Diaphorina citri psyllid: psy3942


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
VAAQAGNQEEGEKLIDSTLSRIKGSSKEEGEKLIDLTLSRIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPGFTP
cccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccHHHccccccEEEEEccccHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHccccccEEEEccccccccccEEEEEccccccHHHHHHHHHHHHHccccEEEEcccccccc
VAAQAGNQEEGEKLIDSTLS***************LTLSRIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPGFTP
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VAAQAGNQEEGEKLIDSTLSRIKGSSKEEGEKLIDLTLSRIKGSSKVEDSVSQSDLVIEAIVENMDIKHKLFTSVDKIAPASAILASNTSSLSITEIASVTNRKDKFVGLHFFNPVPMMKLLEVIRTNDTSDATYNAVTEWGKSIGKTTIVCKDTPGFTP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
3-hydroxybutyryl-CoA dehydrogenase confidentP45364
Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial Plays an essential role in the mitochondrial beta-oxidation of short chain fatty acids. Exerts it highest activity toward 3-hydroxybutyryl-CoA.confidentP00348
3-hydroxybutyryl-CoA dehydrogenase confidentP77851

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0044429 [CC]mitochondrial partprobableGO:0005737, GO:0005575, GO:0043231, GO:0044464, GO:0043229, GO:0005739, GO:0005622, GO:0044446, GO:0044444, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0005618 [CC]cell wallprobableGO:0005575, GO:0071944, GO:0044464, GO:0005623, GO:0030312
GO:0016020 [CC]membraneprobableGO:0005575
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0050896 [BP]response to stimulusprobableGO:0008150
GO:0006635 [BP]fatty acid beta-oxidationprobableGO:0034440, GO:0006631, GO:0019752, GO:0044248, GO:0009062, GO:0044281, GO:0044282, GO:0044242, GO:0044712, GO:1901575, GO:0030258, GO:0016042, GO:0071704, GO:0006629, GO:0009987, GO:0044710, GO:0032787, GO:0008150, GO:0008152, GO:0072329, GO:0043436, GO:0019395, GO:0044255, GO:0009056, GO:0055114, GO:0044238, GO:0006082, GO:0046395, GO:0016054, GO:0044237
GO:0016836 [MF]hydro-lyase activityprobableGO:0016835, GO:0016829, GO:0003674, GO:0003824
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3MOG, chain A
Confidence level:very confident
Coverage over the Query: 2-160
View the alignment between query and template
View the model in PyMOL