-~~~~~~v~~~a~~aL~~l~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~ 322 (529)
T 3tpo_A 244 PPLDAVEQILPTLVRLL-HHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVT 322 (529)
T ss_dssp CCHHHHHHHHHHHHHHT-TSSCHHHHHHHHHHHHHHHSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTT
T ss_pred hhHHHHhhHHHHHHHHh-cCCcHHHHHHHHHHHHHhhhhhhhhHHHHHhccchHHHHHHhcCCChhHHHHHHHHHHHHHc
Confidence 1 12245789999887 5888899999999999998753321 2223357888999999999999999998876653
Q ss_pred ccC---HHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHH
Q psy3914 543 YFL---LSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLG 581 (852)
Q Consensus 543 ~~~---~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~ 581 (852)
.-+ ...+...++|.|..++.+++..||..|.-+|..+..
T Consensus 323 ~~~~~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~aL~nl~~ 364 (529)
T 3tpo_A 323 GTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITA 364 (529)
T ss_dssp SCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHhhcccHHHHHHHHcCCCHHHHHHHHHHHHHHhc
Confidence 222 223556789999999999999999998888877654
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0018 Score=66.03 Aligned_cols=140 Identities=11% Similarity=0.037 Sum_probs=98.0
Q ss_pred cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhccccccCCCCcc
Q psy3914 143 PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKR 222 (852)
Q Consensus 143 ~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~ 222 (852)
+|.++|.. .+.++++++++.+++|.+.+|.-+-....-..+=+.|..|++..+|.+.+.+ ....
T Consensus 34 SL~eIL~~---~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 34 SLEEILRL---YNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred cHHHHHHH---cCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc------------
Confidence 79999953 3479999999999999999988873122222444568999999999998764 1110
Q ss_pred cccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccCcCCCChhHHHHHHHhccC----------
Q psy3914 223 YSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNIDNIPENLKRVYLELISE---------- 292 (852)
Q Consensus 223 ~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~~~~ip~~L~~li~~lL~~---------- 292 (852)
.....+.|||... ...+.+.=|||||++||..+--..|- ..-..+++.|..+|..|.+.
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e------~eE~eLS~~LE~LL~~Mt~~~~d~~~~DeG 166 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE------NEERELSPPLEQLIDHMANTVEADGSNDEG 166 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT------TEEECCCHHHHHHHHHHTTCCC--------
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc------ccchhhCHHHHHHHHHHHhccccccccccc
Confidence 0111577888763 23456788999999999998754443 23457899999999999866
Q ss_pred ---------------CCCCCCCHHHHHHhhcC
Q psy3914 293 ---------------RPNQRPNPADFIMRNRK 309 (852)
Q Consensus 293 ---------------nP~~Rps~~elL~~l~~ 309 (852)
.+..|.++.++++.|..
T Consensus 167 ~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~ 198 (229)
T 2yle_A 167 YEAAEEGLGDEDEKRKISAIRSYRDVMKLCAA 198 (229)
T ss_dssp ------------CCSCCCCCCSHHHHHHHHHT
T ss_pred ccccccccccccccccccCcCCHHHHHHHHHh
Confidence 34688999999999873
|
| >1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16 | Back alignment and structure |
|---|
Probab=97.47 E-value=1.7e-05 Score=74.28 Aligned_cols=119 Identities=12% Similarity=0.152 Sum_probs=76.3
Q ss_pred HhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHH
Q psy3914 433 EQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQK 512 (852)
Q Consensus 433 ~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~ 512 (852)
..-+|.+...+.|.++.+|..++..+-.+ .... ++.|.++. +|+++.||..++..||++.. .
T Consensus 11 ~~~~~~l~~~L~~~~~~vR~~A~~~L~~~----~~~~-----~~~L~~~L-~d~~~~vR~~A~~aL~~~~~--------~ 72 (131)
T 1te4_A 11 SSGLVPRGSHMADENKWVRRDVSTALSRM----GDEA-----FEPLLESL-SNEDWRIRGAAAWIIGNFQD--------E 72 (131)
T ss_dssp ----------CCSSCCCSSSSCCSSTTSC----SSTT-----HHHHHHGG-GCSCHHHHHHHHHHHGGGCS--------H
T ss_pred cccHHHHHHHhcCCCHHHHHHHHHHHHHh----CchH-----HHHHHHHH-cCCCHHHHHHHHHHHHhcCC--------H
Confidence 33456677777888888887776555432 2221 35555555 47888888888888888763 2
Q ss_pred HHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHH
Q psy3914 513 VLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIK 577 (852)
Q Consensus 513 vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~ 577 (852)
..++++...++|+.+.+|.+++.+|..+.. ...+|.|..++-|++..||..|..++.
T Consensus 73 ~a~~~L~~~L~d~~~~VR~~A~~aL~~~~~--------~~a~~~L~~~l~d~~~~vr~~A~~aL~ 129 (131)
T 1te4_A 73 RAVEPLIKLLEDDSGFVRSGAARSLEQIGG--------ERVRAAMEKLAETGTGFARKVAVNYLE 129 (131)
T ss_dssp HHHHHHHHHHHHCCTHHHHHHHHHHHHHCS--------HHHHHHHHHHTTSCCTHHHHHHHHHGG
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--------HHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 235667777788888888888888876542 346778888888888888887777654
|
| >3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0018 Score=71.30 Aligned_cols=148 Identities=11% Similarity=0.141 Sum_probs=108.2
Q ss_pred hcccCChhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhc
Q psy3914 383 IGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLA 462 (852)
Q Consensus 383 i~~~l~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~ 462 (852)
.|..+++.| .+.+++.++++|.++|..+|-.+.-.+..|.+. +++.+ -+...|.+=++|.++.||-.||+++..|.
T Consensus 57 ~G~~f~~~e-~t~lf~~v~kl~~s~d~~lKrLvYLyl~~~~~~-~~e~i--Lv~Nsl~kDl~~~N~~iR~lALRtL~~I~ 132 (355)
T 3tjz_B 57 QGEHLGTTE-ATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCI-AEDVI--IVTSSLTKDMTGKEDSYRGPAVRALCQIT 132 (355)
T ss_dssp HTCCCCHHH-HHHHHHHHHGGGGCCCHHHHHHHHHHHHHHTTT-SSCGG--GGHHHHHHHHHSSCHHHHHHHHHHHHHHC
T ss_pred CCCCCchhH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCC-HHHHH--HHHHHHHhhcCCCcHhHHHHHHHHHhcCC
Confidence 344444433 356788999999999999986666666666665 43333 55667778888999999999999998775
Q ss_pred ccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHh
Q psy3914 463 PKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQ 541 (852)
Q Consensus 463 ~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~ 541 (852)
...+-..+.+++.+.. .|..+.||-++++|..++.+. .++...+ .+.....++.|..+-+-..|+..+..+.
T Consensus 133 ----~~~m~~~l~~~lk~~L-~d~~pyVRk~A~l~~~kL~~~-~pe~v~~-~~~~l~~ll~d~n~~V~~~Al~lL~ei~ 204 (355)
T 3tjz_B 133 ----DSTMLQAIERYMKQAI-VDKVPSVSSSALVSSLHLLKC-SFDVVKR-WVNEAQEAASSDNIMVQYHALGLLYHVR 204 (355)
T ss_dssp ----CTTTHHHHHHHHHHHH-TCSSHHHHHHHHHHHHHHTTT-CHHHHHT-THHHHHHHTTCSSHHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHhcc-CHHHHHH-HHHHHHHHhcCCCccHHHHHHHHHHHHH
Confidence 3445667888888887 599999999999999999865 5555443 5667777888887666666665555443
|
| >2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0011 Score=78.63 Aligned_cols=185 Identities=15% Similarity=0.077 Sum_probs=131.3
Q ss_pred hcchhhhhhhccccCCHHHHHHHHHHHHHHHccCC---hHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc--
Q psy3914 393 QAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVP---DAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNY-- 467 (852)
Q Consensus 393 ~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~---~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~-- 467 (852)
..-++|.++.+..+.+..++...+.-|..+...-+ ...+...++|.|+..+.+.++.++..++..+..|+-.-.+
T Consensus 96 ~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~~~~~ 175 (644)
T 2z6h_A 96 KSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESK 175 (644)
T ss_dssp TTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcCCHHHHHHHHHHHHHHHhcCcHHH
Confidence 34578999999999999988776666666654432 2334678999999999999999998888777777642111
Q ss_pred -cchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHH----HHHHHHhhccCCChHHHHHHHHHHHHHhh
Q psy3914 468 -NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV----LISAFSRAMRDPFPPARNAGVLALAATQQ 542 (852)
Q Consensus 468 -~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~v----Li~af~r~lkDp~~~~R~a~l~~l~~~~~ 542 (852)
..+....++.|.++........++.+++-+|..++. .+..+..+ .++.+.+.++++...+|..++.+|..+..
T Consensus 176 ~~i~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~--~~~~~~~l~~~g~l~~L~~ll~~~~~~~~~~a~~~L~nL~~ 253 (644)
T 2z6h_A 176 LIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSV--CSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSD 253 (644)
T ss_dssp HHHHHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHTT--CTTHHHHHHHTTHHHHHHTTTTCSCHHHHHHHHHHHHHHGG
T ss_pred HHHHHcCChHHHHHHHHcCChHHHHHHHHHHHHHHhc--CcccHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence 123345577777776433344566777778777774 34444443 47888999999999999999988877765
Q ss_pred ccCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHH
Q psy3914 543 YFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGF 579 (852)
Q Consensus 543 ~~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~ 579 (852)
..........++|.|..++-+.+..||..|..++..+
T Consensus 254 ~~~~~~~~~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L 290 (644)
T 2z6h_A 254 AATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNL 290 (644)
T ss_dssp GCTTCCSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred cchhhhhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 4432233347899999999999999998776665443
|
| >1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00066 Score=80.52 Aligned_cols=157 Identities=10% Similarity=0.132 Sum_probs=112.9
Q ss_pred hhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHH
Q psy3914 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETL 475 (852)
Q Consensus 396 i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL 475 (852)
..+.+++++++++-..|-..--.+..|++. ..++.--+...|..-+.|.++.+|..++++|-.+.. ..+-..++
T Consensus 71 ~~~~vik~~~s~~~~~Krl~Yl~~~~~~~~--~~e~~~l~in~l~kDL~~~n~~vr~lAL~~L~~i~~----~~~~~~l~ 144 (618)
T 1w63_A 71 GQLECLKLIASQKFTDKRIGYLGAMLLLDE--RQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGS----SEMCRDLA 144 (618)
T ss_dssp GHHHHHHHHHSSSHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHSCSSSHHHHHHHHHHHHHCC----HHHHHHHH
T ss_pred hHHHHHHHHcCCchHHHHHHHHHHHHHhCC--CcHHHHHHHHHHHHhcCCCCHhHHHHHHHHHHhcCC----HHHHHHHH
Confidence 566777899999888863322244445432 233444567788888999999999999999998873 34556778
Q ss_pred HHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHH--HHHHhH
Q psy3914 476 RHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLS--EVAQRI 553 (852)
Q Consensus 476 ~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~--~~a~~I 553 (852)
+.+.++. +|.++.||-+++.|+++|... .++... .+++.+..++.|+.+.++.+|+.++..+...- ++ ..-.++
T Consensus 145 ~~l~~~L-~~~~~~VRk~A~~al~~l~~~-~p~~v~-~~~~~l~~lL~D~d~~V~~~Al~~L~~i~~~~-~~~~~~~~~~ 220 (618)
T 1w63_A 145 GEVEKLL-KTSNSYLRKKAALCAVHVIRK-VPELME-MFLPATKNLLNEKNHGVLHTSVVLLTEMCERS-PDMLAHFRKL 220 (618)
T ss_dssp HHHHHHH-HSCCHHHHHHHHHHHHHHHHH-CGGGGG-GGGGGTTTSTTCCCHHHHHHHHHHHHHHCCSH-HHHHHHHHTT
T ss_pred HHHHHHH-cCCCHHHHHHHHHHHHHHHHH-ChHHHH-HHHHHHHHHhCCCCHhHHHHHHHHHHHHHHhC-hHHHHHHHHH
Confidence 8888887 599999999999999999874 455433 45666778899999999999999887766432 11 123456
Q ss_pred hhhhhhccc
Q psy3914 554 LPALCQLST 562 (852)
Q Consensus 554 LP~L~~l~~ 562 (852)
+|.|+.++.
T Consensus 221 v~~l~~~L~ 229 (618)
T 1w63_A 221 VPQLVRILK 229 (618)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666665443
|
| >3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0024 Score=73.75 Aligned_cols=250 Identities=10% Similarity=0.114 Sum_probs=158.0
Q ss_pred cCHHHHhHHHHhhhhhhc--cCC--cccccccchhhhHhhhhcCCCcc---cchhhhhhhcccCCh---hhhhcchhhhh
Q psy3914 331 KDKIDKNKFFNGLASAID--KFP--KLISCHKVLPQLINAFEYGEAGA---SVLSPLFKIGQMLEH---EDYQAKIVPCV 400 (852)
Q Consensus 331 k~~~eK~~Ff~~L~~~l~--~fP--~~~~~~kiLP~Ll~~~e~~~~~~---~vL~~llki~~~l~~---~ef~~~i~P~i 400 (852)
.+...+.+-...+++.+. .-| +.+...-++|.|+..+...+... .+.-.|-.|+..-+. .-...-.+|.+
T Consensus 69 ~d~~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~~~vv~~GaIp~L 148 (510)
T 3ul1_B 69 NNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAF 148 (510)
T ss_dssp SCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHH
Confidence 344444444444444442 223 24555668999998886544211 112223334332211 11223468999
Q ss_pred hhccccCCHHHHHHHHHHHHHHHccC---ChHHHhHhHHHHHHhhcCCCcH-----HHHHHHHHHHHHhcccC-Cccc--
Q psy3914 401 VKLFGSNDRATRSRLLLQLEHFIGHV---PDAIVNEQIFQQVALGFLDTNP-----TIREQTVKSIIHLAPKL-NYNN-- 469 (852)
Q Consensus 401 ~~LF~~~dr~iR~~LL~~L~~~~~~l---~~~~v~~~I~P~l~~g~~D~~~-----~iRe~tlksi~~l~~kl-~~~~-- 469 (852)
+.+..+++..+|...+.-|..++..- -...+..-++|.|+..+.+.+. .++..++..+..++.-- ....
T Consensus 149 v~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~ 228 (510)
T 3ul1_B 149 ISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLD 228 (510)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHHCCCSSCCCHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCChHHHHHHHHhccchhhhHHHHHHHHHHHHHHhhcccchhHHH
Confidence 99999999999876666666665432 2233455578888888875432 33444455555554321 1111
Q ss_pred hhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChh---hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccC-
Q psy3914 470 LNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ---IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFL- 545 (852)
Q Consensus 470 l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~---~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~- 545 (852)
.-..++|.|.++. .+....||.+++.||..|+..-... ....-+++.+...++++...++..++.++..+...-+
T Consensus 229 ~~~~~lp~L~~LL-~~~~~~v~~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~~ 307 (510)
T 3ul1_B 229 AVEQILPTLVRLL-HHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDE 307 (510)
T ss_dssp HHHHHHHHHHHHT-TCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHhHHHHHHHHH-hcCCHHHHHHHHHHHHHHhhchhhhHHHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcCCHH
Confidence 1246789999887 5888899999999999998753321 1222357888999999999999999998876643322
Q ss_pred --HHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHH
Q psy3914 546 --LSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLG 581 (852)
Q Consensus 546 --~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~ 581 (852)
...+...++|.|..++.+++..||..|..+|..+..
T Consensus 308 ~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~aL~nl~a 345 (510)
T 3ul1_B 308 QTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITA 345 (510)
T ss_dssp HHHHHHHTTGGGGCC-CTTCSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHhhccchHHHHHHhcCCCHHHHHHHHHHHHHHHc
Confidence 223556789999999999999999998888877653
|
| >1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0012 Score=75.59 Aligned_cols=184 Identities=15% Similarity=0.075 Sum_probs=128.8
Q ss_pred cchhhhhhhccccCCHHHHHHHHHHHHHHHccCC---hHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc---
Q psy3914 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVP---DAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNY--- 467 (852)
Q Consensus 394 ~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~---~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~--- 467 (852)
.-.+|.++.+....+..++...+.-|..+...-+ ...+...++|.|+..+.+.++.+|..++..+-.++..-.+
T Consensus 100 ~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~ 179 (529)
T 1jdh_A 100 SGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKL 179 (529)
T ss_dssp TTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 4578999999999999888766666665554432 2334677899999999999999999988877776642111
Q ss_pred cchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHH----HHHHHHhhccCCChHHHHHHHHHHHHHhhc
Q psy3914 468 NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV----LISAFSRAMRDPFPPARNAGVLALAATQQY 543 (852)
Q Consensus 468 ~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~v----Li~af~r~lkDp~~~~R~a~l~~l~~~~~~ 543 (852)
..+....++.+.++........++..++-+|..++. ++..+..+ .++.+...++++....|..++.++..+...
T Consensus 180 ~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~--~~~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~L~~l~~~ 257 (529)
T 1jdh_A 180 IILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSV--CSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDA 257 (529)
T ss_dssp HHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT--STTHHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHCCCHHHHHHHHHhCChHHHHHHHHHHHHHHhc--CcccHHHHHHCCCHHHHHHHHhCCChHHHHHHHHHHHHHhcC
Confidence 112334566666655333333445556667777764 34444443 478899999999889999888888776655
Q ss_pred cCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHH
Q psy3914 544 FLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGF 579 (852)
Q Consensus 544 ~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~ 579 (852)
.........++|.|..++-+++..||..|..++..+
T Consensus 258 ~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L 293 (529)
T 1jdh_A 258 ATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNL 293 (529)
T ss_dssp CTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred ChhhHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 433333357899999999999999998887776655
|
| >1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00069 Score=77.60 Aligned_cols=222 Identities=12% Similarity=0.066 Sum_probs=140.5
Q ss_pred cccchhhhHhhhhcCCC--cccchhhhhhhcccCChhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccC---ChHH
Q psy3914 356 CHKVLPQLINAFEYGEA--GASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHV---PDAI 430 (852)
Q Consensus 356 ~~kiLP~Ll~~~e~~~~--~~~vL~~llki~~~l~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l---~~~~ 430 (852)
...++|.|+..+..+.. ...++-.+..++...+..+....++|.+++++...+..+|...+.-|..+...- -...
T Consensus 225 ~~g~~~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~ 304 (529)
T 1jdh_A 225 EAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMV 304 (529)
T ss_dssp HTTHHHHHHTTTTSSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHH
T ss_pred HCCCHHHHHHHHhCCChHHHHHHHHHHHHHhcCChhhHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 34567777766654421 111222233344433333445678999999999999999877666666554432 1223
Q ss_pred HhHhHHHHHHhhcCC--CcHHHHHHHHHHHHHhcccCCc------cchhhhHHHHHHHHhccCCC-cceeeehhhhhccc
Q psy3914 431 VNEQIFQQVALGFLD--TNPTIREQTVKSIIHLAPKLNY------NNLNVETLRHFARLQAKDDQ-GGIRTNTTVCVGKI 501 (852)
Q Consensus 431 v~~~I~P~l~~g~~D--~~~~iRe~tlksi~~l~~kl~~------~~l~~~lL~~l~kl~~~D~~-~~IR~nt~iclgki 501 (852)
+....+|.|+..+.+ .++.+|+.++..+-.|+..-.. ..+....++.|.++.. ++. +.||..++-+|+.|
T Consensus 305 ~~~~~v~~L~~ll~~~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~~i~~L~~lL~-~~~~~~v~~~a~~~l~nl 383 (529)
T 1jdh_A 305 CQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLH-PPSHWPLIKATVGLIRNL 383 (529)
T ss_dssp HHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHTTS-TTCCHHHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHccCCHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHcCChhHHHHHhc-cccchHHHHHHHHHHHHH
Confidence 344568888888864 4589999999999988764322 2233356888888874 544 68999999999999
Q ss_pred ccccChhhHH----HHHHHHHHhhccCCChHHHHHHHH----------------------HHHHHhhccC--HHHHHHhH
Q psy3914 502 AHHLHPQIRQ----KVLISAFSRAMRDPFPPARNAGVL----------------------ALAATQQYFL--LSEVAQRI 553 (852)
Q Consensus 502 a~~L~~~~~~----~vLi~af~r~lkDp~~~~R~a~l~----------------------~l~~~~~~~~--~~~~a~~I 553 (852)
+.. +..+. .-++|.+...++++...+|..+.. ++..+...-. .......+
T Consensus 384 ~~~--~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~l~n~~~~~~~~~~~i~~~~~~al~~L~~~~~~~~~l~~~~~ 461 (529)
T 1jdh_A 384 ALC--PANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNT 461 (529)
T ss_dssp TTS--GGGHHHHHHTTHHHHHHHHHHHHHHHHC-----------CBTTBCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTC
T ss_pred hcC--hhhhHHHHHcCCHHHHHHHHHHHhHHHHHHHhcccCchhhhccccHHHHHHHHHHHHHHHhcCchHHHHHhccCC
Confidence 863 33332 235788888888877777664443 2222221100 01244567
Q ss_pred hhhhhhcccCCChhhHHHHHHHHHHHH
Q psy3914 554 LPALCQLSTDPEKSVRDSAFKTIKGFL 580 (852)
Q Consensus 554 LP~L~~l~~D~~~~Vr~~a~~~i~~~l 580 (852)
+|.|..++.|++.+||..+..++..+.
T Consensus 462 v~~l~~ll~~~~~~v~~~a~~~l~~l~ 488 (529)
T 1jdh_A 462 IPLFVQLLYSPIENIQRVAAGVLCELA 488 (529)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHcCCchHHHHHHHHHHHHHh
Confidence 899999999999999998888777654
|
| >2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00026 Score=86.40 Aligned_cols=223 Identities=13% Similarity=0.048 Sum_probs=143.4
Q ss_pred cccchhhhHhhhhcCCC--cccchhhhhhhcccCChhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCC---hHH
Q psy3914 356 CHKVLPQLINAFEYGEA--GASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVP---DAI 430 (852)
Q Consensus 356 ~~kiLP~Ll~~~e~~~~--~~~vL~~llki~~~l~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~---~~~ 430 (852)
...++|.|+..+..+.. ...++..+..++......+-...++|.|+.++...+..+|...+.-|..+...-+ ...
T Consensus 358 ~~g~l~~Ll~lL~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~i~~Lv~lL~~~d~~vr~~A~~aL~~L~~~~~~~~~~i 437 (780)
T 2z6g_A 358 EAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMV 437 (780)
T ss_dssp HTTHHHHHGGGTTCSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHH
T ss_pred HhchHHHHHHHHcCCchHHHHHHHHHHHHHhccchhhhhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 34456777766654321 1112233344444333333345789999999999999999877776666655422 122
Q ss_pred HhHhHHHHHHhhcCCC--cHHHHHHHHHHHHHhcccCCc------cchhhhHHHHHHHHhccCCCcceeeehhhhhcccc
Q psy3914 431 VNEQIFQQVALGFLDT--NPTIREQTVKSIIHLAPKLNY------NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIA 502 (852)
Q Consensus 431 v~~~I~P~l~~g~~D~--~~~iRe~tlksi~~l~~kl~~------~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia 502 (852)
+....+|.|+..+.+. ...||+.++..+-.|+..-.+ ..+....++.|.++...+..+.||..++-+|+.|+
T Consensus 438 ~~~g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~~~l~~L~~lL~~~~~~~v~~~A~~aL~nLa 517 (780)
T 2z6g_A 438 CQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLA 517 (780)
T ss_dssp HTTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHcCCHHHHHHHhcCCChHHHHHHHHHHHHHHh
Confidence 3445788888888753 348999999999988754333 12234568888888754444699999999999998
Q ss_pred cccChhhH----HHHHHHHHHhhccCCChH----------------------HHHHHHHHHHHHhhccC-HH-HHHHhHh
Q psy3914 503 HHLHPQIR----QKVLISAFSRAMRDPFPP----------------------ARNAGVLALAATQQYFL-LS-EVAQRIL 554 (852)
Q Consensus 503 ~~L~~~~~----~~vLi~af~r~lkDp~~~----------------------~R~a~l~~l~~~~~~~~-~~-~~a~~IL 554 (852)
. +...+ ..-+++.+...|+++... +|.+++.+|..+...-. .. .....++
T Consensus 518 ~--~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~aa~al~nq~~~~~~~~~~v~~~a~~aL~~La~~~~~~~~l~~~~~i 595 (780)
T 2z6g_A 518 L--CPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEACTGALHILARDIHNRIVIRGLNTI 595 (780)
T ss_dssp S--SHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTC------CCSTTCCHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCH
T ss_pred c--CHHHHHHHHHCCCHHHHHHHHHhcchhHHHHHhhccccchhhcccChHHHHHHHHHHHHHHhcChhhHHHHHHCCcH
Confidence 5 33333 233567777777664332 34455555554432100 11 2346689
Q ss_pred hhhhhcccCCChhhHHHHHHHHHHHH
Q psy3914 555 PALCQLSTDPEKSVRDSAFKTIKGFL 580 (852)
Q Consensus 555 P~L~~l~~D~~~~Vr~~a~~~i~~~l 580 (852)
|.|+.++.+++.+||..|..++..+.
T Consensus 596 ~~Lv~lL~~~~~~v~~~a~~aL~~L~ 621 (780)
T 2z6g_A 596 PLFVQLLYSPIENIQRVAAGVLCELA 621 (780)
T ss_dssp HHHHHGGGCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHh
Confidence 99999999999999998888877654
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.003 Score=68.02 Aligned_cols=31 Identities=10% Similarity=0.145 Sum_probs=28.1
Q ss_pred cCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 180 DADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 180 ~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
...++|||+++.||+++.++.+.|+||+.+.
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 4679999999999999888899999999874
|
| >1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0018 Score=69.59 Aligned_cols=147 Identities=12% Similarity=0.163 Sum_probs=110.8
Q ss_pred hhhhhhh-ccccCCHHHHHHHHHHHHHHHccC---ChHHHhHhHHHHHHhhcC-CCcHHHHHHHHHHHHHhcccCCc---
Q psy3914 396 IVPCVVK-LFGSNDRATRSRLLLQLEHFIGHV---PDAIVNEQIFQQVALGFL-DTNPTIREQTVKSIIHLAPKLNY--- 467 (852)
Q Consensus 396 i~P~i~~-LF~~~dr~iR~~LL~~L~~~~~~l---~~~~v~~~I~P~l~~g~~-D~~~~iRe~tlksi~~l~~kl~~--- 467 (852)
.+|.++. +..++++.+|...+.-|..++..- ....+....+|.|+..+. +.++.||+.++.++-.|+.--..
T Consensus 82 ~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~ 161 (296)
T 1xqr_A 82 GMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLL 161 (296)
T ss_dssp HHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHH
Confidence 3566677 888888988877777777776542 234556678999999998 45889999999999988753222
Q ss_pred cchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHH----HHHHHHhhccCCChHHHHHHHHHHHHHhhc
Q psy3914 468 NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV----LISAFSRAMRDPFPPARNAGVLALAATQQY 543 (852)
Q Consensus 468 ~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~v----Li~af~r~lkDp~~~~R~a~l~~l~~~~~~ 543 (852)
..+....++.|.++. .+.+..||..++-+|+.|+.. +++.+..+ .++.+..+|+.+...+|..++.+|..+...
T Consensus 162 ~~~~~ggi~~L~~lL-~~~d~~v~~~A~~aLs~L~~~-~~~~~~~vv~~g~i~~Lv~LL~~~d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 162 QFLRLDGFSVLMRAM-QQQVQKLKVKSAFLLQNLLVG-HPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHHHTTHHHHHHHHH-HSSCHHHHHHHHHHHHHHHHH-CGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHTT
T ss_pred HHHHCCCHHHHHHHH-cCCCHHHHHHHHHHHHHHHhC-ChHHHHHHHHcCCHHHHHHHHcCCChhHHHHHHHHHHHHHhC
Confidence 223345788888877 477899999999999999876 44443333 578889999999999999999999877665
Q ss_pred c
Q psy3914 544 F 544 (852)
Q Consensus 544 ~ 544 (852)
.
T Consensus 240 ~ 240 (296)
T 1xqr_A 240 F 240 (296)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0019 Score=78.62 Aligned_cols=177 Identities=11% Similarity=0.077 Sum_probs=122.1
Q ss_pred hhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCcc--ch-hhh
Q psy3914 397 VPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYN--NL-NVE 473 (852)
Q Consensus 397 ~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~--~l-~~~ 473 (852)
+|.++.....++..+|..+++-+... ....+....+|.|+..+.+.++.||+.++..+..|+..-..+ .+ ...
T Consensus 117 i~~lv~~L~~~~~~~r~~a~~~l~~~----~~~~i~~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~~~~~~~~i~~~~~ 192 (780)
T 2z6g_A 117 HPTNVQRLAEPSQMLKHAVVNLINYQ----DDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQ 192 (780)
T ss_dssp ---------CCSCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTSHHHHHHHTTCHH
T ss_pred HHHHHHHhcCccHHHHHHHHHHHHhh----hHHHHHhCCHHHHHHHHCCCCHHHHHHHHHHHHHHhCCChhHHHHHhccC
Confidence 45566666666666666655555422 334566788999999999999999999999999988653221 11 235
Q ss_pred HHHHHHHHhccCCCcceeeehhhhhcccccccCh--hhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccC-HH-HH
Q psy3914 474 TLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHP--QIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFL-LS-EV 549 (852)
Q Consensus 474 lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~--~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~-~~-~~ 549 (852)
+++.|.++...++++.+|.+++.+|.+|+..-.. .....-.++.+...|+++...+|..|+.+|..+..... .. .+
T Consensus 193 ~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~~~~~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~v 272 (780)
T 2z6g_A 193 MVSAIVRTMQNTNDVETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAV 272 (780)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTHHHHH
T ss_pred hHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhhHHHH
Confidence 6777776654456889999999999998765221 11222368899999999999999999999987766543 22 23
Q ss_pred -HHhHhhhhhhcccCCChhhHHHHHHHHH
Q psy3914 550 -AQRILPALCQLSTDPEKSVRDSAFKTIK 577 (852)
Q Consensus 550 -a~~ILP~L~~l~~D~~~~Vr~~a~~~i~ 577 (852)
...++|.|..++.+++..|+..+..++.
T Consensus 273 ~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~ 301 (780)
T 2z6g_A 273 RLAGGLQKMVALLNKTNVKFLAITTDCLQ 301 (780)
T ss_dssp HHTTHHHHHHHGGGCCCHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 3579999999999998888887766555
|
| >2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00081 Score=79.91 Aligned_cols=225 Identities=12% Similarity=0.042 Sum_probs=143.1
Q ss_pred cccchhhhHhhhhcCCC--cccchhhhhhhcccCChhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCC---hHH
Q psy3914 356 CHKVLPQLINAFEYGEA--GASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVP---DAI 430 (852)
Q Consensus 356 ~~kiLP~Ll~~~e~~~~--~~~vL~~llki~~~l~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~---~~~ 430 (852)
...++|.|+..+..+.. ...++..+..++..-...+....++|.|++++...|..+|.....-|..+...-+ ...
T Consensus 222 ~~g~l~~L~~ll~~~~~~~~~~a~~~L~nL~~~~~~~~~~~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L~~~~~~~~~~v 301 (644)
T 2z6h_A 222 EAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMV 301 (644)
T ss_dssp HTTHHHHHHTTTTCSCHHHHHHHHHHHHHHGGGCTTCCSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 33456777766654321 1112233334444333334456789999999999999998776666665554321 223
Q ss_pred HhHhHHHHHHhhcCCC--cHHHHHHHHHHHHHhcccCCcc------chhhhHHHHHHHHhccCCCcceeeehhhhhcccc
Q psy3914 431 VNEQIFQQVALGFLDT--NPTIREQTVKSIIHLAPKLNYN------NLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIA 502 (852)
Q Consensus 431 v~~~I~P~l~~g~~D~--~~~iRe~tlksi~~l~~kl~~~------~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia 502 (852)
+....+|.|+..+.+. .+.||+.++..+-.|+..-.+. .+....++.|.++...+..+.||..++-+|++|+
T Consensus 302 ~~~g~v~~Lv~lL~~~~~~~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~~~l~~L~~lL~~~~~~~v~~~a~~~L~nLa 381 (644)
T 2z6h_A 302 CQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLA 381 (644)
T ss_dssp HHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTHHHHHHHTTSTTCCHHHHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHccCCcHHHHHHHHHHHHHHhcCCchHHHHHHHHHHccChHHHHHHhCccCchHHHHHHHHHHHHHc
Confidence 4445788888888753 3799999999999997543321 2334578888888743345789999999999998
Q ss_pred cccCh--hhHHHHHHHHHHhhccCCChH----------------------HHHHHHHHHHHHhhccC-HHH-HHHhHhhh
Q psy3914 503 HHLHP--QIRQKVLISAFSRAMRDPFPP----------------------ARNAGVLALAATQQYFL-LSE-VAQRILPA 556 (852)
Q Consensus 503 ~~L~~--~~~~~vLi~af~r~lkDp~~~----------------------~R~a~l~~l~~~~~~~~-~~~-~a~~ILP~ 556 (852)
..-.. .....-+++.+...++++... .+.+++.+|..+...-. ... ....++|.
T Consensus 382 ~~~~~~~~i~~~~~i~~Lv~lL~~~~~~vr~~a~~al~n~~~~~~~~~~~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~ 461 (644)
T 2z6h_A 382 LCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPL 461 (644)
T ss_dssp TSGGGHHHHHHTTHHHHHHHHHHHHHHHHTTC----------CCSSCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHH
T ss_pred cCHHHHHHHHHcCCHHHHHHHHhccchhhhhHhhhccccchhcccccHHHHHHHHHHHHHHHhcCHHHHHHHHhCCcHHH
Confidence 64211 122333577777777764333 34445555543332111 112 24568999
Q ss_pred hhhcccCCChhhHHHHHHHHHHHH
Q psy3914 557 LCQLSTDPEKSVRDSAFKTIKGFL 580 (852)
Q Consensus 557 L~~l~~D~~~~Vr~~a~~~i~~~l 580 (852)
|+.++.+.+.+|+..|..++..+.
T Consensus 462 Lv~lL~~~~~~v~~~a~~aL~~l~ 485 (644)
T 2z6h_A 462 FVQLLYSPIENIQRVAAGVLCELA 485 (644)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHH
Confidence 999999999999998888776654
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0032 Score=70.04 Aligned_cols=72 Identities=10% Similarity=-0.067 Sum_probs=46.6
Q ss_pred eccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---------CchHHHHHHHHHHHhCCC--C-CcceEeeeE
Q psy3914 59 GEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---------DTYEPALSYVKKLKTLRH--P-SILTFLDSV 126 (852)
Q Consensus 59 ~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---------~~~~~~~~E~~~Lk~LrH--P-nIlk~~d~~ 126 (852)
.+.+| .|..+.||+++...++..|+||..... .....+.+|.+.|+.+.+ | .+.+++.+.
T Consensus 35 ~~~lg--------~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d 106 (397)
T 2olc_A 35 CQEIG--------DGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD 106 (397)
T ss_dssp EEECC--------SSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE
T ss_pred EEECC--------CCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc
Confidence 45677 788899999976656788999976431 123456788888887742 3 344566542
Q ss_pred EcCCCCeEEEEEeecc
Q psy3914 127 ESPSKSLVYLAVEYVE 142 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~ 142 (852)
. ...++|||++.
T Consensus 107 --~--~~~~lvmE~l~ 118 (397)
T 2olc_A 107 --T--EMAVTVMEDLS 118 (397)
T ss_dssp --T--TTTEEEECCCT
T ss_pred --C--CccEEEEEeCC
Confidence 2 34589999986
|
| >3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0046 Score=68.11 Aligned_cols=186 Identities=7% Similarity=0.018 Sum_probs=131.6
Q ss_pred hhhhhhhccccCCHHHHHHHHHHHHHHHccCC----hHHHhHhHHHHHHhh-cCCCcHHHHHHHHHHHHHhcccCCc---
Q psy3914 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVP----DAIVNEQIFQQVALG-FLDTNPTIREQTVKSIIHLAPKLNY--- 467 (852)
Q Consensus 396 i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~----~~~v~~~I~P~l~~g-~~D~~~~iRe~tlksi~~l~~kl~~--- 467 (852)
++|.++.|..+.+..++.....-|..+...-+ ...+..-.+|.|+.. ....++.+++.++..+-.|+..-++
T Consensus 128 aIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~ 207 (354)
T 3nmw_A 128 CMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKA 207 (354)
T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHCCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhhH
Confidence 58999999999998887554444444443311 223344568999886 4556788999988888887753222
Q ss_pred cch-hhhHHHHHHHHhccCCCc---ceeeehhhhhccccccc--ChhhHHHH----HHHHHHhhccCCChHHHHHHHHHH
Q psy3914 468 NNL-NVETLRHFARLQAKDDQG---GIRTNTTVCVGKIAHHL--HPQIRQKV----LISAFSRAMRDPFPPARNAGVLAL 537 (852)
Q Consensus 468 ~~l-~~~lL~~l~kl~~~D~~~---~IR~nt~iclgkia~~L--~~~~~~~v----Li~af~r~lkDp~~~~R~a~l~~l 537 (852)
... ....++.|.++...+... .|+.+++-+|..|+.++ +++.++.+ .+|.+...|+++...++..|+.+|
T Consensus 208 ~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL 287 (354)
T 3nmw_A 208 DICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTL 287 (354)
T ss_dssp HHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred HHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHHHHH
Confidence 122 345688888876422221 48889999999988753 45555554 478999999999999999999888
Q ss_pred HHHhhccCHH----HHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHH
Q psy3914 538 AATQQYFLLS----EVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGK 582 (852)
Q Consensus 538 ~~~~~~~~~~----~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~ 582 (852)
..+... +.+ .+..-++|.|+.++..++..+|..|..++..++..
T Consensus 288 ~nLa~~-~~~~~~~i~~~G~i~~Lv~LL~s~~~~i~~~A~~aL~nL~~~ 335 (354)
T 3nmw_A 288 WNLSAR-NPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMAN 335 (354)
T ss_dssp HHHTSS-CHHHHHHHHHTTHHHHHHTTTTCSSHHHHHHHHHHHHHHHTT
T ss_pred HHHhCC-CHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcC
Confidence 766421 222 24456799999999999999999999999988765
|
| >1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00014 Score=67.92 Aligned_cols=121 Identities=15% Similarity=0.147 Sum_probs=82.4
Q ss_pred hhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchh
Q psy3914 392 YQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLN 471 (852)
Q Consensus 392 f~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~ 471 (852)
+...-+|.+..++.++++.+|...+..|..+ ... . +|.|+..+.|.++.||..++.++-.+..
T Consensus 9 ~~~~~~~~l~~~L~~~~~~vR~~A~~~L~~~----~~~----~-~~~L~~~L~d~~~~vR~~A~~aL~~~~~-------- 71 (131)
T 1te4_A 9 HHSSGLVPRGSHMADENKWVRRDVSTALSRM----GDE----A-FEPLLESLSNEDWRIRGAAAWIIGNFQD-------- 71 (131)
T ss_dssp ------------CCSSCCCSSSSCCSSTTSC----SST----T-HHHHHHGGGCSCHHHHHHHHHHHGGGCS--------
T ss_pred cccccHHHHHHHhcCCCHHHHHHHHHHHHHh----Cch----H-HHHHHHHHcCCCHHHHHHHHHHHHhcCC--------
Confidence 3444567778888888888886544443322 221 1 4888899999999999999998866542
Q ss_pred hhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHH
Q psy3914 472 VETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALA 538 (852)
Q Consensus 472 ~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~ 538 (852)
...++.|.++. +|+++.||..++..||++.. ...++++...++|+...+|.+++.+|.
T Consensus 72 ~~a~~~L~~~L-~d~~~~VR~~A~~aL~~~~~--------~~a~~~L~~~l~d~~~~vr~~A~~aL~ 129 (131)
T 1te4_A 72 ERAVEPLIKLL-EDDSGFVRSGAARSLEQIGG--------ERVRAAMEKLAETGTGFARKVAVNYLE 129 (131)
T ss_dssp HHHHHHHHHHH-HHCCTHHHHHHHHHHHHHCS--------HHHHHHHHHHTTSCCTHHHHHHHHHGG
T ss_pred HHHHHHHHHHH-cCCCHHHHHHHHHHHHHhCc--------HHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 34567776666 59999999999999998862 234677888899999999999988764
|
| >3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.006 Score=69.51 Aligned_cols=186 Identities=7% Similarity=0.007 Sum_probs=131.5
Q ss_pred chhhhhhhccccCCHHHHHHHHHHHHHHHccCC----hHHHhHhHHHHHHhh-cCCCcHHHHHHHHHHHHHhcccCCc--
Q psy3914 395 KIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVP----DAIVNEQIFQQVALG-FLDTNPTIREQTVKSIIHLAPKLNY-- 467 (852)
Q Consensus 395 ~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~----~~~v~~~I~P~l~~g-~~D~~~~iRe~tlksi~~l~~kl~~-- 467 (852)
-++|.|+.|+.+.+..++.....-|..+...-+ ...+..-.+|.|+.. ....++.+++.++..+-.|+..-++
T Consensus 243 GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk 322 (458)
T 3nmz_A 243 GCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENK 322 (458)
T ss_dssp HHHHHHHHGGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHH
T ss_pred CcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHHH
Confidence 358999999999999887655555554544312 223344568899986 4556889999988888777652211
Q ss_pred -cch-hhhHHHHHHHHhccCCCc---ceeeehhhhhcccccc--cChhhHHHH----HHHHHHhhccCCChHHHHHHHHH
Q psy3914 468 -NNL-NVETLRHFARLQAKDDQG---GIRTNTTVCVGKIAHH--LHPQIRQKV----LISAFSRAMRDPFPPARNAGVLA 536 (852)
Q Consensus 468 -~~l-~~~lL~~l~kl~~~D~~~---~IR~nt~iclgkia~~--L~~~~~~~v----Li~af~r~lkDp~~~~R~a~l~~ 536 (852)
... ....++.|.++.....+. .|+.+++-+|..|+.+ -+++.++.+ .+|.+...|+++...++..|+.+
T Consensus 323 ~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~a 402 (458)
T 3nmz_A 323 ADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGT 402 (458)
T ss_dssp HHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSCHHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCCChHHHHHHHHH
Confidence 122 345688888876422222 4889999999998875 344555544 47889999999999999999988
Q ss_pred HHHHhhccCHH----HHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHH
Q psy3914 537 LAATQQYFLLS----EVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLG 581 (852)
Q Consensus 537 l~~~~~~~~~~----~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~ 581 (852)
|..+... +.+ .+..-++|.|+.++..++..+|..|..++..++.
T Consensus 403 L~nLa~~-~~~~~~~i~~~G~I~~Lv~LL~s~~~~v~~~Aa~AL~nL~~ 450 (458)
T 3nmz_A 403 LWNLSAR-NPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMA 450 (458)
T ss_dssp HHHHHSS-CHHHHHHHHHHTHHHHHHTTTTCSSHHHHHHHHHHHHHHHT
T ss_pred HHHHHcC-CHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHc
Confidence 8765421 222 3446789999999999999999999999988865
|
| >3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0055 Score=74.37 Aligned_cols=184 Identities=9% Similarity=0.074 Sum_probs=133.5
Q ss_pred chhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHh-----HhHHHHHHhhcCCC-cHHHHHHHHHHHHHhcccC---
Q psy3914 395 KIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVN-----EQIFQQVALGFLDT-NPTIREQTVKSIIHLAPKL--- 465 (852)
Q Consensus 395 ~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~-----~~I~P~l~~g~~D~-~~~iRe~tlksi~~l~~kl--- 465 (852)
-++|.|+.|+.+.+..+|.....-|..+....+++.+- ..++|.|+..+... ....+..++.++-.|+.-=
T Consensus 536 Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~ 615 (810)
T 3now_A 536 GGVKALLRMALEGTEKGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESV 615 (810)
T ss_dssp THHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHH
T ss_pred CCHHHHHHHHccCCHHHHHHHHHHHHHHhcCCChhhhhcchhhhcHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHH
Confidence 35799999998888877765555555555444444321 23789999888754 4455667888888887542
Q ss_pred CccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHH-----HHHHHHhhccCCChHHHHHHHHHHHHH
Q psy3914 466 NYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV-----LISAFSRAMRDPFPPARNAGVLALAAT 540 (852)
Q Consensus 466 ~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~v-----Li~af~r~lkDp~~~~R~a~l~~l~~~ 540 (852)
....+....++.|..++. +....||.+++-||+.|+.. ++.+... .++.+..++..+...+|.+|..+|..+
T Consensus 616 ~~~Ii~aG~l~~Lv~LL~-s~~~~Vq~~A~~~L~NLa~~--~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanL 692 (810)
T 3now_A 616 RQRIIKEQGVSKIEYYLM-EDHLYLTRAAAQCLCNLVMS--EDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAII 692 (810)
T ss_dssp HHHHHHTTHHHHHHHHHH-SCCTTHHHHHHHHHHHHTTS--HHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHc-CCCHHHHHHHHHHHHHHhCC--hHHHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 223344456888888874 78899999999999999973 4443333 367888889888899999999988766
Q ss_pred hhccC--HHHHH--HhHhhhhhhcccCCChhhHHHHHHHHHHHHH
Q psy3914 541 QQYFL--LSEVA--QRILPALCQLSTDPEKSVRDSAFKTIKGFLG 581 (852)
Q Consensus 541 ~~~~~--~~~~a--~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~ 581 (852)
..... ...+. ...+|.|+.++.+++..||..|..+|..++.
T Consensus 693 t~~s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~ 737 (810)
T 3now_A 693 TSVSVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMIN 737 (810)
T ss_dssp HHHCHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHT
T ss_pred hCCCHHHHHHHHHHcCCHHHHHHHHCCCCHHHHHHHHHHHHHHHh
Confidence 55322 23344 4799999999999999999999999988775
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0013 Score=71.92 Aligned_cols=71 Identities=7% Similarity=-0.050 Sum_probs=46.5
Q ss_pred cCCceEEEEEEEc--C----CCeEEEEEEEeCCC-----chHHHHHHHHHHHhCC-C--CCcceEeeeEEcCC-CCeEEE
Q psy3914 72 KHTFWKFHGGKKK--G----SNEKVTIFLNDSAD-----TYEPALSYVKKLKTLR-H--PSILTFLDSVESPS-KSLVYL 136 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k--~----~g~~VaVKv~~~~~-----~~~~~~~E~~~Lk~Lr-H--PnIlk~~d~~e~~~-~~~~yI 136 (852)
.|....+|+.... . ++..+.+|+..... ....+.+|+..|+.|. + ..+.+++.+..+.. -+..|+
T Consensus 31 ~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~ 110 (357)
T 3ats_A 31 TGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFF 110 (357)
T ss_dssp TSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEE
T ss_pred CCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceE
Confidence 5677788887653 1 15678888765421 1245788888888875 3 35677777765431 134688
Q ss_pred EEeecc
Q psy3914 137 AVEYVE 142 (852)
Q Consensus 137 VtE~v~ 142 (852)
|||++.
T Consensus 111 v~e~l~ 116 (357)
T 3ats_A 111 LMDYVE 116 (357)
T ss_dssp EEECCC
T ss_pred EEEecC
Confidence 999987
|
| >2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0045 Score=76.32 Aligned_cols=214 Identities=9% Similarity=0.149 Sum_probs=145.5
Q ss_pred chhhhHhhhhcCCC--cccchhhhhhhcccCChhhhhcchhhhhhhccccC-CHHHHHHHHHHHHHHHccCChHHHhH--
Q psy3914 359 VLPQLINAFEYGEA--GASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSN-DRATRSRLLLQLEHFIGHVPDAIVNE-- 433 (852)
Q Consensus 359 iLP~Ll~~~e~~~~--~~~vL~~llki~~~l~~~ef~~~i~P~i~~LF~~~-dr~iR~~LL~~L~~~~~~l~~~~v~~-- 433 (852)
+||.++..+-..+. ..+.-..+..|.+.++.+.- ..++|.|...+... .-+.++..|.-|..+++.. ++.+..
T Consensus 96 ~~~~~~~~~~dk~~~v~~aa~~~~~~~~~~~~~~a~-~~~~~~~~~~~~~~~kw~~k~~~l~~~~~~~~~~-~~~~~~~~ 173 (986)
T 2iw3_A 96 LVPAICTNAGNKDKEIQSVASETLISIVNAVNPVAI-KALLPHLTNAIVETNKWQEKIAILAAFSAMVDAA-KDQVALRM 173 (986)
T ss_dssp THHHHHHHTTCSSHHHHHHHHHHHHHHHHHSCGGGH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHS-HHHHHHHH
T ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHhCCHHHH-HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh-HHHHHHhc
Confidence 57777777654321 12223345556677777665 88999998888655 5788999999999999877 444433
Q ss_pred -hHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccc--cCh--h
Q psy3914 434 -QIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHH--LHP--Q 508 (852)
Q Consensus 434 -~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~--L~~--~ 508 (852)
.|+|.+..++-|+.+.|..++.+.|..++..++-+.+.. .+|.|.+... ++ ..+-.|+.+++.. +.. .
T Consensus 174 ~~~~p~~~~~~~d~k~~v~~~~~~~~~~~~~~~~n~d~~~-~~~~~~~~~~-~p-----~~~~~~~~~l~~~tfv~~v~~ 246 (986)
T 2iw3_A 174 PELIPVLSETMWDTKKEVKAAATAAMTKATETVDNKDIER-FIPSLIQCIA-DP-----TEVPETVHLLGATTFVAEVTP 246 (986)
T ss_dssp HHHHHHHHHHTTCSSHHHHHHHHHHHHHHGGGCCCTTTGG-GHHHHHHHHH-CT-----THHHHHHHHHTTCCCCSCCCH
T ss_pred cchhcchHhhcccCcHHHHHHHHHHHHHHHhcCCCcchhh-hHHHHHHHhc-Ch-----hhhHHHHHHhhcCeeEeeecc
Confidence 689999999999999999999999999999998444322 2344444432 44 3478888887753 111 2
Q ss_pred hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhccc-----CCChhhHHHHHHHHHHHHH
Q psy3914 509 IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLST-----DPEKSVRDSAFKTIKGFLG 581 (852)
Q Consensus 509 ~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~-----D~~~~Vr~~a~~~i~~~l~ 581 (852)
-.--+|+|.+.|.|++.....+--+..-+.-.++..+-...+.-.||.|.|-+- =..+.+|.-+-+++..+..
T Consensus 247 ~~l~~~~p~l~r~l~~~~~~~~r~~~~~~~n~~~lv~~~~~~~~f~~~l~p~~~~~~~~~~~pe~r~~~~~a~~~l~~ 324 (986)
T 2iw3_A 247 ATLSIMVPLLSRGLNERETGIKRKSAVIIDNMCKLVEDPQVIAPFLGKLLPGLKSNFATIADPEAREVTLRALKTLRR 324 (986)
T ss_dssp HHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHTTCCCHHHHHHHHTTTHHHHHHHTTTCCSHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhhhccCcchhheeeEEEEcchhhhcCCHHHHhhhhhhhhhHHHHHhhccCCHHHHHHHHHHHHHHHH
Confidence 235588999999999998887555555566666666655555666666666543 1234588766666555433
|
| >1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0035 Score=74.27 Aligned_cols=182 Identities=14% Similarity=0.091 Sum_probs=121.5
Q ss_pred hhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchh
Q psy3914 392 YQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLN 471 (852)
Q Consensus 392 f~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~ 471 (852)
.....+..+.++..+.|+.+|+..|..|..++.+- +..+ ...++.++.++.|.+..||..++..+..++..=+...+-
T Consensus 310 l~~~a~~~L~~~L~~~d~~vr~~aL~~L~~i~~~~-p~~~-~~~~~~i~~~l~d~d~~Ir~~alelL~~l~~~~nv~~iv 387 (618)
T 1w63_A 310 LRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTD-HNAV-QRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMM 387 (618)
T ss_dssp HHHHHHHHHHHHHTCSSTTTHHHHHHHHHHHHHHH-HHHH-GGGHHHHHHGGGSSCHHHHHHHHHHHHHHCCSSSTHHHH
T ss_pred HHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhhC-HHHH-HHHHHHHHHHccCCChhHHHHHHHHHHHHcccccHHHHH
Confidence 33456778888888899999999999999988763 3333 345678888999999999999999998888754433344
Q ss_pred hhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHH
Q psy3914 472 VETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQ 551 (852)
Q Consensus 472 ~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~ 551 (852)
.+++.++. +.+..+|..++.+||+++..+.+.. .-.++.+...+++....++..++..+......+. ++..
T Consensus 388 ~eL~~~l~-----~~d~e~r~~~v~~I~~la~k~~~~~--~~~v~~ll~lL~~~~~~v~~~~~~~l~~ii~~~p--~l~~ 458 (618)
T 1w63_A 388 KELLYFLD-----SCEPEFKADCASGIFLAAEKYAPSK--RWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSV--EMHA 458 (618)
T ss_dssp HHHHHHHH-----HCCHHHHHHHHHHHHHHHHSSCCCH--HHHHHHHHHHHHHTGGGSCSSHHHHHHHHHHHSC--STHH
T ss_pred HHHHHHHH-----hCCHHHHHHHHHHHHHHHHHhCccH--HHHHHHHHHHHHhccchhHHHHHHHHHHHHhcCh--hHHH
Confidence 44444443 5567899999999999999886532 2234556666665544455445555554444443 2233
Q ss_pred hHhhhhhhcccC---CChhhHHHHHHHHHHHHHHHhh
Q psy3914 552 RILPALCQLSTD---PEKSVRDSAFKTIKGFLGKLEQ 585 (852)
Q Consensus 552 ~ILP~L~~l~~D---~~~~Vr~~a~~~i~~~l~~le~ 585 (852)
.+++.|+.++-+ .+..+ ..+.-+|.+|...+..
T Consensus 459 ~~v~~L~~~l~~~~~~~~~~-~~~~wilGEy~~~i~~ 494 (618)
T 1w63_A 459 YTVQRLYKAILGDYSQQPLV-QVAAWCIGEYGDLLVS 494 (618)
T ss_dssp HHHHHHHHHHHHCCSCSHHH-HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcccccHHHH-HHHHHHHhhhHHHhcc
Confidence 445555555543 23333 3577788888887754
|
| >2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A | Back alignment and structure |
|---|
Probab=96.71 E-value=0.015 Score=68.92 Aligned_cols=139 Identities=12% Similarity=0.144 Sum_probs=96.6
Q ss_pred hhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHH
Q psy3914 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETL 475 (852)
Q Consensus 396 i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL 475 (852)
..+.+++++++++...|-..--.+..|++.- + ++---+...|...+.|.++.+|-.++++|-.+.. ..+-..++
T Consensus 75 ~~~~vvkl~~s~~~~~Krl~YL~l~~~~~~~-~-e~~~L~iN~l~kDl~~~n~~ir~lALr~L~~i~~----~e~~~~l~ 148 (621)
T 2vgl_A 75 GHMEAVNLLSSNRYTEKQIGYLFISVLVNSN-S-ELIRLINNAIKNDLASRNPTFMGLALHCIANVGS----REMAEAFA 148 (621)
T ss_dssp CHHHHHHGGGCSCHHHHHHHHHHHHHSCCCC-H-HHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCC----HHHHHHHT
T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHccCC-c-HHHHHHHHHHHHhcCCCCHHHHHHHHHHhhccCC----HHHHHHHH
Confidence 4567778888888877644444444444332 2 2223455677788888899999999988887753 44566778
Q ss_pred HHHHHHhc-cCCCcceeeehhhhhcccccccChhhHH-HHHHHHHHhhccCCChHHHHHHHHHHHHHh
Q psy3914 476 RHFARLQA-KDDQGGIRTNTTVCVGKIAHHLHPQIRQ-KVLISAFSRAMRDPFPPARNAGVLALAATQ 541 (852)
Q Consensus 476 ~~l~kl~~-~D~~~~IR~nt~iclgkia~~L~~~~~~-~vLi~af~r~lkDp~~~~R~a~l~~l~~~~ 541 (852)
+.+.++.. .|..+.||-++++|+.+|.. ++++... ..+++.+.++|.|+.+.++.+|+.++..+.
T Consensus 149 ~~v~~~l~~~d~~~~VRK~A~~al~kl~~-~~p~~~~~~~~~~~l~~lL~d~d~~V~~~a~~~l~~i~ 215 (621)
T 2vgl_A 149 GEIPKILVAGDTMDSVKQSAALCLLRLYR-TSPDLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLA 215 (621)
T ss_dssp THHHHHHHCSSSCHHHHHHHHHHHHHHHH-HCGGGCCCCSCHHHHHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHHH-hChhhcCchhHHHHHHHHhCCCCccHHHHHHHHHHHHH
Confidence 88777751 48888999999999888887 5555433 256677777888888888888887765543
|
| >1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0053 Score=76.46 Aligned_cols=172 Identities=11% Similarity=0.029 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcC------CCcHHHHHHHHHHHHHhcccCC-----cc------chhh
Q psy3914 410 ATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFL------DTNPTIREQTVKSIIHLAPKLN-----YN------NLNV 472 (852)
Q Consensus 410 ~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~------D~~~~iRe~tlksi~~l~~kl~-----~~------~l~~ 472 (852)
..|.+..+-|..++.++. +.+...+++.+...+. +.++..||+++..+-.++.+.. .. .+..
T Consensus 376 s~R~aa~~~L~~l~~~~~-~~v~~~~l~~i~~~l~~~~~~~~~~w~~reaal~algaia~~~~~~~~~~~~~~~~~~l~~ 454 (960)
T 1wa5_C 376 TRRRACTDFLKELKEKNE-VLVTNIFLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVD 454 (960)
T ss_dssp CHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCHHH
T ss_pred CcHHHHHHHHHHHHHHcc-hhHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHhccccCCcccccccccHHH
Confidence 467788888888888887 6677788888777666 5678999999999998886542 11 2222
Q ss_pred hHHHHHHHHhccCC---CcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhc------
Q psy3914 473 ETLRHFARLQAKDD---QGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQY------ 543 (852)
Q Consensus 473 ~lL~~l~kl~~~D~---~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~------ 543 (852)
-+..++.-.. .|+ .+.||..++.|||+++..+.++. ...+++++.+.+.|+..++|.+|..+|..+.+.
T Consensus 455 ~l~~~v~p~l-~~~~~~~p~vr~~a~~~lg~~~~~~~~~~-l~~~l~~l~~~L~d~~~~V~~~A~~Al~~~~~~~~~~~~ 532 (960)
T 1wa5_C 455 FFTKEIAPDL-TSNNIPHIILRVDAIKYIYTFRNQLTKAQ-LIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTS 532 (960)
T ss_dssp HHHHHTHHHH-HCSSCSCHHHHHHHHHHHHHTGGGSCHHH-HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSS
T ss_pred HHHHHhHHHh-cCCCCCCceehHHHHHHHHHHHhhCCHHH-HHHHHHHHHHHhCCCChhHHHHHHHHHHHHHhccccccc
Confidence 1122221111 355 89999999999999999997654 445567888889999999999999999987663
Q ss_pred ----cCHHH---HHHhHhhhhhhcccCCC-----hhhHHHHHHHHHHHHHHHh
Q psy3914 544 ----FLLSE---VAQRILPALCQLSTDPE-----KSVRDSAFKTIKGFLGKLE 584 (852)
Q Consensus 544 ----~~~~~---~a~~ILP~L~~l~~D~~-----~~Vr~~a~~~i~~~l~~le 584 (852)
|..+. .+..||..|..++-... ......++++|..++...+
T Consensus 533 ~~~~~~~~~l~p~l~~ll~~L~~ll~~~~~~~~~~~~~e~l~~al~~vv~~~~ 585 (960)
T 1wa5_C 533 PAFIFHKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSE 585 (960)
T ss_dssp CCBSSCGGGTTTTHHHHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHHT
T ss_pred ccccccHHHhhhhHHHHHHHHHHHHHhccCCCCcccccHHHHHHHHHHHHHHH
Confidence 22222 33445555555544321 1133456666666655543
|
| >4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0068 Score=64.01 Aligned_cols=148 Identities=7% Similarity=0.046 Sum_probs=106.6
Q ss_pred hhhhhhhccccCCHHHHHHHHHHHHHHHccCChH--------HHhHhHHHHHHh-hcCCCcHHHHHHHHHHHHHhcccCC
Q psy3914 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDA--------IVNEQIFQQVAL-GFLDTNPTIREQTVKSIIHLAPKLN 466 (852)
Q Consensus 396 i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~--------~v~~~I~P~l~~-g~~D~~~~iRe~tlksi~~l~~kl~ 466 (852)
+.+.+.+.+......+...-|+-+..|+..+... .+-..++|.|+. ++.|..+.+|+.++..+..++....
