Diaphorina citri psyllid: psy4067

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380----

MLAEEQKNSVGPHFSCSMTLKHHPIGTPGPAYIFFLLEGLQAILFLPLFKQVDFGDSKVVSLRELLSHVTYQKRLYRLTVQPNWLGTVKAVHGTYLTMVTDETSKLKDSPEIRDKWKLVLSFLKEKGLVKPHIDSFDYFINVEIKKLMQANANIYSDVDPLFYLKYLDIHVGIADKIIPKIKAAQFDIVNHMRQDTITNALTAAIQTGNWTIRRFKMERQGVTQVLSRLSYISGLGMMTRINSQFEKTRKVSGPRSLQGSQWGMLCPSDTPEGEACGLVKNLALMTHITTENDEKNMLKIMYNIGIEHIAMFNGEELSSPGVYLVFVNGILAGITCHHKEVCKPEIEESFNYTRQTTPHECRLRDLTYSAPITVDIEYTRGSQRVVRSDLVIGRMPIMLQSSKCVLRNKTEYTSSSRRASTSSVTMHSQRTSPLLSCKKLRQKRFQTYKKTPVDDARDFLSSTCIAHIPVINMRFKMKAMYLAVMIRRMVLALSDPDMLDDRDYYGNKRLELAGSLLSLMFEDVFKRFNSELKETNLSGVVNLVSGWWFELKYGNKIYIRSPSRKLLAAGFSGPHSGRVRLMPEGPTILLNSCLRSGGKAQHEALYNAVQRHATKCCTLNFLFFLGGGGILPSIQRQTTCLLTLILFSLNGDGKRGARNSQQYCDCPDGYSSGCQPRPTFLNMHQFLGFKRFDDFLYEGKIEYLDVNEGNDSHIAVSESGIRPGVTTHLEIAPFTLLGVCAGIELLQYNKRFHSPGLVPYPHHNQAPRNTYQCAMGKQAMGCIGYNQQNRIDTLMYNLVYAQRPMVESKTIRITNFHKLPAGKCQISPGGAEELTARESCHEVLKIISFSISVAVFDSVWLGDVKQGVHQLSEEKEPRLLRKFQYFDVRTPYRLRRLLCWECVLYNKRFHSPGLVPYPHHNQAPRNTYQCAMGKQAMGCIGYNQQNRIDTLMYNLVYAQRPMVESKTIRITNFHKLPAGQNATIAVMSYSGYDIEDALIMNKASLDRGFGRCLVYRNSKCVLKQYPNQTHDRILGPLLEADTRKPVYRHRALDQDGIVAPGEQICERQVLVNKSMPTISVSAISMATPEYKEVPVSYKGSVPSYLEKVLVSSNSEDAFLIKMLLRQTRRPEIGDKFSSRHGQKGVIGLIVEQEDMPFNESGICPDIIMNPHGLKGCDRITEYKEVPVSYKGSVPSYLEKVLVSSNSEDAFLIKMLLRQTRRPEIGDKFSSRHGQKGVIGLIVEQEDMPFNESGICPDIIMNPHGYPSRMTVGKLIELLAGKAGLMEGNYKEGTAFGGTKLVDVQEELIRHGYNYQGKDIFYSGITGEALEAYIYSGPVYYQKLKHMVQDKIHARSRGPRVVLTRQPTGRRWKLTFTPALCTIRS

ccccccccCEEEEEccEEEEECccccccccEEEEEEcccccccccccccccccccccccccHHHHHHHHHccccccccccccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccHHHccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHcccccccccccEEcccEEEccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHcccccccccccccHHHHHHHHHHcccEEccccccccccccccEEEEEccEEEEEECcccccccccHHHHHccccccccCEEEEEcccccccEEEEEEEECccCEEECccEEEccccccccccccccccccHHcccccHHHccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccHHcHHHHHHHHHHHHHHHHHHHHHHHHccccEEccccHHHHHHcccCEEEEccccCCcccccccccccccccccccccCEEccccccccccHHcccccEEEccccccccccEEEEEccccccccccccccHHHEEEEEEECccccccEEEcECccccccccccccccccEEEEEECccccccHHHHHHcccEEccccccccccccccccccccccccCEEECcccEEEEEEEccEEEEccccccccccccccccccccccCEEEccccccccccccccccccccccEEEEEccccccccHHHHHHccccccccccccccccccccccccccccEEEEEEccccccccEEEEEccccccccccccccccHHccccccccccccccccccEEEEEEECcccccccccccccccccccccHHcccccHcccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccHHHHHcccccccccccEEEEEEEEEEEEcccccccEEEcccccccccccccccccccccccccccccEEccccEEEEEEcccccccccccccccccEEEECccccccEEEEEEEEEEcccccEEEEEEEcccccccccccccccccccccccEEEccccccccccccccccccccccccccccccCEEECccccccccccEEEEEEEcccccccEEEEEEEEEccccccccccccccccCEEEEEECcccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccc

**********GPHFSCSMTLKHHPIGTPGPAYIFFLLEGLQAILFLPLFKQVDFGDSKVVSLRELLSHVTYQKRLYRLTVQPNWLGTVKAVHGTYLTMVTDETSKLKDSPEIRDKWKLVLSFLKEKGLVKPHIDSFDYFINVEIKKLMQANANIYSDVDPLFYLKYLDIHVGIADKIIPKIKAAQFDIVNHMRQDTITNALTAAIQTGNWTIRRFKMERQGVTQVLSRLSYISGLGMMTRIN*************SLQGSQWGMLCPSDTPEGEACGLVKNLALMTHITTENDEKNMLKIMYNIGIEHIAMFNGEELSSPGVYLVFVNGILAGITCHHKEVCKPEIEESFNYTRQTTPHECRLRDLTYSAPITVDIEYTRGSQRVVRSDLVIGRMPIMLQSSKCVLRNKTEYTSSSRRASTSSVTMHSQRTSPLLSC*******FQTYKKTPVDDARDFLSSTCIAHIPVINMRFKMKAMYLAVMIRRMVLALSDPDMLDDRDYYGNKRLELAGSLLSLMFEDVFKRFNSELKETNLSGVVNLVSGWWFELKYGNKIYIRSPSRKLLAAGFSGPHSGRVRLMPEGPTILLNSCLRSGGKAQHEALYNAVQRHATKCCTLNFLFFLGGGGILPSIQRQTTCLLTLILFSLNGDGKRGARNSQQYCDCPDGYSSGCQPRPTFLNMHQFLGFKRFDDFLYEGKIEYLDVNEGNDSHIAVSESGIRPGVTTHLEIAPFTLLGVCAGIELLQYNKRFHSPGLVPYPHHNQAPRNTYQCAMGKQAMGCIGYNQQNRIDTLMYNLVYAQRPMVESKTIRITNFHKLPAGKCQISPGGAEELTARESCHEVLKIISFSISVAVFDSVWLGDVKQGVHQLSEE****LLRKFQYFDVRTPYRLRRLLCWECVLYNKRFHSPGLVPYPHHNQAPRNTYQCAMGKQAMGCIGYNQQNRIDTLMYNLVYAQRPMVESKTIRITNFHKLPAGQNATIAVMSYSGYDIEDALIMNKASLDRGFGRCLVYRNSKCVLKQYPNQTHDRILGPLLEADTRKPVYRHRALDQDGIVAPGEQICERQVLVNKSMPTISVSAISMATPEYKEVPVSYKGSVPSYLEKVLVSSNSEDAFLIKMLLRQTRRPEIGDKFSSRHGQKGVIGLIVEQEDMPFNESGICPDIIMNPHGLKGCDRITEYKEVPVSYKGSVPSYLEKVLVSSNSEDAFLIKMLLRQTRRPEIGDKFSSRHGQKGVIGLIVEQEDMPFNESGICPDIIMNPHGYPSRMTVGKLIELLAGKAGLMEGNYKEGTAFGGTKLVDVQEELIRHGYNYQGKDIFYSGITGEALEAYIYSGPVYYQKLKHMVQDKIHARSRGPRVVLTRQPTGRRWKLTFTPALCTIR*

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0003899 [MF]	DNA-directed RNA polymerase activity	probable	GO:0016779, GO:0016772, GO:0034062, GO:0003824, GO:0016740, GO:0003674
GO:0003677 [MF]	DNA binding	probable	GO:0097159, GO:0003674, GO:1901363, GO:0003676, GO:0005488
GO:0006351 [BP]	transcription, DNA-dependent	probable	GO:0032774, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0034645, GO:1901362, GO:1901360, GO:1901576, GO:0044260, GO:0071704, GO:0010467, GO:0018130, GO:0006139, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0034654, GO:0046483, GO:0016070, GO:0044238, GO:0044271, GO:0044237, GO:0043170, GO:0019438
GO:0032549 [MF]	ribonucleoside binding	probable	GO:0097159, GO:0036094, GO:0003674, GO:0005488, GO:1901363, GO:0001882

Prediction of Enzyme Commission Number

EC Number	Description	Confidence Level
2.-.-.-	Transferases.	probable
2.7.-.-	Transferring phosphorous-containing groups.	probable
2.7.7.-	Nucleotidyltransferases.	probable
2.7.7.6	DNA-directed RNA polymerase.	probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3H0G, chain B
Confidence level:very confident
Coverage over the Query: 339-685
View the alignment between query and template
View the model in PyMOL

Template: 1TWF, chain B
Confidence level:very confident
Coverage over the Query: 39-116,129-354,387-397,412-428,554-562,576-614,651-665,689-742,757-811,969-1078,1181-1358
View the alignment between query and template
View the model in PyMOL

Template: 4AYB, chain B
Confidence level:very confident
Coverage over the Query: 339-614,629-630,647-673,688-701,714-742,757-781,798-850,867-869,882-893,908-966
View the alignment between query and template
View the model in PyMOL

Template: 1I3Q, chain B
Confidence level:confident
Coverage over the Query: 911-1173
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID	Alignment Graph	Confidence Level	View Alignment and Template
Query
3lu0, chain C		very confident	Alignment \| Template Structure