Diaphorina citri psyllid: psy3966

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390--
MSYNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVKNEDMMKKVLLG
cccccccccccccccccccccccccEECccccccccccHHHHHccccccccccccccccEEEccccccccccHHHcccccccEEEccccccccccHHHccccccEEEccccccccccccHHHHccccccEEEccccccccccHHHcccccccEEEccccccccccHHHHccccccEEEccccccccccHHHHccccccEEEccccccccccHHHccccccccccccccccccccHHHHHcccccccccEEEccccccccccHHHHccccccEEEccccccccccccccccccccHHHHcccccccccccHHHccccHHHHHHHHHcccccccccccccccccCEEEEEEEccccccccHHHHcccccccccccccccccccccccHHHcccc
*****G********DSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSP*VMYGD******MKKVLLG
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MSYNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVKNEDMMKKVLLG

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Leucine-rich repeat-containing protein 58 confidentQ96CX6
Leucine-rich repeat-containing protein 58 confidentA4IHG1
Leucine-rich repeat-containing protein 58 confidentQ3UGP9

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005911 [CC]cell-cell junctionprobableGO:0005575, GO:0030054
GO:0006468 [BP]protein phosphorylationprobableGO:0044267, GO:0044260, GO:0044238, GO:0019538, GO:0016310, GO:0009987, GO:0043412, GO:0006464, GO:0043170, GO:0071704, GO:0006796, GO:0036211, GO:0008150, GO:0044237, GO:0008152, GO:0006793
GO:0044763 [BP]single-organism cellular processprobableGO:0009987, GO:0008150, GO:0044699
GO:0043234 [CC]protein complexprobableGO:0005575, GO:0032991
GO:0003824 [MF]catalytic activityprobableGO:0003674
GO:0044459 [CC]plasma membrane partprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0045202 [CC]synapseprobableGO:0005575
GO:0044707 [BP]single-multicellular organism processprobableGO:0032501, GO:0008150, GO:0044699
GO:0044446 [CC]intracellular organelle partprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043226, GO:0044422
GO:0044444 [CC]cytoplasmic partprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3RGZ, chain A
Confidence level:very confident
Coverage over the Query: 18-290
View the alignment between query and template
View the model in PyMOL
Template: 3GOZ, chain A
Confidence level:very confident
Coverage over the Query: 26-295
View the alignment between query and template
View the model in PyMOL