T Consensus 56 ~~~~lkk~l~DsN~~v~~~al~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~ 135 (278)
T 4ffb_C 56 DPTLFAQYITDSNVVAQEQAIVALNSLIDAFASSSLKNAHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDT 135 (278)
T ss_dssp CTHHHHHHTTCSSHHHHHHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcC
Confidence 4566667776677777777778888888776533 234567887774 6899999999999999998886644
Q ss_pred ccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhH-----HHHHHHHHHhhccCCChHHHHHHHHHHHHHh
Q psy3914 467 YNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIR-----QKVLISAFSRAMRDPFPPARNAGVLALAATQ 541 (852)
Q Consensus 467 ~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~-----~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~ 541 (852)
.. ..++..+.... +...|.||..++.+|.++...++.... .+.+++.+...+.|+...+|.+|+..+..++
T Consensus 136 ~~---~~~~e~l~~~l-~~Knpkv~~~~l~~l~~~l~~fg~~~~~~k~~l~~i~~~l~k~l~d~~~~VR~aA~~l~~~ly 211 (278)
T 4ffb_C 136 SI---TQSVELVIPFF-EKKLPKLIAAAANCVYELMAAFGLTNVNVQTFLPELLKHVPQLAGHGDRNVRSQTMNLIVEIY 211 (278)
T ss_dssp SS---HHHHHHHGGGG-GCSCHHHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHGGGHHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred cH---HHHHHHHHHHH-hccCHHHHHHHHHHHHHHHHHhCCCcCCchhHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 32 23444444443 578899999999999999988776432 2335556677889999999999999999988
Q ss_pred hccCHH
Q psy3914 542 QYFLLS 547 (852)
Q Consensus 542 ~~~~~~ 547 (852)
.+++..
T Consensus 212 ~~~G~~ 217 (278)
T 4ffb_C 212 KVTGNN 217 (278)
T ss_dssp TC----
T ss_pred HHhCcc
Confidence 888744
|
| >3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.008 Score=72.93 Aligned_cols=186 Identities=7% Similarity=0.083 Sum_probs=130.4
Q ss_pred chhhhhhhccccCCHHHHHHHHHHHHHHHccCC-----------------------------------hHHHhHhHHHHH
Q psy3914 395 KIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVP-----------------------------------DAIVNEQIFQQV 439 (852)
Q Consensus 395 ~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~-----------------------------------~~~v~~~I~P~l 439 (852)
-++|.++.|..+.|..+.+..+.-|..+...-+ ...++.-.+|.|
T Consensus 421 g~Ip~LV~LL~s~d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp~L 500 (810)
T 3now_A 421 ASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGITTAL 500 (810)
T ss_dssp HHHHHHHHHHHTTCGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred chHHHHHHHhCCCChHHHHHHHHHHHHHcCCchhhhhhHHHHHHHHHhhccCccccccccHHHHHHHHHHHHHCcCHHHH
Confidence 468999999988888877665555555544211 233455679999
Q ss_pred HhhcCCCcHHHHHHHHHHHHHhcccCCc--cchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhH-----HH
Q psy3914 440 ALGFLDTNPTIREQTVKSIIHLAPKLNY--NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIR-----QK 512 (852)
Q Consensus 440 ~~g~~D~~~~iRe~tlksi~~l~~kl~~--~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~-----~~ 512 (852)
+..+...++.+|++++..+..|+.--.. ..+....+|.|..+. .+....+|.+++-+|++|+..-++... ..
T Consensus 501 V~LL~s~s~~vqe~Aa~aL~NLA~d~~~r~~Vv~~Gaip~Lv~LL-~s~~~~~k~~Aa~AL~nL~~~~~p~~~~~~~~~~ 579 (810)
T 3now_A 501 CALAKTESHNSQELIARVLNAVCGLKELRGKVVQEGGVKALLRMA-LEGTEKGKRHATQALARIGITINPEVSFSGQRSL 579 (810)
T ss_dssp HHHHTCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHH-HSSCHHHHHHHHHHHHHHHHHSCHHHHTTTHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHH-ccCCHHHHHHHHHHHHHHhcCCChhhhhcchhhh
Confidence 9999999999999999999999843111 112233478877776 366678899999999999877665431 11
Q ss_pred HHHHHHHhhccCC-ChHHHHHHHHHHHHHhhc---cCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHH
Q psy3914 513 VLISAFSRAMRDP-FPPARNAGVLALAATQQY---FLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLG 581 (852)
Q Consensus 513 vLi~af~r~lkDp-~~~~R~a~l~~l~~~~~~---~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~ 581 (852)
-.+|.+..+|... ....+..|+.+|.-+... .....+....+|.|..++.+.+..||..|..+|..+..
T Consensus 580 ~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~ 652 (810)
T 3now_A 580 DVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVM 652 (810)
T ss_dssp HTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhC
Confidence 2567888888633 444455677777654432 11123445689999999999999999999999988763
|
| >2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0072 Score=74.54 Aligned_cols=144 Identities=13% Similarity=0.183 Sum_probs=84.6
Q ss_pred HHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChh--hHHH
Q psy3914 435 IFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ--IRQK 512 (852)
Q Consensus 435 I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~--~~~~ 512 (852)
++|.++.++.|....||+++-.++..|+..++..-+ ..+||.+.........|..++.++-||++++...... .+-.
T Consensus 96 ~~~~~~~~~~dk~~~v~~aa~~~~~~~~~~~~~~a~-~~~~~~~~~~~~~~~kw~~k~~~l~~~~~~~~~~~~~~~~~~~ 174 (986)
T 2iw3_A 96 LVPAICTNAGNKDKEIQSVASETLISIVNAVNPVAI-KALLPHLTNAIVETNKWQEKIAILAAFSAMVDAAKDQVALRMP 174 (986)
T ss_dssp THHHHHHHTTCSSHHHHHHHHHHHHHHHHHSCGGGH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHhCCHHHH-HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhHHHHHHhcc
Confidence 456666666666666666666666666666666554 4556665544422334666666666666666554222 2333
Q ss_pred HHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHH-------------------------------------HHhHhh
Q psy3914 513 VLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEV-------------------------------------AQRILP 555 (852)
Q Consensus 513 vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~-------------------------------------a~~ILP 555 (852)
.+||.++..+-|.-+++..+|..++.+++.+.+..++ -.-+.|
T Consensus 175 ~~~p~~~~~~~d~k~~v~~~~~~~~~~~~~~~~n~d~~~~~~~~~~~~~~p~~~~~~~~~l~~~tfv~~v~~~~l~~~~p 254 (986)
T 2iw3_A 175 ELIPVLSETMWDTKKEVKAAATAAMTKATETVDNKDIERFIPSLIQCIADPTEVPETVHLLGATTFVAEVTPATLSIMVP 254 (986)
T ss_dssp HHHHHHHHHTTCSSHHHHHHHHHHHHHHGGGCCCTTTGGGHHHHHHHHHCTTHHHHHHHHHTTCCCCSCCCHHHHHHHHH
T ss_pred chhcchHhhcccCcHHHHHHHHHHHHHHHhcCCCcchhhhHHHHHHHhcChhhhHHHHHHhhcCeeEeeecchhHHHHHH
Confidence 4566666666666666666666666666655543322 124556
Q ss_pred hhhhcccCCChhhHHHHHHHHHHH
Q psy3914 556 ALCQLSTDPEKSVRDSAFKTIKGF 579 (852)
Q Consensus 556 ~L~~l~~D~~~~Vr~~a~~~i~~~ 579 (852)
.|...+.+++-.++.++.-+|+.|
T Consensus 255 ~l~r~l~~~~~~~~r~~~~~~~n~ 278 (986)
T 2iw3_A 255 LLSRGLNERETGIKRKSAVIIDNM 278 (986)
T ss_dssp HHHHHHTSSSHHHHHHHHHHHHHH
T ss_pred HHHhhhccCcchhheeeEEEEcch
Confidence 666666666666666665555543
|
| >1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 | Back alignment and structure |
|---|
Probab=96.08 E-value=0.012 Score=66.79 Aligned_cols=183 Identities=7% Similarity=0.058 Sum_probs=121.5
Q ss_pred hhhhhhhccccCCHHHHHHHHHHHHHHHccCCh---HHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCC---ccc
Q psy3914 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPD---AIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLN---YNN 469 (852)
Q Consensus 396 i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~---~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~---~~~ 469 (852)
-+|.++.+..+.+..++...+..|..+..+-+. ..+..-.+|.|+..+.+.++.+|+.++.++..|+..=+ ...
T Consensus 3 ~l~~lv~~L~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i 82 (457)
T 1xm9_A 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 82 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 368888888888988887777777777644332 55666789999999999999999999999999886311 112
Q ss_pred hhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHH---HHHHHHHhhc--------cCCChH--------HH
Q psy3914 470 LNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQK---VLISAFSRAM--------RDPFPP--------AR 530 (852)
Q Consensus 470 l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~---vLi~af~r~l--------kDp~~~--------~R 530 (852)
+....+|.|.++...+....+|.+++-+|+.|+.. ++.+.. -.+|.+.+.+ +++... ++
T Consensus 83 ~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~--~~~~~~i~~g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~ 160 (457)
T 1xm9_A 83 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST--DELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 160 (457)
T ss_dssp HHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTS--SSTHHHHHHHHHHHHHHHTTHHHHTCC---------CCCHHHH
T ss_pred HHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcC--HHhHHHHHhccHHHHHHHHhccccccccCccchhcccccHHHH
Confidence 23344888888874366789999999999999987 333333 4578888888 444333 33
Q ss_pred HHHHHHHHHHhhccC-HHHHHH--hHhhhhhhcccC------CChhhHHHHHHHHHHHH
Q psy3914 531 NAGVLALAATQQYFL-LSEVAQ--RILPALCQLSTD------PEKSVRDSAFKTIKGFL 580 (852)
Q Consensus 531 ~a~l~~l~~~~~~~~-~~~~a~--~ILP~L~~l~~D------~~~~Vr~~a~~~i~~~l 580 (852)
..++.+|..++..-. ...+.. -++|.|..++-+ ++..+...+..++..+.
T Consensus 161 ~~a~~aL~nLs~~~~~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~~~~~e~a~~~L~nLs 219 (457)
T 1xm9_A 161 FNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 219 (457)
T ss_dssp HHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccCHHHHHHHHHcCCCHHHHHHHHHhhccccCCchHHHHHHHHHHHhcc
Confidence 366677766554300 112332 577888877753 34445555665555543
|
| >2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.019 Score=60.42 Aligned_cols=136 Identities=11% Similarity=0.076 Sum_probs=98.7
Q ss_pred hccccCCHHHHHHHHHHHHHHHccCChH------HHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHH
Q psy3914 402 KLFGSNDRATRSRLLLQLEHFIGHVPDA------IVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETL 475 (852)
Q Consensus 402 ~LF~~~dr~iR~~LL~~L~~~~~~l~~~------~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL 475 (852)
++| .+...+-...|+-|..++..|... .--..++|.|+.=+.|..+.||++.-..+..+..... -..++
T Consensus 95 r~~-d~N~~v~~~~L~~L~~l~~~l~~~~y~~~~~ea~~~lP~LveKlGd~k~~vR~~~r~il~~l~~v~~----~~~v~ 169 (266)
T 2of3_A 95 RFF-ETNPAALIKVLELCKVIVELIRDTETPMSQEEVSAFVPYLLLKTGEAKDNMRTSVRDIVNVLSDVVG----PLKMT 169 (266)
T ss_dssp HTT-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHC----HHHHH
T ss_pred HHh-CCCHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHCC----HHHHH
Confidence 444 445555556667666666554321 1234688999999999999999998776655554333 23466
Q ss_pred HHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHH---HHHHhhccCCChHHHHHHHHHHHHHhhccC
Q psy3914 476 RHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLI---SAFSRAMRDPFPPARNAGVLALAATQQYFL 545 (852)
Q Consensus 476 ~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi---~af~r~lkDp~~~~R~a~l~~l~~~~~~~~ 545 (852)
+++..-. +..++++|.-++-|++.+.+..|.. ....+ |.....+-|+...+|.||+.++...+...+
T Consensus 170 ~~l~~g~-ksKN~R~R~e~l~~l~~li~~~G~~--~~~~l~~~~~ia~ll~D~d~~VR~aAl~~lve~y~~~G 239 (266)
T 2of3_A 170 PMLLDAL-KSKNARQRSECLLVIEYYITNAGIS--PLKSLSVEKTVAPFVGDKDVNVRNAAINVLVACFKFEG 239 (266)
T ss_dssp HHHHHGG-GCSCHHHHHHHHHHHHHHHHHHCSG--GGGGGCHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHH-ccCCHHHHHHHHHHHHHHHHhcCCC--ccccccchHHHHHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 6666533 6788999999999999999888876 23456 888899999999999999999887776655
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.032 Score=62.51 Aligned_cols=30 Identities=13% Similarity=0.153 Sum_probs=27.0
Q ss_pred cCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 180 DADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 180 ~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
...++|||++|.||+++.++ ++|+||+++.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~ 260 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSF 260 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccc
Confidence 56799999999999998877 9999999975
|
| >1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A | Back alignment and structure |
|---|
Probab=95.80 E-value=0.025 Score=70.28 Aligned_cols=133 Identities=12% Similarity=0.035 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhcc-----CCCcceeeehhhhhcccccccC-h----h------hHH
Q psy3914 448 PTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAK-----DDQGGIRTNTTVCVGKIAHHLH-P----Q------IRQ 511 (852)
Q Consensus 448 ~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~-----D~~~~IR~nt~iclgkia~~L~-~----~------~~~ 511 (852)
.++|-++...+..++..+. ..+-..+++++...... +.+|..|-.++.+||.|+..+. . . ...
T Consensus 375 ~s~R~aa~~~L~~l~~~~~-~~v~~~~l~~i~~~l~~~~~~~~~~w~~reaal~algaia~~~~~~~~~~~~~~~~~~l~ 453 (960)
T 1wa5_C 375 DTRRRACTDFLKELKEKNE-VLVTNIFLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVV 453 (960)
T ss_dssp -CHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCHH
T ss_pred cCcHHHHHHHHHHHHHHcc-hhHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHhccccCCcccccccccHH
Confidence 4788888888888888877 44455567776554421 5678999999999999986531 1 1 111
Q ss_pred HHHHHHHHhhccCC---ChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHH
Q psy3914 512 KVLISAFSRAMRDP---FPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGK 582 (852)
Q Consensus 512 ~vLi~af~r~lkDp---~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~ 582 (852)
..|.......++|| .+.+|.+++..+..+.+.+. .+....+||.|...+.|+++.||..|..+|..|+..
T Consensus 454 ~~l~~~v~p~l~~~~~~~p~vr~~a~~~lg~~~~~~~-~~~l~~~l~~l~~~L~d~~~~V~~~A~~Al~~~~~~ 526 (960)
T 1wa5_C 454 DFFTKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQLT-KAQLIELMPILATFLQTDEYVVYTYAAITIEKILTI 526 (960)
T ss_dssp HHHHHHTHHHHHCSSCSCHHHHHHHHHHHHHTGGGSC-HHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhHHHhcCCCCCCceehHHHHHHHHHHHhhCC-HHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHhc
Confidence 22222233345787 88999999999999988886 457889999999999999999999999999988764
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.03 Score=60.52 Aligned_cols=66 Identities=11% Similarity=0.020 Sum_probs=52.4
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCC---CCCcceEeeeEEcCCCCeEEEEEeecc
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLR---HPSILTFLDSVESPSKSLVYLAVEYVE 142 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~Lr---HPnIlk~~d~~e~~~~~~~yIVtE~v~ 142 (852)
.|.+..+|+... ++..+.||+... .....+..|+..|+.|. ...|.+++...... +..|+|||++.
T Consensus 46 gG~~n~~y~v~~--~~~~~vlK~~~~-~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~--g~~~lvme~l~ 114 (312)
T 3jr1_A 46 SGEMNEIWLIND--EVQTVFVKINER-SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ--GHSFLLLEALN 114 (312)
T ss_dssp CSSSSEEEEEES--SSCEEEEEEEEG-GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS--SEEEEEEECCC
T ss_pred CccceeeeEEEE--CCCeEEEEeCCc-ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC--CceEEEEEecc
Confidence 677888998875 567888998875 34567889988888884 35688888888776 78999999997
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=95.73 E-value=0.02 Score=61.00 Aligned_cols=28 Identities=11% Similarity=0.044 Sum_probs=24.4
Q ss_pred CceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 182 DLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 182 ~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
.++|||+.+.||+ ..+|.+.|+||+.+.
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~ 201 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSG 201 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred eeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence 4799999999999 567778999999875
|
| >2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A | Back alignment and structure |
|---|
Probab=95.62 E-value=0.093 Score=62.05 Aligned_cols=186 Identities=10% Similarity=0.047 Sum_probs=101.0
Q ss_pred hhhhcchhhhhhhcc--ccCCHHHHHHHHHHHHHHHccCChHHHh-HhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCC
Q psy3914 390 EDYQAKIVPCVVKLF--GSNDRATRSRLLLQLEHFIGHVPDAIVN-EQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLN 466 (852)
Q Consensus 390 ~ef~~~i~P~i~~LF--~~~dr~iR~~LL~~L~~~~~~l~~~~v~-~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~ 466 (852)
.++...++|.|.+++ ...++-||-..+-.+..+.. +.++.+. +.+++.+...+.|.++.|+..++..+..+++.=.
T Consensus 141 ~e~~~~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~-~~p~~~~~~~~~~~l~~lL~d~d~~V~~~a~~~l~~i~~~~~ 219 (621)
T 2vgl_A 141 REMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYR-TSPDLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNP 219 (621)
T ss_dssp HHHHHHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHH-HCGGGCCCCSCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH-hChhhcCchhHHHHHHHHhCCCCccHHHHHHHHHHHHHHhCh
Confidence 456667777777777 66777777554444444444 3334443 2667777777777777777777776666553210
Q ss_pred c--cchhhhHHHHHHHHhcc-CC-----------Ccceeeehhhhhcccccc----------------------------
Q psy3914 467 Y--NNLNVETLRHFARLQAK-DD-----------QGGIRTNTTVCVGKIAHH---------------------------- 504 (852)
Q Consensus 467 ~--~~l~~~lL~~l~kl~~~-D~-----------~~~IR~nt~iclgkia~~---------------------------- 504 (852)
. ..+-..+++.|.++... +. .+-.++.++-+|+.+++.
T Consensus 220 ~~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~~~~w~qi~il~ll~~~~~~~d~~~~~~l~~~L~~il~~~~~~~ks~~ 299 (621)
T 2vgl_A 220 EEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKK 299 (621)
T ss_dssp HHHTTHHHHHHHHHHHHHHCCSSSCSTTEETTEESHHHHHHHHHHGGGSSSCSSHHHHHHHHHHHHHHHHHHHSCCSCSS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCccchhhcCCCCchHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCccccc
Confidence 0 00111112222222110 00 111222222222222211
Q ss_pred --------------------cCh-hhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhccc-
Q psy3914 505 --------------------LHP-QIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLST- 562 (852)
Q Consensus 505 --------------------L~~-~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~- 562 (852)
+++ ....+..+..+.+.+..+....|..|+.++..+........+.....+.+..++-
T Consensus 300 l~~~n~~~aVl~ea~~~i~~l~~~~~~~~~~~~~L~~~L~~~~~niry~aL~~l~~l~~~~~~~~~~~~~~~~i~~~L~~ 379 (621)
T 2vgl_A 300 VQHSNAKNAVLFEAISLIIHHDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKT 379 (621)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHTTCTTTHHHHHTTHHHHHHHHTT
T ss_pred ccccchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHhcc
Confidence 000 0111123344556667777888999999888877665423455667788888887
Q ss_pred CCChhhHHHHHHHH
Q psy3914 563 DPEKSVRDSAFKTI 576 (852)
Q Consensus 563 D~~~~Vr~~a~~~i 576 (852)
|++..||..++.++
T Consensus 380 d~d~~Ir~~aL~lL 393 (621)
T 2vgl_A 380 ERDVSVRQRAVDLL 393 (621)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHhHHHHHHHHH
Confidence 99999998877653
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=95.58 E-value=0.018 Score=61.57 Aligned_cols=135 Identities=9% Similarity=-0.072 Sum_probs=72.0
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCC--cceEeee------EEcCCCCeEEEEEeecc-
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPS--ILTFLDS------VESPSKSLVYLAVEYVE- 142 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPn--Ilk~~d~------~e~~~~~~~yIVtE~v~- 142 (852)
.|....+|..... +| .+.+|++........+..|+..++.|+.-+ +.+++.. .+.. +..+++++++.
T Consensus 32 ~G~~n~~~~v~~~-~g-~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~--g~~~~l~~~l~G 107 (322)
T 2ppq_A 32 EGVENSNFLLHTT-KD-PLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELS--GRPAALISFLEG 107 (322)
T ss_dssp C---EEEEEEEES-SC-CEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEET--TEEEEEEECCCC
T ss_pred CCcccceEEEEeC-Cc-cEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEEC--CEEEEEEEeCCC
Confidence 4666788888763 33 688998876223345667777777664211 2333321 1222 56789999986
Q ss_pred -cH-----------HHHHHhhhhc--C--CC----CCHHHHHHH---------------HHHHHHHHHHHHh------cC
Q psy3914 143 -PI-----------FYHLDNTLKE--N--NE----KKQIYISWG---------------IFQITRALSFLIN------DA 181 (852)
Q Consensus 143 -~L-----------~~~L~~~~~~--~--~~----l~e~~i~~~---------------l~QI~~aL~fLH~------~~ 181 (852)
++ ...|.+.... . .. ......... -..+...+.+++. ..
T Consensus 108 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~ 187 (322)
T 2ppq_A 108 MWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLPA 187 (322)
T ss_dssp BCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSSCE
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccCCc
Confidence 21 1222111110 0 00 110000000 0013445555552 23
Q ss_pred CceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 182 DLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 182 ~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
+++|||+++.||+++.++.+.|+||+.+.
T Consensus 188 ~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 188 GVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp EEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred ccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 68999999999999877666899999875
|
| >1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5 | Back alignment and structure |
|---|
Probab=95.55 E-value=0.0069 Score=63.13 Aligned_cols=119 Identities=23% Similarity=0.239 Sum_probs=84.0
Q ss_pred hhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHH
Q psy3914 398 PCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRH 477 (852)
Q Consensus 398 P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~ 477 (852)
+.+..+...+|..+|.....+| +. +.+...+.|.++.||......+ . .++|
T Consensus 101 ~~L~~ll~D~d~~VR~~aA~~l-------~~--------~~L~~L~~D~d~~VR~~aA~~l-------~-----~~~l-- 151 (244)
T 1lrv_A 101 EQLSALMFDEDREVRITVADRL-------PL--------EQLEQMAADRDYLVRAYVVQRI-------P-----PGRL-- 151 (244)
T ss_dssp GGGGGTTTCSCHHHHHHHHHHS-------CT--------GGGGGGTTCSSHHHHHHHHHHS-------C-----GGGG--
T ss_pred HHHHHHHcCCCHHHHHHHHHhC-------CH--------HHHHHHHcCCCHHHHHHHHHhc-------C-----HHHH--
Confidence 4677888889999998887764 22 1345557899999998888742 1 1222
Q ss_pred HHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhh
Q psy3914 478 FARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPAL 557 (852)
Q Consensus 478 l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L 557 (852)
..+ .+|+++.||..++-.++ . +.+..+++|+...+|.+++..+ -.+.|
T Consensus 152 -~~l-~~D~d~~VR~~aa~~l~-------~--------~ll~~ll~D~d~~VR~aaa~~l---------------~~~~L 199 (244)
T 1lrv_A 152 -FRF-MRDEDRQVRKLVAKRLP-------E--------ESLGLMTQDPEPEVRRIVASRL---------------RGDDL 199 (244)
T ss_dssp -GGT-TTCSCHHHHHHHHHHSC-------G--------GGGGGSTTCSSHHHHHHHHHHC---------------CGGGG
T ss_pred -HHH-HcCCCHHHHHHHHHcCC-------H--------HHHHHHHcCCCHHHHHHHHHhC---------------CHHHH
Confidence 223 36999999988877522 1 2345678999999998888653 23778
Q ss_pred hhcccCCChhhHHHHHHHHH
Q psy3914 558 CQLSTDPEKSVRDSAFKTIK 577 (852)
Q Consensus 558 ~~l~~D~~~~Vr~~a~~~i~ 577 (852)
..++-|+++.||..+...+.
T Consensus 200 ~~Ll~D~d~~VR~~aa~~l~ 219 (244)
T 1lrv_A 200 LELLHDPDWTVRLAAVEHAS 219 (244)
T ss_dssp GGGGGCSSHHHHHHHHHHSC
T ss_pred HHHHcCCCHHHHHHHHHcCC
Confidence 88899999999988877764
|
| >1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5 | Back alignment and structure |
|---|
Probab=95.34 E-value=0.01 Score=61.90 Aligned_cols=116 Identities=19% Similarity=0.236 Sum_probs=86.6
Q ss_pred hhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHH
Q psy3914 398 PCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRH 477 (852)
Q Consensus 398 P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~ 477 (852)
+.+..|...++..+|..+..++ +. +.+.....|.++.||...+..+ . ..+|.
T Consensus 125 ~~L~~L~~D~d~~VR~~aA~~l-------~~--------~~l~~l~~D~d~~VR~~aa~~l-------~-----~~ll~- 176 (244)
T 1lrv_A 125 EQLEQMAADRDYLVRAYVVQRI-------PP--------GRLFRFMRDEDRQVRKLVAKRL-------P-----EESLG- 176 (244)
T ss_dssp GGGGGGTTCSSHHHHHHHHHHS-------CG--------GGGGGTTTCSCHHHHHHHHHHS-------C-----GGGGG-
T ss_pred HHHHHHHcCCCHHHHHHHHHhc-------CH--------HHHHHHHcCCCHHHHHHHHHcC-------C-----HHHHH-
Confidence 4567888999999998888752 32 2345678899999999998862 1 12333
Q ss_pred HHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhh
Q psy3914 478 FARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPAL 557 (852)
Q Consensus 478 l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L 557 (852)
.+ .+|+++.||.+++.-+ .. +.+..+++|+...+|.+++.++. +|.|
T Consensus 177 --~l-l~D~d~~VR~aaa~~l-------~~--------~~L~~Ll~D~d~~VR~~aa~~l~---------------~~~L 223 (244)
T 1lrv_A 177 --LM-TQDPEPEVRRIVASRL-------RG--------DDLLELLHDPDWTVRLAAVEHAS---------------LEAL 223 (244)
T ss_dssp --GS-TTCSSHHHHHHHHHHC-------CG--------GGGGGGGGCSSHHHHHHHHHHSC---------------HHHH
T ss_pred --HH-HcCCCHHHHHHHHHhC-------CH--------HHHHHHHcCCCHHHHHHHHHcCC---------------HHHH
Confidence 23 3799999999988653 11 34667799999999999998753 3777
Q ss_pred hhcccCCChhhHHHHHHH
Q psy3914 558 CQLSTDPEKSVRDSAFKT 575 (852)
Q Consensus 558 ~~l~~D~~~~Vr~~a~~~ 575 (852)
..| -|++..||..+...
T Consensus 224 ~~L-~D~~~~VR~aa~~~ 240 (244)
T 1lrv_A 224 REL-DEPDPEVRLAIAGR 240 (244)
T ss_dssp HHC-CCCCHHHHHHHHCC
T ss_pred HHc-cCCCHHHHHHHHHH
Confidence 788 99999999987654
|
| >3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus} | Back alignment and structure |
|---|
Probab=95.08 E-value=0.1 Score=53.47 Aligned_cols=182 Identities=14% Similarity=0.167 Sum_probs=136.2
Q ss_pred hhhhhhhccccCCHHHHHHHHHHHHHHHccCCh---HHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccc-hh
Q psy3914 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPD---AIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNN-LN 471 (852)
Q Consensus 396 i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~---~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~-l~ 471 (852)
.+-.+..|....|+.++...|.-++.+++.++. ..+-+.+||-++....+.+..|-..+++.+-.|.....-.. =-
T Consensus 34 ~l~~L~~LL~dkD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe~vpL~~~~y 113 (265)
T 3b2a_A 34 ALFLILELAGEDDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALSQENEKVTIKALRALGYLVKDVPMGSKTF 113 (265)
T ss_dssp HHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTCCBCHHHH
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHcCCCCCHHHH
Confidence 566778888999999999999999999998753 34667889999999999999999999999988887755332 01
Q ss_pred hhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHH
Q psy3914 472 VETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQ 551 (852)
Q Consensus 472 ~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~ 551 (852)
..+...|.-+. +...+-+|.=++-.+|++ +..+. .+-++....++++-+......||+.++..+..+=.-..+..
T Consensus 114 ~Kl~~aL~dli-k~~~~il~~eaae~Lgkl-kv~~~---~~~V~~~l~sLl~Skd~~vK~agl~~L~eia~~S~D~~i~~ 188 (265)
T 3b2a_A 114 LKAAKTLVSLL-ESPDDMMRIETIDVLSKL-QPLED---SKLVRTYINELVVSPDLYTKVAGFCLFLNMLNSSADSGHLT 188 (265)
T ss_dssp HHHHHHHHHHT-TSCCHHHHHHHHHHHHHC-CBSCC---CHHHHHHHHHHHTCSSHHHHHHHHHHHHHHGGGCSSCCCGG
T ss_pred HHHHHHHHHHh-cCCCchHHHHHHHHhCcC-Ccccc---hHHHHHHHHHHHhCCChhHHHHHHHHHHHhhcccCCHHHHH
Confidence 22444454454 466677777788888888 33332 23344455666666667888999999888777665556677
Q ss_pred hHhhhhhhcccCCChhhHHHHHHHHHHHHHH
Q psy3914 552 RILPALCQLSTDPEKSVRDSAFKTIKGFLGK 582 (852)
Q Consensus 552 ~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~ 582 (852)
.|+--+..++-.++..+++.|...+..++.+
T Consensus 189 ~I~~eI~elL~~eD~~l~e~aLd~Le~ils~ 219 (265)
T 3b2a_A 189 LILDEIPSLLQNDNEFIVELALDVLEKALSF 219 (265)
T ss_dssp GTTTTHHHHHTCSCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHcC
Confidence 7888888888888999999888888777655
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=95.03 E-value=0.074 Score=59.92 Aligned_cols=65 Identities=9% Similarity=-0.082 Sum_probs=42.2
Q ss_pred cCCceEEEEEEEcC-------CCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCC-cceEeeeEEcCCCCeEEEEEeecc
Q psy3914 72 KHTFWKFHGGKKKG-------SNEKVTIFLNDSADTYEPALSYVKKLKTLRHPS-ILTFLDSVESPSKSLVYLAVEYVE 142 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~-------~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPn-Ilk~~d~~e~~~~~~~yIVtE~v~ 142 (852)
.|....+|++.... ++..|.+|++........+.+|+..++.|...+ ..+++..+. + .+|+||+.
T Consensus 83 gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~~~g~~P~l~~~~~-~-----g~v~e~l~ 155 (429)
T 1nw1_A 83 GGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFS-G-----GRLEEYIP 155 (429)
T ss_dssp CCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEET-T-----EEEECCCC
T ss_pred CCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHHhCCCCCcEEEEeC-C-----CEEEEEeC
Confidence 45667899987653 257889999854222255568999888885333 356666543 2 27888886
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=94.57 E-value=0.13 Score=54.09 Aligned_cols=72 Identities=10% Similarity=-0.014 Sum_probs=50.0
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCC---CCcceEeeeEEcCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRH---PSILTFLDSVESPS 130 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrH---PnIlk~~d~~e~~~ 130 (852)
..-.+.+| .|..+.||+.+. .+|+.|.||+... ......+..|+..|+.|.- --+.+++.. ..
T Consensus 17 v~~v~~~g--------~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~- 84 (288)
T 3f7w_A 17 VAAVAERG--------HSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD- 84 (288)
T ss_dssp EEEEEEEE--------EETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET-
T ss_pred eEEEEecC--------CCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC-
Confidence 34456777 788899999986 4788999998765 2334567899999988852 134555543 22
Q ss_pred CCeEEEEEeecc
Q psy3914 131 KSLVYLAVEYVE 142 (852)
Q Consensus 131 ~~~~yIVtE~v~ 142 (852)
-++|||++.
T Consensus 85 ---~~lv~e~l~ 93 (288)
T 3f7w_A 85 ---RTLAMEWVD 93 (288)
T ss_dssp ---TEEEEECCC
T ss_pred ---ceEEEEeec
Confidence 367899986
|
| >3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus} | Back alignment and structure |
|---|
Probab=94.41 E-value=0.29 Score=53.62 Aligned_cols=146 Identities=11% Similarity=0.124 Sum_probs=108.0
Q ss_pred ccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhccccc
Q psy3914 424 GHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAH 503 (852)
Q Consensus 424 ~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~ 503 (852)
++++.... ..+|+.++..|...+..+|...--.+..+++. .+..+ -+...|.+-. .|+.+-||.+++-+|++|..
T Consensus 59 ~~f~~~e~-t~lf~~v~kl~~s~d~~lKrLvYLyl~~~~~~-~~e~i--Lv~Nsl~kDl-~~~N~~iR~lALRtL~~I~~ 133 (355)
T 3tjz_B 59 EHLGTTEA-TEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCI-AEDVI--IVTSSLTKDM-TGKEDSYRGPAVRALCQITD 133 (355)
T ss_dssp CCCCHHHH-HHHHHHHHGGGGCCCHHHHHHHHHHHHHHTTT-SSCGG--GGHHHHHHHH-HSSCHHHHHHHHHHHHHHCC
T ss_pred CCCchhHH-HHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCC-HHHHH--HHHHHHHhhc-CCCcHhHHHHHHHHHhcCCC
Confidence 44554433 37899999999999999998877777666655 32222 2344454544 47888999999999998864
Q ss_pred ccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHH
Q psy3914 504 HLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFL 580 (852)
Q Consensus 504 ~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l 580 (852)
- + .-+-|.+.+.+.+.|..+-+|.+|+.+....+... .++..+.+..+..++.|.+..|--.|+.++..+-
T Consensus 134 ~---~-m~~~l~~~lk~~L~d~~pyVRk~A~l~~~kL~~~~--pe~v~~~~~~l~~ll~d~n~~V~~~Al~lL~ei~ 204 (355)
T 3tjz_B 134 S---T-MLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCS--FDVVKRWVNEAQEAASSDNIMVQYHALGLLYHVR 204 (355)
T ss_dssp T---T-THHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTTC--HHHHHTTHHHHHHHTTCSSHHHHHHHHHHHHHHH
T ss_pred H---H-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhccC--HHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHH
Confidence 2 2 34567778888999999999999999877655442 4566889999999999999988877777666553
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=94.32 E-value=0.18 Score=57.24 Aligned_cols=65 Identities=12% Similarity=-0.093 Sum_probs=41.0
Q ss_pred cCCceEEEEEEEcCCCeEEEEEEEeCCC-chHHHHHHHHHHHhCCCCCc-ceEeeeEEcCCCCeEEEEEeecc
Q psy3914 72 KHTFWKFHGGKKKGSNEKVTIFLNDSAD-TYEPALSYVKKLKTLRHPSI-LTFLDSVESPSKSLVYLAVEYVE 142 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~-~~~~~~~E~~~Lk~LrHPnI-lk~~d~~e~~~~~~~yIVtE~v~ 142 (852)
.|-...+|+......+..+.+|++.... ....-.+|+.+++.|...++ .+++..+. + .+|+||+.
T Consensus 118 gG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~----~--G~v~e~I~ 184 (458)
T 2qg7_A 118 GGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT----N--GRIEEFMD 184 (458)
T ss_dssp C--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET----T--EEEEECCC
T ss_pred CCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC----C--eEEEEeeC
Confidence 4666789998875445788899886511 11112688888888864443 56666652 2 24899986
|
| >3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B | Back alignment and structure |
|---|
Probab=94.25 E-value=0.18 Score=63.29 Aligned_cols=133 Identities=11% Similarity=0.066 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCC--CcHHHHHHHHHHHHHhcccCCcc---chhhhHHHHHHHHhc---
Q psy3914 412 RSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLD--TNPTIREQTVKSIIHLAPKLNYN---NLNVETLRHFARLQA--- 483 (852)
Q Consensus 412 R~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D--~~~~iRe~tlksi~~l~~kl~~~---~l~~~lL~~l~kl~~--- 483 (852)
|.++-+-|..+. ++....+...+++.+...+.+ .++..||+++.++-.+++.+... .+-..+++.|..+..
T Consensus 430 ~~~~~~~L~~l~-~~~~~~~l~~v~~~l~~~l~~~~~~W~~~eaal~algsia~~~~~~~e~~~l~~v~~~l~~l~~~~~ 508 (1049)
T 3m1i_C 430 YKSEREVLVYLT-HLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLTVKKR 508 (1049)
T ss_dssp HHHHHHHHHHHH-HHCHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHH-ccCHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhcccCchhhHHHHHHHHHHHHHHHhhhc
Confidence 434444455444 445666777888887776653 57899999999999999887654 223445565555432
Q ss_pred -cCCCcceeeehhhhhcccccccChh-hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccC
Q psy3914 484 -KDDQGGIRTNTTVCVGKIAHHLHPQ-IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFL 545 (852)
Q Consensus 484 -~D~~~~IR~nt~iclgkia~~L~~~-~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~ 545 (852)
+|+.+.||..++-++|+++..+... ..-..+++.+...+.|+.+.+|.+|..+|..+++.+.
T Consensus 509 ~~~~~~~v~~~~~~~lgry~~~~~~~~~~l~~vl~~ll~~l~~~~~~V~~~A~~al~~l~~~~~ 572 (1049)
T 3m1i_C 509 GKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQKCK 572 (1049)
T ss_dssp SHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHT
T ss_pred cccchHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 2567778877889999999877653 2233445667778999999999999999987776544
|
| >3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A | Back alignment and structure |
|---|
Probab=94.24 E-value=0.15 Score=55.87 Aligned_cols=147 Identities=7% Similarity=0.029 Sum_probs=103.0
Q ss_pred HhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCcc----chhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChh
Q psy3914 433 EQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYN----NLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ 508 (852)
Q Consensus 433 ~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~----~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~ 508 (852)
.-++|.|+..+.+.++.+|+.++..+-.|+..-+.. .+....+|.|.++.....+..++.+++-+|..|+.+-+ +
T Consensus 126 ~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~-~ 204 (354)
T 3nmw_A 126 KGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCT-E 204 (354)
T ss_dssp HHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCH-H
T ss_pred CCcHHHHHHHHCCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccCh-h
Confidence 456999999999999999999999998887541211 12234588888864345667888899999999887432 2
Q ss_pred hHHH-----HHHHHHHhhccCCCh----HHHHHHHHHHHHHhhc--cCHH----HHHHhHhhhhhhcccCCChhhHHHHH
Q psy3914 509 IRQK-----VLISAFSRAMRDPFP----PARNAGVLALAATQQY--FLLS----EVAQRILPALCQLSTDPEKSVRDSAF 573 (852)
Q Consensus 509 ~~~~-----vLi~af~r~lkDp~~----~~R~a~l~~l~~~~~~--~~~~----~~a~~ILP~L~~l~~D~~~~Vr~~a~ 573 (852)
.+.. -.+|.+.+.|+++.. .++..++-+|..+..+ -+.+ .+..-.+|.|..++.+.+..|+..|.
T Consensus 205 nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~ 284 (354)
T 3nmw_A 205 NKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNAC 284 (354)
T ss_dssp HHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHH
T ss_pred hhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHH
Confidence 2322 247888998887643 3666666666544432 1111 22345799999999999999999998
Q ss_pred HHHHHHH
Q psy3914 574 KTIKGFL 580 (852)
Q Consensus 574 ~~i~~~l 580 (852)
.+|..+.
T Consensus 285 ~aL~nLa 291 (354)
T 3nmw_A 285 GTLWNLS 291 (354)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 8888775
|
| >3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.93 E-value=0.36 Score=54.83 Aligned_cols=184 Identities=8% Similarity=0.033 Sum_probs=119.1
Q ss_pred hhhhhhhcccc-----------CCHHHHHHHHHHHHHHHccCC--hHHH--hHhHHHHHHhhcCCCcHHHHHHHHHHHHH
Q psy3914 396 IVPCVVKLFGS-----------NDRATRSRLLLQLEHFIGHVP--DAIV--NEQIFQQVALGFLDTNPTIREQTVKSIIH 460 (852)
Q Consensus 396 i~P~i~~LF~~-----------~dr~iR~~LL~~L~~~~~~l~--~~~v--~~~I~P~l~~g~~D~~~~iRe~tlksi~~ 460 (852)
++|.|+.|+.. ..+.++.....-|..+...-+ ...+ ..-++|.|+..+...++.+|+.++.++-.
T Consensus 190 ~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~n 269 (458)
T 3nmz_A 190 GLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRN 269 (458)
T ss_dssp HHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhhhhcccccccCCCCHHHHHHHHHHHHHHhCCCcccHHHHHHcCCcHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 46888888742 123344333333333332221 2234 34569999999999999999999999988
Q ss_pred hcccCCcc----chhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHH-----HHHHHHhhccCCCh----
Q psy3914 461 LAPKLNYN----NLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV-----LISAFSRAMRDPFP---- 527 (852)
Q Consensus 461 l~~kl~~~----~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~v-----Li~af~r~lkDp~~---- 527 (852)
|+-.-+.. .+....+|.|.++.....+..++.+++-+|+.|+.+-+ +.+..+ .+|.+.++|+.+..
T Consensus 270 Ls~~~~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~-~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~ 348 (458)
T 3nmz_A 270 LSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCT-ENKADICAVDGALAFLVGTLTYRSQTNTL 348 (458)
T ss_dssp HTSSCCHHHHHHHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCH-HHHHHHHHSTTHHHHHHHHTTCCCSSSTT
T ss_pred HhcCCCHHHHHHHHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCH-HHHHHHHHhcCcHHHHHHHhcCCCCcchH
Confidence 87532222 12233578888864345677889999999999987432 223333 47888888876643
Q ss_pred HHHHHHHHHHHHHhhc--cCHH----HHHHhHhhhhhhcccCCChhhHHHHHHHHHHHH
Q psy3914 528 PARNAGVLALAATQQY--FLLS----EVAQRILPALCQLSTDPEKSVRDSAFKTIKGFL 580 (852)
Q Consensus 528 ~~R~a~l~~l~~~~~~--~~~~----~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l 580 (852)
.++..++-+|..+..+ -+.+ .+..-++|.|..++.+.+..|+..|..+|..+.
T Consensus 349 ~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa 407 (458)
T 3nmz_A 349 AIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLS 407 (458)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence 3566565555544432 1211 233567999999999999999999998888775
|
| >2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=93.89 E-value=0.12 Score=64.08 Aligned_cols=169 Identities=14% Similarity=0.055 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCC-----CcHHHHHHHHHHHHHhcccCCccc--hhhhHHHHHHHHhc
Q psy3914 411 TRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLD-----TNPTIREQTVKSIIHLAPKLNYNN--LNVETLRHFARLQA 483 (852)
Q Consensus 411 iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D-----~~~~iRe~tlksi~~l~~kl~~~~--l~~~lL~~l~kl~~ 483 (852)
-|..+.+-|..+...+. +.+...+++.+...+.. .++..||+++.++-.+++.+.... .-..+++.+..+..
T Consensus 437 ~R~~~~~~l~~~~~~~~-~~~l~~~~~~l~~~l~~~~~~~~~w~~~eaal~~l~~iae~~~~~~~~~l~~l~~~l~~l~~ 515 (971)
T 2x1g_F 437 YRQDISDTFMYCYDVLN-DYILEILAAMLDEAIADLQRHPTHWTKLEACIYSFQSVAEHFGGEEKRQIPRLMRVLAEIPY 515 (971)
T ss_dssp HHHHHHHHHHHHHTTCT-THHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHTTTC------CHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHhhcChhhhHHHHHHHHHHHhcCc
Confidence 46666666777777666 56667777777666643 678899999999999999887643 11234554444443
Q ss_pred cCCCcceeeehhhhhcccccccChhh-HHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHH--HHHHhHhhhhhhc
Q psy3914 484 KDDQGGIRTNTTVCVGKIAHHLHPQI-RQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLS--EVAQRILPALCQL 560 (852)
Q Consensus 484 ~D~~~~IR~nt~iclgkia~~L~~~~-~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~--~~a~~ILP~L~~l 560 (852)
.|..+.||..++.+||+++..+.... --..+++.+.+.+ | +.++.+|..++..+++.+... -....|+..|..+
T Consensus 516 ~d~~~~vr~~a~~~l~~~~~~l~~~~~~l~~vl~~l~~~l-~--~~v~~~A~~al~~l~~~~~~~l~p~~~~ll~~l~~~ 592 (971)
T 2x1g_F 516 EKLNVKLLGTALETMGSYCNWLMENPAYIPPAINLLVRGL-N--SSMSAQATLGLKELCRDCQLQLKPYADPLLNACHAS 592 (971)
T ss_dssp TTSCHHHHHHHHHHHHHTHHHHC----CHHHHHHHHHHHH-H--SSCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh-C--hHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 36789999999999999999887532 2233455666667 5 567888888888777654322 1223333333444
Q ss_pred ccCC--ChhhHHHHHHHHHHHHHHH
Q psy3914 561 STDP--EKSVRDSAFKTIKGFLGKL 583 (852)
Q Consensus 561 ~~D~--~~~Vr~~a~~~i~~~l~~l 583 (852)
+..+ ...++..++++|..++..+
T Consensus 593 l~~~~~~~~~~~~~~~ai~~i~~~~ 617 (971)
T 2x1g_F 593 LNTGRMKNSDSVRLMFSIGKLMSLL 617 (971)
T ss_dssp HHSTTSCHHHHHHHHHHHHHHHHTS
T ss_pred HcCCCCChHHHHHHHHHHHHHHHhC
Confidence 4442 3456666777776666543
|
| >1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 | Back alignment and structure |
|---|
Probab=93.85 E-value=0.24 Score=55.99 Aligned_cols=125 Identities=8% Similarity=0.010 Sum_probs=94.0
Q ss_pred HHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc---cchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHH
Q psy3914 436 FQQVALGFLDTNPTIREQTVKSIIHLAPKLNY---NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQK 512 (852)
Q Consensus 436 ~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~---~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~ 512 (852)
+|.++..+...++.+|+.++..+-.++..-+. ..+....+|.|.++. ..+...++..++-+|..|+.. +++.+..
T Consensus 4 l~~lv~~L~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL-~s~~~~~~~~A~~aL~nLa~~-~~~~k~~ 81 (457)
T 1xm9_A 4 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLL-RSPNQNVQQAAAGALRNLVFR-STTNKLE 81 (457)
T ss_dssp HHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHT-TSSCHHHHHHHHHHHHHHHSS-CHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHH-cCCCHHHHHHHHHHHHHHhcC-CHHHHHH
Confidence 57788888888999999999999998743221 223344588888887 467788999999999999984 4566655
Q ss_pred HH----HHHHHhhcc-CCChHHHHHHHHHHHHHhhccC-HHHHHHhHhhhhhhccc
Q psy3914 513 VL----ISAFSRAMR-DPFPPARNAGVLALAATQQYFL-LSEVAQRILPALCQLST 562 (852)
Q Consensus 513 vL----i~af~r~lk-Dp~~~~R~a~l~~l~~~~~~~~-~~~~a~~ILP~L~~l~~ 562 (852)
+. +|.|++.|+ .+...++..++.+|..+...-. ...+..-.+|.|..++.
T Consensus 82 i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i~~g~i~~Lv~ll~ 137 (457)
T 1xm9_A 82 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVI 137 (457)
T ss_dssp HHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHhHHHHHhccHHHHHHHHh
Confidence 54 899999998 7788899888888876554422 23344489999999983
|
| >2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B | Back alignment and structure |
|---|
Probab=93.75 E-value=0.11 Score=64.33 Aligned_cols=167 Identities=11% Similarity=0.076 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHccCChHHHhHhHHHHHHhhc----CCCcHHHHHHHHHHHHHhcccCCccc--hhhhHHHHHHHHhccC
Q psy3914 412 RSRLLLQLEHFIGHVPDAIVNEQIFQQVALGF----LDTNPTIREQTVKSIIHLAPKLNYNN--LNVETLRHFARLQAKD 485 (852)
Q Consensus 412 R~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~----~D~~~~iRe~tlksi~~l~~kl~~~~--l~~~lL~~l~kl~~~D 485 (852)
|..+.+-|..+...+. +.+...+++.+...+ .+.++..||+++.++-.+++.+.... +-..+++.+..+. +
T Consensus 424 r~~~~~~L~~~~~~~~-~~~l~~~~~~l~~~l~~~~~~~~w~~~eaal~al~~i~~~~~~~~~~~l~~l~~~l~~l~--~ 500 (963)
T 2x19_B 424 RVDISDTLMYVYEMLG-AELLSNLYDKLGRLLTSSEEPYSWQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRIS--I 500 (963)
T ss_dssp HHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHHHHHHTTSCCSSCCSHHHHHHHHGGGSC--C
T ss_pred HHHHHHHHHHHHHHcc-HHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHHHhCC--C
Confidence 4444445555444444 445667777776666 67789999999999999999887532 2233455444443 4
Q ss_pred CCcceeeehhhhhcccccccChh-hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHH--HHHHhHhhhhhhccc
Q psy3914 486 DQGGIRTNTTVCVGKIAHHLHPQ-IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLS--EVAQRILPALCQLST 562 (852)
Q Consensus 486 ~~~~IR~nt~iclgkia~~L~~~-~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~--~~a~~ILP~L~~l~~ 562 (852)
+.+.||..++.++|+++..+... ..-..+++.+...+.| +.+|.+|..+|..+++.+... -....|+..|..++.
T Consensus 501 ~~~~vr~~~~~~l~~~~~~l~~~~~~l~~vl~~l~~~l~~--~~V~~~A~~al~~l~~~~~~~l~p~~~~il~~l~~~l~ 578 (963)
T 2x19_B 501 SNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHALGN--PELSVSSVSTLKKICRECKYDLPPYAANIVAVSQDVLM 578 (963)
T ss_dssp CSHHHHHHHHHHHHHTHHHHHHCHHHHTTTHHHHHHHTTC--GGGHHHHHHHHHHHHHHTGGGCTTTHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--chHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhc
Confidence 57889999999999999987643 2333456677777887 578888888887666533211 112333333333333
Q ss_pred C--CChhhHHHHHHHHHHHHHHH
Q psy3914 563 D--PEKSVRDSAFKTIKGFLGKL 583 (852)
Q Consensus 563 D--~~~~Vr~~a~~~i~~~l~~l 583 (852)
. -...+|..++++|..++..+
T Consensus 579 ~~~~~~~~~~~~~eai~~i~~~~ 601 (963)
T 2x19_B 579 KQIHKTSQCMWLMQALGFLLSAL 601 (963)
T ss_dssp TTCSCHHHHHHHHHHHHHHHTTS
T ss_pred cCCCChHHHHHHHHHHHHHHhcC
Confidence 2 23456667777777776544
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=93.74 E-value=0.32 Score=51.88 Aligned_cols=67 Identities=6% Similarity=-0.049 Sum_probs=41.6
Q ss_pred CCceEEEEEEEcCCCeEEEEEEEeCC-CchHHHHHHHHHHHhCCCCC--cceEeee-----EEcCCCCeEEEEEeecc
Q psy3914 73 HTFWKFHGGKKKGSNEKVTIFLNDSA-DTYEPALSYVKKLKTLRHPS--ILTFLDS-----VESPSKSLVYLAVEYVE 142 (852)
Q Consensus 73 Gs~~~Vy~a~~k~~g~~VaVKv~~~~-~~~~~~~~E~~~Lk~LrHPn--Ilk~~d~-----~e~~~~~~~yIVtE~v~ 142 (852)
|....+|.... .+|+.+.+|++... .....+..|+..++.|..-+ +.+++.. .... +..++++|++.
T Consensus 36 g~~n~~y~v~~-~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~--g~~~~l~~~i~ 110 (328)
T 1zyl_A 36 SYENRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQ--GFYFAVFPSVG 110 (328)
T ss_dssp CSSSEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEET--TEEEEEEECCC
T ss_pred CcccceEEEEc-CCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEEC--CEEEEEEEecC
Confidence 34456787654 34667999998742 34566777888887774212 3444432 1223 56788999987
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=93.73 E-value=0.18 Score=55.83 Aligned_cols=132 Identities=12% Similarity=0.039 Sum_probs=75.1
Q ss_pred CCceEEEEEEEcC-------CCeEEEEEEEeC-CCchHHHHHHHHHHHhCC-CCCcceEeeeEEcCCCCeEEEEEeecc-
Q psy3914 73 HTFWKFHGGKKKG-------SNEKVTIFLNDS-ADTYEPALSYVKKLKTLR-HPSILTFLDSVESPSKSLVYLAVEYVE- 142 (852)
Q Consensus 73 Gs~~~Vy~a~~k~-------~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~~~~~~yIVtE~v~- 142 (852)
|-...+|+..... ++..|.+++... ........+|+++++.|. +.-..+++..+.+ .+||||+.
T Consensus 61 G~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~------g~v~e~i~G 134 (379)
T 3feg_A 61 GLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE------GRLEQYIPS 134 (379)
T ss_dssp ---CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT------EEEEECCSE
T ss_pred cccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC------ccEEEEecC
Confidence 4445567776542 357888888744 224556778999988885 3333566665532 28899987
Q ss_pred -cHH--------------HHHHhhhhcC----CCCC--HHHHHHHHHHHHH-------------------HHHHHHh---
Q psy3914 143 -PIF--------------YHLDNTLKEN----NEKK--QIYISWGIFQITR-------------------ALSFLIN--- 179 (852)
Q Consensus 143 -~L~--------------~~L~~~~~~~----~~l~--e~~i~~~l~QI~~-------------------aL~fLH~--- 179 (852)
+|. ..|.+..... .... ...+..++.++-. .+.+|..
T Consensus 135 ~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~ 214 (379)
T 3feg_A 135 RPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLE 214 (379)
T ss_dssp EECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHH
T ss_pred ccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHh
Confidence 221 1111111111 1111 2344444443321 2233321
Q ss_pred ----cCCceecccCCCCEEEccC----CcEEEcccchhh
Q psy3914 180 ----DADLRHNHVNHTSIFINSC----GEWKLGGLEYME 210 (852)
Q Consensus 180 ----~~~ivH~DIkp~NIlV~~~----g~~KL~DFg~a~ 210 (852)
...++|+|+.+.||+++.+ +.+.|+||+++.
T Consensus 215 ~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 215 STPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp TSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred hcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2358999999999999886 789999999975
|
| >4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B | Back alignment and structure |
|---|
Probab=93.71 E-value=0.2 Score=62.70 Aligned_cols=164 Identities=11% Similarity=0.092 Sum_probs=109.9
Q ss_pred HHHccCChHHHhHhHHHHHHhhcCC--CcHHHHHHHHHHHHHhcccCCccch---hhhHHHHHHHHhc----cCCCccee
Q psy3914 421 HFIGHVPDAIVNEQIFQQVALGFLD--TNPTIREQTVKSIIHLAPKLNYNNL---NVETLRHFARLQA----KDDQGGIR 491 (852)
Q Consensus 421 ~~~~~l~~~~v~~~I~P~l~~g~~D--~~~~iRe~tlksi~~l~~kl~~~~l---~~~lL~~l~kl~~----~D~~~~IR 491 (852)
.++-++...++...+++.+...+.+ .++..||+++=++=.|++.+++... -..+++.|..+.. +|+...||
T Consensus 438 ~~l~~l~~~~~~~~~~~~l~~~l~~~~~~W~~~EA~~~a~gaIa~~~~~~~e~~~l~~vi~~Ll~l~~~~~~~d~k~~v~ 517 (1023)
T 4hat_C 438 VYLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLCVKKRGKDNKAVVA 517 (1023)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHSSTTCCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHH
T ss_pred HHHhccCHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhhhccccCcchHHHH
Confidence 3455566667888889988877764 5799999999999999998876533 3456777777653 26777888
Q ss_pred eehhhhhcccccccChh-hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHH----------HHHhHhhhhhhc
Q psy3914 492 TNTTVCVGKIAHHLHPQ-IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSE----------VAQRILPALCQL 560 (852)
Q Consensus 492 ~nt~iclgkia~~L~~~-~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~----------~a~~ILP~L~~l 560 (852)
.+++-+||+.+..+... ..-+-++..+...+.|+.+.+..+|..+|..+++.+...- ....|+..+...
T Consensus 518 ~t~~~~lGry~~wl~~~~~~L~~vl~~L~~~l~~~~~~v~~~A~~al~~l~~~c~~~l~~~~~~e~~p~~~~il~~l~~~ 597 (1023)
T 4hat_C 518 SDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQKT 597 (1023)
T ss_dssp HHHHHHHHTCHHHHHHCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHTHHHHSCCTTCSSCHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHHHHHHH
Confidence 88999999999988532 1233344455666889888888899999887766544322 234455545444
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHh
Q psy3914 561 STDPEKSVRDSAFKTIKGFLGKLE 584 (852)
Q Consensus 561 ~~D~~~~Vr~~a~~~i~~~l~~le 584 (852)
+.+-...-+..++++|..+++.+.
T Consensus 598 ~~~l~~~~~~~lyeai~~vi~~~~ 621 (1023)
T 4hat_C 598 TADLQPQQVHTFYKACGIIISEER 621 (1023)
T ss_dssp HTTSCHHHHHHHHHHHHHHHTTCC
T ss_pred HHhCCHHHHHHHHHHHHHHHHhCC
Confidence 433233333356666666655544
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=93.69 E-value=0.31 Score=52.34 Aligned_cols=31 Identities=6% Similarity=0.030 Sum_probs=26.7
Q ss_pred cCCceecccCCCCEEEccC----CcEEEcccchhh
Q psy3914 180 DADLRHNHVNHTSIFINSC----GEWKLGGLEYME 210 (852)
Q Consensus 180 ~~~ivH~DIkp~NIlV~~~----g~~KL~DFg~a~ 210 (852)
...++|||+++.||+++.+ +.+.|+||+.+.
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~ 216 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK 216 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence 3468999999999999874 679999999975
|
| >3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=92.37 E-value=1.1 Score=53.70 Aligned_cols=186 Identities=8% Similarity=0.116 Sum_probs=119.8
Q ss_pred cchhhhhhhccccCCHHHHHHHHHHHHHHHcc--CChHHHhHhHHHHHHhhcCCCcHH---HHHHHHHHHHHhcccCCcc
Q psy3914 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGH--VPDAIVNEQIFQQVALGFLDTNPT---IREQTVKSIIHLAPKLNYN 468 (852)
Q Consensus 394 ~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~--l~~~~v~~~I~P~l~~g~~D~~~~---iRe~tlksi~~l~~kl~~~ 468 (852)
.-++|.++.+..+.+..+|-...+-|-.+... .-...+.+-.+|.|+..+...... +|+.+..++..|+---+..
T Consensus 456 aGvIp~Lv~Ll~S~s~~~re~A~~aL~nLS~d~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~np~ 535 (778)
T 3opb_A 456 TELISFLKREMHNLSPNCKQQVVRIIYNITRSKNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFTNPG 535 (778)
T ss_dssp TTHHHHHHHHGGGSCHHHHHHHHHHHHHHHTSGGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTSCHH
T ss_pred CcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcCCHH
Confidence 34789999999999999886655555555433 223346666788888888776554 8999998888776222211
Q ss_pred chh-----hhHHHHHHHHhccCCCcc---------e----eeehhhhhcccccccC---hhhHHHHH-----HHHHHhhc
Q psy3914 469 NLN-----VETLRHFARLQAKDDQGG---------I----RTNTTVCVGKIAHHLH---PQIRQKVL-----ISAFSRAM 522 (852)
Q Consensus 469 ~l~-----~~lL~~l~kl~~~D~~~~---------I----R~nt~iclgkia~~L~---~~~~~~vL-----i~af~r~l 522 (852)
.+. .+.+|.|..+...++... + +.+++.+|++||..=+ .++|.+++ ++.+...|
T Consensus 536 ~~f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~LL 615 (778)
T 3opb_A 536 LIFKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIENLM 615 (778)
T ss_dssp HHSSSSCSTTHHHHHHHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGG
T ss_pred HHcCCCccccchHHHHHHcCCCCCcccccccccccccHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHHHHH
Confidence 111 267888888874222211 1 6689999999998643 23444433 56777888
Q ss_pred cCCChHHHHHHHHHHHHHh--------hccCHH-HHHHhHhhhhhhcccCCChhhHHHHHHHHHHH
Q psy3914 523 RDPFPPARNAGVLALAATQ--------QYFLLS-EVAQRILPALCQLSTDPEKSVRDSAFKTIKGF 579 (852)
Q Consensus 523 kDp~~~~R~a~l~~l~~~~--------~~~~~~-~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~ 579 (852)
.+....+|.+|+..+..+. ++|..+ .-+.+=|+.|..|+-..+..+|.+|.-++..+
T Consensus 616 ~s~n~~VrrAA~elI~NL~~~~e~i~~k~~~~~~~~~~~rL~lLV~Ll~s~D~~~r~AAagALAnL 681 (778)
T 3opb_A 616 LDENVPLQRSTLELISNMMSHPLTIAAKFFNLENPQSLRNFNILVKLLQLSDVESQRAVAAIFANI 681 (778)
T ss_dssp GCSSHHHHHHHHHHHHHHHTSGGGTGGGTSCCSSHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHhCCcHHHHHHHHhhcCchhhccHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 8888899999998875433 223222 22333477777777777788888766555444
|
| >3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=92.31 E-value=0.45 Score=57.08 Aligned_cols=154 Identities=11% Similarity=0.111 Sum_probs=107.6
Q ss_pred HhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCcc--chhhhHHHHHHHHhccCCCc--ceeeehhhhhcccccccC
Q psy3914 431 VNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYN--NLNVETLRHFARLQAKDDQG--GIRTNTTVCVGKIAHHLH 506 (852)
Q Consensus 431 v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~--~l~~~lL~~l~kl~~~D~~~--~IR~nt~iclgkia~~L~ 506 (852)
++..++|.|+..+...++.+|+++++.+..|+.--..+ .++...++.|..+....... .+|.+++-.|.+|+-.-+
T Consensus 454 ~eaGvIp~Lv~Ll~S~s~~~re~A~~aL~nLS~d~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~n 533 (778)
T 3opb_A 454 LRTELISFLKREMHNLSPNCKQQVVRIIYNITRSKNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFTN 533 (778)
T ss_dssp TTTTHHHHHHHHGGGSCHHHHHHHHHHHHHHHTSGGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTSC
T ss_pred HHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcCC
Confidence 45568999999999999999999999999997442211 23344577777665433322 379999999999986666
Q ss_pred hhhHH-----HHHHHHHHhhcc-CCChH-------------HHHHHHHHHHHHhhccCH------HHHHH--hHhhhhhh
Q psy3914 507 PQIRQ-----KVLISAFSRAMR-DPFPP-------------ARNAGVLALAATQQYFLL------SEVAQ--RILPALCQ 559 (852)
Q Consensus 507 ~~~~~-----~vLi~af~r~lk-Dp~~~-------------~R~a~l~~l~~~~~~~~~------~~~a~--~ILP~L~~ 559 (852)
+...- ---|+.+..+|. +|... .+..|++||.-....=+. ..+.. ..+|.|..
