Diaphorina citri psyllid: psy4002

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
MERRSMKNKTLTVPVDTTKNGKQKRMHMVVKYDEPKFQQTRCQLEKNIALNNPLDDKEHNDNKTQNKKNTLYKSEKLGKRTLLKKQNVHNKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRKS
ccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccHHHHHcccccHHHHcccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHcccHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHccccccHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHcccccccEEcHHHHHHHcccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHccccccccc
***********************************************************************************************************AHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC********************
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MERRSMKNKTLTVPVDTTKNGKQKRMHMVVKYDEPKFQQTRCQLEKNIALNNPLDDKEHNDNKTQNKKNTLYKSEKLGKRTLLKKQNVHNKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRKS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Endonuclease III-like protein 1 Has both an apurinic and/or apyrimidinic endonuclease activity and a DNA N-glycosylase activity. Incises damaged DNA at cytosines, thymines and guanines. Acts on a damaged strand, 5' from the damaged site. Required for the repair of both oxidative DNA damage and spontaneous mutagenic lesions.confidentO35980

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0006285 [BP]base-excision repair, AP site formationprobableGO:0044238, GO:0090304, GO:0034641, GO:0006807, GO:1901360, GO:1901361, GO:0006139, GO:1901575, GO:0044265, GO:0044260, GO:0006308, GO:0071704, GO:0044699, GO:0006284, GO:0006281, GO:0009987, GO:0006725, GO:0051716, GO:0046700, GO:0006974, GO:0006259, GO:0006950, GO:0008150, GO:0008152, GO:0034655, GO:0009056, GO:0009057, GO:0046483, GO:0044248, GO:0044270, GO:0050896, GO:0044237, GO:0043170, GO:0033554, GO:0019439, GO:0044763
GO:0006296 [BP]nucleotide-excision repair, DNA incision, 5'-to lesionprobableGO:0090304, GO:0090305, GO:0034641, GO:0006807, GO:1901360, GO:0006139, GO:0051716, GO:0044260, GO:0033683, GO:0071704, GO:0044699, GO:0006281, GO:0009987, GO:0006725, GO:0006289, GO:0006974, GO:0006950, GO:0044763, GO:0008152, GO:0046483, GO:0044238, GO:0050896, GO:0044237, GO:0043170, GO:0033554, GO:0006259, GO:0008150
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0003690 [MF]double-stranded DNA bindingprobableGO:0043566, GO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0019104 [MF]DNA N-glycosylase activityprobableGO:0016787, GO:0003674, GO:0016799, GO:0016798, GO:0003824
GO:0003906 [MF]DNA-(apurinic or apyrimidinic site) lyase activityprobableGO:0016835, GO:0016829, GO:0003674, GO:0003824

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
4.-.-.-Lyases.probable
4.2.-.-Carbon-oxygen lyases.probable
4.2.99.-Other carbon-oxygen lyases.probable
4.2.99.18Transferred entry: 4.2.99.18.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1ORN, chain A
Confidence level:very confident
Coverage over the Query: 108-127,142-251,288-364
View the alignment between query and template
View the model in PyMOL