Diaphorina citri psyllid: psy4101


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--
MGMLRHRPQASNVILSAGTIGSPQILMISGIGPKDHLQDMGIPVIHDLRVGDNLQDHVGMAGLTFLVDKPVSIVQNRLQVSL
cccEEEEEcccEEEEcccccccHHHHHccccccHHHHHHcccccCECccccccccccccccCEEEEEcccEEEEcccccccc
*G*LRHRPQASNVILSAGTIGSPQILMISGIGPKDHLQDMGIPVIHDLRVGDNLQDHVGMAGLTFLVDKPVSIVQ*RLQVS*
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MGMLRHRPQASNVILSAGTIGSPQILMISGIGPKDHLQDMGIPVIHDLRVGDNLQDHVGMAGLTFLVDKPVSIVQNRLQVSL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Choline dehydrogenase Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.confidentQ88AE7
Choline dehydrogenase Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.confidentB0V945
Choline dehydrogenase Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.confidentB7GYG5

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0016614 [MF]oxidoreductase activity, acting on CH-OH group of donorsprobableGO:0003824, GO:0003674, GO:0016491
GO:0042600 [CC]chorionprobableGO:0005575, GO:0071944, GO:0044464, GO:0005623, GO:0030312
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0007275 [BP]multicellular organismal developmentprobableGO:0032502, GO:0032501, GO:0008150, GO:0044699, GO:0044707
GO:0050660 [MF]flavin adenine dinucleotide bindingprobableGO:0043168, GO:0050662, GO:0097159, GO:0043167, GO:0036094, GO:0048037, GO:0005488, GO:0003674, GO:0000166, GO:1901363, GO:1901265
GO:0071704 [BP]organic substance metabolic processprobableGO:0008150, GO:0008152
GO:0048856 [BP]anatomical structure developmentprobableGO:0032502, GO:0008150

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3T37, chain A
Confidence level:very confident
Coverage over the Query: 4-71
View the alignment between query and template
View the model in PyMOL