T Consensus 534 p~~~f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~ 613 (778)
T 3opb_A 534 PGLIFKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIEN 613 (778)
T ss_dssp HHHHSSSSCSTTHHHHHHHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHHHcCCCccccchHHHHHHcCCCCCcccccccccccccHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHHH
Confidence 54421 135677788887 35432 267788887655544321 22333 58999999
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHh
Q psy3914 560 LSTDPEKSVRDSAFKTIKGFLGKLE 584 (852)
Q Consensus 560 l~~D~~~~Vr~~a~~~i~~~l~~le 584 (852)
++.+.+..||.+|..+|..+...-+
T Consensus 614 LL~s~n~~VrrAA~elI~NL~~~~e 638 (778)
T 3opb_A 614 LMLDENVPLQRSTLELISNMMSHPL 638 (778)
T ss_dssp GGGCSSHHHHHHHHHHHHHHHTSGG
T ss_pred HHhCCCHHHHHHHHHHHHHHhCCcH
Confidence 9999999999999999999987444
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=91.94 E-value=0.62 Score=50.41 Aligned_cols=30 Identities=7% Similarity=0.031 Sum_probs=27.1
Q ss_pred CCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 181 ADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 181 ~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
..++|||+++.||+++.++.+.|+||+.+.
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~ 235 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPM 235 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence 468999999999999988889999999875
|
| >3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A | Back alignment and structure |
|---|
Probab=91.32 E-value=1.2 Score=51.92 Aligned_cols=196 Identities=10% Similarity=0.116 Sum_probs=123.8
Q ss_pred hhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCC---hHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccC
Q psy3914 389 HEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVP---DAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKL 465 (852)
Q Consensus 389 ~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~---~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl 465 (852)
...|..--+|.++.+..+.+..++......|..+..+-+ ..++..-.+|.|+..+.+.++.||++++.++-.|+-.=
T Consensus 42 ~~~~~~~~i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~ 121 (584)
T 3l6x_A 42 PPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGR 121 (584)
T ss_dssp CCCCCCCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSS
T ss_pred CCCcccccHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccC
Confidence 345667778999999999998887655555555553322 23445567899999999999999999999999988521
Q ss_pred Cc----cchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHH---HHHHHHhhc----------------
Q psy3914 466 NY----NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV---LISAFSRAM---------------- 522 (852)
Q Consensus 466 ~~----~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~v---Li~af~r~l---------------- 522 (852)
+. ..+....++.|.++........++-+++-||..|+. .++.+..+ -+|++++++
T Consensus 122 ~~~nk~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~--~~~~k~~I~~~alp~Lv~LL~~p~sg~~~~~~~~~k 199 (584)
T 3l6x_A 122 DQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSS--HDSIKMEIVDHALHALTDEVIIPHSGWEREPNEDCK 199 (584)
T ss_dssp CHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTT--SGGGHHHHHHHTHHHHHHHTHHHHHCCC--------
T ss_pred CHHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhC--CchhhHHHHhccHHHHHHHHhccccccccccccccc
Confidence 11 222333588888877544567789999999999887 34433333 356676654
Q ss_pred -cC-CChHHHHHHHHHHHHHhhccC--HHHHH--HhHhhhhhhccc------CCChhhHHHHHHHHHHHHHHHhhh
Q psy3914 523 -RD-PFPPARNAGVLALAATQQYFL--LSEVA--QRILPALCQLST------DPEKSVRDSAFKTIKGFLGKLEQV 586 (852)
Q Consensus 523 -kD-p~~~~R~a~l~~l~~~~~~~~--~~~~a--~~ILP~L~~l~~------D~~~~Vr~~a~~~i~~~l~~le~~ 586 (852)
++ +...++..|.-+|..+..... ...+. .-+++.|..++- +++..+...+.-++..+...++.+
T Consensus 200 ~~~~~d~~V~~nAa~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~~~~~~~~~~~~~enav~aL~NLs~~~~~e 275 (584)
T 3l6x_A 200 PRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQVHRE 275 (584)
T ss_dssp --CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHTTHHHH
T ss_pred ccccccHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCcHHHHHHHHHHhhcccCccHHHHHHHHHHHHHhhcccccc
Confidence 12 234666666666655443321 12222 234555555543 344455567777777776666544
|
| >2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B | Back alignment and structure |
|---|
Probab=91.13 E-value=1.2 Score=54.79 Aligned_cols=205 Identities=10% Similarity=0.114 Sum_probs=117.0
Q ss_pred hhhhhcccCCh--hhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCCh-HHHhHhHHHHHHhhcCCCcHHHHHHHH
Q psy3914 379 PLFKIGQMLEH--EDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPD-AIVNEQIFQQVALGFLDTNPTIREQTV 455 (852)
Q Consensus 379 ~llki~~~l~~--~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~-~~v~~~I~P~l~~g~~D~~~~iRe~tl 455 (852)
.+-.|+..+.. ..+...|++.+..+.. ..+.+|...+.-+..|...+.. ......+++.++.++.+ +.||..+.
T Consensus 472 al~~i~~~~~~~~~~~l~~l~~~l~~l~~-~~~~vr~~~~~~l~~~~~~l~~~~~~l~~vl~~l~~~l~~--~~V~~~A~ 548 (963)
T 2x19_B 472 GFQSIAETIDVNYSDVVPGLIGLIPRISI-SNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHALGN--PELSVSSV 548 (963)
T ss_dssp HHHHHTTSCCSSCCSHHHHHHHHGGGSCC-CSHHHHHHHHHHHHHTHHHHHHCHHHHTTTHHHHHHHTTC--GGGHHHHH
T ss_pred HHHHHHhhcCchhhHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--chHHHHHH
Confidence 33445555543 2344445554444433 4677887777777666665432 24667899999999976 89999999
Q ss_pred HHHHHhcccCCccc--hhhhHHHHHHHHhcc-CCCcceeeehhhhhcccccccChhhHHH---HHHHHH----HhhccCC
Q psy3914 456 KSIIHLAPKLNYNN--LNVETLRHFARLQAK-DDQGGIRTNTTVCVGKIAHHLHPQIRQK---VLISAF----SRAMRDP 525 (852)
Q Consensus 456 ksi~~l~~kl~~~~--l~~~lL~~l~kl~~~-D~~~~IR~nt~iclgkia~~L~~~~~~~---vLi~af----~r~lkDp 525 (852)
.++..++......- .-..++..+..+..+ +-+...|..+.-|+|.++..++.+.+.. .|++.+ ...+..+
T Consensus 549 ~al~~l~~~~~~~l~p~~~~il~~l~~~l~~~~~~~~~~~~~~eai~~i~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~ 628 (963)
T 2x19_B 549 STLKKICRECKYDLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEI 628 (963)
T ss_dssp HHHHHHHHHTGGGCTTTHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999886544321 113455555554433 2355778888999999998876332222 222222 2222222
Q ss_pred -ChHHHH---HHHHHHHHHhhccC------------------------HHHHHHhHhhhhhhccc--CCChhhHHHHHHH
Q psy3914 526 -FPPARN---AGVLALAATQQYFL------------------------LSEVAQRILPALCQLST--DPEKSVRDSAFKT 575 (852)
Q Consensus 526 -~~~~R~---a~l~~l~~~~~~~~------------------------~~~~a~~ILP~L~~l~~--D~~~~Vr~~a~~~ 575 (852)
....|. ..+..+..+...+. ...+..+++|.+..++. -.+..|.+.++.+
T Consensus 629 ~~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~e~~~~~ 708 (963)
T 2x19_B 629 PNPSNKLAIVHILGLLSNLFTTLDISHHEDDHEGPELRKLPVPQGPNPVVVVLQQVFQLIQKVLSKWLNDAQVVEAVCAI 708 (963)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHCCSSCCC---------------CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcccccccccccccCCCCCCCCchHHHHHHHHHHHHHHHHhccCchHHHHHHHHH
Confidence 333333 23333333333322 22366777777665542 1234677778888
Q ss_pred HHHHHHHHhhh
Q psy3914 576 IKGFLGKLEQV 586 (852)
Q Consensus 576 i~~~l~~le~~ 586 (852)
++.++..++..
T Consensus 709 l~~~~~~~~~~ 719 (963)
T 2x19_B 709 FEKSVKTLLDD 719 (963)
T ss_dssp HHHHHHHSSST
T ss_pred HHHHHHhhccc
Confidence 87777665543
|
| >3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A | Back alignment and structure |
|---|
Probab=90.87 E-value=1 Score=52.67 Aligned_cols=133 Identities=10% Similarity=-0.000 Sum_probs=94.9
Q ss_pred hHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCcc---chhhhHHHHHHHHhccCCCcceeeehhhhhcccccc
Q psy3914 428 DAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYN---NLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHH 504 (852)
Q Consensus 428 ~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~---~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~ 504 (852)
+....+.-+|.|+..+...++.+|+.+...+..|+-.-++. .+....+|.|.++. ......|+.+++-+|+.|+.+
T Consensus 42 ~~~~~~~~i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL-~s~~~~vq~~Aa~AL~nLa~~ 120 (584)
T 3l6x_A 42 PPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLL-DHPKKEVHLGACGALKNISFG 120 (584)
T ss_dssp CCCCCCCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGG-GCSSHHHHHHHHHHHHHHTSS
T ss_pred CCCcccccHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHH-CCCCHHHHHHHHHHHHHHHcc
Confidence 34456667899999999999999999999988887543221 22333578888887 477899999999999999975
Q ss_pred cChhhHHHH----HHHHHHhhccC-CChHHHHHHHHHHHHHhhccC-HHHHHHhHhhhhhhcc
Q psy3914 505 LHPQIRQKV----LISAFSRAMRD-PFPPARNAGVLALAATQQYFL-LSEVAQRILPALCQLS 561 (852)
Q Consensus 505 L~~~~~~~v----Li~af~r~lkD-p~~~~R~a~l~~l~~~~~~~~-~~~~a~~ILP~L~~l~ 561 (852)
=+.+.+..+ -||++++.|+. +...++..+..+|..+...-. ...++...||.|..++
T Consensus 121 ~~~~nk~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~~~alp~Lv~LL 183 (584)
T 3l6x_A 121 RDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIVDHALHALTDEV 183 (584)
T ss_dssp SCHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHHHHTHHHHHHHT
T ss_pred CCHHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhccHHHHHHHH
Confidence 455555555 37899999985 556667776666655444322 2344456788888776
|
| >3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.60 E-value=0.76 Score=47.27 Aligned_cols=127 Identities=7% Similarity=-0.039 Sum_probs=70.7
Q ss_pred chhhhhhhccccCCH--HHHHHHHHHHHHHHccCC---hHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccc
Q psy3914 395 KIVPCVVKLFGSNDR--ATRSRLLLQLEHFIGHVP---DAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNN 469 (852)
Q Consensus 395 ~i~P~i~~LF~~~dr--~iR~~LL~~L~~~~~~l~---~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~ 469 (852)
.-+|.++.+..+.|. .++..-...+..+...-+ ...+..-.+|.|+..+...++.+|++++.++-.|+-.
T Consensus 8 ~~i~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~----- 82 (233)
T 3tt9_A 8 MTLERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFE----- 82 (233)
T ss_dssp CCHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTT-----
T ss_pred ccHHHHHHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhC-----
Confidence 346667777777766 555555555555543322 1223334566677766666667777666666655532
Q ss_pred hhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHH----HHHHHHhhcc-CCChHHHHHHHHHHHHHhhcc
Q psy3914 470 LNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKV----LISAFSRAMR-DPFPPARNAGVLALAATQQYF 544 (852)
Q Consensus 470 l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~v----Li~af~r~lk-Dp~~~~R~a~l~~l~~~~~~~ 544 (852)
+++.+..+ -||+++++|+ .+...++..++.+|..+...-
T Consensus 83 ------------------------------------~~~nk~~I~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~~ 126 (233)
T 3tt9_A 83 ------------------------------------DNDNKLEVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSND 126 (233)
T ss_dssp ------------------------------------CHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSG
T ss_pred ------------------------------------CHHHHHHHHHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCh
Confidence 11111111 3677777776 356677777665554443322
Q ss_pred C-HHHHHHhHhhhhhhccc
Q psy3914 545 L-LSEVAQRILPALCQLST 562 (852)
Q Consensus 545 ~-~~~~a~~ILP~L~~l~~ 562 (852)
. ...+...-+|.|..+++
T Consensus 127 ~~k~~i~~~~i~~Lv~ll~ 145 (233)
T 3tt9_A 127 KLKNLMITEALLTLTENII 145 (233)
T ss_dssp GGHHHHHHHHHHHHCCCCC
T ss_pred hhHHHHHhccHHHHHHHHh
Confidence 2 23455556788877664
|
| >3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus} | Back alignment and structure |
|---|
Probab=89.38 E-value=1.3 Score=45.33 Aligned_cols=144 Identities=9% Similarity=0.051 Sum_probs=105.8
Q ss_pred HhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCC---ccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccCh-h
Q psy3914 433 EQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLN---YNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHP-Q 508 (852)
Q Consensus 433 ~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~---~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~-~ 508 (852)
+..+-.+...+.|.++.++..|+-.+-.+....+ ....-.++|+.+-++. ++++-+|-..++-||+-|...... .
T Consensus 32 e~~l~~L~~LL~dkD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~ll-k~~dEkval~A~r~L~~LLe~vpL~~ 110 (265)
T 3b2a_A 32 KRALFLILELAGEDDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINAL-SQENEKVTIKALRALGYLVKDVPMGS 110 (265)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTC-CSTTHHHHHHHHHHHHHHHTTCCBCH
T ss_pred hhHHHHHHHHHhccchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHH-hccchhHHHHHHHHHHHHHcCCCCCH
Confidence 3467778888899999999999877776665532 2223456788888876 688888889999999999987654 2
Q ss_pred hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHH
Q psy3914 509 IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLG 581 (852)
Q Consensus 509 ~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~ 581 (852)
....-++.|+.-.++.+....|.-+...+... .+-..+-+|+-.|..++.-++..|+..++.++-.+..
T Consensus 111 ~~y~Kl~~aL~dlik~~~~il~~eaae~Lgkl----kv~~~~~~V~~~l~sLl~Skd~~vK~agl~~L~eia~ 179 (265)
T 3b2a_A 111 KTFLKAAKTLVSLLESPDDMMRIETIDVLSKL----QPLEDSKLVRTYINELVVSPDLYTKVAGFCLFLNMLN 179 (265)
T ss_dssp HHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHC----CBSCCCHHHHHHHHHHHTCSSHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHhcCCCchHHHHHHHHhCcC----CcccchHHHHHHHHHHHhCCChhHHHHHHHHHHHhhc
Confidence 34556778899989999888888887777665 2223345566667777777888888888887666554
|
| >3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B | Back alignment and structure |
|---|
Probab=88.93 E-value=1.4 Score=55.12 Aligned_cols=192 Identities=9% Similarity=0.077 Sum_probs=109.5
Q ss_pred cchhhhhhhccccCCHHHHHHHHHHHHHHHccC-----ChH---HHhHhHHHHHHhhcC--------------------C
Q psy3914 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHV-----PDA---IVNEQIFQQVALGFL--------------------D 445 (852)
Q Consensus 394 ~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l-----~~~---~v~~~I~P~l~~g~~--------------------D 445 (852)
..+++.++......|..++...++....+.+.+ ... .+-.+|++.++.-+. +
T Consensus 343 ~~~l~~ll~~~~~~d~~v~~~~lefw~~l~~~l~~~~~~~~~~~~~l~~Lv~~ll~~m~~~ed~~~~~dd~~e~~r~~~~ 422 (1049)
T 3m1i_C 343 LNAHQYLIQLSKIEERELFKTTLDYWHNLVADLFYEPLKKHIYEEICSQLRLVIIENMVRPEEVLVVENDEGEIVREFVK 422 (1049)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHSTTCGGGGHHHHHHHHHHHHHTCCCCTTCCEEECTTSCEEECSSC
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhcCCCcceeeeeCCCCcchHhhhc
Confidence 445666666656667777665556555554411 111 233334444444321 1
Q ss_pred CcH--HHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhc-cCCCcceeeehhhhhcccccccChhhH---HHHHHHHHH
Q psy3914 446 TNP--TIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQA-KDDQGGIRTNTTVCVGKIAHHLHPQIR---QKVLISAFS 519 (852)
Q Consensus 446 ~~~--~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~-~D~~~~IR~nt~iclgkia~~L~~~~~---~~vLi~af~ 519 (852)
..+ ..|...-..+..++.... ..+-.-+++.+..... ...+|..|-.++.|+|.|+..+..... ...+++.+.
T Consensus 423 d~d~~~~~~~~~~~L~~l~~~~~-~~~l~~v~~~l~~~l~~~~~~W~~~eaal~algsia~~~~~~~e~~~l~~v~~~l~ 501 (1049)
T 3m1i_C 423 ESDTIQLYKSEREVLVYLTHLNV-IDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLL 501 (1049)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHccCH-HHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhcccCchhhHHHHHHHHHHHH
Confidence 111 234333333334443322 2223445555555442 136788899999999999998876522 233455555
Q ss_pred hhc-----cCCChHHHHHHHHHHHHHhhccCH-HHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhhh
Q psy3914 520 RAM-----RDPFPPARNAGVLALAATQQYFLL-SEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQV 586 (852)
Q Consensus 520 r~l-----kDp~~~~R~a~l~~l~~~~~~~~~-~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~~ 586 (852)
... +||.+.+|..++..+.....+|.. ......+|+.|...+.|+++.|+..|..+|..|....+++
T Consensus 502 ~l~~~~~~~~~~~~v~~~~~~~lgry~~~~~~~~~~l~~vl~~ll~~l~~~~~~V~~~A~~al~~l~~~~~~~ 574 (1049)
T 3m1i_C 502 DLTVKKRGKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQKCKYH 574 (1049)
T ss_dssp HHTTSSCSHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHhhhccccchHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 432 244444443455556555554432 3567788999888999999999999999999888876643
|
| >4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N | Back alignment and structure |
|---|
Probab=88.87 E-value=2.5 Score=51.80 Aligned_cols=121 Identities=15% Similarity=0.145 Sum_probs=72.4
Q ss_pred CCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccC
Q psy3914 445 DTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRD 524 (852)
Q Consensus 445 D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkD 524 (852)
+.++.+|-.++-++-.-.--.. |+..+..|...+..|.+..||..+++.||.|+.. +++ .....+..++++
T Consensus 553 ~~dp~vRygaa~alglAyaGTG----n~~aIq~LL~~~~~d~~d~VRraAViaLGlI~~g-~~e----~v~rlv~~L~~~ 623 (963)
T 4ady_A 553 SDESLLRYGGAFTIALAYAGTG----NNSAVKRLLHVAVSDSNDDVRRAAVIALGFVLLR-DYT----TVPRIVQLLSKS 623 (963)
T ss_dssp CSCHHHHHHHHHHHHHHTTTSC----CHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTSS-SCS----SHHHHTTTGGGC
T ss_pred CCCHHHHHHHHHHHHHHhcCCC----CHHHHHHHHHHhccCCcHHHHHHHHHHHHhhccC-CHH----HHHHHHHHHHhc
Confidence 4567777666544432222222 2333343333334566677888888888877544 222 122233345667
Q ss_pred CChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHHH
Q psy3914 525 PFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKG 578 (852)
Q Consensus 525 p~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~ 578 (852)
..+++|.++.+|+...+--=.. .+++..|.+++-|+...||+.|...+..
T Consensus 624 ~d~~VR~gAalALGli~aGn~~----~~aid~L~~L~~D~d~~Vrq~Ai~ALG~ 673 (963)
T 4ady_A 624 HNAHVRCGTAFALGIACAGKGL----QSAIDVLDPLTKDPVDFVRQAAMIALSM 673 (963)
T ss_dssp SCHHHHHHHHHHHHHHTSSSCC----HHHHHHHHHHHTCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccCCCc----HHHHHHHHHHccCCCHHHHHHHHHHHHH
Confidence 7788999998888764321111 4566788899999999999987754443
|
| >3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T* | Back alignment and structure |
|---|
Probab=87.46 E-value=2.2 Score=53.01 Aligned_cols=134 Identities=9% Similarity=0.041 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHccCChHHHhH----hHHHHHHhhcC---CCcHHHHHHHHHHHHHhcccCCccch--------hhhHH
Q psy3914 411 TRSRLLLQLEHFIGHVPDAIVNE----QIFQQVALGFL---DTNPTIREQTVKSIIHLAPKLNYNNL--------NVETL 475 (852)
Q Consensus 411 iR~~LL~~L~~~~~~l~~~~v~~----~I~P~l~~g~~---D~~~~iRe~tlksi~~l~~kl~~~~l--------~~~lL 475 (852)
.|..+- .+-..+..+.++.+.+ .|.+.+...+. ..++..+|+++-.+-.+++-+..... ...++
T Consensus 414 ~Rk~l~-~l~d~~~~l~~~~~l~~~~~~i~~~l~~~l~~~~~~~W~~~EaaL~~l~~iaE~i~~~~~~~~~~~~~lp~l~ 492 (980)
T 3ibv_A 414 MRKKLK-IFQDTINSIDSSLFSSYMYSAITSSLSTAATLSPENSWQLIEFALYETYIFGEGLRGPDAFFNEVDKSPTVLS 492 (980)
T ss_dssp HHHHHH-HHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTTTCCSGGGTBCSSSCCBCHHH
T ss_pred HHHHHH-HHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhhccccccccCcccchhHHHH
Confidence 454444 4445556667777777 77777766653 35689999999998888887654221 22456
Q ss_pred HHHHHHh----ccCCCcceeeehhhhhcccccccChhh-HHHHHHHHHHh--hccCCChHHHHHHHHHHHHHhhccC
Q psy3914 476 RHFARLQ----AKDDQGGIRTNTTVCVGKIAHHLHPQI-RQKVLISAFSR--AMRDPFPPARNAGVLALAATQQYFL 545 (852)
Q Consensus 476 ~~l~kl~----~~D~~~~IR~nt~iclgkia~~L~~~~-~~~vLi~af~r--~lkDp~~~~R~a~l~~l~~~~~~~~ 545 (852)
+.+.++. ..++.+.||..++.++|+.+..+.... --.-++++|.. .+.||...+|.+|.++|..+++...
T Consensus 493 ~ll~~ll~s~i~~~~hp~V~~~~~~~l~rys~~~~~~~~~l~~~L~~ll~~~gl~~~~~~V~~~a~~af~~f~~~~~ 569 (980)
T 3ibv_A 493 QILALVTTSQVCRHPHPLVQLLYMEILVRYASFFDYESAAIPALIEYFVGPRGIHNTNERVRPRAWYLFYRFVKSIK 569 (980)
T ss_dssp HHHHHHHHSSTTTCCCHHHHHHHHHHHHHTGGGGGTCCTTHHHHHHHHTSTTTTTCCCTTTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHhccccccCCChhHHHHHHHHHHHHHHHhh
Confidence 6666553 237899999999999999999987532 22334556766 7889999999999999887665443
|
| >3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
Probab=87.31 E-value=1.5 Score=50.22 Aligned_cols=175 Identities=13% Similarity=0.113 Sum_probs=97.6
Q ss_pred ccCChhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhccc
Q psy3914 385 QMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPK 464 (852)
Q Consensus 385 ~~l~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~k 464 (852)
..++++ -.|+-.++..-..+.-.+|-.-|--|..+.+.+.. .+.++|.++.|+.|.++-||..+...+..++
T Consensus 256 ~hLp~e---~~IL~qLV~~l~~~~WEVRHGGLLGLKYL~DLL~~---Ld~Vv~aVL~GL~D~DDDVRAVAAetLiPIA-- 327 (800)
T 3oc3_A 256 YPLIGP---NDIIEQLVGFLDSGDWQVQFSGLIALGYLKEFVED---KDGLCRKLVSLLSSPDEDIKLLSAELLCHFP-- 327 (800)
T ss_dssp TTTSCS---CCHHHHHTTGGGCSCHHHHHHHHHHHHHTGGGCCC---HHHHHHHHHHHTTCSSHHHHHHHHHHHTTSC--
T ss_pred HhCChh---HHHHHHHHhhcCCCCeeehhhhHHHHHHHHHHHHH---HHHHHHHHHhhcCCcccHHHHHHHHHhhhhc--
Confidence 566665 24444444444667788884433333333455543 6889999999999999999999998888887
Q ss_pred CCccchhhhHHHHHHHHhccCCCcceeeeh-hhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhc
Q psy3914 465 LNYNNLNVETLRHFARLQAKDDQGGIRTNT-TVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQY 543 (852)
Q Consensus 465 l~~~~l~~~lL~~l~kl~~~D~~~~IR~nt-~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~ 543 (852)
.... -+.|+..+-....+=++.+.=++. .-.|+++..+=........|+|-+-.-++-+-+.+|.|++.++..+.
T Consensus 328 -~p~~-l~~LL~iLWd~L~~LDDLSASTgSVMdLLAkL~s~p~~a~~dp~LVPRL~PFLRHtITSVR~AVL~TL~tfL-- 403 (800)
T 3oc3_A 328 -ITDS-LDLVLEKCWKNIESEELISVSKTSNLSLLTKIYRENPELSIPPERLKDIFPCFTSPVPEVRTSILNMVKNLS-- 403 (800)
T ss_dssp -CSST-HHHHHHHHHHHHHTCCSCCTTHHHHHHHHHHHHHHCTTCCCCSGGGGGTGGGGTCSSHHHHHHHHHHTTTCC--
T ss_pred -chhh-HHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHcCCcccccChHHHHHHHhhhcCCcHHHHHHHHHHHHHHH--
Confidence 1122 233444433322111112222221 11222222111000111255665555667777777887777765544
Q ss_pred cCHHHHHHhHhhhhh-hcccCCChhhHHHHHHHHH
Q psy3914 544 FLLSEVAQRILPALC-QLSTDPEKSVRDSAFKTIK 577 (852)
Q Consensus 544 ~~~~~~a~~ILP~L~-~l~~D~~~~Vr~~a~~~i~ 577 (852)
..++|..|- .++++++..|++.+.++-+
T Consensus 404 ------~~~~LRLIFQNILLE~neeIl~lS~~VWk 432 (800)
T 3oc3_A 404 ------EESIDFLVAEVVLIEEKDEIREMAIKLLK 432 (800)
T ss_dssp ------CHHHHHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred ------hhhHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 345555554 5667777777776666654
|
| >3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=87.21 E-value=2.6 Score=43.23 Aligned_cols=139 Identities=14% Similarity=0.059 Sum_probs=100.4
Q ss_pred cchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHh-hcCCCcHHHHHHHHHHHHHhcccCCccchhh
Q psy3914 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVAL-GFLDTNPTIREQTVKSIIHLAPKLNYNNLNV 472 (852)
Q Consensus 394 ~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~-g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~ 472 (852)
..+++....|+..+...+|+.-..-|-.+ . ....++|.+.. ...|.+..|||..-+.+-.++...+..
T Consensus 70 ~~~~~la~~L~~~~~deVR~~Av~lLg~~----~---~~~~~L~~ir~~va~D~~WrVre~lA~a~~~~~~~~~pe---- 138 (240)
T 3l9t_A 70 EYIKKLAFLAYQSDVYQVRMYAVFLFGYL----S---KDKEILIFMRDEVSKDNNWRVQEVLAKAFDEFCKKIEYK---- 138 (240)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHT----T---TSHHHHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHCTT----
T ss_pred HHHHHHHHHHHhCcchHHHHHHHHHHHhc----c---CcHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHH----
Confidence 45678888888888889997655533222 2 23668999987 677899999999988888777533332
Q ss_pred hHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhcc
Q psy3914 473 ETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYF 544 (852)
Q Consensus 473 ~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~ 544 (852)
.+++.+.... +|++.-||..++.++-.-+......+....++|.+..+..||.--+|.+.--+|.-..+..
T Consensus 139 ~~l~~~~~W~-~d~n~~VRR~Ase~~rpW~~~~~~k~dp~~ll~iL~~L~~D~s~yVrKSVan~LrD~SK~~ 209 (240)
T 3l9t_A 139 KALPIIDEWL-KSSNLHTRRAATEGLRIWTNRPYFKENPNEAIRRIADLKEDVSEYVRKSVGNALRDISKKF 209 (240)
T ss_dssp TTHHHHHHHH-HCSSHHHHHHHHHHTCSGGGSTTTTTCHHHHHHHHHTTTTCSCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHh-cCCCHHHHHHHHHhhHHHhccchhhcCHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhC
Confidence 2566676665 6999999999888874433332334556678888889999999999998888887655544
|
| >2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=86.67 E-value=2.2 Score=52.61 Aligned_cols=132 Identities=8% Similarity=0.004 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhc----cCCCcceeeehhhhhcccccccChhhHH--HHHHHHHHhhc
Q psy3914 449 TIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQA----KDDQGGIRTNTTVCVGKIAHHLHPQIRQ--KVLISAFSRAM 522 (852)
Q Consensus 449 ~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~----~D~~~~IR~nt~iclgkia~~L~~~~~~--~vLi~af~r~l 522 (852)
..|..+...+..++..+.... -..+++++..... ...+|..|-.++.|||.|+..+...... ..+++.+....
T Consensus 436 ~~R~~~~~~l~~~~~~~~~~~-l~~~~~~l~~~l~~~~~~~~~w~~~eaal~~l~~iae~~~~~~~~~l~~l~~~l~~l~ 514 (971)
T 2x1g_F 436 CYRQDISDTFMYCYDVLNDYI-LEILAAMLDEAIADLQRHPTHWTKLEACIYSFQSVAEHFGGEEKRQIPRLMRVLAEIP 514 (971)
T ss_dssp HHHHHHHHHHHHHHTTCTTHH-HHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHTTTC------CHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHhhcChhhhHHHHHHHHHHHhcC
Confidence 345555556666777766333 3445555544332 1368999999999999999998864321 12344333333
Q ss_pred -cCCChHHHHHHHHHHHHHhhccCH-HHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHh
Q psy3914 523 -RDPFPPARNAGVLALAATQQYFLL-SEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLE 584 (852)
Q Consensus 523 -kDp~~~~R~a~l~~l~~~~~~~~~-~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le 584 (852)
.|+.+.+|.+++..+..+.+.+.. ......+||.|...+ | +.|+..|..+|..+.+..+
T Consensus 515 ~~d~~~~vr~~a~~~l~~~~~~l~~~~~~l~~vl~~l~~~l-~--~~v~~~A~~al~~l~~~~~ 575 (971)
T 2x1g_F 515 YEKLNVKLLGTALETMGSYCNWLMENPAYIPPAINLLVRGL-N--SSMSAQATLGLKELCRDCQ 575 (971)
T ss_dssp TTTSCHHHHHHHHHHHHHTHHHHC----CHHHHHHHHHHHH-H--SSCHHHHHHHHHHHHHHCH
T ss_pred ccccCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh-C--hHHHHHHHHHHHHHHHHHH
Confidence 378899999999999888877653 256677888888777 5 6788888887777765443
|
| >4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N | Back alignment and structure |
|---|
Probab=85.11 E-value=1.9 Score=52.79 Aligned_cols=130 Identities=15% Similarity=0.196 Sum_probs=80.8
Q ss_pred hhhhhcc-ccCCHHHHHHHHHHHH-HHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHH
Q psy3914 398 PCVVKLF-GSNDRATRSRLLLQLE-HFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETL 475 (852)
Q Consensus 398 P~i~~LF-~~~dr~iR~~LL~~L~-~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL 475 (852)
+.++.++ .+.++.+|..-.--+. .|+.-=+ ...-+.++.. +..|.++.||..++-++-.|+..= .. .+.
T Consensus 544 ~~li~~L~~~~dp~vRygaa~alglAyaGTGn-~~aIq~LL~~---~~~d~~d~VRraAViaLGlI~~g~--~e---~v~ 614 (963)
T 4ady_A 544 DDLITKMLASDESLLRYGGAFTIALAYAGTGN-NSAVKRLLHV---AVSDSNDDVRRAAVIALGFVLLRD--YT---TVP 614 (963)
T ss_dssp HHHHHHHHHCSCHHHHHHHHHHHHHHTTTSCC-HHHHHHHHHH---HHHCSCHHHHHHHHHHHHHHTSSS--CS---SHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCC-HHHHHHHHHH---hccCCcHHHHHHHHHHHHhhccCC--HH---HHH
Confidence 3443433 4577777764332222 2333223 3333333333 346778889999988887665431 11 123
Q ss_pred HHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHh
Q psy3914 476 RHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQ 541 (852)
Q Consensus 476 ~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~ 541 (852)
+.+..+. .+.++.||..++..||.+..-=+ +...+.++.++++|+...+|.+|+.+|..+.
T Consensus 615 rlv~~L~-~~~d~~VR~gAalALGli~aGn~----~~~aid~L~~L~~D~d~~Vrq~Ai~ALG~Ig 675 (963)
T 4ady_A 615 RIVQLLS-KSHNAHVRCGTAFALGIACAGKG----LQSAIDVLDPLTKDPVDFVRQAAMIALSMIL 675 (963)
T ss_dssp HHTTTGG-GCSCHHHHHHHHHHHHHHTSSSC----CHHHHHHHHHHHTCSSHHHHHHHHHHHHHHS
T ss_pred HHHHHHH-hcCCHHHHHHHHHHHHHhccCCC----cHHHHHHHHHHccCCCHHHHHHHHHHHHHHh
Confidence 3333333 57889999999999998764322 2445557788899999999999999987654
|
| >3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A | Back alignment and structure |
|---|
Probab=84.55 E-value=58 Score=36.70 Aligned_cols=218 Identities=14% Similarity=0.169 Sum_probs=120.0
Q ss_pred CHHHHhHHHHhhhhhhccCCcccccccchhhhHhhhhcCCCc--ccchhhhhhhcccCChhhhhcchhhhhhhccccCCH
Q psy3914 332 DKIDKNKFFNGLASAIDKFPKLISCHKVLPQLINAFEYGEAG--ASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDR 409 (852)
Q Consensus 332 ~~~eK~~Ff~~L~~~l~~fP~~~~~~kiLP~Ll~~~e~~~~~--~~vL~~llki~~~l~~~ef~~~i~P~i~~LF~~~dr 409 (852)
+..+|.---+-++.....||+ +..+-+-.+++.+|..+.. -.++--+..||+. ++..+|.=++.+|....|.
T Consensus 41 ~~k~K~LaaQ~I~kffk~FP~--l~~~Ai~a~lDLcEDed~~IR~qaik~Lp~~ck~----~~i~kiaDvL~QlLqtdd~ 114 (507)
T 3u0r_A 41 GTKEKRLAAQFIPKFFKHFPE--LADSAINAQLDLCEDEDVSIRRQAIKELPQFATG----ENLPRVADILTQLLQTDDS 114 (507)
T ss_dssp CHHHHHHHHHHHHHHGGGCGG--GHHHHHHHHHHHHTCSSHHHHHHHHHHGGGGCCT----TCHHHHHHHHHHHTTCCCH
T ss_pred CHHHHHHHHHHHHHHHhhChh--hHHHHHHHHHHHHhcccHHHHHHHHHhhHHHhhh----hhhhhHHHHHHHHHhccch
Confidence 344444333444555556664 2334455566666665432 2334445555554 7899999999999998887
Q ss_pred HHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHH----HHHHhccC
Q psy3914 410 ATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRH----FARLQAKD 485 (852)
Q Consensus 410 ~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~----l~kl~~~D 485 (852)
.-+..+-..|-.++ ++++..+..-+|-++..| +..+||.+++.+..-+-.|....+..++=.+ +.++. .|
T Consensus 115 ~E~~~V~~sL~sll-k~Dpk~tl~~lf~~i~~~----~e~~Rer~lkFi~~kl~~l~~~~l~~E~E~~i~~~ikK~L-~D 188 (507)
T 3u0r_A 115 AEFNLVNNALLSIF-KMDAKGTLGGLFSQILQG----EDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESKKVL-ED 188 (507)
T ss_dssp HHHHHHHHHHHHHH-HHCHHHHHHHHHHHHHHS----CHHHHHHHHHHHHHHGGGSCTTTSCHHHHHHHHHHHHHHT-TS
T ss_pred HHHHHHHHHHHHHH-hcChHHHHHHHHHHHccc----chHHHHHHHHHHHHHHhhcchhhccHHHHHHHHHHHHHHh-cc
Confidence 65544444433333 356777788889999886 5799999999997666666666666554333 33443 34
Q ss_pred CCcceeeehhhhhcccccccChhhHHHHHHHHHHhh--ccCCChHHHHHHHH----HHHHHhhccC--------HHHHHH
Q psy3914 486 DQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRA--MRDPFPPARNAGVL----ALAATQQYFL--------LSEVAQ 551 (852)
Q Consensus 486 ~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~--lkDp~~~~R~a~l~----~l~~~~~~~~--------~~~~a~ 551 (852)
... ...-.++-|-+-....+.-.....|+..+... |-.||.+.=...+. .+....-+|+ .+-++.
T Consensus 189 VT~-~EF~L~m~lL~~lkl~~t~~g~qeLv~ii~eQa~L~~~f~~sD~e~vdRlI~C~~~ALP~FS~~v~StkFv~y~~~ 267 (507)
T 3u0r_A 189 VTG-EEFVLFMKILSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRLLQCTRQAVPLFSKNVHSTRFVTYFCE 267 (507)
T ss_dssp CCH-HHHHHHHHHHHTSGGGSSHHHHHHHHHHHHHHHTTTSCCCSSCHHHHHHHHHHHHHHGGGCBTTBCCHHHHHHHHH
T ss_pred ccH-HHHHHHHHHHHhcccccCchHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHH
Confidence 322 11111111111111222223344666666543 44444422112221 2222244554 346899
Q ss_pred hHhhhhhhccc
Q psy3914 552 RILPALCQLST 562 (852)
Q Consensus 552 ~ILP~L~~l~~ 562 (852)
+|||.+..+.-
T Consensus 268 kIlP~l~~L~e 278 (507)
T 3u0r_A 268 QVLPNLGTLTT 278 (507)
T ss_dssp HTGGGTTCCCC
T ss_pred hhccchhhccc
Confidence 99998886655
|
| >1vsy_5 Proteasome activator BLM10; 20S proteasome BLM10, hydrolase, nucleus, phosphoprotein, PR proteasome, threonine protease; 3.00A {Saccharomyces cerevisiae} PDB: 3l5q_6 | Back alignment and structure |
|---|
Probab=84.52 E-value=0.59 Score=58.10 Aligned_cols=177 Identities=18% Similarity=0.142 Sum_probs=103.1
Q ss_pred hhhhhhhccccCCH-HH-HH---HHHHHHHHHHccCChHHHhHhHHHHHHhhcC-CCcHHHHHHHHHHHHHh----cccC
Q psy3914 396 IVPCVVKLFGSNDR-AT-RS---RLLLQLEHFIGHVPDAIVNEQIFQQVALGFL-DTNPTIREQTVKSIIHL----APKL 465 (852)
Q Consensus 396 i~P~i~~LF~~~dr-~i-R~---~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~-D~~~~iRe~tlksi~~l----~~kl 465 (852)
++|.+..+....|. .+ +. .++.. +....-.....+.++-.+..... +.+. .|...+..+-.+ .-.|
T Consensus 761 llP~ll~l~~~~d~~eL~~~~a~~~l~~---ls~~~~~~~~~~~~l~~l~~~~~~s~sW-~R~~~L~~lq~~~f~n~f~l 836 (997)
T 1vsy_5 761 VLPFLIGLVKHKDVCALASLDPVRLYAG---LGYMPIRKNHVAAIVDYVCSSNVALSSN-QTKLQLAFIQHFLSAELLQL 836 (997)
T ss_dssp TTTTTCTTSSCSHHHHHTTCCSHHHHHH---TSSSCCCHHHHHHHHHHSSCTTTTSCSS-SHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHhhcCcHHHHHhhHHHHHHHH---HhcCCCCHHHHHHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHc
Confidence 66766666555544 21 11 12222 22222222233444455544444 4566 777777664322 2233
Q ss_pred CccchhhhHHHHHHHHhccCCC-cceeeehhhhhccccccc-ChhhHHHHHHHHHHhhc-c--CC---------ChHHHH
Q psy3914 466 NYNNLNVETLRHFARLQAKDDQ-GGIRTNTTVCVGKIAHHL-HPQIRQKVLISAFSRAM-R--DP---------FPPARN 531 (852)
Q Consensus 466 ~~~~l~~~lL~~l~kl~~~D~~-~~IR~nt~iclgkia~~L-~~~~~~~vLi~af~r~l-k--Dp---------~~~~R~ 531 (852)
+... +..++..+..+. .|++ ..||..++.||+-|..-. ....+. .|+..|...+ + .. ....|-
T Consensus 837 ~~~~-~~~i~~~v~~~L-~D~q~~EVRe~Aa~tLsgll~c~~~~~~~~-~li~~f~~~~~~~~~~~~~~~~~~~~~~~rH 913 (997)
T 1vsy_5 837 TEEE-KNKILEFVVSNL-YNEQFVEVRVRAASILSDIVHNWKEEQPLL-SLIERFAKGLDVNKYTSKERQKLSKTDIKIH 913 (997)
T ss_dssp CTTH-HHHTHHHHTTTT-TCSSCHHHHHHHHHHHHHHHHSCCSHHHHH-HHHHHHTTSSTTTSSCHHHHHHHHHHCHHHH
T ss_pred CHHH-HHHHHHHHHHHh-cCCccHHHHHHHHHHHHHHHHcCCchhhHH-HHHHHHHHHHhhcccccccccccchHHHHHH
Confidence 4333 345666666654 5888 888888888888876444 213223 3444454332 2 11 114789
Q ss_pred HHHHHHHHHhhccCH----HHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHH
Q psy3914 532 AGVLALAATQQYFLL----SEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFL 580 (852)
Q Consensus 532 a~l~~l~~~~~~~~~----~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l 580 (852)
+|++||.|+..-|+- -.-.=.+|-.|+..+.||.. |+..+-+++..|-
T Consensus 914 ~aVLgL~AlV~a~Py~vP~P~w~P~~l~~La~~~~~~~~-i~~tvk~tlseFk 965 (997)
T 1vsy_5 914 GNVLGLGAIISAFPYVFPLPPWIPKNLSNLSSWARTSGM-TGNAAKNTISEFK 965 (997)
T ss_dssp HHHHHHHHHHTTCSCCSSCCTHHHHHHHHHHTTSSSCSS-HHHHTHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCCCCcccHHHHHHHHHHhCCCCc-hHHHHHHHHHHHH
Confidence 999999999887652 23445688999999999765 8888888888875
|
| >3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=83.55 E-value=5.1 Score=41.64 Aligned_cols=184 Identities=14% Similarity=0.130 Sum_probs=110.6
Q ss_pred cchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhh
Q psy3914 394 AKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVE 473 (852)
Q Consensus 394 ~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~ 473 (852)
.+|+-.+-..=...| ..++..|.+...++-+-++. +.+++||.++.-..|.+..||...+..+-..+.+ +..+-..
T Consensus 15 ~~v~~lln~A~~~~~-~~kl~~L~qa~el~~~~dp~-ll~~~l~~il~~~~~~~~~vrk~~~~Fi~e~~~~--k~~l~~~ 90 (257)
T 3gs3_A 15 AKVVDWCNELVIASP-STKCELLAKVQETVLGSCAE-LAEEFLESVLSLAHDSNMEVRKQVVAFVEQVCKV--KVELLPH 90 (257)
T ss_dssp HHHHHHHHHHTTCCH-HHHHHHHHHHHHHHTTTTGG-GHHHHHHHHHGGGGCSCHHHHHHHHHHHHHHHHH--CGGGHHH
T ss_pred HHHHHHHHHhhhcCc-HHHHHHHHHHHHHHHccCHh-HHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHH--HHHHHHH
Confidence 345544444433355 57888888888876666655 6678888888866777888888888777666522 3445566
Q ss_pred HHHHHHHHhccCCCcceeeehhhhhccccccc----------C-----hhhHHHHHHHHHHhhccCCChHHHHHHHHHHH
Q psy3914 474 TLRHFARLQAKDDQGGIRTNTTVCVGKIAHHL----------H-----PQIRQKVLISAFSRAMRDPFPPARNAGVLALA 538 (852)
Q Consensus 474 lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L----------~-----~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~ 538 (852)
++..+..+. +|+++.|--.++.|.+.|-+.+ + .|..-..+-....+.....-..+|+++++=++
T Consensus 91 ~l~~L~~Ll-~d~d~~V~K~~I~~~~~iY~~~l~~i~~~~~~~~~~~~~W~~m~~lK~~Il~~~~s~n~gvkl~~iKF~e 169 (257)
T 3gs3_A 91 VINVVSMLL-RDNSAQVIKRVIQACGSIYKNGLQYLCSLMEPGDSAEQAWNILSLIKAQILDMIDNENDGIRTNAIKFLE 169 (257)
T ss_dssp HHHHHHHHT-TCSCHHHHHHHHHHHHHHHHHHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHHGGGSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHH
Confidence 677777776 5777777666666666544321 1 12222222223334444455788999998777
Q ss_pred HHhhccCHH---------HHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHh
Q psy3914 539 ATQQYFLLS---------EVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLE 584 (852)
Q Consensus 539 ~~~~~~~~~---------~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le 584 (852)
.+..+++.. ++.-..+|.=.|++ .-..+...|-..+..+|+.++
T Consensus 170 ~vIl~qT~~~~~~~~~~~d~SL~~Vp~~Hp~l--~~~~Le~Ea~~lL~~LL~~~~ 222 (257)
T 3gs3_A 170 GVVVLQSFADEDSLKRDGDFSLADVPDHCTLF--RREKLQEEGNNILDILLQFHG 222 (257)
T ss_dssp HHHHHTSCCCTTSCCCTTCCCGGGSCSSCCSS--CHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhcCCCcccCCCCCCCCHHHCCCCCCcC--CHHHHHHHHHHHHHHHHHHHc
Confidence 766655422 22223344333333 112455578888888888654
|
| >4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A | Back alignment and structure |
|---|
Probab=83.41 E-value=2.4 Score=50.44 Aligned_cols=89 Identities=16% Similarity=0.210 Sum_probs=62.3
Q ss_pred hcchhhhhhhccccCCHHHHHHHHHHHHHHHccCC--hHHHhHhHH-HHHHhhcCCCcHHHHHHHHHHHHHhcccCCcc-
Q psy3914 393 QAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVP--DAIVNEQIF-QQVALGFLDTNPTIREQTVKSIIHLAPKLNYN- 468 (852)
Q Consensus 393 ~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~--~~~v~~~I~-P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~- 468 (852)
.+.|+|.|.+ +.++|...|...+.-|..++.--+ .-.+.+.++ +.|...+.|.+..||+++..++-.|+-.-++.
T Consensus 33 ~~~i~Pll~~-L~S~~~~~r~~A~~al~~l~~~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g~d~ 111 (684)
T 4gmo_A 33 EDKILPVLKD-LKSPDAKSRTTAAGAIANIVQDAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADF 111 (684)
T ss_dssp HHTTHHHHHH-HSSSCCSHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSCHHH
T ss_pred hhhHHHHHHH-cCCCCHHHHHHHHHHHHHHHcCcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcCchH
Confidence 4678887765 689999999988888888875211 112444555 45677899999999999999988776544332
Q ss_pred ---chhhhHHHHHHHHh
Q psy3914 469 ---NLNVETLRHFARLQ 482 (852)
Q Consensus 469 ---~l~~~lL~~l~kl~ 482 (852)
.++..++++|..+.
T Consensus 112 ~~~l~~~~il~~L~~~l 128 (684)
T 4gmo_A 112 CVHLYRLDVLTAIEHAA 128 (684)
T ss_dssp HHHHHHTTHHHHHHHHH
T ss_pred HHHHHHcChHHHHHHHH
Confidence 33455777766554
|
| >2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=82.59 E-value=15 Score=36.35 Aligned_cols=143 Identities=15% Similarity=0.195 Sum_probs=88.2
Q ss_pred HhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccc--------------------------------hhhhHHHH-
Q psy3914 431 VNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNN--------------------------------LNVETLRH- 477 (852)
Q Consensus 431 v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~--------------------------------l~~~lL~~- 477 (852)
....|+..++..+.|+-++||..++.-+..++.-..+-+ ++.++++.
T Consensus 29 ~d~~~l~~lI~~LDDDlwtV~kNAl~vi~~i~~~~~el~epl~~kL~vm~~ksEaIpltqeIa~a~G~la~i~Pe~v~~v 108 (253)
T 2db0_A 29 YDESVLKKLIELLDDDLWTVVKNAISIIMVIAKTREDLYEPMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKEKPELVKSM 108 (253)
T ss_dssp HCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred hhHHHHHHHHHHhccHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCchHHHHHHHHhHHHHhCHHHHHhh
Confidence 556677788888889999999888887777754433211 11111111
Q ss_pred ----HHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhH
Q psy3914 478 ----FARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRI 553 (852)
Q Consensus 478 ----l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~I 553 (852)
++.+.. -++.||.|..-.|++|+.. +|+....|.- -+..++-+|.-.-|.+++.=+.+..+.- -..++=.
T Consensus 109 Vp~lfanyri--gd~kikIn~~yaLeeIara-nP~l~~~v~r-di~smltskd~~Dkl~aLnFi~alGen~--~~yv~Pf 182 (253)
T 2db0_A 109 IPVLFANYRI--GDEKTKINVSYALEEIAKA-NPMLMASIVR-DFMSMLSSKNREDKLTALNFIEAMGENS--FKYVNPF 182 (253)
T ss_dssp HHHHHHHSCC--CSHHHHHHHHHHHHHHHHH-CHHHHHHHHH-HHHHHTSCSSHHHHHHHHHHHHTCCTTT--HHHHGGG
T ss_pred HHHHHHHHhc--CCccceecHHHHHHHHHHh-ChHHHHHHHH-HHHHHhcCCChHHHHHHHHHHHHHhccC--ccccCcc
Confidence 111211 2456777777777777754 2332222221 2233455777777777766555544322 2345678
Q ss_pred hhhhhhcccCCChhhHHHHHHHHHHH
Q psy3914 554 LPALCQLSTDPEKSVRDSAFKTIKGF 579 (852)
Q Consensus 554 LP~L~~l~~D~~~~Vr~~a~~~i~~~ 579 (852)
||-|..|+-|.+.-||..|.+++..+
T Consensus 183 LprL~aLL~D~deiVRaSaVEtL~~l 208 (253)
T 2db0_A 183 LPRIINLLHDGDEIVRASAVEALVHL 208 (253)
T ss_dssp HHHHHGGGGCSSHHHHHHHHHHHHHH
T ss_pred hHHHHHHHcCcchhhhHHHHHHHHHH
Confidence 99999999999999999888876554
|
| >4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A | Back alignment and structure |
|---|
Probab=81.46 E-value=2 Score=51.18 Aligned_cols=86 Identities=17% Similarity=0.151 Sum_probs=55.5
Q ss_pred hhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHH-----HHHHHHHhhccCCChHHHHHHHHHHHHHhhccC
Q psy3914 471 NVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQK-----VLISAFSRAMRDPFPPARNAGVLALAATQQYFL 545 (852)
Q Consensus 471 ~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~-----vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~ 545 (852)
...++|.+.+++ ..++.+|..++.+|+.|+. ++..++. .+.+.+.++|.|+...+|.+|.-+|..++...+
T Consensus 33 ~~~i~Pll~~L~--S~~~~~r~~A~~al~~l~~--~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g 108 (684)
T 4gmo_A 33 EDKILPVLKDLK--SPDAKSRTTAAGAIANIVQ--DAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEE 108 (684)
T ss_dssp HHTTHHHHHHHS--SSCCSHHHHHHHHHHHHTT--SHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSC
T ss_pred hhhHHHHHHHcC--CCCHHHHHHHHHHHHHHHc--CcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcC
Confidence 345777777775 4567788888888888875 4544433 334556777889999999998888866554443
Q ss_pred HHHHH----HhHhhhhhhc
Q psy3914 546 LSEVA----QRILPALCQL 560 (852)
Q Consensus 546 ~~~~a----~~ILP~L~~l 560 (852)
.+.+. .-|+|.|..+
T Consensus 109 ~d~~~~l~~~~il~~L~~~ 127 (684)
T 4gmo_A 109 ADFCVHLYRLDVLTAIEHA 127 (684)
T ss_dssp HHHHHHHHHTTHHHHHHHH
T ss_pred chHHHHHHHcChHHHHHHH
Confidence 33221 2255555444
|
| >3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T* | Back alignment and structure |
|---|
Probab=80.35 E-value=4.9 Score=49.93 Aligned_cols=130 Identities=8% Similarity=0.057 Sum_probs=90.4
Q ss_pred HHHHhcccCCccchhh----hHHHHHHHHhc--cCCCcceeeehhhhhcccccccChhhH--------HHHHHHHHHhhc
Q psy3914 457 SIIHLAPKLNYNNLNV----ETLRHFARLQA--KDDQGGIRTNTTVCVGKIAHHLHPQIR--------QKVLISAFSRAM 522 (852)
Q Consensus 457 si~~l~~kl~~~~l~~----~lL~~l~kl~~--~D~~~~IR~nt~iclgkia~~L~~~~~--------~~vLi~af~r~l 522 (852)
.+..++..++...+-. .+.+.+..... ....|..+=.++-||+.+++.+..... ...|++.+.+.+
T Consensus 420 ~l~d~~~~l~~~~~l~~~~~~i~~~l~~~l~~~~~~~W~~~EaaL~~l~~iaE~i~~~~~~~~~~~~~lp~l~~ll~~ll 499 (980)
T 3ibv_A 420 IFQDTINSIDSSLFSSYMYSAITSSLSTAATLSPENSWQLIEFALYETYIFGEGLRGPDAFFNEVDKSPTVLSQILALVT 499 (980)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTTTCCSGGGTBCSSSCCBCHHHHHHHHHH
T ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhhccccccccCcccchhHHHHHHHHHHH
Confidence 4444555555443333 44444444321 235688889999999999988764221 113556666665
Q ss_pred c-----CCChHHHHHHHHHHHHHhhccCHH-HHHHhHhhhhhh--cccCCChhhHHHHHHHHHHHHHHHhhh
Q psy3914 523 R-----DPFPPARNAGVLALAATQQYFLLS-EVAQRILPALCQ--LSTDPEKSVRDSAFKTIKGFLGKLEQV 586 (852)
Q Consensus 523 k-----Dp~~~~R~a~l~~l~~~~~~~~~~-~~a~~ILP~L~~--l~~D~~~~Vr~~a~~~i~~~l~~le~~ 586 (852)
. ++.+.+|.+++..+....++|... +.-..+|+.+.. .+.|+++.||.+|..++..|.+..+++
T Consensus 500 ~s~i~~~~hp~V~~~~~~~l~rys~~~~~~~~~l~~~L~~ll~~~gl~~~~~~V~~~a~~af~~f~~~~~~~ 571 (980)
T 3ibv_A 500 TSQVCRHPHPLVQLLYMEILVRYASFFDYESAAIPALIEYFVGPRGIHNTNERVRPRAWYLFYRFVKSIKKQ 571 (980)
T ss_dssp HSSTTTCCCHHHHHHHHHHHHHTGGGGGTCCTTHHHHHHHHTSTTTTTCCCTTTHHHHHHHHHHHHHHTTTT
T ss_pred hCCCCCCCCHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHhccccccCCChhHHHHHHHHHHHHHHHhhHH
Confidence 4 888999999999998888887532 455677777777 777899999999999999999888764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 852 | ||||
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 2e-16 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 2e-14 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 2e-06 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 5e-06 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 2e-13 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 3e-13 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 4e-13 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 9e-13 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 9e-13 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-12 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 3e-12 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 6e-12 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 8e-12 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-11 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-11 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 4e-11 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 7e-11 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-10 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-10 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 1e-10 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-10 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-10 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-10 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 2e-10 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 6e-10 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 8e-10 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 9e-10 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 9e-10 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 1e-09 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 1e-09 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-09 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 2e-09 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-09 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 3e-09 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 4e-09 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 7e-09 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 1e-08 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 2e-08 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 4e-08 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 4e-08 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 5e-08 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 7e-08 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 1e-07 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 5e-04 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 0.002 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 2e-07 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-07 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 4e-07 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 4e-07 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 5e-07 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 7e-07 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 8e-07 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 1e-06 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-06 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-06 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 3e-06 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 3e-06 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 4e-06 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-05 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 3e-05 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-04 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 3e-04 | |
| d1ibrb_ | 458 | a.118.1.1 (B:) Importin beta {Human (Homo sapiens) | 4e-04 |
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.0 bits (198), Expect = 2e-16
Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 1/195 (0%)
Query: 383 IGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALG 442
+ +++ ++P +V+L R ++ + G + +E++
Sbjct: 390 VNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAW 449
Query: 443 FLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIA 502
+D IRE ++ L K + + + + D R T C+ ++
Sbjct: 450 LVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAM-SGDPNYLHRMTTLFCINVLS 508
Query: 503 HHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLST 562
I K ++ R DP R +L S + + P L +L+
Sbjct: 509 EVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQ 568
Query: 563 DPEKSVRDSAFKTIK 577
D + V+ A + +
Sbjct: 569 DQDVDVKYFAQEALT 583
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.2 bits (183), Expect = 2e-14
Identities = 31/249 (12%), Positives = 82/249 (32%), Gaps = 5/249 (2%)
Query: 350 FPKLISCHKVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDR 409
+++ C K L N + ++ +G+ + ++P +
Sbjct: 322 MSQILPCIKELVSDANQHVKSALASVIMGLSPILGKD----NTIEHLLPLFLAQLKDECP 377
Query: 410 ATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNN 469
R ++ L+ + +++ + + D +R ++ + LA +L
Sbjct: 378 EVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEF 437
Query: 470 LNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPA 529
+ + D IR T + K+ + +I DP
Sbjct: 438 FDEKLNSLCMAWL-VDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLH 496
Query: 530 RNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQVSEN 589
R + + + + +LP + +++ DP +VR + K+++ L+ +
Sbjct: 497 RMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQ 556
Query: 590 PSLRESMEA 598
++ +E
Sbjct: 557 SEVKPILEK 565
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.6 bits (114), Expect = 2e-06
Identities = 27/157 (17%), Positives = 46/157 (29%), Gaps = 1/157 (0%)
Query: 383 IGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALG 442
+ L E + K+ + + A R L+ + + I +V
Sbjct: 429 LAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAM 488
Query: 443 FLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIA 502
D N R T+ I L+ + L R+ A D +R N + KI
Sbjct: 489 SGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRM-AGDPVANVRFNVAKSLQKIG 547
Query: 503 HHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAA 539
L Q + + +D + AL
Sbjct: 548 PILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEALTV 584
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (111), Expect = 5e-06
Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 1/102 (0%)
Query: 484 KDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQY 543
+++ +R N+ + IA L + + L+ + + D A L
Sbjct: 20 RNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDE-DEVLLALAEQLGTFTTL 78
Query: 544 FLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQ 585
E +LP L L+T E VRD A ++++ +
Sbjct: 79 VGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSP 120
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.6 bits (170), Expect = 2e-13
Identities = 37/252 (14%), Positives = 88/252 (34%), Gaps = 34/252 (13%)
Query: 81 GKKKGSNEKVTI--FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAV 138
+ ++V I E ++ + ++ ++P+I+ +LDS + +++ +
Sbjct: 39 AMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE--LWVVM 96
Query: 139 EYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN 196
EY+ + + T + + + + +AL FL + + H + +I +
Sbjct: 97 EYLAGGSLTDVVTETCMDEGQIAAV-----CRECLQALEFL-HSNQVIHRDIKSDNILLG 150
Query: 197 SCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILI 256
G KL + +I+ + S + PE D++ LGI+
Sbjct: 151 MDGSVKLTDFGFCAQIT----PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA 206
Query: 257 WEVFNG--PLQSTN------------RKSLSNIDNIPENLKRVYLELISERPNQRPNPAD 302
E+ G P + N L N + + + + +R + +
Sbjct: 207 IEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKE 266
Query: 303 FI----MRNRKP 310
+ ++ KP
Sbjct: 267 LLQHQFLKIAKP 278
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 69.3 bits (169), Expect = 3e-13
Identities = 42/281 (14%), Positives = 93/281 (33%), Gaps = 36/281 (12%)
Query: 81 GKKKGSNEKV---TIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLA 137
+ K + + V I + + L ++HP+I+ D ES +YL
Sbjct: 28 AEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGH--LYLI 85
Query: 138 VEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS 197
++ V L + + E + S IFQ+ A+ +L + + + ++ +
Sbjct: 86 MQLVS--GGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL 143
Query: 198 C--GEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGIL 255
+ + + S + + Y PE + D + +G++
Sbjct: 144 DEDSKIMISDFGLSKMEDPGSVLSTACGTPG-----YVAPEVLAQKPYSKAVDCWSIGVI 198
Query: 256 IWEVFNG--PLQSTNRKSL-------------SNIDNIPENLKRVYLELISERPNQRPNP 300
+ + G P N L D+I ++ K L+ + P +R
Sbjct: 199 AYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTC 258
Query: 301 ADFIMRNRKPGGYFKNDLIDALLFLEEI--QMKDKIDKNKF 339
+++ + D + + Q+K K+K+
Sbjct: 259 EQ-ALQHP----WIAGDTALDKNIHQSVSEQIKKNFAKSKW 294
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.1 bits (166), Expect = 4e-13
Identities = 39/245 (15%), Positives = 93/245 (37%), Gaps = 28/245 (11%)
Query: 81 GKKKGSNEKVTI----FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYL 136
++K + + + + + + +S V L+ L+HP+I+ + D + + + +Y+
Sbjct: 23 IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 82
Query: 137 AVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNH---- 190
+EY E + + KE + ++ + Q+T AL + + V H
Sbjct: 83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC-HRRSDGGHTVLHRDLK 141
Query: 191 -TSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDM 249
++F++ KLG ++ + Y PE +D+
Sbjct: 142 PANVFLDGKQNVKLGDFGLARILNH----DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDI 197
Query: 250 YGLGILIWEVFNG--PLQSTNRKSLSN----------IDNIPENLKRVYLELISERPNQR 297
+ LG L++E+ P + ++K L+ + L + +++ + R
Sbjct: 198 WSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHR 257
Query: 298 PNPAD 302
P+ +
Sbjct: 258 PSVEE 262
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.3 bits (164), Expect = 9e-13
Identities = 37/245 (15%), Positives = 83/245 (33%), Gaps = 33/245 (13%)
Query: 81 GKKKGSNEKVTI--FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAV 138
+ K ++ S + E + + L + HP+I+ LD+ + +++ +
Sbjct: 31 AQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENN--LWILI 88
Query: 139 EYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN 196
E+ + + + E + + Q AL++L +D + H + +I
Sbjct: 89 EFCAGGAVDAVMLELERPLTESQIQVV---CKQTLDALNYL-HDNKIIHRDLKAGNILFT 144
Query: 197 SCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTK-----CSTDMYG 251
G+ KL K + ++R + + PE + +K D++
Sbjct: 145 LDGDIKLADFGVSAKNTR----TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 200
Query: 252 LGILIWEVFNG--PLQSTN------------RKSLSNIDNIPENLKRVYLELISERPNQR 297
LGI + E+ P N +L+ N K + + + + R
Sbjct: 201 LGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDAR 260
Query: 298 PNPAD 302
+
Sbjct: 261 WTTSQ 265
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 68.2 bits (166), Expect = 9e-13
Identities = 36/243 (14%), Positives = 84/243 (34%), Gaps = 32/243 (13%)
Query: 81 GKKKGSNEKVTI--FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAV 138
++ + + E ++ + LRHP+++ D+ E ++ + +
Sbjct: 45 VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNE--MVMIY 102
Query: 139 EYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN 196
E++ +F + + + +E + + + Q+ + L + ++ + H + +I
Sbjct: 103 EFMSGGELFEKVADEHNKMSEDEAVEY---MRQVCKGLCHM-HENNYVHLDLKPENIMFT 158
Query: 197 S--CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGI 254
+ E KL + P + + + PE + TDM+ +G+
Sbjct: 159 TKRSNELKLIDFGLTAHLD-----PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 213
Query: 255 LIWEVFNG--PLQSTNRKSL-------------SNIDNIPENLKRVYLELISERPNQRPN 299
L + + +G P N S I E+ K +L+ PN R
Sbjct: 214 LSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMT 273
Query: 300 PAD 302
Sbjct: 274 IHQ 276
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.0 bits (163), Expect = 2e-12
Identities = 46/288 (15%), Positives = 105/288 (36%), Gaps = 24/288 (8%)
Query: 81 GKKKGSNEKV---TIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLA 137
K S + I L + ++ L P I+ F + S + + +
Sbjct: 25 VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE--ISIC 82
Query: 138 VEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS 197
+E+++ LD LK+ + + + + L++L + H V ++I +NS
Sbjct: 83 MEHMD--GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140
Query: 198 CGEWKLG--GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGIL 255
GE KL G+ + + + + +Y PE +D++ +G+
Sbjct: 141 RGEIKLCDFGV--------SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 256 IWEVFNG--PLQSTNRKSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGY 313
+ E+ G P+ + K L + ++ E + + M +R P
Sbjct: 193 LVEMAVGRYPIPPPDAKELELMFGC--QVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAI 250
Query: 314 FKNDLIDALLFLEEIQMKDKIDKNKFFNGLASAIDKFPKL-ISCHKVL 360
F+ L+D ++ ++ + +F + + + K P +++
Sbjct: 251 FE--LLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.4 bits (159), Expect = 3e-12
Identities = 37/228 (16%), Positives = 73/228 (32%), Gaps = 21/228 (9%)
Query: 86 SNEKVTI-FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPI 144
+ KV + L + + + L+ +K L+H ++ V +Y+ EY+E
Sbjct: 36 GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP---IYIITEYMENG 92
Query: 145 FYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204
+ + QI ++F+ + + H + +I ++ K+
Sbjct: 93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI-EERNYIHRDLRAANILVSDTLSCKIA 151
Query: 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG-- 262
I + + + PE +D++ GIL+ E+
Sbjct: 152 DFGLARLIEDNEYTAREGAKFPIK---WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
Query: 263 -PLQSTNRKSLSNI----------DNIPENLKRVYLELISERPNQRPN 299
P + DN PE L ++ ERP RP
Sbjct: 209 IPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 64.7 bits (157), Expect = 6e-12
Identities = 39/282 (13%), Positives = 98/282 (34%), Gaps = 42/282 (14%)
Query: 74 TFWKFHGGKKKGSNEKVTI-FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132
+ + + G K + V + L + E L +K ++HP+++ L
Sbjct: 29 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP- 87
Query: 133 LVYLAVEYVE---PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVN 189
Y+ E++ + Y + +E + +Y+ QI+ A+ +L + H +
Sbjct: 88 -FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM---ATQISSAMEYL-EKKNFIHRDLA 142
Query: 190 HTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDM 249
+ + K+ ++ + ++ + + PE+ + +D+
Sbjct: 143 ARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPIKWTAPESLAYNKFSIKSDV 199
Query: 250 YGLGILIWEVFNG---PLQSTNRKSLSNI----------DNIPENLKRVYLELISERPNQ 296
+ G+L+WE+ P + + + + PE + + P+
Sbjct: 200 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 259
Query: 297 RPNPADFIMRNRKPGGYFKNDLIDAL-LFLEEIQMKDKIDKN 337
RP+ A ++ A +E + D+++K
Sbjct: 260 RPSFA---------------EIHQAFETMFQESSISDEVEKE 286
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 64.6 bits (157), Expect = 8e-12
Identities = 48/256 (18%), Positives = 91/256 (35%), Gaps = 39/256 (15%)
Query: 81 GKKKGSNEKVTI-----FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVY 135
+ ++E V I S + ++ + V+ L+ LRHP+ + + +
Sbjct: 34 ARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT--AW 91
Query: 136 LAVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI 195
L +EY D +++ I+ + L++L + ++ H V +I +
Sbjct: 92 LVMEYCL--GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL-HSHNMIHRDVKAGNILL 148
Query: 196 NSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCST---DMYGL 252
+ G KLG ++ A+ Y + PE L+ D++ L
Sbjct: 149 SEPGLVKLGDFGSASIMAPANSFVGTPY--------WMAPEVILAMDEGQYDGKVDVWSL 200
Query: 253 GILIWEVFNG--PLQSTNRKS-LSNI----------DNIPENLKRVYLELISERPNQRPN 299
GI E+ PL + N S L +I + E + + + P RP
Sbjct: 201 GITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT 260
Query: 300 PAD-----FIMRNRKP 310
F++R R P
Sbjct: 261 SEVLLKHRFVLRERPP 276
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.2 bits (153), Expect = 2e-11
Identities = 32/235 (13%), Positives = 79/235 (33%), Gaps = 29/235 (12%)
Query: 86 SNEKVTI-FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE-- 142
+ +KV I + + A + E + + + L HP ++ + + L E++E
Sbjct: 28 NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHG 85
Query: 143 PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202
+ +L + + + + +++L + H + + + K
Sbjct: 86 CLSDYLRTQRGLFAAETLLGM---CLDVCEGMAYLEEACVI-HRDLAARNCLVGENQVIK 141
Query: 203 LG--GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVF 260
+ G+ + + ++ + PE +D++ G+L+WEVF
Sbjct: 142 VSDFGMTRFVLDDQYTSSTGTKFPVK-----WASPEVFSFSRYSSKSDVWSFGVLMWEVF 196
Query: 261 NGPLQSTNRKSLSNI-------------DNIPENLKRVYLELISERPNQRPNPAD 302
+ +S S + ++ ++ ERP RP +
Sbjct: 197 SEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSR 251
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 63.9 bits (155), Expect = 2e-11
Identities = 33/258 (12%), Positives = 81/258 (31%), Gaps = 37/258 (14%)
Query: 81 GKKKGSNEKVTI--FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAV 138
+K + + + + L HP ++ D+ E + + L +
Sbjct: 48 CVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYE--MVLIL 105
Query: 139 EYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN 196
E++ +F + + +E + I + Q L + ++ + H + +I
Sbjct: 106 EFLSGGELFDRIAAEDYKMSEAEVINY---MRQACEGLKHM-HEHSIVHLDIKPENIMCE 161
Query: 197 S--CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGI 254
+ K+ K++ + + + + PE TDM+ +G+
Sbjct: 162 TKKASSVKIIDFGLATKLNPDEIVKVTTATAE-----FAAPEIVDREPVGFYTDMWAIGV 216
Query: 255 LIWEVFNG--PLQSTNRKSL-------------SNIDNIPENLKRVYLELISERPNQRPN 299
L + + +G P + ++ K L+ + P +R
Sbjct: 217 LGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLT 276
Query: 300 PADFIMRNRKPGGYFKND 317
D + + + K D
Sbjct: 277 VHD-ALEHP----WLKGD 289
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.3 bits (151), Expect = 4e-11
Identities = 43/216 (19%), Positives = 87/216 (40%), Gaps = 29/216 (13%)
Query: 108 VKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISW 165
V L+ RH +IL F+ +P ++V ++ E +++HL + K I I
Sbjct: 55 VGVLRKTRHVNILLFMGYSTAPQLAIVT---QWCEGSSLYHHLHIIETKFEMIKLIDI-- 109
Query: 166 GIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG--GLEYMEKISEASCIPMKRY 223
Q + + +L + + H + +IF++ K+G GL ++ S +
Sbjct: 110 -ARQTAQGMDYL-HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 167
Query: 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG--PLQS-TNRKSLSNI----- 275
+ I + + S D+Y GI+++E+ G P + NR + +
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQS-DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGY 226
Query: 276 ---------DNIPENLKRVYLELISERPNQRPNPAD 302
N P+ +KR+ E + ++ ++RP
Sbjct: 227 LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQ 262
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.1 bits (148), Expect = 7e-11
Identities = 47/242 (19%), Positives = 89/242 (36%), Gaps = 35/242 (14%)
Query: 81 GKKKGSNEKVTI-----FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVY 135
++K S + + + A V+ LRHP+IL ++ VY
Sbjct: 25 AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VY 82
Query: 136 LAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSI 193
L +EY ++ L K + ++ YI+ ++ ALS+ + + H + ++
Sbjct: 83 LILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC-HSKRVIHRDIKPENL 137
Query: 194 FINSCGEWKLG--GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYG 251
+ S GE K+ G + P R + Y PE + D++
Sbjct: 138 LLGSAGELKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 189
Query: 252 LGILIWEVFNG--PLQSTNRKSLSNI---------DNIPENLKRVYLELISERPNQRPNP 300
LG+L +E G P ++ + D + E + + L+ P+QRP
Sbjct: 190 LGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 249
Query: 301 AD 302
+
Sbjct: 250 RE 251
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.6 bits (149), Expect = 1e-10
Identities = 39/242 (16%), Positives = 82/242 (33%), Gaps = 31/242 (12%)
Query: 81 GKKKGSNEKVTI-FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVE 139
+ S + F+ + L RH +IL +S ES + + + E
Sbjct: 24 CVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEE--LVMIFE 81
Query: 140 YVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS 197
++ IF ++ + E NE++ + + Q+ AL FL + ++ H + +I +
Sbjct: 82 FISGLDIFERINTSAFELNEREIVSY---VHQVCEALQFL-HSHNIGHFDIRPENIIYQT 137
Query: 198 CGEW--KLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGIL 255
K+ ++ + + Y PE V +TDM+ LG L
Sbjct: 138 RRSSTIKIIEFGQARQLKPGDNFRLLFTAPE-----YYAPEVHQHDVVSTATDMWSLGTL 192
Query: 256 IWEVFNG--PLQSTNRKSL-------------SNIDNIPENLKRVYLELISERPNQRPNP 300
++ + +G P + + + I L+ + R
Sbjct: 193 VYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTA 252
Query: 301 AD 302
++
Sbjct: 253 SE 254
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.9 bits (147), Expect = 1e-10
Identities = 37/219 (16%), Positives = 80/219 (36%), Gaps = 20/219 (9%)
Query: 105 LSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYIS 164
L+ ++ L +P I+ + E+ S LV E E L+ L++N K I
Sbjct: 56 LAEANVMQQLDNPYIVRMIGICEAESWMLVM---EMAE--LGPLNKYLQQNRHVKDKNII 110
Query: 165 WGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYS 224
+ Q++ + +L +++ H + ++ + + K+ + K A K +
Sbjct: 111 ELVHQVSMGMKYL-EESNFVHRDLAARNVLLVTQHYAKISDFG-LSKALRADENYYKAQT 168
Query: 225 RYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG---PLQSTNRKSLSNI------ 275
+ + PE + +D++ G+L+WE F+ P + ++ +
Sbjct: 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 228
Query: 276 ----DNIPENLKRVYLELISERPNQRPNPADFIMRNRKP 310
P + + + RP A +R R
Sbjct: 229 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 267
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.5 bits (146), Expect = 1e-10
Identities = 30/245 (12%), Positives = 78/245 (31%), Gaps = 26/245 (10%)
Query: 74 TFWKFHGGKKKGSNEKVTI-FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132
F GK +G V I + + + + + + K + L H ++
Sbjct: 16 QFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP- 73
Query: 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNH 190
+++ EY+ + +L ++ + + + A+ +L + H +
Sbjct: 74 -IFIITEYMANGCLLNYLREMRHRFQTQQLLEM---CKDVCEAMEYLESK-QFLHRDLAA 128
Query: 191 TSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMY 250
+ +N G K+ + + + + PE + +D++
Sbjct: 129 RNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 185
Query: 251 GLGILIWEVFNG---PLQSTNRKSLSNI----------DNIPENLKRVYLELISERPNQR 297
G+L+WE+++ P + + E + + E+ ++R
Sbjct: 186 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADER 245
Query: 298 PNPAD 302
P
Sbjct: 246 PTFKI 250
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.4 bits (146), Expect = 1e-10
Identities = 32/261 (12%), Positives = 79/261 (30%), Gaps = 30/261 (11%)
Query: 74 TFWKFHGGKKKGSNEKV---TIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130
+ + + + E V + + + D E + K L H +++ F +
Sbjct: 17 AYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN 76
Query: 131 KSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNH 190
YL +EY + ++ + + Q+ + +L + + H +
Sbjct: 77 I--QYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGVVYL-HGIGITHRDIKP 131
Query: 191 TSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS-HVTKCSTDM 249
++ ++ K+ + + ++ Y PE D+
Sbjct: 132 ENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMCGTLPYVAPELLKRREFHAEPVDV 189
Query: 250 YGLGILIWEVFNGPLQS--------------TNRKSLSNIDNIPENLKRVYLELISERPN 295
+ GI++ + G L + L+ I + +++ E P+
Sbjct: 190 WSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPS 249
Query: 296 QRPNPAD-----FIMRNRKPG 311
R D + + K G
Sbjct: 250 ARITIPDIKKDRWYNKPLKKG 270
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 60.6 bits (146), Expect = 2e-10
Identities = 34/275 (12%), Positives = 73/275 (26%), Gaps = 17/275 (6%)
Query: 81 GKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEY 140
G + E+V I L + K K ++ + + + + +E
Sbjct: 26 GTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGA-EGDYNVMVMEL 84
Query: 141 VEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE 200
+ P D + + + Q+ + ++ + + H V + + +
Sbjct: 85 LGP--SLEDLFNFCSRKFSLKTVLLLADQMISRIEYI-HSKNFIHRDVKPDNFLMGLGKK 141
Query: 201 WKL------GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGI 254
L G + IP + + Y L D+ LG
Sbjct: 142 GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGY 201
Query: 255 LIWEVFNGPLQSTNRKSLSNIDNIPENLKRVYLELISERPNQRPNPA-DFIMR------N 307
++ G L K+ + ++ I P+ ++ +
Sbjct: 202 VLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFD 261
Query: 308 RKPGGYFKNDLIDALLFLEEIQMKDKIDKNKFFNG 342
KP + L L + D N G
Sbjct: 262 DKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFG 296
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.9 bits (147), Expect = 2e-10
Identities = 30/212 (14%), Positives = 75/212 (35%), Gaps = 16/212 (7%)
Query: 108 VKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYISWGI 167
+K HP++L+ L S + + Y++ + +N + I +G+
Sbjct: 79 GIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 137
Query: 168 FQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYE 227
Q+ + + F + H + + ++ K+ + + + + +
Sbjct: 138 -QVAKGMKF-LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 195
Query: 228 DQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG---PLQSTNR----------KSLSN 274
+ E+ + +D++ G+L+WE+ P N + L
Sbjct: 196 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 255
Query: 275 IDNIPENLKRVYLELISERPNQRPNPADFIMR 306
+ P+ L V L+ + RP+ ++ + R
Sbjct: 256 PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.9 bits (147), Expect = 2e-10
Identities = 34/226 (15%), Positives = 82/226 (36%), Gaps = 28/226 (12%)
Query: 111 LKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIF 168
HP + + ++ ++ +EY+ + YH+ + K + + Y +
Sbjct: 57 SLAWEHPFLTHMFCTFQTKEN--LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAA---- 110
Query: 169 QITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYED 228
+I L FL + + + + +I ++ G K+ + + + + + + +
Sbjct: 111 EIILGLQFL-HSKGIVYRDLKLDNILLDKDGHIKIADFG----MCKENMLGDAKTNTFCG 165
Query: 229 QSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG--PLQSTNRKSLSNI---------DN 277
Y PE L S D + G+L++E+ G P + + L +
Sbjct: 166 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW 225
Query: 278 IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALL 323
+ + K + ++L P +R I ++ F+ + L
Sbjct: 226 LEKEAKDLLVKLFVREPEKRLGVRGDIRQHP----LFREINWEELE 267
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.9 bits (142), Expect = 6e-10
Identities = 36/238 (15%), Positives = 85/238 (35%), Gaps = 23/238 (9%)
Query: 81 GKKKGSNEKVTI-FLNDSADTYEPALSYVKK----LKTLRHPSILTFLDSVESPSKSLVY 135
++ ++ + I L E + YV + + L HP + + + K +Y
Sbjct: 27 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK--LY 84
Query: 136 LAVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFI 195
+ Y + L +++ + + +I AL +L + + H + +I +
Sbjct: 85 FGLSYAK--NGELLKYIRKIGSFDETCTRFYTAEIVSALEYL-HGKGIIHRDLKPENILL 141
Query: 196 NSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGIL 255
N ++ + +S S R + + + Y PE S+D++ LG +
Sbjct: 142 NEDMHIQITDFGTAKVLSPES--KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCI 199
Query: 256 IWEVFNG--PLQSTNRKS-LSNI--------DNIPENLKRVYLELISERPNQRPNPAD 302
I+++ G P ++ N I + + + +L+ +R +
Sbjct: 200 IYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEE 257
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.1 bits (140), Expect = 8e-10
Identities = 35/238 (14%), Positives = 77/238 (32%), Gaps = 30/238 (12%)
Query: 81 GKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEY 140
G +G KV + + T + L+ + LRH +++ L + L Y+ EY
Sbjct: 26 GDYRG--NKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL-YIVTEY 82
Query: 141 VE--PIFYHLDNTLKEN-NEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS 197
+ + +L + + + + A+ +L + H + ++ ++
Sbjct: 83 MAKGSLVDYLRSRGRSVLGGDCLLKF---SLDVCEAMEYL-EGNNFVHRDLAARNVLVSE 138
Query: 198 CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIW 257
K+ ++ S + + PE +D++ GIL+W
Sbjct: 139 DNVAKVSDFGLTKEASS-------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW 191
Query: 258 EVFNGPLQSTNRKSLSNI-------------DNIPENLKRVYLELISERPNQRPNPAD 302
E+++ R L ++ D P + V RP+
Sbjct: 192 EIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQ 249
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.2 bits (140), Expect = 9e-10
Identities = 34/235 (14%), Positives = 73/235 (31%), Gaps = 20/235 (8%)
Query: 81 GKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEY 140
G G+ L + E L + +K LRH ++ V +V +
Sbjct: 36 GTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK 95
Query: 141 VEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE 200
+ + T K + + + QI ++++ + H + +I +
Sbjct: 96 GSLLDFLKGETGKYLRLPQLVDM---AAQIASGMAYV-ERMNYVHRDLRAANILVGENLV 151
Query: 201 WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVF 260
K+ I + + + PE +L +D++ GIL+ E+
Sbjct: 152 CKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 208
Query: 261 NG---PLQSTNRKSLSNI----------DNIPENLKRVYLELISERPNQRPNPAD 302
P + + + PE+L + + + P +RP
Sbjct: 209 TKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 263
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.3 bits (140), Expect = 9e-10
Identities = 43/257 (16%), Positives = 79/257 (30%), Gaps = 23/257 (8%)
Query: 81 GKKKGSNEKVTI-------FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133
+ K +N+ V I AL +K L+ L HP+I+ LD+ S
Sbjct: 17 ARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN-- 74
Query: 134 VYLAVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSI 193
+ L +++E + +I + + L +L + H + ++
Sbjct: 75 ISLVFDFME--TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNL 131
Query: 194 FINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSH-VTKCSTDMYGL 252
++ G KL + P + Y+ Y+ PE + DM+ +
Sbjct: 132 LLDENGVLKLADFGLAKSFGS----PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAV 187
Query: 253 GILIWEVFNGPLQSTNRKSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGG 312
G ++ E+ L + I E L E + +
Sbjct: 188 GCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHH 247
Query: 313 YFKN------DLIDALL 323
F DLI L
Sbjct: 248 IFSAAGDDLLDLIQGLF 264
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 57.8 bits (139), Expect = 1e-09
Identities = 47/245 (19%), Positives = 93/245 (37%), Gaps = 28/245 (11%)
Query: 81 GKKKGSNEKVTI-----FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVE--SPSKSL 133
+ + V + L Y + L HP+I+ D+ E +P+ L
Sbjct: 26 ARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 85
Query: 134 VYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTS 192
Y+ +EYV+ + +T K+ I + I +AL+F + + H V +
Sbjct: 86 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV---IADACQALNFS-HQNGIIHRDVKPAN 141
Query: 193 IFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGL 252
I I++ K+ I++ S + + + + Y PE + +D+Y L
Sbjct: 142 IMISATNAVKVMDFGIARAIAD-SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 200
Query: 253 GILIWEVFNG--PLQSTNRKSL-------------SNIDNIPENLKRVYLELISERPNQR 297
G +++EV G P + S+ + + + +L V L+ +++ P R
Sbjct: 201 GCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 260
Query: 298 PNPAD 302
A
Sbjct: 261 YQTAA 265
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.2 bits (140), Expect = 1e-09
Identities = 43/274 (15%), Positives = 104/274 (37%), Gaps = 43/274 (15%)
Query: 111 LKTLRHPSILTFLDSVESP--SKSLVYLAVEYVEPIFYHLDNTLKENNEKK--QIYISWG 166
+ + P I+ +D E+ + + + +E ++ L + +++ ++ + S
Sbjct: 59 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD--GGELFSRIQDRGDQAFTEREASEI 116
Query: 167 IFQITRALSFLINDADLRHNHVNHTSIFINSC---GEWKLGGLEYMEKISEASCIPMKRY 223
+ I A+ +L + ++ H V ++ S KL + ++ + + + Y
Sbjct: 117 MKSIGEAIQYL-HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 175
Query: 224 SRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG--PLQSTNRKSLSN------- 274
+ Y Y PE S DM+ LG++++ + G P S + ++S
Sbjct: 176 TPY-----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 230
Query: 275 ----------IDNIPENLKRVYLELISERPNQRPNPAD-----FIMRNRKPGGYFKNDLI 319
+ E +K + L+ P QR + +IM++ K +
Sbjct: 231 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV----PQTPL 286
Query: 320 DALLFLEEIQMKDKIDKNKFFNGLASAIDKFPKL 353
L+E + + + K + + LA+ + ++
Sbjct: 287 HTSRVLKEDKERWEDVKEEMTSALATMRVDYEQI 320
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 57.8 bits (139), Expect = 1e-09
Identities = 35/228 (15%), Positives = 76/228 (33%), Gaps = 22/228 (9%)
Query: 91 TIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHL 148
T+ + LS + HP+++ V + V + E++E + L
Sbjct: 61 TLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTP--VMIITEFMENGSLDSFL 118
Query: 149 DNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208
+ + + + + I + +L D + H + +I +NS K+
Sbjct: 119 RQNDGQFTVIQLVGM---LRGIAAGMKYL-ADMNYVHRDLAARNILVNSNLVCKVSDFGL 174
Query: 209 MEKI-SEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG---PL 264
+ + S + + PE ++D++ GI++WEV + P
Sbjct: 175 SRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 234
Query: 265 QSTNRKSLSNI----------DNIPENLKRVYLELISERPNQRPNPAD 302
+ + N + P L ++ L+ + N RP
Sbjct: 235 WDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQ 282
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.1 bits (137), Expect = 2e-09
Identities = 33/227 (14%), Positives = 82/227 (36%), Gaps = 25/227 (11%)
Query: 91 TIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHL 148
T S E L ++ HP I+ + + ++ V++ +E + L
Sbjct: 42 TCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT---ENPVWIIMELCTLGELRSFL 98
Query: 149 DNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208
+ I +Q++ AL++L H + ++ ++S KLG
Sbjct: 99 QVRKYSLDLASLILY---AYQLSTALAYL-ESKRFVHRDIAARNVLVSSNDCVKLGDFGL 154
Query: 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTN 268
+ +++ + S+ + + PE+ ++D++ G+ +WE+ ++
Sbjct: 155 SRYMEDST---YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 211
Query: 269 RKSLSNI-------------DNIPENLKRVYLELISERPNQRPNPAD 302
+++ N P L + + + P++RP +
Sbjct: 212 GVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTE 258
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.1 bits (137), Expect = 2e-09
Identities = 32/215 (14%), Positives = 71/215 (33%), Gaps = 32/215 (14%)
Query: 108 VKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYISWG- 166
V + +L H +++ V +P +V E +L + K Q + G
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKMVT---ELAP------LGSLLDRLRKHQGHFLLGT 112
Query: 167 ----IFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKR 222
Q+ + +L H + ++ + + K+G M + +
Sbjct: 113 LSRYAVQVAEGMGYL-ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND--DHYV 169
Query: 223 YSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNG---PLQSTN---------- 268
+ SL + ++D + G+ +WE+F P N
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
Query: 269 -RKSLSNIDNIPENLKRVYLELISERPNQRPNPAD 302
+ L ++ P+++ V ++ + +P RP
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVA 264
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 57.0 bits (137), Expect = 3e-09
Identities = 26/205 (12%), Positives = 72/205 (35%), Gaps = 24/205 (11%)
Query: 108 VKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYISWGI 167
+ + T P I+ + +P K + ++ + L L ++ + + +
Sbjct: 58 LSLVSTGDCPFIVCMSYAFHTPDK--LSFILDLMNGG--DLHYHLSQHGVFSEADMRFYA 113
Query: 168 FQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYE 227
+I L + ++ + + + +I ++ G ++ L S+ Y
Sbjct: 114 AEIILGLEHM-HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM 172
Query: 228 DQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG--PLQSTNRKSLSNI---------- 275
++ + +++ + D + LG +++++ G P + K I
Sbjct: 173 ---APEVLQKGVAYDSSA--DWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE 227
Query: 276 --DNIPENLKRVYLELISERPNQRP 298
D+ L+ + L+ N+R
Sbjct: 228 LPDSFSPELRSLLEGLLQRDVNRRL 252
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.3 bits (135), Expect = 4e-09
Identities = 41/233 (17%), Positives = 80/233 (34%), Gaps = 29/233 (12%)
Query: 89 KVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHL 148
K + + E V LK ++HP+++T + E+ + V L +E V L
Sbjct: 45 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD--VILILELVA--GGEL 100
Query: 149 DNTLKENNEKKQIYISWGIFQITRAL----SFLINDADLRHNHVNHTSIFINSCGEWKLG 204
+ L E + + + QI + S I DL+ ++ + K+
Sbjct: 101 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK-PRIKII 159
Query: 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG-- 262
KI + + + PE DM+ +G++ + + +G
Sbjct: 160 DFGLAHKIDFGNEFKNIFGTPE-----FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 214
Query: 263 -PLQSTNRKSLSNI------------DNIPENLKRVYLELISERPNQRPNPAD 302
L T +++L+N+ N K L+ + P +R D
Sbjct: 215 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQD 267
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.0 bits (134), Expect = 7e-09
Identities = 32/255 (12%), Positives = 84/255 (32%), Gaps = 31/255 (12%)
Query: 74 TFWKFHGGKKKGSNEKV-------TIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSV 126
F + G EKV + S + L + ++ +P + L
Sbjct: 21 AFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGIC 80
Query: 127 ESPSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHN 186
+ + L+ + + + Y ++ ++ + QI + +++L D L H
Sbjct: 81 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC----VQIAKGMNYL-EDRRLVHR 135
Query: 187 HVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQST--YQIPENSLSHVTK 244
+ ++ + + K+ +++ K Y + + E+ L +
Sbjct: 136 DLAARNVLVKTPQHVKI----TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 191
Query: 245 CSTDMYGLGILIWEVFNG---PLQSTNRKSLSNI----------DNIPENLKRVYLELIS 291
+D++ G+ +WE+ P +S+I ++ + ++
Sbjct: 192 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 251
Query: 292 ERPNQRPNPADFIMR 306
+ RP + I+
Sbjct: 252 IDADSRPKFRELIIE 266
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.1 bits (132), Expect = 1e-08
Identities = 25/210 (11%), Positives = 65/210 (30%), Gaps = 23/210 (10%)
Query: 108 VKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISW 165
+ + L +P I+ + ++ + LV E P+ L +E +
Sbjct: 60 AQIMHQLDNPYIVRLIGVCQAEALMLVM---EMAGGGPLHKFLVGKREEIPVSNVAEL-- 114
Query: 166 GIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSR 225
+ Q++ + +L + + H + ++ + + K+ + + R +
Sbjct: 115 -LHQVSMGMKYL-EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 172
Query: 226 YEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG---PLQSTNRKSLSNI------- 275
+ PE +D++ G+ +WE + P + +
Sbjct: 173 KWPLK-WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM 231
Query: 276 ---DNIPENLKRVYLELISERPNQRPNPAD 302
P L + + + RP+
Sbjct: 232 ECPPECPPELYALMSDCWIYKWEDRPDFLT 261
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.2 bits (129), Expect = 2e-08
Identities = 51/261 (19%), Positives = 100/261 (38%), Gaps = 21/261 (8%)
Query: 81 GKKKGSNEKVTI----FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYL 136
K + ++E V + +D AL + LK L+H +I+ D + S K +
Sbjct: 21 AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80
Query: 137 AVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN 196
+ Y + E + ++ FQ+ + L F + ++ H + ++ IN
Sbjct: 81 EFCDQDLKKYFDSCNGDLDPEIVKSFL----FQLLKGLGFC-HSRNVLHRDLKPQNLLIN 135
Query: 197 SCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGIL 255
GE KL ++ A IP++ YS Y+ P+ + + S DM+ G +
Sbjct: 136 RNGELKLANF----GLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCI 191
Query: 256 IWEVFNGPLQSTNRKSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315
E+ N + L +++ + LKR++ L + Q P+ P
Sbjct: 192 FAELANA------GRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT 245
Query: 316 NDLIDALLFLEEIQMKDKIDK 336
L++ + L +D +
Sbjct: 246 TSLVNVVPKLNA-TGRDLLQN 265
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.1 bits (127), Expect = 4e-08
Identities = 48/244 (19%), Positives = 81/244 (33%), Gaps = 31/244 (12%)
Query: 81 GKKKGSNEKVTI----FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS--LV 134
G + +V + + + LK L+HP+I+ F DS ES K +
Sbjct: 28 GLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 87
Query: 135 YLAVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFL-INDADLRHNHVNHTSI 193
L E + L LK K + QI + L FL + H + +I
Sbjct: 88 VLVTELMT--SGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNI 145
Query: 194 FINS-CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGL 252
FI G K+G L + + AS + + PE + S D+Y
Sbjct: 146 FITGPTGSVKIGDL-GLATLKRASFAKAVIGTPE-----FMAPEMYEEKYDE-SVDVYAF 198
Query: 253 GILIWEVFNG--------PLQSTNRKSLSNI------DNIPENLKRVYLELISERPNQRP 298
G+ + E+ R+ S + +K + I + ++R
Sbjct: 199 GMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERY 258
Query: 299 NPAD 302
+ D
Sbjct: 259 SIKD 262
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.3 bits (127), Expect = 4e-08
Identities = 35/248 (14%), Positives = 77/248 (31%), Gaps = 29/248 (11%)
Query: 79 HGGKKKGSNEKV---TIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVY 135
G K +V T+ S L+ +K ++ L V
Sbjct: 42 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP--TL 99
Query: 136 LAVEYVE--PIFYHLDNTLKENNEKKQI------YISWGIFQITRALSFLINDADLRHNH 187
+ +E + + +L + + + +I +++L + + H
Sbjct: 100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HRD 158
Query: 188 VNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCST 247
+ + + K+G I E ++ + + PE+ V +
Sbjct: 159 LAARNCMVAEDFTVKIGDFGMTRDIYETD--YYRKGGKGLLPVRWMSPESLKDGVFTTYS 216
Query: 248 DMYGLGILIWEVFNG---PLQSTNRKS----------LSNIDNIPENLKRVYLELISERP 294
D++ G+++WE+ P Q + + L DN P+ L + P
Sbjct: 217 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNP 276
Query: 295 NQRPNPAD 302
RP+ +
Sbjct: 277 KMRPSFLE 284
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.9 bits (126), Expect = 5e-08
Identities = 28/208 (13%), Positives = 71/208 (34%), Gaps = 18/208 (8%)
Query: 108 VKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYISWGI 167
+ H +I+ + ++ + L E + + + + GI
Sbjct: 60 AGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGI 119
Query: 168 FQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYE 227
+ + + + H + +I +NS K+ + ++ E S +
Sbjct: 120 AAGMKY----LANMNYVHRDLAARNILVNSNLVCKVSD-FGLSRVLEDDPEATYTTSGGK 174
Query: 228 DQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG----PLQSTNRKSLSNID------- 276
+ PE ++D++ GI++WEV + +N + + I+
Sbjct: 175 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPT 234
Query: 277 --NIPENLKRVYLELISERPNQRPNPAD 302
+ P + ++ ++ + +RP AD
Sbjct: 235 PMDCPSAIYQLMMQCWQQERARRPKFAD 262
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 52.4 bits (125), Expect = 7e-08
Identities = 29/238 (12%), Positives = 77/238 (32%), Gaps = 22/238 (9%)
Query: 82 KKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLR-HPSILTFLDSVESPSKSLVYLAVEY 140
K + + + E L V L+ + HP+I+ D+ E+ + +L +
Sbjct: 34 KIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF--FFLVFDL 91
Query: 141 VEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE 200
++ L + L E + + + + L + ++ H + +I ++
Sbjct: 92 MKKG--ELFDYLTEKVTLSEKETRKIMRALLEVICAL-HKLNIVHRDLKPENILLDDDMN 148
Query: 201 WKLGGLEYMEKISEASCIPMKRYSRYE-DQSTYQIPENSLSHVTKCSTDMYGLGILIWEV 259
KL + ++ + + + N DM+ G++++ +
Sbjct: 149 IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 208
Query: 260 FNG--PLQSTNRKSL-------------SNIDNIPENLKRVYLELISERPNQRPNPAD 302
G P + + D+ + +K + + +P +R +
Sbjct: 209 LAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEE 266
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.8 bits (125), Expect = 1e-07
Identities = 32/224 (14%), Positives = 71/224 (31%), Gaps = 16/224 (7%)
Query: 358 KVLPQLINAFEYGEAGASVLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLL 417
+ + + N+ L L ++G ++ Q ++ +++ F S +S
Sbjct: 817 QFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSG-QLELKSVILEAFSSPSEEVKSAASY 875
Query: 418 QLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRH 477
L + L + + P + + S+ + + L
Sbjct: 876 ALGSISVGNLPEYL------PFVLQEITSQPKRQYLLLHSLKEIISSASVVGLKPYVENI 929
Query: 478 FARLQA--KDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVL 535
+A L + + G R C+GK+ L+ + AR++ V
Sbjct: 930 WALLLKHCECAEEGTRNVVAECLGKLTLIDPET-----LLPRLKGYLISGSSYARSSVVT 984
Query: 536 ALAATQQYF--LLSEVAQRILPALCQLSTDPEKSVRDSAFKTIK 577
A+ T + + + + + DP+ +VR A T
Sbjct: 985 AVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFN 1028
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.7 bits (96), Expect = 5e-04
Identities = 24/165 (14%), Positives = 49/165 (29%), Gaps = 13/165 (7%)
Query: 445 DTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHH 504
D N ++ VK + L K+ VET+ D+ +R +++ + +
Sbjct: 56 DKNGEVQNLAVKCLGPLVSKVK--EYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGE 113
Query: 505 LHPQIRQKVLISAFSRAM---------RDPFPPARNAGVLALAATQQYF--LLSEVAQRI 553
L P L + + + + + + +A LL I
Sbjct: 114 LPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSI 173
Query: 554 LPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQVSENPSLRESMEA 598
L L T P +VR + + + + +
Sbjct: 174 LTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHLLSE 218
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (90), Expect = 0.002
Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 5/122 (4%)
Query: 500 KIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQ 559
K + L +KV + + + D +N V L + + I+ LC
Sbjct: 33 KDSIKLDDDSERKV-VKMILKLLEDKNGEVQNLAVKCLGPLVSK-VKEYQVETIVDTLCT 90
Query: 560 LSTDPEKSVRDSAFKTIKGFLGKLEQVSENPSLRESMEADVHTATPSLSNAAATWADWAV 619
++ +RD + +K +G+L S +L T L++A A D +V
Sbjct: 91 NMLSDKEQLRDISSIGLKTVIGELPPASSGSAL---AANVCKKITGRLTSAIAKQEDVSV 147
Query: 620 TA 621
Sbjct: 148 QL 149
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 51.4 bits (122), Expect = 2e-07
Identities = 36/264 (13%), Positives = 75/264 (28%), Gaps = 43/264 (16%)
Query: 77 KFHGGKKKGSNEKV---TIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133
+ G V + SAD + +P+I+ L
Sbjct: 33 RAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP-- 90
Query: 134 VYLAVEYVE-----------------PIFYHLDNTLKENNEKKQIYISWG-----IFQIT 171
+ L EY+ + + +T + +S Q+
Sbjct: 91 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVA 150
Query: 172 RALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQST 231
+++L + H + + + K+ I A K
Sbjct: 151 AGMAYLSERKFV-HRDLATRNCLVGENMVVKIADFGLSRNIYSAD--YYKADGNDAIPIR 207
Query: 232 YQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNI-------------DNI 278
+ PE+ + +D++ G+++WE+F+ LQ + + +N
Sbjct: 208 WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENC 267
Query: 279 PENLKRVYLELISERPNQRPNPAD 302
P L + S+ P RP+
Sbjct: 268 PLELYNLMRLCWSKLPADRPSFCS 291
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.2 bits (122), Expect = 2e-07
Identities = 39/204 (19%), Positives = 78/204 (38%), Gaps = 19/204 (9%)
Query: 108 VKKLKTLR--HPSILTFLDSVESPSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYISW 165
V LK + ++ LD E P L +E EP+ L + + E ++
Sbjct: 58 VVLLKKVSSGFSGVIRLLDWFERPDS--FVLILERPEPV-QDLFDFITERGALQEELARS 114
Query: 166 GIFQITRALSFLINDADLRHNHVNHTSIFIN-SCGEWKLGGLEYMEKISEASCIPMKRYS 224
+Q+ A+ ++ + H + +I I+ + GE KL + + Y+
Sbjct: 115 FFWQVLEAVRHC-HNCGVLHRDIKDENILIDLNRGELKLIDF------GSGALLKDTVYT 167
Query: 225 RYEDQSTYQIPENSLSH-VTKCSTDMYGLGILIWEVFNG--PLQSTN---RKSLSNIDNI 278
++ Y PE H S ++ LGIL++++ G P + R + +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 227
Query: 279 PENLKRVYLELISERPNQRPNPAD 302
+ + ++ RP+ RP +
Sbjct: 228 SSECQHLIRWCLALRPSDRPTFEE 251
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.6 bits (120), Expect = 4e-07
Identities = 35/238 (14%), Positives = 78/238 (32%), Gaps = 35/238 (14%)
Query: 108 VKKLKTLRHPSILTFLDSVESPSKSL--VYLAVEYVE--PIFYHLDNTLKENNEKKQIYI 163
+ + LRH +IL F+ + + + ++L +Y E +F +L+ ++ +
Sbjct: 48 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 107
Query: 164 SWGIFQITRALSFLINDADLR-------HNHVNHTSIFINSCGEWKLGGLEYMEKISEAS 216
L+ L + H + +I + G + L + A+
Sbjct: 108 -----STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 162
Query: 217 CIPMKRYSRYEDQSTYQIPENSLSHVTKCS------TDMYGLGILIWEVFNGPLQSTNRK 270
+ Y PE + D+Y +G++ WE+
Sbjct: 163 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS------ 216
Query: 271 SLSNIDNIPENLKRVYLELISERPNQ---RPNPADFIMRNRKPGGYFKNDLIDALLFL 325
I I E+ + Y +L+ P+ R + +R P + + + + +
Sbjct: 217 ----IGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKI 270
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.2 bits (119), Expect = 4e-07
Identities = 43/227 (18%), Positives = 89/227 (39%), Gaps = 16/227 (7%)
Query: 81 GKKKGSNEKVTI----FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYL 136
+ K + E V + ++ A+ + LK L HP+I+ LD + + +K +YL
Sbjct: 21 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK--LYL 78
Query: 137 AVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN 196
E++ + + S+ +FQ+ + L+F + + H + ++ IN
Sbjct: 79 VFEFLHQDLKKFMDASALTGIPLPLIKSY-LFQLLQGLAFC-HSHRVLHRDLKPQNLLIN 136
Query: 197 SCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGIL 255
+ G KL ++ A +P++ Y+ Y+ PE L + D++ LG +
Sbjct: 137 TEGAIKLAD----FGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 192
Query: 256 IWEVFNGPL---QSTNRKSLSNIDNIPENLKRVYLELISERPNQRPN 299
E+ + L I V ++ P+ +P+
Sbjct: 193 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.2 bits (119), Expect = 5e-07
Identities = 40/258 (15%), Positives = 84/258 (32%), Gaps = 47/258 (18%)
Query: 81 GKKKGSNEKVT-----IFLNDSADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSKSLV 134
+ K ++ + S D + ++ L L HP+I+ L + E +
Sbjct: 29 ARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY--L 86
Query: 135 YLAVEYVE-----------------PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFL 177
YLA+EY P F ++T + ++ ++ + R + +L
Sbjct: 87 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF---AADVARGMDYL 143
Query: 178 INDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPEN 237
+ H + +I + K+ M R + E+
Sbjct: 144 -SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR-----WMAIES 197
Query: 238 SLSHVTKCSTDMYGLGILIWEVFNG---PLQSTNRKSLSNI----------DNIPENLKR 284
V ++D++ G+L+WE+ + P L N + +
Sbjct: 198 LNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYD 257
Query: 285 VYLELISERPNQRPNPAD 302
+ + E+P +RP+ A
Sbjct: 258 LMRQCWREKPYERPSFAQ 275
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.5 bits (117), Expect = 7e-07
Identities = 40/227 (17%), Positives = 83/227 (36%), Gaps = 21/227 (9%)
Query: 108 VKKLKTLRHPSILTFLDSVESPS---KSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYIS 164
++ L+T HP+++ D ++ + L E+V+ + + E +
Sbjct: 61 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 120
Query: 165 WGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYS 224
+FQ+ R L FL + + H + +I + S G+ KL S + +
Sbjct: 121 M-MFQLLRGLDFL-HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVT 178
Query: 225 RYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG--PLQ-STNRKSLSNIDNI--- 278
+ Y+ PE L D++ +G + E+F + S++ L I ++
Sbjct: 179 LW-----YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 233
Query: 279 --PENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDLIDALL 323
E+ R ++ P + + + G DL+ L
Sbjct: 234 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGK---DLLLKCL 277
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.4 bits (117), Expect = 8e-07
Identities = 40/257 (15%), Positives = 80/257 (31%), Gaps = 39/257 (15%)
Query: 77 KFHGGKKKGSNEKV---TIFLNDSADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSKS 132
+G K + V + + E +S +K L L H +I+ L +
Sbjct: 43 TAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP- 101
Query: 133 LVYLAVEYVE-----------PIFYHLDNTLKENNEKKQIYISWG-----IFQITRALSF 176
+ EY + T E ++ + +Q+ + ++F
Sbjct: 102 -TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAF 160
Query: 177 LINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPE 236
L + H + +I + K+ I S +K +R + PE
Sbjct: 161 L-ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL--PVKWMAPE 217
Query: 237 NSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKSLSNI-------------DNIPENL 282
+ + V +D++ GI +WE+F+ G S ++ P +
Sbjct: 218 SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEM 277
Query: 283 KRVYLELISERPNQRPN 299
+ P +RP
Sbjct: 278 YDIMKTCWDADPLKRPT 294
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 49.0 bits (116), Expect = 1e-06
Identities = 27/245 (11%), Positives = 64/245 (26%), Gaps = 29/245 (11%)
Query: 81 GKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEY 140
G +N++V I + K L + + + L ++
Sbjct: 24 GTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQ-EGLHNVLVIDL 82
Query: 141 VEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFL----INDADLRHNHVNHTSIFIN 196
+ P L + K + ++ Q+ + + + D++ ++
Sbjct: 83 LGPSLEDLLDLCGRKFSVKTVAMA--AKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSK 140
Query: 197 SCGEWKL---GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLG 253
+ + G +++ IP + + Y L D+ LG
Sbjct: 141 NANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALG 200
Query: 254 ILIWEVFNGPLQSTNRKSLSNI-------------------DNIPENLKRVYLELISERP 294
+ G L K+ +N PE + +
Sbjct: 201 HVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAF 260
Query: 295 NQRPN 299
+ P+
Sbjct: 261 DATPD 265
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.6 bits (115), Expect = 2e-06
Identities = 38/267 (14%), Positives = 86/267 (32%), Gaps = 48/267 (17%)
Query: 77 KFHGGKKKGSNEKV---TIFLNDSADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSKS 132
+G K G + +V + + E +S +K + L H +I+ L +
Sbjct: 57 TAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP- 115
Query: 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWG-------------------IFQIT 171
+YL EY + +L + ++ +E + Y + +Q+
Sbjct: 116 -IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVA 174
Query: 172 RALSFLINDADLRHNHVNHTSIFINSCGEWKLG--GLEYMEKISEASCIPMKRYSRYEDQ 229
+ + FL H + ++ + K+ GL + +
Sbjct: 175 KGMEFL-EFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK-- 231
Query: 230 STYQIPENSLSHVTKCSTDMYGLGILIWEVFNG---PLQSTNRKS-----------LSNI 275
+ PE+ + +D++ GIL+WE+F+ P + +
Sbjct: 232 --WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQP 289
Query: 276 DNIPENLKRVYLELISERPNQRPNPAD 302
E + + + +RP+ +
Sbjct: 290 FYATEEIYIIMQSCWAFDSRKRPSFPN 316
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 48.0 bits (113), Expect = 2e-06
Identities = 41/246 (16%), Positives = 87/246 (35%), Gaps = 23/246 (9%)
Query: 89 KVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLVYLAVEYVEPIFYHL 148
K + + + LK L+H +I+ D + + + + L E++
Sbjct: 32 KKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKR--LVLVFEHL--DQDLK 87
Query: 149 DNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208
+ + + Q+ +++ +D + H + ++ IN GE K+
Sbjct: 88 KLLDVCEGGLESVTAKSFLLQLLNGIAYC-HDRRVLHRDLKPQNLLINREGELKIADF-- 144
Query: 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSH-VTKCSTDMYGLGILIWEVFNG--PLQ 265
++ A IP+++Y+ Y+ P+ + + D++ +G + E+ NG
Sbjct: 145 --GLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFP 202
Query: 266 -STNRKSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN-------D 317
+ L I I ++E P PN F + P F D
Sbjct: 203 GVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN---FTVYEPLPWESFLKGLDESGID 259
Query: 318 LIDALL 323
L+ +L
Sbjct: 260 LLSKML 265
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.9 bits (113), Expect = 3e-06
Identities = 40/267 (14%), Positives = 88/267 (32%), Gaps = 20/267 (7%)
Query: 108 VKKLKTLRHPSILT----FLDSVESPSKSLVYLAVEYVEPIFYH-LDNTLKENNEKKQIY 162
++ ++ L H +I+ F S E + + L ++YV Y + + IY
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 163 ISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGE-WKLGGLEYMEKISEASCIPMK 221
+ ++Q+ R+L+++ + + H + ++ ++ KL +++
Sbjct: 124 VKLYMYQLFRSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 182
Query: 222 RYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSNIDNIPEN 281
SRY + S D++ G ++ E+ G + + I +
Sbjct: 183 ICSRYYRAPELIFGATDYTS----SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 282 LKRVYLELISE-RPNQRPNPADFIMRNRKPGGYFKNDLIDALLFLEEIQMKD-------- 332
L E I E PN I + + +A+ +
Sbjct: 239 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 298
Query: 333 KIDKNKFFNGLASAIDKFPKLISCHKV 359
+ + FF+ L K P +
Sbjct: 299 EACAHSFFDELRDPNVKLPNGRDTPAL 325
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (112), Expect = 3e-06
Identities = 39/241 (16%), Positives = 83/241 (34%), Gaps = 22/241 (9%)
Query: 76 WKFHGGKKKGSNEKVTI------FLNDSADTYEPALSYVKKLKTLRH-PSILTFLDSVES 128
+ + + + + A T E + + L+ +R P ++T + ++
Sbjct: 41 FLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT 100
Query: 129 PSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHV 188
+K ++L ++Y L L + + + + +I AL L + + + +
Sbjct: 101 ETK--LHLILDY--INGGELFTHLSQRERFTEHEVQIYVGEIVLALEHL-HKLGIIYRDI 155
Query: 189 NHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTD 248
+I ++S G L ++ + + I S K + D
Sbjct: 156 KLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDK-AVD 214
Query: 249 MYGLGILIWEVFNG--PLQSTNRKSLSNIDNIPENLKRVYLELISERPNQRPNPA-DFIM 305
+ LG+L++E+ G P K N + R L+ P + A D I
Sbjct: 215 WWSLGVLMYELLTGASPFTVDGEK------NSQAEISRRILKSEPPYPQEMSALAKDLIQ 268
Query: 306 R 306
R
Sbjct: 269 R 269
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.4 bits (112), Expect = 4e-06
Identities = 43/266 (16%), Positives = 95/266 (35%), Gaps = 28/266 (10%)
Query: 74 TFWKFHGGKKKGSNEKVTI-----FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVES 128
+F + H + + + + + E L + HP I+ + +
Sbjct: 16 SFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD 75
Query: 129 PSKSLVYLAVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHV 188
+ +++ ++Y+E L + L+++ + ++ AL +L + D+ + +
Sbjct: 76 AQQ--IFMIMDYIEG--GELFSLLRKSQRFPNPVAKFYAAEVCLALEYL-HSKDIIYRDL 130
Query: 189 NHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTD 248
+I ++ G K+ + + + + Y PE + S D
Sbjct: 131 KPENILLDKNGHIKITDFGFAKYVPD-------VTYTLCGTPDYIAPEVVSTKPYNKSID 183
Query: 249 MYGLGILIWEVFNGPL---QSTNRKSLSNI--------DNIPENLKRVYLELISERPNQR 297
+ GILI+E+ G S K+ I E++K + LI+ +QR
Sbjct: 184 WWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQR 243
Query: 298 PNPADFIMRNRKPGGYFKNDLIDALL 323
+ K +FK + + LL
Sbjct: 244 LGNLQNGTEDVKNHPWFKEVVWEKLL 269
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.6 bits (107), Expect = 1e-05
Identities = 37/258 (14%), Positives = 80/258 (31%), Gaps = 36/258 (13%)
Query: 76 WKFHGGKKKGSNEKV---TIFLNDSADTYEPALSYVKKLKTL-RHPSILTFLDSVESPSK 131
K KV + + + +S ++ +K + +H +I+ L +
Sbjct: 34 AIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP 93
Query: 132 SLVYLAVEYVE--PIFYHL-------DNTLKENNEKKQIYISWG-----IFQITRALSFL 177
+Y+ VEY + +L + + +S +Q+ R + +L
Sbjct: 94 --LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 151
Query: 178 INDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPEN 237
H + ++ + K+ I K+ + + PE
Sbjct: 152 -ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID--YYKKTTNGRLPVKWMAPEA 208
Query: 238 SLSHVTKCSTDMYGLGILIWEVFNG---PLQSTNRKSLSNI----------DNIPENLKR 284
+ +D++ G+L+WE+F P + L + N L
Sbjct: 209 LFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM 268
Query: 285 VYLELISERPNQRPNPAD 302
+ + P+QRP
Sbjct: 269 MMRDCWHAVPSQRPTFKQ 286
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.9 bits (105), Expect = 3e-05
Identities = 39/271 (14%), Positives = 86/271 (31%), Gaps = 28/271 (10%)
Query: 81 GKKKGSNEKVTI----FLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK----S 132
+ V I + + A + +K + H +I++ L+
Sbjct: 36 AYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 95
Query: 133 LVYLAVEYVEPIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTS 192
VYL +E ++ E + ++ Y+ ++Q+ + L + A + H + ++
Sbjct: 96 DVYLVMELMD--ANLCQVIQMELDHERMSYL---LYQMLCGIKHL-HSAGIIHRDLKPSN 149
Query: 193 IFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGL 252
I + S K ++ + + Y Y+ PE L K + D++ +
Sbjct: 150 IVVKSDCTLK-----ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 204
Query: 253 GILIWEVFNG--PLQSTN-----RKSLSNIDNIPENLKRVYLELISERPNQRPNPADFIM 305
G ++ E+ + K + + + + RP A
Sbjct: 205 GCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTF 264
Query: 306 RNRKPGGYFKNDLIDALLFLEEIQMKDKIDK 336
P F D L + +D + K
Sbjct: 265 PKLFPDSLFPADSEHNKLKASQA--RDLLSK 293
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.4 bits (96), Expect = 2e-04
Identities = 37/257 (14%), Positives = 81/257 (31%), Gaps = 34/257 (13%)
Query: 77 KFHGGKKKGSNEKV---TIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133
G K + V + + + +S +K L + H + L +
Sbjct: 33 DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 92
Query: 134 VYLAVEYVE--PIFYHLDNTLKENNEKK-------QIYISWG-----IFQITRALSFLIN 179
+ + VE+ + + +L + E K + +++ FQ+ + + FL
Sbjct: 93 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL-A 151
Query: 180 DADLRHNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL 239
H + +I ++ K+ I + R + PE
Sbjct: 152 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP--DYVRKGDARLPLKWMAPETIF 209
Query: 240 SHVTKCSTDMYGLGILIWEVFNGPLQS--------------TNRKSLSNIDNIPENLKRV 285
V +D++ G+L+WE+F+ + D + +
Sbjct: 210 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 269
Query: 286 YLELISERPNQRPNPAD 302
L+ P+QRP ++
Sbjct: 270 MLDCWHGEPSQRPTFSE 286
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 41.4 bits (96), Expect = 3e-04
Identities = 49/261 (18%), Positives = 97/261 (37%), Gaps = 18/261 (6%)
Query: 81 GKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLR-HPSILTFLDSVESPSKSLVYLAVE 139
+NEKV + + + +K L+ LR P+I+T D V+ P L E
Sbjct: 54 AINITNNEKVVVKILKPVKK-KKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 112
Query: 140 YVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC 198
+V F L TL + + I + +++I +AL + + + + H + +
Sbjct: 113 HVNNTDFKQLYQTLTDYD------IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 166
Query: 199 GEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTK-CSTDMYGLGILIW 257
+ +L E ++ SRY ++ PE + + S DM+ LG ++
Sbjct: 167 RKLRLIDWGLAEFYHPGQEYNVRVASRY-----FKGPELLVDYQMYDYSLDMWSLGCMLA 221
Query: 258 EVFNG--PLQSTNRKSLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315
+ P + + + I + L L ++ N +P + R ++
Sbjct: 222 SMIFRKEPFFHGH-DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 280
Query: 316 NDLIDALLFLEEIQMKDKIDK 336
+ L + D +DK
Sbjct: 281 RFVHSENQHLVSPEALDFLDK 301
|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Length = 458 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.3 bits (95), Expect = 4e-04
Identities = 22/197 (11%), Positives = 58/197 (29%), Gaps = 14/197 (7%)
Query: 397 VPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVK 456
++ S+ + + + D + + T+ + ++
Sbjct: 260 FAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQ 319
Query: 457 SIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLIS 516
++ + + + + +A + ++
Sbjct: 320 YLVPILTQTLTKQDENDDDDDWNPCKA-----------AGVCLMLLATCCEDDIVPHVLP 368
Query: 517 AFSRAMRDPFPPARNAGVLALAA---TQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAF 573
+++P R+A V+A + L + + +P L +L DP VRD+A
Sbjct: 369 FIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAA 428
Query: 574 KTIKGFLGKLEQVSENP 590
T+ L + + N
Sbjct: 429 WTVGRICELLPEAAIND 445
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 852 | |||
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.73 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.5 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.48 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 98.61 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 98.01 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 97.99 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 97.98 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 97.94 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 97.92 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 97.91 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 97.87 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 97.82 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 97.72 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 97.69 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 97.62 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 97.55 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 97.54 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 97.46 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 97.37 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 97.34 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 97.27 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 97.26 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 97.06 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.06 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 96.99 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 96.97 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 96.86 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 96.79 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 96.58 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 96.27 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 96.01 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 95.66 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 95.43 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 95.26 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 94.49 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 93.69 | |
| d1xm9a1 | 457 | Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | 93.67 | |
| d1xm9a1 | 457 | Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | 92.6 | |
| d1wa5c_ | 959 | Exportin Cse1p {Baker's yeast (Saccharomyces cerev | 92.55 | |
| d1lsha1 | 336 | Lipovitellin-phosvitin complex, superhelical domai | 90.92 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 85.55 | |
| d1wa5c_ | 959 | Exportin Cse1p {Baker's yeast (Saccharomyces cerev | 80.02 |
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-46 Score=396.52 Aligned_cols=244 Identities=13% Similarity=0.194 Sum_probs=208.1
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
..+|++++.|| +|+||+||+|+++.+|+.||||+++.. ...+.+.+|+++|++++||||++++++++++
T Consensus 4 ~~dy~~~~~lG--------~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~ 75 (271)
T d1nvra_ 4 VEDWDLVQTLG--------EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG 75 (271)
T ss_dssp TTEEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred CcceEEEEEEe--------cCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccC
Confidence 34699999999 999999999999999999999999872 2345688999999999999999999999998
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+.+||||||+. +|.++|. ..+.+++..++.++.||+.||.||| +.||+||||||+||+++.+|.+||+|||
T Consensus 76 --~~~~ivmEy~~gg~L~~~l~----~~~~l~e~~~~~i~~qi~~al~ylH-~~~IiHrDiKp~NILl~~~~~~KL~DFG 148 (271)
T d1nvra_ 76 --NIQYLFLEYCSGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLH-GIGITHRDIKPENLLLDERDNLKISDFG 148 (271)
T ss_dssp --TEEEEEEECCTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEECTTCCEEECCCT
T ss_pred --ceeEEEEeccCCCcHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHH-HcCCccCcccHHHEEECCCCCEEEccch
Confidence 99999999998 7888773 3467999999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCC-CcchhHHhHHHHHHHHHhCCCCCCCCccc--------------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVT-KCSTDMYGLGILIWEVFNGPLQSTNRKSL-------------- 272 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~-~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------------- 272 (852)
+++....... ........||+.|+|||++.+..+ +.++|||||||++|||++|.+||.+....
T Consensus 149 ~a~~~~~~~~--~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~ 226 (271)
T d1nvra_ 149 LATVFRYNNR--ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 226 (271)
T ss_dssp TCEECEETTE--ECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTS
T ss_pred hheeeccCCc--cccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC
Confidence 9985533211 122335679999999999965554 67899999999999999999999543221
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchH
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~l 318 (852)
.....+++.+.+++.+||+.||++|||+.++++| +||+.++
T Consensus 227 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h-----pwf~~~l 267 (271)
T d1nvra_ 227 NPWKKIDSAPLALLHKILVENPSARITIPDIKKD-----RWYNKPL 267 (271)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC-----TTTTCCC
T ss_pred CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC-----HhhCcCC
Confidence 1235789999999999999999999999999997 9997653
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-45 Score=395.22 Aligned_cols=238 Identities=16% Similarity=0.211 Sum_probs=211.1
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.+|++.+.|| .|+||+||+|+++.+|+.||||+++. ....+.+.+|+.+|++++||||++++++++++
T Consensus 20 ~~Y~~~~~iG--------~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~-- 89 (293)
T d1yhwa1 20 KKYTRFEKIG--------QGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-- 89 (293)
T ss_dssp TTBCSCEECC--------CSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEET--
T ss_pred cccEEEEEEe--------cCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEEC--
Confidence 4699999999 99999999999999999999999987 44567899999999999999999999999988
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+.+||||||+. +|.+++.+ ..+++..++.++.||+.||.||| +.||+||||||+|||++.+|.+||+|||++
T Consensus 90 ~~~~ivmEy~~gg~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~yLH-~~~iiHrDiKp~NILl~~~~~vkl~DFG~a 163 (293)
T d1yhwa1 90 DELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLH-SNQVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (293)
T ss_dssp TEEEEEEECCTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred CEEEEEEEecCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCcHHHeEECCCCcEeeccchhh
Confidence 89999999998 78887632 46999999999999999999999 899999999999999999999999999999
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------ccCc
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS--------------LSNI 275 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~--------------l~~~ 275 (852)
+.+... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+... ....
T Consensus 164 ~~~~~~----~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (293)
T d1yhwa1 164 AQITPE----QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP 239 (293)
T ss_dssp EECCST----TCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSG
T ss_pred eeeccc----cccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCc
Confidence 855322 1222346799999999999888899999999999999999999999965432 2334
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
..+++.++++|.+||..||.+|||+.++++| +||+.
T Consensus 240 ~~~s~~~~~li~~~L~~dP~~R~s~~eil~H-----p~~~~ 275 (293)
T d1yhwa1 240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQH-----QFLKI 275 (293)
T ss_dssp GGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC-----GGGGG
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhcC-----HhhCC
Confidence 6789999999999999999999999999997 89863
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-45 Score=390.26 Aligned_cols=236 Identities=20% Similarity=0.302 Sum_probs=210.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
+|++++.|| +|+||+||+|+++.+|+.||||++.+ ......+.+|+++|+.++||||++++++++++
T Consensus 7 dy~i~~~iG--------~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~ 78 (263)
T d2j4za1 7 DFEIGRPLG--------KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 78 (263)
T ss_dssp GEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred HeEEEEEEe--------cCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEEC
Confidence 499999999 99999999999999999999999975 45567889999999999999999999999988
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+.+||||||+. +|.+++.+ .+.+++..+..++.||+.||.||| +.||+||||||+||+++.+|.+||+|||
T Consensus 79 --~~~~ivmEy~~~g~L~~~l~~----~~~l~e~~~~~i~~qi~~al~~lH-~~~ivHrDiKp~Nill~~~~~~kl~DFG 151 (263)
T d2j4za1 79 --TRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCH-SKRVIHRDIKPENLLLGSAGELKIADFG 151 (263)
T ss_dssp --SEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred --CEEEEEEeecCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeeeeccccceecCCCCEeecccc
Confidence 99999999998 79888843 257999999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcC
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNID 276 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~ 276 (852)
++..... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+. ...+.
T Consensus 152 ~a~~~~~------~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p~ 225 (263)
T d2j4za1 152 WSVHAPS------SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 225 (263)
T ss_dssp SCSCCCC------CCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCT
T ss_pred eeeecCC------CcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCc
Confidence 9875432 122346789999999999888899999999999999999999999965432 22346
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.+|+.+.+++.+||..||.+|||+.++++| +||..
T Consensus 226 ~~s~~~~~li~~~L~~dp~~R~t~~eil~h-----p~~~~ 260 (263)
T d2j4za1 226 FVTEGARDLISRLLKHNPSQRPMLREVLEH-----PWITA 260 (263)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHTC-----HHHHH
T ss_pred cCCHHHHHHHHHHccCCHhHCcCHHHHHcC-----cCcCC
Confidence 789999999999999999999999999997 78753
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-45 Score=388.74 Aligned_cols=239 Identities=17% Similarity=0.239 Sum_probs=197.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
.|++.+.|| .|+||+||+|+++.+|+.||||+++.. ...+.+.+|+++|++++||||+++++++.+..
T Consensus 5 dy~~~~~iG--------~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~ 76 (269)
T d2java1 5 DYEVLYTIG--------TGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT 76 (269)
T ss_dssp GEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC--
T ss_pred hCEEeEEEe--------cCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCC
Confidence 599999999 999999999999999999999999872 23456889999999999999999999987643
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CceecccCCCCEEEccCCcEEE
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDA-----DLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~-----~ivH~DIkp~NIlV~~~g~~KL 203 (852)
.+.+||||||+. +|.+++.+.......+++..++.++.||+.||.||| +. +|+||||||+|||++.+|.+||
T Consensus 77 ~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH-~~~~~~~~IiHrDiKp~NIll~~~~~vkl 155 (269)
T d2java1 77 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH-RRSDGGHTVLHRDLKPANVFLDGKQNVKL 155 (269)
T ss_dssp --CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH-HHCC---------CCGGGEEECTTSCEEE
T ss_pred CCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH-HhcCCCCCEEeCcCchhhcCcCCCCcEEE
Confidence 467999999998 799999766666778999999999999999999999 54 4999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----------- 272 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----------- 272 (852)
+|||+++.+.... .......||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..
T Consensus 156 ~DFG~a~~~~~~~----~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~ 231 (269)
T d2java1 156 GDFGLARILNHDT----SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF 231 (269)
T ss_dssp CCHHHHHHC---------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC
T ss_pred eeccceeecccCC----CccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC
Confidence 9999998654321 1223467899999999998888999999999999999999999999654221
Q ss_pred -cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 273 -SNIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 273 -~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.....+|+.+.+++.+||..||.+|||+.++++|
T Consensus 232 ~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h 266 (269)
T d2java1 232 RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 266 (269)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 2345789999999999999999999999999997
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-44 Score=388.57 Aligned_cols=235 Identities=12% Similarity=0.184 Sum_probs=204.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
+|++++.|| .|+||+||+|+++.+|+.||||++++ ....+.+.+|+++|++++||||++++++++++
T Consensus 9 dy~i~~~lG--------~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 80 (288)
T d1uu3a_ 9 DFKFGKILG--------EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD 80 (288)
T ss_dssp GEEEEEEEE--------ECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECS
T ss_pred CCEEEEEEe--------eCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEEC
Confidence 499999999 99999999999999999999999976 45667899999999999999999999999988
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+.+||||||+. +|.+++.. .+.+++..++.++.||+.||.||| +.||+||||||+||+++.+|.+||+|||
T Consensus 81 --~~~~ivmEy~~gg~L~~~~~~----~~~l~e~~~~~~~~qi~~al~ylH-~~~iiHrDiKp~NIll~~~~~vkl~DFG 153 (288)
T d1uu3a_ 81 --EKLYFGLSYAKNGELLKYIRK----IGSFDETCTRFYTAEIVSALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFG 153 (288)
T ss_dssp --SEEEEEECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred --CEEEEEEEccCCCCHHHhhhc----cCCCCHHHHHHHHHHHHHHHHhhc-cccEEcCcCCccccccCCCceEEecccc
Confidence 99999999998 79888743 267999999999999999999999 9999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcC
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNID 276 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~ 276 (852)
+++.+.... .........||+.|+|||++.+..++.++|||||||++|||++|..||.+.+. ...+.
T Consensus 154 ~a~~~~~~~--~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p~ 231 (288)
T d1uu3a_ 154 TAKVLSPES--KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 231 (288)
T ss_dssp TCEECC------------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCT
T ss_pred cceecccCC--cccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCCc
Confidence 987543211 11222346799999999999888899999999999999999999999965422 23356
Q ss_pred CCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 277 NIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.+++.+.++|++||..||.+|||+.+++.+
T Consensus 232 ~~s~~~~~li~~~L~~dP~~R~t~~e~~~~ 261 (288)
T d1uu3a_ 232 KFFPKARDLVEKLLVLDATKRLGCEEMEGY 261 (288)
T ss_dssp TCCHHHHHHHHTTSCSSGGGSTTSGGGTCH
T ss_pred cCCHHHHHHHHHHccCCHhHCcCHHHHcCC
Confidence 789999999999999999999999986543
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-44 Score=396.39 Aligned_cols=240 Identities=14% Similarity=0.183 Sum_probs=207.1
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
+..+|++.+.|| .|+||+||+|+++.+|+.||||+++. ......+.+|+++|++++||||+++++++++
T Consensus 4 ~~d~y~~~~~iG--------~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 75 (322)
T d1s9ja_ 4 KDDDFEKISELG--------AGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 75 (322)
T ss_dssp CGGGEEEEEEEE--------CCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEEC
T ss_pred CccCCEEEEEEe--------cCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence 345799999999 99999999999999999999999986 3345678999999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
+ +.+||||||+. +|.+++.+. +.+++..++.++.||+.||.|||+.++|+||||||+||+++.+|.+||+||
T Consensus 76 ~--~~~~iVmEy~~gg~L~~~l~~~----~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DF 149 (322)
T d1s9ja_ 76 D--GEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDF 149 (322)
T ss_dssp S--SEEEEEEECCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCC
T ss_pred C--CEEEEEEEcCCCCcHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeC
Confidence 8 89999999998 799988532 579999999999999999999994469999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------- 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------- 273 (852)
|++..+.+.. .....||+.|+|||++.+..|+.++|||||||++|||++|..||.+.....
T Consensus 150 Gla~~~~~~~------~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~ 223 (322)
T d1s9ja_ 150 GVSGQLIDSM------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDA 223 (322)
T ss_dssp CCCHHHHHHT------C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC--------
T ss_pred CCccccCCCc------cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCc
Confidence 9998654321 124679999999999988889999999999999999999999995432100
Q ss_pred ------------------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCC
Q psy3914 274 ------------------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPG 311 (852)
Q Consensus 274 ------------------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~ 311 (852)
....++.++.+++++||..||.+|||+.++++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H----- 298 (322)
T d1s9ja_ 224 AETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH----- 298 (322)
T ss_dssp ----------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS-----
T ss_pred ccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC-----
Confidence 001246789999999999999999999999998
Q ss_pred CCCcc
Q psy3914 312 GYFKN 316 (852)
Q Consensus 312 ~fF~n 316 (852)
+||++
T Consensus 299 pf~~~ 303 (322)
T d1s9ja_ 299 AFIKR 303 (322)
T ss_dssp HHHHH
T ss_pred HhhCc
Confidence 88865
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-44 Score=389.06 Aligned_cols=239 Identities=15% Similarity=0.206 Sum_probs=208.2
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
.|++.+.|| +|+||+||+|+++.+|..||||+++. ....+.+.+|+++|++|+||||+++++++.++ +
T Consensus 13 ~Y~i~~~iG--------~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~ 82 (288)
T d2jfla1 13 FWEIIGELG--------DGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE--N 82 (288)
T ss_dssp TEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEET--T
T ss_pred CeEEeEEEe--------eCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC--C
Confidence 499999999 99999999999999999999999987 34456788999999999999999999999988 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
.+||||||+. +|.+++.+. ...+++..+..++.||+.||.||| +.||+||||||+||+++.+|.+||+|||++.
T Consensus 83 ~~~lvmEy~~~g~L~~~~~~~---~~~l~e~~~~~i~~qi~~gL~ylH-~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~ 158 (288)
T d2jfla1 83 NLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLH-DNKIIHRDLKAGNILFTLDGDIKLADFGVSA 158 (288)
T ss_dssp EEEEEEECCTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred eEEEEEecCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH-HCCEEEeecChhheeECCCCCEEEEechhhh
Confidence 9999999998 788887432 357999999999999999999999 8999999999999999999999999999986
Q ss_pred ccccccCCCCcccccccCCCcccCCccc-----cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc--------------
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENS-----LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-------------- 271 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~-----~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-------------- 271 (852)
..... ........||+.|+|||++ .+..|+.++|||||||++|||++|..||.+...
T Consensus 159 ~~~~~----~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~ 234 (288)
T d2jfla1 159 KNTRT----IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT 234 (288)
T ss_dssp ECHHH----HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCC
T ss_pred ccCCC----cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 44321 1122346789999999997 355678999999999999999999999965432
Q ss_pred ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 272 LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 272 l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
......+|+.+.++|++||+.||.+|||+.++++| +||+.
T Consensus 235 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h-----p~~~~ 274 (288)
T d2jfla1 235 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH-----PFVTV 274 (288)
T ss_dssp CSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS-----GGGCC
T ss_pred CCccccCCHHHHHHHHHHccCChhHCcCHHHHhcC-----cccCC
Confidence 22345789999999999999999999999999998 89964
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=7.7e-44 Score=386.94 Aligned_cols=237 Identities=16% Similarity=0.212 Sum_probs=194.7
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSK 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~ 131 (852)
.|++++.|| .|+||+||+|+++.+|+.||||++.+ ......+.+|+++|++|+||||++++++++++
T Consensus 10 ~Y~~~~~lG--------~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-- 79 (307)
T d1a06a_ 10 IYDFRDVLG--------TGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG-- 79 (307)
T ss_dssp TEEEEEESB--------SGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECS--
T ss_pred ceEEEEEEe--------eccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--
Confidence 499999999 99999999999999999999999987 23345678999999999999999999999988
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEc---cCCcEEEccc
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN---SCGEWKLGGL 206 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~---~~g~~KL~DF 206 (852)
+.+||||||+. +|.++|. ..+.+++..+..++.||+.||.||| +.+|+||||||+||++. .+|.+||+||
T Consensus 80 ~~~~lvmE~~~gg~L~~~l~----~~~~l~e~~~~~~~~qi~~al~ylH-~~~iiHrDiKp~Nil~~~~~~~~~vkl~DF 154 (307)
T d1a06a_ 80 GHLYLIMQLVSGGELFDRIV----EKGFYTERDASRLIFQVLDAVKYLH-DLGIVHRDLKPENLLYYSLDEDSKIMISDF 154 (307)
T ss_dssp SEEEEEECCCCSCBHHHHHH----TCSCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEESSSSTTCCEEECCC
T ss_pred CEEEEEEeccCCCcHHHhhh----cccCCCHHHHHHHHHHHHHHHHhhh-hceeeeEEecccceeecccCCCceEEEecc
Confidence 99999999998 7999884 2467999999999999999999999 89999999999999995 4789999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------------- 272 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------------- 272 (852)
|++...... .......||+.|+|||++.+..|+.++|||||||++|+|++|..||.+....
T Consensus 155 G~a~~~~~~-----~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~ 229 (307)
T d1a06a_ 155 GLSKMEDPG-----SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 229 (307)
T ss_dssp -----------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCC
T ss_pred ceeEEccCC-----CeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCC
Confidence 998754322 1223467999999999998888999999999999999999999999654211
Q ss_pred -cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 -SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 -~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....+|+.+.+++.+||..||.+|||+.++++| +||.+
T Consensus 230 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h-----p~~~~ 269 (307)
T d1a06a_ 230 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH-----PWIAG 269 (307)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS-----TTTTS
T ss_pred CccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC-----HhhCC
Confidence 1235789999999999999999999999999998 89964
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-43 Score=381.32 Aligned_cols=240 Identities=17% Similarity=0.215 Sum_probs=209.7
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--------CCchHHHHHHHHHHHhCCCCCcceEee
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--------ADTYEPALSYVKKLKTLRHPSILTFLD 124 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--------~~~~~~~~~E~~~Lk~LrHPnIlk~~d 124 (852)
+..|++++.|| .|+||+||+|+++.+|+.||||++++ ....+.+.+|+++|++|+||||+++++
T Consensus 9 ~d~Y~~~~~lG--------~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~ 80 (293)
T d1jksa_ 9 DDYYDTGEELG--------SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 80 (293)
T ss_dssp GGTEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccCEEEeEEEe--------cCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEE
Confidence 34699999999 99999999999999999999999976 123578999999999999999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC---
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG--- 199 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g--- 199 (852)
++++. +.+||||||+. +|.++|.+ .+.+++..++.++.||+.||.||| +.+|+||||||+||+++.+|
T Consensus 81 ~~~~~--~~~~iv~E~~~gg~L~~~i~~----~~~l~~~~~~~~~~qi~~al~yLH-~~~ivHrDiKp~Nill~~~~~~~ 153 (293)
T d1jksa_ 81 VYENK--TDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPK 153 (293)
T ss_dssp EEECS--SEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEESCSSSSS
T ss_pred EEEEC--CEEEEEEEcCCCccccchhcc----ccccchhHHHHHHHHHHHHHHhhh-hcceeecccccceEEEecCCCcc
Confidence 99988 99999999998 79998843 257999999999999999999999 99999999999999999877
Q ss_pred -cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-----
Q psy3914 200 -EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS----- 273 (852)
Q Consensus 200 -~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~----- 273 (852)
.+||+|||++...... .......||+.|+|||++.+..++.++|||||||++|||++|..||.+.....
T Consensus 154 ~~vkl~DfG~a~~~~~~-----~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i 228 (293)
T d1jksa_ 154 PRIKIIDFGLAHKIDFG-----NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 228 (293)
T ss_dssp CCEEECCCTTCEECTTS-----CBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred cceEecchhhhhhcCCC-----ccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 4999999998754322 12234568889999999988889999999999999999999999997543211
Q ss_pred ----------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 274 ----------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 274 ----------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
....+|+.+.++|++||+.||.+|||+.++++| +||+..
T Consensus 229 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h-----p~~~~~ 277 (293)
T d1jksa_ 229 SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH-----PWIKPK 277 (293)
T ss_dssp HTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS-----TTTCC-
T ss_pred HhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC-----cccCCC
Confidence 125788999999999999999999999999998 999753
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-43 Score=386.24 Aligned_cols=239 Identities=16% Similarity=0.254 Sum_probs=212.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++++.|| .|+||+||+|+++.+|+.||||++++ ......+.+|+++|++++||||++++++++++
T Consensus 6 dy~~~~~lG--------~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 77 (337)
T d1o6la_ 6 DFDYLKLLG--------KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH 77 (337)
T ss_dssp GEEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS
T ss_pred hcEEEEEEe--------cCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccc
Confidence 499999999 99999999999999999999999986 45667889999999999999999999999988
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
..+||||||+. +|..++.+ .+.+++..++.++.||+.||.||| +.||+||||||+||+++.+|.+||+|||
T Consensus 78 --~~~~iv~ey~~gg~L~~~~~~----~~~~~e~~~~~~~~qil~al~ylH-~~~iiHRDlKP~NILl~~~g~vkl~DFG 150 (337)
T d1o6la_ 78 --DRLCFVMEYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLH-SRDVVYRDIKLENLMLDKDGHIKITDFG 150 (337)
T ss_dssp --SEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred --cccccceeccCCCchhhhhhc----ccCCcHHHHHHHHHHHhhhhhhhh-hcCccccccCHHHeEecCCCCEEEeecc
Confidence 99999999998 79888843 367899999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcC
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNID 276 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~ 276 (852)
+++..... .......+||+.|+|||++.+..|+.++|||||||++|||++|.+||.+.+. ...+.
T Consensus 151 ~a~~~~~~----~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~ 226 (337)
T d1o6la_ 151 LCKEGISD----GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 226 (337)
T ss_dssp TCBCSCCT----TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT
T ss_pred cccccccC----CcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCCc
Confidence 98743221 1223356799999999999888999999999999999999999999976432 33457
Q ss_pred CCChhHHHHHHHhccCCCCCCCC-----HHHHHHhhcCCCCCCcch
Q psy3914 277 NIPENLKRVYLELISERPNQRPN-----PADFIMRNRKPGGYFKND 317 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rps-----~~elL~~l~~~~~fF~n~ 317 (852)
.+++.+.++|++||..||.+|++ +.++++| +||++.
T Consensus 227 ~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H-----p~f~~i 267 (337)
T d1o6la_ 227 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH-----RFFLSI 267 (337)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS-----GGGTTC
T ss_pred cCCHHHHHHHHhhccCCchhhcccccccHHHHHcC-----cccccC
Confidence 89999999999999999999995 8999997 899763
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-43 Score=376.15 Aligned_cols=235 Identities=19% Similarity=0.208 Sum_probs=200.1
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC--
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESP-- 129 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~-- 129 (852)
|++.++|| +|+||+||+|+++.++..||||++... ...+.+.+|+++|++++||||+++++++++.
T Consensus 11 ~~~~~~iG--------~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~ 82 (270)
T d1t4ha_ 11 LKFDIEIG--------RGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK 82 (270)
T ss_dssp EEEEEEEE--------ECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESS
T ss_pred EEeeeEEe--------cCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccc
Confidence 47888999 999999999999999999999998762 2345688999999999999999999998752
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC--ceecccCCCCEEEc-cCCcEEEc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDAD--LRHNHVNHTSIFIN-SCGEWKLG 204 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~--ivH~DIkp~NIlV~-~~g~~KL~ 204 (852)
....+||||||+. +|.+++.+ ...+++..+..++.||+.||.||| +.+ |+||||||+|||++ ++|.+||+
T Consensus 83 ~~~~~~ivmE~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~gl~yLH-~~~~~IiHrDiKp~NILl~~~~~~~Kl~ 157 (270)
T d1t4ha_ 83 GKKCIVLVTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLH-TRTPPIIHRDLKCDNIFITGPTGSVKIG 157 (270)
T ss_dssp SCEEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH-TSSSCCCCSCCCGGGEEESSTTSCEEEC
T ss_pred cCCEEEEEEeCCCCCcHHHHHhc----cccccHHHHHHHHHHHHHHHHHHH-HCCCCEEeCCcChhhceeeCCCCCEEEe
Confidence 2367899999998 79998853 257899999999999999999999 777 99999999999997 47999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------ 272 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------ 272 (852)
|||+++.... .......||+.|+|||++.+ .++.++|||||||++|||++|..||.+....
T Consensus 158 DFGla~~~~~------~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~ 230 (270)
T d1t4ha_ 158 DLGLATLKRA------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK 230 (270)
T ss_dssp CTTGGGGCCT------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC
T ss_pred ecCcceeccC------CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCC
Confidence 9999874321 12235679999999999865 4899999999999999999999999643221
Q ss_pred --cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 273 --SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 273 --~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
.....+++++.+++.+||..||++|||+.++++| +||+
T Consensus 231 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H-----p~fk 270 (270)
T d1t4ha_ 231 PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH-----AFFQ 270 (270)
T ss_dssp CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS-----GGGC
T ss_pred CcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCC-----cccC
Confidence 1124578899999999999999999999999998 8885
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9.7e-43 Score=379.72 Aligned_cols=238 Identities=16% Similarity=0.253 Sum_probs=211.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++++.|| .|+||+||+|+++.+|+.||||++++ ....+.+.+|+.+|+.++||||+++++++++.
T Consensus 5 dy~i~~~lG--------~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~ 76 (316)
T d1fota_ 5 DFQILRTLG--------TGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA 76 (316)
T ss_dssp GEEEEEEEE--------ECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS
T ss_pred HeEEEEEEe--------cCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeC
Confidence 499999999 99999999999999999999999976 45677899999999999999999999999988
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+.+|+||||+. +|..++. ....+++..++.++.||+.||.||| +.||+||||||+||+++.+|.+||+|||
T Consensus 77 --~~~~ivmE~~~gg~l~~~~~----~~~~~~~~~~~~~~~qi~~al~~lH-~~~iiHrDiKp~NILl~~~g~vkL~DFG 149 (316)
T d1fota_ 77 --QQIFMIMDYIEGGELFSLLR----KSQRFPNPVAKFYAAEVCLALEYLH-SKDIIYRDLKPENILLDKNGHIKITDFG 149 (316)
T ss_dssp --SEEEEEECCCCSCBHHHHHH----HTSSCCHHHHHHHHHHHHHHHHHHH-TTTEECCCCCGGGEEECTTSCEEECCCS
T ss_pred --CeeeeEeeecCCcccccccc----ccccccccHHHHHHHHHHHhhhhhc-cCcEEccccCchheeEcCCCCEEEecCc
Confidence 99999999998 6777663 3467889999999999999999999 9999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCcC
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNID 276 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~~ 276 (852)
+++...+. .....||+.|+|||++.+..|+.++|||||||++|+|++|..||.+.+. ...+.
T Consensus 150 ~a~~~~~~-------~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~ 222 (316)
T d1fota_ 150 FAKYVPDV-------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP 222 (316)
T ss_dssp SCEECSSC-------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCT
T ss_pred cceEeccc-------cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCC
Confidence 98754321 2246799999999999888899999999999999999999999965432 23356
Q ss_pred CCChhHHHHHHHhccCCCCCCC-----CHHHHHHhhcCCCCCCcchHH
Q psy3914 277 NIPENLKRVYLELISERPNQRP-----NPADFIMRNRKPGGYFKNDLI 319 (852)
Q Consensus 277 ~ip~~L~~li~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n~lv 319 (852)
.+|+++.+++.+||..||.+|+ +++++++| +||++.-.
T Consensus 223 ~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H-----p~f~~i~~ 265 (316)
T d1fota_ 223 FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH-----PWFKEVVW 265 (316)
T ss_dssp TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS-----GGGSSCCH
T ss_pred CCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC-----cccccCCH
Confidence 7899999999999999999996 89999998 99987533
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=3.3e-43 Score=388.66 Aligned_cols=238 Identities=16% Similarity=0.252 Sum_probs=208.5
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC--CchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA--DTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~--~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
+|++++.|| .|+||.||+|+++.+|+.||||++... ...+.+.+|+++|++|+||||++++++++++ +
T Consensus 27 ~Y~i~~~lG--------~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~ 96 (350)
T d1koaa2 27 HYDIHEELG--------TGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD--N 96 (350)
T ss_dssp TEEEEEEEE--------EETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEET--T
T ss_pred CeEEEEEEe--------cCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--C
Confidence 599999999 999999999999999999999999872 2346788999999999999999999999988 9
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc--CCcEEEcccch
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS--CGEWKLGGLEY 208 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~--~g~~KL~DFg~ 208 (852)
.+||||||+. +|.+++.+ ..+.+++..+..++.||+.||.||| +.|+|||||||+||+++. +|.+||+|||+
T Consensus 97 ~~~ivmE~~~gg~L~~~l~~---~~~~l~e~~~~~i~~qi~~aL~ylH-~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~ 172 (350)
T d1koaa2 97 EMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMH-ENNYVHLDLKPENIMFTTKRSNELKLIDFGL 172 (350)
T ss_dssp EEEEEECCCCSCBHHHHHTC---TTSCBCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEEEEcCCCCCHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHH-hcCCeeeeechhHeeeccCCCCeEEEeecch
Confidence 9999999998 79888832 2357999999999999999999999 899999999999999964 68899999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------------c
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------S 273 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------~ 273 (852)
++.+... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... .
T Consensus 173 a~~~~~~-----~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~ 247 (350)
T d1koaa2 173 TAHLDPK-----QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDS 247 (350)
T ss_dssp CEECCTT-----SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCG
T ss_pred heecccc-----cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcc
Confidence 8754321 2233567899999999998888999999999999999999999999654321 1
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.++|.+||..||++|||+.++++| +||..
T Consensus 248 ~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h-----p~~~~ 285 (350)
T d1koaa2 248 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEH-----PWLTP 285 (350)
T ss_dssp GGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS-----TTTSC
T ss_pred cccCCCHHHHHHHHHHccCChhHCcCHHHHhcC-----cccCC
Confidence 234689999999999999999999999999998 89864
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.2e-43 Score=383.60 Aligned_cols=233 Identities=16% Similarity=0.207 Sum_probs=201.3
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.|++.+.|| .|+||+||+|+++.+|+.||||+++.. ...+.+.+|+++|++|+||||+++++++.++
T Consensus 16 ~y~~l~~lG--------~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~ 87 (309)
T d1u5ra_ 16 LFSDLREIG--------HGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE 87 (309)
T ss_dssp HEEEEEEEE--------ECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred hcEeeEEEe--------cCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEEC
Confidence 499999999 999999999999999999999999872 2234688999999999999999999999988
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
+.+|||||||. +|..++ .....+++..+..++.||+.||.||| +.||+||||||+|||++.+|.+||+|||
T Consensus 88 --~~~~iv~E~~~~g~l~~~~----~~~~~l~e~~~~~i~~qi~~aL~yLH-~~~iiHrDiKp~NILl~~~~~~Kl~DFG 160 (309)
T d1u5ra_ 88 --HTAWLVMEYCLGSASDLLE----VHKKPLQEVEIAAVTHGALQGLAYLH-SHNMIHRDVKAGNILLSEPGLVKLGDFG 160 (309)
T ss_dssp --TEEEEEEECCSEEHHHHHH----HHTSCCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCSGGGEEEETTTEEEECCCT
T ss_pred --CEEEEEEEecCCCchHHHH----HhCCCCCHHHHHHHHHHHHHHHHHHH-hCCEeccCCCcceEEECCCCCEEEeecc
Confidence 89999999998 354443 23367999999999999999999999 8999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCcccc---CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc-----------
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSL---SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS----------- 273 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~----------- 273 (852)
++..... .....||+.|+|||++. ...|+.++|||||||++|||++|..||.+.....
T Consensus 161 ~a~~~~~--------~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~ 232 (309)
T d1u5ra_ 161 SASIMAP--------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP 232 (309)
T ss_dssp TCBSSSS--------BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC
T ss_pred cccccCC--------CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC
Confidence 9874322 12457999999999984 3458889999999999999999999996543211
Q ss_pred --CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 274 --NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 274 --~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
....+|+.+.+++.+||..||.+|||+.++++| +||.
T Consensus 233 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H-----p~~~ 271 (309)
T d1u5ra_ 233 ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH-----RFVL 271 (309)
T ss_dssp CCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC-----HHHH
T ss_pred CCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhC-----HHhc
Confidence 234678999999999999999999999999997 7774
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.7e-42 Score=383.05 Aligned_cols=237 Identities=18% Similarity=0.217 Sum_probs=211.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.+|++.+.|| .|+||+||+|+++.+|+.||||++++ ....+.+.+|+++|+.++||||+++++++.+
T Consensus 41 d~y~i~~~lG--------~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~ 112 (350)
T d1rdqe_ 41 DQFDRIKTLG--------TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112 (350)
T ss_dssp GGEEEEEEEE--------ECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred cCeEEEEEee--------cCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccc
Confidence 4699999999 99999999999999999999999976 4566788999999999999999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. ..+|+||||+. +|..++.+ .+.+++..++.++.||+.||.||| +.+||||||||+|||++.+|.+||+||
T Consensus 113 ~--~~~~~v~e~~~~g~l~~~l~~----~~~l~e~~~~~i~~qi~~aL~yLH-~~~iiHRDIKP~NILl~~~g~ikL~DF 185 (350)
T d1rdqe_ 113 N--SNLYMVMEYVAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDF 185 (350)
T ss_dssp S--SEEEEEEECCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEECCC
T ss_pred c--cccccccccccccchhhhHhh----cCCCCHHHHHHHHHHHHHHHHHHH-hCCEecCcCCHHHcccCCCCCEEeeec
Confidence 8 99999999998 68888743 257999999999999999999999 999999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNI 275 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~ 275 (852)
|+++.+... .....||+.|+|||++.+..++.++|||||||++|||++|..||.+... ...+
T Consensus 186 G~a~~~~~~-------~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p 258 (350)
T d1rdqe_ 186 GFAKRVKGR-------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258 (350)
T ss_dssp TTCEECSSC-------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred eeeeecccc-------cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCC
Confidence 999855321 1246789999999999888899999999999999999999999976432 2345
Q ss_pred CCCChhHHHHHHHhccCCCCCCC-----CHHHHHHhhcCCCCCCcch
Q psy3914 276 DNIPENLKRVYLELISERPNQRP-----NPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n~ 317 (852)
..+++.+.++|++||..||.+|+ ++.++++| +||++.
T Consensus 259 ~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H-----p~f~~~ 300 (350)
T d1rdqe_ 259 SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH-----KWFATT 300 (350)
T ss_dssp TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS-----GGGTTC
T ss_pred ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcC-----ccccCC
Confidence 68999999999999999999995 89999998 999765
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=5.9e-43 Score=386.93 Aligned_cols=239 Identities=15% Similarity=0.230 Sum_probs=208.7
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC--chHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD--TYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~--~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
.|++.+.|| .|+||+||+|+++.+|+.||||+++... ....+.+|+++|++|+||||++++++++++ .
T Consensus 30 ~Y~i~~~lG--------~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~--~ 99 (352)
T d1koba_ 30 YYDILEELG--------SGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK--Y 99 (352)
T ss_dssp TEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECS--S
T ss_pred ceEEEEEEe--------cCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--C
Confidence 499999999 9999999999999999999999998732 345678999999999999999999999988 9
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEc--cCCcEEEcccch
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFIN--SCGEWKLGGLEY 208 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~--~~g~~KL~DFg~ 208 (852)
.+|||||||. +|.+++. .....+++.+++.++.||+.||.||| +.||+||||||+|||++ .+|.+||+|||+
T Consensus 100 ~~~ivmE~~~gg~L~~~~~---~~~~~l~e~~~~~i~~qi~~aL~ylH-~~~iiHRDiKp~NILl~~~~~~~vkL~DFGl 175 (352)
T d1koba_ 100 EMVLILEFLSGGELFDRIA---AEDYKMSEAEVINYMRQACEGLKHMH-EHSIVHLDIKPENIMCETKKASSVKIIDFGL 175 (352)
T ss_dssp EEEEEEECCCCCBHHHHTT---CTTCCBCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEESSTTCCCEEECCCTT
T ss_pred EEEEEEEcCCCChHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecccccccccccccCCCeEEEeeccc
Confidence 9999999998 7887763 23357999999999999999999999 99999999999999998 578999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc---------------c
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------S 273 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------~ 273 (852)
+..+... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... .
T Consensus 176 a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~ 250 (352)
T d1koba_ 176 ATKLNPD-----EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDED 250 (352)
T ss_dssp CEECCTT-----SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSS
T ss_pred ceecCCC-----CceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcc
Confidence 9755321 2223457889999999998888999999999999999999999999764321 1
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
....+|+.+.++|.+||..||.+|||+.++++| +||+..
T Consensus 251 ~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H-----p~~~~~ 289 (352)
T d1koba_ 251 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH-----PWLKGD 289 (352)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS-----TTTSSC
T ss_pred cccCCCHHHHHHHHHHccCChhHCcCHHHHhcC-----HhhCCC
Confidence 235789999999999999999999999999998 899753
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-42 Score=372.16 Aligned_cols=240 Identities=18% Similarity=0.267 Sum_probs=204.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| +|+||+||+|+++.+|+.||||++.. +.....+.+|+++|++++||||+++++++++.
T Consensus 3 ~Y~~~~~lG--------~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~- 73 (298)
T d1gz8a_ 3 NFQKVEKIG--------EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE- 73 (298)
T ss_dssp TEEEEEEEE--------ECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET-
T ss_pred CCEeccEEe--------cCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccc-
Confidence 599999999 99999999999999999999999976 23467889999999999999999999999988
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+.+||||||+. .+..++.. .....+++..+..++.||+.||.||| +.|||||||||+||+++.++.+||+|||++
T Consensus 74 -~~~~iv~e~~~~~~~~~~~~--~~~~~l~e~~~~~~~~qil~~L~yLH-~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a 149 (298)
T d1gz8a_ 74 -NKLYLVFEFLHQDLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCH-SHRVLHRDLKPQNLLINTEGAIKLADFGLA 149 (298)
T ss_dssp -TEEEEEEECCSEEHHHHHHH--TTTTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTSCEEECSTTHH
T ss_pred -cceeEEEeecCCchhhhhhh--hcccCCCHHHHHHHHHHHHHHHHHhh-cCCEEccccCchheeecccCcceeccCCcc
Confidence 99999999998 66666632 23467999999999999999999999 899999999999999999999999999999
Q ss_pred hccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc---------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--------------- 273 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--------------- 273 (852)
+..... ........||+.|+|||++ ....++.++|||||||++|+|++|..||.+.+...
T Consensus 150 ~~~~~~----~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~ 225 (298)
T d1gz8a_ 150 RAFGVP----VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 225 (298)
T ss_dssp HHHCCC----SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred eeccCC----cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchh
Confidence 854322 2233345789999999997 44456789999999999999999999996432110
Q ss_pred -------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 -------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 -------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++++||..||.+|||+.++++| +||++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H-----~ff~~ 288 (298)
T d1gz8a_ 226 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH-----PFFQD 288 (298)
T ss_dssp TSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS-----GGGTT
T ss_pred hccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC-----Hhhcc
Confidence 013567889999999999999999999999998 88865
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=4.7e-42 Score=381.43 Aligned_cols=238 Identities=15% Similarity=0.215 Sum_probs=204.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHH---HHHHHhCCCCCcceEeee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSY---VKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E---~~~Lk~LrHPnIlk~~d~ 125 (852)
.+|++++.|| .|+||+||+|+++.+|+.||||++++ ......+.+| +++++.++||||++++++
T Consensus 4 ddy~i~~~lG--------~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~ 75 (364)
T d1omwa3 4 NDFSVHRIIG--------RGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA 75 (364)
T ss_dssp TTEEEEEEEE--------ECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEE
T ss_pred HhCeeeeEEe--------cCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEE
Confidence 3599999999 99999999999999999999999976 2233344444 677778889999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+++. +.+||||||+. +|.++|.+ ...+++..++.++.||+.||.||| +.|+|||||||+|||++.+|.+||
T Consensus 76 ~~~~--~~~~ivmE~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~ylH-~~~iiHrDlKP~NILl~~~g~iKl 148 (364)
T d1omwa3 76 FHTP--DKLSFILDLMNGGDLHYHLSQ----HGVFSEADMRFYAAEIILGLEHMH-NRFVVYRDLKPANILLDEHGHVRI 148 (364)
T ss_dssp EECS--SEEEEEECCCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECSSSCEEE
T ss_pred EEEC--CEEEEEEEecCCCcHHHHHHh----cccccHHHHHHHHHHHHHHHHHHH-HCCccceeeccceeEEcCCCcEEE
Confidence 9988 99999999998 79998853 267899999999999999999999 999999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS----------- 271 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~----------- 271 (852)
+|||+++.+... ......||+.|+|||++. +..|+.++|||||||++|||++|..||.+...
T Consensus 149 ~DFGla~~~~~~------~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~ 222 (364)
T d1omwa3 149 SDLGLACDFSKK------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 222 (364)
T ss_dssp CCCTTCEECSSS------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSS
T ss_pred eeeceeeecCCC------cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Confidence 999998754322 122457999999999984 56789999999999999999999999965322
Q ss_pred ---ccCcCCCChhHHHHHHHhccCCCCCCCC-----HHHHHHhhcCCCCCCcch
Q psy3914 272 ---LSNIDNIPENLKRVYLELISERPNQRPN-----PADFIMRNRKPGGYFKND 317 (852)
Q Consensus 272 ---l~~~~~ip~~L~~li~~lL~~nP~~Rps-----~~elL~~l~~~~~fF~n~ 317 (852)
......+|+.+.++|.+||..||.+||+ ++++++| +||++.
T Consensus 223 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H-----p~f~~i 271 (364)
T d1omwa3 223 TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES-----PFFRSL 271 (364)
T ss_dssp SCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS-----GGGTTC
T ss_pred cCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC-----ccccCC
Confidence 1224578999999999999999999999 6999997 999874
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-43 Score=376.79 Aligned_cols=236 Identities=17% Similarity=0.212 Sum_probs=197.6
Q ss_pred EeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-------CchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 58 VGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-------DTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 58 i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-------~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
..+.|| .|+||+||+|+++.+|+.||||+++.. .....+.+|+++|++++||||+++++++.++
T Consensus 2 ~l~~lG--------~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~- 72 (299)
T d1ua2a_ 2 KLDFLG--------EGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK- 72 (299)
T ss_dssp EEEEEE--------EETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT-
T ss_pred cceEec--------cCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccC-
Confidence 457888 999999999999999999999998761 1234688999999999999999999999988
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+++||||||+. .+...+ ......+++..+..+++||+.||+||| +.|++||||||+||+++.+|.+||+|||++
T Consensus 73 -~~~~ivmE~~~~~~~~~~---~~~~~~l~~~~~~~~~~qil~aL~~lH-~~~iiHrDiKp~NIli~~~~~~KL~DFG~a 147 (299)
T d1ua2a_ 73 -SNISLVFDFMETDLEVII---KDNSLVLTPSHIKAYMLMTLQGLEYLH-QHWILHRDLKPNNLLLDENGVLKLADFGLA 147 (299)
T ss_dssp -TCCEEEEECCSEEHHHHH---TTCCSSCCSSHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred -CceeehhhhhcchHHhhh---hhcccCCCHHHHHHHHHHHHHHHHHhh-ccceecccCCcceEEecCCCccccccCccc
Confidence 89999999998 444443 234467899999999999999999999 899999999999999999999999999999
Q ss_pred hccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc---------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--------------- 273 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--------------- 273 (852)
...... ........||+.|+|||++ ....++.++|||||||++|||++|.+||.+....+
T Consensus 148 ~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~ 223 (299)
T d1ua2a_ 148 KSFGSP----NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEE 223 (299)
T ss_dssp STTTSC----CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTT
T ss_pred cccCCC----cccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChh
Confidence 754332 1222345789999999998 45678999999999999999999999986532110
Q ss_pred ------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 ------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++++||..||++|||+.++|+| +||++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H-----p~f~~ 285 (299)
T d1ua2a_ 224 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM-----KYFSN 285 (299)
T ss_dssp TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS-----GGGTS
T ss_pred hccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC-----HhhCC
Confidence 013567899999999999999999999999998 89875
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-42 Score=368.68 Aligned_cols=240 Identities=18% Similarity=0.260 Sum_probs=204.8
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC--------CchHHHHHHHHHHHhCC--CCCcceE
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA--------DTYEPALSYVKKLKTLR--HPSILTF 122 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~--------~~~~~~~~E~~~Lk~Lr--HPnIlk~ 122 (852)
..+|++++.|| +|+||+||+|+++.+|+.||||++++. .....+.+|+.+|++++ ||||+++
T Consensus 3 ~~~Y~i~~~lG--------~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~ 74 (273)
T d1xwsa_ 3 ESQYQVGPLLG--------SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 74 (273)
T ss_dssp TTTEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCE
T ss_pred CCeEEEeEEEe--------eCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEE
Confidence 45799999999 999999999999999999999999761 11234678999999997 8999999
Q ss_pred eeeEEcCCCCeEEEEEeecc---cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc-C
Q psy3914 123 LDSVESPSKSLVYLAVEYVE---PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS-C 198 (852)
Q Consensus 123 ~d~~e~~~~~~~yIVtE~v~---~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~-~ 198 (852)
++++++. +.+|+||||+. .+..++.+ ...+++.+++.++.||+.||.||| +.||+||||||+||+++. .
T Consensus 75 ~~~~~~~--~~~~lv~e~~~~~~~l~~~~~~----~~~l~e~~~~~~~~qi~~al~~lH-~~~iiHrDiKp~NIll~~~~ 147 (273)
T d1xwsa_ 75 LDWFERP--DSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNR 147 (273)
T ss_dssp EEEEECS--SEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEETTT
T ss_pred EEEEeeC--CeEEEEEEeccCcchHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH-HCCCccccCcccceEEecCC
Confidence 9999988 99999999996 46666633 367999999999999999999999 899999999999999985 5
Q ss_pred CcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCC-CCCcchhHHhHHHHHHHHHhCCCCCCCCc-----cc
Q psy3914 199 GEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSH-VTKCSTDMYGLGILIWEVFNGPLQSTNRK-----SL 272 (852)
Q Consensus 199 g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~~~~sDIwSLG~ll~el~tG~~pf~~~~-----~l 272 (852)
+.+||+|||++..... .......||+.|+|||++.+. .++.++|||||||++|||++|..||.+.. ..
T Consensus 148 ~~vkl~DFG~a~~~~~------~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i~~~~~ 221 (273)
T d1xwsa_ 148 GELKLIDFGSGALLKD------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQV 221 (273)
T ss_dssp TEEEECCCTTCEECCS------SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCC
T ss_pred CeEEECccccceeccc------ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHHhhccc
Confidence 7999999999874322 122356799999999998544 45678999999999999999999996542 23
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcchH
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKNDL 318 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~l 318 (852)
.....+|+++.+++++||..||++|||+.++++| +||++.+
T Consensus 222 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h-----p~~~~~~ 262 (273)
T d1xwsa_ 222 FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH-----PWMQDVL 262 (273)
T ss_dssp CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS-----GGGSSCC
T ss_pred CCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcC-----HhhCCCC
Confidence 3457899999999999999999999999999998 8998753
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-42 Score=374.18 Aligned_cols=238 Identities=16% Similarity=0.243 Sum_probs=207.3
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-----CCchHHHHHHHHHHH-hCCCCCcceEeeeEEc
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-----ADTYEPALSYVKKLK-TLRHPSILTFLDSVES 128 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-----~~~~~~~~~E~~~Lk-~LrHPnIlk~~d~~e~ 128 (852)
+|++++.|| .|+||+||+|+++.+|+.||||++++ ....+.+.+|..++. .++||||+++++++++
T Consensus 3 dy~i~~~iG--------~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~ 74 (320)
T d1xjda_ 3 DFILHKMLG--------KGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT 74 (320)
T ss_dssp TEEEEEEEE--------ECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred CeEEeeEEe--------cCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEcc
Confidence 599999999 99999999999999999999999975 445566677777665 6899999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
+ +.+||||||+. +|.+++.. ...+++..+..++.||+.||.||| +.+++||||||+|||++.+|.+||+||
T Consensus 75 ~--~~~yivmEy~~~g~L~~~i~~----~~~~~e~~~~~~~~qi~~al~ylH-~~~iiHrDikp~NiL~~~~~~~kl~DF 147 (320)
T d1xjda_ 75 K--ENLFFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLH-SKGIVYRDLKLDNILLDKDGHIKIADF 147 (320)
T ss_dssp S--SEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTSCEEECCC
T ss_pred C--CceeEEEeecCCCcHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH-hCCeeeccCcccceeecCCCceecccc
Confidence 8 99999999998 79998843 367899999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc-----------ccCc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS-----------LSNI 275 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~-----------l~~~ 275 (852)
|+++.... .........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+. ...+
T Consensus 148 G~a~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p 223 (320)
T d1xjda_ 148 GMCKENML----GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP 223 (320)
T ss_dssp TTCBCCCC----TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred chhhhccc----ccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 99874322 12223346789999999999888899999999999999999999999976432 2234
Q ss_pred CCCChhHHHHHHHhccCCCCCCCCHH-HHHHhhcCCCCCCcc
Q psy3914 276 DNIPENLKRVYLELISERPNQRPNPA-DFIMRNRKPGGYFKN 316 (852)
Q Consensus 276 ~~ip~~L~~li~~lL~~nP~~Rps~~-elL~~l~~~~~fF~n 316 (852)
..+|+.+.++|++||..||.+||++. ++++| +||++
T Consensus 224 ~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~h-----pff~~ 260 (320)
T d1xjda_ 224 RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH-----PLFRE 260 (320)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS-----GGGTT
T ss_pred ccCCHHHHHHHHHhcccCCCCCcCHHHHHHhC-----chhcc
Confidence 67899999999999999999999995 78887 89976
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=8.2e-42 Score=365.56 Aligned_cols=238 Identities=15% Similarity=0.246 Sum_probs=206.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC-----------chHHHHHHHHHHHhCC-CCCcce
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD-----------TYEPALSYVKKLKTLR-HPSILT 121 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~-----------~~~~~~~E~~~Lk~Lr-HPnIlk 121 (852)
.+|++++.|| +|++|+||+|+++.+|+.||||++++.. ..+.+.+|+.+|++|+ ||||++
T Consensus 3 ~~y~~~~~iG--------~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~ 74 (277)
T d1phka_ 3 ENYEPKEILG--------RGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQ 74 (277)
T ss_dssp TTEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred ccCEEceEEe--------cCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Confidence 4699999999 9999999999999999999999998721 1235789999999997 999999
Q ss_pred EeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC
Q psy3914 122 FLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG 199 (852)
Q Consensus 122 ~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g 199 (852)
++++++++ +.+||||||+. +|.++|.. .+.+++..+..++.||+.||.||| ++||+||||||+||+++.+|
T Consensus 75 ~~~~~~~~--~~~~ivmE~~~~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH-~~~ivHrDlkp~Nill~~~~ 147 (277)
T d1phka_ 75 LKDTYETN--TFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALH-KLNIVHRDLKPENILLDDDM 147 (277)
T ss_dssp EEEEEECS--SEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTC
T ss_pred EEeecccC--cceEEEEEcCCCchHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-HcCCcccccccceEEEcCCC
Confidence 99999988 99999999998 89999843 367999999999999999999999 89999999999999999999
Q ss_pred cEEEcccchhhccccccCCCCcccccccCCCcccCCccc------cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-
Q psy3914 200 EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENS------LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL- 272 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~------~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l- 272 (852)
.+||+|||+++.+.... ......||+.|+|||.+ ....++.++|||||||++|+|++|..||.+....
T Consensus 148 ~~kl~DFG~a~~~~~~~-----~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~ 222 (277)
T d1phka_ 148 NIKLTDFGFSCQLDPGE-----KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 222 (277)
T ss_dssp CEEECCCTTCEECCTTC-----CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred CeEEccchheeEccCCC-----ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHH
Confidence 99999999998654321 12345789999999996 2445788999999999999999999999754321
Q ss_pred --------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 --------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 --------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....++|+.+++++.+||+.||.+|||+.++++| +||+.
T Consensus 223 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h-----~~~~~ 275 (277)
T d1phka_ 223 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH-----PFFQQ 275 (277)
T ss_dssp HHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS-----GGGCT
T ss_pred HHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC-----HHHHH
Confidence 1234789999999999999999999999999998 88863
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.8e-42 Score=369.23 Aligned_cols=239 Identities=13% Similarity=0.205 Sum_probs=204.4
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
..|++++.|| .|+||+||+|+++.+|+.||||+++. ....+.+.+|+++|++++||||+++++++.+. +
T Consensus 17 ~~~~~~~~iG--------~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~ 86 (287)
T d1opja_ 17 TDITMKHKLG--------GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--P 86 (287)
T ss_dssp GGEEEEEETT--------TTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS--S
T ss_pred HHeEEeeEEe--------eCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeC--C
Confidence 3599999999 99999999999999999999999977 44567899999999999999999999999987 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
.+||||||+. +|..+|.+. ....+++..+..++.||+.||.||| +.+|+||||||+|||++.+|.+||+|||+++
T Consensus 87 ~~~iv~E~~~~g~l~~~l~~~--~~~~~~~~~~~~i~~qi~~gL~yLH-~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~ 163 (287)
T d1opja_ 87 PFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE-KKNFIHRDLAARNCLVGENHLVKVADFGLSR 163 (287)
T ss_dssp SCEEEEECCTTCBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECGGGCEEECCCCCTT
T ss_pred eeEEEeecccCcchHHHhhhc--cccchHHHHHHHHHHHHHHHHHHHH-HCCcccCccccCeEEECCCCcEEEcccccee
Confidence 8999999998 788888432 3367899999999999999999999 8999999999999999999999999999998
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCC-CCc------------cccCcCC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQST-NRK------------SLSNIDN 277 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~-~~~------------~l~~~~~ 277 (852)
...... ........|++.|+|||++.+..++.++|||||||++|||++|..|+. +.. ....+..
T Consensus 164 ~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~ 240 (287)
T d1opja_ 164 LMTGDT---YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 240 (287)
T ss_dssp TCCSSS---SEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTT
T ss_pred ecCCCC---ceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCcc
Confidence 543321 112223457889999999977889999999999999999999766553 221 1233467
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
+|+.+.+++.+||+.||.+|||+.++++.++
T Consensus 241 ~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~ 271 (287)
T d1opja_ 241 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271 (287)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred chHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 8999999999999999999999999987653
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-42 Score=375.39 Aligned_cols=238 Identities=17% Similarity=0.223 Sum_probs=206.2
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC-chHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD-TYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~-~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
+|++++.|| .|+||+||+|+++.+|+.||||+++... ....+.+|+++|+.++||||++++++++++ +.
T Consensus 6 rY~i~~~lG--------~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~--~~ 75 (321)
T d1tkia_ 6 KYMIAEDLG--------RGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESM--EE 75 (321)
T ss_dssp TEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEET--TE
T ss_pred ceEEEEEEe--------cCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEEC--CE
Confidence 499999999 9999999999999999999999998733 345688999999999999999999999988 99
Q ss_pred EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccC--CcEEEcccchh
Q psy3914 134 VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSC--GEWKLGGLEYM 209 (852)
Q Consensus 134 ~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~--g~~KL~DFg~a 209 (852)
+|||||||. +|.++|.+ ....+++.+++.++.||+.||.||| +.||+||||||+||+++.+ +.+||+|||++
T Consensus 76 ~~lvmE~~~gg~L~~~i~~---~~~~l~e~~~~~i~~qi~~al~yLH-~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~ 151 (321)
T d1tkia_ 76 LVMIFEFISGLDIFERINT---SAFELNEREIVSYVHQVCEALQFLH-SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQA 151 (321)
T ss_dssp EEEEECCCCCCBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEESSSSCCCEEECCCTTC
T ss_pred EEEEEecCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH-HcCCCcccccccceeecCCCceEEEEcccchh
Confidence 999999998 79988842 2347999999999999999999999 8999999999999999864 47999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc---------------C
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS---------------N 274 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~---------------~ 274 (852)
+.... ........+|+.|+|||...+..++.++|||||||++|+|++|..||.+..... .
T Consensus 152 ~~~~~-----~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 226 (321)
T d1tkia_ 152 RQLKP-----GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEA 226 (321)
T ss_dssp EECCT-----TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHH
T ss_pred hcccc-----CCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhh
Confidence 75422 112234568889999999988889999999999999999999999996543211 1
Q ss_pred cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 275 IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 275 ~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
...+++.+.+++++||..||.+|||+.++++| +||+.
T Consensus 227 ~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h-----p~~~~ 263 (321)
T d1tkia_ 227 FKEISIEAMDFVDRLLVKERKSRMTASEALQH-----PWLKQ 263 (321)
T ss_dssp HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS-----HHHHS
T ss_pred ccCCCHHHHHHHHHHccCChhHCcCHHHHhcC-----Hhhcc
Confidence 24689999999999999999999999999998 77754
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-42 Score=365.73 Aligned_cols=235 Identities=19% Similarity=0.280 Sum_probs=194.1
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
...|++++.|| +|+||+||+|+.+ ..||||+++. ....+.+.+|+.+|++++||||+++++++..
T Consensus 7 ~~~~~~~~~lG--------~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~ 75 (276)
T d1uwha_ 7 DGQITVGQRIG--------SGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75 (276)
T ss_dssp TTCCCCCSEEE--------ECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred cccEEEEEEEe--------eCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec
Confidence 34599999999 9999999999753 3599999976 3455788999999999999999999998654
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
..+||||||+. +|.++|.. ....+++..+..++.||+.||.||| +.+||||||||+||+++.++.+||+||
T Consensus 76 ---~~~~lv~Ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~gl~yLH-~~~ivHrDlKp~NiLl~~~~~~Kl~DF 148 (276)
T d1uwha_ 76 ---PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLH-AKSIIHRDLKSNNIFLHEDLTVKIGDF 148 (276)
T ss_dssp ---SSCEEEEECCCEEEHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEEETTSSEEECCC
T ss_pred ---cEEEEEEecCCCCCHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHh-cCCEeccccCHHHEEEcCCCCEEEccc
Confidence 56899999998 79999842 2357999999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCcccc---CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-----------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSL---SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL----------- 272 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l----------- 272 (852)
|+++...... .........||+.|+|||++. ...++.++|||||||++|||++|..||.+....
T Consensus 149 Gla~~~~~~~--~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~ 226 (276)
T d1uwha_ 149 GLATVKSRWS--GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGY 226 (276)
T ss_dssp CCSCC--------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTS
T ss_pred cceeeccccC--CcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCC
Confidence 9987543211 112233567899999999984 345788999999999999999999999653221
Q ss_pred ------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 273 ------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 273 ------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.....+|+.+.+++.+||+.||.+|||+.++++++
T Consensus 227 ~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~L 267 (276)
T d1uwha_ 227 LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267 (276)
T ss_dssp CCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 12357899999999999999999999999999874
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-41 Score=358.61 Aligned_cols=236 Identities=15% Similarity=0.193 Sum_probs=193.8
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
.|++++.|| .|+||+||+|+.+ +++.||||+++. ....+.+.+|++++++++||||+++++++.++ +.
T Consensus 6 ~~~~~~~iG--------~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~--~~ 74 (263)
T d1sm2a_ 6 ELTFVQEIG--------SGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ--AP 74 (263)
T ss_dssp CEEEEEEEE--------CCSSCCEEEEEET-TTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS--SS
T ss_pred HcEEEEEEe--------eCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccC--Cc
Confidence 599999999 9999999999986 678899999987 44567789999999999999999999999987 88
Q ss_pred EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 134 VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 134 ~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
+||||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||+++.
T Consensus 75 ~~lv~E~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qia~gl~~lH-~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~ 150 (263)
T d1sm2a_ 75 ICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLE-EACVIHRDLAARNCLVGENQVIKVSDFGMTRF 150 (263)
T ss_dssp CEEEEECCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCTTCSGGGEEECGGGCEEECSCC----
T ss_pred eEEEEEecCCCcHHHHhhc---cccCCCHHHHHHHHHHHHHHHHhhh-ccceeecccchhheeecCCCCeEecccchhee
Confidence 999999998 79998843 2356889999999999999999999 89999999999999999999999999999875
Q ss_pred cccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhC-CCCCCCCcc------------ccCcCCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG-PLQSTNRKS------------LSNIDNI 278 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG-~~pf~~~~~------------l~~~~~i 278 (852)
...... .......||+.|+|||++.+..++.++|||||||++|||+++ .+||.+... ...+..+
T Consensus 151 ~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~ 227 (263)
T d1sm2a_ 151 VLDDQY---TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA 227 (263)
T ss_dssp -----------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTS
T ss_pred ccCCCc---eeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCcccc
Confidence 433211 112235688899999999888899999999999999999995 555643321 1234677
Q ss_pred ChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 279 PENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 279 p~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
|+.+.+++.+||..||.+|||+.+++++++
T Consensus 228 ~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 257 (263)
T d1sm2a_ 228 STHVYQIMNHCWKERPEDRPAFSRLLRQLA 257 (263)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CHHHHHHHHHHccCCHhHCcCHHHHHHHHH
Confidence 899999999999999999999999999853
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2e-41 Score=366.44 Aligned_cols=239 Identities=17% Similarity=0.235 Sum_probs=190.9
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCe---EEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE---KVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~---~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.|++++.|| .|+||+||+|+++.+|+ .|+||.+... ...+.+.+|+++|++|+||||+++++++.+
T Consensus 27 ~~~~~~~lG--------~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~ 98 (299)
T d1jpaa_ 27 CVKIEQVIG--------AGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTK 98 (299)
T ss_dssp GEEEEEEEE--------ECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred hcEEeeEEe--------eCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEee
Confidence 499999999 99999999999987764 5889988762 234568899999999999999999999988
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
. +.+||||||+. +|.+++.. ..+.+++.++..++.||+.||.||| +.+++||||||+|||++.+|.+||+||
T Consensus 99 ~--~~~~iv~Ey~~~g~L~~~~~~---~~~~l~~~~~~~i~~qia~gl~yLH-~~~iiHrDlKp~NILl~~~~~~Kl~DF 172 (299)
T d1jpaa_ 99 S--TPVMIITEFMENGSLDSFLRQ---NDGQFTVIQLVGMLRGIAAGMKYLA-DMNYVHRDLAARNILVNSNLVCKVSDF 172 (299)
T ss_dssp S--SSCEEEEECCTTEEHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTCCEEECCC
T ss_pred C--CEEEEEEEecCCCcceeeecc---ccCCCCHHHHHHHHHHHHHHHHHHh-hCCCccCccccceEEECCCCcEEECCc
Confidence 7 88999999998 69888743 2357899999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCC-CcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------c
Q psy3914 207 EYMEKISEASCIP-MKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------L 272 (852)
Q Consensus 207 g~a~~~~~~~~~~-~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l 272 (852)
|+++.+....... ........+|+.|+|||++.+..++.++|||||||++|||++ |..||.+... .
T Consensus 173 Gla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~ 252 (299)
T d1jpaa_ 173 GLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL 252 (299)
T ss_dssp -----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC
T ss_pred ccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Confidence 9998654322211 112223457889999999988889999999999999999998 8999965422 2
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.....+|+.+.+++.+||+.||.+|||+.++++.+
T Consensus 253 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L 287 (299)
T d1jpaa_ 253 PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 287 (299)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 33467899999999999999999999999999874
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-40 Score=352.46 Aligned_cols=237 Identities=13% Similarity=0.186 Sum_probs=204.4
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
..|+++++|| +|+||+||+|+.+ ++..||||+++. ....+.+.+|++++++++||||+++++++.++ +
T Consensus 4 ~~~~~~~~iG--------~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~--~ 72 (258)
T d1k2pa_ 4 KDLTFLKELG--------TGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ--R 72 (258)
T ss_dssp CCCCCCCCCC--------EETTEEEEEEEET-TTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCS--S
T ss_pred HHCEEeEEEe--------cCCCeEEEEEEEC-CCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeC--C
Confidence 3588999999 9999999999985 788999999987 44667899999999999999999999999987 8
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
.+|+||||+. +|..++.. ....+++..+..++.||++||.||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 73 ~~~iv~Ey~~~g~l~~~~~~---~~~~~~~~~~~~i~~qi~~gl~~LH-~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~ 148 (258)
T d1k2pa_ 73 PIFIITEYMANGCLLNYLRE---MRHRFQTQQLLEMCKDVCEAMEYLE-SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 148 (258)
T ss_dssp SEEEEEECCTTEEHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHH-HTTBCCSCCSGGGEEECTTCCEEECCCSSCC
T ss_pred ceEEEEEccCCCcHHHhhhc---cccCCcHHHHHHHHHHHHHHHHHHh-hcCcccccccceeEEEcCCCcEEECcchhhe
Confidence 8999999998 68887642 2357889999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCc------------cccCcCC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRK------------SLSNIDN 277 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~------------~l~~~~~ 277 (852)
.+.... ........+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.. ....+..
T Consensus 149 ~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~ 225 (258)
T d1k2pa_ 149 YVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL 225 (258)
T ss_dssp BCSSSS---CCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTT
T ss_pred eccCCC---ceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCCccc
Confidence 543321 112223568889999999987889999999999999999998 799996532 2234567
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
+|+.+.+++.+||+.||.+|||+.++++|+.
T Consensus 226 ~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 256 (258)
T d1k2pa_ 226 ASEKVYTIMYSCWHEKADERPTFKILLSNIL 256 (258)
T ss_dssp CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHccCCHhHCcCHHHHHHHhh
Confidence 8899999999999999999999999999863
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-41 Score=368.16 Aligned_cols=240 Identities=16% Similarity=0.218 Sum_probs=201.1
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCe-----EEEEEEEeC---CCchHHHHHHHHHHHhC-CCCCcceEeee
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE-----KVTIFLNDS---ADTYEPALSYVKKLKTL-RHPSILTFLDS 125 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~-----~VaVKv~~~---~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~ 125 (852)
.|++++.|| .|+||+||+|+.+.+++ .|+||++.. ......+.+|+.+|+++ +||||++++++
T Consensus 38 ~~~l~~~lG--------~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~ 109 (325)
T d1rjba_ 38 NLEFGKVLG--------SGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGA 109 (325)
T ss_dssp GEEEEEEEE--------ECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred HeEEeeEEe--------eCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEE
Confidence 599999999 99999999999876553 799999865 34456788999999998 89999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhh-------------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCce
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLK-------------------ENNEKKQIYISWGIFQITRALSFLINDADLR 184 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~-------------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~iv 184 (852)
+.+. +.+||||||+. +|.++|..... ....+++..+..++.||+.||.||| +.+||
T Consensus 110 ~~~~--~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH-~~~Ii 186 (325)
T d1rjba_ 110 CTLS--GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE-FKSCV 186 (325)
T ss_dssp ECSS--SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH-HTTEE
T ss_pred EeeC--CeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHH-hCCee
Confidence 9988 89999999998 79999954321 1235889999999999999999999 89999
Q ss_pred ecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CC
Q psy3914 185 HNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GP 263 (852)
Q Consensus 185 H~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~ 263 (852)
||||||+||+++.+|.+||+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||++ |.
T Consensus 187 HRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~--~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~ 264 (325)
T d1rjba_ 187 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSN--YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV 264 (325)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT--SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred eccCchhccccccCCeEEEeeccccccccCCCc--eeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCC
Confidence 999999999999999999999999975433211 122234567899999999988889999999999999999997 89
Q ss_pred CCCCCCcc-------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 264 LQSTNRKS-------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 264 ~pf~~~~~-------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.||.+... +..+..+|+.+.+++.+||+.||++|||+.+++++|
T Consensus 265 ~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L 321 (325)
T d1rjba_ 265 NPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321 (325)
T ss_dssp CSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 99965422 233567899999999999999999999999999985
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=6.5e-41 Score=359.47 Aligned_cols=237 Identities=17% Similarity=0.232 Sum_probs=199.9
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.++|| +|+||+||+|+++ +|+.||||++.. +.....+.+|+++|++++||||+++++++.++
T Consensus 3 ~Y~~~~~iG--------~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~- 72 (286)
T d1ob3a_ 3 KYHGLEKIG--------EGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK- 72 (286)
T ss_dssp SEEEEEEEE--------EETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS-
T ss_pred CceeccEEe--------cCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccC-
Confidence 699999999 9999999999986 789999999976 33457899999999999999999999999988
Q ss_pred CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchh
Q psy3914 131 KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYM 209 (852)
Q Consensus 131 ~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a 209 (852)
+..|++||++. .+...+. ...+.+++..+..++.||+.||.||| +.+||||||||+||+++.+|.+||+|||++
T Consensus 73 -~~~~i~~e~~~~~~~~~~~---~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~IvHrDiKp~NIll~~~~~~kl~DfG~a 147 (286)
T d1ob3a_ 73 -KRLVLVFEHLDQDLKKLLD---VCEGGLESVTAKSFLLQLLNGIAYCH-DRRVLHRDLKPQNLLINREGELKIADFGLA 147 (286)
T ss_dssp -SCEEEEEECCSEEHHHHHH---TSTTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTSCEEECCTTHH
T ss_pred -CceeEEEEeehhhhHHHHH---hhcCCcchhhhHHHHHHHHHHHHHhc-cCcEEecCCCCceeeEcCCCCEEecccccc
Confidence 89999999999 5544442 33478999999999999999999999 899999999999999999999999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------- 272 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------- 272 (852)
...... ........+++.|+|||.+ ....++.++|||||||++|||++|..||.+....
T Consensus 148 ~~~~~~----~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~ 223 (286)
T d1ob3a_ 148 RAFGIP----VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSK 223 (286)
T ss_dssp HHHCC-------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred eecccC----ccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChh
Confidence 854322 1222344678899999998 4556789999999999999999999999543210
Q ss_pred ------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 273 ------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 273 ------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
..+..+++.+.+++++||..||++|||+.++++| +||+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H-----p~f~ 285 (286)
T d1ob3a_ 224 NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH-----AYFK 285 (286)
T ss_dssp TSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS-----GGGG
T ss_pred hccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC-----cccC
Confidence 1124567889999999999999999999999998 8986
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.2e-40 Score=356.12 Aligned_cols=239 Identities=19% Similarity=0.280 Sum_probs=195.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-----CchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-----DTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
.+|++.+.|| .|+||+||+|+++.+|+.||||++... .....+.+|+++|+.++||||++++++++.
T Consensus 7 drY~i~~~lG--------~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~ 78 (277)
T d1o6ya_ 7 DRYELGEILG--------FGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA 78 (277)
T ss_dssp TTEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred ceeEEeEEEe--------eCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeee
Confidence 4699999999 999999999999999999999999762 223468899999999999999999999886
Q ss_pred CC--CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 129 PS--KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 129 ~~--~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
+. ...+||||||+. +|..++.. .+.+++.++..++.||+.||.||| +.||+||||||+||+++.++..+|+
T Consensus 79 ~~~~~~~~~lvmE~~~g~~L~~~~~~----~~~l~~~~~~~i~~qi~~al~~lH-~~~iiHrDiKP~NIll~~~~~~~l~ 153 (277)
T d1o6ya_ 79 ETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMISATNAVKVM 153 (277)
T ss_dssp ECSSSEEEEEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEEETTSCEEEC
T ss_pred ccCCCceEEEEEECCCCCEehhhhcc----cCCCCHHHHHHHHHHHHHHHHHHH-hCCccCccccCcccccCccccceee
Confidence 52 135899999998 68887743 267999999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc------------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------ 272 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------ 272 (852)
|||++....... ..........||+.|+|||++.+..++.++|||||||++|+|++|.+||.+....
T Consensus 154 d~~~~~~~~~~~-~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~ 232 (277)
T d1o6ya_ 154 DFGIARAIADSG-NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI 232 (277)
T ss_dssp CCTTCEECC-----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC
T ss_pred hhhhhhhhcccc-ccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCC
Confidence 999976432211 1122233567899999999998888999999999999999999999999754321
Q ss_pred ---cCcCCCChhHHHHHHHhccCCCCCCC-CHHHHHHh
Q psy3914 273 ---SNIDNIPENLKRVYLELISERPNQRP-NPADFIMR 306 (852)
Q Consensus 273 ---~~~~~ip~~L~~li~~lL~~nP~~Rp-s~~elL~~ 306 (852)
.....+|+.+.++|.+||..||.+|| ++++++..
T Consensus 233 ~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~ 270 (277)
T d1o6ya_ 233 PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 270 (277)
T ss_dssp CGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHH
T ss_pred CCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHH
Confidence 12357899999999999999999999 77877664
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-41 Score=359.29 Aligned_cols=236 Identities=17% Similarity=0.193 Sum_probs=198.5
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
..|++++.|| .|+||+||+|+.+ ++..||||+++. ....+.+.+|+++|++++||||+++++++.+ +
T Consensus 13 ~~~~~~~~iG--------~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~---~ 80 (272)
T d1qpca_ 13 ETLKLVERLG--------AGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ---E 80 (272)
T ss_dssp GGEEEEEEEE--------EETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS---S
T ss_pred HHeEEeEEEe--------cCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeecc---C
Confidence 3599999999 9999999999986 678999999987 4456779999999999999999999998754 4
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
.+||||||+. +|.+++... ....+++..+..++.||+.||.||| +.+|+||||||+||+|+.++.+||+|||+++
T Consensus 81 ~~~iv~Ey~~~g~L~~~~~~~--~~~~l~~~~~~~i~~qi~~gl~~lH-~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~ 157 (272)
T d1qpca_ 81 PIYIITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIE-ERNYIHRDLRAANILVSDTLSCKIADFGLAR 157 (272)
T ss_dssp SCEEEEECCTTCBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CeEEEEEeCCCCcHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCccchhheeeecccceeeccccceE
Confidence 6799999998 788877432 2245899999999999999999999 8999999999999999999999999999998
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCC-CCCCCc------------cccCcCC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPL-QSTNRK------------SLSNIDN 277 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~-pf~~~~------------~l~~~~~ 277 (852)
...+.. ........||+.|+|||++.+..++.++|||||||++|||++|.. |+.+.. ....+..
T Consensus 158 ~~~~~~---~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~ 234 (272)
T d1qpca_ 158 LIEDNE---YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234 (272)
T ss_dssp ECSSSC---EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTT
T ss_pred EccCCc---cccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCccc
Confidence 553321 112224568889999999977778999999999999999999654 443221 1223567
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+|+.+.+++.+||+.||++|||+.++++.+
T Consensus 235 ~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L 264 (272)
T d1qpca_ 235 CPEELYQLMRLCWKERPEDRPTFDYLRSVL 264 (272)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHhHCcCHHHHHHHh
Confidence 899999999999999999999999998865
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-41 Score=370.07 Aligned_cols=237 Identities=17% Similarity=0.212 Sum_probs=199.4
Q ss_pred CeeEec-cccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHh-CCCCCcceEeeeEEcC--C
Q psy3914 55 AYEVGE-PAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKT-LRHPSILTFLDSVESP--S 130 (852)
Q Consensus 55 ~Y~i~e-~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~-LrHPnIlk~~d~~e~~--~ 130 (852)
.|+|.. .|| .|+||+||+|+++.+|+.||||+++. ...+.+|+.++.+ ++||||+++++++++. .
T Consensus 12 ~y~i~~~~lG--------~G~fg~Vy~a~~~~~~~~vAiK~i~~---~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~ 80 (335)
T d2ozaa1 12 DYKVTSQVLG--------LGINGKVLQIFNKRTQEKFALKMLQD---CPKARREVELHWRASQCPHIVRIVDVYENLYAG 80 (335)
T ss_dssp TEEEEEEEEE--------ECSSCEEEEEEETTTCCEEEEEEEEC---SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred CEEEeeEEee--------eccCeEEEEEEECCCCCEEEEEEECC---cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccC
Confidence 598864 599 99999999999999999999999975 3567899998655 5899999999999751 2
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc---CCcEEEcc
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS---CGEWKLGG 205 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~---~g~~KL~D 205 (852)
..++|||||||. +|.++|.+. ....+++.+++.++.||+.||.||| +.||+||||||+||+++. .+.+||+|
T Consensus 81 ~~~~~ivmEy~~gg~L~~~i~~~--~~~~l~e~~~~~i~~qi~~al~ylH-~~~iiHRDiKp~NIll~~~~~~~~~Kl~D 157 (335)
T d2ozaa1 81 RKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTD 157 (335)
T ss_dssp EEEEEEEEECCCSEEHHHHHHSC--SCCCEEHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEESCSSTTCCEEECC
T ss_pred CCEEEEEEECCCCCcHHHHHHhc--CCCCcCHHHHHHHHHHHHHHHHHHH-HcCCccccccccccccccccccccccccc
Confidence 367999999997 799999532 2346999999999999999999999 999999999999999986 56799999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC-----------
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN----------- 274 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~----------- 274 (852)
||+++..... .......||+.|+|||++.+..|+.++|||||||++|+|++|..||.+......
T Consensus 158 FG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~ 232 (335)
T d2ozaa1 158 FGFAKETTSH-----NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 232 (335)
T ss_dssp CTTCEECCCC-----CCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSC
T ss_pred cceeeeccCC-----CccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcC
Confidence 9998754332 122346789999999999888899999999999999999999999965432110
Q ss_pred --------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 275 --------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 275 --------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
...+++.+.++|++||..||.+|||+.++++| +||.
T Consensus 233 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h-----p~~~ 276 (335)
T d2ozaa1 233 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH-----PWIM 276 (335)
T ss_dssp SSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS-----HHHH
T ss_pred CCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC-----HHhh
Confidence 12478889999999999999999999999997 6764
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.7e-41 Score=358.64 Aligned_cols=238 Identities=13% Similarity=0.167 Sum_probs=198.6
Q ss_pred CCeeEec-cccCCCCCCcccCCceEEEEEEEcCC--CeEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeEE
Q psy3914 54 FAYEVGE-PAVSFSGCFTQKHTFWKFHGGKKKGS--NEKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSVE 127 (852)
Q Consensus 54 ~~Y~i~e-~Ig~~~g~~~~~Gs~~~Vy~a~~k~~--g~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e 127 (852)
..|.+.+ +|| .|+||+||+|+.+.+ +..||||+++.. ...+.+.+|+++|++++||||++++++++
T Consensus 8 ~~~~~~~~~iG--------~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~ 79 (285)
T d1u59a_ 8 DNLLIADIELG--------CGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ 79 (285)
T ss_dssp GGEEEEEEEEE--------CCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred cCeEECCcEEe--------cccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeec
Confidence 3578888 499 999999999987644 568999999862 23457889999999999999999999997
Q ss_pred cCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcc
Q psy3914 128 SPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGG 205 (852)
Q Consensus 128 ~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~D 205 (852)
++ .+||||||+. +|.+++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|
T Consensus 80 ~~---~~~lvmE~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~ylH-~~~iiHrDlKp~Nill~~~~~~Kl~D 152 (285)
T d1u59a_ 80 AE---ALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLE-EKNFVHRDLAARNVLLVNRHYAKISD 152 (285)
T ss_dssp SS---SEEEEEECCTTEEHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEEEETTEEEECC
T ss_pred cC---eEEEEEEeCCCCcHHHHhhc---cccCCCHHHHHHHHHHHHHHHHHHH-hCCeecCcCchhheeeccCCceeecc
Confidence 64 5899999998 79888732 2357899999999999999999999 89999999999999999999999999
Q ss_pred cchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------c
Q psy3914 206 LEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------L 272 (852)
Q Consensus 206 Fg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l 272 (852)
||+++.+..... .........||+.|+|||++....++.++|||||||++|||++ |..||.+... .
T Consensus 153 FGla~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~ 231 (285)
T d1u59a_ 153 FGLSKALGADDS-YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM 231 (285)
T ss_dssp CTTCEECTTCSC-EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC
T ss_pred chhhhccccccc-ccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Confidence 999986543211 1122224567889999999977788999999999999999998 8999965422 2
Q ss_pred cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 273 SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 273 ~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
..+..+|+.+.+++.+||+.||++|||+.++++.+
T Consensus 232 ~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L 266 (285)
T d1u59a_ 232 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM 266 (285)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 34578899999999999999999999999998764
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-40 Score=367.71 Aligned_cols=244 Identities=16% Similarity=0.232 Sum_probs=201.0
Q ss_pred ccccccccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCC
Q psy3914 40 PKMWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLR 115 (852)
Q Consensus 40 ~~m~~~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~Lr 115 (852)
.++|.+-. +|++.+.|| .|+||+||+|+++.+|+.||||+++.. ...+.+.+|+++|+.++
T Consensus 11 ~~~~~~~~-------~Y~~i~~lG--------~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~ 75 (346)
T d1cm8a_ 11 KTAWEVRA-------VYRDLQPVG--------SGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR 75 (346)
T ss_dssp SSEECCBS-------SEEEEEEC--------------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC
T ss_pred CceeecCC-------cEEEEEEEe--------cCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcC
Confidence 34566533 599999999 999999999999999999999999862 23457889999999999
Q ss_pred CCCcceEeeeEEcCC----CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCC
Q psy3914 116 HPSILTFLDSVESPS----KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNH 190 (852)
Q Consensus 116 HPnIlk~~d~~e~~~----~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp 190 (852)
||||+++++++.... ...+||||||+. .|..++.. ..+++..++.++.||+.||.||| +.||+||||||
T Consensus 76 hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH-~~~IiHrDiKp 149 (346)
T d1cm8a_ 76 HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIH-AAGIIHRDLKP 149 (346)
T ss_dssp BTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCG
T ss_pred CCCeeEEEEEeccCccccccceEEEEEecccccHHHHHHh-----ccccHHHHHHHHHHHHHHHHHHH-hCCCcccccCc
Confidence 999999999998651 135899999999 57666632 57999999999999999999999 99999999999
Q ss_pred CCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCC
Q psy3914 191 TSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNR 269 (852)
Q Consensus 191 ~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~ 269 (852)
+||+++.+|.+||+|||++...... .....||+.|+|||++. ...++.++|||||||++|+|++|.+||.+.
T Consensus 150 ~NIL~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~ 222 (346)
T d1cm8a_ 150 GNLAVNEDCELKILDFGLARQADSE-------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 222 (346)
T ss_dssp GGEEECTTCCEEECCCTTCEECCSS-------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred chhhcccccccccccccceeccCCc-------cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCC
Confidence 9999999999999999999754321 23457889999999984 456789999999999999999999999654
Q ss_pred ccc------------------------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 270 KSL------------------------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 270 ~~l------------------------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
... ..+..+++.+.++|++||..||.+|||+.++|+|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H- 301 (346)
T d1cm8a_ 223 DHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH- 301 (346)
T ss_dssp SHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS-
T ss_pred ChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC-
Confidence 211 1124678899999999999999999999999998
Q ss_pred cCCCCCCcc
Q psy3914 308 RKPGGYFKN 316 (852)
Q Consensus 308 ~~~~~fF~n 316 (852)
+||++
T Consensus 302 ----p~f~~ 306 (346)
T d1cm8a_ 302 ----PYFES 306 (346)
T ss_dssp ----GGGTT
T ss_pred ----hhhCc
Confidence 89875
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-40 Score=359.35 Aligned_cols=244 Identities=19% Similarity=0.235 Sum_probs=199.5
Q ss_pred CCCCeeEeccccCCCCCCcccCCceEEEEEEEcCC-CeEEEEEEEeC----CCchHHHHHHHHHHHhC---CCCCcceEe
Q psy3914 52 KDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS-NEKVTIFLNDS----ADTYEPALSYVKKLKTL---RHPSILTFL 123 (852)
Q Consensus 52 ~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~-g~~VaVKv~~~----~~~~~~~~~E~~~Lk~L---rHPnIlk~~ 123 (852)
.+.+|++.+.|| .|+||+||+|+++.+ ++.||||++.. ......+.+|+.+|+.| +||||++++
T Consensus 5 ~~~~Y~i~~~LG--------~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~ 76 (305)
T d1blxa_ 5 ADQQYECVAEIG--------EGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLF 76 (305)
T ss_dssp GGGTEEEEEEEE--------EETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEE
T ss_pred CcCCEEEEEEEe--------cccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceee
Confidence 345799999999 999999999999655 67899999875 22333456777766655 899999999
Q ss_pred eeEEcC---CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC
Q psy3914 124 DSVESP---SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG 199 (852)
Q Consensus 124 d~~e~~---~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g 199 (852)
+++... ....+|++|||+. .+..++.. .....+++..++.++.||+.||.||| +.+|+||||||+|||++..|
T Consensus 77 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~--~~~~~~~~~~~~~~~~qi~~aL~yLH-~~~ivHrDiKp~NILi~~~~ 153 (305)
T d1blxa_ 77 DVCTVSRTDRETKLTLVFEHVDQDLTTYLDK--VPEPGVPTETIKDMMFQLLRGLDFLH-SHRVVHRDLKPQNILVTSSG 153 (305)
T ss_dssp EEEEEEECSSEEEEEEEEECCSCBHHHHHHH--SCTTCSCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTC
T ss_pred eeecccccccCceEEEEEEeccCCchhhhhh--ccCCCCCHHHHHHHHHHHHHHHHHHH-hCCEEecCCCccEEEEcCCC
Confidence 998632 2257999999998 44444322 33467899999999999999999999 89999999999999999999
Q ss_pred cEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-------
Q psy3914 200 EWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------- 272 (852)
Q Consensus 200 ~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------- 272 (852)
.+||+|||++..... ........||+.|+|||++.+..|+.++|||||||++|||++|.+||.+....
T Consensus 154 ~~kl~dfg~~~~~~~-----~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~ 228 (305)
T d1blxa_ 154 QIKLADFGLARIYSF-----QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 228 (305)
T ss_dssp CEEECSCCSCCCCCG-----GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred Ceeecchhhhhhhcc-----cccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 999999999864322 12233567899999999998889999999999999999999999999654211
Q ss_pred -------------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 273 -------------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 -------------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
.....+++.+.+++.+||..||.+|||+.++++| +||++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H-----pff~~ 298 (305)
T d1blxa_ 229 DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH-----PYFQD 298 (305)
T ss_dssp HHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS-----GGGTT
T ss_pred HhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC-----hhhcC
Confidence 0124578899999999999999999999999998 89865
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-40 Score=362.26 Aligned_cols=247 Identities=17% Similarity=0.203 Sum_probs=200.2
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.++|| +|+||+||+|+++.+|+.||||++.. +.....+.+|+++|++++||||+++++++...
T Consensus 10 ~rY~i~~~LG--------~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~ 81 (318)
T d3blha1 10 SKYEKLAKIG--------QGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK 81 (318)
T ss_dssp GGEEEEEEEE--------ECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred CCEEEEEEEe--------cCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecc
Confidence 4699999999 99999999999999999999999866 34556788999999999999999999998653
Q ss_pred ------CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 130 ------SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 130 ------~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
...++|+||||+. .+...+. .....+++..++.++.||+.||.||| +.||+||||||+||+++.+|.+|
T Consensus 82 ~~~~~~~~~~~~iv~e~~~~~~~~~~~---~~~~~~~~~~~~~i~~qil~~l~~lH-~~~ivHrDlKp~NILl~~~~~~k 157 (318)
T d3blha1 82 ASPYNRCKGSIYLVFDFCEHDLAGLLS---NVLVKFTLSEIKRVMQMLLNGLYYIH-RNKILHRDMKAANVLITRDGVLK 157 (318)
T ss_dssp ---------CEEEEEECCCEEHHHHHT---CTTCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTSCEE
T ss_pred cccccccCceEEEEEeccCCCccchhh---hcccccccHHHHHHHHHHHHHHHHhc-cCCEEecCcCchheeecCCCcEE
Confidence 1256899999998 5554442 33467899999999999999999999 89999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC-------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN------- 274 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~------- 274 (852)
|+|||++..+...............||+.|+|||++. ...++.++|||||||++|||++|..||.+......
T Consensus 158 l~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~ 237 (318)
T d3blha1 158 LADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 237 (318)
T ss_dssp ECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred eeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHh
Confidence 9999999765443333333344567999999999984 45688999999999999999999999964321110
Q ss_pred -----------------------cC-------------CCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 275 -----------------------ID-------------NIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 275 -----------------------~~-------------~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.. ..++.+.+++.+||..||++|||+.++++| +||.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H-----pff~~~ 311 (318)
T d3blha1 238 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH-----DFFWSD 311 (318)
T ss_dssp HCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS-----GGGSSS
T ss_pred cCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC-----hhhccC
Confidence 00 124567889999999999999999999998 999753
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-40 Score=351.96 Aligned_cols=239 Identities=15% Similarity=0.170 Sum_probs=191.4
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCC----eEEEEEEEeCC---CchHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN----EKVTIFLNDSA---DTYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g----~~VaVKv~~~~---~~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
..|++++.|| .|+||+||+|..+.++ ..||||+++.. .....+.+|+++|++++||||+++++++
T Consensus 7 ~~~~~~~~iG--------~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~ 78 (283)
T d1mqba_ 7 SCVTRQKVIG--------AGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI 78 (283)
T ss_dssp TTEEEEEEEE--------ECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred HHeEeeeEEe--------eCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEE
Confidence 3599999999 9999999999987665 47999999762 2234678999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
.+. ..+|+||||+. .|.+++.. ....+++..+..++.||+.||.||| +.+|+||||||+||||+.+|.+||+
T Consensus 79 ~~~--~~~~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~~i~~gl~~lH-~~~iiHrDlKp~NILl~~~~~~Kl~ 152 (283)
T d1mqba_ 79 SKY--KPMMIITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLA-NMNYVHRDLAARNILVNSNLVCKVS 152 (283)
T ss_dssp CSS--SSEEEEEECCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred ecC--CceEEEEEecccCcchhhhhc---ccccccHHHHHHHHHHHHHhhhhcc-ccccccCccccceEEECCCCeEEEc
Confidence 987 88999999998 57766632 3367899999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCC-CCCc------------c
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQS-TNRK------------S 271 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf-~~~~------------~ 271 (852)
|||+++........ ........||+.|+|||++.+..++.++|||||||++|||++|..|+ .+.. .
T Consensus 153 DFGla~~~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~ 231 (283)
T d1mqba_ 153 DFGLSRVLEDDPEA-TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFR 231 (283)
T ss_dssp CCCC------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC
T ss_pred ccchhhcccCCCcc-ceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCC
Confidence 99999765432211 11222356788999999998888999999999999999999965554 3221 1
Q ss_pred ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
......+|+.+.+++.+||+.||++|||+.++++.+
T Consensus 232 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L 267 (283)
T d1mqba_ 232 LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 267 (283)
T ss_dssp CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHH
Confidence 233567899999999999999999999999998864
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-40 Score=353.26 Aligned_cols=231 Identities=16% Similarity=0.206 Sum_probs=192.1
Q ss_pred ccccCCCCCCcccCCceEEEEEEEcC--CCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCe
Q psy3914 60 EPAVSFSGCFTQKHTFWKFHGGKKKG--SNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSL 133 (852)
Q Consensus 60 e~Ig~~~g~~~~~Gs~~~Vy~a~~k~--~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~ 133 (852)
++|| .|+||+||+|..+. +++.||||++.. ....+.+.+|+++|++++||||++++++++++ .
T Consensus 13 k~iG--------~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~---~ 81 (277)
T d1xbba_ 13 KELG--------SGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---S 81 (277)
T ss_dssp EEEE--------ECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS---S
T ss_pred CCcc--------cCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC---C
Confidence 4699 99999999998654 457899999976 22345789999999999999999999999764 5
Q ss_pred EEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhc
Q psy3914 134 VYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEK 211 (852)
Q Consensus 134 ~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~ 211 (852)
.||||||+. +|.+++.+ ...+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||+++.
T Consensus 82 ~~lvmE~~~~g~L~~~l~~----~~~l~~~~~~~i~~qi~~gl~ylH-~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~ 156 (277)
T d1xbba_ 82 WMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLE-ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA 156 (277)
T ss_dssp EEEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEEcCCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHhhHH-hCCcccCCCcchhhcccccCcccccchhhhhh
Confidence 789999998 79988843 367999999999999999999999 89999999999999999999999999999875
Q ss_pred cccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCc------------cccCcCCC
Q psy3914 212 ISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRK------------SLSNIDNI 278 (852)
Q Consensus 212 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~------------~l~~~~~i 278 (852)
....... ........||+.|+|||++.+..++.++|||||||++|||++ |..||.+.. ....+..+
T Consensus 157 ~~~~~~~-~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~ 235 (277)
T d1xbba_ 157 LRADENY-YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 235 (277)
T ss_dssp CCTTCSE-EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTC
T ss_pred ccccccc-cccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCCccc
Confidence 4322111 112223568889999999977788999999999999999998 899996532 12345678
Q ss_pred ChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 279 PENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 279 p~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
|+.+.+++.+||+.||.+|||+.++++.+
T Consensus 236 ~~~~~~li~~cl~~dp~~RPs~~~i~~~L 264 (277)
T d1xbba_ 236 PREMYDLMNLCWTYDVENRPGFAAVELRL 264 (277)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHhHCcCHHHHHHHh
Confidence 99999999999999999999999997754
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-40 Score=361.98 Aligned_cols=243 Identities=15% Similarity=0.203 Sum_probs=203.4
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcC---
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESP--- 129 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~--- 129 (852)
...|+..+.|| .|+||+||+|+++.+|+.||||++.... ....+|+++|++|+||||+++++++...
T Consensus 19 ~~~Y~~~k~LG--------~G~fg~Vy~a~~~~~~~~vAiK~i~~~~--~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~ 88 (350)
T d1q5ka_ 19 EVSYTDTKVIG--------NGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQIMRKLDHCNIVRLRYFFYSSGEK 88 (350)
T ss_dssp EEEEEEEEEEE--------EETTEEEEEEEETTTCCEEEEEEEECCS--SSCCHHHHHHHHCCCTTBCCEEEEEEEC--C
T ss_pred cCCcEeeeEEe--------eCcCeEEEEEEECCCCCEEEEEEECccc--hHHHHHHHHHHhcCCCCCCcEEEEEEecCcc
Confidence 34699999999 9999999999999999999999998732 2345899999999999999999998542
Q ss_pred -CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC-cEEEccc
Q psy3914 130 -SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG-EWKLGGL 206 (852)
Q Consensus 130 -~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g-~~KL~DF 206 (852)
...++||||||+. .+...+.........+++..++.+++||+.||.||| ++||+||||||+|||++.+| .+||+||
T Consensus 89 ~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH-~~~IiHrDiKp~NILl~~~~~~~kl~DF 167 (350)
T d1q5ka_ 89 KDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDF 167 (350)
T ss_dssp CSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-TTTEECCCCCGGGEEECTTTCCEEECCC
T ss_pred CCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH-hcCCcccCCCcceEEEecCCCceeEecc
Confidence 2256899999999 676666555556678999999999999999999999 99999999999999999875 8999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------ 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------ 273 (852)
|++...... .......||+.|+|||.+ ....++.++|||||||++|||++|..||.+.....
T Consensus 168 G~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~ 242 (350)
T d1q5ka_ 168 GSAKQLVRG-----EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242 (350)
T ss_dssp TTCEECCTT-----SCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred cchhhccCC-----cccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 998754321 122345789999999997 45678999999999999999999999995432110
Q ss_pred ----------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 274 ----------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 274 ----------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
....+++.+.+++.+||..||.+|||+.++++| +||++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H-----p~f~~ 308 (350)
T d1q5ka_ 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH-----SFFDE 308 (350)
T ss_dssp CHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS-----GGGGG
T ss_pred hHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC-----Hhhcc
Confidence 113568899999999999999999999999998 88864
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-40 Score=351.21 Aligned_cols=235 Identities=17% Similarity=0.255 Sum_probs=189.4
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCC---eEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEc
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN---EKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVES 128 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g---~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~ 128 (852)
+|++++.|| .|+||.||+|++..++ ..|+||+++. ....+.+.+|+++|++++||||+++++++.+
T Consensus 8 ~~~l~~~iG--------~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~ 79 (273)
T d1mp8a_ 8 RIELGRCIG--------EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE 79 (273)
T ss_dssp GEEEEEEEE--------ECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred HeEEEEEEe--------eCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 599999999 9999999999987654 5688998876 2234568899999999999999999999864
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
+.+||||||+. +|..++.. ....+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+||
T Consensus 80 ---~~~~iv~E~~~~g~l~~~~~~---~~~~l~~~~~~~~~~qi~~gl~ylH-~~~iiHrDlKp~NIll~~~~~~Kl~Df 152 (273)
T d1mp8a_ 80 ---NPVWIIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLSTALAYLE-SKRFVHRDIAARNVLVSSNDCVKLGDF 152 (273)
T ss_dssp ---SSCEEEEECCTTEEHHHHHHH---TTTTSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEEEETTEEEECC-
T ss_pred ---CeEEEEEEeccCCcHHhhhhc---cCCCCCHHHHHHHHHHHHHHhhhhc-ccCeeccccchhheeecCCCcEEEccc
Confidence 57899999998 68777642 3367899999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------cc
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LS 273 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~ 273 (852)
|+++...... ........||+.|+|||++.+..++.++|||||||++|||++ |.+||.+... ..
T Consensus 153 G~a~~~~~~~---~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~ 229 (273)
T d1mp8a_ 153 GLSRYMEDST---YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 229 (273)
T ss_dssp ---------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC
T ss_pred hhheeccCCc---ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 9987543211 112223457889999999988889999999999999999998 8889865422 23
Q ss_pred CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 274 NIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 274 ~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.+..+|+.+.+++.+||+.||.+|||+.++++++
T Consensus 230 ~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L 263 (273)
T d1mp8a_ 230 MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 263 (273)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 4568899999999999999999999999999874
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-39 Score=353.06 Aligned_cols=238 Identities=12% Similarity=0.161 Sum_probs=195.3
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCe----EEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE----KVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~----~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
...|++++.|| .|+||+||+|+++.+|+ +|+||.+.. ....+.+.+|+++|++++||||++++++
T Consensus 8 ~~dy~~~~~lG--------~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~ 79 (317)
T d1xkka_ 8 ETEFKKIKVLG--------SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 79 (317)
T ss_dssp TTTEEEEEEEE--------ECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred HHHCEEeeEEe--------cCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 34699999999 99999999999988876 588888765 3456789999999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+.++ ..++++|++. +|.+++.. ....+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||
T Consensus 80 ~~~~---~~~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~qi~~gl~yLH-~~~iiHrDlKp~NIll~~~~~~kl 152 (317)
T d1xkka_ 80 CLTS---TVQLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLE-DRRLVHRDLAARNVLVKTPQHVKI 152 (317)
T ss_dssp EESS---SEEEEEECCTTCBHHHHHHH---TSSSCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEEEETTEEEE
T ss_pred EecC---CeeEEEEeccCCcccccccc---cccCCCHHHHHHHHHHHHHHHHHHH-HcCcccCcchhhcceeCCCCCeEe
Confidence 9874 4677778777 68777743 3467899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc-----------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS----------- 271 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~----------- 271 (852)
+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 153 ~DFGla~~~~~~~~--~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~ 230 (317)
T d1xkka_ 153 TDFGLAKLLGAEEK--EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 230 (317)
T ss_dssp CCCSHHHHTTTTCC----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTC
T ss_pred eccccceecccccc--cccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC
Confidence 99999985533211 112223468899999999977789999999999999999998 7888865422
Q ss_pred -ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 272 -LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 272 -l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+..+..+|+.+.+++.+||+.||.+|||+.++++++
T Consensus 231 ~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l 267 (317)
T d1xkka_ 231 RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEF 267 (317)
T ss_dssp CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHH
Confidence 223467889999999999999999999999999874
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-39 Score=349.19 Aligned_cols=242 Identities=16% Similarity=0.209 Sum_probs=196.4
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~ 132 (852)
.+|++++.|| +|+||.||+|+.+.+ ..||||+++. ....+.+.+|+.+|++++||||+++++++.+ +
T Consensus 17 ~~~~i~~~iG--------~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~---~ 84 (285)
T d1fmka3 17 ESLRLEVKLG--------QGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---E 84 (285)
T ss_dssp GGEEEEEEEE--------ECSSCEEEEEEETTT-EEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS---S
T ss_pred HHEEEeeEEe--------eCCCeEEEEEEECCC-CEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEec---C
Confidence 3599999999 999999999999754 6799999987 4456789999999999999999999999854 4
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
.+|+||||+. +|..++... ....+++.++..++.||+.||+||| +.+++||||||+||+|+.+|.+||+|||+++
T Consensus 85 ~~~lv~Ey~~~g~l~~~~~~~--~~~~l~~~~~~~i~~~i~~gl~~LH-~~~ivH~DlKp~NIll~~~~~~kl~DfGla~ 161 (285)
T d1fmka3 85 PIYIVTEYMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLAR 161 (285)
T ss_dssp SCEEEECCCTTCBHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECGGGCEEECCCCTTC
T ss_pred CeEEEEEecCCCchhhhhhhc--ccccchHHHHHHHHHHHHHHHHHHh-hhheecccccceEEEECCCCcEEEcccchhh
Confidence 5799999999 687777432 2356899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCC-CCCc------------cccCcCC
Q psy3914 211 KISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQS-TNRK------------SLSNIDN 277 (852)
Q Consensus 211 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf-~~~~------------~l~~~~~ 277 (852)
...... ........||+.|+|||++....++.++|||||||++|||++|..|+ .+.. .......
T Consensus 162 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (285)
T d1fmka3 162 LIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 238 (285)
T ss_dssp -----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTT
T ss_pred hccCCC---ceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcc
Confidence 543221 11122356788999999998888899999999999999999975554 3221 1234578
Q ss_pred CChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 278 IPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 278 ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
+|+.+.+++.+||+.||++||+++++++.+. +||.+
T Consensus 239 ~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~---~~~~~ 274 (285)
T d1fmka3 239 CPESLHDLMCQCWRKEPEERPTFEYLQAFLE---DYFTS 274 (285)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH---TTTSC
T ss_pred cCHHHHHHHHHHcccCHhHCcCHHHHHHHHh---hhhcC
Confidence 8999999999999999999999999988654 45543
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.7e-39 Score=355.18 Aligned_cols=237 Identities=17% Similarity=0.186 Sum_probs=200.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCC-CCCcceEeeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLR-HPSILTFLDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~~~~ 132 (852)
.+|++++.|| .|+||+||+|+++.+|+.||||+++. .....+.+|+.+|+.++ ||||++++++++.....
T Consensus 35 d~y~i~~~LG--------~G~fg~V~~a~~~~~~~~vAiK~i~~-~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~ 105 (328)
T d3bqca1 35 DDYQLVRKLG--------RGKYSEVFEAINITNNEKVVVKILKP-VKKKKIKREIKILENLRGGPNIITLADIVKDPVSR 105 (328)
T ss_dssp GGEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEECS-SCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTC
T ss_pred cCeEEEEEEe--------cCcCeEEEEEEECCCCCEEEEEEECH-HHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCC
Confidence 3699999999 99999999999999999999999986 44677899999999996 99999999999865447
Q ss_pred eEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCC-cEEEcccchh
Q psy3914 133 LVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCG-EWKLGGLEYM 209 (852)
Q Consensus 133 ~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g-~~KL~DFg~a 209 (852)
++|+||||+. +|..+. ..+++..++.++.||+.||.||| +.||+||||||+||||+.++ .+||+|||++
T Consensus 106 ~~~~v~e~~~~~~L~~~~-------~~l~e~~i~~i~~qil~aL~~LH-~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a 177 (328)
T d3bqca1 106 TPALVFEHVNNTDFKQLY-------QTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 177 (328)
T ss_dssp SEEEEEECCCSCBGGGTT-------TSCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEEETTTTEEEECCGGGC
T ss_pred ceeEEEeecCCCcHHHHh-------cCCCHHHHHHHHHHHHHHHHHHh-hcccccccccccceEEcCCCCeeeecccccc
Confidence 8999999998 464433 57899999999999999999999 99999999999999999755 6999999998
Q ss_pred hccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc----------------
Q psy3914 210 EKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL---------------- 272 (852)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l---------------- 272 (852)
...... .......+|+.|+|||++. ...++.++|||||||++|+|++|..||......
T Consensus 178 ~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~ 252 (328)
T d3bqca1 178 EFYHPG-----QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 252 (328)
T ss_dssp EECCTT-----CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHH
T ss_pred eeccCC-----CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchh
Confidence 754322 1223456889999999984 456799999999999999999999998432110
Q ss_pred ---------------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 273 ---------------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 273 ---------------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
.....+++++.++|++||..||++|||+.++|+| +||++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H-----p~F~~v 325 (328)
T d3bqca1 253 YDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH-----PYFYTV 325 (328)
T ss_dssp HHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS-----GGGTTS
T ss_pred hhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC-----cccCCC
Confidence 0113467889999999999999999999999998 999763
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-39 Score=344.91 Aligned_cols=238 Identities=20% Similarity=0.256 Sum_probs=201.3
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC----CCchHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS----ADTYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
+|++.+.|| .|+||+||+|+++.+|+.||||+++. ......+.+|+.+|+.++||||+++++++.+.
T Consensus 3 ry~~i~~LG--------~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~- 73 (292)
T d1unla_ 3 KYEKLEKIG--------EGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD- 73 (292)
T ss_dssp SEEEEEEEE--------ECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECS-
T ss_pred CCEeeeEEe--------cCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccc-
Confidence 699999999 99999999999999999999999976 33467889999999999999999999999988
Q ss_pred CCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccch
Q psy3914 131 KSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEY 208 (852)
Q Consensus 131 ~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~ 208 (852)
..+|+|+|++. .|..++ ...+.+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.
T Consensus 74 -~~~~iv~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~q~~~aL~~lH-~~~IvHrDiKP~NIli~~~~~~kl~DFG~ 147 (292)
T d1unla_ 74 -KKLTLVFEFCDQDLKKYFD----SCNGDLDPEIVKSFLFQLLKGLGFCH-SRNVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp -SEEEEEEECCSEEHHHHHH----HTTTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred -cceeEEeeecccccccccc----ccccccchhHHHHHHHHHHHHHHHhh-cCCEeeecccCcccccccCCceeeeecch
Confidence 99999999998 455554 23468899999999999999999999 89999999999999999999999999999
Q ss_pred hhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCCCcc----------------
Q psy3914 209 MEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTNRKS---------------- 271 (852)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~---------------- 271 (852)
+....... .......+++.|+|||++. ...++.++|||||||++|||++|..||.....
T Consensus 148 a~~~~~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 223 (292)
T d1unla_ 148 ARAFGIPV----RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 223 (292)
T ss_dssp CEECCSCC----SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hhcccCCC----ccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCC
Confidence 98543321 1222345677899999984 44568899999999999999999888621110
Q ss_pred -------------------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCcc
Q psy3914 272 -------------------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 272 -------------------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~n 316 (852)
......+++.+.+++++||..||.+|||+.++|+| +||++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H-----p~f~~ 288 (292)
T d1unla_ 224 EEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH-----PYFSD 288 (292)
T ss_dssp TTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS-----GGGSS
T ss_pred hhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC-----hhhcC
Confidence 01124567889999999999999999999999998 89964
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-39 Score=355.69 Aligned_cols=242 Identities=16% Similarity=0.214 Sum_probs=199.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeEEcCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSVESPS 130 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~ 130 (852)
-+|++++.|| .|+||+||+|+++.+|+.||||++++.. ....+.+|+.+|++|+||||+++++++....
T Consensus 8 ~rY~~~~~LG--------~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~ 79 (345)
T d1pmea_ 8 PRYTNLSYIG--------EGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 79 (345)
T ss_dssp TTEEEEEECC-----------CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSS
T ss_pred CCeEEEEEEe--------eccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeecc
Confidence 3599999999 9999999999999999999999998622 3456789999999999999999999997652
Q ss_pred ---CCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEccc
Q psy3914 131 ---KSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGL 206 (852)
Q Consensus 131 ---~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DF 206 (852)
...+|++++++. +|.+++.. ..+++..++.++.||+.||.||| +.|||||||||+||+++.+|.+||+||
T Consensus 80 ~~~~~~~~l~~~~~~g~L~~~l~~-----~~l~~~~i~~i~~qil~al~yLH-~~~iiHRDIKp~NILl~~~~~~kl~Df 153 (345)
T d1pmea_ 80 IEQMKDVYLVTHLMGADLYKLLKT-----QHLSNDHICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDF 153 (345)
T ss_dssp TTTCCCEEEEEECCCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEECCC
T ss_pred ccccceEEEEEeecCCchhhhhhc-----CCCCHHHHHHHHHHHHHHHHHHH-HCCCcCCCCCcceEEECCCCCEEEccc
Confidence 134677776666 89999843 47999999999999999999999 899999999999999999999999999
Q ss_pred chhhccccccCCCCcccccccCCCcccCCccc-cCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccc-------------
Q psy3914 207 EYMEKISEASCIPMKRYSRYEDQSTYQIPENS-LSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL------------- 272 (852)
Q Consensus 207 g~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l------------- 272 (852)
|++......... ........||+.|+|||++ ....++.++||||+||++|+|++|..||.+....
T Consensus 154 G~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~ 232 (345)
T d1pmea_ 154 GLARVADPDHDH-TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 232 (345)
T ss_dssp TTCEECCGGGCB-CCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSC
T ss_pred CceeeccCCCcc-ceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCC
Confidence 998754332211 1223346789999999998 6667889999999999999999999999643210
Q ss_pred -----------------------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCCCCCc
Q psy3914 273 -----------------------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPGGYFK 315 (852)
Q Consensus 273 -----------------------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~~fF~ 315 (852)
.....+++.+.+++.+||..||.+|||+.++|+| +||+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h-----pf~~ 299 (345)
T d1pmea_ 233 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH-----PYLE 299 (345)
T ss_dssp CHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS-----GGGT
T ss_pred ChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC-----Hhhc
Confidence 0124567789999999999999999999999997 7875
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-39 Score=344.78 Aligned_cols=232 Identities=15% Similarity=0.216 Sum_probs=192.2
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceEeeeEEcCCCCeE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTFLDSVESPSKSLV 134 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~~~~ 134 (852)
.|++++.|| .|+||.||+|+. .|..||||+++.+...+.+.+|+++|++++||||+++++++.++ .+.+
T Consensus 8 ~~~~~~~lG--------~G~fg~Vy~~~~--~~~~vAvK~i~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~-~~~~ 76 (262)
T d1byga_ 8 ELKLLQTIG--------KGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGL 76 (262)
T ss_dssp GEEEEEEEE--------ECSSCEEEEEEE--TTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC---CC
T ss_pred HeEEeEEEe--------cCCCeEEEEEEE--CCeEEEEEEECcHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEec-CCcE
Confidence 489999999 999999999998 47899999998877778899999999999999999999987542 2568
Q ss_pred EEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccchhhcc
Q psy3914 135 YLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLEYMEKI 212 (852)
Q Consensus 135 yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~~~ 212 (852)
||||||+. +|.++|.+... ..+++..+..++.||+.||.||| +.+++||||||+||+++.+|.+||+|||+++..
T Consensus 77 ~lv~ey~~~g~L~~~l~~~~~--~~l~~~~~~~i~~~i~~al~ylH-~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~ 153 (262)
T d1byga_ 77 YIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLE-GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 153 (262)
T ss_dssp EEEECCCTTEEHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECTTSCEEECCCCC----
T ss_pred EEEEeccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHhhccccc-cCceeccccchHhheecCCCCEeecccccceec
Confidence 99999998 79999854321 35789999999999999999999 899999999999999999999999999998744
Q ss_pred ccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCcc------------ccCcCCCC
Q psy3914 213 SEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRKS------------LSNIDNIP 279 (852)
Q Consensus 213 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~~------------l~~~~~ip 279 (852)
... .....++..|+|||++.+..++.++|||||||++|||++ |.+||.+... ...+..+|
T Consensus 154 ~~~-------~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 226 (262)
T d1byga_ 154 SST-------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP 226 (262)
T ss_dssp ---------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCC
T ss_pred CCC-------CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCC
Confidence 321 123456779999999977789999999999999999998 6888754322 23346788
Q ss_pred hhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 280 ENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 280 ~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+.+.+++.+||..||.+|||+.++++++
T Consensus 227 ~~~~~li~~cl~~dP~~Rps~~~l~~~L 254 (262)
T d1byga_ 227 PAVYEVMKNCWHLDAAMRPSFLQLREQL 254 (262)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHHHHHcccCHhHCcCHHHHHHHH
Confidence 9999999999999999999999999875
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.8e-39 Score=347.83 Aligned_cols=241 Identities=14% Similarity=0.145 Sum_probs=200.8
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcC-----CCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeeeE
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-----SNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDSV 126 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-----~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~~ 126 (852)
+|++++.|| +|+||+||+|+.+. +++.||||+++... ....+.+|+.+|++++||||+++++++
T Consensus 14 ~~~~~~~lG--------~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~ 85 (301)
T d1lufa_ 14 NIEYVRDIG--------EGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC 85 (301)
T ss_dssp GCEEEEEEE--------ECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred HcEEeEEEe--------eCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence 599999999 99999999999863 56899999998622 345689999999999999999999999
Q ss_pred EcCCCCeEEEEEeecc--cHHHHHHhhh--------------------hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCce
Q psy3914 127 ESPSKSLVYLAVEYVE--PIFYHLDNTL--------------------KENNEKKQIYISWGIFQITRALSFLINDADLR 184 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~--~L~~~L~~~~--------------------~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~iv 184 (852)
.+. ..+++||||+. +|.++|.... .....++...+..++.||+.||.||| +.++|
T Consensus 86 ~~~--~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH-~~~iv 162 (301)
T d1lufa_ 86 AVG--KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS-ERKFV 162 (301)
T ss_dssp CSS--SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH-HTTCC
T ss_pred ccC--CceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcc-cCCeE
Confidence 987 89999999998 7999985321 11235788999999999999999999 89999
Q ss_pred ecccCCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCC-
Q psy3914 185 HNHVNHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGP- 263 (852)
Q Consensus 185 H~DIkp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~- 263 (852)
||||||+||+++.++.+||+|||+++....... ........+++.|+|||++.+..++.++|||||||++|||++|.
T Consensus 163 HrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~ 240 (301)
T d1lufa_ 163 HRDLATRNCLVGENMVVKIADFGLSRNIYSADY--YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL 240 (301)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGC--BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred eeEEcccceEECCCCcEEEccchhheeccCCcc--ccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCC
Confidence 999999999999999999999999975533221 12223456788999999998888999999999999999999985
Q ss_pred CCCCCCcc------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 264 LQSTNRKS------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 264 ~pf~~~~~------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
+||.+... ...+..+|+++.+++.+||+.+|.+|||+.++++.++
T Consensus 241 ~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~ 297 (301)
T d1lufa_ 241 QPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 297 (301)
T ss_dssp CTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 56754322 2235688999999999999999999999999988653
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-39 Score=344.88 Aligned_cols=238 Identities=13% Similarity=0.208 Sum_probs=189.9
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCC-C--eEEEEEEEeC-----CCchHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGS-N--EKVTIFLNDS-----ADTYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~-g--~~VaVKv~~~-----~~~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
.+|++.+.|| .|+||.||+|+...+ + ..||||+++. ....+.+.+|+++|++++||||++++++
T Consensus 8 ~d~~~~~~iG--------~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~ 79 (273)
T d1u46a_ 8 KDLRLLEKLG--------DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGV 79 (273)
T ss_dssp GGEEEEEECC------------CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred HHeEEEEEEe--------cCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 4599999999 999999999986543 3 4789999876 2334578999999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEE
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKL 203 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL 203 (852)
+.+ ..+|+||||+. +|.+++... .+.+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||
T Consensus 80 ~~~---~~~~lv~e~~~~~~l~~~~~~~---~~~l~~~~~~~~~~qi~~gl~ylH-~~~iiHrDikp~NIll~~~~~vkl 152 (273)
T d1u46a_ 80 VLT---PPMKMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLE-SKRFIHRDLAARNLLLATRDLVKI 152 (273)
T ss_dssp ECS---SSCEEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEEEETTEEEE
T ss_pred Eee---cchheeeeeecCcchhhhhhcc---cCCCCHHHHHHHHHHHHHHHHHhh-hCCEeeeeecHHHhccccccceee
Confidence 965 46789999998 677776432 356899999999999999999999 899999999999999999999999
Q ss_pred cccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCCCCc------------
Q psy3914 204 GGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQSTNRK------------ 270 (852)
Q Consensus 204 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~~~~------------ 270 (852)
+|||+++........ ........++..|+|||++.+..++.++|||||||++|||++ |..||.+..
T Consensus 153 ~DfGl~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~ 231 (273)
T d1u46a_ 153 GDFGLMRALPQNDDH-YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG 231 (273)
T ss_dssp CCCTTCEECCC-CCE-EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSC
T ss_pred ccchhhhhcccCCCc-ceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCC
Confidence 999998865332211 112223456779999999988889999999999999999998 899996432
Q ss_pred -cccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 271 -SLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 271 -~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
.......+|+.+.+++.+||+.||++|||+.++++.+
T Consensus 232 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L 269 (273)
T d1u46a_ 232 ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269 (273)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 2234568899999999999999999999999998753
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-39 Score=346.00 Aligned_cols=243 Identities=16% Similarity=0.251 Sum_probs=190.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcC-----CCeEEEEEEEeCC---CchHHHHHHHHHHHhC-CCCCcceEee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-----SNEKVTIFLNDSA---DTYEPALSYVKKLKTL-RHPSILTFLD 124 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-----~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~L-rHPnIlk~~d 124 (852)
.+|++++.|| .|+||.||+|+.+. +++.||||+++.. .....+.+|...+.++ +||||+.+++
T Consensus 13 ~~y~~~~~iG--------~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~ 84 (299)
T d1ywna1 13 DRLKLGKPLG--------RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 84 (299)
T ss_dssp GGEEEEEEEE--------ECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred HHEEEeeEEe--------ecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeee
Confidence 3599999999 99999999999764 3478999998762 2334566777777776 6899999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCC
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLK------------ENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNH 190 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~------------~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp 190 (852)
++... ...+|+||||+. +|.++|..... ....+++..+..++.||+.||.||| +.+|+||||||
T Consensus 85 ~~~~~-~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH-~~~ivHrDlKp 162 (299)
T d1ywna1 85 ACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAA 162 (299)
T ss_dssp EECST-TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCG
T ss_pred eeccC-CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHH-hCCCcCCcCCc
Confidence 87653 257999999998 79999964322 1345889999999999999999999 89999999999
Q ss_pred CCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhC-CCCCCCC
Q psy3914 191 TSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG-PLQSTNR 269 (852)
Q Consensus 191 ~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG-~~pf~~~ 269 (852)
+||+++.+|.+||+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||++| ..||.+.
T Consensus 163 ~NILl~~~~~~Kl~DFGla~~~~~~~~--~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~ 240 (299)
T d1ywna1 163 RNILLSEKNVVKICDFGLARDIYKDPD--YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 240 (299)
T ss_dssp GGEEECGGGCEEECC------CCSCTT--SCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred cceeECCCCcEEEccCcchhhcccccc--ccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999975432211 1222345789999999999888899999999999999999987 5677543
Q ss_pred cc-------------ccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhc
Q psy3914 270 KS-------------LSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNR 308 (852)
Q Consensus 270 ~~-------------l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~ 308 (852)
.. ...+..+|+.+.+++.+||+.||.+|||+.++++|+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~ 292 (299)
T d1ywna1 241 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 292 (299)
T ss_dssp CCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 22 2234678999999999999999999999999999853
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-38 Score=345.56 Aligned_cols=237 Identities=15% Similarity=0.199 Sum_probs=198.0
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCe--EEEEEEEeC---CCchHHHHHHHHHHHhC-CCCCcceEeeeEEc
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNE--KVTIFLNDS---ADTYEPALSYVKKLKTL-RHPSILTFLDSVES 128 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~--~VaVKv~~~---~~~~~~~~~E~~~Lk~L-rHPnIlk~~d~~e~ 128 (852)
.|++++.|| .|+||+||+|+++.+|. .|+||.++. ....+.+.+|+++|+++ +||||+++++++.+
T Consensus 11 ~~~~~~~iG--------~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~ 82 (309)
T d1fvra_ 11 DIKFQDVIG--------EGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH 82 (309)
T ss_dssp GCEEEEEEE--------CGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE
T ss_pred HcEEEEEEe--------eCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEec
Confidence 589999999 99999999999998886 467787765 33455789999999999 79999999999998
Q ss_pred CCCCeEEEEEeecc--cHHHHHHhh------------hhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEE
Q psy3914 129 PSKSLVYLAVEYVE--PIFYHLDNT------------LKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIF 194 (852)
Q Consensus 129 ~~~~~~yIVtE~v~--~L~~~L~~~------------~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIl 194 (852)
. +.+||||||+. +|.++|.+. ......+++..+..++.||+.||.||| +.+++||||||+|||
T Consensus 83 ~--~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH-~~~iiHrDlkp~NIL 159 (309)
T d1fvra_ 83 R--GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS-QKQFIHRDLAARNIL 159 (309)
T ss_dssp T--TEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEE
T ss_pred C--CeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhh-cCCccccccccceEE
Confidence 8 89999999998 799998543 123467899999999999999999999 899999999999999
Q ss_pred EccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCC-CCCCCCc---
Q psy3914 195 INSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGP-LQSTNRK--- 270 (852)
Q Consensus 195 V~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~-~pf~~~~--- 270 (852)
++.++.+||+|||+++...... ......||..|+|||.+.+..++.++|||||||++|||++|. +||.+..
T Consensus 160 ~~~~~~~kl~DfG~a~~~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~ 234 (309)
T d1fvra_ 160 VGENYVAKIADFGLSRGQEVYV-----KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE 234 (309)
T ss_dssp ECGGGCEEECCTTCEESSCEEC-----CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred EcCCCceEEccccccccccccc-----cccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHH
Confidence 9999999999999987443211 112345788999999997788999999999999999999975 5675432
Q ss_pred ---------cccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 271 ---------SLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 271 ---------~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
....+..+|+.+.++|.+||+.||++|||+.++++++
T Consensus 235 ~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L 280 (309)
T d1fvra_ 235 LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 280 (309)
T ss_dssp HHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 1223467899999999999999999999999999874
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-38 Score=348.43 Aligned_cols=239 Identities=16% Similarity=0.233 Sum_probs=201.8
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEE---cCCCeEEEEEEEeC------CCchHHHHHHHHHHHhCCC-CCcceEee
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKK---KGSNEKVTIFLNDS------ADTYEPALSYVKKLKTLRH-PSILTFLD 124 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~---k~~g~~VaVKv~~~------~~~~~~~~~E~~~Lk~LrH-PnIlk~~d 124 (852)
+|++++.|| +|+||+||+|++ +.+|+.||||++++ ....+.+.+|+++|++++| |||+++++
T Consensus 25 ~y~~~~~IG--------~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~ 96 (322)
T d1vzoa_ 25 NFELLKVLG--------TGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHY 96 (322)
T ss_dssp GEEEEEEEE--------ETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEE
T ss_pred ceEEEEEEe--------cCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeee
Confidence 499999999 999999999987 44689999999865 2345678899999999987 89999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEE
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
++++. ..+|+||||+. +|..++... +.+.+..+..++.||+.||.||| +.+++||||||+||+++.+|.+|
T Consensus 97 ~~~~~--~~~~~v~e~~~~~~L~~~i~~~----~~~~e~~~~~~~~Qi~~al~~lH-~~~ivHrDiKp~Nill~~~~~vk 169 (322)
T d1vzoa_ 97 AFQTE--TKLHLILDYINGGELFTHLSQR----ERFTEHEVQIYVGEIVLALEHLH-KLGIIYRDIKLENILLDSNGHVV 169 (322)
T ss_dssp EEEET--TEEEEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTSCEE
T ss_pred eeccC--CceeeeeecccccHHHHHHHhc----ccccHHHHHHHHHHHHHHHHHhh-cCCEEeccCCccceeecCCCCEE
Confidence 99988 89999999998 798888432 56789999999999999999999 89999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccC--CCCCcchhHHhHHHHHHHHHhCCCCCCCCccc--------
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLS--HVTKCSTDMYGLGILIWEVFNGPLQSTNRKSL-------- 272 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~--~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l-------- 272 (852)
|+|||++..+.... ........|++.|++||.+.+ ..++.++|||||||++|+|++|..||.+....
T Consensus 170 L~DFG~a~~~~~~~---~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~ 246 (322)
T d1vzoa_ 170 LTDFGLSKEFVADE---TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR 246 (322)
T ss_dssp ESCSSEEEECCGGG---GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHH
T ss_pred Eeeccchhhhcccc---cccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 99999987543321 222334678899999999843 35678999999999999999999999654322
Q ss_pred -------cCcCCCChhHHHHHHHhccCCCCCCC-----CHHHHHHhhcCCCCCCcc
Q psy3914 273 -------SNIDNIPENLKRVYLELISERPNQRP-----NPADFIMRNRKPGGYFKN 316 (852)
Q Consensus 273 -------~~~~~ip~~L~~li~~lL~~nP~~Rp-----s~~elL~~l~~~~~fF~n 316 (852)
..+..+++.+.+++++||..||.+|| +++++++| +||+.
T Consensus 247 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H-----pff~~ 297 (322)
T d1vzoa_ 247 RILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH-----LFFQK 297 (322)
T ss_dssp HHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS-----GGGTT
T ss_pred hcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC-----HhhcC
Confidence 22457899999999999999999999 48999987 89865
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-38 Score=343.93 Aligned_cols=241 Identities=16% Similarity=0.285 Sum_probs=197.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCC-------eEEEEEEEeCCC---chHHHHHHHHHHHhC-CCCCcceE
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN-------EKVTIFLNDSAD---TYEPALSYVKKLKTL-RHPSILTF 122 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g-------~~VaVKv~~~~~---~~~~~~~E~~~Lk~L-rHPnIlk~ 122 (852)
.+|++++.|| .|+||.||+|+...++ ..||||+++.+. ....+.+|+..++++ +||||+++
T Consensus 13 ~~~~l~~~iG--------~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~ 84 (299)
T d1fgka_ 13 DRLVLGKPLG--------EGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL 84 (299)
T ss_dssp GGEEEEEECC-------------CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred HHeEEeeEEe--------ecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEec
Confidence 4699999999 9999999999976554 479999997722 345677888888888 89999999
Q ss_pred eeeEEcCCCCeEEEEEeecc--cHHHHHHhhh------------hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceeccc
Q psy3914 123 LDSVESPSKSLVYLAVEYVE--PIFYHLDNTL------------KENNEKKQIYISWGIFQITRALSFLINDADLRHNHV 188 (852)
Q Consensus 123 ~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~------------~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DI 188 (852)
++++.++ ..+|+||||+. +|.++|.... .....+++..+..+++||+.||.||| +.++|||||
T Consensus 85 ~~~~~~~--~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH-~~~ivHrDi 161 (299)
T d1fgka_ 85 LGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA-SKKCIHRDL 161 (299)
T ss_dssp EEEECSS--SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCC
T ss_pred ccccccC--CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhh-hCCEEeeee
Confidence 9999987 88999999998 7999995332 12346899999999999999999999 999999999
Q ss_pred CCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCC
Q psy3914 189 NHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQST 267 (852)
Q Consensus 189 kp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~ 267 (852)
||+|||++.+|..||+|||+++....... ........+++.|+|||++.+..|+.++|||||||++|||++ |.+||.
T Consensus 162 Kp~NiLl~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~ 239 (299)
T d1fgka_ 162 AARNVLVTEDNVMKIADFGLARDIHHIDY--YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 239 (299)
T ss_dssp SGGGEEECTTCCEEECSTTCCCCGGGCCT--TCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cccceeecCCCCeEeccchhhcccccccc--ccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCC
Confidence 99999999999999999999886543221 222334667889999999987889999999999999999998 688885
Q ss_pred CCc------------cccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 268 NRK------------SLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 268 ~~~------------~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+.. ....+..+|+.+.+++.+||+.||.+|||+.++++.+
T Consensus 240 ~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L 291 (299)
T d1fgka_ 240 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 291 (299)
T ss_dssp TCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHH
Confidence 432 2234568899999999999999999999999999864
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-38 Score=342.23 Aligned_cols=239 Identities=13% Similarity=0.186 Sum_probs=196.9
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCC---eEEEEEEEeC---CCchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSN---EKVTIFLNDS---ADTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g---~~VaVKv~~~---~~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
+.+.+.|| .|+||+||+|+...++ ..||||+++. ......+.+|+++|++++||||+++++++...
T Consensus 29 ~~~~~~iG--------~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~ 100 (311)
T d1r0pa_ 29 VHFNEVIG--------RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 100 (311)
T ss_dssp EEEEEEEE--------EETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEET
T ss_pred eccceEEe--------ecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEec
Confidence 45578899 9999999999987654 3699999976 22346689999999999999999999997652
Q ss_pred CCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEcccc
Q psy3914 130 SKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLGGLE 207 (852)
Q Consensus 130 ~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~DFg 207 (852)
.+.+|+||||+. +|.+++.. ....++...+..++.||+.||.||| ..+|+||||||+|||+++++.+||+|||
T Consensus 101 -~~~~~lv~E~~~~g~l~~~~~~---~~~~~~~~~~~~i~~qia~gL~~lH-~~~iiHrDLK~~NILl~~~~~~kL~DFG 175 (311)
T d1r0pa_ 101 -EGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLA-SKKFVHRDLAARNCMLDEKFTVKVADFG 175 (311)
T ss_dssp -TTEEEEEEECCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECTTCCEEECSSG
T ss_pred -CCceEEEEEEeecCchhhhhcc---ccccchHHHHHHHHHHHHHhhhhhc-ccCcccCCccHHhEeECCCCCEEEeccc
Confidence 268999999998 78888742 2356778889999999999999999 9999999999999999999999999999
Q ss_pred hhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCc-------------cccC
Q psy3914 208 YMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRK-------------SLSN 274 (852)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~-------------~l~~ 274 (852)
+++.................||+.|+|||.+....++.++|||||||++|||++|..||.... ....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~ 255 (311)
T d1r0pa_ 176 LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 255 (311)
T ss_dssp GGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCC
T ss_pred chhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 998654432222223334568899999999977789999999999999999999877764321 1223
Q ss_pred cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 275 IDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 275 ~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+..+|+.+.+++.+||+.||++||++.++++++
T Consensus 256 p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L 288 (311)
T d1r0pa_ 256 PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 288 (311)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 467899999999999999999999999999875
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-38 Score=351.93 Aligned_cols=238 Identities=15% Similarity=0.184 Sum_probs=192.8
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhCCCCCcceEeeeEEcC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTLRHPSILTFLDSVESP 129 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~ 129 (852)
.+|++.+.|| .|+||+||+|+++.+|+.||||++... .....+.+|+.+|+.++||||+++++++...
T Consensus 17 ~~Y~i~~~LG--------~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~ 88 (355)
T d2b1pa1 17 KRYQNLKPIG--------SGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ 88 (355)
T ss_dssp TTEEEEEECS--------CC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred CCeEEEEEee--------cCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecc
Confidence 3599999999 999999999999999999999999862 2334688999999999999999999999643
Q ss_pred ----CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEccCCcEEEc
Q psy3914 130 ----SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINSCGEWKLG 204 (852)
Q Consensus 130 ----~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~~g~~KL~ 204 (852)
..+++|+||||+. +|...+. ..+++..++.++.||+.||.||| +.||+||||||+||+++.++.+|++
T Consensus 89 ~~~~~~~~~~iv~Ey~~~~l~~~~~------~~~~~~~i~~~~~qil~gl~~LH-~~giiHrDlKP~Nil~~~~~~~kl~ 161 (355)
T d2b1pa1 89 KTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSDCTLKIL 161 (355)
T ss_dssp CSTTTCCEEEEEEECCSEEHHHHHT------SCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred cccccCceeEEEEeccchHHHHhhh------cCCCHHHHHHHHHHHHHHHHHhh-hcccccccCCccccccccccceeee
Confidence 2278999999999 6666552 56899999999999999999999 8999999999999999999999999
Q ss_pred ccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCccccC----------
Q psy3914 205 GLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLSN---------- 274 (852)
Q Consensus 205 DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~~---------- 274 (852)
|||+++..... .......+|+.|+|||++.+..++.++||||+||++|+|++|..||.+.+....
T Consensus 162 df~~~~~~~~~-----~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~ 236 (355)
T d2b1pa1 162 DFGLARTAGTS-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 236 (355)
T ss_dssp CCCC--------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred chhhhhccccc-----cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccC
Confidence 99998743321 122345688999999999888899999999999999999999999964321100
Q ss_pred -------------------------------------------cCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcCCC
Q psy3914 275 -------------------------------------------IDNIPENLKRVYLELISERPNQRPNPADFIMRNRKPG 311 (852)
Q Consensus 275 -------------------------------------------~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~~~ 311 (852)
...+++.+.+|+++||..||++|||++++|+|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H----- 311 (355)
T d2b1pa1 237 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH----- 311 (355)
T ss_dssp CCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS-----
T ss_pred CCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC-----
Confidence 01134568899999999999999999999998
Q ss_pred CCCcc
Q psy3914 312 GYFKN 316 (852)
Q Consensus 312 ~fF~n 316 (852)
+||+.
T Consensus 312 pw~~~ 316 (355)
T d2b1pa1 312 PYINV 316 (355)
T ss_dssp TTTGG
T ss_pred cccCC
Confidence 99975
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-38 Score=351.22 Aligned_cols=245 Identities=15% Similarity=0.232 Sum_probs=198.3
Q ss_pred CccccccccCCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC----CchHHHHHHHHHHHhC
Q psy3914 39 SPKMWAFFGRDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA----DTYEPALSYVKKLKTL 114 (852)
Q Consensus 39 ~~~m~~~~~r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~----~~~~~~~~E~~~Lk~L 114 (852)
+.+.|.+.. +|++.+.|| .|+||+||+|+++.+|+.||||++.+. .....+.+|+++|++|
T Consensus 10 ~~~~~~~~~-------rY~i~~~LG--------~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l 74 (348)
T d2gfsa1 10 NKTIWEVPE-------RYQNLSPVG--------SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74 (348)
T ss_dssp SSSEEEEET-------TEEEEEECG--------GGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHC
T ss_pred CCccccCCC-------CeEEEEEEe--------cCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhc
Confidence 445665533 499999999 999999999999999999999999862 2334678999999999
Q ss_pred CCCCcceEeeeEEcC----CCCeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccC
Q psy3914 115 RHPSILTFLDSVESP----SKSLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVN 189 (852)
Q Consensus 115 rHPnIlk~~d~~e~~----~~~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIk 189 (852)
+||||+++++++... ....+|+++++.. +|.+++. ...+++..++.++.||+.||.||| +.||+|||||
T Consensus 75 ~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~-----~~~l~e~~~~~i~~qil~aL~~LH-~~giiHrDiK 148 (348)
T d2gfsa1 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIH-SADIIHRDLK 148 (348)
T ss_dssp CCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCC
T ss_pred CCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhcc-----cccccHHHHHHHHHHHHHHHHHHH-hCCCcccccC
Confidence 999999999998643 1134566555554 7998883 257999999999999999999999 8999999999
Q ss_pred CCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCcccc-CCCCCcchhHHhHHHHHHHHHhCCCCCCC
Q psy3914 190 HTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSL-SHVTKCSTDMYGLGILIWEVFNGPLQSTN 268 (852)
Q Consensus 190 p~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~sDIwSLG~ll~el~tG~~pf~~ 268 (852)
|+||+++.+|.+||+|||++..... ......|++.|+|||+.. ...++.++|||||||++|+|++|..||.+
T Consensus 149 p~NILi~~~~~~kl~dfg~a~~~~~-------~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~ 221 (348)
T d2gfsa1 149 PSNLAVNEDCELKILDFGLARHTDD-------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221 (348)
T ss_dssp GGGEEECTTCCEEECCC----CCTG-------GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CccccccccccccccccchhcccCc-------ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCC
Confidence 9999999999999999999874322 122456778999999974 45568899999999999999999999965
Q ss_pred Ccccc------------------------------------------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 269 RKSLS------------------------------------------NIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 269 ~~~l~------------------------------------------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
.+... ....+++.+.++|++||..||.+|||+.++|+|
T Consensus 222 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H 301 (348)
T d2gfsa1 222 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301 (348)
T ss_dssp SSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence 42110 023578899999999999999999999999998
Q ss_pred hcCCCCCCcc
Q psy3914 307 NRKPGGYFKN 316 (852)
Q Consensus 307 l~~~~~fF~n 316 (852)
+||+.
T Consensus 302 -----p~f~~ 306 (348)
T d2gfsa1 302 -----AYFAQ 306 (348)
T ss_dssp -----GGGTT
T ss_pred -----HhhCC
Confidence 88864
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=2e-37 Score=333.78 Aligned_cols=240 Identities=13% Similarity=0.097 Sum_probs=205.0
Q ss_pred CCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCC-CCcceEeeeEEcCCC
Q psy3914 53 DFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRH-PSILTFLDSVESPSK 131 (852)
Q Consensus 53 ~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrH-PnIlk~~d~~e~~~~ 131 (852)
+.+|+|++.|| .|+||+||+|+++.+|+.||||+++.......+++|++.++.|+| |||+.+++++.+.
T Consensus 4 g~~Y~i~~~iG--------~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~-- 73 (293)
T d1csna_ 4 GVHYKVGRRIG--------EGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEG-- 73 (293)
T ss_dssp TTTEEEEEEEE--------ECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEET--
T ss_pred CCceEEEEEEe--------cCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecC--
Confidence 45799999999 999999999999999999999999875555668899999999986 8999999999988
Q ss_pred CeEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc-----CCcEEEcc
Q psy3914 132 SLVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS-----CGEWKLGG 205 (852)
Q Consensus 132 ~~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~-----~g~~KL~D 205 (852)
...|+||||+. +|.+++.. ....++...+..++.|++.||.||| +.||+||||||+||+++. .+.+||+|
T Consensus 74 ~~~~~vme~~~~~l~~~~~~---~~~~~~~~~~~~i~~q~~~~l~~lH-~~giiHrDiKp~Nili~~~~~~~~~~vkl~D 149 (293)
T d1csna_ 74 LHNVLVIDLLGPSLEDLLDL---CGRKFSVKTVAMAAKQMLARVQSIH-EKSLVYRDIKPDNFLIGRPNSKNANMIYVVD 149 (293)
T ss_dssp TEEEEEEECCCCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHH-TTTEECCCCCGGGEEECCSSSTTTTCEEECC
T ss_pred CccEEEEEecCCCHHHHHHh---hccchhhHHHHHHHHHHHHHHHHHH-HCCceeccCCccceeecCcccccCCceEEcc
Confidence 99999999999 78888743 2357899999999999999999999 999999999999999974 57899999
Q ss_pred cchhhccccccC---CCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc---------
Q psy3914 206 LEYMEKISEASC---IPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--------- 273 (852)
Q Consensus 206 Fg~a~~~~~~~~---~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--------- 273 (852)
||+++.+.+... .+........||+.|+|||++.+..++.++|||||||++|||++|..||.+.....
T Consensus 150 FG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~ 229 (293)
T d1csna_ 150 FGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIG 229 (293)
T ss_dssp CTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHH
T ss_pred cceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHH
Confidence 999986543221 22233445789999999999988889999999999999999999999996542211
Q ss_pred ----------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 274 ----------NIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 274 ----------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
...++|+++.+++..|+..+|..||+.+.+.+.
T Consensus 230 ~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~ 272 (293)
T d1csna_ 230 EKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL 272 (293)
T ss_dssp HHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred hccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 125799999999999999999999998777553
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.6e-37 Score=335.06 Aligned_cols=239 Identities=12% Similarity=0.062 Sum_probs=198.2
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCCCCcceE-eeeEEcCCCC
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRHPSILTF-LDSVESPSKS 132 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrHPnIlk~-~d~~e~~~~~ 132 (852)
.+|++++.|| .|+||+||+|+++.+|+.||||++........+.+|+++++.++|++++.. ..++.+. .
T Consensus 7 ~rY~l~~~iG--------~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~--~ 76 (299)
T d1ckia_ 7 NRYRLGRKIG--------SGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEG--D 76 (299)
T ss_dssp TTEEEEEEEE--------ECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEET--T
T ss_pred CEEEEeEEEe--------eCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEEecC--C
Confidence 4699999999 999999999999999999999998875555568899999999987775554 5555655 8
Q ss_pred eEEEEEeecc-cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc---CCcEEEcccch
Q psy3914 133 LVYLAVEYVE-PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS---CGEWKLGGLEY 208 (852)
Q Consensus 133 ~~yIVtE~v~-~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~---~g~~KL~DFg~ 208 (852)
..|+||||+. +|...+. .....+++..+..++.||+.||.||| +.||+||||||+||+++. ++.+||+|||+
T Consensus 77 ~~~ivme~~~~~l~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~ 152 (299)
T d1ckia_ 77 YNVMVMELLGPSLEDLFN---FCSRKFSLKTVLLLADQMISRIEYIH-SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 152 (299)
T ss_dssp EEEEEEECCCCBHHHHHH---HTTTCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEECCGGGTTCEEECCCSS
T ss_pred EEEEEEEEcCCchhhhhh---hccCCCcHHHHHHHHHHHHHHHHHHH-HCCeeeccCCHhhccccccCCCceeeeeccCc
Confidence 8999999998 6766653 23467999999999999999999999 899999999999999875 45699999999
Q ss_pred hhccccccCC---CCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCCCCcccc------------
Q psy3914 209 MEKISEASCI---PMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQSTNRKSLS------------ 273 (852)
Q Consensus 209 a~~~~~~~~~---~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~------------ 273 (852)
++.+.+.... +........||+.|+|||++.+..++.++|||||||++|||++|..||.+.....
T Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 232 (299)
T d1ckia_ 153 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK 232 (299)
T ss_dssp CEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHH
T ss_pred ceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhccc
Confidence 9866543221 2223345679999999999988889999999999999999999999996432211
Q ss_pred -------CcCCCChhHHHHHHHhccCCCCCCCCHHHHHHh
Q psy3914 274 -------NIDNIPENLKRVYLELISERPNQRPNPADFIMR 306 (852)
Q Consensus 274 -------~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~ 306 (852)
....+|+++.+++.+||+.+|.+||++.++.+.
T Consensus 233 ~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~ 272 (299)
T d1ckia_ 233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 272 (299)
T ss_dssp HHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHH
T ss_pred CCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 135789999999999999999999999877653
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-37 Score=338.37 Aligned_cols=241 Identities=15% Similarity=0.205 Sum_probs=200.7
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEc-----CCCeEEEEEEEeCC---CchHHHHHHHHHHHhC-CCCCcceEee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKK-----GSNEKVTIFLNDSA---DTYEPALSYVKKLKTL-RHPSILTFLD 124 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k-----~~g~~VaVKv~~~~---~~~~~~~~E~~~Lk~L-rHPnIlk~~d 124 (852)
.+|++++.|| .|+||.||+|+.+ .++..||||+++.. .....+.+|+.+++.+ +||||+++++
T Consensus 23 ~~~~l~~~iG--------~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g 94 (311)
T d1t46a_ 23 NRLSFGKTLG--------AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG 94 (311)
T ss_dssp GGEEEEEEEE--------ECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred HHeEEeeEEe--------ecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 4699999999 9999999999864 45689999999872 2344678999999999 6999999999
Q ss_pred eEEcCCCCeEEEEEeecc--cHHHHHHhhh--------------hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceeccc
Q psy3914 125 SVESPSKSLVYLAVEYVE--PIFYHLDNTL--------------KENNEKKQIYISWGIFQITRALSFLINDADLRHNHV 188 (852)
Q Consensus 125 ~~e~~~~~~~yIVtE~v~--~L~~~L~~~~--------------~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DI 188 (852)
++++. ..+||||||+. +|.++|.... .....+++..+..++.||+.||+||| +.+++||||
T Consensus 95 ~~~~~--~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH-~~~ivHrDL 171 (311)
T d1t46a_ 95 ACTIG--GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA-SKNCIHRDL 171 (311)
T ss_dssp EECSS--SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCC
T ss_pred EEeeC--CEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH-hCCeeeccc
Confidence 99987 88999999998 7999986432 12346899999999999999999999 899999999
Q ss_pred CCCCEEEccCCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHh-CCCCCC
Q psy3914 189 NHTSIFINSCGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFN-GPLQST 267 (852)
Q Consensus 189 kp~NIlV~~~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~t-G~~pf~ 267 (852)
||+||+++.++..||+|||+++...+... ........||+.|+|||++.+..++.++|||||||++|||++ |.+||.
T Consensus 172 Kp~NIl~~~~~~~ki~DfG~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~ 249 (311)
T d1t46a_ 172 AARNILLTHGRITKICDFGLARDIKNDSN--YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 249 (311)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCTTSCTT--SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred ccccccccccCcccccccchheeccCCCc--ceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCC
Confidence 99999999999999999999986543221 222234578899999999987889999999999999999998 566664
Q ss_pred CCccc-------------cCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 268 NRKSL-------------SNIDNIPENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 268 ~~~~l-------------~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
+.... .....+|+.+.++|.+||+.||++|||+.++++.+
T Consensus 250 ~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L 302 (311)
T d1t46a_ 250 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302 (311)
T ss_dssp TCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 43221 22357899999999999999999999999999864
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-38 Score=338.98 Aligned_cols=243 Identities=15% Similarity=0.154 Sum_probs=202.6
Q ss_pred CCeeEeccccCCCCCCcccCCceEEEEEEEcC-----CCeEEEEEEEeCCC---chHHHHHHHHHHHhCCCCCcceEeee
Q psy3914 54 FAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKG-----SNEKVTIFLNDSAD---TYEPALSYVKKLKTLRHPSILTFLDS 125 (852)
Q Consensus 54 ~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~-----~g~~VaVKv~~~~~---~~~~~~~E~~~Lk~LrHPnIlk~~d~ 125 (852)
.+|++++.|| .|+||+||+|.++. ++..||||+++... ....+.+|++++++++||||++++++
T Consensus 20 ~~~~l~~~lG--------~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~ 91 (308)
T d1p4oa_ 20 EKITMSRELG--------QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGV 91 (308)
T ss_dssp GGEEEEEEEE--------ECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred HHeEEeeEEe--------eCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeE
Confidence 4599999999 99999999998753 35799999998622 23457899999999999999999999
Q ss_pred EEcCCCCeEEEEEeecc--cHHHHHHhhh------hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCEEEcc
Q psy3914 126 VESPSKSLVYLAVEYVE--PIFYHLDNTL------KENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSIFINS 197 (852)
Q Consensus 126 ~e~~~~~~~yIVtE~v~--~L~~~L~~~~------~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NIlV~~ 197 (852)
+..+ ..+|+||||+. +|.+++.... .....++...+..++.||+.||.||| ..+|+||||||+|||++.
T Consensus 92 ~~~~--~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH-~~~ivHrDlk~~NiLld~ 168 (308)
T d1p4oa_ 92 VSQG--QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN-ANKFVHRDLAARNCMVAE 168 (308)
T ss_dssp ECSS--SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH-HTTCBCSCCSGGGEEECT
T ss_pred EecC--CceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHh-hCCeeeceEcCCceeecC
Confidence 9887 88999999998 7988885321 11235688999999999999999999 899999999999999999
Q ss_pred CCcEEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhC-CCCCCCCc------
Q psy3914 198 CGEWKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNG-PLQSTNRK------ 270 (852)
Q Consensus 198 ~g~~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG-~~pf~~~~------ 270 (852)
++.+||+|||+++...+... ........+|+.|+|||.+.+..++.++|||||||++|||++| ..||.+..
T Consensus 169 ~~~~Kl~DFGla~~~~~~~~--~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~ 246 (308)
T d1p4oa_ 169 DFTVKIGDFGMTRDIYETDY--YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 246 (308)
T ss_dssp TCCEEECCTTCCCGGGGGGC--EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHH
T ss_pred CceEEEeecccceeccCCcc--eeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 99999999999876543222 1122234678899999999888889999999999999999998 57775432
Q ss_pred ------cccCcCCCChhHHHHHHHhccCCCCCCCCHHHHHHhhcC
Q psy3914 271 ------SLSNIDNIPENLKRVYLELISERPNQRPNPADFIMRNRK 309 (852)
Q Consensus 271 ------~l~~~~~ip~~L~~li~~lL~~nP~~Rps~~elL~~l~~ 309 (852)
....+..+|+.+.+++.+||+.||.+|||+.++++++++
T Consensus 247 ~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 291 (308)
T d1p4oa_ 247 FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 291 (308)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred HHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 123356788999999999999999999999999998753
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-37 Score=334.49 Aligned_cols=238 Identities=16% Similarity=0.184 Sum_probs=185.6
Q ss_pred CeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCCCc-hHHHHHHHHHHHhCCCCCcceEeeeEEcCCC--
Q psy3914 55 AYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSADT-YEPALSYVKKLKTLRHPSILTFLDSVESPSK-- 131 (852)
Q Consensus 55 ~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~~~-~~~~~~E~~~Lk~LrHPnIlk~~d~~e~~~~-- 131 (852)
.|.+.+.|| +|+||+||+|+. +|+.||||+++.... ....+.|+..++.++||||+++++++.++..
T Consensus 4 ~~~l~~~iG--------~G~fg~Vy~~~~--~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~ 73 (303)
T d1vjya_ 4 TIVLQESIG--------KGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73 (303)
T ss_dssp GEEEEEEEE--------CCSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSS
T ss_pred EEEEEEEEe--------eCCCeEEEEEEE--CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcc
Confidence 489999999 999999999987 689999999987322 2233456666678899999999999876522
Q ss_pred CeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-------cCCceecccCCCCEEEccCCcEE
Q psy3914 132 SLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLIN-------DADLRHNHVNHTSIFINSCGEWK 202 (852)
Q Consensus 132 ~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~-------~~~ivH~DIkp~NIlV~~~g~~K 202 (852)
..+||||||+. +|..+|++ ..++...+..++.|++.||.|||. +.+|+||||||+||+|+.+|.+|
T Consensus 74 ~~~~lv~Ey~~~g~L~~~l~~-----~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~K 148 (303)
T d1vjya_ 74 TQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EEEEEEEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEE
T ss_pred eEEEEEEecccCCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeE
Confidence 36899999998 79999953 468899999999999999999993 25999999999999999999999
Q ss_pred EcccchhhccccccCCCCcccccccCCCcccCCccccCCC------CCcchhHHhHHHHHHHHHhCCCCCCCCcccc---
Q psy3914 203 LGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHV------TKCSTDMYGLGILIWEVFNGPLQSTNRKSLS--- 273 (852)
Q Consensus 203 L~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~------~~~~sDIwSLG~ll~el~tG~~pf~~~~~l~--- 273 (852)
|+|||++..................||+.|+|||++.+.. ++.++|||||||++|||++|..||.......
T Consensus 149 l~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~ 228 (303)
T d1vjya_ 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp ECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred EEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccch
Confidence 9999998865443222222333567999999999974432 5668999999999999999987763211000
Q ss_pred --------------------C-cCCCC---------hhHHHHHHHhccCCCCCCCCHHHHHHhh
Q psy3914 274 --------------------N-IDNIP---------ENLKRVYLELISERPNQRPNPADFIMRN 307 (852)
Q Consensus 274 --------------------~-~~~ip---------~~L~~li~~lL~~nP~~Rps~~elL~~l 307 (852)
. ...+| ..+.+++.+||..||++|||+.++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L 292 (303)
T d1vjya_ 229 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 292 (303)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHH
T ss_pred hhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHH
Confidence 0 01222 2488999999999999999999998874
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.2e-35 Score=323.65 Aligned_cols=249 Identities=16% Similarity=0.215 Sum_probs=195.6
Q ss_pred CCCCCCCCeeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC-CchHHHHHHHHHHHhCC-----------
Q psy3914 48 RDASKDFAYEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA-DTYEPALSYVKKLKTLR----------- 115 (852)
Q Consensus 48 r~p~~~~~Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~-~~~~~~~~E~~~Lk~Lr----------- 115 (852)
+++..+.+|++++.|| .|+||+||+|+++.+|+.||||++++. ...+.+.+|+++|+.++
T Consensus 7 g~~~~~~rY~i~~~LG--------~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~ 78 (362)
T d1q8ya_ 7 GEPYKDARYILVRKLG--------WGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 78 (362)
T ss_dssp TCEETTTTEEEEEEEE--------ECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHH
T ss_pred CCCccCCcEEEEEEEe--------eCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcC
Confidence 3444456799999999 999999999999999999999999873 23466788999888875
Q ss_pred CCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCE
Q psy3914 116 HPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSI 193 (852)
Q Consensus 116 HPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NI 193 (852)
||||+++++++........+++++++. ...... ........+++..++.++.||+.||.|||...||+||||||+||
T Consensus 79 ~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NI 157 (362)
T d1q8ya_ 79 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLAL-IKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENV 157 (362)
T ss_dssp HTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHH-HHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGE
T ss_pred cCceEEEEEEeeeccccceeeeeeecccccccccc-cccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHe
Confidence 578999999887643356677777665 222222 22344567899999999999999999999559999999999999
Q ss_pred EEccCCc------EEEcccchhhccccccCCCCcccccccCCCcccCCccccCCCCCcchhHHhHHHHHHHHHhCCCCCC
Q psy3914 194 FINSCGE------WKLGGLEYMEKISEASCIPMKRYSRYEDQSTYQIPENSLSHVTKCSTDMYGLGILIWEVFNGPLQST 267 (852)
Q Consensus 194 lV~~~g~------~KL~DFg~a~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDIwSLG~ll~el~tG~~pf~ 267 (852)
+++.+|. +||+|||.+..... ......||+.|+|||++....++.++|||||||++++|++|..||.
T Consensus 158 ll~~~~~~~~~~~~kl~dfg~s~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~ 230 (362)
T d1q8ya_ 158 LMEIVDSPENLIQIKIADLGNACWYDE-------HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 230 (362)
T ss_dssp EEEEEETTTTEEEEEECCCTTCEETTB-------CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-
T ss_pred eeeccCcccccceeeEeeccccccccc-------ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCC
Confidence 9987654 99999999864322 1224568899999999987888999999999999999999999985
Q ss_pred CCccc----------------------------------------cC-------------------cCCCChhHHHHHHH
Q psy3914 268 NRKSL----------------------------------------SN-------------------IDNIPENLKRVYLE 288 (852)
Q Consensus 268 ~~~~l----------------------------------------~~-------------------~~~ip~~L~~li~~ 288 (852)
..... .. ....++.+.+|+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ 310 (362)
T d1q8ya_ 231 PDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSP 310 (362)
T ss_dssp --------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGG
T ss_pred CCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHH
Confidence 32110 00 01124568899999
Q ss_pred hccCCCCCCCCHHHHHHhhcCCCCCCcch
Q psy3914 289 LISERPNQRPNPADFIMRNRKPGGYFKND 317 (852)
Q Consensus 289 lL~~nP~~Rps~~elL~~l~~~~~fF~n~ 317 (852)
||..||.+|||+.++|+| +||++.
T Consensus 311 mL~~dP~~Rpta~e~L~H-----p~f~~~ 334 (362)
T d1q8ya_ 311 MLQLDPRKRADAGGLVNH-----PWLKDT 334 (362)
T ss_dssp GGCSSTTTCBCHHHHHTC-----GGGTTC
T ss_pred HCCCChhHCcCHHHHhcC-----cccCCC
Confidence 999999999999999997 899843
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.73 E-value=3.4e-19 Score=178.14 Aligned_cols=129 Identities=6% Similarity=0.031 Sum_probs=103.0
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeCC---------------C-----chHHHHHHHHHHHhCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDSA---------------D-----TYEPALSYVKKLKTLR 115 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~~---------------~-----~~~~~~~E~~~Lk~Lr 115 (852)
|.++++|| .|++|+||+|++. +|+.||||++... . ....+.+|+..+.++.
T Consensus 2 ~~vg~~IG--------~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~ 72 (191)
T d1zara2 2 DAIGKLMG--------EGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 72 (191)
T ss_dssp SEEEEEEE--------ECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred chhCCEee--------eCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHcc
Confidence 57899999 9999999999985 7899999987640 0 0123457888999999
Q ss_pred CCCcceEeeeEEcCCCCeEEEEEeecc--cHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCceecccCCCCE
Q psy3914 116 HPSILTFLDSVESPSKSLVYLAVEYVE--PIFYHLDNTLKENNEKKQIYISWGIFQITRALSFLINDADLRHNHVNHTSI 193 (852)
Q Consensus 116 HPnIlk~~d~~e~~~~~~~yIVtE~v~--~L~~~L~~~~~~~~~l~e~~i~~~l~QI~~aL~fLH~~~~ivH~DIkp~NI 193 (852)
|++++..++.. . .+++|||+. ++. .++...+..++.||+.+|.||| .+|++||||||+||
T Consensus 73 ~~~v~~~~~~~--~----~~lvme~~~~~~~~-----------~l~~~~~~~i~~ql~~~l~~lH-~~giiHrDiKP~NI 134 (191)
T d1zara2 73 GLAVPKVYAWE--G----NAVLMELIDAKELY-----------RVRVENPDEVLDMILEEVAKFY-HRGIVHGDLSQYNV 134 (191)
T ss_dssp TSSSCCEEEEE--T----TEEEEECCCCEEGG-----------GCCCSCHHHHHHHHHHHHHHHH-HTTEECSCCSTTSE
T ss_pred CCCcceEEEec--C----CEEEEEeecccccc-----------chhhHHHHHHHHHHHHHHHHHh-hCCEEEccCChhhe
Confidence 99999888653 1 378999998 221 1233446678899999999999 89999999999999
Q ss_pred EEccCCcEEEcccchhhcc
Q psy3914 194 FINSCGEWKLGGLEYMEKI 212 (852)
Q Consensus 194 lV~~~g~~KL~DFg~a~~~ 212 (852)
+++++| ++|+|||.+...
T Consensus 135 Lv~~~~-~~liDFG~a~~~ 152 (191)
T d1zara2 135 LVSEEG-IWIIDFPQSVEV 152 (191)
T ss_dssp EEETTE-EEECCCTTCEET
T ss_pred eeeCCC-EEEEECCCcccC
Confidence 998655 899999998643
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=8.7e-14 Score=160.18 Aligned_cols=207 Identities=21% Similarity=0.228 Sum_probs=116.2
Q ss_pred chhhhhhhcccCChhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHH
Q psy3914 376 VLSPLFKIGQMLEHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTV 455 (852)
Q Consensus 376 vL~~llki~~~l~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tl 455 (852)
+...+.+|+..++.+++...++|.+..|........|...+.-+..++.+++.. +...++|.+...+.|.++.||..+.
T Consensus 107 a~~~l~~i~~~~~~~~~~~~l~p~i~~L~~~~~~~~r~~a~~ll~~~~~~~~~~-~~~~l~~~~~~l~~D~~~~VR~~a~ 185 (588)
T d1b3ua_ 107 AVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSA-VKAELRQYFRNLCSDDTPMVRRAAA 185 (588)
T ss_dssp HHHHHHHHHTTSCHHHHHHTHHHHHHHHHTCSSHHHHHHHGGGHHHHTTTSCHH-HHHHHHHHHHHHHTCSCHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHhccCCHHHHHHHH
Confidence 344455555555555555555555555555544445555555555555555543 3334555555555555555555555
Q ss_pred HHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHH
Q psy3914 456 KSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVL 535 (852)
Q Consensus 456 ksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~ 535 (852)
+.+..++..++...+..++++.+..+. +|+++.||..++.|++.|+..++...+...++|.+...+.|+...+|.+++.
T Consensus 186 ~~l~~~~~~~~~~~~~~~l~~~l~~l~-~d~~~~vr~~a~~~l~~i~~~~~~~~~~~~i~~~l~~~~~D~~~~Vr~~~~~ 264 (588)
T d1b3ua_ 186 SKLGEFAKVLELDNVKSEIIPMFSNLA-SDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVAD 264 (588)
T ss_dssp HHHHHHHHTSCHHHHHHTHHHHHHHHH-TCSCHHHHTTHHHHHHHHHHHSCHHHHHHHTHHHHHHHHTCSSHHHHHHHHH
T ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHh-cCCchhhHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccccHHHHHHHHH
Confidence 555555555555555555555555554 4555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHhhccCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHh
Q psy3914 536 ALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLE 584 (852)
Q Consensus 536 ~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le 584 (852)
++..+...++.+.....++|.+..++.|++..||..+...+..++..+.
T Consensus 265 ~l~~l~~~~~~~~~~~~l~~~l~~ll~d~~~~vr~~a~~~l~~~~~~l~ 313 (588)
T d1b3ua_ 265 KFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLS 313 (588)
T ss_dssp THHHHHHHHCHHHHHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSC
T ss_pred hHHHHHHHhhhhhhhhhhhHHHHHHHhccchHHHHHHHHHHHHHHHHHh
Confidence 5555555555555555555555555555555555555555555555543
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=7.4e-14 Score=160.79 Aligned_cols=255 Identities=11% Similarity=0.124 Sum_probs=213.0
Q ss_pred hccCHHHHhHHHHhhhhhhccCCcccc----cccchhhhHhhhhcCCC--cccchhhhhhhcccCChhhhhcchhhhhhh
Q psy3914 329 QMKDKIDKNKFFNGLASAIDKFPKLIS----CHKVLPQLINAFEYGEA--GASVLSPLFKIGQMLEHEDYQAKIVPCVVK 402 (852)
Q Consensus 329 ~~k~~~eK~~Ff~~L~~~l~~fP~~~~----~~kiLP~Ll~~~e~~~~--~~~vL~~llki~~~l~~~ef~~~i~P~i~~ 402 (852)
.-.+..-+..-.+.|......++.... ...++|.|...+..... ...+...+..++..+..+.+...++|.+..
T Consensus 291 ~d~~~~vr~~a~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~vr~~~~~~l~~~~~~~~~~~~~~~l~p~l~~ 370 (588)
T d1b3ua_ 291 KDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLA 370 (588)
T ss_dssp TCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHHTCSCHHHHHHHHTTGGGGHHHHCHHHHHHHTHHHHHH
T ss_pred hccchHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHhhcCCChHHHHHHHHHHhhhhhccchhHHHHHHHHHHHH
Confidence 334455566666666666665554432 34667777666554321 122333444555666777888899999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHh
Q psy3914 403 LFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQ 482 (852)
Q Consensus 403 LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~ 482 (852)
++...+..+|..++..+..+...+....+.+.++|.+...+.|.++.+|+.+++.+..++..++...+...+.+.+.++.
T Consensus 371 ~l~d~~~~v~~~~~~~l~~~~~~~~~~~~~~~ll~~l~~~~~d~~~~~r~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l 450 (588)
T d1b3ua_ 371 QLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWL 450 (588)
T ss_dssp HHTCSCHHHHHHHHTTCHHHHHHSCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHGG
T ss_pred HHHhhhhhhhhHHHHHHHHHHhhcchhhhhhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcChHhHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999998888888888888877
Q ss_pred ccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhccc
Q psy3914 483 AKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLST 562 (852)
Q Consensus 483 ~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~ 562 (852)
.|+...||..++.+||.|+..++++.....++|.+.+.++|+....|.+++.++..+.++++.+.+..+++|.|..++.
T Consensus 451 -~D~~~~VR~~A~~~L~~l~~~~~~~~~~~~i~~~l~~~~~~~~~~~R~~~~~~l~~l~~~~~~~~~~~~ilp~ll~~~~ 529 (588)
T d1b3ua_ 451 -VDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAG 529 (588)
T ss_dssp -GCSSHHHHHHHHHHHHHHHHHHCHHHHHHHTHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHGGG
T ss_pred -cCCchhHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHcC
Confidence 6999999999999999999999998888889999999999999999999999999999999988899999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHh
Q psy3914 563 DPEKSVRDSAFKTIKGFLGKLE 584 (852)
Q Consensus 563 D~~~~Vr~~a~~~i~~~l~~le 584 (852)
|+..+||-.+.+++..+...++
T Consensus 530 D~v~nVR~~a~~~l~~i~~~~~ 551 (588)
T d1b3ua_ 530 DPVANVRFNVAKSLQKIGPILD 551 (588)
T ss_dssp CSCHHHHHHHHHHHHHHGGGSC
T ss_pred CCCHHHHHHHHHHHHHHHHHcC
Confidence 9999999999998887655443
|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.61 E-value=4.9e-07 Score=97.66 Aligned_cols=254 Identities=15% Similarity=0.153 Sum_probs=176.1
Q ss_pred HHHHhHHHHhhhhhhccCCcccc---cccchhhhHhhhhcCCCcccc----hhhhhhhcccC----Chhhhhcchhhhhh
Q psy3914 333 KIDKNKFFNGLASAIDKFPKLIS---CHKVLPQLINAFEYGEAGASV----LSPLFKIGQML----EHEDYQAKIVPCVV 401 (852)
Q Consensus 333 ~~eK~~Ff~~L~~~l~~fP~~~~---~~kiLP~Ll~~~e~~~~~~~v----L~~llki~~~l----~~~ef~~~i~P~i~ 401 (852)
...+...+..+........+... ...+++.++..+........+ +..+..+.... ..+.+...+.+.+.
T Consensus 143 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~il~~~~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 222 (458)
T d1ibrb_ 143 EHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVC 222 (458)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHHHHTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhHhhHH
Confidence 34455566666665554444333 234677777776654433322 22222232222 23445566788888
Q ss_pred hccccCCHHHHHHHHHHHHHHHccCCh---HHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhccc--------------
Q psy3914 402 KLFGSNDRATRSRLLLQLEHFIGHVPD---AIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPK-------------- 464 (852)
Q Consensus 402 ~LF~~~dr~iR~~LL~~L~~~~~~l~~---~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~k-------------- 464 (852)
.++..++..+|...++.|..+++.... ..+.+.+++.+..++.+.++.+|..++..+..++..
T Consensus 223 ~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~~~~~~ 302 (458)
T d1ibrb_ 223 EATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQ 302 (458)
T ss_dssp HHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCS
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHh
Confidence 899999999999888888888777653 234566778888888999999999998877666421
Q ss_pred -----CCccchh----hhHHHHHHHHhc------cCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHH
Q psy3914 465 -----LNYNNLN----VETLRHFARLQA------KDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPA 529 (852)
Q Consensus 465 -----l~~~~l~----~~lL~~l~kl~~------~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~ 529 (852)
.....+. ..+++.+..... .|.++.+|..+..|++.++..++.... ..+++.+...++|+.+.+
T Consensus 303 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~-~~l~~~i~~~l~s~~~~~ 381 (458)
T d1ibrb_ 303 GRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIV-PHVLPFIKEHIKNPDWRY 381 (458)
T ss_dssp SSCSSCCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTTTHH-HHHHHHHHHHTTCSSHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHhhhhcchhhhccccccHHHHHHHHHHHHHHhccHhhh-hHHHHHHHHHhcCCCHHH
Confidence 1111111 233444444321 356778999999999999999987654 567788889999999999
Q ss_pred HHHHHHHHHHHhhccC---HHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhhhc
Q psy3914 530 RNAGVLALAATQQYFL---LSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQVS 587 (852)
Q Consensus 530 R~a~l~~l~~~~~~~~---~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~~~ 587 (852)
|.||+.+|..+.+... .......++|.|.+++-|++..||.+|+.++..|.+.+....
T Consensus 382 r~aal~~l~~i~~~~~~~~~~~~l~~i~~~l~~~l~d~~~~VR~~a~~~l~~i~~~~~~~~ 442 (458)
T d1ibrb_ 382 RDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAA 442 (458)
T ss_dssp HHHHHHHHHHTSSSSCTTTTCTTTTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHGGGGC
T ss_pred HHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhccc
Confidence 9999999988775432 223456799999999999999999999999999988876543
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.99 E-value=3.5e-05 Score=94.27 Aligned_cols=263 Identities=11% Similarity=0.120 Sum_probs=167.3
Q ss_pred hHHHHHHHhccCCCCCCCCH-HHHHHhhcCCCCCCcchHHH-HH-HHHHHhhccCHHHHhHHHHhhhhhhccCCcccccc
Q psy3914 281 NLKRVYLELISERPNQRPNP-ADFIMRNRKPGGYFKNDLID-AL-LFLEEIQMKDKIDKNKFFNGLASAIDKFPKLISCH 357 (852)
Q Consensus 281 ~L~~li~~lL~~nP~~Rps~-~elL~~l~~~~~fF~n~lv~-~l-~~Leel~~k~~~eK~~Ff~~L~~~l~~fP~~~~~~ 357 (852)
.+..++.+|.++||.-|.-+ .++++.+....-.+++...+ .+ ..+.-+.-++.+-+..-.+.|......+++... .
T Consensus 4 ~~~~ll~k~~~~D~d~R~ma~~dl~~~l~~~~~~~~~~~~~~i~~~ll~~L~D~~~~Vq~~A~k~l~~l~~~~~~~~~-~ 82 (1207)
T d1u6gc_ 4 HISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQV-E 82 (1207)
T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCHHHH-H
T ss_pred hHHHHHHhcCCCCHhHHHHHHHHHHHHHhhcccccChHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCcHhhH-H
Confidence 46788899999999988643 45666665433333333222 22 223444556667777777777777777776533 3
Q ss_pred cchhhhHhhhhcCCC-----cccchhhhhh-hcccCChhhh----hcchhhhhhhccc-cCCHHHHHHHHHHHHHHHccC
Q psy3914 358 KVLPQLINAFEYGEA-----GASVLSPLFK-IGQMLEHEDY----QAKIVPCVVKLFG-SNDRATRSRLLLQLEHFIGHV 426 (852)
Q Consensus 358 kiLP~Ll~~~e~~~~-----~~~vL~~llk-i~~~l~~~ef----~~~i~P~i~~LF~-~~dr~iR~~LL~~L~~~~~~l 426 (852)
.+++.|+..+..... ....|..++. +........+ ...+++.+..... ..+..+|...++-|..++.++
T Consensus 83 ~l~~~L~~~l~~~~~~~r~~~~~~L~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~al~~l~~l~~~~ 162 (1207)
T d1u6gc_ 83 TIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQ 162 (1207)
T ss_dssp HHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCchhhhHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHh
Confidence 456666665543221 1122222221 1111111222 2334444444333 356678888888888777776
Q ss_pred ChHH--HhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccc
Q psy3914 427 PDAI--VNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHH 504 (852)
Q Consensus 427 ~~~~--v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~ 504 (852)
.... ....|++.++..+.+..+.||..++..+-.++..++...+. ++++++......+....+|...+-|++.|+..
T Consensus 163 g~~l~~~~~~il~~l~~~l~~~~~~vR~~A~~~l~~l~~~~~~~~~~-~~~~~ll~~l~~~~~~~~~~~~~~~l~~l~~~ 241 (1207)
T d1u6gc_ 163 GGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFV-DLIEHLLSELSKNDSMSTTRTYIQCIAAISRQ 241 (1207)
T ss_dssp CSSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC----CT-THHHHHHHHHHHTCSSCSCTTHHHHHHHHHHH
T ss_pred hHhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHH
Confidence 5432 24578999999999999999999999999999988876644 45565554444677888898999999999877
Q ss_pred cChhhHH--HHHHHHHHhhccCCChHHHHHHHHHHHHHhhccC
Q psy3914 505 LHPQIRQ--KVLISAFSRAMRDPFPPARNAGVLALAATQQYFL 545 (852)
Q Consensus 505 L~~~~~~--~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~ 545 (852)
.+..... ..+++.+.+.+.+.....|..++.++..+...+.
T Consensus 242 ~~~~~~~~l~~i~~~l~~~l~~~~~~~r~~al~~l~~l~~~~~ 284 (1207)
T d1u6gc_ 242 AGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCP 284 (1207)
T ss_dssp SSGGGTTSCTTHHHHHHHHHSSCCTTTHHHHHHHHHHHHHCTT
T ss_pred cchhhHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhCh
Confidence 6654322 3567888888999999999999999988776665
|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.98 E-value=3.5e-05 Score=82.85 Aligned_cols=197 Identities=14% Similarity=0.173 Sum_probs=152.0
Q ss_pred hhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCCh---HHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCC
Q psy3914 390 EDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPD---AIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLN 466 (852)
Q Consensus 390 ~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~---~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~ 466 (852)
.++...++|.+..+....|..++...+.-+..++.+-.. ......++|.++..+.+.++.++..+++.+..++..-+
T Consensus 183 ~~~~~~~l~~l~~ll~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~~~~~~~~~al~~l~~l~~~~~ 262 (434)
T d1q1sc_ 183 LDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTD 262 (434)
T ss_dssp HHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCH
T ss_pred hhhhhhHHHHHHHHHhccccchhhhHHhhhcccchhhhhhHHHHhhcccchhcccccccchhhhhhchhhhhhhHHhhhh
Confidence 345677899999999999999988777777777655321 12345689999999999999999999999988875322
Q ss_pred c---cchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccCh---hhHHHHHHHHHHhhccCCChHHHHHHHHHHHHH
Q psy3914 467 Y---NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHP---QIRQKVLISAFSRAMRDPFPPARNAGVLALAAT 540 (852)
Q Consensus 467 ~---~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~---~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~ 540 (852)
+ ..++..+++.+.++. .+....||..++.+|+.++..-.. .....-+++.+.+.+.++...+|..++.++..+
T Consensus 263 ~~~~~~~~~~~~~~l~~ll-~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~li~~l~~~~~~v~~~a~~~l~nl 341 (434)
T d1q1sc_ 263 EQTQKVIDAGALAVFPSLL-TNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNY 341 (434)
T ss_dssp HHHHHHHHTTGGGGHHHHT-TCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccccchHHHhh-cccchhhhHHHHHHHhhhccccchhHHHHhhhhhHHHHHHHHhccChHHHHHHHHHHHHH
Confidence 2 233455677888876 478888999999999999864322 123334678899999999999999999999888
Q ss_pred hhccCHHH----HHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhhhc
Q psy3914 541 QQYFLLSE----VAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQVS 587 (852)
Q Consensus 541 ~~~~~~~~----~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~~~ 587 (852)
....+.+. +-..++|.|+.++-.++..++..+..+|..++...++..
T Consensus 342 ~~~~~~~~~~~l~~~~~i~~L~~ll~~~d~~~~~~~l~~l~~ll~~~~~~~ 392 (434)
T d1q1sc_ 342 TSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLG 392 (434)
T ss_dssp HHHSCHHHHHHHHHTTCHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HhcCCHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 77777654 334579999999999999999999999988887666554
|
| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: MTH187 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.94 E-value=6.6e-07 Score=79.39 Aligned_cols=109 Identities=13% Similarity=0.196 Sum_probs=85.1
Q ss_pred cCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhc
Q psy3914 443 FLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAM 522 (852)
Q Consensus 443 ~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~l 522 (852)
+.|.++.||.++++++-. ++.. .++.|.++. +|+++.||.+++.|||++.. ...++++...|
T Consensus 1 L~D~~~~VR~~A~~aL~~----~~~~-----~~~~L~~~l-~d~~~~vR~~a~~~L~~~~~--------~~~~~~L~~~l 62 (111)
T d1te4a_ 1 MADENKWVRRDVSTALSR----MGDE-----AFEPLLESL-SNEDWRIRGAAAWIIGNFQD--------ERAVEPLIKLL 62 (111)
T ss_dssp CCSSCCCSSSSCCSSTTS----CSST-----THHHHHHGG-GCSCHHHHHHHHHHHGGGCS--------HHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHH----hCHH-----HHHHHHHHH-cCCCHHHHHHHHHHHHhcch--------hhhHHHHHhhh
Confidence 468888999888876543 3332 344555554 59999999999999997753 23567888889
Q ss_pred cCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHH
Q psy3914 523 RDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIK 577 (852)
Q Consensus 523 kDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~ 577 (852)
+|+.+.+|.+++.+|..+.. ..++|.|..++-|++..||..|+.+++
T Consensus 63 ~d~~~~VR~~a~~aL~~i~~--------~~~~~~L~~ll~d~~~~vr~~A~~aL~ 109 (111)
T d1te4a_ 63 EDDSGFVRSGAARSLEQIGG--------ERVRAAMEKLAETGTGFARKVAVNYLE 109 (111)
T ss_dssp HHCCTHHHHHHHHHHHHHCS--------HHHHHHHHHHTTSCCTHHHHHHHHHGG
T ss_pred ccchhHHHHHHHHHHHHhCc--------cchHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 99999999999999976542 467899999999999999999988775
|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin beta2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.91 E-value=1.6e-05 Score=94.75 Aligned_cols=175 Identities=14% Similarity=0.092 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCcc--chhhhHHHHHHHHhccCCCc
Q psy3914 411 TRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYN--NLNVETLRHFARLQAKDDQG 488 (852)
Q Consensus 411 iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~--~l~~~lL~~l~kl~~~D~~~ 488 (852)
+|.+...-|..++....++ +...++|.+...+.+.++.+|++++.++-.+++...+. ..-.++++.+.... +|+++
T Consensus 373 ~r~~a~~~L~~l~~~~~~~-il~~~l~~l~~~l~s~~~~~reaa~~alg~i~eg~~~~~~~~l~~li~~l~~~l-~d~~~ 450 (888)
T d1qbkb_ 373 LRKCSAAALDVLANVYRDE-LLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCL-SDKKA 450 (888)
T ss_dssp SHHHHHHHSTTTTTTCCSS-SHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHTTTSHHHHTTTHHHHHHHHHHHT-TSSCH
T ss_pred HHHHHHHHHhhHhhhhHHH-HHHHHHHHHHHhhccchhHHHHHHHHHhhhhhhhHHHHhcccchhhhHHHHHhc-cCCCH
Confidence 3555555555566555544 56789999999999999999999998888777654332 12255778877776 69999
Q ss_pred ceeeehhhhhcccccccChhhH---HHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccC--HHHHHHhHhhhhhhcccC
Q psy3914 489 GIRTNTTVCVGKIAHHLHPQIR---QKVLISAFSRAMRDPFPPARNAGVLALAATQQYFL--LSEVAQRILPALCQLSTD 563 (852)
Q Consensus 489 ~IR~nt~iclgkia~~L~~~~~---~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~--~~~~a~~ILP~L~~l~~D 563 (852)
.||..++.|||+++..+..... ...+++.+...+.|+...+|.+++.+|..+.+..+ .......|++.|..++-+
T Consensus 451 ~Vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~l~d~~~~V~~~a~~al~~l~~~~~~~l~p~~~~il~~l~~~l~~ 530 (888)
T d1qbkb_ 451 LVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSK 530 (888)
T ss_dssp HHHHHHHHHHHHTHHHHHSSCHHHHTTTHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTTSSGGGHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhh
Confidence 9999999999999987754322 24467778888999999999999999987766543 223457788888888888
Q ss_pred CChhhHHHHHHHHHHHHHHHhhhc
Q psy3914 564 PEKSVRDSAFKTIKGFLGKLEQVS 587 (852)
Q Consensus 564 ~~~~Vr~~a~~~i~~~l~~le~~~ 587 (852)
....++..++.++..+.+.+..+-
T Consensus 531 ~~~~~~~~~~~al~~l~~~~~~~~ 554 (888)
T d1qbkb_ 531 YQHKNLLILYDAIGTLADSVGHHL 554 (888)
T ss_dssp CCHHHHHHHHHHHHHHHHHHGGGG
T ss_pred hhHHHHHHHHHHHHHHHHhhhccc
Confidence 777777777777777777665543
|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.87 E-value=0.00027 Score=82.24 Aligned_cols=252 Identities=14% Similarity=0.136 Sum_probs=173.0
Q ss_pred HHHhHHHHhhhhhhccCCcccc---cccchhhhHhhhhcCCCccc----chhhhhhhcc----cCChhhhhcchhhhhhh
Q psy3914 334 IDKNKFFNGLASAIDKFPKLIS---CHKVLPQLINAFEYGEAGAS----VLSPLFKIGQ----MLEHEDYQAKIVPCVVK 402 (852)
Q Consensus 334 ~eK~~Ff~~L~~~l~~fP~~~~---~~kiLP~Ll~~~e~~~~~~~----vL~~llki~~----~l~~~ef~~~i~P~i~~ 402 (852)
.-+...+.-|......+..... ...++|.++..+........ ++..+..+.. ......+...++..+..
T Consensus 145 ~~~~~~l~~l~~i~~~~~~~~~~~~~~~il~~i~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~ 224 (876)
T d1qgra_ 145 HMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCE 224 (876)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 3344455555544444433222 23467777766654332111 1222211122 22334556678888888
Q ss_pred ccccCCHHHHHHHHHHHHHHHccCCh---HHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccC--------------
Q psy3914 403 LFGSNDRATRSRLLLQLEHFIGHVPD---AIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKL-------------- 465 (852)
Q Consensus 403 LF~~~dr~iR~~LL~~L~~~~~~l~~---~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl-------------- 465 (852)
+...++..+|...++.|..++..... ..+.+.+++.+..++.+....++.+++.....++...
T Consensus 225 ~~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 304 (876)
T d1qgra_ 225 ATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQG 304 (876)
T ss_dssp HTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhh
Confidence 89999999998888888888777654 3455678889999999999999988887655554311
Q ss_pred -----C----ccchhhhHHHHHHHHhc------cCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHH
Q psy3914 466 -----N----YNNLNVETLRHFARLQA------KDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPAR 530 (852)
Q Consensus 466 -----~----~~~l~~~lL~~l~kl~~------~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R 530 (852)
. .......+++.+..... .|..+.+|..+..|+..++..++... ...+++.+...+.++....|
T Consensus 305 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~-~~~~~~~i~~~l~~~~~~~r 383 (876)
T d1qgra_ 305 RPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDI-VPHVLPFIKEHIKNPDWRYR 383 (876)
T ss_dssp SCCSSCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHGGGG-HHHHHHHHHHHTTCSSHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhHHHHHhcccccccccchHHHHHHHHHHHHHHHhhhhh-hhhhHHHHHHhhccchHHHH
Confidence 0 11122345555554432 34577899999999999998887664 45667888888999999999
Q ss_pred HHHHHHHHHHhhccCH---HHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhhh
Q psy3914 531 NAGVLALAATQQYFLL---SEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQV 586 (852)
Q Consensus 531 ~a~l~~l~~~~~~~~~---~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~~ 586 (852)
.+++.++..+...... ......++|.+.+++.|++..||..++.++..+.+.+...
T Consensus 384 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~ 442 (876)
T d1qgra_ 384 DAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEA 442 (876)
T ss_dssp HHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHcchh
Confidence 9999999888776654 4566889999999999999999999999999998877644
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.82 E-value=5.4e-05 Score=76.47 Aligned_cols=75 Identities=13% Similarity=-0.007 Sum_probs=53.0
Q ss_pred eeEeccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC--CCchHHHHHHHHHHHhCC-CCCcceEeeeEEcCCCC
Q psy3914 56 YEVGEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS--ADTYEPALSYVKKLKTLR-HPSILTFLDSVESPSKS 132 (852)
Q Consensus 56 Y~i~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~--~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~~~~ 132 (852)
|++.+..+ .++...||+... ++..+.||.... ......+.+|...+..|. +--+.+++.+.+.+ +
T Consensus 16 ~~~~~~~~--------G~s~~~v~rv~~--~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~--~ 83 (263)
T d1j7la_ 16 YRCVKDTE--------GMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHD--G 83 (263)
T ss_dssp SEEEECSC--------CCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEET--T
T ss_pred eEEEEcCC--------CCCCCcEEEEEe--CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecC--C
Confidence 66666554 345568888753 566778888765 233445778888888774 43467788888877 8
Q ss_pred eEEEEEeecc
Q psy3914 133 LVYLAVEYVE 142 (852)
Q Consensus 133 ~~yIVtE~v~ 142 (852)
..|+||+++.
T Consensus 84 ~~~lv~~~l~ 93 (263)
T d1j7la_ 84 WSNLLMSEAD 93 (263)
T ss_dssp EEEEEEECCS
T ss_pred ceEEEEEecc
Confidence 8999999997
|
| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: Hypothetical protein YibA species: Escherichia coli [TaxId: 562]
Probab=97.72 E-value=9.4e-05 Score=74.19 Aligned_cols=158 Identities=14% Similarity=0.097 Sum_probs=113.2
Q ss_pred hhhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHH
Q psy3914 396 IVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETL 475 (852)
Q Consensus 396 i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL 475 (852)
....|.+++..+++.+|...+..|..+-. +..+|.+...+.|.++.||..++.++..+...-. ....++
T Consensus 20 ~~~~L~~~L~d~~~~vR~~A~~~L~~~~~--------~~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~~~~---~~~~~~ 88 (276)
T d1oyza_ 20 NDDELFRLLDDHNSLKRISSARVLQLRGG--------QDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKK---CEDNVF 88 (276)
T ss_dssp CHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------HHHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCTT---THHHHH
T ss_pred CHHHHHHHhcCCCHHHHHHHHHHHHhhCC--------HhHHHHHHHHHcCCCHHHHHHHHHHHHHhccccc---cccchH
Confidence 34567789999999999998888876632 4578999999999999999999998876643222 133345
Q ss_pred HHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhh
Q psy3914 476 RHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILP 555 (852)
Q Consensus 476 ~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP 555 (852)
+.+.....+|+++.||.+++.+|+++...-. .....+++.+...+.|+.+.+|.+++.++....+ ...+|
T Consensus 89 ~~l~~~~l~d~~~~vr~~a~~aL~~~~~~~~--~~~~~~~~~l~~~~~d~~~~vr~~a~~~l~~~~~--------~~~~~ 158 (276)
T d1oyza_ 89 NILNNMALNDKSACVRATAIESTAQRCKKNP--IYSPKIVEQSQITAFDKSTNVRRATAFAISVIND--------KATIP 158 (276)
T ss_dssp HHHHHHHHHCSCHHHHHHHHHHHHHHHHHCG--GGHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC-----------CCHH
T ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHccccc--hhhHHHHHHHHHHhcCcchHHHHHHHHHHhhcch--------HHHHH
Confidence 5555555579999999999999999886532 2345678888899999999999988877654332 23344
Q ss_pred hhhhcccCCChhhHHHHHH
Q psy3914 556 ALCQLSTDPEKSVRDSAFK 574 (852)
Q Consensus 556 ~L~~l~~D~~~~Vr~~a~~ 574 (852)
.+..++.+.+..+|..+..
T Consensus 159 ~l~~l~~~~~~~~~~~~~~ 177 (276)
T d1oyza_ 159 LLINLLKDPNGDVRNWAAF 177 (276)
T ss_dssp HHHHHHTCSSHHHHHHHHH
T ss_pred HHHHhcccccchhhhhHHH
Confidence 5555556666666654443
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.69 E-value=7e-05 Score=91.54 Aligned_cols=183 Identities=14% Similarity=0.108 Sum_probs=133.6
Q ss_pred hhhccccCCHHHHHHHHHHHHHHHccCC---hHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHH
Q psy3914 400 VVKLFGSNDRATRSRLLLQLEHFIGHVP---DAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLR 476 (852)
Q Consensus 400 i~~LF~~~dr~iR~~LL~~L~~~~~~l~---~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~ 476 (852)
|..-+.++|+.+|++.+..|...+..-. .+....+|++.|+..+.|.++.||.+++|.+..++.++....+ ..+++
T Consensus 8 ll~k~~~~D~d~R~ma~~dl~~~l~~~~~~~~~~~~~~i~~~ll~~L~D~~~~Vq~~A~k~l~~l~~~~~~~~~-~~l~~ 86 (1207)
T d1u6gc_ 8 LLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQV-ETIVD 86 (1207)
T ss_dssp HHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCHHHH-HHHHH
T ss_pred HHHhcCCCCHhHHHHHHHHHHHHHhhcccccChHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCcHhhH-HHHHH
Confidence 3334689999999888777776654421 2345677999999999999999999999999999999997764 45677
Q ss_pred HHHHHhccCCCcceeeehhhhhcccccccChhh--------HHHHHHHHHHhh-ccCCChHHHHHHHHHHHHHhhccCH-
Q psy3914 477 HFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQI--------RQKVLISAFSRA-MRDPFPPARNAGVLALAATQQYFLL- 546 (852)
Q Consensus 477 ~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~--------~~~vLi~af~r~-lkDp~~~~R~a~l~~l~~~~~~~~~- 546 (852)
.|.... .+....+|-...+||..+...+.... ..+.+++.+... .+...+.+|..++..+......|+.
T Consensus 87 ~L~~~l-~~~~~~~r~~~~~~L~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~al~~l~~l~~~~g~~ 165 (1207)
T d1u6gc_ 87 TLCTNM-LSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGL 165 (1207)
T ss_dssp HHHHHT-TCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSS
T ss_pred HHHHHh-cCCchhhhHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHhhHh
Confidence 776554 36677788888889888776654321 222333433333 4566678899999888877777662
Q ss_pred -HHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHh
Q psy3914 547 -SEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLE 584 (852)
Q Consensus 547 -~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le 584 (852)
......+++.|.+.+.|++..||..|..+|..++..+.
T Consensus 166 l~~~~~~il~~l~~~l~~~~~~vR~~A~~~l~~l~~~~~ 204 (1207)
T d1u6gc_ 166 LVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCG 204 (1207)
T ss_dssp CTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC-
T ss_pred hHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHCC
Confidence 23346788999999999999999999998877765444
|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.62 E-value=0.00018 Score=77.10 Aligned_cols=229 Identities=10% Similarity=0.117 Sum_probs=156.6
Q ss_pred CcccccccchhhhHhhhhcCCCc--ccchhhhhhhcccCCh---hhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHcc
Q psy3914 351 PKLISCHKVLPQLINAFEYGEAG--ASVLSPLFKIGQMLEH---EDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGH 425 (852)
Q Consensus 351 P~~~~~~kiLP~Ll~~~e~~~~~--~~vL~~llki~~~l~~---~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~ 425 (852)
+.......++|.|...+...+.. ..++..+-.++..-.. .-+...++|.++.++...+..++...+.-+..++..
T Consensus 181 ~~~~~~~~~l~~l~~ll~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~~~~~~~~~al~~l~~l~~~ 260 (434)
T d1q1sc_ 181 PPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTG 260 (434)
T ss_dssp CCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTS
T ss_pred chhhhhhhHHHHHHHHHhccccchhhhHHhhhcccchhhhhhHHHHhhcccchhcccccccchhhhhhchhhhhhhHHhh
Confidence 33334556777777665544321 1122222223222111 112346789999999999999887777777766643
Q ss_pred CC---hHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc---cchhhhHHHHHHHHhccCCCcceeeehhhhhc
Q psy3914 426 VP---DAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNY---NNLNVETLRHFARLQAKDDQGGIRTNTTVCVG 499 (852)
Q Consensus 426 l~---~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~---~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclg 499 (852)
-+ ...+...+++.++..+.+.++.||+.++..+..++..-.. ..++..+++.+..+. .+.+..||.+++.+|+
T Consensus 261 ~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~li~~l-~~~~~~v~~~a~~~l~ 339 (434)
T d1q1sc_ 261 TDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVL-SKADFKTQKEAAWAIT 339 (434)
T ss_dssp CHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHH-HSSCHHHHHHHHHHHH
T ss_pred hhHHHHHHHhccccchHHHhhcccchhhhHHHHHHHhhhccccchhHHHHhhhhhHHHHHHHH-hccChHHHHHHHHHHH
Confidence 32 3455677889999999999999999999999888753221 123445677777776 4778999999999999
Q ss_pred ccccccChhhHHHH----HHHHHHhhccCCChHHHHHHHHHHHHHhhc---cC-HHHHHH-----hHhhhhhhcccCCCh
Q psy3914 500 KIAHHLHPQIRQKV----LISAFSRAMRDPFPPARNAGVLALAATQQY---FL-LSEVAQ-----RILPALCQLSTDPEK 566 (852)
Q Consensus 500 kia~~L~~~~~~~v----Li~af~r~lkDp~~~~R~a~l~~l~~~~~~---~~-~~~~a~-----~ILP~L~~l~~D~~~ 566 (852)
.++.+-+.+..... +++++...+.++....+.+++.++..+.++ .. .+.+.. .++..|-.+.-+++.
T Consensus 340 nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~d~~~~~~~l~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~n~ 419 (434)
T d1q1sc_ 340 NYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENE 419 (434)
T ss_dssp HHHHHSCHHHHHHHHHTTCHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTSHHHHHHHHTCSSH
T ss_pred HHHhcCCHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHcCCHHHHHHHHcCCCH
Confidence 99988776644433 378899999999899999998887655443 22 222322 247777778888899
Q ss_pred hhHHHHHHHHHHHH
Q psy3914 567 SVRDSAFKTIKGFL 580 (852)
Q Consensus 567 ~Vr~~a~~~i~~~l 580 (852)
.|+..|.+.|..|.
T Consensus 420 ~i~~~a~~il~~~f 433 (434)
T d1q1sc_ 420 SVYKASLNLIEKYF 433 (434)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998773
|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.55 E-value=0.00013 Score=77.96 Aligned_cols=129 Identities=12% Similarity=0.080 Sum_probs=93.9
Q ss_pred HhHhHHHHHHhhcC-------CCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhccccc
Q psy3914 431 VNEQIFQQVALGFL-------DTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAH 503 (852)
Q Consensus 431 v~~~I~P~l~~g~~-------D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~ 503 (852)
....++|.+..... |....+|..+...+..++..+.... -..+++.+.... .+++|.+|..++.+||.|+.
T Consensus 317 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~-~~~l~~~i~~~l-~s~~~~~r~aal~~l~~i~~ 394 (458)
T d1ibrb_ 317 ALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDI-VPHVLPFIKEHI-KNPDWRYRDAAVMAFGCILE 394 (458)
T ss_dssp HHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTTTH-HHHHHHHHHHHT-TCSSHHHHHHHHHHHHHTSS
T ss_pred HHHHHhhhHHhhhhcchhhhccccccHHHHHHHHHHHHHHhccHhh-hhHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHH
Confidence 34456666665543 4455789998888888888887665 456888887776 58899999999999999998
Q ss_pred ccChhh---HHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcc
Q psy3914 504 HLHPQI---RQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLS 561 (852)
Q Consensus 504 ~L~~~~---~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~ 561 (852)
...+.. .-..++|.+...++||.+.+|.+|+.++..+.+++.....-..+||.+...+
T Consensus 395 ~~~~~~~~~~l~~i~~~l~~~l~d~~~~VR~~a~~~l~~i~~~~~~~~~~~~~l~~ll~~l 455 (458)
T d1ibrb_ 395 GPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCL 455 (458)
T ss_dssp SSCTTTTCTTTTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHGGGGCCSTTTHHHHHHHH
T ss_pred hcCHhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHH
Confidence 765432 2345788899999999999999999999888777653332233444444443
|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.54 E-value=0.00033 Score=80.91 Aligned_cols=199 Identities=13% Similarity=0.133 Sum_probs=146.5
Q ss_pred ChhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCChH---HHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhccc
Q psy3914 388 EHEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDA---IVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPK 464 (852)
Q Consensus 388 ~~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~---~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~k 464 (852)
....+...+++.+...+..++..+|...++.|..++...... .+.+-+.+.+..++.+.++.+|..++..+..++..
T Consensus 217 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~v~~~~~~~l~~l~~~ 296 (861)
T d2bpta1 217 EREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEE 296 (861)
T ss_dssp TSHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHGGGCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHH
T ss_pred HhhhhhhHHHHhHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 344556778888888899999999988888888777665532 34445667778888999999999988776655332
Q ss_pred CC-------------cc--c----hhhhHHHHHHHHhc------cCCCcceeeehhhhhcccccccChhhHHHHHHHHHH
Q psy3914 465 LN-------------YN--N----LNVETLRHFARLQA------KDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFS 519 (852)
Q Consensus 465 l~-------------~~--~----l~~~lL~~l~kl~~------~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~ 519 (852)
.. .. . .-.++++.+..... .|.++.+|.....|+..++..++.... ..+.+.+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~ 375 (861)
T d2bpta1 297 EIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHIL-EPVLEFVE 375 (861)
T ss_dssp HHHHHHHHHHCTTCSCCCCCHHHHHHHHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHGGGGH-HHHHHHHH
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHhhcchhhh-hhhcchhh
Confidence 10 00 0 01223444433322 235677899999999999998886643 34455566
Q ss_pred hhccCCChHHHHHHHHHHHHHhhccCHH---HHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhhhc
Q psy3914 520 RAMRDPFPPARNAGVLALAATQQYFLLS---EVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQVS 587 (852)
Q Consensus 520 r~lkDp~~~~R~a~l~~l~~~~~~~~~~---~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~~~ 587 (852)
..+.++....|.+++.++.++....+.. .....++|.|..++.|++..||..++.++..+...+....
T Consensus 376 ~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~l~~~l~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~ 446 (861)
T d2bpta1 376 QNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESI 446 (861)
T ss_dssp HHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGS
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhcCcchhhhhHHHHHHHHHHHHhchhh
Confidence 7788999999999999999988877654 4567899999999999999999999999999988877553
|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin beta2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.46 E-value=5.9e-05 Score=89.77 Aligned_cols=136 Identities=13% Similarity=0.113 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhH--HHHHHHHHHhhccCC
Q psy3914 448 PTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIR--QKVLISAFSRAMRDP 525 (852)
Q Consensus 448 ~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~--~~vLi~af~r~lkDp 525 (852)
..+|..+...+-.++..+.+.. -..+++.+.... .+++|.+|-.++.|||.|+........ -..+++.+...++|+
T Consensus 371 ~~~r~~a~~~L~~l~~~~~~~i-l~~~l~~l~~~l-~s~~~~~reaa~~alg~i~eg~~~~~~~~l~~li~~l~~~l~d~ 448 (888)
T d1qbkb_ 371 WNLRKCSAAALDVLANVYRDEL-LPHILPLLKELL-FHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDK 448 (888)
T ss_dssp CSSHHHHHHHSTTTTTTCCSSS-HHHHHHHHHHTT-TSSSHHHHHHHHHHHHHHTTTSHHHHTTTHHHHHHHHHHHTTSS
T ss_pred hhHHHHHHHHHhhHhhhhHHHH-HHHHHHHHHHhh-ccchhHHHHHHHHHhhhhhhhHHHHhcccchhhhHHHHHhccCC
Confidence 3467777777777777666554 356788887776 588999999999999999886554332 234678888899999
Q ss_pred ChHHHHHHHHHHHHHhhccC---HHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhh
Q psy3914 526 FPPARNAGVLALAATQQYFL---LSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQ 585 (852)
Q Consensus 526 ~~~~R~a~l~~l~~~~~~~~---~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~ 585 (852)
.+.+|.+++.++..+..++. .+.....++|.|...+.|+++.||..|..+|..|.+....
T Consensus 449 ~~~Vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~l~d~~~~V~~~a~~al~~l~~~~~~ 511 (888)
T d1qbkb_ 449 KALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACT 511 (888)
T ss_dssp CHHHHHHHHHHHHHTHHHHHSSCHHHHTTTHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhh
Confidence 99999999988876655432 3445677899999999999999999999999988876654
|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin alpha species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.37 E-value=0.00093 Score=73.42 Aligned_cols=252 Identities=12% Similarity=0.143 Sum_probs=168.1
Q ss_pred hhccCHHHHhHHHHhhhhhhc--cCCc--ccccccchhhhHhhhhcCCCc---ccchhhhhhhcccCCh---hhhhcchh
Q psy3914 328 IQMKDKIDKNKFFNGLASAID--KFPK--LISCHKVLPQLINAFEYGEAG---ASVLSPLFKIGQMLEH---EDYQAKIV 397 (852)
Q Consensus 328 l~~k~~~eK~~Ff~~L~~~l~--~fP~--~~~~~kiLP~Ll~~~e~~~~~---~~vL~~llki~~~l~~---~ef~~~i~ 397 (852)
+...+...+..-+..+.+.+. .-|+ .+...-++|.|+..+...... ..++..+..|+..-+. .-...-++
T Consensus 85 ~~s~~~~~~~~a~~~~r~~ls~~~~~~i~~ii~~g~i~~Lv~~l~~~~~~~iq~~a~~~L~ni~~~~~~~~~~~~~~g~i 164 (503)
T d1wa5b_ 85 LNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAV 164 (503)
T ss_dssp HSCSSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCH
T ss_pred hcCCCHHHHHHHHHHHHHHHhcCCCchHHHHHHCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHhCCCh
Confidence 333444455555555555442 2222 344566899998887653321 1122233334432221 11134568
Q ss_pred hhhhhccccCCHHHHHHHHHHHHHHHccCC---hHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCc---cchh
Q psy3914 398 PCVVKLFGSNDRATRSRLLLQLEHFIGHVP---DAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNY---NNLN 471 (852)
Q Consensus 398 P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~---~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~---~~l~ 471 (852)
|.+..+..+.+..++...+.-|..++..-+ ...+...++|.|+..+.+..+.++..++..+..++..-.. ...-
T Consensus 165 ~~l~~lL~s~~~~i~~~a~~~L~nia~~~~~~r~~l~~~~~~~~L~~ll~~~~~~~~~~~~~~l~nl~~~~~~~~~~~~~ 244 (503)
T d1wa5b_ 165 PLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVV 244 (503)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCCHHHH
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHhhhhHHHHHHHHhhcccccchhhcccCCHHHHHHHHHHHHHHhcCCccchHHHHH
Confidence 999999999999888777776666654322 2334556789999999999999999999988888754322 1223
Q ss_pred hhHHHHHHHHhccCCCcceeeehhhhhcccccccChh---hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCH--
Q psy3914 472 VETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ---IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLL-- 546 (852)
Q Consensus 472 ~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~---~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~-- 546 (852)
..+++.+.++. ...+..++.+++.||+.++..-... ....-+++.+...++.+...++..++.++..+....+.
T Consensus 245 ~~~l~~l~~~l-~~~d~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~al~~l~nl~~~~~~~~ 323 (503)
T d1wa5b_ 245 SQALPTLAKLI-YSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQT 323 (503)
T ss_dssp GGGHHHHHHHT-TCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred HHHHHHHHHHh-ccccHHHHHHHHHHHHhhccCCchhhhhhhhhhhhhhhhhcccCCchhhhhhHHHHHHHHHHHHHHHH
Confidence 45788888876 4677889999999999998753321 22233567788889999999999999988776654332
Q ss_pred -HHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHH
Q psy3914 547 -SEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFL 580 (852)
Q Consensus 547 -~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l 580 (852)
..+-..++|.|..++-+++..||..++.+|..++
T Consensus 324 ~~~~~~~~l~~l~~ll~~~~~~i~~~~~~~l~nl~ 358 (503)
T d1wa5b_ 324 QVVINAGVLPALRLLLSSPKENIKKEACWTISNIT 358 (503)
T ss_dssp HHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHT
T ss_pred HhhhccchHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 1233468999999999999999998888887664
|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin alpha species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.34 E-value=0.00057 Score=75.22 Aligned_cols=193 Identities=12% Similarity=0.155 Sum_probs=143.2
Q ss_pred hhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCCh---HHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCC
Q psy3914 390 EDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPD---AIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLN 466 (852)
Q Consensus 390 ~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~---~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~ 466 (852)
......++|.+..++...|..++...+.-|..++..-.. ..+...++|.++..+...++.++..+++.+-.++..-+
T Consensus 241 ~~~~~~~l~~l~~~l~~~d~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~al~~l~nl~~~~~ 320 (503)
T d1wa5b_ 241 WSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGND 320 (503)
T ss_dssp HHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCH
T ss_pred HHHHHHHHHHHHHHhccccHHHHHHHHHHHHhhccCCchhhhhhhhhhhhhhhhhcccCCchhhhhhHHHHHHHHHHHHH
Confidence 345667899999999999999888777777777765432 34566789999999999999999999999988875433
Q ss_pred c---cchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhh----HHHHHHHHHHhhccCCChHHHHHHHHHHHH
Q psy3914 467 Y---NNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQI----RQKVLISAFSRAMRDPFPPARNAGVLALAA 539 (852)
Q Consensus 467 ~---~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~----~~~vLi~af~r~lkDp~~~~R~a~l~~l~~ 539 (852)
. ..++..+++.+..+. ......||..++.||+.|+.. ++.. ...-+++.+...+..+...+|..++.++..
T Consensus 321 ~~~~~~~~~~~l~~l~~ll-~~~~~~i~~~~~~~l~nl~~~-~~~~~~~i~~~~~l~~li~~l~~~~~~v~~~a~~~l~n 398 (503)
T d1wa5b_ 321 LQTQVVINAGVLPALRLLL-SSPKENIKKEACWTISNITAG-NTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISN 398 (503)
T ss_dssp HHHHHHHHTTHHHHHHHHT-TCSCHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHhhhccchHHHHHHHh-cCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHHccccchhHHhcccCChhHHHHHHHHHHH
Confidence 2 123455788888887 577889999999999999764 3322 233456788888888889999999998876
Q ss_pred HhhccC--HH---H-HHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHh
Q psy3914 540 TQQYFL--LS---E-VAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLE 584 (852)
Q Consensus 540 ~~~~~~--~~---~-~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le 584 (852)
+..... .+ . +-..+++.|+.++-..+..+...+..+|..++...+
T Consensus 399 l~~~~~~~~~~~~~l~~~~~l~~l~~~L~~~d~~~~~~~L~~l~~ll~~~~ 449 (503)
T d1wa5b_ 399 ASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGE 449 (503)
T ss_dssp HHHHTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcccccHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 554332 12 2 335588999999887777777777777777765444
|
| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HspBP1 domain domain: Hsp70-binding protein 1 (HspBP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.27 E-value=0.00042 Score=70.12 Aligned_cols=177 Identities=13% Similarity=0.115 Sum_probs=127.4
Q ss_pred ccCCHHHHHHHHHHHHHHHccCChHHHhHh--HHH-HHHhhcCCCcHHHHHHHHHHHHHhcccCCc---cchhhhHHHHH
Q psy3914 405 GSNDRATRSRLLLQLEHFIGHVPDAIVNEQ--IFQ-QVALGFLDTNPTIREQTVKSIIHLAPKLNY---NNLNVETLRHF 478 (852)
Q Consensus 405 ~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~--I~P-~l~~g~~D~~~~iRe~tlksi~~l~~kl~~---~~l~~~lL~~l 478 (852)
...|...|...|+.|..+++..+....... -+| .+...+.+.++.||..++..+-.++..-.. ..+....++.|
T Consensus 27 ~~~~~~~~~~Al~~L~~L~~~~d~a~~l~~~gg~~~ll~~ll~s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~~~i~~L 106 (264)
T d1xqra1 27 QAADQQEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKL 106 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHcCHHHHHHHHHcCCHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH
Confidence 345667777788888888765442221111 244 445677889999999999999988854322 22345568888
Q ss_pred HHHhccCCCcceeeehhhhhcccccccChh---hHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccC--HHH-HHHh
Q psy3914 479 ARLQAKDDQGGIRTNTTVCVGKIAHHLHPQ---IRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFL--LSE-VAQR 552 (852)
Q Consensus 479 ~kl~~~D~~~~IR~nt~iclgkia~~L~~~---~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~--~~~-~a~~ 552 (852)
.++...+..+.+|.+++.+|+.++.+-... ....-.++++.+.++++....+..++.++..+..... ... +...
T Consensus 107 v~lL~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~ 186 (264)
T d1xqra1 107 LRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMG 186 (264)
T ss_dssp HHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTT
T ss_pred HHHhhcCCCHHHHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHhcCchHHHHHHHHHHHHHHhccHHHHHHHHHhh
Confidence 887766788999999999999998776542 2233347888899999999999888888876554432 222 3345
Q ss_pred HhhhhhhcccCCChhhHHHHHHHHHHHHH
Q psy3914 553 ILPALCQLSTDPEKSVRDSAFKTIKGFLG 581 (852)
Q Consensus 553 ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~ 581 (852)
++|.|+.++.+++..||..+..++..+..
T Consensus 187 ~v~~L~~lL~~~~~~~~~~a~~aL~~L~~ 215 (264)
T d1xqra1 187 MVQQLVALVRTEHSPFHEHVLGALCSLVT 215 (264)
T ss_dssp HHHHHHHHHTSCCSTHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 89999999999999999999988887653
|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.26 E-value=0.0011 Score=76.86 Aligned_cols=190 Identities=11% Similarity=0.092 Sum_probs=127.3
Q ss_pred chhhhhhhccccCC--HHHHHHHHHHHHHHHccCChHHHh---HhHHHHHHhhcCC--CcHHHHHHHHHHHHHhcccCCc
Q psy3914 395 KIVPCVVKLFGSND--RATRSRLLLQLEHFIGHVPDAIVN---EQIFQQVALGFLD--TNPTIREQTVKSIIHLAPKLNY 467 (852)
Q Consensus 395 ~i~P~i~~LF~~~d--r~iR~~LL~~L~~~~~~l~~~~v~---~~I~P~l~~g~~D--~~~~iRe~tlksi~~l~~kl~~ 467 (852)
.++|.|...+.+++ ..+|...|.-|..+.+.+..+.+. +.|+|.++.++.+ .+..+|..+++++..+...+..
T Consensus 128 eli~~L~~~l~~~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~il~~i~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~ 207 (876)
T d1qgra_ 128 ELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKA 207 (876)
T ss_dssp THHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHHHHHhhh
Confidence 47888888887766 456766677777777777665443 5689999999964 4578999999998877766553
Q ss_pred c----chhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhh---HHHHHHHHHHhhccCCChHHHHHHHHHHHHH
Q psy3914 468 N----NLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQI---RQKVLISAFSRAMRDPFPPARNAGVLALAAT 540 (852)
Q Consensus 468 ~----~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~---~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~ 540 (852)
. .....+++.+.... .++++.||.+++.||.+|+....... ....+.+.+...+++.....+..++..+...
T Consensus 208 ~~~~~~~~~~i~~~l~~~~-~~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i 286 (876)
T d1qgra_ 208 NFDKESERHFIMQVVCEAT-QCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNV 286 (876)
T ss_dssp HHTSHHHHHHHHHHHHHHT-TCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 3 33344666666554 58889999999999999988765432 2344556666778888888887777644332
Q ss_pred hhc-----------------------cCHHHHHHhHhhhhhhcccC-------CChhhHHHHHHHHHHHHHHHhh
Q psy3914 541 QQY-----------------------FLLSEVAQRILPALCQLSTD-------PEKSVRDSAFKTIKGFLGKLEQ 585 (852)
Q Consensus 541 ~~~-----------------------~~~~~~a~~ILP~L~~l~~D-------~~~~Vr~~a~~~i~~~l~~le~ 585 (852)
+.. +-.......++|.+...+.+ ....+|..|..++..+......
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~ 361 (876)
T d1qgra_ 287 CDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCED 361 (876)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHhhHHHHhhhhHHHHHHHHHHHHHHHHHHhhHHHHHhcccccccccchHHHHHHHHHHHHHHHhhh
Confidence 211 01233455666766665543 3456888887777666555543
|
| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: MTH187 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.06 E-value=0.0004 Score=60.63 Aligned_cols=87 Identities=17% Similarity=0.203 Sum_probs=69.5
Q ss_pred HHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHH
Q psy3914 435 IFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVL 514 (852)
Q Consensus 435 I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vL 514 (852)
.++.|+.++.|.++.||..++..+-.+. ....++.|.++. +|+++.||.+++.+||+|.. .-.
T Consensus 23 ~~~~L~~~l~d~~~~vR~~a~~~L~~~~--------~~~~~~~L~~~l-~d~~~~VR~~a~~aL~~i~~--------~~~ 85 (111)
T d1te4a_ 23 AFEPLLESLSNEDWRIRGAAAWIIGNFQ--------DERAVEPLIKLL-EDDSGFVRSGAARSLEQIGG--------ERV 85 (111)
T ss_dssp THHHHHHGGGCSCHHHHHHHHHHHGGGC--------SHHHHHHHHHHH-HHCCTHHHHHHHHHHHHHCS--------HHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcc--------hhhhHHHHHhhh-ccchhHHHHHHHHHHHHhCc--------cch
Confidence 4567788999999999999998875432 245677777776 59999999999999998853 234
Q ss_pred HHHHHhhccCCChHHHHHHHHHHH
Q psy3914 515 ISAFSRAMRDPFPPARNAGVLALA 538 (852)
Q Consensus 515 i~af~r~lkDp~~~~R~a~l~~l~ 538 (852)
++.+...++|+...+|.+|+.+|.
T Consensus 86 ~~~L~~ll~d~~~~vr~~A~~aL~ 109 (111)
T d1te4a_ 86 RAAMEKLAETGTGFARKVAVNYLE 109 (111)
T ss_dssp HHHHHHHTTSCCTHHHHHHHHHGG
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHH
Confidence 667778899999999999988763
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.06 E-value=0.00088 Score=72.19 Aligned_cols=72 Identities=10% Similarity=-0.070 Sum_probs=46.1
Q ss_pred eccccCCCCCCcccCCceEEEEEEEcCCCeEEEEEEEeC---------CCchHHHHHHHHHHHhCC-C--CCcceEeeeE
Q psy3914 59 GEPAVSFSGCFTQKHTFWKFHGGKKKGSNEKVTIFLNDS---------ADTYEPALSYVKKLKTLR-H--PSILTFLDSV 126 (852)
Q Consensus 59 ~e~Ig~~~g~~~~~Gs~~~Vy~a~~k~~g~~VaVKv~~~---------~~~~~~~~~E~~~Lk~Lr-H--PnIlk~~d~~ 126 (852)
.+.|| .|..-.||+.+...+++.|.||.-.. .........|+..|+.+. + ..+.+++.+.
T Consensus 31 ~~eig--------~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d 102 (392)
T d2pula1 31 CQEIG--------DGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD 102 (392)
T ss_dssp EEECC--------SSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE
T ss_pred EEEeC--------CCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc
Confidence 44678 78889999998877788899986543 123345667888777663 2 3466666553
Q ss_pred EcCCCCeEEEEEeecc
Q psy3914 127 ESPSKSLVYLAVEYVE 142 (852)
Q Consensus 127 e~~~~~~~yIVtE~v~ 142 (852)
. ...++|||++.
T Consensus 103 ~----~~~~lvmE~L~ 114 (392)
T d2pula1 103 T----EMAVTVMEDLS 114 (392)
T ss_dssp T----TTTEEEECCCT
T ss_pred C----CCCEEEEeccC
Confidence 3 33578999987
|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.99 E-value=0.0085 Score=68.63 Aligned_cols=192 Identities=11% Similarity=0.181 Sum_probs=127.9
Q ss_pred chhhhhhhcccc--CCHHHHHHHHHHHHHHHccCChHHH------hHhHHHHHHhhcCCCc-----------HHHHHHHH
Q psy3914 395 KIVPCVVKLFGS--NDRATRSRLLLQLEHFIGHVPDAIV------NEQIFQQVALGFLDTN-----------PTIREQTV 455 (852)
Q Consensus 395 ~i~P~i~~LF~~--~dr~iR~~LL~~L~~~~~~l~~~~v------~~~I~P~l~~g~~D~~-----------~~iRe~tl 455 (852)
.++..+..+... .+..+|..++.-+..++........ ...+.+.+...+.... ..++..++
T Consensus 498 ~~~~~l~~~~~~~~~~~~~~~~~~~al~~~i~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~ 577 (861)
T d2bpta1 498 ALVDGLIGAANRIDNEFNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNIL 577 (861)
T ss_dssp HHHHHHHHHHTCSCCGGGHHHHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhHHHHHHHHHH
Confidence 334444444332 3456787888888888888775432 2223333333332221 12344444
Q ss_pred HHHHHhcccCCcc--chhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHH--HHHHHHHHhhccCCChHHHH
Q psy3914 456 KSIIHLAPKLNYN--NLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQ--KVLISAFSRAMRDPFPPARN 531 (852)
Q Consensus 456 ksi~~l~~kl~~~--~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~--~vLi~af~r~lkDp~~~~R~ 531 (852)
..+..++.++... ..-..++..+.+....+....||..++.+++.++..++.+... ..++|.+...+.|....+|.
T Consensus 578 ~~l~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~v~~~~l~~l~~l~~~~~~~~~~~l~~i~p~l~~~l~~~~~~v~~ 657 (861)
T d2bpta1 578 TVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSI 657 (861)
T ss_dssp HHHHHHHHHCGGGTGGGHHHHHHHHHHHHHSTTGGGTHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHHCTTSHHHH
T ss_pred HHHHHHHhcchhhHHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHhCCCCHHHHH
Confidence 4455555554432 2235567777766656677889999999999999998876432 45788889999999999999
Q ss_pred HHHHHHHHHhhccC--HHHHHHhHhhhhhhcccCCC--hhhHHHHHHHHHHHHHHHhhh
Q psy3914 532 AGVLALAATQQYFL--LSEVAQRILPALCQLSTDPE--KSVRDSAFKTIKGFLGKLEQV 586 (852)
Q Consensus 532 a~l~~l~~~~~~~~--~~~~a~~ILP~L~~l~~D~~--~~Vr~~a~~~i~~~l~~le~~ 586 (852)
+++..+..+...++ ....+..|++.|...+-+++ ..||..++.+|..++..+...
T Consensus 658 ~a~~~l~~i~~~~~~~~~~~~~~i~~~L~~~l~~~~~~~~~k~~~~~~l~~i~~~~~~~ 716 (861)
T d2bpta1 658 TAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGAD 716 (861)
T ss_dssp HHHHHHHHHHHHTGGGGHHHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhHHHhHhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99988877666554 34567788898888887764 578999999999888887654
|
| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: Hypothetical protein YibA species: Escherichia coli [TaxId: 562]
Probab=96.97 E-value=0.0013 Score=65.47 Aligned_cols=130 Identities=14% Similarity=0.027 Sum_probs=97.0
Q ss_pred HHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHH
Q psy3914 436 FQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLI 515 (852)
Q Consensus 436 ~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi 515 (852)
...|+..+.|.++.||..++..+..+. ..+.++.+.++. +|+++.||..++..|+++...-.. -..++.
T Consensus 21 ~~~L~~~L~d~~~~vR~~A~~~L~~~~--------~~~~~~~l~~~l-~d~~~~vr~~a~~aL~~l~~~~~~--~~~~~~ 89 (276)
T d1oyza_ 21 DDELFRLLDDHNSLKRISSARVLQLRG--------GQDAVRLAIEFC-SDKNYIRRDIGAFILGQIKICKKC--EDNVFN 89 (276)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHC--------CHHHHHHHHHHH-TCSSHHHHHHHHHHHHHSCCCTTT--HHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHhhC--------CHhHHHHHHHHH-cCCCHHHHHHHHHHHHHhcccccc--ccchHH
Confidence 345678899999999999999887654 245678888776 699999999999999988654332 222222
Q ss_pred HHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHHH
Q psy3914 516 SAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKG 578 (852)
Q Consensus 516 ~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~ 578 (852)
..+...++|+...+|.+++.++..+...-. .....+++.+...+.|+...||..+...+..
T Consensus 90 ~l~~~~l~d~~~~vr~~a~~aL~~~~~~~~--~~~~~~~~~l~~~~~d~~~~vr~~a~~~l~~ 150 (276)
T d1oyza_ 90 ILNNMALNDKSACVRATAIESTAQRCKKNP--IYSPKIVEQSQITAFDKSTNVRRATAFAISV 150 (276)
T ss_dssp HHHHHHHHCSCHHHHHHHHHHHHHHHHHCG--GGHHHHHHHHHHHTTCSCHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHccccc--hhhHHHHHHHHHHhcCcchHHHHHHHHHHhh
Confidence 334456889999999999999876654322 2335688999999999999999877665543
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=96.86 E-value=0.0021 Score=63.86 Aligned_cols=65 Identities=12% Similarity=0.002 Sum_probs=46.0
Q ss_pred CceEEEEEEEcCCCeEEEEEEEeCCCchHHHHHHHHHHHhCCC--CCcceEeeeEEcCCCCeEEEEEeecc
Q psy3914 74 TFWKFHGGKKKGSNEKVTIFLNDSADTYEPALSYVKKLKTLRH--PSILTFLDSVESPSKSLVYLAVEYVE 142 (852)
Q Consensus 74 s~~~Vy~a~~k~~g~~VaVKv~~~~~~~~~~~~E~~~Lk~LrH--PnIlk~~d~~e~~~~~~~yIVtE~v~ 142 (852)
+...||+.... ++..+.+|.... .....+..|...|+.|.. -.+.+++.+..+. +..|+||+++.
T Consensus 23 s~~~v~r~~~~-~~~~~vlK~~~~-~~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~--~~~~~v~~~i~ 89 (255)
T d1nd4a_ 23 SDAAVFRLSAQ-GRPVLFVKTDLS-GALNELQDEAARLSWLATTGVPCAAVLDVVTEA--GRDWLLLGEVP 89 (255)
T ss_dssp SSCEEEEEECT-TSCCEEEEEECS-CTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECS--SCEEEEEECCS
T ss_pred cCCeEEEEEeC-CCCEEEEEeCCc-cCHhHHHHHHHHHHHHHhcCCCCCceeeecccc--cceEEEEEeee
Confidence 34678888763 566788887765 233456778887777642 3367778877776 78999999996
|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: beta-Catenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.58 E-value=0.0035 Score=68.96 Aligned_cols=219 Identities=13% Similarity=0.091 Sum_probs=141.9
Q ss_pred chhhhHhhhhcCCC---cccchhhhhhhcccCC--hhhhhcchhhhhhhccccCCHHHHHHHHHHHHHHHccCC---hHH
Q psy3914 359 VLPQLINAFEYGEA---GASVLSPLFKIGQMLE--HEDYQAKIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVP---DAI 430 (852)
Q Consensus 359 iLP~Ll~~~e~~~~---~~~vL~~llki~~~l~--~~ef~~~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~---~~~ 430 (852)
++|.|+..+...+. ...++..+..++..-. ..-+..-.+|.|+++....|..++...+.-|..+...-+ ...
T Consensus 60 ~v~~l~~~L~~~~~~~~~~~a~~~L~~l~~~~~~~~~i~~~g~i~~Li~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~ 139 (529)
T d1jdha_ 60 MVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAV 139 (529)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhHHHHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHhhcccchhhhHH
Confidence 56666666654332 1122333333332111 111234558999999999999988665555554443332 334
Q ss_pred HhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCcc---chhhhHHHHHHHHhccCCCcceeeehhhhhcccccccCh
Q psy3914 431 VNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYN---NLNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHP 507 (852)
Q Consensus 431 v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~---~l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~ 507 (852)
.....+|.|+..+.+.++.+|+.+...+..++..-.+. .+....++.+.++....+...++..++-++..++.. +
T Consensus 140 ~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~l~~ls~~--~ 217 (529)
T d1jdha_ 140 RLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVC--S 217 (529)
T ss_dssp HHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTS--T
T ss_pred HhcCCchHHHHHHHccChHHHHHHHHHHHHHhhhhhHHHHHHHhcccchHHHHHHHhhhhHHHHHHHHHHHhhhhcc--c
Confidence 46678999999999999999999999888776432211 122334566666554455567888888888888743 3
Q ss_pred hhHHH----HHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHH
Q psy3914 508 QIRQK----VLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGF 579 (852)
Q Consensus 508 ~~~~~----vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~ 579 (852)
+.+.. -.++.+.+.++++....+..++.++....+..........++|.|..++.+.+..++..|..++..+
T Consensus 218 ~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~l~~ls~~~~~~~~~~~~i~~Lv~ll~~~~~~~~~~a~~~L~~l 293 (529)
T d1jdha_ 218 SNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNL 293 (529)
T ss_dssp THHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred cccchhhhhhhhhhHHHHhcccchhhhhhhhhHHHhccccccchhhhhhcchhhhhhcccccHHHHHHHHHHHHhh
Confidence 33332 2467888899999888888888887765554443333456788888888888888888777766554
|
| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HspBP1 domain domain: Hsp70-binding protein 1 (HspBP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.27 E-value=0.0069 Score=60.68 Aligned_cols=146 Identities=12% Similarity=0.149 Sum_probs=107.7
Q ss_pred hhhhhhccccCCHHHHHHHHHHHHHHHccCC---hHHHhHhHHHHHHhhcC-CCcHHHHHHHHHHHHHhcccCCccc---
Q psy3914 397 VPCVVKLFGSNDRATRSRLLLQLEHFIGHVP---DAIVNEQIFQQVALGFL-DTNPTIREQTVKSIIHLAPKLNYNN--- 469 (852)
Q Consensus 397 ~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~---~~~v~~~I~P~l~~g~~-D~~~~iRe~tlksi~~l~~kl~~~~--- 469 (852)
.|.|..+..++++.+|...+.-|..+..+-+ ...+...++|.|+..+. +.++.+|+.++.++..++..-....
T Consensus 61 ~~ll~~ll~s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~ 140 (264)
T d1xqra1 61 HLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQF 140 (264)
T ss_dssp HHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHhhcCCCHHHHHHHHHHHHHHhccchhhHHHH
Confidence 3444566778899999877777777776543 34566788999999985 6789999999999988875544322
Q ss_pred hhhhHHHHHHHHhccCCCcceeeehhhhhcccccccChhhH----HHHHHHHHHhhccCCChHHHHHHHHHHHHHhhcc
Q psy3914 470 LNVETLRHFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIR----QKVLISAFSRAMRDPFPPARNAGVLALAATQQYF 544 (852)
Q Consensus 470 l~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~----~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~ 544 (852)
+....++.+.++. .+.+..++.+++-+|+.++.. ++..+ ..-.++.+...++++.+.+|..++.+|..+....
T Consensus 141 ~~~~gi~~L~~lL-~~~~~~~~~~a~~~L~~l~~~-~~~~~~~~~~~~~v~~L~~lL~~~~~~~~~~a~~aL~~L~~~~ 217 (264)
T d1xqra1 141 LRLDGFSVLMRAM-QQQVQKLKVKSAFLLQNLLVG-HPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTDF 217 (264)
T ss_dssp HHTTHHHHHHHHH-HSSCHHHHHHHHHHHHHHHHH-CGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHTTC
T ss_pred HHhhhhhHHHHHH-hcCchHHHHHHHHHHHHHHhc-cHHHHHHHHHhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC
Confidence 2344577787776 477888999999999998754 22222 2235789999999999999999999987665443
|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: beta-Catenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.01 E-value=0.012 Score=64.49 Aligned_cols=152 Identities=10% Similarity=0.047 Sum_probs=103.3
Q ss_pred ChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccc--h-hhhHHHHHHHHhccCCCcceeeehhhhhccccc
Q psy3914 427 PDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNN--L-NVETLRHFARLQAKDDQGGIRTNTTVCVGKIAH 503 (852)
Q Consensus 427 ~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~--l-~~~lL~~l~kl~~~D~~~~IR~nt~iclgkia~ 503 (852)
+...+....+|.|+..+.|.+..+|..+++.+-.++..-..+. + ...+++.+.++.....+..+|-+++-+|..|+.
T Consensus 10 ~~~~~~~~aip~L~~lL~~~~~~v~~~A~~~l~~l~~~~~~~~~~~~~~~~v~~l~~~L~~~~~~~~~~~a~~~L~~l~~ 89 (529)
T d1jdha_ 10 DDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSH 89 (529)
T ss_dssp -------CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccHHHHHHHHhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHhC
Confidence 3344555667888888888888888888888887764322111 1 134677777666445667788888888888864
Q ss_pred ccChhhHHHH----HHHHHHhhccCCChHHHHHHHHHHHHHhhccCH--H-HHHHhHhhhhhhcccCCChhhHHHHHHHH
Q psy3914 504 HLHPQIRQKV----LISAFSRAMRDPFPPARNAGVLALAATQQYFLL--S-EVAQRILPALCQLSTDPEKSVRDSAFKTI 576 (852)
Q Consensus 504 ~L~~~~~~~v----Li~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~--~-~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i 576 (852)
+.+.+..+ .+|.+++.|+++...++..++.+|......... . ......+|.|..++-+++..++..+..++
T Consensus 90 --~~~~~~~i~~~g~i~~Li~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~a~~~L 167 (529)
T d1jdha_ 90 --HREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCL 167 (529)
T ss_dssp --SHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHH
T ss_pred --CchhHHHHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHhhcccchhhhHHHhcCCchHHHHHHHccChHHHHHHHHHH
Confidence 34444433 378899999999999999999888755443332 2 23466889999999999999998888777
Q ss_pred HHHH
Q psy3914 577 KGFL 580 (852)
Q Consensus 577 ~~~l 580 (852)
..+.
T Consensus 168 ~~l~ 171 (529)
T d1jdha_ 168 QILA 171 (529)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6654
|
| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Leucine-rich repeat variant domain: Leucine-rich repeat variant species: Azotobacter vinelandii [TaxId: 354]
Probab=95.43 E-value=0.0037 Score=62.29 Aligned_cols=117 Identities=23% Similarity=0.235 Sum_probs=65.7
Q ss_pred hhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHH
Q psy3914 398 PCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRH 477 (852)
Q Consensus 398 P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~ 477 (852)
+.+..|...+++.||..+..+| +. +.|...+.|.++.||....+.+. ..+|.
T Consensus 93 ~~L~~L~~D~d~~VR~~aa~~l-------~~--------~~L~~Ll~D~d~~VR~~aa~~~~------------~~~L~- 144 (233)
T d1lrva_ 93 EQLSALMFDEDREVRITVADRL-------PL--------EQLEQMAADRDYLVRAYVVQRIP------------PGRLF- 144 (233)
T ss_dssp GGGGGTTTCSCHHHHHHHHHHS-------CT--------GGGGGGTTCSSHHHHHHHHHHSC------------GGGGG-
T ss_pred HHHHHHhcCCChhHHHHHHhcc-------CH--------HHHHHHhcCCCHHHHHHHHhccc------------hhHHH-
Confidence 4455556666666665554442 21 22334455666666666655421 11111
Q ss_pred HHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhh
Q psy3914 478 FARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPAL 557 (852)
Q Consensus 478 l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L 557 (852)
.+. +|+++.||..++.-++ .+.+.++++|+...+|.+++..+. -|.|
T Consensus 145 --~L~-~D~d~~VR~~aA~~~~---------------~~~L~~l~~D~d~~VR~~aa~~L~---------------~~~L 191 (233)
T d1lrva_ 145 --RFM-RDEDRQVRKLVAKRLP---------------EESLGLMTQDPEPEVRRIVASRLR---------------GDDL 191 (233)
T ss_dssp --GTT-TCSCHHHHHHHHHHSC---------------GGGGGGSTTCSSHHHHHHHHHHCC---------------GGGG
T ss_pred --HHh-cCCCHHHHHHHHHhcC---------------HHHHHHHccCCCHHHHHHHHHhcC---------------cHHH
Confidence 222 4666666665543221 133456678888888877765542 2677
Q ss_pred hhcccCCChhhHHHHHHH
Q psy3914 558 CQLSTDPEKSVRDSAFKT 575 (852)
Q Consensus 558 ~~l~~D~~~~Vr~~a~~~ 575 (852)
..++-|++..||..+.+.
T Consensus 192 ~~l~~D~d~~VR~aaae~ 209 (233)
T d1lrva_ 192 LELLHDPDWTVRLAAVEH 209 (233)
T ss_dssp GGGGGCSSHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHh
Confidence 788888888888776553
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.26 E-value=0.033 Score=59.23 Aligned_cols=65 Identities=9% Similarity=-0.082 Sum_probs=44.4
Q ss_pred cCCceEEEEEEEcC-------CCeEEEEEEEeCCCchHHHHHHHHHHHhCC-CCCcceEeeeEEcCCCCeEEEEEeecc
Q psy3914 72 KHTFWKFHGGKKKG-------SNEKVTIFLNDSADTYEPALSYVKKLKTLR-HPSILTFLDSVESPSKSLVYLAVEYVE 142 (852)
Q Consensus 72 ~Gs~~~Vy~a~~k~-------~g~~VaVKv~~~~~~~~~~~~E~~~Lk~Lr-HPnIlk~~d~~e~~~~~~~yIVtE~v~ 142 (852)
.|-.-.+|.+.... ....|.++++-.........+|..+++.+. +.-..+++.++.+ .+|+||+.
T Consensus 52 GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~------g~I~efi~ 124 (395)
T d1nw1a_ 52 GGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSG------GRLEEYIP 124 (395)
T ss_dssp CCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT------EEEECCCC
T ss_pred CccccceEEEEeCCCCccccCCCCcEEEEecCCcchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC------ceEEEEec
Confidence 46677889887653 245677888765444556778998888885 4445677777642 46788876
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=94.49 E-value=0.079 Score=54.56 Aligned_cols=64 Identities=8% Similarity=0.029 Sum_probs=42.0
Q ss_pred eEEEEEEEcCCCeEEEEEEEeC-CCchHHHHHHHHHHHhCCCCCc-----ceEe--eeEEcCCCCeEEEEEeecc
Q psy3914 76 WKFHGGKKKGSNEKVTIFLNDS-ADTYEPALSYVKKLKTLRHPSI-----LTFL--DSVESPSKSLVYLAVEYVE 142 (852)
Q Consensus 76 ~~Vy~a~~k~~g~~VaVKv~~~-~~~~~~~~~E~~~Lk~LrHPnI-----lk~~--d~~e~~~~~~~yIVtE~v~ 142 (852)
-.||+++. .+|..|++|+... ....+.+..|+..+..|..-+| +..- ..++.+ ...+.+++++.
T Consensus 36 N~vy~v~~-~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~--~~~~~l~~~~~ 107 (325)
T d1zyla1 36 NRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQ--GFYFAVFPSVG 107 (325)
T ss_dssp SEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEET--TEEEEEEECCC
T ss_pred ceeEEEEc-CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeee--eEEEEEEeecC
Confidence 46888877 4788999999986 3356778889988887752221 1111 122333 66788888875
|
| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Leucine-rich repeat variant domain: Leucine-rich repeat variant species: Azotobacter vinelandii [TaxId: 354]
Probab=93.69 E-value=0.035 Score=54.84 Aligned_cols=116 Identities=14% Similarity=0.146 Sum_probs=83.2
Q ss_pred hhhhhhccccCCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHH
Q psy3914 397 VPCVVKLFGSNDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLR 476 (852)
Q Consensus 397 ~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~ 476 (852)
.+.+..|...+|..||....+++ +. +.+...+.|.++.||....+.+. . +
T Consensus 116 ~~~L~~Ll~D~d~~VR~~aa~~~-------~~--------~~L~~L~~D~d~~VR~~aA~~~~-------~--------~ 165 (233)
T d1lrva_ 116 LEQLEQMAADRDYLVRAYVVQRI-------PP--------GRLFRFMRDEDRQVRKLVAKRLP-------E--------E 165 (233)
T ss_dssp TGGGGGGTTCSSHHHHHHHHHHS-------CG--------GGGGGTTTCSCHHHHHHHHHHSC-------G--------G
T ss_pred HHHHHHHhcCCCHHHHHHHHhcc-------ch--------hHHHHHhcCCCHHHHHHHHHhcC-------H--------H
Confidence 67899999999999998887763 22 23456778999999998776431 1 2
Q ss_pred HHHHHhccCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhh
Q psy3914 477 HFARLQAKDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPA 556 (852)
Q Consensus 477 ~l~kl~~~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~ 556 (852)
.+.++. +|+++.||.+++--|+ . +.+..+++|+...+|.+++. ++.|.
T Consensus 166 ~L~~l~-~D~d~~VR~~aa~~L~-------~--------~~L~~l~~D~d~~VR~aaae----------------~~~~~ 213 (233)
T d1lrva_ 166 SLGLMT-QDPEPEVRRIVASRLR-------G--------DDLLELLHDPDWTVRLAAVE----------------HASLE 213 (233)
T ss_dssp GGGGST-TCSSHHHHHHHHHHCC-------G--------GGGGGGGGCSSHHHHHHHHH----------------HSCHH
T ss_pred HHHHHc-cCCCHHHHHHHHHhcC-------c--------HHHHHHHhCCCHHHHHHHHH----------------hccHH
Confidence 233343 6999999998876543 2 34566789999999988753 23344
Q ss_pred hhhcccCCChhhHHHHHH
Q psy3914 557 LCQLSTDPEKSVRDSAFK 574 (852)
Q Consensus 557 L~~l~~D~~~~Vr~~a~~ 574 (852)
+...+-|++..||..|.+
T Consensus 214 ll~~L~D~d~~VR~aA~~ 231 (233)
T d1lrva_ 214 ALRELDEPDPEVRLAIAG 231 (233)
T ss_dssp HHHHCCCCCHHHHHHHHC
T ss_pred HHHHhCCCCHHHHHHHHH
Confidence 556678999999987753
|
| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Plakophilin 1 helical region domain: Plakophilin 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.67 E-value=0.15 Score=52.43 Aligned_cols=66 Identities=11% Similarity=0.100 Sum_probs=33.8
Q ss_pred hhhhhhccccCCHHHHHHHHHHHHHHHccC---ChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhc
Q psy3914 397 VPCVVKLFGSNDRATRSRLLLQLEHFIGHV---PDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLA 462 (852)
Q Consensus 397 ~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l---~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~ 462 (852)
+|.++++..+.++.++......|..+...= -...+....+|.|+..+.+.++.+|+.++.++..|+
T Consensus 4 ip~lv~~L~~~~~~~~~~a~~~l~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~~L~ 72 (457)
T d1xm9a1 4 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLV 72 (457)
T ss_dssp HHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 455555555555555555555555554211 122233334555555555555555555555555554
|
| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Plakophilin 1 helical region domain: Plakophilin 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.60 E-value=0.17 Score=51.88 Aligned_cols=104 Identities=10% Similarity=0.068 Sum_probs=67.2
Q ss_pred chhhhHhhhhcCCCcc--cchhhhhhhcccCChhhhhc-----chhhhhhhccccCCHHHHHHHHHHHHHHHccCCh---
Q psy3914 359 VLPQLINAFEYGEAGA--SVLSPLFKIGQMLEHEDYQA-----KIVPCVVKLFGSNDRATRSRLLLQLEHFIGHVPD--- 428 (852)
Q Consensus 359 iLP~Ll~~~e~~~~~~--~vL~~llki~~~l~~~ef~~-----~i~P~i~~LF~~~dr~iR~~LL~~L~~~~~~l~~--- 428 (852)
.+|.|++.+..++.-- .....|-.++ ...++.+. -.+|.+++++.+.+..+|...+.-|..+...-+.
T Consensus 3 ~ip~lv~~L~~~~~~~~~~a~~~l~~l~--~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~ 80 (457)
T d1xm9a1 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTC--FQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 80 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHT--SSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHH
T ss_pred CHHHHHHHhCCCCHHHHHHHHHHHHHHH--cCCHHHHHHHHHCCcHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 4788888887665211 1122233333 22344433 4469999999999999998888888888754442
Q ss_pred HHHhHhHHHHHHhhcC-CCcHHHHHHHHHHHHHhccc
Q psy3914 429 AIVNEQIFQQVALGFL-DTNPTIREQTVKSIIHLAPK 464 (852)
Q Consensus 429 ~~v~~~I~P~l~~g~~-D~~~~iRe~tlksi~~l~~k 464 (852)
..+..-.+|.++..+. +.++.+|+.++..+..++..
T Consensus 81 ~i~~~g~v~~li~~l~~~~~~~~~~~a~~~l~~l~~~ 117 (457)
T d1xm9a1 81 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 117 (457)
T ss_dssp HHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTS
T ss_pred HHHHCCChHHHHHHHhccCcHHHHHHHHHHHHHHHhh
Confidence 2233334677777664 56788898888888887764
|
| >d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Exportin Cse1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.55 E-value=0.45 Score=54.98 Aligned_cols=192 Identities=10% Similarity=0.073 Sum_probs=119.9
Q ss_pred hcchhhhhhhcccc---CCHHHHHHHHHHHHHHHccCChHHHhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCcc-
Q psy3914 393 QAKIVPCVVKLFGS---NDRATRSRLLLQLEHFIGHVPDAIVNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYN- 468 (852)
Q Consensus 393 ~~~i~P~i~~LF~~---~dr~iR~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~- 468 (852)
...+.+.+.+.+.. +.+.+|...+.-+..|.+.+.++. ...+++.++..+.|.++.||..+..++-.++......
T Consensus 453 ~~~l~~~v~~~l~~~~~~~~~lr~~~~~~i~~~~~~~~~~~-~~~~~~~l~~~L~~~~~~V~~~a~~al~~~~~~~~~~~ 531 (959)
T d1wa5c_ 453 VDFFTKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQLTKAQ-LIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNT 531 (959)
T ss_dssp HHHHHHHTHHHHHCSSCSCHHHHHHHHHHHHHTGGGSCHHH-HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSS
T ss_pred HHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHhhccHHH-HHHHHHHHHHHhCCCchhHHHHHHHHHHHHHHhhcccc
Confidence 33344444454433 456788888888888999888765 4689999999999999999999999988887654432
Q ss_pred ---------chh---hhHHHHHHHHhc-cC---CCcceeeehhhhhcccccccChhh------HHHHHHHHHHhhccCCC
Q psy3914 469 ---------NLN---VETLRHFARLQA-KD---DQGGIRTNTTVCVGKIAHHLHPQI------RQKVLISAFSRAMRDPF 526 (852)
Q Consensus 469 ---------~l~---~~lL~~l~kl~~-~D---~~~~IR~nt~iclgkia~~L~~~~------~~~vLi~af~r~lkDp~ 526 (852)
.+. ..++..+..... .. .....+...+.|++.+...++... .-..|++.+.+..++|.
T Consensus 532 ~~~~~~~~~~l~p~l~~ll~~L~~~l~~~~~~~~~~~~~~~ll~~l~~ii~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~ 611 (959)
T d1wa5c_ 532 SPAFIFHKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLLAQFIEIVTIMAKNPS 611 (959)
T ss_dssp SCCBSSCGGGTTTTHHHHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHHTTTTGGGHHHHHHHHHHHHHHHTTSCC
T ss_pred cchhhccHHHHHhhHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 111 122222222221 11 111223345667777766665432 23455666667777776
Q ss_pred hHH-HHHHHHHHHHHhhccC---HHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHHHHHHhh
Q psy3914 527 PPA-RNAGVLALAATQQYFL---LSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGFLGKLEQ 585 (852)
Q Consensus 527 ~~~-R~a~l~~l~~~~~~~~---~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~l~~le~ 585 (852)
-+. +......+..+....+ ...+...++|.+...+..........++..+..++.....
T Consensus 612 ~~~~~~~~~e~l~~l~~~~~~~~~~~l~~~l~p~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 674 (959)
T d1wa5c_ 612 NPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQEFIPYVFQIIAFVVEQSAT 674 (959)
T ss_dssp CHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHTTCTTTHHHHHHHHHHHHHHCSS
T ss_pred chHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhCCC
Confidence 544 3344445665555544 3457788899998877766666777777777666655443
|
| >d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Lipovitellin-phosvitin complex, superhelical domain family: Lipovitellin-phosvitin complex, superhelical domain domain: Lipovitellin-phosvitin complex, superhelical domain species: Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]
Probab=90.92 E-value=4 Score=41.56 Aligned_cols=132 Identities=8% Similarity=0.166 Sum_probs=83.2
Q ss_pred HhHhHHHHHHhhcCCCcHHHHHHHHHHHHHhcccCCccchhhhHHHHHHHHhcc------CCCcceeeehhhhhcccccc
Q psy3914 431 VNEQIFQQVALGFLDTNPTIREQTVKSIIHLAPKLNYNNLNVETLRHFARLQAK------DDQGGIRTNTTVCVGKIAHH 504 (852)
Q Consensus 431 v~~~I~P~l~~g~~D~~~~iRe~tlksi~~l~~kl~~~~l~~~lL~~l~kl~~~------D~~~~IR~nt~iclgkia~~ 504 (852)
+...|.-.+..+....+..-+...||++=++- . .+.+++|.+.... +....||+.++-+|.+++.+
T Consensus 169 ~~~~l~~~l~~~~~~~~~~~~~~~LkaLGN~g----~----p~~i~~l~~~l~~~~~~~~~~~~~vR~aAi~Alr~~~~~ 240 (336)
T d1lsha1 169 LLQPLHDLLSQSSDRAKEEEIVLALKALGNAG----Q----PNSIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAKR 240 (336)
T ss_dssp GTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT----C----GGGHHHHHTTSTTSSSCCCCSCHHHHHHHHHTTTTGGGT
T ss_pred HHHHHHHHHHHhhcccchHHHHHHHHHHhccC----C----HhHHHHHHHHhcccccccccccHHHHHHHHHHHHHhhhc
Confidence 44566666666666655554555566665432 1 2345555554321 22457999999999999887
Q ss_pred cChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhccCHHHHHHhHhhhhhhcccCCChhhHHHHHHHHHHH
Q psy3914 505 LHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQYFLLSEVAQRILPALCQLSTDPEKSVRDSAFKTIKGF 579 (852)
Q Consensus 505 L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~~~~~~~a~~ILP~L~~l~~D~~~~Vr~~a~~~i~~~ 579 (852)
.+...+++|.+.|..- +-.+++|+||+..+..+.-. ..+..+|.-.+ -.|++.+|+.-....|+.+
T Consensus 241 -~p~~v~~~l~~i~~n~--~e~~EvRiaA~~~lm~t~P~---~~~l~~i~~~l---~~E~~~QV~sfv~S~l~~l 306 (336)
T d1lsha1 241 -DPRKVQEIVLPIFLNV--AIKSELRIRSCIVFFESKPS---VALVSMVAVRL---RREPNLQVASFVYSQMRSL 306 (336)
T ss_dssp -CHHHHHHHHHHHHHCT--TSCHHHHHHHHHHHHHTCCC---HHHHHHHHHHH---TTCSCHHHHHHHHHHHHHH
T ss_pred -CcHHHHHHHHHHHcCC--CCChHHHHHHHHHHHhcCCC---HHHHHHHHHHH---HhCcHHHHHHHHHHHHHHH
Confidence 4666788888988873 33478999999988765322 22333333333 3688888876665555554
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=85.55 E-value=0.12 Score=52.62 Aligned_cols=30 Identities=13% Similarity=0.073 Sum_probs=26.8
Q ss_pred CCceecccCCCCEEEccCCcEEEcccchhh
Q psy3914 181 ADLRHNHVNHTSIFINSCGEWKLGGLEYME 210 (852)
Q Consensus 181 ~~ivH~DIkp~NIlV~~~g~~KL~DFg~a~ 210 (852)
.|+||+|+.++||+++.++..-|+||+.++
T Consensus 183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 183 AGVIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cccccCCcchhhhhcccccceeEecccccc
Confidence 468999999999999988777899999986
|
| >d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Exportin Cse1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=80.02 E-value=4.7 Score=45.86 Aligned_cols=130 Identities=9% Similarity=-0.024 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHccCChHHHhHhHHHHHHhhc----C--CCcHHHHHHHHHHHHHhcccCCcc-----------chhhhH
Q psy3914 412 RSRLLLQLEHFIGHVPDAIVNEQIFQQVALGF----L--DTNPTIREQTVKSIIHLAPKLNYN-----------NLNVET 474 (852)
Q Consensus 412 R~~LL~~L~~~~~~l~~~~v~~~I~P~l~~g~----~--D~~~~iRe~tlksi~~l~~kl~~~-----------~l~~~l 474 (852)
|.+...-+..+..+.. +.+...+++.+...+ . +.++..|++++..+-.++.+.+.. .+..-+
T Consensus 378 r~~a~~ll~~l~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l 456 (959)
T d1wa5c_ 378 RRACTDFLKELKEKNE-VLVTNIFLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFF 456 (959)
T ss_dssp HHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHhcc-ccchHHHHHHHHHHHHhhccCCccchHHHHHHHHHHHHHHhhhhhhhhhhhcccchhhHHHHH
Confidence 3333333344444443 233444444444333 2 356788898887776665332211 122223
Q ss_pred HHHHHHHh-c-cCCCcceeeehhhhhcccccccChhhHHHHHHHHHHhhccCCChHHHHHHHHHHHHHhhc
Q psy3914 475 LRHFARLQ-A-KDDQGGIRTNTTVCVGKIAHHLHPQIRQKVLISAFSRAMRDPFPPARNAGVLALAATQQY 543 (852)
Q Consensus 475 L~~l~kl~-~-~D~~~~IR~nt~iclgkia~~L~~~~~~~vLi~af~r~lkDp~~~~R~a~l~~l~~~~~~ 543 (852)
.+++.-.. . .+..+.+|..++.++++.+..+.+... ..+++++...|.|+...+|..|..++..+...
T Consensus 457 ~~~v~~~l~~~~~~~~~lr~~~~~~i~~~~~~~~~~~~-~~~~~~l~~~L~~~~~~V~~~a~~al~~~~~~ 526 (959)
T d1wa5c_ 457 TKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQLTKAQL-IELMPILATFLQTDEYVVYTYAAITIEKILTI 526 (959)
T ss_dssp HHHTHHHHHCSSCSCHHHHHHHHHHHHHTGGGSCHHHH-HHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHccCCCchHHHHHHHHHHHHHHHhhccHHHH-HHHHHHHHHHhCCCchhHHHHHHHHHHHHHHh
Confidence 33322211 1 345677899999999999999887654 45667888899999999999999999877653
|